Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
NRAS	0	genome.wustl.edu	37	1	115256530	115256530	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	115256530	115256530	G	T	SNP	NRAS	ENST00000369535	human	ensembl	74_37	-1	known	missense	c.181	p.Q61K	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	NRAS	HGNC	ENSG00000213281				98	0	0	63	18	22.2222
HAO2	0	genome.wustl.edu	37	1	119929380	119929380	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	119929380	119929380	G	A	SNP	HAO2	ENST00000361035	human	ensembl	74_37	+1	known	missense	c.736	p.A246T	1.000	pfam_FMN-dep_DH,pirsf_Alpha-hydoxy_acid_DH_FMN	pfam_FMN-dep_DH,pfam_IMP_DH_GMPRt,pfam_Glu_synth_centr_C,pirsf_Alpha-hydoxy_acid_DH_FMN	-	no_errors	HAO2	HGNC	ENSG00000116882				77	0	0	31	12	27.907
PDE4DIP	0	genome.wustl.edu	37	1	145075943	145075943	+	RNA	SNP	C	C	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	145075943	145075943	C	A	SNP	PDE4DIP	ENST00000528552	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.118	-	-	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				21	0	0	32	9	21.9512
LINGO4	0	genome.wustl.edu	37	1	151774881	151774881	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	151774881	151774881	C	A	SNP	LINGO4	ENST00000368820	human	ensembl	74_37	-1	known	missense	c.300	p.E100D	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO4	HGNC	ENSG00000213171				56	0	0	110	28	20.2899
APOA1BP	0	genome.wustl.edu	37	1	156563272	156563272	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	156563272	156563272	C	G	SNP	APOA1BP	ENST00000368235	human	ensembl	74_37	+1	known	missense	c.589	p.R197G	1.000	pfam_YjeF_N_dom,superfamily_YjeF_N_dom,tigrfam_YjeF_N_dom	pfam_YjeF_N_dom,superfamily_YjeF_N_dom,tigrfam_YjeF_N_dom	-	no_errors	APOA1BP	HGNC	ENSG00000163382				60	0	0	97	11	10.1852
KCNK2	0	genome.wustl.edu	37	1	215342582	215342582	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	215342582	215342582	A	C	SNP	KCNK2	ENST00000470177	human	ensembl	74_37	+1	known	missense	c.398	p.Y133S	1.000	NULL	prints_2pore_dom_K_chnl_TREK	-	no_errors	KCNK2	HGNC	ENSG00000082482				43	0	0	30	12	28.5714
HHIPL2	0	genome.wustl.edu	37	1	222716993	222716993	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	222716993	222716993	C	T	SNP	HHIPL2	ENST00000343410	human	ensembl	74_37	-1	known	missense	c.860	p.R287H	1.000	superfamily_Quinoprot_gluc/sorb_DH	pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Quinoprot_gluc/sorb_DH,superfamily_Saposin-like	-	no_errors	HHIPL2	HGNC	ENSG00000143512				167	0	0	192	55	22.2672
GUK1	0	genome.wustl.edu	37	1	228333596	228333596	+	RNA	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	228333596	228333596	G	A	SNP	GUK1	ENST00000464858	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GUK1	HGNC	ENSG00000143774				17	0	0	28	6	17.6471
PCNXL2	0	genome.wustl.edu	37	1	233136105	233136105	+	Missense_Mutation	SNP	G	G	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	233136105	233136105	G	C	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	missense	c.5274	p.D1758E	0.066	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				105	0	0	145	42	22.4599
CCDC17	0	genome.wustl.edu	37	1	46087577	46087577	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	46087577	46087577	G	A	SNP	CCDC17	ENST00000343901	human	ensembl	74_37	-1	known	missense	c.962	p.P321L	0.372	NULL	NULL	-	no_errors	CCDC17	HGNC	ENSG00000159588				10	0	0	15	21	58.3333
PLEKHG5	0	genome.wustl.edu	37	1	6579534	6579534	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	6579534	6579534	C	T	SNP	PLEKHG5	ENST00000377748	human	ensembl	74_37	-1	known	missense	c.38	p.R13Q	0.002	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG5	HGNC	ENSG00000171680				83	0	0	60	10	14.2857
DNMBP	0	genome.wustl.edu	37	10	101715527	101715527	+	Silent	SNP	T	T	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	10	101715527	101715527	T	A	SNP	DNMBP	ENST00000342239	human	ensembl	74_37	-1	known	silent	c.1704	p.T568	0.010	NULL	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_BAR_dom,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain,prints_p67phox,prints_Spectrin_alpha_SH3	-	no_errors	DNMBP	HGNC	ENSG00000107554				69	0	0	87	23	20.9091
VIM	0	genome.wustl.edu	37	10	17276693	17276693	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	10	17276693	17276693	T	C	SNP	VIM	ENST00000224237	human	ensembl	74_37	+1	known	missense	c.884	p.F295S	1.000	pfam_IF,superfamily_Prefoldin	pfam_IF,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin	-	no_errors	VIM	HGNC	ENSG00000026025				72	0	0	90	36	28.5714
KIAA1462	0	genome.wustl.edu	37	10	30317329	30317329	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	10	30317329	30317329	A	T	SNP	KIAA1462	ENST00000375377	human	ensembl	74_37	-1	known	missense	c.1748	p.V583D	1.000	NULL	NULL	-	no_errors	KIAA1462	HGNC	ENSG00000165757				104	0	0	130	32	19.7531
ZNF503	0	genome.wustl.edu	37	10	77159095	77159095	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	10	77159095	77159095	G	A	SNP	ZNF503	ENST00000372524	human	ensembl	74_37	-1	known	silent	c.1353	p.C451	1.000	NULL	pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2	-	no_errors	ZNF503	HGNC	ENSG00000165655				28	0	0	19	7	26.9231
STAMBPL1	0	genome.wustl.edu	37	10	90682145	90682145	+	Nonsense_Mutation	SNP	T	T	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	10	90682145	90682145	T	A	SNP	STAMBPL1	ENST00000371927	human	ensembl	74_37	+1	known	nonsense	c.1206	p.C402*	1.000	NULL	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	-	no_errors	STAMBPL1	HGNC	ENSG00000138134				42	0	0	33	3	8.33333
MUC6	0	genome.wustl.edu	37	11	1016369	1016369	+	Silent	SNP	A	A	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	11	1016369	1016369	A	G	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	silent	c.6432	p.Y2144	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				18	0	0	50	7	12.2807
BIRC3	0	genome.wustl.edu	37	11	102196232	102196232	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	11	102196232	102196232	G	A	SNP	BIRC3	ENST00000263464	human	ensembl	74_37	+1	known	missense	c.889	p.G297S	1.000	pfam_BIR,smart_BIR,pfscan_BIR	pfam_BIR,pfam_CARD,superfamily_DEATH-like_dom,smart_BIR,smart_CARD,smart_Znf_RING,pfscan_CARD,pfscan_BIR,pfscan_Znf_RING	-	no_errors	BIRC3	HGNC	ENSG00000023445				138	0	0	87	24	21.6216
MMP8	0	genome.wustl.edu	37	11	102593235	102593235	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	11	102593235	102593235	C	A	SNP	MMP8	ENST00000236826	human	ensembl	74_37	-1	known	missense	c.272	p.C91F	1.000	superfamily_Peptidoglycan-bd-like,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	-	no_errors	MMP8	HGNC	ENSG00000118113				88	0	0	87	23	20.9091
KIRREL3	0	genome.wustl.edu	37	11	126294762	126294762	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	11	126294762	126294762	C	T	SNP	KIRREL3	ENST00000525144	human	ensembl	74_37	-1	known	missense	c.2050	p.G684S	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL3	HGNC	ENSG00000149571				40	0	0	78	25	24.2718
LDHC	0	genome.wustl.edu	37	11	18456456	18456456	+	Silent	SNP	T	T	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	11	18456456	18456456	T	G	SNP	LDHC	ENST00000280704	human	ensembl	74_37	+1	known	silent	c.588	p.S196	1.000	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,prints_L-lactate/malate_DH,tigrfam_L-lactate_DH	pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,prints_L-lactate/malate_DH,tigrfam_L-lactate_DH	-	no_errors	LDHC	HGNC	ENSG00000166796				53	0	0	42	10	19.2308
TNNI2	0	genome.wustl.edu	37	11	1862404	1862404	+	Missense_Mutation	SNP	C	C	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	11	1862404	1862404	C	G	SNP	TNNI2	ENST00000252898	human	ensembl	74_37	+1	known	missense	c.420	p.N140K	1.000	pfam_Troponin	pfam_Troponin	-	no_errors	TNNI2	HGNC	ENSG00000130598				47	0	0	72	14	16.2791
OR5T3	0	genome.wustl.edu	37	11	56020031	56020031	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	11	56020031	56020031	A	T	SNP	OR5T3	ENST00000303059	human	ensembl	74_37	+1	known	missense	c.356	p.N119I	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T3	HGNC	ENSG00000172489				84	0	0	87	17	16.3462
CDC42BPG	0	genome.wustl.edu	37	11	64603960	64603960	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	11	64603960	64603960	G	T	SNP	CDC42BPG	ENST00000342711	human	ensembl	74_37	-1	known	missense	c.1427	p.P476H	0.018	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219				96	0	0	150	45	23.0769
MYBPC1	0	genome.wustl.edu	37	12	102069076	102069076	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	12	102069076	102069076	C	T	SNP	MYBPC1	ENST00000361466	human	ensembl	74_37	+1	known	missense	c.2816	p.P939L	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC1	HGNC	ENSG00000196091				26	0	0	7	4	36.3636
CAPRIN2	0	genome.wustl.edu	37	12	30887968	30887968	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	12	30887968	30887968	G	A	SNP	CAPRIN2	ENST00000251071	human	ensembl	74_37	-1	known	missense	c.743	p.S248L	1.000	NULL	pfam_Caprin-1_C,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CAPRIN2	HGNC	ENSG00000110888				107	0	0	55	35	38.8889
AMIGO2	0	genome.wustl.edu	37	12	47471346	47471346	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	12	47471346	47471346	G	A	SNP	AMIGO2	ENST00000266581	human	ensembl	74_37	-1	known	silent	c.1440	p.N480	0.995	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	AMIGO2	HGNC	ENSG00000139211				21	0	0	37	15	28.8462
ARHGEF25	0	genome.wustl.edu	37	12	58006728	58006728	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	12	58006728	58006728	C	T	SNP	ARHGEF25	ENST00000333972	human	ensembl	74_37	+1	known	missense	c.230	p.A77V	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF25	HGNC	ENSG00000240771				142	0	0	235	73	23.7013
CCDC169-SOHLH2	0	genome.wustl.edu	37	13	36776025	36776025	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	13	36776025	36776025	T	C	SNP	CCDC169-SOHLH2	ENST00000511166	human	ensembl	74_37	-1	known	missense	c.485	p.K162R	0.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	CCDC169-SOHLH2	HGNC	ENSG00000250709				28	0	0	36	14	28
OR11H12	0	genome.wustl.edu	37	14	19377832	19377832	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	14	19377832	19377832	A	G	SNP	OR11H12	ENST00000550708	human	ensembl	74_37	+1	known	missense	c.239	p.N80S	0.030	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR11H12	HGNC	ENSG00000257115				132	0	0	124	19	13.2867
ADCY4	0	genome.wustl.edu	37	14	24788626	24788626	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	14	24788626	24788626	T	C	SNP	ADCY4	ENST00000310677	human	ensembl	74_37	-1	known	missense	c.2750	p.K917R	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY4	HGNC	ENSG00000129467				83	0	0	45	21	31.8182
MIR1260A	0	genome.wustl.edu	37	14	77732630	77732630	+	RNA	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	14	77732630	77732630	G	A	SNP	MIR1260A	ENST00000408827	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR1260A	HGNC	ENSG00000221754				46	0	0	53	23	30.2632
SNORD64	0	genome.wustl.edu	37	15	25230169	25230169	+	RNA	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	15	25230169	25230169	G	A	SNP	SNORD64	ENST00000605533	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SNORD64	HGNC	ENSG00000270704				14	0	0	12	4	25
HIGD2B	0	genome.wustl.edu	37	15	72968542	72968542	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	15	72968542	72968542	G	A	SNP	HIGD2B	ENST00000311755	human	ensembl	74_37	-1	known	silent	c.174	p.A58	0.998	pfam_Hypoxia_induced_domain	pfam_Hypoxia_induced_domain	-	no_errors	HIGD2B	HGNC	ENSG00000175202				14	0	0	16	4	20
SEMA4B	0	genome.wustl.edu	37	15	90770820	90770820	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	15	90770820	90770820	G	A	SNP	SEMA4B	ENST00000332496	human	ensembl	74_37	+1	known	missense	c.1720	p.A574T	0.010	superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4B	HGNC	ENSG00000185033				27	0	0	53	17	24.2857
SRCAP	0	genome.wustl.edu	37	16	30732220	30732220	+	Silent	SNP	C	C	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	16	30732220	30732220	C	G	SNP	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	silent	c.3174	p.P1058	0.967	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603				103	0	0	124	30	19.4805
CDH13	0	genome.wustl.edu	37	16	83251091	83251091	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	16	83251091	83251091	G	T	SNP	CDH13	ENST00000566620	human	ensembl	74_37	+1	known	missense	c.625	p.A209S	0.967	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH13	HGNC	ENSG00000140945				41	0	0	40	15	27.2727
MAP2K3	0	genome.wustl.edu	37	17	21203934	21203934	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	17	21203934	21203934	G	A	SNP	MAP2K3	ENST00000342679	human	ensembl	74_37	+1	known	silent	c.243	p.V81	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K3	HGNC	ENSG00000034152				15	0	0	10	8	44.4444
CRYBA1	0	genome.wustl.edu	37	17	27581338	27581338	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	17	27581338	27581338	A	T	SNP	CRYBA1	ENST00000225387	human	ensembl	74_37	+1	known	missense	c.619	p.I207F	1.000	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBA1	HGNC	ENSG00000108255				66	0	0	88	23	20.7207
PIP4K2B	0	genome.wustl.edu	37	17	36934602	36934602	+	Silent	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	17	36934602	36934602	C	T	SNP	PIP4K2B	ENST00000269554	human	ensembl	74_37	-1	known	silent	c.678	p.A226	0.619	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP4K2B	HGNC	ENSG00000141720				167	0	0	618	84	11.9658
TP53	0	genome.wustl.edu	37	17	7578394	7578394	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	17	7578394	7578394	T	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.536	p.H179R	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				71	0	0	65	26	28.5714
PIK3C3	0	genome.wustl.edu	37	18	39573270	39573270	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	18	39573270	39573270	G	A	SNP	PIK3C3	ENST00000262039	human	ensembl	74_37	+1	known	missense	c.751	p.E251K	1.000	pirsf_PI3K_Vps34	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pirsf_PI3K_Vps34,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C3	HGNC	ENSG00000078142				34	0	0	15	5	25
ENSG00000267174	0	genome.wustl.edu	37	19	11411868	11411868	+	RNA	SNP	C	C	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	19	11411868	11411868	C	A	SNP	ENSG00000267174	ENST00000585801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTC-510F12.4	Clone_based_vega_gene	ENSG00000267174				48	0	0	28	3	9.67742
ZNF681	0	genome.wustl.edu	37	19	23937635	23937635	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	19	23937635	23937635	G	A	SNP	ZNF681	ENST00000402377	human	ensembl	74_37	-1	known	silent	c.216	p.A72	0.243	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF681	HGNC	ENSG00000196172				59	0	0	53	11	17.1875
CNTNAP5	0	genome.wustl.edu	37	2	125555790	125555790	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	125555790	125555790	C	T	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.3107	p.S1036F	0.992	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052				28	0	0	37	11	22.9167
LRP2	0	genome.wustl.edu	37	2	170063039	170063039	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	170063039	170063039	G	A	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	silent	c.7191	p.S2397	0.995	NULL	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				44	0	0	69	12	14.8148
AGPS	0	genome.wustl.edu	37	2	178364413	178364413	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	178364413	178364413	T	C	SNP	AGPS	ENST00000264167	human	ensembl	74_37	+1	known	missense	c.1430	p.V477A	1.000	pfam_FAD-linked_oxidase_C,superfamily_FAD-linked_Oxase-like_C	pfam_FAD-linked_oxidase_C,pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2,superfamily_FAD-linked_Oxase-like_C	-	no_errors	AGPS	HGNC	ENSG00000018510				59	0	0	22	10	31.25
TTN	0	genome.wustl.edu	37	2	179476671	179476671	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	179476671	179476671	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.42661	p.E14221K	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				26	0	0	42	14	25
ASNSD1	0	genome.wustl.edu	37	2	190532126	190532126	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	190532126	190532126	G	A	SNP	ASNSD1	ENST00000260952	human	ensembl	74_37	+1	known	missense	c.1268	p.R423Q	0.748	pfam_Asn_synthase	pfam_Asn_synthase	-	no_errors	ASNSD1	HGNC	ENSG00000138381				40	0	0	19	11	36.6667
NABP1	0	genome.wustl.edu	37	2	192550460	192550460	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	192550460	192550460	A	G	SNP	NABP1	ENST00000425611	human	ensembl	74_37	+1	known	missense	c.581	p.N194S	1.000	NULL	pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold	-	no_errors	NABP1	HGNC	ENSG00000173559				25	0	0	12	5	29.4118
COL6A3	0	genome.wustl.edu	37	2	238289897	238289897	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	238289897	238289897	C	T	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.1558	p.G520S	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				128	0	0	164	61	27.1111
NRXN1	0	genome.wustl.edu	37	2	50724691	50724691	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	50724691	50724691	C	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.2635	p.D879N	1.000	pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				24	0	0	32	6	15.7895
MPHOSPH10	0	genome.wustl.edu	37	2	71360625	71360625	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	71360625	71360625	G	T	SNP	MPHOSPH10	ENST00000244230	human	ensembl	74_37	+1	known	missense	c.687	p.E229D	0.004	pfam_Mpp10,pirsf_snoRNP_Mpp10	pfam_Mpp10,pirsf_snoRNP_Mpp10	-	no_errors	MPHOSPH10	HGNC	ENSG00000124383				48	0	0	36	4	10
ENSG00000240040	0	genome.wustl.edu	37	2	89117933	89117933	+	RNA	SNP	A	A	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	2	89117933	89117933	A	T	SNP	ENSG00000240040	ENST00000434790	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.919	-	-	-	no_errors	AC096579.13	Clone_based_vega_gene	ENSG00000240040				10	0	0	18	3	14.2857
FLRT3	0	genome.wustl.edu	37	20	14307252	14307252	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	20	14307252	14307252	T	G	SNP	FLRT3	ENST00000341420	human	ensembl	74_37	-1	known	missense	c.901	p.I301L	1.000	NULL	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT3	HGNC	ENSG00000125848				44	0	0	54	17	23.9437
TSHZ2	0	genome.wustl.edu	37	20	51871474	51871474	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	20	51871474	51871474	G	A	SNP	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	missense	c.1477	p.D493N	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463				52	0	0	94	18	16.0714
PCK1	0	genome.wustl.edu	37	20	56139227	56139227	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	20	56139227	56139227	C	A	SNP	PCK1	ENST00000319441	human	ensembl	74_37	+1	known	missense	c.964	p.H322N	0.998	pfam_PEP_carboxykinase_GTP,pirsf_PEP_carboxykinase_GTP	pfam_PEP_carboxykinase_GTP,superfamily_PEP_carboxykinase_N,pirsf_PEP_carboxykinase_GTP	-	no_errors	PCK1	HGNC	ENSG00000124253				37	0	0	50	10	16.6667
CDH4	0	genome.wustl.edu	37	20	60485616	60485616	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	20	60485616	60485616	G	A	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	missense	c.1327	p.V443I	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242				58	0	0	87	36	29.2683
TMPRSS15	0	genome.wustl.edu	37	21	19653413	19653413	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	21	19653413	19653413	C	T	SNP	TMPRSS15	ENST00000284885	human	ensembl	74_37	-1	known	missense	c.2612	p.R871Q	0.679	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_CUB_dom,pfam_MAM_dom,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_Peptidase_S1A_nudel,pfam_SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_ConA-like_lec_gl_sf,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_MAM_dom,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,pfscan_SEA_dom,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS15	HGNC	ENSG00000154646				89	0	0	49	16	24.6154
C21orf62	0	genome.wustl.edu	37	21	34166192	34166192	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	21	34166192	34166192	A	G	SNP	C21orf62	ENST00000479548	human	ensembl	74_37	-1	known	missense	c.541	p.F181L	0.018	NULL	NULL	-	no_errors	C21orf62	HGNC	ENSG00000205929				48	0	0	44	4	8.33333
UMODL1	0	genome.wustl.edu	37	21	43547788	43547788	+	Silent	SNP	T	T	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	21	43547788	43547788	T	C	SNP	UMODL1	ENST00000408989	human	ensembl	74_37	+1	known	silent	c.3921	p.P1307	0.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,pfam_SEA_dom,pfam_EGF-like_Ca-bd_dom,pfam_EMI_domain,pfam_WAP-type_4-diS_core,superfamily_Fibronectin_type3,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_EGF-like_Ca-bd_dom,smart_Fibronectin_type3,smart_ZP_dom,pfscan_EG-like_dom,pfscan_EMI_domain,pfscan_Fibronectin_type3,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	UMODL1	HGNC	ENSG00000177398				29	0	0	42	3	6.66667
KIAA1524	0	genome.wustl.edu	37	3	108276170	108276170	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	108276170	108276170	C	T	SNP	KIAA1524	ENST00000295746	human	ensembl	74_37	-1	known	missense	c.2105	p.R702K	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	KIAA1524	HGNC	ENSG00000163507				27	0	0	27	10	27.027
KIAA1524	0	genome.wustl.edu	37	3	108298465	108298465	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	108298465	108298465	A	C	SNP	KIAA1524	ENST00000295746	human	ensembl	74_37	-1	known	missense	c.620	p.F207C	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA1524	HGNC	ENSG00000163507				26	0	0	12	3	20
MRPL47	0	genome.wustl.edu	37	3	179319544	179319544	+	Missense_Mutation	SNP	T	T	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	179319544	179319544	T	G	SNP	MRPL47	ENST00000476781	human	ensembl	74_37	-1	known	missense	c.279	p.K93N	1.000	pfam_Ribosomal_L47_mit	pfam_Ribosomal_L47_mit	-	no_errors	MRPL47	HGNC	ENSG00000136522				25	0	0	26	8	23.5294
PEX5L	0	genome.wustl.edu	37	3	179576923	179576923	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	179576923	179576923	C	T	SNP	PEX5L	ENST00000467460	human	ensembl	74_37	-1	known	missense	c.749	p.R250H	1.000	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PEX5L	HGNC	ENSG00000114757				24	0	0	36	12	25
EPHB3	0	genome.wustl.edu	37	3	184298951	184298951	+	Silent	SNP	T	T	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	184298951	184298951	T	C	SNP	EPHB3	ENST00000330394	human	ensembl	74_37	+1	known	silent	c.2730	p.S910	0.988	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Kinase-like_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB3	HGNC	ENSG00000182580				105	0	0	134	32	19.2771
SCN11A	0	genome.wustl.edu	37	3	38912935	38912935	+	Splice_Site	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	38912935	38912935	C	T	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	splice_site	c.3759+1	e21+1	1.000	-	-	-	no_errors	SCN11A	HGNC	ENSG00000168356				22	0	0	16	5	23.8095
ZNF35	0	genome.wustl.edu	37	3	44694075	44694075	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	44694075	44694075	G	A	SNP	ZNF35	ENST00000396056	human	ensembl	74_37	+1	known	silent	c.219	p.A73	0.818	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF35	HGNC	ENSG00000169981				167	0	0	189	59	23.7903
TEX264	0	genome.wustl.edu	37	3	51733461	51733461	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	51733461	51733461	C	T	SNP	TEX264	ENST00000341333	human	ensembl	74_37	+1	known	nonsense	c.520	p.Q174*	1.000	NULL	superfamily_Reg_factor_effector_dom	-	no_errors	TEX264	HGNC	ENSG00000164081				99	0	0	156	50	24.2718
DNAH1	0	genome.wustl.edu	37	3	52395215	52395215	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	52395215	52395215	A	C	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	missense	c.4721	p.K1574T	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841				19	0	0	33	13	28.2609
GUCY1A3	0	genome.wustl.edu	37	4	156651353	156651353	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	4	156651353	156651353	T	A	SNP	GUCY1A3	ENST00000296518	human	ensembl	74_37	+1	known	missense	c.2043	p.N681K	0.976	NULL	pfam_A/G_cyclase,pfam_Haem_no_assoc-bd,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1A3	HGNC	ENSG00000164116				47	0	0	35	13	27.0833
SPP1	0	genome.wustl.edu	37	4	88902651	88902651	+	Missense_Mutation	SNP	A	A	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	4	88902651	88902651	A	C	SNP	SPP1	ENST00000395080	human	ensembl	74_37	+1	known	missense	c.241	p.S81R	0.998	pfam_Osteopontin,smart_Osteopontin,prints_Osteopontin	pfam_Osteopontin,smart_Osteopontin,prints_Osteopontin	-	no_errors	SPP1	HGNC	ENSG00000118785				104	0	0	77	37	32.4561
PCDHAC1	0	genome.wustl.edu	37	5	140308286	140308286	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	5	140308286	140308286	G	A	SNP	PCDHAC1	ENST00000253807	human	ensembl	74_37	+1	known	silent	c.1809	p.A603	0.996	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC1	HGNC	ENSG00000248383				72	0	0	63	29	31.5217
CAMK2A	0	genome.wustl.edu	37	5	149602668	149602668	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	5	149602668	149602668	G	A	SNP	CAMK2A	ENST00000398376	human	ensembl	74_37	-1	known	silent	c.1350	p.D450	0.702	pfam_Ca/CaM-dep_prot_kinase-assoc,superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2A	HGNC	ENSG00000070808				91	0	0	55	32	36.7816
HMGB3P22	0	genome.wustl.edu	37	5	179121536	179121536	+	RNA	SNP	C	C	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	5	179121536	179121536	C	A	SNP	HMGB3P22	ENST00000442010	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HMGB3P22	HGNC	ENSG00000225051				24	0	0	17	6	26.087
ADAMTS12	0	genome.wustl.edu	37	5	33643533	33643533	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	5	33643533	33643533	G	A	SNP	ADAMTS12	ENST00000504830	human	ensembl	74_37	-1	known	missense	c.1522	p.R508C	1.000	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS12	HGNC	ENSG00000151388				110	0	0	123	45	26.7857
LYSMD3	0	genome.wustl.edu	37	5	89814934	89814934	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	5	89814934	89814934	G	A	SNP	LYSMD3	ENST00000315948	human	ensembl	74_37	-1	known	missense	c.623	p.P208L	1.000	NULL	pfam_LysM_dom,smart_LysM_dom	-	no_errors	LYSMD3	HGNC	ENSG00000176018				78	0	0	57	5	8.06452
REV3L	0	genome.wustl.edu	37	6	111697854	111697854	+	Missense_Mutation	SNP	T	T	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	6	111697854	111697854	T	A	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	missense	c.1704	p.E568D	1.000	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413				61	0	0	44	10	18.5185
GRM1	0	genome.wustl.edu	37	6	146351241	146351241	+	Silent	SNP	T	T	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	6	146351241	146351241	T	G	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	silent	c.588	p.T196	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				81	0	0	112	27	19.4245
TSPO2	0	genome.wustl.edu	37	6	41010893	41010893	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	6	41010893	41010893	G	A	SNP	TSPO2	ENST00000373161	human	ensembl	74_37	+1	known	missense	c.169	p.V57M	0.332	pfam_TspO_MBR,pirsf_TspO_MBR	pfam_TspO_MBR,pirsf_TspO_MBR	-	no_errors	TSPO2	HGNC	ENSG00000112212				112	0	0	117	30	20.4082
ICK	0	genome.wustl.edu	37	6	52878511	52878511	+	Missense_Mutation	SNP	G	G	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	6	52878511	52878511	G	T	SNP	ICK	ENST00000350082	human	ensembl	74_37	-1	known	missense	c.1101	p.D367E	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ICK	HGNC	ENSG00000112144				132	1	0.75188	158	47	22.9268
KHDRBS2	0	genome.wustl.edu	37	6	62604706	62604706	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	6	62604706	62604706	G	A	SNP	KHDRBS2	ENST00000281156	human	ensembl	74_37	-1	known	missense	c.644	p.P215L	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS2	HGNC	ENSG00000112232				31	0	0	52	25	32.4675
SSPO	0	genome.wustl.edu	37	7	149489758	149489758	+	RNA	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	7	149489758	149489758	C	T	SNP	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				39	0	0	44	6	12
IQCE	0	genome.wustl.edu	37	7	2617908	2617908	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	7	2617908	2617908	G	A	SNP	IQCE	ENST00000402050	human	ensembl	74_37	+1	known	silent	c.498	p.L166	0.034	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCE	HGNC	ENSG00000106012				80	0	0	157	28	15.1351
ELMO1	0	genome.wustl.edu	37	7	37298854	37298854	+	Silent	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	7	37298854	37298854	C	T	SNP	ELMO1	ENST00000310758	human	ensembl	74_37	-1	known	silent	c.345	p.T115	0.052	pfam_DUF3361,superfamily_ARM-type_fold	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849				45	0	0	71	16	18.3908
GUSB	0	genome.wustl.edu	37	7	65445396	65445396	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	7	65445396	65445396	A	G	SNP	GUSB	ENST00000304895	human	ensembl	74_37	-1	known	missense	c.211	p.S71P	0.998	pfam_Glyco_hydro_2_N,superfamily_Galactose-bd-like	pfam_Glyco_hydro_2_TIM,pfam_Glyco_hydro_2_N,pfam_Glyco_hydro_2_Ig-like,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,superfamily_Glyco_hydro_2_Ig-like,prints_Glyco_hydro_2	-	no_errors	GUSB	HGNC	ENSG00000169919				15	0	0	34	2	5.55556
MSR1	0	genome.wustl.edu	37	8	16021613	16021613	+	Missense_Mutation	SNP	C	C	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	8	16021613	16021613	C	T	SNP	MSR1	ENST00000262101	human	ensembl	74_37	-1	known	missense	c.778	p.E260K	1.000	superfamily_STAT_TF_coiled-coil,prints_Macro_scav_rcpt	pfam_SRCR,pfam_Macro_scav_rcpt,pfam_Collagen,superfamily_Srcr_rcpt-rel,superfamily_STAT_TF_coiled-coil,smart_Srcr_rcpt-rel,prints_Macro_scav_rcpt,prints_SRCR,pfscan_SRCR	-	no_errors	MSR1	HGNC	ENSG00000038945				20	0	0	23	3	11.5385
ADAM18	0	genome.wustl.edu	37	8	39581392	39581392	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	8	39581392	39581392	A	G	SNP	ADAM18	ENST00000265707	human	ensembl	74_37	+1	known	missense	c.2143	p.K715E	0.031	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAM18	HGNC	ENSG00000168619				38	0	0	31	12	27.907
CHRNB3	0	genome.wustl.edu	37	8	42586889	42586889	+	Missense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	8	42586889	42586889	G	A	SNP	CHRNB3	ENST00000289957	human	ensembl	74_37	+1	known	missense	c.439	p.A147T	0.994	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB3	HGNC	ENSG00000147432				46	0	0	38	16	29.6296
PREX2	0	genome.wustl.edu	37	8	69011999	69011999	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	8	69011999	69011999	C	A	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.2636	p.T879N	0.466	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889				71	0	0	69	9	11.5385
BAAT	0	genome.wustl.edu	37	9	104124855	104124855	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	9	104124855	104124855	A	G	SNP	BAAT	ENST00000259407	human	ensembl	74_37	-1	known	missense	c.1112	p.L371P	0.949	pfam_BAAT_C,pirsf_Acyl-CoA_thioEstase_long-chain	pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain	-	no_errors	BAAT	HGNC	ENSG00000136881				44	0	0	89	23	20.5357
PAPPA	0	genome.wustl.edu	37	9	118989743	118989743	+	Missense_Mutation	SNP	A	A	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	9	118989743	118989743	A	T	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	missense	c.2145	p.E715D	0.997	superfamily_Fibronectin_type3	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752				95	0	0	120	27	18.3673
CDK5RAP2	0	genome.wustl.edu	37	9	123201972	123201972	+	Missense_Mutation	SNP	T	T	C			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	9	123201972	123201972	T	C	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.3427	p.I1143V	0.982	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861				64	0	0	50	29	36.7089
ZER1	0	genome.wustl.edu	37	9	131502299	131502299	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	9	131502299	131502299	G	A	SNP	ZER1	ENST00000291900	human	ensembl	74_37	-1	known	silent	c.1953	p.V651	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ZER1	HGNC	ENSG00000160445				67	0	0	124	17	12.0567
SMARCA2	0	genome.wustl.edu	37	9	2084121	2084121	+	Silent	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	9	2084121	2084121	G	A	SNP	SMARCA2	ENST00000349721	human	ensembl	74_37	+1	known	silent	c.2451	p.Q817	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,superfamily_RNaseH-like_dom,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	SMARCA2	HGNC	ENSG00000080503				31	0	0	12	21	63.6364
CDKN2A	0	genome.wustl.edu	37	9	21974695	21974695	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	9	21974695	21974695	G	T	SNP	CDKN2A	ENST00000446177	human	ensembl	74_37	-1	known	nonsense	c.132	p.Y44*	0.020	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2A	HGNC	ENSG00000147889				182	0	0	208	219	51.2881
NOL6	0	genome.wustl.edu	37	9	33469046	33469046	+	Missense_Mutation	SNP	C	C	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	9	33469046	33469046	C	A	SNP	NOL6	ENST00000297990	human	ensembl	74_37	-1	known	missense	c.936	p.Q312H	0.990	pfam_Nrap	pfam_Nrap	-	no_errors	NOL6	HGNC	ENSG00000165271				181	0	0	212	130	38.0117
TMEM2	0	genome.wustl.edu	37	9	74315723	74315723	+	Missense_Mutation	SNP	A	A	G			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	9	74315723	74315723	A	G	SNP	TMEM2	ENST00000377044	human	ensembl	74_37	-1	known	missense	c.3212	p.V1071A	1.000	NULL	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	TMEM2	HGNC	ENSG00000135048				28	0	0	22	10	31.25
SRPK3	0	genome.wustl.edu	37	X	153047060	153047060	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	X	153047060	153047060	G	A	SNP	SRPK3	ENST00000370101	human	ensembl	74_37	+1	known	nonsense	c.291	p.W97*	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	SRPK3	HGNC	ENSG00000184343				24	0	0	18	12	40
LOC100131825	0	genome.wustl.edu	37	1	159166613	159166613	+	RNA	DEL	T	T	-			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	159166613	159166613	T	-	DEL	LOC100131825	ENST00000415675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTA-134P22.2	Clone_based_vega_gene	ENSG00000225670				20	0	0	38	6	13.6364
LPHN2	0	genome.wustl.edu	37	1	82451082	82451082	+	RNA	DEL	T	T	-			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	1	82451082	82451082	T	-	DEL	LPHN2	ENST00000498776	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	LPHN2	HGNC	ENSG00000117114				18	0	0	5	2	28.5714
UBE2G2	0	genome.wustl.edu	37	21	46191155	46191156	+	RNA	INS	-	-	A			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	21	46191155	46191156	-	A	INS	UBE2G2	ENST00000477954	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	UBE2G2	HGNC	ENSG00000184787				23	0	0	19	5	20.8333
SIAH2	0	genome.wustl.edu	37	3	150480449	150480451	+	In_Frame_Del	DEL	CCG	CCG	-			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	CCG	CCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	3	150480449	150480451	CCG	-	DEL	SIAH2	ENST00000312960	human	ensembl	74_37	-1	known	in_frame_del	c.188_186	p.G63in_frame_del	1.000:1.000:0.993	NULL	pfam_7-in-absentia-prot_TRAF-dom,superfamily_TRAF-like,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	SIAH2	HGNC	ENSG00000181788				12	0	0	19	3	13.6364
TMPRSS11A	0	genome.wustl.edu	37	4	68810345	68810346	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	4	68810345	68810346	-	T	INS	TMPRSS11A	ENST00000334830	human	ensembl	74_37	-1	known	frame_shift_ins	c.144_143	p.E49fs	0.135:0.055	pfam_SEA_dom,pirsf_Pept_S1A_HAT/DESC1	pfam_Peptidase_S1,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_HAT/DESC1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS11A	HGNC	ENSG00000187054				30	0	0	15	8	34.7826
DDX3X	0	genome.wustl.edu	37	X	41205650	41205682	+	Frame_Shift_Del	DEL	TAGTGGCTACAGCAGTATGTATAAACATCTTTC	TAGTGGCTACAGCAGTATGTATAAACATCTTTC	-			TCGA-CD-A489-01A-11D-A24D-08	TCGA-CD-A489-10A-01D-A24F-08	TAGTGGCTACAGCAGTATGTATAAACATCTTTC	TAGTGGCTACAGCAGTATGTATAAACATCTTTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d0a6ef23-ca22-4c1a-8edc-992227c369da	436cc20a-4b6e-4d37-9b13-7136e43ef71b	X	41205650	41205682	TAGTGGCTACAGCAGTATGTATAAACATCTTTC	-	DEL	DDX3X	ENST00000399959	human	ensembl	74_37	+1	known	frame_shift_del	c.1484_1497	p.L495fs	0.994:0.944:1.000:1.000:0.986:1.000:1.000:1.000:1.000:1.000:0.996:1.000:1.000:1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX3X	HGNC	ENSG00000215301				23	0	0	16	16	50
