Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
WDR47	0	genome.wustl.edu	37	1	109514146	109514146	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	109514146	109514146	T	A	SNP	WDR47	ENST00000400794	human	ensembl	74_37	-1	known	missense	c.2690	p.D897V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_CTLH_C,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_CTLH_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR47	HGNC	ENSG00000085433				114	0	0	108	29	21.1679
LCE2A	0	genome.wustl.edu	37	1	152671534	152671534	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	152671534	152671534	G	A	SNP	LCE2A	ENST00000368779	human	ensembl	74_37	+1	known	missense	c.157	p.G53S	0.677	NULL	NULL	-	no_errors	LCE2A	HGNC	ENSG00000187173				179	0	0	204	51	20
TRIM46	0	genome.wustl.edu	37	1	155154567	155154567	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	155154567	155154567	G	A	SNP	TRIM46	ENST00000334634	human	ensembl	74_37	+1	known	missense	c.1828	p.G610R	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM46	HGNC	ENSG00000163462				33	0	0	52	8	13.3333
GON4L	0	genome.wustl.edu	37	1	155785747	155785747	+	RNA	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	155785747	155785747	T	C	SNP	GON4L	ENST00000471341	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	GON4L	HGNC	ENSG00000116580				18	0	0	16	7	30.4348
KCNT2	0	genome.wustl.edu	37	1	196300297	196300297	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	196300297	196300297	T	C	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.2092	p.R698G	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687				243	0	0	236	51	17.77
CRB1	0	genome.wustl.edu	37	1	197390846	197390846	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	197390846	197390846	T	G	SNP	CRB1	ENST00000367400	human	ensembl	74_37	+1	known	missense	c.1888	p.F630V	0.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_EG-like_dom,pfam_Laminin_G,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	CRB1	HGNC	ENSG00000134376				224	0	0	298	18	5.6962
OBSCN	0	genome.wustl.edu	37	1	228404777	228404777	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	228404777	228404777	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.2441	p.P814L	0.004	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				64	0	0	47	12	20.339
PLCH2	0	genome.wustl.edu	37	1	2415915	2415915	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	2415915	2415915	C	T	SNP	PLCH2	ENST00000378486	human	ensembl	74_37	+1	known	missense	c.674	p.T225M	0.991	smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH2	HGNC	ENSG00000149527				54	0	0	16	11	40.7407
C1orf101	0	genome.wustl.edu	37	1	244735822	244735822	+	Nonsense_Mutation	SNP	T	T	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	244735822	244735822	T	A	SNP	C1orf101	ENST00000366531	human	ensembl	74_37	+1	known	nonsense	c.1245	p.Y415*	0.995	NULL	NULL	-	no_errors	C1orf101	HGNC	ENSG00000179397				87	0	0	70	21	23.0769
GPATCH3	0	genome.wustl.edu	37	1	27223867	27223867	+	Silent	SNP	A	A	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	27223867	27223867	A	G	SNP	GPATCH3	ENST00000361720	human	ensembl	74_37	-1	known	silent	c.801	p.D267	0.000	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH3	HGNC	ENSG00000198746				314	0	0	284	23	7.49186
PTPRU	0	genome.wustl.edu	37	1	29644433	29644433	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	29644433	29644433	C	T	SNP	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	silent	c.3717	p.D1239	0.622	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656				62	0	0	41	7	14.5833
DIRAS3	0	genome.wustl.edu	37	1	68512741	68512741	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	68512741	68512741	G	T	SNP	DIRAS3	ENST00000370981	human	ensembl	74_37	-1	known	nonsense	c.240	p.C80*	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	DIRAS3	HGNC	ENSG00000162595				193	1	0.515464	151	56	27.0531
SORCS3	0	genome.wustl.edu	37	10	106959784	106959784	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	10	106959784	106959784	C	T	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	silent	c.2037	p.S679	0.916	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395				135	1	0.735294	189	11	5.5
PTCHD3	0	genome.wustl.edu	37	10	27687305	27687305	+	Nonsense_Mutation	SNP	G	G	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	10	27687305	27687305	G	C	SNP	PTCHD3	ENST00000438700	human	ensembl	74_37	-1	known	nonsense	c.2222	p.S741*	0.000	NULL	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077				62	0	0	83	5	5.68182
C10orf71	0	genome.wustl.edu	37	10	50531052	50531052	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	10	50531052	50531052	G	T	SNP	C10orf71	ENST00000374144	human	ensembl	74_37	+1	known	missense	c.462	p.E154D	0.217	NULL	NULL	-	no_errors	C10orf71	HGNC	ENSG00000177354				82	0	0	63	13	17.1053
ZSWIM8	0	genome.wustl.edu	37	10	75552483	75552483	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	10	75552483	75552483	A	G	SNP	ZSWIM8	ENST00000398706	human	ensembl	74_37	+1	known	missense	c.2186	p.Y729C	1.000	NULL	pfscan_Znf_SWIM	-	no_errors	ZSWIM8	HGNC	ENSG00000214655				83	0	0	91	30	24.7934
PLCE1	0	genome.wustl.edu	37	10	96025643	96025643	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	10	96025643	96025643	C	T	SNP	PLCE1	ENST00000260766	human	ensembl	74_37	+1	known	silent	c.4209	p.I1403	0.999	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_dom,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,smart_Ras-assoc,pfscan_C2_dom,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C	-	no_errors	PLCE1	HGNC	ENSG00000138193				143	0	0	172	18	9.47368
MUC5B	0	genome.wustl.edu	37	11	1261524	1261524	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	11	1261524	1261524	A	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.3898	p.R1300W	0.002	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				72	0	0	67	26	27.957
COPB1	0	genome.wustl.edu	37	11	14515257	14515257	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	11	14515257	14515257	C	T	SNP	COPB1	ENST00000249923	human	ensembl	74_37	-1	known	missense	c.422	p.R141H	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	pfam_Coatomer_bsu_C,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	-	no_errors	COPB1	HGNC	ENSG00000129083				124	0	0	183	10	5.18135
ATHL1	0	genome.wustl.edu	37	11	290921	290921	+	Silent	SNP	C	C	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	11	290921	290921	C	G	SNP	ATHL1	ENST00000409548	human	ensembl	74_37	+1	known	silent	c.714	p.L238	1.000	superfamily_6-hairpin_glycosidase-like	pfam_Glyco_hydro_65_M,superfamily_6-hairpin_glycosidase-like	-	no_errors	ATHL1	HGNC	ENSG00000142102				103	0	0	94	6	6
OR52K2	0	genome.wustl.edu	37	11	4471139	4471139	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	11	4471139	4471139	G	A	SNP	OR52K2	ENST00000325719	human	ensembl	74_37	+1	known	silent	c.570	p.A190	0.997	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52K2	HGNC	ENSG00000181963				148	0	0	184	39	17.4888
OR5T1	0	genome.wustl.edu	37	11	56043937	56043937	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	11	56043937	56043937	A	C	SNP	OR5T1	ENST00000313033	human	ensembl	74_37	+1	known	missense	c.823	p.S275R	0.006	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T1	HGNC	ENSG00000181698				296	1	0.3367	384	25	6.11247
SLC22A12	0	genome.wustl.edu	37	11	64359339	64359339	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	11	64359339	64359339	C	T	SNP	SLC22A12	ENST00000377574	human	ensembl	74_37	+1	known	missense	c.311	p.T104M	0.009	pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A12	HGNC	ENSG00000197891				53	0	0	49	19	27.9412
FAT3	0	genome.wustl.edu	37	11	92086909	92086909	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	11	92086909	92086909	G	A	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.1631	p.R544K	0.986	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				98	0	0	109	46	29.6774
MED17	0	genome.wustl.edu	37	11	93527121	93527121	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	11	93527121	93527121	C	T	SNP	MED17	ENST00000251871	human	ensembl	74_37	+1	known	missense	c.779	p.S260L	1.000	pfam_Mediator_Med17	pfam_Mediator_Med17	-	no_errors	MED17	HGNC	ENSG00000042429				164	0	0	188	32	14.5455
RASSF8	0	genome.wustl.edu	37	12	26217702	26217702	+	Silent	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	12	26217702	26217702	G	T	SNP	RASSF8	ENST00000282884	human	ensembl	74_37	+1	known	silent	c.375	p.P125	0.483	NULL	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	-	no_errors	RASSF8	HGNC	ENSG00000123094				155	0	0	179	15	7.73196
FAR2	0	genome.wustl.edu	37	12	29423406	29423406	+	Nonsense_Mutation	SNP	T	T	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	12	29423406	29423406	T	G	SNP	FAR2	ENST00000182377	human	ensembl	74_37	+1	known	nonsense	c.24	p.Y8*	0.691	NULL	pfam_Male_sterile_NAD-bd,pfam_FAR,pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase,pfam_Polysac_CapD-like	-	no_errors	FAR2	HGNC	ENSG00000064763				70	0	0	52	48	48
CNTN1	0	genome.wustl.edu	37	12	41327301	41327301	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	12	41327301	41327301	T	C	SNP	CNTN1	ENST00000347616	human	ensembl	74_37	+1	known	missense	c.742	p.F248L	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN1	HGNC	ENSG00000018236				121	0	0	137	11	7.43243
SLC38A1	0	genome.wustl.edu	37	12	46598091	46598091	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	12	46598091	46598091	T	G	SNP	SLC38A1	ENST00000398637	human	ensembl	74_37	-1	known	missense	c.815	p.N272T	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A1	HGNC	ENSG00000111371				263	0	0	270	31	10.299
ESPL1	0	genome.wustl.edu	37	12	53663425	53663425	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	12	53663425	53663425	G	A	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	silent	c.699	p.V233	0.041	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476				436	0	0	341	61	15.1741
BAZ2A	0	genome.wustl.edu	37	12	57005592	57005592	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	12	57005592	57005592	T	C	SNP	BAZ2A	ENST00000551812	human	ensembl	74_37	-1	known	missense	c.1580	p.E527G	0.954	superfamily_DNA-bd_dom	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,smart_Methyl_CpG_DNA-bd,smart_AT_hook_DNA-bd_motif,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2A	HGNC	ENSG00000076108				16	0	0	20	3	13.0435
PLXNC1	0	genome.wustl.edu	37	12	94645229	94645229	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	12	94645229	94645229	G	A	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	missense	c.2806	p.V936I	0.675	superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040				87	0	0	60	4	6.25
CCDC38	0	genome.wustl.edu	37	12	96330276	96330276	+	Silent	SNP	A	A	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	12	96330276	96330276	A	G	SNP	CCDC38	ENST00000344280	human	ensembl	74_37	-1	known	silent	c.12	p.N4	0.000	NULL	NULL	-	no_errors	CCDC38	HGNC	ENSG00000165972				29	0	0	19	11	36.6667
SPRYD7	0	genome.wustl.edu	37	13	50502102	50502102	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	13	50502102	50502102	T	C	SNP	SPRYD7	ENST00000361840	human	ensembl	74_37	-1	known	missense	c.343	p.K115E	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	-	no_errors	SPRYD7	HGNC	ENSG00000123178				144	0	0	176	10	5.37634
TXNDC16	0	genome.wustl.edu	37	14	52981665	52981665	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	14	52981665	52981665	C	T	SNP	TXNDC16	ENST00000281741	human	ensembl	74_37	-1	known	missense	c.538	p.A180T	1.000	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC16	HGNC	ENSG00000087301				201	0	0	137	97	41.453
AKAP5	0	genome.wustl.edu	37	14	64935787	64935787	+	Silent	SNP	G	G	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	14	64935787	64935787	G	C	SNP	AKAP5	ENST00000320636	human	ensembl	74_37	+1	known	silent	c.675	p.T225	0.018	NULL	pfam_Pkinase-A_anch_WSK-motif	-	no_errors	AKAP5	HGNC	ENSG00000179841				201	0	0	167	39	18.932
DNM1P47	0	genome.wustl.edu	37	15	102294133	102294133	+	RNA	SNP	C	C	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	15	102294133	102294133	C	G	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660				9	0	0	5	7	58.3333
MEIS2	0	genome.wustl.edu	37	15	37184392	37184392	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	15	37184392	37184392	C	T	SNP	MEIS2	ENST00000561208	human	ensembl	74_37	-1	known	missense	c.1416	p.M472I	1.000	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	MEIS2	HGNC	ENSG00000134138				433	1	0.230415	444	32	6.72269
DLL4	0	genome.wustl.edu	37	15	41228590	41228590	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	15	41228590	41228590	G	T	SNP	DLL4	ENST00000249749	human	ensembl	74_37	+1	known	missense	c.1405	p.G469C	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,superfamily_Growth_fac_rcpt_N_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	DLL4	HGNC	ENSG00000128917				25	0	0	26	3	10.3448
ISL2	0	genome.wustl.edu	37	15	76632641	76632641	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	15	76632641	76632641	C	T	SNP	ISL2	ENST00000290759	human	ensembl	74_37	+1	known	missense	c.536	p.A179V	0.989	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	ISL2	HGNC	ENSG00000159556				34	0	0	17	10	37.037
RMI2	0	genome.wustl.edu	37	16	11444592	11444592	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	16	11444592	11444592	T	C	SNP	RMI2	ENST00000312499	human	ensembl	74_37	+1	known	missense	c.389	p.I130T	0.736	NULL	NULL	-	no_errors	RMI2	HGNC	ENSG00000175643				189	0	0	201	19	8.63636
TPSG1	0	genome.wustl.edu	37	16	1272676	1272676	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	16	1272676	1272676	C	T	SNP	TPSG1	ENST00000234798	human	ensembl	74_37	-1	known	missense	c.487	p.G163S	0.939	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TPSG1	HGNC	ENSG00000116176				333	0	0	267	52	16.3009
TPSD1	0	genome.wustl.edu	37	16	1307050	1307050	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	16	1307050	1307050	C	T	SNP	TPSD1	ENST00000211076	human	ensembl	74_37	+1	known	silent	c.507	p.D169	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	TPSD1	HGNC	ENSG00000095917				22	0	0	16	6	27.2727
ATXN2L	0	genome.wustl.edu	37	16	28837136	28837136	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	16	28837136	28837136	G	A	SNP	ATXN2L	ENST00000395547	human	ensembl	74_37	+1	known	missense	c.439	p.G147S	1.000	superfamily_LSM_dom	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2L	HGNC	ENSG00000168488				117	0	0	112	45	28.6624
ADCY7	0	genome.wustl.edu	37	16	50345962	50345962	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	16	50345962	50345962	C	T	SNP	ADCY7	ENST00000254235	human	ensembl	74_37	+1	known	missense	c.2464	p.R822C	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY7	HGNC	ENSG00000121281				136	0	0	100	36	26.4706
LINC00922	0	genome.wustl.edu	37	16	65319250	65319250	+	RNA	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	16	65319250	65319250	G	A	SNP	LINC00922	ENST00000564041	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00922	HGNC	ENSG00000261742				44	0	0	51	9	15
USP7	0	genome.wustl.edu	37	16	9017167	9017167	+	Silent	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	16	9017167	9017167	T	C	SNP	USP7	ENST00000344836	human	ensembl	74_37	-1	known	silent	c.288	p.P96	0.251	pfam_MATH,superfamily_TRAF-like,smart_MATH,pfscan_MATH	pfam_Peptidase_C19/C67,pfam_MATH,pfam_USP7_ICP0-binding_dom,superfamily_TRAF-like,smart_MATH,pfscan_MATH,pfscan_Peptidase_C19/C67	-	no_errors	USP7	HGNC	ENSG00000187555				187	0	0	100	106	51.4563
FAM83G	0	genome.wustl.edu	37	17	18907189	18907189	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	18907189	18907189	G	A	SNP	FAM83G	ENST00000345041	human	ensembl	74_37	-1	known	nonsense	c.166	p.R56*	1.000	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83G	HGNC	ENSG00000188522				70	0	0	50	29	36.7089
KRTAP4-3	0	genome.wustl.edu	37	17	39324138	39324138	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	39324138	39324138	C	A	SNP	KRTAP4-3	ENST00000391356	human	ensembl	74_37	-1	known	missense	c.287	p.R96M	0.000	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-3	HGNC	ENSG00000196156				27	0	0	263	46	14.8867
KRTAP4-1	0	genome.wustl.edu	37	17	39340975	39340975	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	39340975	39340975	G	T	SNP	KRTAP4-1	ENST00000398472	human	ensembl	74_37	-1	known	nonsense	c.132	p.C44*	0.978	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-1	HGNC	ENSG00000198443				50	0	0	586	48	7.57098
KRTAP4-1	0	genome.wustl.edu	37	17	39340982	39340982	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	39340982	39340982	G	T	SNP	KRTAP4-1	ENST00000398472	human	ensembl	74_37	-1	known	missense	c.125	p.S42Y	0.939	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-1	HGNC	ENSG00000198443				53	0	0	583	49	7.75316
KRT13	0	genome.wustl.edu	37	17	39659306	39659306	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	39659306	39659306	C	T	SNP	KRT13	ENST00000246635	human	ensembl	74_37	-1	known	silent	c.780	p.V260	1.000	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT13	HGNC	ENSG00000171401				613	0	0	4894	331	6.33493
TBC1D3P1-DHX40P1	0	genome.wustl.edu	37	17	58089005	58089005	+	RNA	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	58089005	58089005	C	T	SNP	TBC1D3P1-DHX40P1	ENST00000407042	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	TBC1D3P1-DHX40P1	HGNC	ENSG00000267104				279	0	0	187	33	15
RPL12P38	0	genome.wustl.edu	37	17	58512644	58512644	+	RNA	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	58512644	58512644	T	C	SNP	RPL12P38	ENST00000588627	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL12P38	HGNC	ENSG00000213228				46	0	0	47	4	7.84314
TP53	0	genome.wustl.edu	37	17	7577534	7577534	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	7577534	7577534	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.747	p.R249S	0.977	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				91	0	0	40	37	48.0519
WDR16	0	genome.wustl.edu	37	17	9503482	9503482	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	9503482	9503482	G	A	SNP	WDR16	ENST00000299764	human	ensembl	74_37	+1	known	silent	c.765	p.A255	0.277	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR16	HGNC	ENSG00000166596				253	0	0	178	79	30.7393
C18orf8	0	genome.wustl.edu	37	18	21098916	21098916	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	18	21098916	21098916	C	T	SNP	C18orf8	ENST00000269221	human	ensembl	74_37	+1	known	missense	c.716	p.A239V	1.000	NULL	pfam_Mic1,superfamily_WD40_repeat_dom	-	no_errors	C18orf8	HGNC	ENSG00000141452				129	0	0	131	19	12.6667
KEAP1	0	genome.wustl.edu	37	19	10610425	10610425	+	Silent	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	19	10610425	10610425	G	T	SNP	KEAP1	ENST00000171111	human	ensembl	74_37	-1	known	silent	c.285	p.A95	0.972	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KEAP1	HGNC	ENSG00000079999				65	0	0	59	18	23.3766
ELL	0	genome.wustl.edu	37	19	18555639	18555639	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	19	18555639	18555639	A	G	SNP	ELL	ENST00000262809	human	ensembl	74_37	-1	known	missense	c.1789	p.Y597H	1.000	pfam_Occludin_RNApol2_elong_fac_ELL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL	HGNC	ENSG00000105656				129	0	0	117	28	19.3103
LGALS16	0	genome.wustl.edu	37	19	40151153	40151153	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	19	40151153	40151153	G	A	SNP	LGALS16	ENST00000392051	human	ensembl	74_37	+1	known	missense	c.422	p.R141Q	0.002	superfamily_ConA-like_lec_gl_sf	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS16	HGNC	ENSG00000249861				9	0	0	5	3	37.5
CHAF1A	0	genome.wustl.edu	37	19	4433127	4433127	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	19	4433127	4433127	G	A	SNP	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	missense	c.2264	p.R755Q	0.901	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670				73	0	0	43	5	10.4167
ZNF611	0	genome.wustl.edu	37	19	53209605	53209605	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	19	53209605	53209605	T	C	SNP	ZNF611	ENST00000319783	human	ensembl	74_37	-1	known	missense	c.703	p.K235E	0.001	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF611	HGNC	ENSG00000213020				233	0	0	243	17	6.53846
ZNF611	0	genome.wustl.edu	37	19	53209635	53209635	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	19	53209635	53209635	G	A	SNP	ZNF611	ENST00000319783	human	ensembl	74_37	-1	known	missense	c.673	p.H225Y	0.451	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF611	HGNC	ENSG00000213020				222	0	0	243	15	5.81395
ZNF761	0	genome.wustl.edu	37	19	53958797	53958797	+	RNA	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	19	53958797	53958797	C	T	SNP	ZNF761	ENST00000334095	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	ZNF761	HGNC	ENSG00000160336				269	0	0	292	17	5.50162
LILRB1	0	genome.wustl.edu	37	19	55148076	55148076	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	19	55148076	55148076	G	A	SNP	LILRB1	ENST00000324602	human	ensembl	74_37	+1	known	silent	c.1785	p.A595	0.000	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB1	HGNC	ENSG00000104972				38	0	0	22	12	35.2941
POLRMT	0	genome.wustl.edu	37	19	621655	621655	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	19	621655	621655	C	T	SNP	POLRMT	ENST00000588649	human	ensembl	74_37	-1	known	silent	c.2043	p.Q681	0.722	NULL	pfam_DNA-dir_Rpol_phage-type	-	no_errors	POLRMT	HGNC	ENSG00000099821				17	0	0	15	4	21.0526
PTPN18	0	genome.wustl.edu	37	2	131128152	131128152	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	131128152	131128152	G	A	SNP	PTPN18	ENST00000175756	human	ensembl	74_37	+1	known	missense	c.712	p.V238I	0.996	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN18	HGNC	ENSG00000072135				132	0	0	141	11	7.23684
PLEKHB2	0	genome.wustl.edu	37	2	131904309	131904309	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	131904309	131904309	C	T	SNP	PLEKHB2	ENST00000403716	human	ensembl	74_37	+1	known	missense	c.632	p.T211M	0.995	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHB2	HGNC	ENSG00000115762				391	0	0	316	83	20.802
NR4A2	0	genome.wustl.edu	37	2	157185018	157185018	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	157185018	157185018	C	T	SNP	NR4A2	ENST00000539077	human	ensembl	74_37	-1	known	missense	c.925	p.V309M	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NURR_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A2	HGNC	ENSG00000153234				117	0	0	110	9	7.56303
FN1	0	genome.wustl.edu	37	2	216232683	216232683	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	216232683	216232683	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	silent	c.6921	p.A2307	0.957	pfam_Fibronectin_type1,smart_Fibronectin_type1,pfscan_Fibronectin_type1	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				98	0	0	104	7	6.30631
ATG9A	0	genome.wustl.edu	37	2	220091655	220091655	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	220091655	220091655	C	T	SNP	ATG9A	ENST00000361242	human	ensembl	74_37	-1	known	missense	c.148	p.V50I	1.000	NULL	pfam_Autophagy-rel_prot_9,superfamily_Cyt_c_oxidase_su3	-	no_errors	ATG9A	HGNC	ENSG00000198925				104	0	0	73	15	17.0455
NYAP2	0	genome.wustl.edu	37	2	226447571	226447571	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	226447571	226447571	G	A	SNP	NYAP2	ENST00000272907	human	ensembl	74_37	+1	known	missense	c.1438	p.V480M	0.096	NULL	NULL	-	no_errors	NYAP2	HGNC	ENSG00000144460				68	0	0	57	11	16.1765
NCOA1	0	genome.wustl.edu	37	2	24964989	24964989	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	24964989	24964989	G	C	SNP	NCOA1	ENST00000348332	human	ensembl	74_37	+1	known	missense	c.3640	p.G1214R	1.000	pfam_DUF1518,pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA1	HGNC	ENSG00000084676				85	0	0	121	9	6.92308
RAB10	0	genome.wustl.edu	37	2	26350778	26350778	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	26350778	26350778	C	T	SNP	RAB10	ENST00000264710	human	ensembl	74_37	+1	known	silent	c.477	p.I159	0.997	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB10	HGNC	ENSG00000084733				163	0	0	232	40	14.7059
OTOF	0	genome.wustl.edu	37	2	26695389	26695389	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	26695389	26695389	C	T	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	missense	c.3862	p.A1288T	0.977	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155				124	0	0	80	39	32.7731
ALMS1	0	genome.wustl.edu	37	2	73680445	73680445	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	73680445	73680445	C	T	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	missense	c.6788	p.T2263I	0.130	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127				91	0	0	151	9	5.625
SNPH	0	genome.wustl.edu	37	20	1281207	1281207	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	20	1281207	1281207	C	T	SNP	SNPH	ENST00000381867	human	ensembl	74_37	+1	known	missense	c.292	p.R98C	1.000	NULL	NULL	-	no_errors	SNPH	HGNC	ENSG00000101298				66	0	0	71	13	15.4762
SNORD110	0	genome.wustl.edu	37	20	2634917	2634917	+	RNA	SNP	C	C	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	20	2634917	2634917	C	A	SNP	SNORD110	ENST00000408189	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.125	-	-	-	no_errors	SNORD110	HGNC	ENSG00000221116				165	0	0	195	76	28.0443
CHD6	0	genome.wustl.edu	37	20	40045389	40045389	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	20	40045389	40045389	A	C	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.6325	p.L2109V	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177				36	0	0	71	19	21.1111
KCNQ2	0	genome.wustl.edu	37	20	62038567	62038567	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	20	62038567	62038567	G	A	SNP	KCNQ2	ENST00000354587	human	ensembl	74_37	-1	known	silent	c.2073	p.H691	0.007	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ2	HGNC	ENSG00000075043				44	0	0	38	11	22.449
BAGE2	0	genome.wustl.edu	37	21	11098863	11098863	+	RNA	SNP	A	A	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	21	11098863	11098863	A	G	SNP	BAGE2	ENST00000470054	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.043	-	-	-	no_errors	BAGE2	HGNC	ENSG00000187172				43	0	0	44	5	10.2041
RBM11	0	genome.wustl.edu	37	21	15599341	15599341	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	21	15599341	15599341	C	A	SNP	RBM11	ENST00000400577	human	ensembl	74_37	+1	known	missense	c.573	p.H191Q	0.604	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM11	HGNC	ENSG00000185272				501	1	0.199203	404	117	22.4568
PRDM15	0	genome.wustl.edu	37	21	43277345	43277345	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	21	43277345	43277345	G	A	SNP	PRDM15	ENST00000269844	human	ensembl	74_37	-1	known	silent	c.1323	p.F441	0.952	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM15	HGNC	ENSG00000141956				169	0	0	132	8	5.71429
ATP6V1E1	0	genome.wustl.edu	37	22	18082836	18082836	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	22	18082836	18082836	C	T	SNP	ATP6V1E1	ENST00000253413	human	ensembl	74_37	-1	known	missense	c.392	p.R131Q	0.986	pfam_ATPase_V1/A1-cplx_esu	pfam_ATPase_V1/A1-cplx_esu	-	no_errors	ATP6V1E1	HGNC	ENSG00000131100				107	0	0	94	5	5.05051
RPL3	0	genome.wustl.edu	37	22	39714449	39714449	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	22	39714449	39714449	G	A	SNP	RPL3	ENST00000216146	human	ensembl	74_37	-1	known	missense	c.152	p.A51V	1.000	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	-	no_errors	RPL3	HGNC	ENSG00000100316				76	0	0	53	41	43.617
SBF1	0	genome.wustl.edu	37	22	50904409	50904409	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	22	50904409	50904409	G	A	SNP	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	missense	c.992	p.T331M	0.970	NULL	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241				172	0	0	83	63	43.1507
B4GALT4	0	genome.wustl.edu	37	3	118948741	118948741	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	118948741	118948741	G	A	SNP	B4GALT4	ENST00000359213	human	ensembl	74_37	-1	known	missense	c.206	p.T69M	0.000	NULL	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT4	HGNC	ENSG00000121578				90	0	0	88	48	35.2941
ARGFX	0	genome.wustl.edu	37	3	121305435	121305435	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	121305435	121305435	G	T	SNP	ARGFX	ENST00000334384	human	ensembl	74_37	+1	known	missense	c.936	p.L312F	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	ARGFX	HGNC	ENSG00000186103				87	0	0	87	5	5.43478
ALDH1L1	0	genome.wustl.edu	37	3	125854391	125854391	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	125854391	125854391	G	A	SNP	ALDH1L1	ENST00000393434	human	ensembl	74_37	-1	known	missense	c.1459	p.R487W	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L1	HGNC	ENSG00000144908				37	0	0	44	10	18.5185
CP	0	genome.wustl.edu	37	3	148927978	148927978	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	148927978	148927978	C	T	SNP	CP	ENST00000264613	human	ensembl	74_37	-1	known	missense	c.583	p.G195R	1.000	pfam_Cu-oxidase_3,superfamily_Cupredoxin	pfam_Cu-oxidase_2,pfam_Cu-oxidase_3,pfam_Cu-oxidase,superfamily_Cupredoxin	-	no_errors	CP	HGNC	ENSG00000047457				164	1	0.606061	246	18	6.81818
SERPINI2	0	genome.wustl.edu	37	3	167183334	167183334	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	167183334	167183334	A	C	SNP	SERPINI2	ENST00000264677	human	ensembl	74_37	-1	known	missense	c.606	p.N202K	0.746	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINI2	HGNC	ENSG00000114204				86	0	0	81	29	26.3636
TNFSF10	0	genome.wustl.edu	37	3	172241149	172241149	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	172241149	172241149	C	T	SNP	TNFSF10	ENST00000241261	human	ensembl	74_37	-1	known	missense	c.26	p.G9E	0.004	pirsf_TNF_ligand_10/11	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pirsf_TNF_ligand_10/11,pfscan_TNF_dom	-	no_errors	TNFSF10	HGNC	ENSG00000121858				114	0	0	142	12	7.79221
MUC4	0	genome.wustl.edu	37	3	195505836	195505836	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	195505836	195505836	G	C	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.12615	p.H4205Q	0.981	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				8	0	0	11	5	31.25
SCN11A	0	genome.wustl.edu	37	3	38888949	38888949	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	38888949	38888949	C	A	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	missense	c.4612	p.A1538S	0.177	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356				58	0	0	45	20	30.7692
ERC2	0	genome.wustl.edu	37	3	56114990	56114990	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	56114990	56114990	A	C	SNP	ERC2	ENST00000288221	human	ensembl	74_37	-1	known	missense	c.1496	p.L499R	1.000	pfam_CAZ_cplx_RIM-bd_prot,superfamily_Prefoldin	pfam_CAZ_cplx_RIM-bd_prot,superfamily_Prefoldin	-	no_errors	ERC2	HGNC	ENSG00000187672				44	0	0	41	3	6.81818
BANK1	0	genome.wustl.edu	37	4	102783799	102783799	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	4	102783799	102783799	A	C	SNP	BANK1	ENST00000322953	human	ensembl	74_37	+1	known	missense	c.741	p.K247N	0.897	NULL	superfamily_Ankyrin_rpt-contain_dom	-	no_errors	BANK1	HGNC	ENSG00000153064				53	0	0	59	8	11.9403
WDR17	0	genome.wustl.edu	37	4	177084327	177084327	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	4	177084327	177084327	G	A	SNP	WDR17	ENST00000280190	human	ensembl	74_37	+1	known	missense	c.2945	p.R982H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR17	HGNC	ENSG00000150627				121	0	0	81	64	44.1379
CHRNA9	0	genome.wustl.edu	37	4	40356537	40356537	+	Nonstop_Mutation	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	4	40356537	40356537	G	T	SNP	CHRNA9	ENST00000310169	human	ensembl	74_37	+1	known	nonstop	c.1440	p.*480Y	0.167	NULL	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA9	HGNC	ENSG00000174343				264	0	0	140	86	38.0531
SLCO4C1	0	genome.wustl.edu	37	5	101583042	101583042	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	101583042	101583042	C	T	SNP	SLCO4C1	ENST00000310954	human	ensembl	74_37	-1	known	silent	c.1725	p.A575	0.000	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO4C1	HGNC	ENSG00000173930				169	0	0	159	48	23.1884
TSLP	0	genome.wustl.edu	37	5	110409342	110409342	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	110409342	110409342	A	G	SNP	TSLP	ENST00000344895	human	ensembl	74_37	+1	known	missense	c.350	p.Q117R	0.768	NULL	NULL	-	no_errors	TSLP	HGNC	ENSG00000145777				173	0	0	161	13	7.47126
NME5	0	genome.wustl.edu	37	5	137454573	137454573	+	Silent	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	137454573	137454573	T	C	SNP	NME5	ENST00000265191	human	ensembl	74_37	-1	known	silent	c.489	p.L163	0.901	pfam_Dpy-30_motif,pirsf_NDK_H5	pfam_Nucleoside_diP_kinase,pfam_Dpy-30_motif,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,pirsf_NDK_H5,prints_Nucleoside_diP_kinase	-	no_errors	NME5	HGNC	ENSG00000112981				65	0	0	72	9	11.1111
FAM53C	0	genome.wustl.edu	37	5	137680803	137680803	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	137680803	137680803	G	C	SNP	FAM53C	ENST00000239906	human	ensembl	74_37	+1	known	missense	c.426	p.W142C	1.000	NULL	NULL	-	no_errors	FAM53C	HGNC	ENSG00000120709				198	1	0.502513	188	19	9.17874
HSPA9	0	genome.wustl.edu	37	5	137902355	137902355	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	137902355	137902355	G	C	SNP	HSPA9	ENST00000297185	human	ensembl	74_37	-1	known	missense	c.932	p.A311G	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl,tigrfam_Chaperone_DnaK	pfam_Hsp_70_fam,pfam_MreB_Mrl,pfam_Carb_kinase_FGGY_C,prints_Hsp_70_fam,tigrfam_Chaperone_DnaK	-	no_errors	HSPA9	HGNC	ENSG00000113013				199	0	0	230	15	6.12245
PCDHB12	0	genome.wustl.edu	37	5	140590450	140590450	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	140590450	140590450	G	A	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	silent	c.1971	p.T657	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328				94	0	0	94	7	6.93069
PCDHB13	0	genome.wustl.edu	37	5	140595078	140595078	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	140595078	140595078	C	T	SNP	PCDHB13	ENST00000341948	human	ensembl	74_37	+1	known	silent	c.1383	p.R461	0.007	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC	ENSG00000187372				213	0	0	147	68	31.6279
TIMD4	0	genome.wustl.edu	37	5	156381444	156381444	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	156381444	156381444	G	A	SNP	TIMD4	ENST00000274532	human	ensembl	74_37	-1	known	missense	c.382	p.R128C	0.001	smart_Ig_sub	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	TIMD4	HGNC	ENSG00000145850				61	0	0	48	16	25
GABRG2	0	genome.wustl.edu	37	5	161530999	161530999	+	Silent	SNP	A	A	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	161530999	161530999	A	C	SNP	GABRG2	ENST00000356592	human	ensembl	74_37	+1	known	silent	c.736	p.R246	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg2_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG2	HGNC	ENSG00000113327				87	0	0	87	9	9.375
NSUN2	0	genome.wustl.edu	37	5	6616908	6616908	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	6616908	6616908	T	C	SNP	NSUN2	ENST00000264670	human	ensembl	74_37	-1	known	missense	c.953	p.Y318C	0.999	pfam_Fmu/NOL1/Nop2p,prints_RCMT	pfam_Fmu/NOL1/Nop2p,prints_RCMT,prints_RCMT_NCL1	-	no_errors	NSUN2	HGNC	ENSG00000037474				113	0	0	117	10	7.87402
COL4A3BP	0	genome.wustl.edu	37	5	74721289	74721289	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	5	74721289	74721289	C	A	SNP	COL4A3BP	ENST00000380494	human	ensembl	74_37	-1	known	missense	c.876	p.M292I	1.000	NULL	pfam_START_lipid-bd_dom,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_START_lipid-bd_dom,pfscan_Pleckstrin_homology,pfscan_START_lipid-bd_dom	-	no_errors	COL4A3BP	HGNC	ENSG00000113163				146	1	0.680272	171	12	6.55738
REPS1	0	genome.wustl.edu	37	6	139251228	139251228	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	6	139251228	139251228	C	T	SNP	REPS1	ENST00000450536	human	ensembl	74_37	-1	known	silent	c.1143	p.G381	0.523	NULL	smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	REPS1	HGNC	ENSG00000135597				88	0	0	85	18	17.4757
HIVEP2	0	genome.wustl.edu	37	6	143093784	143093784	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	6	143093784	143093784	G	A	SNP	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	missense	c.2092	p.R698W	1.000	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818				194	0	0	262	21	7.42049
ABT1	0	genome.wustl.edu	37	6	26598746	26598746	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	6	26598746	26598746	G	A	SNP	ABT1	ENST00000274849	human	ensembl	74_37	+1	known	missense	c.692	p.R231H	0.254	NULL	NULL	-	no_errors	ABT1	HGNC	ENSG00000146109				75	0	0	75	7	8.53659
HIST1H1B	0	genome.wustl.edu	37	6	27834674	27834674	+	Nonsense_Mutation	SNP	T	T	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	6	27834674	27834674	T	A	SNP	HIST1H1B	ENST00000331442	human	ensembl	74_37	-1	known	nonsense	c.634	p.K212*	0.998	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1B	HGNC	ENSG00000184357				69	0	0	67	10	12.987
C6orf201	0	genome.wustl.edu	37	6	4099426	4099426	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	6	4099426	4099426	T	A	SNP	C6orf201	ENST00000333388	human	ensembl	74_37	+1	known	missense	c.287	p.V96D	0.984	NULL	NULL	-	no_errors	C6orf201	HGNC	ENSG00000185689				84	0	0	93	13	12.2642
RELN	0	genome.wustl.edu	37	7	103155636	103155636	+	Silent	SNP	A	A	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	7	103155636	103155636	A	C	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	silent	c.8115	p.T2705	0.042	superfamily_Sialidases	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				64	0	0	56	26	31.7073
THSD7A	0	genome.wustl.edu	37	7	11514005	11514005	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	7	11514005	11514005	T	G	SNP	THSD7A	ENST00000423059	human	ensembl	74_37	-1	known	missense	c.2208	p.K736N	1.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108				74	0	0	98	32	24.6154
LRGUK	0	genome.wustl.edu	37	7	133884049	133884049	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	7	133884049	133884049	G	T	SNP	LRGUK	ENST00000285928	human	ensembl	74_37	+1	known	missense	c.1623	p.E541D	0.953	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	-	no_errors	LRGUK	HGNC	ENSG00000155530				289	0	0	311	27	7.98817
FAM131B	0	genome.wustl.edu	37	7	143053722	143053722	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	7	143053722	143053722	G	A	SNP	FAM131B	ENST00000443739	human	ensembl	74_37	-1	known	missense	c.1004	p.A335V	0.896	NULL	NULL	-	no_errors	FAM131B	HGNC	ENSG00000159784				348	0	0	400	27	6.32319
KRBA1	0	genome.wustl.edu	37	7	149420837	149420837	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	7	149420837	149420837	C	T	SNP	KRBA1	ENST00000255992	human	ensembl	74_37	+1	known	missense	c.785	p.A262V	0.007	NULL	NULL	-	no_errors	KRBA1	HGNC	ENSG00000133619				70	0	0	58	23	28.3951
DPP6	0	genome.wustl.edu	37	7	154667658	154667658	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	7	154667658	154667658	G	A	SNP	DPP6	ENST00000377770	human	ensembl	74_37	+1	known	silent	c.1926	p.E642	1.000	pfam_Peptidase_S9	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_PD40	-	no_errors	DPP6	HGNC	ENSG00000130226				30	0	0	25	8	24.2424
ZNF733P	0	genome.wustl.edu	37	7	62751991	62751991	+	RNA	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	7	62751991	62751991	G	A	SNP	ZNF733P	ENST00000331425	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.802	-	-	-	no_errors	ZNF733P	HGNC	ENSG00000185037				101	0	0	94	27	22.314
SEMA3D	0	genome.wustl.edu	37	7	84628757	84628757	+	Nonstop_Mutation	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	7	84628757	84628757	T	C	SNP	SEMA3D	ENST00000284136	human	ensembl	74_37	-1	known	nonstop	c.2333	p.*778W	1.000	NULL	pfam_Semap_dom,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3D	HGNC	ENSG00000153993				79	0	0	132	8	5.71429
GNGT1	0	genome.wustl.edu	37	7	93540228	93540228	+	Nonstop_Mutation	SNP	T	T	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	7	93540228	93540228	T	C	SNP	GNGT1	ENST00000248572	human	ensembl	74_37	+1	known	nonstop	c.223	p.*75Q	0.992	NULL	pfam_G-protein_gamma-like_dom,superfamily_G-protein_gamma-like_dom,smart_G-protein_gamma-like_dom,pfscan_G-protein_gamma-like_dom,prints_Gprotein-gamma	-	no_errors	GNGT1	HGNC	ENSG00000127928				58	0	0	65	17	20.7317
TRPS1	0	genome.wustl.edu	37	8	116616721	116616721	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	8	116616721	116616721	G	A	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.1475	p.S492F	0.998	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447				116	0	0	149	8	5.09554
EXT1	0	genome.wustl.edu	37	8	118847770	118847770	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	8	118847770	118847770	C	T	SNP	EXT1	ENST00000378204	human	ensembl	74_37	-1	known	missense	c.1077	p.M359I	1.000	pfam_Exostosin	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXT1	HGNC	ENSG00000182197				81	0	0	94	20	17.5439
LYPD2	0	genome.wustl.edu	37	8	143832577	143832577	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	8	143832577	143832577	G	A	SNP	LYPD2	ENST00000359228	human	ensembl	74_37	-1	known	missense	c.70	p.R24C	0.000	smart_LY6_UPA_recep-like	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LYPD2	HGNC	ENSG00000197353				153	0	0	167	30	15.2284
CPSF1	0	genome.wustl.edu	37	8	145623313	145623313	+	Silent	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	8	145623313	145623313	G	A	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	silent	c.1929	p.G643	0.997	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894				68	0	0	39	5	11.3636
PI15	0	genome.wustl.edu	37	8	75756215	75756215	+	Splice_Site	SNP	G	G	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	8	75756215	75756215	G	T	SNP	PI15	ENST00000260113	human	ensembl	74_37	+1	known	splice_site	c.274-1	e2-1	1.000	-	-	-	no_errors	PI15	HGNC	ENSG00000137558				217	0	0	277	28	9.18033
TMEM64	0	genome.wustl.edu	37	8	91657358	91657358	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	8	91657358	91657358	A	G	SNP	TMEM64	ENST00000458549	human	ensembl	74_37	-1	known	missense	c.776	p.L259P	1.000	pfam_SNARE_assoc	pfam_SNARE_assoc	-	no_errors	TMEM64	HGNC	ENSG00000180694				95	0	0	102	12	10.5263
ZNF462	0	genome.wustl.edu	37	9	109686646	109686646	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	9	109686646	109686646	T	G	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	missense	c.453	p.N151K	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				113	0	0	91	13	12.5
USP20	0	genome.wustl.edu	37	9	132637711	132637711	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	9	132637711	132637711	C	T	SNP	USP20	ENST00000315480	human	ensembl	74_37	+1	known	missense	c.2171	p.A724V	0.983	smart_Pept_C19_DUSP	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,pfam_Znf_UBP,smart_Znf_UBP,smart_Pept_C19_DUSP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP20	HGNC	ENSG00000136878				80	0	0	72	7	8.86076
IFNW1	0	genome.wustl.edu	37	9	21141013	21141013	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	9	21141013	21141013	C	A	SNP	IFNW1	ENST00000380229	human	ensembl	74_37	-1	known	missense	c.557	p.R186I	0.005	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNW1	HGNC	ENSG00000177047				135	0	0	71	83	53.8961
SPATA31A6	0	genome.wustl.edu	37	9	43626680	43626680	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	9	43626680	43626680	T	G	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	missense	c.2007	p.Q669H	0.000	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775				217	0	0	171	36	17.3913
ARHGEF6	0	genome.wustl.edu	37	X	135770113	135770113	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	X	135770113	135770113	A	C	SNP	ARHGEF6	ENST00000250617	human	ensembl	74_37	-1	known	missense	c.1223	p.I408S	0.692	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_2,pfam_SH3_domain,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_SM22_calponin	-	no_errors	ARHGEF6	HGNC	ENSG00000129675				93	0	0	111	24	17.7778
MAGEA4	0	genome.wustl.edu	37	X	151092504	151092504	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	X	151092504	151092504	G	A	SNP	MAGEA4	ENST00000276344	human	ensembl	74_37	+1	known	missense	c.368	p.R123H	0.002	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA4	HGNC	ENSG00000147381				86	0	0	35	98	73.6842
ASMT	0	genome.wustl.edu	37	X	1748789	1748789	+	Silent	SNP	C	C	T			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	X	1748789	1748789	C	T	SNP	ASMT	ENST00000381241	human	ensembl	74_37	+1	known	silent	c.519	p.T173	0.996	pfam_O_MeTrfase_2,pirsf_COMT	pfam_O_MeTrfase_2,pirsf_COMT	-	no_errors	ASMT	HGNC	ENSG00000196433				231	0	0	83	100	54.6448
SCNM1	0	genome.wustl.edu	37	1	151139074	151139074	+	RNA	DEL	T	T	-			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	1	151139074	151139074	T	-	DEL	SCNM1	ENST00000471039	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.045	-	-	-	no_errors	SCNM1	HGNC	ENSG00000163156				17	0	0	23	4	14.8148
MKI67	0	genome.wustl.edu	37	10	129901328	129901329	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	10	129901328	129901329	GA	-	DEL	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	frame_shift_del	c.8776_8775	p.Q2926fs	0.000:0.000	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773				331	0	0	290	90	23.6842
PHF12	0	genome.wustl.edu	37	17	27277196	27277198	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	17	27277196	27277198	CTT	-	DEL	PHF12	ENST00000332830	human	ensembl	74_37	-1	known	in_frame_del	c.135_133	p.K45in_frame_del	1.000:1.000:1.000	superfamily_Znf_FYVE_PHD	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_SMAD_FHA_domain,smart_Znf_PHD,pfscan_FHA_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF12	HGNC	ENSG00000109118				96	0	0	97	8	7.61905
ELP2	0	genome.wustl.edu	37	18	33713280	33713302	+	Splice_Site	DEL	GTAAGTATTAACCAGATTTTAAA	GTAAGTATTAACCAGATTTTAAA	-			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	GTAAGTATTAACCAGATTTTAAA	GTAAGTATTAACCAGATTTTAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	18	33713280	33713302	GTAAGTATTAACCAGATTTTAAA	-	DEL	ELP2	ENST00000358232	human	ensembl	74_37	+1	known	splice_site_del	c.217+1_217+1	e2+1	1.000:1.000:1.000:1.000:1.000:1.000:0.999:0.965:0.101:0.070:0.030:0.001:0.000:0.000:0.000:0.001:0.002:0.001:0.000:0.000:0.000:0.000:0.000	-	-	-	no_errors	ELP2	HGNC	ENSG00000134759				38	0	0	37	2	5.12821
MKI67IP	0	genome.wustl.edu	37	2	122494398	122494415	+	In_Frame_Del	DEL	GGCCCAGCCGGGCCAGAA	GGCCCAGCCGGGCCAGAA	-			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	GGCCCAGCCGGGCCAGAA	GGCCCAGCCGGGCCAGAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	2	122494398	122494415	GGCCCAGCCGGGCCAGAA	-	DEL	MKI67IP	ENST00000285814	human	ensembl	74_37	-1	known	in_frame_del	c.29_12	p.FSGPAGP4in_frame_delL	0.014:0.012:0.006:0.000:0.000:0.000:0.002:0.000:0.000:0.116:0.162:0.137:0.149:0.130:0.000:0.000:0.000:0.000	NULL	pfam_hNIFK_FHA_Ki67_binding,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MKI67IP	HGNC	ENSG00000155438				69	0	0	50	10	16.6667
FAM208A	0	genome.wustl.edu	37	3	56657392	56657392	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	3	56657392	56657392	A	-	DEL	FAM208A	ENST00000355628	human	ensembl	74_37	-1	known	frame_shift_del	c.4503	p.D1501fs	0.920	NULL	pfam_DUF3715	-	no_errors	FAM208A	HGNC	ENSG00000163946				102	0	0	92	26	22.0339
HPSE	0	genome.wustl.edu	37	4	84230609	84230609	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	4	84230609	84230609	A	-	DEL	HPSE	ENST00000311412	human	ensembl	74_37	-1	known	frame_shift_del	c.930	p.L311fs	0.994	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE	HGNC	ENSG00000173083				115	0	0	89	12	11.8812
FNTA	0	genome.wustl.edu	37	8	42932460	42932461	+	Frame_Shift_Ins	INS	-	-	AACACCAC			TCGA-CG-4300-01A-01D-1158-08	TCGA-CG-4300-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8dfc292-64ca-4ad1-a80f-501cfe1087bf	01d85075-d33d-4289-bd05-a1f44d07bf3a	8	42932460	42932461	-	AACACCAC	INS	FNTA	ENST00000302279	human	ensembl	74_37	+1	known	frame_shift_ins	c.735_736	p.G248fs	1.000:1.000	pfscan_Prenyl_trans_a	pfam_Prenyl_trans_a,pfscan_Prenyl_trans_a	-	no_errors	FNTA	HGNC	ENSG00000168522				148	0	0	160	11	6.43275
