Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AGL	0	genome.wustl.edu	37	1	100353617	100353617	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	100353617	100353617	G	A	SNP	AGL	ENST00000294724	human	ensembl	74_37	+1	known	missense	c.2765	p.C922Y	0.995	tigrfam_Glycogen_debranch_met	pfam_AGL/Gdb1,superfamily_6-hairpin_glycosidase-like,superfamily_Glycoside_hydrolase_SF,tigrfam_Glycogen_debranch_met	-	no_errors	AGL	HGNC	ENSG00000162688				53	0	0	93	26	21.8487
SLC35A3	0	genome.wustl.edu	37	1	100480939	100480939	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	100480939	100480939	G	A	SNP	SLC35A3	ENST00000370153	human	ensembl	74_37	+1	known	missense	c.842	p.G281E	1.000	pfam_Nuc_sug_transpt,pfam_UAA,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	pfam_Nuc_sug_transpt,pfam_UAA,pfam_DMT,pfam_Tpt_PEP_trans_dom,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	-	no_errors	SLC35A3	HGNC	ENSG00000117620				75	0	0	63	16	20.2532
S1PR1	0	genome.wustl.edu	37	1	101705604	101705604	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	101705604	101705604	C	T	SNP	S1PR1	ENST00000305352	human	ensembl	74_37	+1	known	missense	c.1064	p.S355L	1.000	prints_EDG1_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_EDG1_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	S1PR1	HGNC	ENSG00000170989				152	0	0	126	58	31.5217
OLFM3	0	genome.wustl.edu	37	1	102270106	102270106	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	102270106	102270106	G	A	SNP	OLFM3	ENST00000338858	human	ensembl	74_37	-1	known	silent	c.1125	p.N375	1.000	pfam_Olfac-like,superfamily_Quino_amine_DH_bsu,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,pfam_Noelin-1,superfamily_Quino_amine_DH_bsu,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFM3	HGNC	ENSG00000118733				26	0	0	102	34	25
SLC25A24	0	genome.wustl.edu	37	1	108681756	108681756	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	108681756	108681756	G	A	SNP	SLC25A24	ENST00000565488	human	ensembl	74_37	-1	known	silent	c.1173	p.C391	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier,prints_Graves_DC	-	no_errors	SLC25A24	HGNC	ENSG00000085491				62	0	0	79	32	28.8288
SORT1	0	genome.wustl.edu	37	1	109857386	109857386	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	109857386	109857386	A	C	SNP	SORT1	ENST00000256637	human	ensembl	74_37	-1	known	missense	c.2265	p.N755K	0.973	NULL	pfam_BNR_rpt,smart_VPS10	-	no_errors	SORT1	HGNC	ENSG00000134243				41	0	0	45	17	27.4194
AMPD1	0	genome.wustl.edu	37	1	115217434	115217434	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	115217434	115217434	G	A	SNP	AMPD1	ENST00000520113	human	ensembl	74_37	-1	known	missense	c.1838	p.T613I	1.000	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD1	HGNC	ENSG00000116748				92	0	0	88	36	29.0323
WARS2	0	genome.wustl.edu	37	1	119575735	119575735	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	119575735	119575735	G	A	SNP	WARS2	ENST00000235521	human	ensembl	74_37	-1	known	silent	c.882	p.S294	0.004	pfam_aa-tRNA-synth_Ic,tigrfam_Trp-tRNA-ligase	pfam_aa-tRNA-synth_Ic,prints_Trp-tRNA-ligase,tigrfam_Trp-tRNA-ligase	-	no_errors	WARS2	HGNC	ENSG00000116874				169	0	0	155	72	31.7181
MXRA8	0	genome.wustl.edu	37	1	1290438	1290438	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	1290438	1290438	G	A	SNP	MXRA8	ENST00000445648	human	ensembl	74_37	-1	known	silent	c.573	p.H191	0.216	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	MXRA8	HGNC	ENSG00000162576				29	0	0	17	9	34.6154
ENSG00000203849	0	genome.wustl.edu	37	1	142713769	142713769	+	RNA	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	142713769	142713769	T	C	SNP	ENSG00000203849	ENST00000369381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.900	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849				16	0	0	42	16	27.5862
ANKRD35	0	genome.wustl.edu	37	1	145561338	145561338	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	145561338	145561338	G	A	SNP	ANKRD35	ENST00000355594	human	ensembl	74_37	+1	known	silent	c.1026	p.Q342	0.942	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD35	HGNC	ENSG00000198483				31	0	0	32	17	34.6939
CHD1L	0	genome.wustl.edu	37	1	146757977	146757977	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	146757977	146757977	T	C	SNP	CHD1L	ENST00000369258	human	ensembl	74_37	+1	known	missense	c.2021	p.M674T	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Macro_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	CHD1L	HGNC	ENSG00000131778				41	0	0	77	31	28.7037
GJA8	0	genome.wustl.edu	37	1	147380609	147380609	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	147380609	147380609	G	A	SNP	GJA8	ENST00000240986	human	ensembl	74_37	+1	known	missense	c.527	p.R176Q	0.999	pfam_Connexin_CCC	pfam_Connexin_N,pfam_Connexin50,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin50	-	no_errors	GJA8	HGNC	ENSG00000121634				110	0	0	115	30	20.6897
HIST2H2BB	0	genome.wustl.edu	37	1	149398889	149398889	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	149398889	149398889	C	T	SNP	HIST2H2BB	ENST00000609585	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HIST2H2BB	HGNC	ENSG00000240929				162	0	0	187	32	14.6119
SEMA6C	0	genome.wustl.edu	37	1	151108547	151108547	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	151108547	151108547	G	A	SNP	SEMA6C	ENST00000368913	human	ensembl	74_37	-1	known	missense	c.1199	p.P400L	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,pfscan_Semap_dom	-	no_errors	SEMA6C	HGNC	ENSG00000143434				113	0	0	93	27	22.5
ZNF687	0	genome.wustl.edu	37	1	151261166	151261166	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	151261166	151261166	C	T	SNP	ZNF687	ENST00000324048	human	ensembl	74_37	+1	known	missense	c.2278	p.R760C	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF687	HGNC	ENSG00000143373				176	0	0	142	48	25.2632
CGN	0	genome.wustl.edu	37	1	151491196	151491196	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	151491196	151491196	G	A	SNP	CGN	ENST00000271636	human	ensembl	74_37	+1	known	silent	c.201	p.V67	1.000	NULL	pfam_Myosin_tail	-	no_errors	CGN	HGNC	ENSG00000143375				103	0	0	95	33	25.7812
CGN	0	genome.wustl.edu	37	1	151508742	151508742	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	151508742	151508742	G	A	SNP	CGN	ENST00000271636	human	ensembl	74_37	+1	known	missense	c.3227	p.R1076Q	1.000	pfam_Myosin_tail	pfam_Myosin_tail	-	no_errors	CGN	HGNC	ENSG00000143375				75	0	0	85	27	24.1071
RORC	0	genome.wustl.edu	37	1	151785741	151785741	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	151785741	151785741	C	T	SNP	RORC	ENST00000392697	human	ensembl	74_37	-1	known	missense	c.1310	p.G437D	0.995	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_ROR_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_ROR_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	RORC	HGNC	ENSG00000143365				526	1	0.189753	477	130	21.4168
TCHHL1	0	genome.wustl.edu	37	1	152058006	152058006	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	152058006	152058006	T	G	SNP	TCHHL1	ENST00000368806	human	ensembl	74_37	-1	known	missense	c.2152	p.N718H	0.001	NULL	pfam_S100_Ca-bd_sub	-	no_errors	TCHHL1	HGNC	ENSG00000182898				149	0	0	198	68	25.5639
FLG	0	genome.wustl.edu	37	1	152286125	152286125	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	152286125	152286125	C	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.1237	p.G413R	0.000	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				449	0	0	512	175	25.4731
LCE5A	0	genome.wustl.edu	37	1	152484143	152484143	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	152484143	152484143	C	A	SNP	LCE5A	ENST00000334269	human	ensembl	74_37	+1	known	missense	c.133	p.P45T	0.003	NULL	NULL	-	no_errors	LCE5A	HGNC	ENSG00000186207				162	0	0	223	36	13.8996
S100A7A	0	genome.wustl.edu	37	1	153390650	153390650	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	153390650	153390650	G	T	SNP	S100A7A	ENST00000329256	human	ensembl	74_37	+1	known	missense	c.92	p.S31I	0.000	pfam_S100_Ca-bd_sub	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	S100A7A	HGNC	ENSG00000184330				180	0	0	192	57	22.8916
S100A14	0	genome.wustl.edu	37	1	153587727	153587727	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	153587727	153587727	A	G	SNP	S100A14	ENST00000344616	human	ensembl	74_37	-1	known	missense	c.161	p.L54P	1.000	pfam_S100_Ca-bd_sub	pfam_S100_Ca-bd_sub	-	no_errors	S100A14	HGNC	ENSG00000189334				81	0	0	89	13	12.7451
RAB13	0	genome.wustl.edu	37	1	153954777	153954777	+	RNA	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	153954777	153954777	C	A	SNP	RAB13	ENST00000462680	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RAB13	HGNC	ENSG00000143545				169	1	0.588235	148	25	14.4509
RAB13	0	genome.wustl.edu	37	1	153955391	153955391	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	153955391	153955391	C	T	SNP	RAB13	ENST00000462680	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RAB13	HGNC	ENSG00000143545				12	0	0	15	4	21.0526
KCNN3	0	genome.wustl.edu	37	1	154680583	154680583	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	154680583	154680583	G	T	SNP	KCNN3	ENST00000271915	human	ensembl	74_37	-1	novel	missense	c.2065	p.L689M	1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN3	HGNC	ENSG00000143603				191	0	0	186	46	19.8276
ADAM15	0	genome.wustl.edu	37	1	155034995	155034995	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	155034995	155034995	G	A	SNP	ADAM15	ENST00000461234	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADAM15	HGNC	ENSG00000143537				26	0	0	24	10	29.4118
THBS3	0	genome.wustl.edu	37	1	155167338	155167338	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	155167338	155167338	G	A	SNP	THBS3	ENST00000368378	human	ensembl	74_37	-1	known	silent	c.2415	p.Y805	0.971	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl_sf	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS3	HGNC	ENSG00000169231				108	0	0	105	38	26.5734
CLK2	0	genome.wustl.edu	37	1	155237889	155237889	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	155237889	155237889	T	C	SNP	CLK2	ENST00000368361	human	ensembl	74_37	-1	known	missense	c.583	p.I195V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CLK2	HGNC	ENSG00000176444				191	0	0	211	24	10.2128
PKLR	0	genome.wustl.edu	37	1	155264997	155264997	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	155264997	155264997	C	T	SNP	PKLR	ENST00000342741	human	ensembl	74_37	-1	known	missense	c.604	p.V202M	1.000	pfam_Pyrv_Knase_brl,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,superfamily_Pyrv_Knase-like_insert_dom,tigrfam_Pyr_Knase	pfam_Pyrv_Knase_brl,pfam_Pyrv_Knase_C,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,superfamily_Pyrv_Knase_C,superfamily_Pyrv_Knase-like_insert_dom,prints_Pyr_Knase,tigrfam_Pyr_Knase	-	no_errors	PKLR	HGNC	ENSG00000143627				251	0	0	249	95	27.6163
ASH1L	0	genome.wustl.edu	37	1	155449273	155449273	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	155449273	155449273	G	A	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.3388	p.P1130S	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				63	0	0	90	26	22.4138
ASH1L	0	genome.wustl.edu	37	1	155451950	155451950	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	155451950	155451950	C	T	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	silent	c.711	p.P237	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				119	0	0	142	55	27.9188
PAQR6	0	genome.wustl.edu	37	1	156214585	156214585	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	156214585	156214585	C	T	SNP	PAQR6	ENST00000335852	human	ensembl	74_37	-1	known	missense	c.409	p.E137K	0.997	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR6	HGNC	ENSG00000160781				58	0	0	60	12	16.6667
ARHGEF11	0	genome.wustl.edu	37	1	156909822	156909822	+	RNA	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	156909822	156909822	C	A	SNP	ARHGEF11	ENST00000487682	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARHGEF11	HGNC	ENSG00000132694				17	0	0	28	7	20
PYHIN1	0	genome.wustl.edu	37	1	158908274	158908274	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	158908274	158908274	C	T	SNP	PYHIN1	ENST00000368140	human	ensembl	74_37	+1	known	missense	c.353	p.A118V	0.000	NULL	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	PYHIN1	HGNC	ENSG00000163564				89	0	0	98	29	22.8346
PYHIN1	0	genome.wustl.edu	37	1	158911818	158911818	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	158911818	158911818	C	T	SNP	PYHIN1	ENST00000368140	human	ensembl	74_37	+1	known	nonsense	c.631	p.R211*	0.000	pfscan_HIN200/IF120x	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	PYHIN1	HGNC	ENSG00000163564				48	0	0	82	28	25.4545
IFI16	0	genome.wustl.edu	37	1	159024668	159024668	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	159024668	159024668	A	T	SNP	IFI16	ENST00000295809	human	ensembl	74_37	+1	known	missense	c.2335	p.T779S	0.047	NULL	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	IFI16	HGNC	ENSG00000163565				9	0	0	4	8	66.6667
PEX19	0	genome.wustl.edu	37	1	160251955	160251955	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	160251955	160251955	G	T	SNP	PEX19	ENST00000532643	human	ensembl	74_37	-1	known	missense	c.382	p.H128N	1.000	NULL	NULL	-	no_errors	PEX19	HGNC	ENSG00000162735				100	1	0.990099	92	39	29.771
FCRLA	0	genome.wustl.edu	37	1	161680505	161680505	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	161680505	161680505	T	C	SNP	FCRLA	ENST00000540926	human	ensembl	74_37	+1	known	missense	c.80	p.V27A	0.001	NULL	smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	FCRLA	HGNC	ENSG00000132185				38	0	0	33	17	34
FCRLB	0	genome.wustl.edu	37	1	161695962	161695962	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	161695962	161695962	G	A	SNP	FCRLB	ENST00000495397	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	FCRLB	HGNC	ENSG00000162746				19	0	0	27	7	20.5882
OLFML2B	0	genome.wustl.edu	37	1	161953686	161953686	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	161953686	161953686	C	T	SNP	OLFML2B	ENST00000294794	human	ensembl	74_37	-1	known	missense	c.2032	p.V678I	1.000	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745				174	0	0	178	55	23.6052
CROCC	0	genome.wustl.edu	37	1	17281945	17281945	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	17281945	17281945	C	T	SNP	CROCC	ENST00000375541	human	ensembl	74_37	+1	known	nonsense	c.3604	p.R1202*	1.000	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CROCC	HGNC	ENSG00000058453				18	0	0	15	8	34.7826
RC3H1	0	genome.wustl.edu	37	1	173951935	173951935	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	173951935	173951935	C	T	SNP	RC3H1	ENST00000258349	human	ensembl	74_37	-1	known	missense	c.698	p.R233Q	1.000	NULL	pfam_Znf_CCCH,smart_Znf_RING,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	RC3H1	HGNC	ENSG00000135870				122	0	0	117	45	27.7778
RABGAP1L	0	genome.wustl.edu	37	1	174780992	174780992	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	174780992	174780992	A	G	SNP	RABGAP1L	ENST00000251507	human	ensembl	74_37	+1	known	missense	c.2234	p.Q745R	1.000	superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1L	HGNC	ENSG00000152061				79	0	0	119	21	15
ASTN1	0	genome.wustl.edu	37	1	176918359	176918359	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	176918359	176918359	C	T	SNP	ASTN1	ENST00000367654	human	ensembl	74_37	-1	known	silent	c.2040	p.P680	0.478	smart_EG-like_dom	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092				93	0	0	92	17	15.5963
RCC2	0	genome.wustl.edu	37	1	17747226	17747226	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	17747226	17747226	A	G	SNP	RCC2	ENST00000375433	human	ensembl	74_37	-1	known	silent	c.843	p.P281	0.998	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,prints_Reg_chr_condens,pfscan_Reg_chr_condens	-	no_errors	RCC2	HGNC	ENSG00000179051				119	0	0	107	31	22.4638
KIAA1614	0	genome.wustl.edu	37	1	180886022	180886022	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	180886022	180886022	C	T	SNP	KIAA1614	ENST00000367588	human	ensembl	74_37	+1	known	silent	c.783	p.S261	0.000	NULL	NULL	-	no_errors	KIAA1614	HGNC	ENSG00000135835				376	1	0.265252	338	106	23.8739
COLGALT2	0	genome.wustl.edu	37	1	183908027	183908027	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	183908027	183908027	C	A	SNP	COLGALT2	ENST00000361927	human	ensembl	74_37	-1	known	silent	c.1749	p.V583	1.000	NULL	pfam_Glyco_trans_25	-	no_errors	COLGALT2	HGNC	ENSG00000198756				124	0	0	138	46	25
TRMT1L	0	genome.wustl.edu	37	1	185106864	185106864	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	185106864	185106864	A	T	SNP	TRMT1L	ENST00000367506	human	ensembl	74_37	-1	known	missense	c.1387	p.L463M	0.989	pfam_TRM1	pfam_TRM1,pfam_tRNA_Trfase_Trm5/Tyw2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	TRMT1L	HGNC	ENSG00000121486				129	0	0	174	49	21.9731
CDC73	0	genome.wustl.edu	37	1	193107230	193107230	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	193107230	193107230	C	T	SNP	CDC73	ENST00000367435	human	ensembl	74_37	+1	known	missense	c.439	p.R147C	1.000	NULL	pfam_RNA_pol_access_fac_Cdc73	-	no_errors	CDC73	HGNC	ENSG00000134371				197	0	0	215	69	24.2958
CFH	0	genome.wustl.edu	37	1	196648770	196648770	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	196648770	196648770	C	T	SNP	CFH	ENST00000367429	human	ensembl	74_37	+1	known	missense	c.637	p.P213S	0.123	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971				18	0	0	44	6	12
F13B	0	genome.wustl.edu	37	1	197026313	197026313	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	197026313	197026313	A	G	SNP	F13B	ENST00000367412	human	ensembl	74_37	-1	known	missense	c.1001	p.V334A	0.000	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	F13B	HGNC	ENSG00000143278				24	0	0	88	27	23.4783
KIF14	0	genome.wustl.edu	37	1	200522567	200522567	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	200522567	200522567	G	A	SNP	KIF14	ENST00000367350	human	ensembl	74_37	-1	known	silent	c.4896	p.S1632	0.000	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF14	HGNC	ENSG00000118193				181	0	0	241	75	23.7342
PPP1R12B	0	genome.wustl.edu	37	1	202318225	202318225	+	Silent	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	202318225	202318225	T	G	SNP	PPP1R12B	ENST00000336894	human	ensembl	74_37	+1	known	silent	c.246	p.A82	0.549	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_12A/B/C_euk,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_12A/B/C_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R12B	HGNC	ENSG00000077157				45	0	0	51	15	22.7273
TMCC2	0	genome.wustl.edu	37	1	205238752	205238752	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	205238752	205238752	C	T	SNP	TMCC2	ENST00000358024	human	ensembl	74_37	+1	known	silent	c.1422	p.G474	1.000	pfam_Predicted_TM_coiled-coil_2	pfam_Predicted_TM_coiled-coil_2,superfamily_t-SNARE	-	no_errors	TMCC2	HGNC	ENSG00000133069				100	0	0	118	7	5.6
KLHDC8A	0	genome.wustl.edu	37	1	205312590	205312590	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	205312590	205312590	C	T	SNP	KLHDC8A	ENST00000367155	human	ensembl	74_37	-1	known	missense	c.143	p.C48Y	1.000	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,smart_Kelch_1	-	no_errors	KLHDC8A	HGNC	ENSG00000162873				93	0	0	84	24	22.2222
CTSE	0	genome.wustl.edu	37	1	206328752	206328752	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	206328752	206328752	C	T	SNP	CTSE	ENST00000361052	human	ensembl	74_37	+1	known	silent	c.834	p.S278	0.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	CTSE	HGNC	ENSG00000196188				92	0	0	112	38	25.3333
CR1L	0	genome.wustl.edu	37	1	207881608	207881608	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	207881608	207881608	C	T	SNP	CR1L	ENST00000508064	human	ensembl	74_37	+1	known	nonsense	c.1414	p.Q472*	0.352	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1L	HGNC	ENSG00000197721				89	0	0	135	44	24.581
SLC30A1	0	genome.wustl.edu	37	1	211751694	211751694	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	211751694	211751694	G	A	SNP	SLC30A1	ENST00000367001	human	ensembl	74_37	-1	known	silent	c.261	p.I87	1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A1	HGNC	ENSG00000170385				25	0	0	31	4	11.4286
CENPF	0	genome.wustl.edu	37	1	214814768	214814768	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	214814768	214814768	T	C	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	silent	c.3087	p.C1029	1.000	NULL	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724				68	0	0	133	33	19.8795
GPATCH2	0	genome.wustl.edu	37	1	217671533	217671533	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	217671533	217671533	G	A	SNP	GPATCH2	ENST00000485274	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GPATCH2	HGNC	ENSG00000092978				20	0	0	44	12	21.4286
HSPG2	0	genome.wustl.edu	37	1	22174254	22174254	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	22174254	22174254	G	A	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	silent	c.7953	p.C2651	0.079	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				19	0	0	28	5	15.1515
DISP1	0	genome.wustl.edu	37	1	223156446	223156446	+	Silent	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	223156446	223156446	A	C	SNP	DISP1	ENST00000284476	human	ensembl	74_37	+1	novel	silent	c.534	p.P178	1.000	NULL	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	DISP1	HGNC	ENSG00000154309				69	0	0	98	28	22.2222
DISP1	0	genome.wustl.edu	37	1	223176379	223176379	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	223176379	223176379	G	A	SNP	DISP1	ENST00000284476	human	ensembl	74_37	+1	novel	missense	c.1640	p.R547H	1.000	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	DISP1	HGNC	ENSG00000154309				93	0	0	129	30	18.8679
PSEN2	0	genome.wustl.edu	37	1	227075861	227075861	+	Splice_Site	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	227075861	227075861	T	C	SNP	PSEN2	ENST00000391872	human	ensembl	74_37	+1	known	splice_site	c.665+2	e5+2	1.000	-	-	-	no_errors	PSEN2	HGNC	ENSG00000143801				97	0	0	82	38	31.6667
ZBTB40	0	genome.wustl.edu	37	1	22843935	22843935	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	22843935	22843935	C	T	SNP	ZBTB40	ENST00000375647	human	ensembl	74_37	+1	known	silent	c.2811	p.S937	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB40	HGNC	ENSG00000184677				76	0	0	90	11	10.8911
OBSCN	0	genome.wustl.edu	37	1	228476440	228476440	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	228476440	228476440	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.10190	p.R3397H	0.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				104	0	0	78	35	30.9735
OBSCN	0	genome.wustl.edu	37	1	228496852	228496852	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	228496852	228496852	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	silent	c.12792	p.G4264	0.999	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				16	0	0	9	10	52.6316
MAP10	0	genome.wustl.edu	37	1	232941415	232941415	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	232941415	232941415	G	A	SNP	MAP10	ENST00000418460	human	ensembl	74_37	+1	known	missense	c.646	p.G216S	0.381	NULL	NULL	-	no_errors	MAP10	HGNC	ENSG00000212916				11	0	0	21	9	30
KIAA1804	0	genome.wustl.edu	37	1	233497844	233497844	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	233497844	233497844	C	T	SNP	KIAA1804	ENST00000366624	human	ensembl	74_37	+1	known	nonsense	c.1357	p.Q453*	1.000	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674				33	0	0	30	12	28.5714
RYR2	0	genome.wustl.edu	37	1	237872219	237872219	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	237872219	237872219	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.9957	p.P3319	0.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				26	0	0	25	5	16.6667
RYR2	0	genome.wustl.edu	37	1	237947592	237947592	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	237947592	237947592	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.12598	p.E4200K	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				75	0	0	124	36	22.5
GRHL3	0	genome.wustl.edu	37	1	24669458	24669458	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	24669458	24669458	G	A	SNP	GRHL3	ENST00000350501	human	ensembl	74_37	+1	known	silent	c.1362	p.T454	0.788	NULL	pfam_CP2,superfamily_C2_dom	-	no_errors	GRHL3	HGNC	ENSG00000158055				291	0	0	236	90	27.6074
CNST	0	genome.wustl.edu	37	1	246797236	246797236	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	246797236	246797236	A	G	SNP	CNST	ENST00000366513	human	ensembl	74_37	+1	known	silent	c.627	p.A209	1.000	NULL	NULL	-	no_errors	CNST	HGNC	ENSG00000162852				78	0	0	57	19	25
ZNF496	0	genome.wustl.edu	37	1	247464565	247464565	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	247464565	247464565	C	T	SNP	ZNF496	ENST00000366498	human	ensembl	74_37	-1	known	silent	c.1128	p.P376	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF496	HGNC	ENSG00000162714				70	0	0	78	22	22
OR11L1	0	genome.wustl.edu	37	1	248005039	248005039	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	248005039	248005039	G	A	SNP	OR11L1	ENST00000355784	human	ensembl	74_37	-1	known	nonsense	c.160	p.R54*	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR11L1	HGNC	ENSG00000197591				67	0	0	37	10	21.2766
OR2L8	0	genome.wustl.edu	37	1	248112877	248112877	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	248112877	248112877	T	C	SNP	OR2L8	ENST00000357191	human	ensembl	74_37	+1	known	missense	c.718	p.C240R	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L8	HGNC	ENSG00000196936				136	1	0.729927	247	17	6.43939
OR2T2	0	genome.wustl.edu	37	1	248616240	248616240	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	248616240	248616240	C	G	SNP	OR2T2	ENST00000342927	human	ensembl	74_37	+1	known	missense	c.142	p.L48V	0.099	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240				82	0	0	169	23	11.9792
FGR	0	genome.wustl.edu	37	1	27949552	27949552	+	Splice_Site	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	27949552	27949552	C	T	SNP	FGR	ENST00000374003	human	ensembl	74_37	-1	known	splice_site	c.329+1	e2+1	1.000	-	-	-	no_errors	FGR	HGNC	ENSG00000000938				58	0	0	52	15	22.3881
LAPTM5	0	genome.wustl.edu	37	1	31208095	31208095	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	31208095	31208095	G	T	SNP	LAPTM5	ENST00000294507	human	ensembl	74_37	-1	known	nonsense	c.624	p.C208*	0.958	pfam_LAPTM4/5,tigrfam_LAPTM_4A/5	pfam_LAPTM4/5,tigrfam_LAPTM_4A/5	-	no_errors	LAPTM5	HGNC	ENSG00000162511				287	1	0.347222	250	69	21.6301
COL16A1	0	genome.wustl.edu	37	1	32145288	32145288	+	Splice_Site	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	32145288	32145288	T	C	SNP	COL16A1	ENST00000271069	human	ensembl	74_37	-1	known	splice_site	c.2716-2	e42-2	0.997	-	-	-	no_errors	COL16A1	HGNC	ENSG00000084636				276	0	0	214	64	23.0216
CSMD2	0	genome.wustl.edu	37	1	34043061	34043061	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	34043061	34043061	C	T	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.7411	p.A2471T	0.985	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904				82	0	0	92	19	17.1171
MEGF6	0	genome.wustl.edu	37	1	3418428	3418428	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	3418428	3418428	G	C	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	missense	c.2246	p.A749G	0.951	smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591				53	0	0	36	10	21.7391
C1orf94	0	genome.wustl.edu	37	1	34663184	34663184	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	34663184	34663184	C	T	SNP	C1orf94	ENST00000488417	human	ensembl	74_37	+1	known	missense	c.679	p.R227C	0.000	NULL	NULL	-	no_errors	C1orf94	HGNC	ENSG00000142698				86	0	0	85	19	18.2692
AGO4	0	genome.wustl.edu	37	1	36307280	36307280	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	36307280	36307280	C	T	SNP	AGO4	ENST00000373210	human	ensembl	74_37	+1	known	missense	c.2104	p.P702S	1.000	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO4	HGNC	ENSG00000134698				143	0	0	149	46	23.5897
AGO1	0	genome.wustl.edu	37	1	36358210	36358210	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	36358210	36358210	C	T	SNP	AGO1	ENST00000373204	human	ensembl	74_37	+1	known	missense	c.262	p.R88C	1.000	superfamily_PAZ_dom	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO1	HGNC	ENSG00000092847				88	0	0	88	21	19.2661
AGO3	0	genome.wustl.edu	37	1	36432609	36432609	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	36432609	36432609	G	A	SNP	AGO3	ENST00000373191	human	ensembl	74_37	+1	known	missense	c.245	p.R82H	1.000	NULL	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO3	HGNC	ENSG00000126070				68	0	0	66	21	24.1379
MFSD2A	0	genome.wustl.edu	37	1	40433301	40433301	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	40433301	40433301	T	G	SNP	MFSD2A	ENST00000372809	human	ensembl	74_37	+1	known	missense	c.1052	p.L351R	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD2A	HGNC	ENSG00000168389				155	0	0	160	40	20
COL9A2	0	genome.wustl.edu	37	1	40766913	40766913	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	40766913	40766913	C	T	SNP	COL9A2	ENST00000372748	human	ensembl	74_37	-1	known	missense	c.2011	p.G671R	1.000	NULL	pfam_Collagen	-	no_errors	COL9A2	HGNC	ENSG00000049089				61	0	0	68	14	17.0732
SZT2	0	genome.wustl.edu	37	1	43903494	43903494	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	43903494	43903494	C	T	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	silent	c.6258	p.S2086	0.686	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198				150	0	0	146	43	22.7513
B4GALT2	0	genome.wustl.edu	37	1	44447558	44447558	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	44447558	44447558	C	T	SNP	B4GALT2	ENST00000309519	human	ensembl	74_37	+1	known	missense	c.598	p.R200W	1.000	pfam_Galactosyl_T_C	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT2	HGNC	ENSG00000117411				77	0	0	79	17	17.7083
TMEM53	0	genome.wustl.edu	37	1	45120723	45120723	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	45120723	45120723	G	A	SNP	TMEM53	ENST00000372237	human	ensembl	74_37	-1	known	silent	c.342	p.N114	0.249	pfam_DUF829_TMEM53	pfam_DUF829_TMEM53	-	no_errors	TMEM53	HGNC	ENSG00000126106				44	0	0	56	21	27.2727
HPDL	0	genome.wustl.edu	37	1	45793721	45793721	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	45793721	45793721	G	T	SNP	HPDL	ENST00000334815	human	ensembl	74_37	+1	known	missense	c.901	p.G301W	0.999	pirsf_4OHPhenylPyrv_dOase	pirsf_4OHPhenylPyrv_dOase	-	no_errors	HPDL	HGNC	ENSG00000186603				97	0	0	89	33	27.0492
GPX7	0	genome.wustl.edu	37	1	53074041	53074041	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	53074041	53074041	C	A	SNP	GPX7	ENST00000361314	human	ensembl	74_37	+1	known	missense	c.508	p.P170T	1.000	superfamily_Thioredoxin-like_fold,pirsf_Glutathione_peroxidase,tigrfam_Glut_perox_Gpx7	pfam_Glutathione_peroxidase,pfam_AhpC/TSA,superfamily_Thioredoxin-like_fold,pirsf_Glutathione_peroxidase,prints_Glutathione_peroxidase,tigrfam_Glut_perox_Gpx7	-	no_errors	GPX7	HGNC	ENSG00000116157				190	0	0	187	51	21.4286
FAM151A	0	genome.wustl.edu	37	1	55075579	55075579	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	55075579	55075579	C	T	SNP	FAM151A	ENST00000302250	human	ensembl	74_37	-1	known	missense	c.1120	p.E374K	0.857	NULL	pfam_DUF2181	-	no_errors	FAM151A	HGNC	ENSG00000162391				56	0	0	65	23	26.1364
TMEM61	0	genome.wustl.edu	37	1	55457540	55457540	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	55457540	55457540	G	A	SNP	TMEM61	ENST00000371268	human	ensembl	74_37	+1	known	missense	c.397	p.E133K	0.317	NULL	NULL	-	no_errors	TMEM61	HGNC	ENSG00000143001				168	0	0	163	58	26.2443
NPHP4	0	genome.wustl.edu	37	1	6038351	6038351	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	6038351	6038351	C	T	SNP	NPHP4	ENST00000378156	human	ensembl	74_37	-1	known	silent	c.258	p.P86	0.000	NULL	NULL	-	no_errors	NPHP4	HGNC	ENSG00000131697				16	0	0	30	6	16.6667
JAK1	0	genome.wustl.edu	37	1	65335080	65335080	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	65335080	65335080	G	A	SNP	JAK1	ENST00000342505	human	ensembl	74_37	-1	known	silent	c.561	p.N187	0.166	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak1,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	JAK1	HGNC	ENSG00000162434				97	0	0	114	38	25
NOL9	0	genome.wustl.edu	37	1	6586028	6586028	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	6586028	6586028	C	T	SNP	NOL9	ENST00000377705	human	ensembl	74_37	-1	known	silent	c.1995	p.T665	0.323	NULL	pfam_Pre-mRNA_cleavage_cplxII_Clp1,superfamily_P-loop_NTPase	-	no_errors	NOL9	HGNC	ENSG00000162408				182	0	0	138	59	29.9492
IL12RB2	0	genome.wustl.edu	37	1	67861543	67861543	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	67861543	67861543	C	T	SNP	IL12RB2	ENST00000262345	human	ensembl	74_37	+1	known	missense	c.2360	p.T787M	0.000	NULL	pfam_Fibronectin_type3,pfam_IgC2-like_lig-bd,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL12RB2	HGNC	ENSG00000081985				294	0	0	301	89	22.8205
SERBP1	0	genome.wustl.edu	37	1	67895978	67895978	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	67895978	67895978	A	G	SNP	SERBP1	ENST00000370995	human	ensembl	74_37	-1	known	silent	c.6	p.P2	1.000	NULL	pfam_HABP4_PAIRBP1-bd	-	no_errors	SERBP1	HGNC	ENSG00000142864				114	0	0	114	35	23.4899
LRRC7	0	genome.wustl.edu	37	1	70504915	70504915	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	70504915	70504915	G	T	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	silent	c.3294	p.V1098	0.031	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122				96	0	0	156	57	26.7606
CAMTA1	0	genome.wustl.edu	37	1	7725039	7725039	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	7725039	7725039	G	A	SNP	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	missense	c.2432	p.R811Q	0.810	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735				243	1	0.409836	245	104	29.7994
FUBP1	0	genome.wustl.edu	37	1	78428529	78428529	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	78428529	78428529	T	C	SNP	FUBP1	ENST00000436586	human	ensembl	74_37	-1	known	missense	c.1333	p.M445V	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,pfam_KH_dom_type_2,pfam_DUF1897,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FUBP1	HGNC	ENSG00000162613				136	0	0	154	38	19.7917
RERE	0	genome.wustl.edu	37	1	8420188	8420188	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	8420188	8420188	C	T	SNP	RERE	ENST00000337907	human	ensembl	74_37	-1	known	missense	c.3379	p.A1127T	1.000	pfam_Atrophin-like	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599				15	0	0	14	3	17.6471
PRKACB	0	genome.wustl.edu	37	1	84650786	84650786	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	84650786	84650786	A	G	SNP	PRKACB	ENST00000370685	human	ensembl	74_37	+1	known	missense	c.481	p.N161D	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACB	HGNC	ENSG00000142875				61	0	0	132	53	28.6486
ZNHIT6	0	genome.wustl.edu	37	1	86173931	86173931	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	86173931	86173931	C	A	SNP	ZNHIT6	ENST00000370574	human	ensembl	74_37	-1	known	nonsense	c.37	p.G13*	0.026	NULL	pfam_Znf_HIT,pfscan_Znf_HIT	-	no_errors	ZNHIT6	HGNC	ENSG00000117174				99	0	0	125	32	20.3822
GBP6	0	genome.wustl.edu	37	1	89847424	89847424	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	89847424	89847424	C	T	SNP	GBP6	ENST00000370456	human	ensembl	74_37	+1	known	missense	c.1043	p.T348M	0.838	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP6	HGNC	ENSG00000183347				48	0	0	81	28	25.6881
AGRN	0	genome.wustl.edu	37	1	989920	989920	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	989920	989920	C	T	SNP	AGRN	ENST00000379370	human	ensembl	74_37	+1	known	missense	c.5969	p.A1990V	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Agrin_NtA,pfam_Kazal_dom,pfam_EGF_laminin,pfam_SEA_dom,pfam_EG-like_dom,superfamily_TIMP-like_OB-fold,superfamily_ConA-like_lec_gl_sf,smart_FacI_MAC,smart_Fol_N,smart_Kazal_dom,smart_EG-like_dom,smart_EGF_laminin,smart_SEA_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Agrin_NtA,pfscan_SEA_dom	-	no_errors	AGRN	HGNC	ENSG00000188157				13	0	0	18	4	18.1818
HPS1	0	genome.wustl.edu	37	10	100185361	100185361	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	100185361	100185361	G	A	SNP	HPS1	ENST00000325103	human	ensembl	74_37	-1	known	silent	c.1272	p.L424	0.000	NULL	NULL	-	no_errors	HPS1	HGNC	ENSG00000107521				24	0	0	35	12	25.5319
DNMBP	0	genome.wustl.edu	37	10	101639896	101639896	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	101639896	101639896	G	T	SNP	DNMBP	ENST00000342239	human	ensembl	74_37	-1	known	missense	c.4292	p.S1431Y	0.001	NULL	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_BAR_dom,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain,prints_p67phox,prints_Spectrin_alpha_SH3	-	no_errors	DNMBP	HGNC	ENSG00000107554				259	0	0	260	64	19.7531
HPS6	0	genome.wustl.edu	37	10	103826053	103826053	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	103826053	103826053	C	A	SNP	HPS6	ENST00000299238	human	ensembl	74_37	+1	known	silent	c.822	p.A274	0.607	pirsf_BLOC-2_complex_Hps6_subunit	pirsf_BLOC-2_complex_Hps6_subunit	-	no_errors	HPS6	HGNC	ENSG00000166189				96	0	0	105	28	21.0526
CELF2	0	genome.wustl.edu	37	10	11363317	11363317	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	11363317	11363317	A	C	SNP	CELF2	ENST00000450189	human	ensembl	74_37	+1	known	missense	c.1262	p.Q421P	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA	-	no_errors	CELF2	HGNC	ENSG00000048740				43	0	0	59	29	32.9545
TDRD1	0	genome.wustl.edu	37	10	115981158	115981158	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	115981158	115981158	T	C	SNP	TDRD1	ENST00000251864	human	ensembl	74_37	+1	known	missense	c.2813	p.V938A	0.981	pfam_Tudor	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627				61	0	0	101	34	25.1852
GFRA1	0	genome.wustl.edu	37	10	118030602	118030602	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	118030602	118030602	G	A	SNP	GFRA1	ENST00000355422	human	ensembl	74_37	-1	known	silent	c.66	p.S22	1.000	pirsf_Glial_neurotroph_fac_rcpt_a1/2	pfam_GDNF/GAS1,smart_GDNF/GAS1,pirsf_Glial_neurotroph_fac_rcpt_a1/2,prints_GDNF_rcpt,prints_GDNF_rcpt_A1	-	no_errors	GFRA1	HGNC	ENSG00000151892				48	0	0	49	10	16.9492
PRDX3	0	genome.wustl.edu	37	10	120928781	120928781	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	120928781	120928781	C	T	SNP	PRDX3	ENST00000298510	human	ensembl	74_37	-1	known	missense	c.625	p.V209M	1.000	superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Redoxin,pfam_Peroxiredoxin_C,superfamily_Thioredoxin-like_fold	-	no_errors	PRDX3	HGNC	ENSG00000165672				69	0	0	64	29	31.1828
CPXM2	0	genome.wustl.edu	37	10	125601919	125601919	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	125601919	125601919	C	T	SNP	CPXM2	ENST00000241305	human	ensembl	74_37	-1	known	missense	c.599	p.R200Q	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	CPXM2	HGNC	ENSG00000121898				81	0	0	71	18	20.2247
CHST15	0	genome.wustl.edu	37	10	125805706	125805706	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	125805706	125805706	C	T	SNP	CHST15	ENST00000346248	human	ensembl	74_37	-1	known	missense	c.23	p.C8Y	1.000	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	CHST15	HGNC	ENSG00000182022				83	0	0	84	16	16
LHPP	0	genome.wustl.edu	37	10	126172753	126172753	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	126172753	126172753	G	A	SNP	LHPP	ENST00000368842	human	ensembl	74_37	+1	known	silent	c.171	p.S57	0.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_HAD-SF_hydro_IIA_hyp2,tigrfam_HAD-SF_hydro_IIA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_HAD-SF_hydro_IIA_hyp2,tigrfam_HAD-SF_hydro_IIA	-	no_errors	LHPP	HGNC	ENSG00000107902				57	0	0	56	31	35.6322
C10orf137	0	genome.wustl.edu	37	10	127436239	127436239	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	127436239	127436239	G	A	SNP	C10orf137	ENST00000356792	human	ensembl	74_37	+1	known	silent	c.2949	p.P983	0.007	NULL	NULL	-	no_errors	C10orf137	HGNC	ENSG00000107938				73	0	0	74	39	34.5133
ADARB2	0	genome.wustl.edu	37	10	1279635	1279635	+	Splice_Site	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	1279635	1279635	C	T	SNP	ADARB2	ENST00000381312	human	ensembl	74_37	-1	known	splice_site	c.1513+1	e6+1	1.000	-	-	-	no_errors	ADARB2	HGNC	ENSG00000185736				191	0	0	166	64	27.8261
FAM196A	0	genome.wustl.edu	37	10	128974523	128974523	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	128974523	128974523	T	C	SNP	FAM196A	ENST00000522781	human	ensembl	74_37	-1	known	missense	c.137	p.Q46R	1.000	NULL	NULL	-	no_errors	FAM196A	HGNC	ENSG00000188916				281	0	0	302	90	22.9592
CLRN3	0	genome.wustl.edu	37	10	129676427	129676427	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	129676427	129676427	C	T	SNP	CLRN3	ENST00000368671	human	ensembl	74_37	-1	known	missense	c.667	p.G223R	0.991	NULL	NULL	-	no_errors	CLRN3	HGNC	ENSG00000180745				144	0	0	127	48	27.4286
KNDC1	0	genome.wustl.edu	37	10	134996942	134996942	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	134996942	134996942	C	T	SNP	KNDC1	ENST00000368572	human	ensembl	74_37	+1	known	missense	c.455	p.A152V	0.995	superfamily_Kinase-like_dom,smart_KIND	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC	ENSG00000171798				17	0	0	14	4	22.2222
KNDC1	0	genome.wustl.edu	37	10	135026413	135026413	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	135026413	135026413	C	T	SNP	KNDC1	ENST00000368572	human	ensembl	74_37	+1	known	missense	c.4436	p.T1479M	0.992	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC	ENSG00000171798				49	0	0	44	11	20
CUBN	0	genome.wustl.edu	37	10	16990509	16990509	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	16990509	16990509	C	T	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.5177	p.G1726D	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				38	0	0	46	10	17.8571
MRC1	0	genome.wustl.edu	37	10	18138557	18138557	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	18138557	18138557	T	C	SNP	MRC1	ENST00000239761	human	ensembl	74_37	+1	known	silent	c.1113	p.G371	0.111	pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	pfam_C-type_lectin,pfam_FN_type2_col-bd,pfam_Ricin_B_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin,prints_AntifreezeII	-	no_errors	MRC1	HGNC	ENSG00000120586				102	0	0	141	34	19.4286
KIAA1217	0	genome.wustl.edu	37	10	24825761	24825761	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	24825761	24825761	G	A	SNP	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	missense	c.3473	p.R1158Q	1.000	NULL	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549				137	0	0	180	62	25.6198
GPR158	0	genome.wustl.edu	37	10	25886723	25886723	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	25886723	25886723	C	T	SNP	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	missense	c.2168	p.A723V	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025				85	0	0	175	48	21.5247
FZD8	0	genome.wustl.edu	37	10	35929020	35929020	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	35929020	35929020	C	T	SNP	FZD8	ENST00000374694	human	ensembl	74_37	-1	known	nonsense	c.1338	p.W446*	1.000	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD8	HGNC	ENSG00000177283				19	0	0	23	11	32.3529
ZNF248	0	genome.wustl.edu	37	10	38120692	38120692	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	38120692	38120692	C	T	SNP	ZNF248	ENST00000357328	human	ensembl	74_37	-1	known	missense	c.1591	p.E531K	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF248	HGNC	ENSG00000198105				80	0	0	138	44	24.1758
BMS1	0	genome.wustl.edu	37	10	43292210	43292210	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	43292210	43292210	T	C	SNP	BMS1	ENST00000374518	human	ensembl	74_37	+1	known	silent	c.1518	p.D506	0.999	superfamily_P-loop_NTPase	pfam_BMS1_TSR1_C,pfam_AARP2CN,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AARP2CN	-	no_errors	BMS1	HGNC	ENSG00000165733				84	0	0	100	32	24.2424
ZNF239	0	genome.wustl.edu	37	10	44052449	44052449	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	44052449	44052449	G	A	SNP	ZNF239	ENST00000306006	human	ensembl	74_37	-1	known	missense	c.1079	p.S360L	0.994	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF239	HGNC	ENSG00000196793				67	0	0	113	24	17.5182
GPRIN2	0	genome.wustl.edu	37	10	46999541	46999541	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	46999541	46999541	C	T	SNP	GPRIN2	ENST00000374314	human	ensembl	74_37	+1	known	silent	c.661	p.L221	0.190	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175				54	0	0	77	17	18.0851
NPY4R	0	genome.wustl.edu	37	10	47087175	47087175	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	47087175	47087175	C	T	SNP	NPY4R	ENST00000374312	human	ensembl	74_37	+1	known	missense	c.392	p.S131L	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY4_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPY4R	HGNC	ENSG00000204174				286	0	0	320	48	13.0435
RBP3	0	genome.wustl.edu	37	10	48389221	48389221	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	48389221	48389221	C	T	SNP	RBP3	ENST00000224600	human	ensembl	74_37	-1	known	missense	c.1657	p.A553T	1.000	pfam_Interphotoreceptor_retinol-bd,smart_Interphotoreceptor_retinol-bd	pfam_Interphotoreceptor_retinol-bd,pfam_Interphotorcpt_retinol-bd_N,smart_Interphotoreceptor_retinol-bd	-	no_errors	RBP3	HGNC	ENSG00000107618				86	0	0	68	27	28.4211
GDF2	0	genome.wustl.edu	37	10	48414123	48414123	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	48414123	48414123	T	C	SNP	GDF2	ENST00000249598	human	ensembl	74_37	-1	known	missense	c.745	p.R249G	0.836	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	GDF2	HGNC	ENSG00000128802				101	0	0	92	27	22.6891
VSTM4	0	genome.wustl.edu	37	10	50315742	50315742	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	50315742	50315742	C	T	SNP	VSTM4	ENST00000332853	human	ensembl	74_37	-1	known	silent	c.354	p.Q118	0.077	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM4	HGNC	ENSG00000165633				96	0	0	90	42	31.8182
AKR1C3	0	genome.wustl.edu	37	10	5144398	5144398	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	5144398	5144398	C	T	SNP	AKR1C3	ENST00000380554	human	ensembl	74_37	+1	known	nonsense	c.676	p.R226*	0.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1C3	HGNC	ENSG00000196139				114	0	0	104	37	26.2411
FAM208B	0	genome.wustl.edu	37	10	5799586	5799586	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	5799586	5799586	C	A	SNP	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	missense	c.6836	p.A2279E	0.036	NULL	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021				300	1	0.332226	339	119	25.9825
TFAM	0	genome.wustl.edu	37	10	60154714	60154714	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	60154714	60154714	C	T	SNP	TFAM	ENST00000487519	human	ensembl	74_37	+1	known	silent	c.621	p.D207	0.998	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TFAM	HGNC	ENSG00000108064				38	0	0	48	10	17.2414
PHYHIPL	0	genome.wustl.edu	37	10	60994193	60994193	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	60994193	60994193	G	A	SNP	PHYHIPL	ENST00000373880	human	ensembl	74_37	+1	known	missense	c.236	p.R79H	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	PHYHIPL	HGNC	ENSG00000165443				49	0	0	72	17	19.1011
ANK3	0	genome.wustl.edu	37	10	61831926	61831926	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	61831926	61831926	G	A	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.8713	p.R2905C	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				53	0	0	82	32	28.0702
EGR2	0	genome.wustl.edu	37	10	64573218	64573218	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	64573218	64573218	C	T	SNP	EGR2	ENST00000242480	human	ensembl	74_37	-1	known	missense	c.1180	p.G394S	0.998	pfscan_Znf_C2H2	pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR2	HGNC	ENSG00000122877				234	0	0	245	53	17.7852
EGR2	0	genome.wustl.edu	37	10	64573837	64573837	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	64573837	64573837	C	T	SNP	EGR2	ENST00000242480	human	ensembl	74_37	-1	known	silent	c.561	p.A187	0.031	NULL	pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR2	HGNC	ENSG00000122877				143	0	0	110	39	26.1745
JMJD1C	0	genome.wustl.edu	37	10	64968900	64968900	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	64968900	64968900	T	C	SNP	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	silent	c.2790	p.A930	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988				115	0	0	147	58	28.2927
ATOH7	0	genome.wustl.edu	37	10	69991318	69991318	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	69991318	69991318	C	T	SNP	ATOH7	ENST00000373673	human	ensembl	74_37	-1	known	silent	c.117	p.A39	1.000	superfamily_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ATOH7	HGNC	ENSG00000179774				17	0	0	20	5	20
H2AFY2	0	genome.wustl.edu	37	10	71851564	71851564	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	71851564	71851564	C	T	SNP	H2AFY2	ENST00000373255	human	ensembl	74_37	+1	known	missense	c.331	p.P111S	1.000	superfamily_Histone-fold,smart_Histone_H2A,pirsf_Core_histone_macro-H2A,prints_Histone_H2A	pfam_Macro_dom,pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,smart_Macro_dom,pirsf_Core_histone_macro-H2A,pfscan_Macro_dom,prints_Histone_H2A	-	no_errors	H2AFY2	HGNC	ENSG00000099284				94	0	0	73	15	17.0455
ADAMTS14	0	genome.wustl.edu	37	10	72511870	72511870	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	72511870	72511870	C	T	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	silent	c.2625	p.Y875	0.963	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316				36	0	0	42	16	27.5862
ADAMTS14	0	genome.wustl.edu	37	10	72511949	72511949	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	72511949	72511949	C	T	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	missense	c.2704	p.R902W	0.995	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316				84	0	0	75	19	20.2128
UNC5B	0	genome.wustl.edu	37	10	73047450	73047450	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	73047450	73047450	G	A	SNP	UNC5B	ENST00000335350	human	ensembl	74_37	+1	known	missense	c.829	p.A277T	0.554	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ZU5,pfam_Ig_I-set,pfam_Death_domain,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5B	HGNC	ENSG00000107731				107	0	0	142	8	5.33333
DUPD1	0	genome.wustl.edu	37	10	76803595	76803595	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	76803595	76803595	C	T	SNP	DUPD1	ENST00000338487	human	ensembl	74_37	-1	known	silent	c.381	p.P127	0.002	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP_famA,prints_Atypical_DUSP	-	no_errors	DUPD1	HGNC	ENSG00000188716				124	0	0	119	37	23.7179
MAT1A	0	genome.wustl.edu	37	10	82034359	82034359	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	82034359	82034359	G	T	SNP	MAT1A	ENST00000372213	human	ensembl	74_37	-1	known	silent	c.1002	p.T334	1.000	pfam_S-AdoMet_synt_C,superfamily_S-AdoMet_synthetase_sfam,pirsf_S-AdoMet_synthetase,tigrfam_S-AdoMet_synthetase	pfam_S-AdoMet_synt_C,pfam_S-AdoMet_synt_central,pfam_S-AdoMet_synt_N,superfamily_S-AdoMet_synthetase_sfam,pirsf_S-AdoMet_synthetase,tigrfam_S-AdoMet_synthetase	-	no_errors	MAT1A	HGNC	ENSG00000151224				140	0	0	134	54	28.7234
MMRN2	0	genome.wustl.edu	37	10	88696544	88696544	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	88696544	88696544	G	T	SNP	MMRN2	ENST00000372027	human	ensembl	74_37	-1	known	missense	c.2806	p.L936M	0.005	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_EMI_domain,superfamily_Tumour_necrosis_fac-like_dom,superfamily_tRNA-bd_arm,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	MMRN2	HGNC	ENSG00000173269				326	1	0.30581	297	89	23.057
RNLS	0	genome.wustl.edu	37	10	90122398	90122398	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	90122398	90122398	G	A	SNP	RNLS	ENST00000331772	human	ensembl	74_37	-1	known	missense	c.611	p.T204M	1.000	pfam_Amino_oxidase	pfam_Amino_oxidase	-	no_errors	RNLS	HGNC	ENSG00000184719				45	0	0	102	33	24.4444
PANK1	0	genome.wustl.edu	37	10	91353042	91353042	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	91353042	91353042	G	C	SNP	PANK1	ENST00000307534	human	ensembl	74_37	-1	known	missense	c.1523	p.S508C	0.998	pfam_Type_II_PanK,tigrfam_Type_II_PanK	pfam_Type_II_PanK,tigrfam_Type_II_PanK	-	no_errors	PANK1	HGNC	ENSG00000152782				31	0	0	50	25	33.3333
PPP1R3C	0	genome.wustl.edu	37	10	93390388	93390388	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	93390388	93390388	G	A	SNP	PPP1R3C	ENST00000238994	human	ensembl	74_37	-1	known	missense	c.250	p.R84C	1.000	pirsf_Pase-1_Glycogen_target-su_met	pfam_CBM_21,pirsf_Pase-1_Glycogen_target-su_met,pfscan_CBM_21	-	no_errors	PPP1R3C	HGNC	ENSG00000119938				139	0	0	153	59	27.8302
PDE6C	0	genome.wustl.edu	37	10	95381733	95381733	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	95381733	95381733	T	C	SNP	PDE6C	ENST00000371447	human	ensembl	74_37	+1	known	silent	c.768	p.D256	0.998	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6C	HGNC	ENSG00000095464				100	0	0	141	39	21.6667
BLNK	0	genome.wustl.edu	37	10	97987263	97987263	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	97987263	97987263	G	A	SNP	BLNK	ENST00000224337	human	ensembl	74_37	-1	known	silent	c.264	p.A88	0.005	NULL	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	BLNK	HGNC	ENSG00000095585				153	0	0	154	55	26.3158
AVPI1	0	genome.wustl.edu	37	10	99439596	99439596	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	99439596	99439596	G	A	SNP	AVPI1	ENST00000370626	human	ensembl	74_37	-1	known	missense	c.67	p.R23C	1.000	NULL	NULL	-	no_errors	AVPI1	HGNC	ENSG00000119986				18	0	0	12	2	14.2857
AP2A2	0	genome.wustl.edu	37	11	1009121	1009121	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	1009121	1009121	C	T	SNP	AP2A2	ENST00000332231	human	ensembl	74_37	+1	known	silent	c.2445	p.N815	0.957	pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP2_complex_asu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a-adaptin_app_sub_C,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP2_complex_asu	-	no_errors	AP2A2	HGNC	ENSG00000183020				21	0	0	21	12	36.3636
MUC6	0	genome.wustl.edu	37	11	1016104	1016104	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	1016104	1016104	C	T	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	missense	c.6697	p.V2233M	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				93	0	0	88	27	23.4783
KIAA1377	0	genome.wustl.edu	37	11	101786106	101786106	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	101786106	101786106	C	T	SNP	KIAA1377	ENST00000263468	human	ensembl	74_37	+1	known	missense	c.91	p.R31W	0.002	NULL	NULL	-	no_errors	KIAA1377	HGNC	ENSG00000110318				247	0	0	276	69	20
MUC6	0	genome.wustl.edu	37	11	1025025	1025025	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	1025025	1025025	G	A	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	missense	c.3044	p.T1015M	0.996	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				38	0	0	41	13	24.0741
MUC2	0	genome.wustl.edu	37	11	1090915	1090915	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	1090915	1090915	C	A	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	silent	c.3810	p.T1270	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				24	0	0	25	9	26.4706
PIH1D2	0	genome.wustl.edu	37	11	111941920	111941920	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	111941920	111941920	T	C	SNP	PIH1D2	ENST00000280350	human	ensembl	74_37	-1	known	missense	c.389	p.Q130R	0.003	pfam_PIH	pfam_PIH	-	no_errors	PIH1D2	HGNC	ENSG00000150773				276	0	0	305	86	21.9949
APOA4	0	genome.wustl.edu	37	11	116691981	116691981	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	116691981	116691981	G	A	SNP	APOA4	ENST00000357780	human	ensembl	74_37	-1	known	nonsense	c.793	p.Q265*	0.723	pfam_ApoA1_A4_E	pfam_ApoA1_A4_E	-	no_errors	APOA4	HGNC	ENSG00000110244				109	0	0	124	36	22.5
BACE1	0	genome.wustl.edu	37	11	117186283	117186283	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	117186283	117186283	C	T	SNP	BACE1	ENST00000313005	human	ensembl	74_37	-1	known	missense	c.229	p.V77M	1.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Pept_A1_BACE,prints_Pept_A1_BACE1,prints_Aspartic_peptidase	-	no_errors	BACE1	HGNC	ENSG00000186318				47	0	0	39	7	15.2174
DSCAML1	0	genome.wustl.edu	37	11	117387410	117387410	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	117387410	117387410	C	T	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.1735	p.G579R	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				53	0	0	50	12	19.3548
DSCAML1	0	genome.wustl.edu	37	11	117651423	117651423	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	117651423	117651423	G	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.329	p.A110V	0.875	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				123	0	0	148	42	22.1053
PHLDB1	0	genome.wustl.edu	37	11	118499199	118499199	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	118499199	118499199	C	A	SNP	PHLDB1	ENST00000361417	human	ensembl	74_37	+1	known	missense	c.1660	p.Q554K	0.984	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144				47	0	0	45	7	13.4615
PDZD3	0	genome.wustl.edu	37	11	119058114	119058114	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	119058114	119058114	C	T	SNP	PDZD3	ENST00000392817	human	ensembl	74_37	+1	known	missense	c.664	p.R222W	1.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD3	HGNC	ENSG00000172367				62	0	0	56	14	20
TRIM29	0	genome.wustl.edu	37	11	120008304	120008304	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	120008304	120008304	C	T	SNP	TRIM29	ENST00000341846	human	ensembl	74_37	-1	known	missense	c.436	p.G146R	0.483	NULL	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	-	no_errors	TRIM29	HGNC	ENSG00000137699				214	0	0	232	93	28.6154
ARHGEF12	0	genome.wustl.edu	37	11	120350842	120350842	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	120350842	120350842	C	T	SNP	ARHGEF12	ENST00000356641	human	ensembl	74_37	+1	known	missense	c.3883	p.P1295S	1.000	NULL	pfam_RGS-like_dom,pfam_DH-domain,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_DH-domain,superfamily_PDZ,smart_PDZ,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF12	HGNC	ENSG00000196914				230	0	0	243	72	22.8571
GRIK4	0	genome.wustl.edu	37	11	120827592	120827592	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	120827592	120827592	G	A	SNP	GRIK4	ENST00000527524	human	ensembl	74_37	+1	known	missense	c.1804	p.G602R	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK4	HGNC	ENSG00000149403				110	0	0	87	33	27.5
UBASH3B	0	genome.wustl.edu	37	11	122678801	122678801	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	122678801	122678801	G	A	SNP	UBASH3B	ENST00000284273	human	ensembl	74_37	+1	known	missense	c.1729	p.A577T	1.000	pfam_His_Pase_superF_clade-1	pfam_His_Pase_superF_clade-1,pfam_SH3_domain,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_SH3_domain,superfamily_RNA_ligase/cNuc_Pdiesterase,smart_UBA/transl_elong_EF1B_N_euk,smart_SH3_domain,pfscan_SH3_domain,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBASH3B	HGNC	ENSG00000154127				471	0	0	562	175	23.7449
BSX	0	genome.wustl.edu	37	11	122848490	122848490	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	122848490	122848490	C	T	SNP	BSX	ENST00000343035	human	ensembl	74_37	-1	known	missense	c.569	p.R190H	0.821	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	BSX	HGNC	ENSG00000188909				60	0	0	46	22	32.3529
NRGN	0	genome.wustl.edu	37	11	124615423	124615423	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	124615423	124615423	G	A	SNP	NRGN	ENST00000284292	human	ensembl	74_37	+1	known	missense	c.40	p.D14N	1.000	NULL	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	NRGN	HGNC	ENSG00000154146				89	0	0	62	13	17.3333
VSIG2	0	genome.wustl.edu	37	11	124618378	124618378	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	124618378	124618378	C	T	SNP	VSIG2	ENST00000326621	human	ensembl	74_37	-1	known	silent	c.759	p.V253	0.386	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	VSIG2	HGNC	ENSG00000019102				100	0	0	102	32	23.8806
ROBO3	0	genome.wustl.edu	37	11	124738937	124738937	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	124738937	124738937	G	A	SNP	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	missense	c.400	p.A134T	0.993	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134				12	0	0	14	4	22.2222
NFRKB	0	genome.wustl.edu	37	11	129754773	129754773	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	129754773	129754773	C	T	SNP	NFRKB	ENST00000524794	human	ensembl	74_37	-1	known	silent	c.684	p.T228	1.000	NULL	NULL	-	no_errors	NFRKB	HGNC	ENSG00000170322				49	0	0	41	22	34.9206
NCAPD3	0	genome.wustl.edu	37	11	134051038	134051038	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	134051038	134051038	G	A	SNP	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	silent	c.2493	p.C831	0.992	superfamily_ARM-type_fold,pirsf_NCAPD3	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503				24	0	0	38	13	25.4902
GLB1L2	0	genome.wustl.edu	37	11	134212846	134212846	+	Splice_Site	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	134212846	134212846	G	A	SNP	GLB1L2	ENST00000339772	human	ensembl	74_37	+1	known	splice_site	c.284+1	e2+1	1.000	-	-	-	no_errors	GLB1L2	HGNC	ENSG00000149328				97	0	0	65	32	32.9897
CALCA	0	genome.wustl.edu	37	11	14991505	14991505	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	14991505	14991505	T	A	SNP	CALCA	ENST00000331587	human	ensembl	74_37	-1	known	missense	c.203	p.Q68L	0.999	pfam_Procalcitonin/adrenomedullin	pfam_Procalcitonin/adrenomedullin,smart_Calcitonin_peptide-like,prints_Calcitonin	-	no_errors	CALCA	HGNC	ENSG00000110680				138	0	0	132	46	25.8427
SOX6	0	genome.wustl.edu	37	11	16071413	16071413	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	16071413	16071413	C	T	SNP	SOX6	ENST00000352083	human	ensembl	74_37	-1	known	silent	c.1323	p.T441	0.908	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX6	HGNC	ENSG00000110693				130	0	0	413	109	20.8812
LDHC	0	genome.wustl.edu	37	11	18436832	18436832	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	18436832	18436832	G	T	SNP	LDHC	ENST00000280704	human	ensembl	74_37	+1	known	missense	c.228	p.K76N	1.000	pfam_Lactate/malate_DH_N,pirsf_L-lactate/malate_DH,tigrfam_L-lactate_DH	pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,prints_L-lactate/malate_DH,tigrfam_L-lactate_DH	-	no_errors	LDHC	HGNC	ENSG00000166796				78	0	0	82	21	20.3883
TNNI2	0	genome.wustl.edu	37	11	1862321	1862321	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	1862321	1862321	C	T	SNP	TNNI2	ENST00000252898	human	ensembl	74_37	+1	known	missense	c.337	p.R113W	0.949	pfam_Troponin	pfam_Troponin	-	no_errors	TNNI2	HGNC	ENSG00000130598				31	0	0	43	11	20.3704
RIC8A	0	genome.wustl.edu	37	11	214277	214277	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	214277	214277	C	T	SNP	RIC8A	ENST00000325207	human	ensembl	74_37	+1	known	missense	c.1541	p.T514M	0.817	NULL	pfam_Gua_nucleotide_exch_fac_Ric8,superfamily_ARM-type_fold,prints_Synembryn	-	no_errors	RIC8A	HGNC	ENSG00000177963				20	0	0	21	6	22.2222
CD81	0	genome.wustl.edu	37	11	2415337	2415337	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	2415337	2415337	T	G	SNP	CD81	ENST00000263645	human	ensembl	74_37	+1	known	missense	c.194	p.L65R	1.000	pfam_Tetraspanin/Peripherin,prints_Tetraspanin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	CD81	HGNC	ENSG00000110651				93	0	0	77	25	24.5098
LIN7C	0	genome.wustl.edu	37	11	27520241	27520241	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	27520241	27520241	C	T	SNP	LIN7C	ENST00000278193	human	ensembl	74_37	-1	known	silent	c.549	p.S183	0.005	superfamily_PDZ,pirsf_Lin-7_homologue	pfam_PDZ,pfam_L27_C,superfamily_PDZ,smart_L27,smart_PDZ,pirsf_Lin-7_homologue,pfscan_L27,pfscan_PDZ	-	no_errors	LIN7C	HGNC	ENSG00000148943				184	0	0	217	57	20.8029
KCNQ1	0	genome.wustl.edu	37	11	2798261	2798261	+	Silent	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	2798261	2798261	A	C	SNP	KCNQ1	ENST00000155840	human	ensembl	74_37	+1	known	silent	c.1731	p.S577	1.000	pfam_K_chnl_volt-dep_KCNQ_C,prints_K_chnl_volt-dep_KCQN1	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCQN1,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ1	HGNC	ENSG00000053918				49	0	0	33	13	28.2609
DCDC1	0	genome.wustl.edu	37	11	31086113	31086113	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	31086113	31086113	G	T	SNP	DCDC1	ENST00000597505	human	ensembl	74_37	-1	putative	missense	c.2494	p.H832N	0.542	NULL	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Doublecortin_dom,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959				76	0	0	193	61	24.0157
ELP4	0	genome.wustl.edu	37	11	31625347	31625347	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	31625347	31625347	C	T	SNP	ELP4	ENST00000395934	human	ensembl	74_37	+1	known	silent	c.546	p.H182	1.000	pfam_Elongator_complex_protein_4	pfam_Elongator_complex_protein_4,superfamily_P-loop_NTPase	-	no_errors	ELP4	HGNC	ENSG00000109911				61	0	0	105	28	21.0526
MRGPRE	0	genome.wustl.edu	37	11	3249839	3249839	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	3249839	3249839	T	C	SNP	MRGPRE	ENST00000389832	human	ensembl	74_37	-1	known	missense	c.191	p.D64G	0.991	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRE	HGNC	ENSG00000184350				147	0	0	141	38	21.2291
PKP3	0	genome.wustl.edu	37	11	400008	400008	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	400008	400008	C	T	SNP	PKP3	ENST00000331563	human	ensembl	74_37	+1	known	missense	c.1315	p.R439C	1.000	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP3	HGNC	ENSG00000184363				27	0	0	21	3	12.5
CHRM4	0	genome.wustl.edu	37	11	46407572	46407572	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	46407572	46407572	G	A	SNP	CHRM4	ENST00000433765	human	ensembl	74_37	-1	known	missense	c.536	p.T179M	0.970	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn,prints_Musac_Ach_M4_rcpt	-	no_errors	CHRM4	HGNC	ENSG00000180720				21	0	0	20	12	37.5
MTCH2	0	genome.wustl.edu	37	11	47640459	47640459	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	47640459	47640459	G	A	SNP	MTCH2	ENST00000302503	human	ensembl	74_37	-1	known	nonsense	c.838	p.R280*	1.000	NULL	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	MTCH2	HGNC	ENSG00000109919				107	0	0	128	38	22.8916
AGBL2	0	genome.wustl.edu	37	11	47732033	47732033	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	47732033	47732033	G	A	SNP	AGBL2	ENST00000357610	human	ensembl	74_37	-1	known	missense	c.128	p.T43M	0.062	NULL	pfam_Peptidase_M14	-	no_errors	AGBL2	HGNC	ENSG00000165923				147	0	0	159	32	16.7539
OR4X1	0	genome.wustl.edu	37	11	48286188	48286188	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	48286188	48286188	C	A	SNP	OR4X1	ENST00000320048	human	ensembl	74_37	+1	known	missense	c.776	p.P259H	0.986	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4X1	HGNC	ENSG00000176567				115	1	0.862069	246	54	18
OR51I1	0	genome.wustl.edu	37	11	5461995	5461995	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	5461995	5461995	C	T	SNP	OR51I1	ENST00000380211	human	ensembl	74_37	-1	known	silent	c.750	p.V250	0.003	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51I1	HGNC	ENSG00000167359				29	0	0	65	21	24.4186
TRIM48	0	genome.wustl.edu	37	11	55035844	55035844	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	55035844	55035844	T	C	SNP	TRIM48	ENST00000417545	human	ensembl	74_37	+1	known	missense	c.574	p.Y192H	0.183	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM48	HGNC	ENSG00000150244				32	0	0	108	11	9.2437
OR5R1	0	genome.wustl.edu	37	11	56184864	56184864	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	56184864	56184864	A	G	SNP	OR5R1	ENST00000312253	human	ensembl	74_37	-1	known	missense	c.845	p.I282T	0.978	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5R1	HGNC	ENSG00000174942				104	0	0	162	63	28
TNKS1BP1	0	genome.wustl.edu	37	11	57088081	57088081	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	57088081	57088081	G	T	SNP	TNKS1BP1	ENST00000358252	human	ensembl	74_37	-1	known	missense	c.200	p.P67H	0.868	NULL	NULL	-	no_errors	TNKS1BP1	HGNC	ENSG00000149115				46	0	0	44	18	29.0323
SLC43A1	0	genome.wustl.edu	37	11	57263584	57263584	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	57263584	57263584	G	A	SNP	SLC43A1	ENST00000278426	human	ensembl	74_37	-1	known	silent	c.612	p.G204	0.999	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC43A1	HGNC	ENSG00000149150				46	0	0	64	22	25.5814
ZDHHC5	0	genome.wustl.edu	37	11	57460087	57460087	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	57460087	57460087	C	T	SNP	ZDHHC5	ENST00000287169	human	ensembl	74_37	+1	known	missense	c.665	p.T222M	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC5	HGNC	ENSG00000156599				50	0	0	61	21	25.6098
OR10Q1	0	genome.wustl.edu	37	11	57995632	57995632	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	57995632	57995632	C	T	SNP	OR10Q1	ENST00000316770	human	ensembl	74_37	-1	known	missense	c.716	p.R239H	0.990	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Q1	HGNC	ENSG00000180475				65	0	0	85	22	20.5607
OR10Q1	0	genome.wustl.edu	37	11	57996170	57996170	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	57996170	57996170	G	A	SNP	OR10Q1	ENST00000316770	human	ensembl	74_37	-1	known	missense	c.178	p.R60C	0.046	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Q1	HGNC	ENSG00000180475				107	0	0	118	39	24.8408
OR52E8	0	genome.wustl.edu	37	11	5878912	5878912	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	5878912	5878912	C	T	SNP	OR52E8	ENST00000537935	human	ensembl	74_37	-1	known	silent	c.21	p.T7	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52E8	HGNC	ENSG00000183269				20	0	0	109	29	21.0145
ASRGL1	0	genome.wustl.edu	37	11	62156702	62156702	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	62156702	62156702	G	A	SNP	ASRGL1	ENST00000301776	human	ensembl	74_37	+1	known	missense	c.589	p.V197I	0.997	pfam_Peptidase_T2	pfam_Peptidase_T2	-	no_errors	ASRGL1	HGNC	ENSG00000162174				115	0	0	131	34	20.6061
AHNAK	0	genome.wustl.edu	37	11	62284598	62284598	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	62284598	62284598	G	A	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	missense	c.17291	p.P5764L	0.906	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942				90	0	0	116	51	30.5389
SNHG1	0	genome.wustl.edu	37	11	62622615	62622615	+	RNA	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	62622615	62622615	A	G	SNP	SNHG1	ENST00000537068	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG1	HGNC	ENSG00000255717				67	0	0	81	30	27.027
ATL3	0	genome.wustl.edu	37	11	63414021	63414021	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	63414021	63414021	G	A	SNP	ATL3	ENST00000332645	human	ensembl	74_37	-1	known	silent	c.657	p.Y219	1.000	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	ATL3	HGNC	ENSG00000184743				71	0	0	79	15	15.9574
C11orf84	0	genome.wustl.edu	37	11	63585406	63585406	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	63585406	63585406	G	A	SNP	C11orf84	ENST00000294244	human	ensembl	74_37	+1	known	missense	c.257	p.S86N	0.998	NULL	NULL	-	no_errors	C11orf84	HGNC	ENSG00000168005				36	0	0	43	19	30.6452
NRXN2	0	genome.wustl.edu	37	11	64434840	64434840	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	64434840	64434840	G	A	SNP	NRXN2	ENST00000265459	human	ensembl	74_37	-1	known	silent	c.1680	p.D560	0.180	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076				177	0	0	182	49	21.2121
PPP2R5B	0	genome.wustl.edu	37	11	64697985	64697985	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	64697985	64697985	C	T	SNP	PPP2R5B	ENST00000164133	human	ensembl	74_37	+1	known	missense	c.815	p.T272M	0.992	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5B	HGNC	ENSG00000068971				119	0	0	117	29	19.863
TRIM3	0	genome.wustl.edu	37	11	6477697	6477697	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	6477697	6477697	C	T	SNP	TRIM3	ENST00000345851	human	ensembl	74_37	-1	known	missense	c.1259	p.R420H	0.925	superfamily_Ig_E-set,smart_Filamin	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM3	HGNC	ENSG00000110171				32	0	0	34	17	33.3333
SLC25A45	0	genome.wustl.edu	37	11	65144509	65144509	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	65144509	65144509	C	A	SNP	SLC25A45	ENST00000398802	human	ensembl	74_37	-1	known	silent	c.378	p.R126	0.930	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A45	HGNC	ENSG00000162241				66	0	0	55	17	23.6111
MAP3K11	0	genome.wustl.edu	37	11	65365885	65365885	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	65365885	65365885	C	T	SNP	MAP3K11	ENST00000309100	human	ensembl	74_37	-1	known	silent	c.2421	p.P807	0.397	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K11	HGNC	ENSG00000173327				63	0	0	54	23	29.8701
PCNXL3	0	genome.wustl.edu	37	11	65390989	65390989	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	65390989	65390989	C	T	SNP	PCNXL3	ENST00000355703	human	ensembl	74_37	+1	known	silent	c.2385	p.F795	0.718	NULL	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136				41	0	0	58	18	23.6842
CTSF	0	genome.wustl.edu	37	11	66331420	66331420	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	66331420	66331420	G	A	SNP	CTSF	ENST00000310325	human	ensembl	74_37	-1	known	missense	c.1439	p.S480L	0.992	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSF	HGNC	ENSG00000174080				53	0	0	35	26	42.623
RBM14	0	genome.wustl.edu	37	11	66392099	66392099	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	66392099	66392099	C	T	SNP	RBM14	ENST00000310137	human	ensembl	74_37	+1	known	missense	c.752	p.A251V	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM14	HGNC	ENSG00000239306				120	0	0	167	21	11.1702
ANKRD13D	0	genome.wustl.edu	37	11	67068991	67068991	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	67068991	67068991	G	A	SNP	ANKRD13D	ENST00000511455	human	ensembl	74_37	+1	known	missense	c.1381	p.V461M	0.998	pfam_ANKRD13	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ubiquitin-int_motif,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif	-	no_errors	ANKRD13D	HGNC	ENSG00000172932				92	0	0	86	20	18.8679
PITPNM1	0	genome.wustl.edu	37	11	67267162	67267162	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	67267162	67267162	C	T	SNP	PITPNM1	ENST00000525521	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.077	-	-	-	no_errors	PITPNM1	HGNC	ENSG00000110697				45	0	0	34	18	34.6154
NDUFV1	0	genome.wustl.edu	37	11	67379380	67379380	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	67379380	67379380	A	G	SNP	NDUFV1	ENST00000322776	human	ensembl	74_37	+1	known	missense	c.1093	p.K365E	1.000	pfam_NADH-UbQ_OxRdtase_Fsu_4Fe4S-bd,smart_NADH-UbQ_OxRdtase_Fsu_4Fe4S-bd,tigrfam_NADH-UbQ_OxRdtase_suF	pfam_NADH_UbQ_OxRdtase_51kDa_su,pfam_NADH-UbQ_OxRdtase_Fsu_4Fe4S-bd,pfam_Soluble_ligand-bd,smart_NADH-UbQ_OxRdtase_Fsu_4Fe4S-bd,tigrfam_NADH-UbQ_OxRdtase_suF	-	no_errors	NDUFV1	HGNC	ENSG00000167792				80	0	0	65	20	23.5294
ANO1	0	genome.wustl.edu	37	11	70009435	70009435	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	70009435	70009435	C	T	SNP	ANO1	ENST00000355303	human	ensembl	74_37	+1	known	nonsense	c.1939	p.R647*	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO1	HGNC	ENSG00000131620				47	0	0	29	8	21.6216
INPPL1	0	genome.wustl.edu	37	11	71939254	71939254	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	71939254	71939254	C	T	SNP	INPPL1	ENST00000298229	human	ensembl	74_37	+1	known	missense	c.203	p.T68M	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_Endo/exonuclease/phosphatase,pfam_SH2,pfam_SAM_2,pfam_SAM_type1,superfamily_Endo/exonuclease/phosphatase,superfamily_SAM/pointed,smart_SH2,smart_IPPc,smart_SAM,pfscan_SAM,pfscan_SH2,prints_SH2	-	no_errors	INPPL1	HGNC	ENSG00000165458				118	0	0	111	36	24.4898
PDE2A	0	genome.wustl.edu	37	11	72295930	72295930	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	72295930	72295930	C	T	SNP	PDE2A	ENST00000334456	human	ensembl	74_37	-1	known	missense	c.1345	p.V449M	1.000	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE2A	HGNC	ENSG00000186642				115	0	0	93	37	28.4615
CHRDL2	0	genome.wustl.edu	37	11	74441890	74441890	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	74441890	74441890	G	A	SNP	CHRDL2	ENST00000263671	human	ensembl	74_37	-1	known	missense	c.44	p.A15V	1.000	NULL	pfam_VWF_C,smart_VWF_C,pfscan_VWF_C	-	no_errors	CHRDL2	HGNC	ENSG00000054938				21	0	0	25	3	10.7143
MAP6	0	genome.wustl.edu	37	11	75379314	75379314	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	75379314	75379314	G	A	SNP	MAP6	ENST00000304771	human	ensembl	74_37	-1	known	missense	c.101	p.S34L	1.000	pfam_MAP6/FAM154	pfam_MAP6/FAM154	-	no_errors	MAP6	HGNC	ENSG00000171533				37	0	0	31	9	22.5
GDPD4	0	genome.wustl.edu	37	11	76996214	76996214	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	76996214	76996214	G	A	SNP	GDPD4	ENST00000527489	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GDPD4	HGNC	ENSG00000178795				45	0	0	38	16	29.6296
USP35	0	genome.wustl.edu	37	11	77921181	77921181	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	77921181	77921181	C	T	SNP	USP35	ENST00000529308	human	ensembl	74_37	+1	known	silent	c.2280	p.S760	0.003	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP35	HGNC	ENSG00000118369				80	0	0	101	32	24.0602
CEND1	0	genome.wustl.edu	37	11	788202	788202	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	788202	788202	C	T	SNP	CEND1	ENST00000330106	human	ensembl	74_37	-1	known	silent	c.375	p.L125	0.999	NULL	NULL	-	no_errors	CEND1	HGNC	ENSG00000184524				20	0	0	17	7	29.1667
LMO1	0	genome.wustl.edu	37	11	8248584	8248584	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	8248584	8248584	C	T	SNP	LMO1	ENST00000335790	human	ensembl	74_37	-1	known	silent	c.303	p.V101	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LMO1	HGNC	ENSG00000166407				56	0	0	46	22	32.3529
PCF11	0	genome.wustl.edu	37	11	82877374	82877374	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	82877374	82877374	C	T	SNP	PCF11	ENST00000298281	human	ensembl	74_37	+1	known	nonsense	c.1435	p.R479*	1.000	NULL	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,smart_CID_dom	-	no_errors	PCF11	HGNC	ENSG00000165494				31	0	0	39	19	32.7586
DLG2	0	genome.wustl.edu	37	11	83770433	83770433	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	83770433	83770433	C	T	SNP	DLG2	ENST00000376104	human	ensembl	74_37	-1	known	missense	c.844	p.V282I	0.999	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ	pfam_PDZ,pfam_GK/Ca_channel_bsu,pfam_MAGUK_PEST_N,pfam_PDZ_assoc,pfam_L27_1,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG2	HGNC	ENSG00000150672				46	0	0	98	51	34.2282
GRM5	0	genome.wustl.edu	37	11	88780735	88780735	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	88780735	88780735	C	T	SNP	GRM5	ENST00000305447	human	ensembl	74_37	-1	known	silent	c.306	p.S102	0.001	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_5,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_1,pfscan_GPCR_3_C	-	no_errors	GRM5	HGNC	ENSG00000168959				41	0	0	47	19	28.7879
FAT3	0	genome.wustl.edu	37	11	92533495	92533495	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	92533495	92533495	G	A	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.7316	p.R2439Q	0.994	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				48	0	0	101	30	22.9008
CCDC82	0	genome.wustl.edu	37	11	96117864	96117864	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	96117864	96117864	G	A	SNP	CCDC82	ENST00000278520	human	ensembl	74_37	-1	known	silent	c.48	p.H16	0.617	NULL	NULL	-	no_errors	CCDC82	HGNC	ENSG00000149231				55	0	0	60	23	27.7108
SWAP70	0	genome.wustl.edu	37	11	9746422	9746422	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	9746422	9746422	T	C	SNP	SWAP70	ENST00000318950	human	ensembl	74_37	+1	known	missense	c.632	p.V211A	0.997	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_EF_hand_dom,pfscan_Pleckstrin_homology	-	no_errors	SWAP70	HGNC	ENSG00000133789				95	0	0	104	41	28.2759
ARL1	0	genome.wustl.edu	37	12	101801503	101801503	+	RNA	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	101801503	101801503	A	C	SNP	ARL1	ENST00000549283	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARL1	HGNC	ENSG00000120805				122	1	0.813008	132	57	30.1587
RAD52	0	genome.wustl.edu	37	12	1025667	1025667	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	1025667	1025667	G	A	SNP	RAD52	ENST00000536177	human	ensembl	74_37	-1	novel	missense	c.760	p.R254C	0.000	NULL	pfam_Rad52_Rad22,tigrfam_DNA_recomb/repair_Rad52	-	no_errors	RAD52	HGNC	ENSG00000002016				20	0	0	18	11	37.931
TXNRD1	0	genome.wustl.edu	37	12	104705167	104705167	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	104705167	104705167	T	C	SNP	TXNRD1	ENST00000429002	human	ensembl	74_37	+1	known	missense	c.514	p.S172P	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_FAD_bind_dom,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Pyridine_nuc-diS_OxRdtase_2,tigrfam_Thioredoxin/glutathione_Rdtase	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_nucl-diS_OxRdtase_dimer,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_FAD_bind_dom,pfam_Glutaredoxin,superfamily_FAD/NAD-linked_Rdtase_dimer,superfamily_Thioredoxin-like_fold,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Hg_reductase,prints_Pyridine_nuc-diS_OxRdtase_2,tigrfam_Thioredoxin/glutathione_Rdtase	-	no_errors	TXNRD1	HGNC	ENSG00000198431				39	0	0	34	9	20.9302
ALDH1L2	0	genome.wustl.edu	37	12	105464436	105464436	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	105464436	105464436	T	C	SNP	ALDH1L2	ENST00000258494	human	ensembl	74_37	-1	known	missense	c.340	p.M114V	1.000	pfam_Formyl_transf_N,superfamily_Formyl_transf_N,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L2	HGNC	ENSG00000136010				87	0	0	95	37	28.0303
CKAP4	0	genome.wustl.edu	37	12	106633328	106633328	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	106633328	106633328	G	A	SNP	CKAP4	ENST00000378026	human	ensembl	74_37	-1	known	missense	c.1283	p.A428V	0.000	superfamily_Tscrpt_elong_fac_GreA/B_N	superfamily_Tscrpt_elong_fac_GreA/B_N,superfamily_STAT_TF_coiled-coil	-	no_errors	CKAP4	HGNC	ENSG00000136026				114	0	0	94	38	28.7879
CKAP4	0	genome.wustl.edu	37	12	106633635	106633635	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	106633635	106633635	G	A	SNP	CKAP4	ENST00000378026	human	ensembl	74_37	-1	known	missense	c.976	p.R326C	1.000	NULL	superfamily_Tscrpt_elong_fac_GreA/B_N,superfamily_STAT_TF_coiled-coil	-	no_errors	CKAP4	HGNC	ENSG00000136026				62	0	0	62	23	27.0588
TAS2R9	0	genome.wustl.edu	37	12	10962116	10962116	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	10962116	10962116	C	G	SNP	TAS2R9	ENST00000240691	human	ensembl	74_37	-1	known	missense	c.559	p.V187L	0.001	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	TAS2R9	HGNC	ENSG00000121381				26	0	0	98	24	19.6721
MYO1H	0	genome.wustl.edu	37	12	109876365	109876365	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	109876365	109876365	G	A	SNP	MYO1H	ENST00000431443	human	ensembl	74_37	+1	known	missense	c.2216	p.R739H	1.000	superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYO1H	HGNC	ENSG00000174527				29	0	0	31	14	31.1111
PRH2	0	genome.wustl.edu	37	12	11083297	11083297	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	11083297	11083297	G	A	SNP	PRH2	ENST00000381847	human	ensembl	74_37	+1	known	missense	c.137	p.R46H	0.000	NULL	NULL	-	no_errors	PRH2	HGNC	ENSG00000134551				143	0	0	165	28	14.5078
CUX2	0	genome.wustl.edu	37	12	111779614	111779614	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	111779614	111779614	G	A	SNP	CUX2	ENST00000261726	human	ensembl	74_37	+1	known	missense	c.3416	p.S1139N	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_Prefoldin,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX2	HGNC	ENSG00000111249				198	0	0	162	47	22.488
BRAP	0	genome.wustl.edu	37	12	112121078	112121078	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	112121078	112121078	G	A	SNP	BRAP	ENST00000419234	human	ensembl	74_37	-1	known	missense	c.116	p.T39M	1.000	NULL	pfam_BRAP2,pfam_Znf_UBP,pfam_Znf_C3HC4_RING-type,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_UBP,pfscan_Znf_RING,pfscan_Znf_UBP	-	no_errors	BRAP	HGNC	ENSG00000089234				244	0	0	217	84	27.907
ACAD10	0	genome.wustl.edu	37	12	112182668	112182668	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	112182668	112182668	C	T	SNP	ACAD10	ENST00000455480	human	ensembl	74_37	+1	known	missense	c.2029	p.H677Y	0.001	superfamily_AcylCoA_DH/oxidase_NM_dom	pfam_Aminoglycoside_PTrfase,pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_DH_2_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_HAD-like_dom,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_Kinase-like_dom,superfamily_AcylCo_DH/oxidase_C,superfamily_HAD-like_dom,prints_HAD-SF_hydro_IA,tigrfam_HAD-SF_ppase_IA/epoxid_hydro_N,tigrfam_HAD-SF_hydro_IA	-	no_errors	ACAD10	HGNC	ENSG00000111271				80	0	0	79	24	23.301
ALDH2	0	genome.wustl.edu	37	12	112221101	112221101	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	112221101	112221101	C	T	SNP	ALDH2	ENST00000261733	human	ensembl	74_37	+1	known	missense	c.359	p.A120V	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH2	HGNC	ENSG00000111275				86	0	0	109	23	17.4242
IQCD	0	genome.wustl.edu	37	12	113633445	113633445	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	113633445	113633445	C	A	SNP	IQCD	ENST00000416617	human	ensembl	74_37	-1	known	missense	c.1285	p.G429C	0.986	pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCD	HGNC	ENSG00000166578				177	0	0	218	13	5.62771
PLBD2	0	genome.wustl.edu	37	12	113821994	113821994	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	113821994	113821994	C	T	SNP	PLBD2	ENST00000280800	human	ensembl	74_37	+1	known	missense	c.1042	p.R348C	0.993	pfam_PLipase_B-like	pfam_PLipase_B-like	-	no_errors	PLBD2	HGNC	ENSG00000151176				58	0	0	56	16	22.2222
TAOK3	0	genome.wustl.edu	37	12	118636867	118636867	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	118636867	118636867	C	T	SNP	TAOK3	ENST00000392533	human	ensembl	74_37	-1	known	missense	c.1183	p.V395M	0.644	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK3	HGNC	ENSG00000135090				138	0	0	125	27	17.7632
SUDS3	0	genome.wustl.edu	37	12	118852224	118852224	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	118852224	118852224	C	T	SNP	SUDS3	ENST00000397564	human	ensembl	74_37	+1	known	missense	c.976	p.R326C	1.000	NULL	pfam_Sds3	-	no_errors	SUDS3	HGNC	ENSG00000111707				11	0	0	12	7	36.8421
CIT	0	genome.wustl.edu	37	12	120128233	120128233	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	120128233	120128233	G	A	SNP	CIT	ENST00000261833	human	ensembl	74_37	-1	known	missense	c.5783	p.T1928M	0.935	pirsf_Citron_Rho-interacting_kinase	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pirsf_Citron_Rho-interacting_kinase,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CIT	HGNC	ENSG00000122966				23	0	0	21	11	34.375
GCN1L1	0	genome.wustl.edu	37	12	120591043	120591043	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	120591043	120591043	C	T	SNP	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	missense	c.4036	p.A1346T	0.974	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154				76	0	0	69	17	19.7674
CCDC62	0	genome.wustl.edu	37	12	123286259	123286259	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	123286259	123286259	A	G	SNP	CCDC62	ENST00000253079	human	ensembl	74_37	+1	known	missense	c.1566	p.I522M	0.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC62	HGNC	ENSG00000130783				218	0	0	240	83	25.6966
C12orf65	0	genome.wustl.edu	37	12	123741554	123741554	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	123741554	123741554	G	T	SNP	C12orf65	ENST00000253233	human	ensembl	74_37	+1	known	missense	c.477	p.W159C	0.852	NULL	pfam_Pep_chain_release_fac_I_II	-	no_errors	C12orf65	HGNC	ENSG00000130921				57	0	0	38	11	22.449
DDX55	0	genome.wustl.edu	37	12	124102324	124102324	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	124102324	124102324	G	A	SNP	DDX55	ENST00000238146	human	ensembl	74_37	+1	known	missense	c.1069	p.G357S	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX55	HGNC	ENSG00000111364				131	0	0	123	27	18
NCOR2	0	genome.wustl.edu	37	12	124812140	124812140	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	124812140	124812140	G	A	SNP	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	missense	c.7019	p.A2340V	0.998	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498				26	0	0	42	8	16
SCARB1	0	genome.wustl.edu	37	12	125292364	125292364	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	125292364	125292364	C	T	SNP	SCARB1	ENST00000415380	human	ensembl	74_37	-1	known	missense	c.952	p.E318K	1.000	pfam_CD36	pfam_CD36,prints_CD36,prints_CD36_antigen	-	no_errors	SCARB1	HGNC	ENSG00000073060				90	0	0	68	28	29.1667
BRI3BP	0	genome.wustl.edu	37	12	125509930	125509930	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	125509930	125509930	G	A	SNP	BRI3BP	ENST00000341446	human	ensembl	74_37	+1	known	missense	c.710	p.R237H	1.000	NULL	NULL	-	no_errors	BRI3BP	HGNC	ENSG00000184992				28	0	0	27	7	20.5882
TMEM132B	0	genome.wustl.edu	37	12	126137090	126137090	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	126137090	126137090	T	C	SNP	TMEM132B	ENST00000299308	human	ensembl	74_37	+1	known	missense	c.2003	p.M668T	0.963	NULL	NULL	-	no_errors	TMEM132B	HGNC	ENSG00000139364				80	0	0	84	24	22.2222
GLT1D1	0	genome.wustl.edu	37	12	129383782	129383782	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	129383782	129383782	T	G	SNP	GLT1D1	ENST00000442111	human	ensembl	74_37	+1	known	missense	c.325	p.F109V	0.929	NULL	pfam_Glyco_trans_1	-	no_errors	GLT1D1	HGNC	ENSG00000151948				180	0	0	160	48	23.0769
TMEM132D	0	genome.wustl.edu	37	12	130184752	130184752	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	130184752	130184752	G	A	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	silent	c.571	p.L191	1.000	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952				40	0	0	45	16	26.2295
GPR133	0	genome.wustl.edu	37	12	131569208	131569208	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	131569208	131569208	G	T	SNP	GPR133	ENST00000261654	human	ensembl	74_37	+1	known	missense	c.1671	p.E557D	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR133	HGNC	ENSG00000111452				49	0	0	66	4	5.71429
ULK1	0	genome.wustl.edu	37	12	132394519	132394519	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	132394519	132394519	C	T	SNP	ULK1	ENST00000321867	human	ensembl	74_37	+1	known	missense	c.781	p.R261C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ser/Thr_kinase_C,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK1	HGNC	ENSG00000177169				37	0	0	54	11	16.9231
P2RX2	0	genome.wustl.edu	37	12	133195509	133195509	+	Splice_Site	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	133195509	133195509	T	C	SNP	P2RX2	ENST00000352418	human	ensembl	74_37	+1	known	splice_site	c.105+2	e1+2	1.000	-	-	-	no_errors	P2RX2	HGNC	ENSG00000187848				42	0	0	39	14	26.4151
POLE	0	genome.wustl.edu	37	12	133257271	133257271	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	133257271	133257271	G	A	SNP	POLE	ENST00000320574	human	ensembl	74_37	-1	known	silent	c.207	p.T69	0.055	superfamily_RNaseH-like_dom	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084				107	0	0	94	29	23.5772
WBP11	0	genome.wustl.edu	37	12	14940008	14940008	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	14940008	14940008	C	A	SNP	WBP11	ENST00000261167	human	ensembl	74_37	-1	known	silent	c.1917	p.G639	0.997	NULL	pfam_WW_dom-bd_prot_11	-	no_errors	WBP11	HGNC	ENSG00000084463				50	0	0	53	11	17.1875
TMTC1	0	genome.wustl.edu	37	12	29904657	29904657	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	29904657	29904657	G	A	SNP	TMTC1	ENST00000256062	human	ensembl	74_37	-1	known	missense	c.556	p.P186S	0.139	NULL	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687				69	0	0	70	29	29.2929
PARP11	0	genome.wustl.edu	37	12	3939057	3939057	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	3939057	3939057	T	C	SNP	PARP11	ENST00000228820	human	ensembl	74_37	-1	known	missense	c.146	p.Q49R	1.000	pfam_WWE-dom,pfscan_WWE-dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_WWE-dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP11	HGNC	ENSG00000111224				92	0	0	95	21	18.1034
SCAF11	0	genome.wustl.edu	37	12	46322094	46322094	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	46322094	46322094	A	G	SNP	SCAF11	ENST00000369367	human	ensembl	74_37	-1	known	missense	c.1390	p.Y464H	0.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	SCAF11	HGNC	ENSG00000139218				84	0	0	116	40	25.641
HDAC7	0	genome.wustl.edu	37	12	48192418	48192418	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	48192418	48192418	C	T	SNP	HDAC7	ENST00000425451	human	ensembl	74_37	-1	known	missense	c.37	p.D13N	0.028	NULL	NULL	-	no_errors	HDAC7	HGNC	ENSG00000061273				41	0	0	43	9	17.3077
DDX23	0	genome.wustl.edu	37	12	49237796	49237796	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	49237796	49237796	G	A	SNP	DDX23	ENST00000308025	human	ensembl	74_37	-1	known	missense	c.247	p.R83W	0.756	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX23	HGNC	ENSG00000174243				415	1	0.240385	363	119	24.6888
CSRNP2	0	genome.wustl.edu	37	12	51458168	51458168	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	51458168	51458168	C	A	SNP	CSRNP2	ENST00000228515	human	ensembl	74_37	-1	known	missense	c.993	p.E331D	1.000	NULL	prints_Cys/Ser-rich_nuc_prot	-	no_errors	CSRNP2	HGNC	ENSG00000110925				167	0	0	168	59	25.9912
KRT5	0	genome.wustl.edu	37	12	52913894	52913894	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	52913894	52913894	G	A	SNP	KRT5	ENST00000252242	human	ensembl	74_37	-1	known	missense	c.187	p.R63W	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT5	HGNC	ENSG00000186081				86	0	0	89	21	19.0909
TARBP2	0	genome.wustl.edu	37	12	53899445	53899445	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	53899445	53899445	C	T	SNP	TARBP2	ENST00000266987	human	ensembl	74_37	+1	known	missense	c.754	p.R252C	1.000	NULL	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	TARBP2	HGNC	ENSG00000139546				316	0	0	335	93	21.729
HOXC9	0	genome.wustl.edu	37	12	54396222	54396222	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	54396222	54396222	G	A	SNP	HOXC9	ENST00000303450	human	ensembl	74_37	+1	known	missense	c.547	p.V183M	1.000	superfamily_Homeodomain-like,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXC9	HGNC	ENSG00000180806				161	0	0	155	49	24.0196
NCKAP1L	0	genome.wustl.edu	37	12	54925281	54925281	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	54925281	54925281	G	C	SNP	NCKAP1L	ENST00000293373	human	ensembl	74_37	+1	known	missense	c.2611	p.V871L	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1,superfamily_Nucl_hormone_rcpt_ligand-bd	-	no_errors	NCKAP1L	HGNC	ENSG00000123338				144	0	0	218	78	26.3514
OR6C1	0	genome.wustl.edu	37	12	55714547	55714547	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	55714547	55714547	C	T	SNP	OR6C1	ENST00000379668	human	ensembl	74_37	+1	known	missense	c.164	p.T55I	0.927	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C1	HGNC	ENSG00000205330				39	0	0	99	22	18.1818
SMARCC2	0	genome.wustl.edu	37	12	56575376	56575376	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	56575376	56575376	G	A	SNP	SMARCC2	ENST00000267064	human	ensembl	74_37	-1	known	silent	c.846	p.N282	1.000	superfamily_Chromodomain-like	pfam_SWIRM,pfam_SANT/Myb,superfamily_Homeodomain-like,superfamily_BRCT_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_SANT/Myb,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	SMARCC2	HGNC	ENSG00000139613				174	0	0	174	43	19.8157
TIMELESS	0	genome.wustl.edu	37	12	56814799	56814799	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	56814799	56814799	C	A	SNP	TIMELESS	ENST00000553532	human	ensembl	74_37	-1	known	missense	c.2988	p.Q996H	0.711	pfam_TIMELESS_C	pfam_TIMELESS_C,pfam_Timeless	-	no_errors	TIMELESS	HGNC	ENSG00000111602				168	0	0	174	51	22.6667
LRP1	0	genome.wustl.edu	37	12	57574480	57574480	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	57574480	57574480	C	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.5417	p.S1806L	0.997	smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				79	0	0	91	25	21.5517
ARHGEF25	0	genome.wustl.edu	37	12	58005683	58005683	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	58005683	58005683	G	A	SNP	ARHGEF25	ENST00000286494	human	ensembl	74_37	+1	known	silent	c.6	p.R2	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF25	HGNC	ENSG00000240771				25	0	0	20	5	20
PLEKHG6	0	genome.wustl.edu	37	12	6425053	6425053	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	6425053	6425053	C	T	SNP	PLEKHG6	ENST00000011684	human	ensembl	74_37	+1	known	silent	c.574	p.L192	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG6	HGNC	ENSG00000008323				9	0	0	7	4	36.3636
C12orf66	0	genome.wustl.edu	37	12	64615816	64615816	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	64615816	64615816	A	C	SNP	C12orf66	ENST00000398055	human	ensembl	74_37	-1	known	missense	c.202	p.Y68D	1.000	pfam_DUF2003	pfam_DUF2003	-	no_errors	C12orf66	HGNC	ENSG00000174206				30	0	0	23	8	25.8065
LEMD3	0	genome.wustl.edu	37	12	65639549	65639549	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	65639549	65639549	C	T	SNP	LEMD3	ENST00000308330	human	ensembl	74_37	+1	known	missense	c.2488	p.R830C	0.998	NULL	pfam_Inner-Nucl-membr_MAN1,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom	-	no_errors	LEMD3	HGNC	ENSG00000174106				106	0	0	123	39	24.0741
CAPS2	0	genome.wustl.edu	37	12	75692742	75692742	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	75692742	75692742	C	T	SNP	CAPS2	ENST00000409445	human	ensembl	74_37	-1	known	missense	c.916	p.G306R	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CAPS2	HGNC	ENSG00000180881				58	0	0	55	15	21.4286
CEP290	0	genome.wustl.edu	37	12	88477714	88477714	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	88477714	88477714	C	T	SNP	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	silent	c.4728	p.V1576	0.934	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707				16	0	0	17	6	26.087
M6PR	0	genome.wustl.edu	37	12	9094486	9094486	+	Silent	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	9094486	9094486	T	A	SNP	M6PR	ENST00000000412	human	ensembl	74_37	-1	known	silent	c.762	p.A254	0.011	NULL	superfamily_Man6P_isomerase_rcpt-bd_dom,prints_Man_6_P_rcpt	-	no_errors	M6PR	HGNC	ENSG00000003056				75	0	0	100	30	23.0769
PZP	0	genome.wustl.edu	37	12	9349220	9349220	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	9349220	9349220	G	A	SNP	PZP	ENST00000261336	human	ensembl	74_37	-1	known	missense	c.929	p.T310M	0.000	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838				138	0	0	138	46	25
CCDC41	0	genome.wustl.edu	37	12	94794825	94794825	+	RNA	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	94794825	94794825	A	G	SNP	CCDC41	ENST00000551250	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CCDC41	HGNC	ENSG00000173588				29	0	0	40	14	25.9259
CDK17	0	genome.wustl.edu	37	12	96692660	96692660	+	Silent	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	96692660	96692660	T	G	SNP	CDK17	ENST00000261211	human	ensembl	74_37	-1	known	silent	c.702	p.T234	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK17	HGNC	ENSG00000059758				156	0	0	140	42	23.0769
SLC9A7P1	0	genome.wustl.edu	37	12	98849769	98849769	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	98849769	98849769	G	A	SNP	SLC9A7P1	ENST00000554295	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.993	-	-	-	no_errors	SLC9A7P1	HGNC	ENSG00000227825				115	0	0	93	41	30.597
NALCN	0	genome.wustl.edu	37	13	101720335	101720335	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	101720335	101720335	G	A	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.4381	p.L1461F	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				99	0	0	81	25	23.5849
COL4A2	0	genome.wustl.edu	37	13	111077160	111077160	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	111077160	111077160	A	G	SNP	COL4A2	ENST00000360467	human	ensembl	74_37	+1	known	missense	c.260	p.K87R	1.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A2	HGNC	ENSG00000134871				157	0	0	154	42	21.4286
LAMP1	0	genome.wustl.edu	37	13	113974719	113974719	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	113974719	113974719	C	T	SNP	LAMP1	ENST00000332556	human	ensembl	74_37	+1	known	silent	c.810	p.G270	0.000	pfam_Lysosome-assoc_membr_glycop	pfam_Lysosome-assoc_membr_glycop,prints_Lysosome-assoc_membr_glycop	-	no_errors	LAMP1	HGNC	ENSG00000185896				238	0	0	227	41	15.2985
GAS6	0	genome.wustl.edu	37	13	114535710	114535710	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	114535710	114535710	C	T	SNP	GAS6	ENST00000357389	human	ensembl	74_37	-1	known	missense	c.979	p.V327M	0.916	superfamily_ConA-like_lec_gl_sf	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	GAS6	HGNC	ENSG00000183087				86	0	0	82	25	23.3645
SACS	0	genome.wustl.edu	37	13	23910866	23910866	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	23910866	23910866	G	A	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	silent	c.7149	p.R2383	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				36	0	0	69	20	22.4719
ATP12A	0	genome.wustl.edu	37	13	25262530	25262530	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	25262530	25262530	C	T	SNP	ATP12A	ENST00000218548	human	ensembl	74_37	+1	known	missense	c.302	p.T101M	1.000	pfam_ATPase_P-typ_cation-transptr_N,smart_ATPase_P-typ_cation-transptr_N,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP12A	HGNC	ENSG00000075673				699	0	0	608	204	25.1232
ATP12A	0	genome.wustl.edu	37	13	25266681	25266681	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	25266681	25266681	A	G	SNP	ATP12A	ENST00000218548	human	ensembl	74_37	+1	known	missense	c.1201	p.T401A	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP12A	HGNC	ENSG00000075673				75	0	0	77	28	26.6667
CENPJ	0	genome.wustl.edu	37	13	25478079	25478079	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	25478079	25478079	G	A	SNP	CENPJ	ENST00000381884	human	ensembl	74_37	-1	known	missense	c.2810	p.A937V	0.994	NULL	pfam_Tcp10_C_dom	-	no_errors	CENPJ	HGNC	ENSG00000151849				214	0	0	231	61	20.8904
RASL11A	0	genome.wustl.edu	37	13	27845850	27845850	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	27845850	27845850	G	A	SNP	RASL11A	ENST00000241463	human	ensembl	74_37	+1	known	missense	c.256	p.V86I	0.035	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RASL11A	HGNC	ENSG00000122035				109	0	0	110	36	24.6575
UBL3	0	genome.wustl.edu	37	13	30341433	30341433	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	30341433	30341433	G	A	SNP	UBL3	ENST00000380680	human	ensembl	74_37	-1	known	missense	c.313	p.R105C	1.000	pirsf_M-anchored_Ub-fold_HCG-1	pirsf_M-anchored_Ub-fold_HCG-1,pfscan_Ubiquitin_supergroup	-	no_errors	UBL3	HGNC	ENSG00000122042				40	0	0	93	29	23.7705
STARD13	0	genome.wustl.edu	37	13	33685010	33685010	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	33685010	33685010	G	A	SNP	STARD13	ENST00000336934	human	ensembl	74_37	-1	known	missense	c.2642	p.S881L	0.990	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	STARD13	HGNC	ENSG00000133121				81	0	0	75	30	28.5714
SLC25A15	0	genome.wustl.edu	37	13	41381560	41381560	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	41381560	41381560	C	A	SNP	SLC25A15	ENST00000338625	human	ensembl	74_37	+1	known	silent	c.583	p.R195	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A15	HGNC	ENSG00000102743				197	1	0.505051	183	65	26.2097
ZC3H13	0	genome.wustl.edu	37	13	46541933	46541933	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	46541933	46541933	G	A	SNP	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	nonsense	c.4027	p.R1343*	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200				8	0	0	45	11	19.6429
RPS4XP16	0	genome.wustl.edu	37	13	52035095	52035095	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	52035095	52035095	G	A	SNP	RPS4XP16	ENST00000595905	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPS4XP16	HGNC	ENSG00000224892				25	0	0	32	6	15.7895
CCDC70	0	genome.wustl.edu	37	13	52439918	52439918	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	52439918	52439918	T	G	SNP	CCDC70	ENST00000242819	human	ensembl	74_37	+1	known	missense	c.404	p.F135C	0.003	NULL	NULL	-	no_errors	CCDC70	HGNC	ENSG00000123171				311	0	0	355	76	17.6334
UTP14C	0	genome.wustl.edu	37	13	52603136	52603136	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	52603136	52603136	G	T	SNP	UTP14C	ENST00000521776	human	ensembl	74_37	+1	known	missense	c.196	p.A66S	0.999	pfam_SSU_processome_Utp14	pfam_SSU_processome_Utp14	-	no_errors	UTP14C	HGNC	ENSG00000253797				330	1	0.302115	378	106	21.9008
SLITRK1	0	genome.wustl.edu	37	13	84455202	84455202	+	Silent	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	84455202	84455202	C	G	SNP	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	silent	c.441	p.P147	0.998	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235				180	0	0	155	41	20.9184
UGGT2	0	genome.wustl.edu	37	13	96536762	96536762	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	96536762	96536762	T	C	SNP	UGGT2	ENST00000376747	human	ensembl	74_37	-1	known	missense	c.3211	p.N1071D	1.000	pfam_UDP-g_GGtrans	pfam_UDP-g_GGtrans,pfam_Glyco_trans_8	-	no_errors	UGGT2	HGNC	ENSG00000102595				63	0	0	92	47	33.8129
EML1	0	genome.wustl.edu	37	14	100405583	100405583	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	100405583	100405583	G	T	SNP	EML1	ENST00000334192	human	ensembl	74_37	+1	known	silent	c.2298	p.R766	1.000	NULL	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML1	HGNC	ENSG00000066629				89	0	0	95	32	25.1969
CDC42BPB	0	genome.wustl.edu	37	14	103435030	103435030	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	103435030	103435030	C	T	SNP	CDC42BPB	ENST00000361246	human	ensembl	74_37	-1	known	silent	c.2019	p.A673	0.002	NULL	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	CDC42BPB	HGNC	ENSG00000198752				182	0	0	162	60	27.027
JAG2	0	genome.wustl.edu	37	14	105634420	105634420	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	105634420	105634420	C	T	SNP	JAG2	ENST00000331782	human	ensembl	74_37	-1	known	missense	c.91	p.E31K	1.000	pfam_Notch_ligand_N	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	JAG2	HGNC	ENSG00000184916				21	0	0	20	14	41.1765
OR4Q3	0	genome.wustl.edu	37	14	20216082	20216082	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	20216082	20216082	C	A	SNP	OR4Q3	ENST00000331723	human	ensembl	74_37	+1	known	missense	c.496	p.Q166K	0.020	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4Q3	HGNC	ENSG00000182652				36	0	0	155	18	10.4046
C14orf93	0	genome.wustl.edu	37	14	23467754	23467754	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	23467754	23467754	C	T	SNP	C14orf93	ENST00000299088	human	ensembl	74_37	-1	known	missense	c.479	p.R160Q	1.000	NULL	NULL	-	no_errors	C14orf93	HGNC	ENSG00000100802				24	0	0	45	8	15.0943
HOMEZ	0	genome.wustl.edu	37	14	23745515	23745515	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	23745515	23745515	G	A	SNP	HOMEZ	ENST00000431326	human	ensembl	74_37	-1	known	missense	c.928	p.P310S	0.638	NULL	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOMEZ	HGNC	ENSG00000215271				46	0	0	61	24	28.2353
MYH7	0	genome.wustl.edu	37	14	23898213	23898213	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	23898213	23898213	C	T	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.1358	p.R453H	0.996	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054				119	0	0	102	27	20.9302
LRRC16B	0	genome.wustl.edu	37	14	24523631	24523631	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	24523631	24523631	G	T	SNP	LRRC16B	ENST00000342740	human	ensembl	74_37	+1	known	missense	c.273	p.M91I	0.974	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648				117	0	0	93	29	23.7705
NOVA1	0	genome.wustl.edu	37	14	26917185	26917185	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	26917185	26917185	T	C	SNP	NOVA1	ENST00000539517	human	ensembl	74_37	-1	known	missense	c.1504	p.N502D	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	NOVA1	HGNC	ENSG00000139910				76	0	0	80	29	26.6055
MIPOL1	0	genome.wustl.edu	37	14	37838737	37838737	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	37838737	37838737	C	T	SNP	MIPOL1	ENST00000327441	human	ensembl	74_37	+1	known	nonsense	c.844	p.Q282*	1.000	NULL	NULL	-	no_errors	MIPOL1	HGNC	ENSG00000151338				55	0	0	87	29	25
L2HGDH	0	genome.wustl.edu	37	14	50734531	50734531	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	50734531	50734531	C	T	SNP	L2HGDH	ENST00000267436	human	ensembl	74_37	-1	known	missense	c.1004	p.R335Q	1.000	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase	-	no_errors	L2HGDH	HGNC	ENSG00000087299				142	0	0	137	34	19.883
SYNE2	0	genome.wustl.edu	37	14	64653220	64653220	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	64653220	64653220	G	A	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.17635	p.V5879I	0.624	smart_Spectrin/alpha-actinin	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				274	0	0	263	81	23.5465
PLEK2	0	genome.wustl.edu	37	14	67862233	67862233	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	67862233	67862233	C	T	SNP	PLEK2	ENST00000216446	human	ensembl	74_37	-1	known	missense	c.275	p.R92Q	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,pfam_DEP_dom,smart_Pleckstrin_homology,smart_DEP_dom,pfscan_DEP_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEK2	HGNC	ENSG00000100558				215	0	0	194	66	25.3846
SIPA1L1	0	genome.wustl.edu	37	14	72056033	72056033	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	72056033	72056033	G	A	SNP	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	missense	c.1444	p.V482M	0.990	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555				28	0	0	68	28	29.1667
LTBP2	0	genome.wustl.edu	37	14	75078312	75078312	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	75078312	75078312	C	T	SNP	LTBP2	ENST00000261978	human	ensembl	74_37	-1	known	silent	c.336	p.S112	0.396	NULL	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP2	HGNC	ENSG00000119681				17	0	0	19	4	17.3913
TTLL5	0	genome.wustl.edu	37	14	76219283	76219283	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	76219283	76219283	G	A	SNP	TTLL5	ENST00000298832	human	ensembl	74_37	+1	known	missense	c.1535	p.R512H	0.999	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL5	HGNC	ENSG00000119685				68	0	0	78	29	27.1028
FLRT2	0	genome.wustl.edu	37	14	86089507	86089507	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	86089507	86089507	C	T	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	missense	c.1649	p.A550V	0.996	NULL	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070				144	1	0.689655	164	46	21.9048
TTC7B	0	genome.wustl.edu	37	14	91142956	91142956	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	91142956	91142956	G	A	SNP	TTC7B	ENST00000357056	human	ensembl	74_37	-1	known	missense	c.1063	p.R355C	1.000	NULL	pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC7B	HGNC	ENSG00000165914				113	0	0	105	37	26.0563
UNC79	0	genome.wustl.edu	37	14	94173133	94173133	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	94173133	94173133	G	A	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	silent	c.7857	p.S2619	0.023	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				108	0	0	111	39	26
TUBGCP5	0	genome.wustl.edu	37	15	22872545	22872545	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	22872545	22872545	A	G	SNP	TUBGCP5	ENST00000453949	human	ensembl	74_37	+1	known	silent	c.3074	p.*1025	0.000	NULL	pfam_TUBGCP	-	no_errors	TUBGCP5	HGNC	ENSG00000153575				57	0	0	59	16	21.3333
SNHG14	0	genome.wustl.edu	37	15	25339068	25339068	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	25339068	25339068	C	T	SNP	SNHG14	ENST00000546682	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				17	0	0	17	5	22.7273
ATP10A	0	genome.wustl.edu	37	15	25959016	25959016	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	25959016	25959016	G	A	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.2149	p.R717W	0.940	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190				91	0	0	97	31	24.2188
OCA2	0	genome.wustl.edu	37	15	28230313	28230313	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	28230313	28230313	G	A	SNP	OCA2	ENST00000354638	human	ensembl	74_37	-1	known	missense	c.1261	p.R421W	0.786	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	-	no_errors	OCA2	HGNC	ENSG00000104044				51	0	0	37	16	30.1887
HERC2	0	genome.wustl.edu	37	15	28386591	28386591	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	28386591	28386591	G	A	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.12002	p.T4001M	1.000	superfamily_RCC1/BLIP-II,smart_Beta-propeller_rpt_TECPR,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				72	0	0	76	22	22.449
HERC2	0	genome.wustl.edu	37	15	28482137	28482137	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	28482137	28482137	C	T	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	silent	c.3975	p.P1325	0.929	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				123	0	0	106	42	28.3784
TJP1	0	genome.wustl.edu	37	15	30092850	30092850	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	30092850	30092850	C	A	SNP	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	missense	c.83	p.R28M	1.000	pfam_PDZ,superfamily_PDZ,pfscan_PDZ	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067				163	0	0	142	35	19.774
RYR3	0	genome.wustl.edu	37	15	34040421	34040421	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	34040421	34040421	G	A	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.8096	p.R2699Q	1.000	superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				41	0	0	58	20	25.641
NUTM1	0	genome.wustl.edu	37	15	34642991	34642991	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	34642991	34642991	C	T	SNP	NUTM1	ENST00000333756	human	ensembl	74_37	+1	known	missense	c.812	p.T271I	0.990	NULL	NULL	-	no_errors	NUTM1	HGNC	ENSG00000184507				53	0	0	57	22	27.8481
VPS18	0	genome.wustl.edu	37	15	41191772	41191772	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	41191772	41191772	G	A	SNP	VPS18	ENST00000220509	human	ensembl	74_37	+1	known	silent	c.756	p.T252	0.536	NULL	pfam_Pep3_Vps18,pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold	-	no_errors	VPS18	HGNC	ENSG00000104142				196	0	0	164	61	27.1111
INO80	0	genome.wustl.edu	37	15	41277580	41277580	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	41277580	41277580	G	A	SNP	INO80	ENST00000361937	human	ensembl	74_37	-1	known	nonsense	c.3877	p.R1293*	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	INO80	HGNC	ENSG00000128908				86	0	0	95	30	24
MAPKBP1	0	genome.wustl.edu	37	15	42105142	42105142	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	42105142	42105142	G	A	SNP	MAPKBP1	ENST00000456763	human	ensembl	74_37	+1	known	missense	c.662	p.G221D	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802				118	0	0	121	40	24.8447
JMJD7-PLA2G4B	0	genome.wustl.edu	37	15	42134087	42134087	+	Silent	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	42134087	42134087	T	A	SNP	JMJD7-PLA2G4B	ENST00000382448	human	ensembl	74_37	+1	known	silent	c.1254	p.T418	0.000	NULL	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_JmjC_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_JmjC_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	JMJD7-PLA2G4B	HGNC	ENSG00000168970				29	0	0	25	4	13.7931
GANC	0	genome.wustl.edu	37	15	42602621	42602621	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	42602621	42602621	C	T	SNP	GANC	ENST00000318010	human	ensembl	74_37	+1	known	missense	c.863	p.S288L	0.993	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom	-	no_errors	GANC	HGNC	ENSG00000214013				41	0	0	66	31	31.9588
CDAN1	0	genome.wustl.edu	37	15	43028259	43028259	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	43028259	43028259	C	A	SNP	CDAN1	ENST00000356231	human	ensembl	74_37	-1	known	missense	c.587	p.R196M	1.000	NULL	NULL	-	no_errors	CDAN1	HGNC	ENSG00000140326				66	0	0	51	15	22.7273
MAP1A	0	genome.wustl.edu	37	15	43815140	43815140	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	43815140	43815140	G	A	SNP	MAP1A	ENST00000399453	human	ensembl	74_37	+1	known	missense	c.1469	p.R490H	0.569	NULL	NULL	-	no_errors	MAP1A	HGNC	ENSG00000166963				51	0	0	52	15	22.3881
DUOX2	0	genome.wustl.edu	37	15	45404834	45404834	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	45404834	45404834	C	T	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	silent	c.243	p.P81	0.710	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279				66	0	0	59	27	31.3953
DUOXA2	0	genome.wustl.edu	37	15	45409435	45409435	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	45409435	45409435	C	T	SNP	DUOXA2	ENST00000323030	human	ensembl	74_37	+1	known	missense	c.701	p.P234L	0.013	pfam_Dual_oxidase_maturation_fac	pfam_Dual_oxidase_maturation_fac	-	no_errors	DUOXA2	HGNC	ENSG00000140274				23	0	0	27	4	12.9032
GATM	0	genome.wustl.edu	37	15	45660384	45660384	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	45660384	45660384	G	A	SNP	GATM	ENST00000396659	human	ensembl	74_37	-1	known	missense	c.559	p.R187C	1.000	NULL	NULL	-	no_errors	GATM	HGNC	ENSG00000171766				42	0	0	47	20	29.8507
SEMA6D	0	genome.wustl.edu	37	15	48052032	48052032	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	48052032	48052032	C	T	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	silent	c.37	p.L13	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872				28	0	0	55	15	21.4286
FBN1	0	genome.wustl.edu	37	15	48782150	48782150	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	48782150	48782150	C	T	SNP	FBN1	ENST00000316623	human	ensembl	74_37	-1	known	missense	c.2980	p.E994K	1.000	pfam_TB_dom,superfamily_TB_dom,pirsf_FBN	pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN1	HGNC	ENSG00000166147				134	1	0.740741	117	40	25.4777
FAM227B	0	genome.wustl.edu	37	15	49907322	49907322	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	49907322	49907322	G	T	SNP	FAM227B	ENST00000299338	human	ensembl	74_37	-1	known	missense	c.47	p.P16H	0.000	NULL	NULL	-	no_errors	FAM227B	HGNC	ENSG00000166262				199	0	0	261	79	23.2353
GABPB1	0	genome.wustl.edu	37	15	50570857	50570857	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	50570857	50570857	C	T	SNP	GABPB1	ENST00000220429	human	ensembl	74_37	-1	known	missense	c.1160	p.R387H	0.703	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	GABPB1	HGNC	ENSG00000104064				159	0	0	188	45	19.3133
SCG3	0	genome.wustl.edu	37	15	52011689	52011689	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	52011689	52011689	C	T	SNP	SCG3	ENST00000220478	human	ensembl	74_37	+1	known	missense	c.1373	p.A458V	0.996	NULL	NULL	-	no_errors	SCG3	HGNC	ENSG00000104112				43	0	0	53	14	20.8955
PRTG	0	genome.wustl.edu	37	15	55971645	55971645	+	Splice_Site	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	55971645	55971645	T	C	SNP	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	splice_site	c.974-2	e7-2	0.995	-	-	-	no_errors	PRTG	HGNC	ENSG00000166450				31	0	0	57	18	24
RFX7	0	genome.wustl.edu	37	15	56386864	56386864	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	56386864	56386864	C	A	SNP	RFX7	ENST00000423270	human	ensembl	74_37	-1	known	missense	c.3062	p.R1021M	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX7	HGNC	ENSG00000181827				52	0	0	70	16	18.6047
FAM63B	0	genome.wustl.edu	37	15	59080107	59080107	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	59080107	59080107	G	A	SNP	FAM63B	ENST00000559228	human	ensembl	74_37	+1	known	silent	c.843	p.V281	1.000	pfam_DUF544	pfam_DUF544	-	no_errors	FAM63B	HGNC	ENSG00000128923				150	0	0	133	30	18.4049
FOXB1	0	genome.wustl.edu	37	15	60297902	60297902	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	60297902	60297902	C	T	SNP	FOXB1	ENST00000396057	human	ensembl	74_37	+1	known	missense	c.740	p.P247L	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXB1	HGNC	ENSG00000171956				20	0	0	13	4	23.5294
TLN2	0	genome.wustl.edu	37	15	63004189	63004189	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	63004189	63004189	C	T	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	silent	c.2547	p.A849	0.009	NULL	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914				50	0	0	84	15	15.1515
LACTB	0	genome.wustl.edu	37	15	63433525	63433525	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	63433525	63433525	G	A	SNP	LACTB	ENST00000261893	human	ensembl	74_37	+1	known	missense	c.1165	p.V389M	1.000	pfam_Beta-lactam-related,superfamily_Beta-lactam/transpept-like	pfam_Beta-lactam-related,superfamily_Beta-lactam/transpept-like	-	no_errors	LACTB	HGNC	ENSG00000103642				111	0	0	129	51	28.3333
SNX1	0	genome.wustl.edu	37	15	64419453	64419453	+	Splice_Site	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	64419453	64419453	T	C	SNP	SNX1	ENST00000559844	human	ensembl	74_37	+1	known	splice_site	c.731+2	e7+2	0.996	-	-	-	no_errors	SNX1	HGNC	ENSG00000028528				26	0	0	34	16	32
LCTL	0	genome.wustl.edu	37	15	66845477	66845477	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	66845477	66845477	A	G	SNP	LCTL	ENST00000341509	human	ensembl	74_37	-1	known	missense	c.1042	p.Y348H	1.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCTL	HGNC	ENSG00000188501				179	1	0.555556	182	67	26.9076
UACA	0	genome.wustl.edu	37	15	70961645	70961645	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	70961645	70961645	G	A	SNP	UACA	ENST00000322954	human	ensembl	74_37	-1	known	nonsense	c.1378	p.R460*	0.390	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Prefoldin,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_T_SNARE_dom,prints_Ankyrin_rpt	-	no_errors	UACA	HGNC	ENSG00000137831				106	0	0	223	61	21.4789
NEO1	0	genome.wustl.edu	37	15	73418762	73418762	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	73418762	73418762	T	C	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	silent	c.729	p.P243	0.001	pfscan_Ig-like_dom	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141				124	0	0	168	53	23.9819
TMC3	0	genome.wustl.edu	37	15	81631013	81631013	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	81631013	81631013	G	A	SNP	TMC3	ENST00000359440	human	ensembl	74_37	-1	known	silent	c.2064	p.P688	0.003	NULL	pfam_TMC	-	no_errors	TMC3	HGNC	ENSG00000188869				53	0	0	90	19	17.4312
MEX3B	0	genome.wustl.edu	37	15	82336392	82336392	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	82336392	82336392	C	T	SNP	MEX3B	ENST00000329713	human	ensembl	74_37	-1	known	silent	c.819	p.T273	0.991	NULL	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3B	HGNC	ENSG00000183496				53	0	0	32	23	41.8182
BTBD1	0	genome.wustl.edu	37	15	83735743	83735743	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	83735743	83735743	G	A	SNP	BTBD1	ENST00000261721	human	ensembl	74_37	-1	known	missense	c.161	p.S54L	1.000	superfamily_BTB/POZ_fold	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD1	HGNC	ENSG00000064726				16	0	0	13	3	18.75
WDR73	0	genome.wustl.edu	37	15	85191826	85191826	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	85191826	85191826	G	A	SNP	WDR73	ENST00000434634	human	ensembl	74_37	-1	known	missense	c.229	p.R77C	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR73	HGNC	ENSG00000177082				128	0	0	136	44	24.4444
AGBL1	0	genome.wustl.edu	37	15	86838491	86838491	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	86838491	86838491	T	C	SNP	AGBL1	ENST00000441037	human	ensembl	74_37	+1	known	silent	c.2088	p.H696	0.999	NULL	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGBL1	HGNC	ENSG00000166748				10	0	0	40	11	21.5686
DET1	0	genome.wustl.edu	37	15	89074530	89074530	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	89074530	89074530	T	C	SNP	DET1	ENST00000444300	human	ensembl	74_37	-1	known	missense	c.440	p.N147S	1.000	NULL	pfam_De-etiolated_protein_1_Det1	-	no_errors	DET1	HGNC	ENSG00000140543				37	0	0	64	15	18.9873
BLM	0	genome.wustl.edu	37	15	91346819	91346819	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	91346819	91346819	G	A	SNP	BLM	ENST00000355112	human	ensembl	74_37	+1	known	missense	c.3427	p.E1143K	1.000	pfam_RQC_domain,smart_RQC_domain,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_RQC_domain,pfam_BDHCT,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_HRDC-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	BLM	HGNC	ENSG00000197299				153	0	0	151	44	22.5641
IGF1R	0	genome.wustl.edu	37	15	99434589	99434589	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	99434589	99434589	G	A	SNP	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	missense	c.676	p.E226K	0.915	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Furin-like_Cys-rich_dom,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443				29	0	0	25	9	26.4706
SYNM	0	genome.wustl.edu	37	15	99670476	99670476	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	99670476	99670476	C	T	SNP	SYNM	ENST00000336292	human	ensembl	74_37	+1	known	silent	c.1908	p.T636	0.002	NULL	pfam_IF	-	no_errors	SYNM	HGNC	ENSG00000182253				38	0	0	44	8	15.3846
CIITA	0	genome.wustl.edu	37	16	11001797	11001797	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	11001797	11001797	C	T	SNP	CIITA	ENST00000324288	human	ensembl	74_37	+1	known	silent	c.2448	p.A816	0.000	NULL	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,prints_MHC_II_transact	-	no_errors	CIITA	HGNC	ENSG00000179583				79	0	0	80	21	20.7921
ENSG00000212228	0	genome.wustl.edu	37	16	11367984	11367984	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	11367984	11367984	C	T	SNP	ENSG00000212228	ENST00000390926	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.223	-	-	-	no_errors	SNORA48	RFAM	ENSG00000212228				23	0	0	28	4	12.5
TNFRSF17	0	genome.wustl.edu	37	16	12061469	12061469	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	12061469	12061469	G	A	SNP	TNFRSF17	ENST00000053243	human	ensembl	74_37	+1	known	missense	c.320	p.S107N	0.000	pirsf_TNFR_17	pfam_BCMA_Tall-1-bd,pirsf_TNFR_17,prints_TNFR_17,prints_TNFR_13C	-	no_errors	TNFRSF17	HGNC	ENSG00000048462				118	0	0	150	26	14.7727
NPIPP1	0	genome.wustl.edu	37	16	15204314	15204314	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	15204314	15204314	G	A	SNP	NPIPP1	ENST00000534799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NPIPP1	HGNC	ENSG00000188599				88	0	0	78	31	28.4404
HAGH	0	genome.wustl.edu	37	16	1867196	1867196	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	1867196	1867196	C	A	SNP	HAGH	ENST00000397356	human	ensembl	74_37	-1	known	missense	c.618	p.E206D	0.843	pfam_Beta-lactamas-like,smart_Beta-lactamas-like,tigrfam_Hydroxyacylglutathione_Hdrlase	pfam_Beta-lactamas-like,smart_Beta-lactamas-like,tigrfam_Hydroxyacylglutathione_Hdrlase	-	no_errors	HAGH	HGNC	ENSG00000063854				72	0	0	73	15	17.0455
SMG1	0	genome.wustl.edu	37	16	18844470	18844470	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	18844470	18844470	G	A	SNP	SMG1	ENST00000389467	human	ensembl	74_37	-1	known	missense	c.8584	p.R2862W	1.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106				54	0	0	74	16	17.7778
TMC5	0	genome.wustl.edu	37	16	19501878	19501878	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	19501878	19501878	C	A	SNP	TMC5	ENST00000396229	human	ensembl	74_37	+1	known	missense	c.2735	p.T912N	1.000	NULL	pfam_TMC	-	no_errors	TMC5	HGNC	ENSG00000103534				263	0	0	268	85	24.0793
ACSM2A	0	genome.wustl.edu	37	16	20482476	20482476	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	20482476	20482476	T	C	SNP	ACSM2A	ENST00000219054	human	ensembl	74_37	+1	known	silent	c.678	p.G226	0.008	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2A	HGNC	ENSG00000183747				46	0	0	103	37	26.4286
DNAH3	0	genome.wustl.edu	37	16	20975756	20975756	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	20975756	20975756	T	C	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	silent	c.9450	p.Q3150	0.967	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486				279	1	0.357143	270	93	25.6198
NPIPB3	0	genome.wustl.edu	37	16	21416178	21416178	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	21416178	21416178	G	T	SNP	NPIPB3	ENST00000458643	human	ensembl	74_37	-1	known	missense	c.530	p.P177H	0.093	NULL	NULL	-	no_errors	NPIPB3	HGNC	ENSG00000169246				172	1	0.578035	192	18	8.57143
NPIPB4	0	genome.wustl.edu	37	16	21854828	21854828	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	21854828	21854828	C	T	SNP	NPIPB4	ENST00000415645	human	ensembl	74_37	-1	known	missense	c.424	p.V142I	0.001	NULL	NULL	-	no_errors	NPIPB4	HGNC	ENSG00000185864				379	0	0	406	55	11.9306
HS3ST2	0	genome.wustl.edu	37	16	22826074	22826074	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	22826074	22826074	G	A	SNP	HS3ST2	ENST00000261374	human	ensembl	74_37	+1	known	missense	c.143	p.R48H	0.996	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST2	HGNC	ENSG00000122254				27	0	0	25	5	16.6667
CHP2	0	genome.wustl.edu	37	16	23767738	23767738	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	23767738	23767738	G	A	SNP	CHP2	ENST00000300113	human	ensembl	74_37	+1	known	missense	c.382	p.D128N	0.997	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CHP2	HGNC	ENSG00000166869				53	0	0	42	15	26.3158
CCNF	0	genome.wustl.edu	37	16	2487153	2487153	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	2487153	2487153	G	A	SNP	CCNF	ENST00000397066	human	ensembl	74_37	+1	known	missense	c.370	p.A124T	0.997	superfamily_F-box_dom	pfam_Cyclin_N,pfam_Cyclin_C-dom,pfam_F-box_dom,superfamily_Cyclin-like,superfamily_F-box_dom,smart_F-box_dom,smart_Cyclin-like,pfscan_F-box_dom	-	no_errors	CCNF	HGNC	ENSG00000162063				247	0	0	217	80	26.936
AMDHD2	0	genome.wustl.edu	37	16	2577820	2577820	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	2577820	2577820	G	A	SNP	AMDHD2	ENST00000563633	human	ensembl	74_37	+1	known	missense	c.407	p.R136H	0.063	NULL	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite	-	no_errors	AMDHD2	HGNC	ENSG00000162066				23	0	0	24	16	40
GTF3C1	0	genome.wustl.edu	37	16	27514179	27514179	+	Splice_Site	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	27514179	27514179	C	T	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	splice_site	c.1907+1	e11+1	1.000	-	-	-	no_errors	GTF3C1	HGNC	ENSG00000077235				8	0	0	13	6	31.5789
XPO6	0	genome.wustl.edu	37	16	28167579	28167579	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	28167579	28167579	G	A	SNP	XPO6	ENST00000304658	human	ensembl	74_37	-1	known	missense	c.913	p.R305C	0.998	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO6	HGNC	ENSG00000169180				76	0	0	92	36	28.125
RRN3P2	0	genome.wustl.edu	37	16	29110458	29110458	+	RNA	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	29110458	29110458	T	C	SNP	RRN3P2	ENST00000427965	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	RRN3P2	HGNC	ENSG00000103472				39	0	0	52	9	14.7541
MVP	0	genome.wustl.edu	37	16	29841818	29841818	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	29841818	29841818	G	A	SNP	MVP	ENST00000565830	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MVP	HGNC	ENSG00000013364				114	0	0	109	44	28.7582
ZSCAN10	0	genome.wustl.edu	37	16	3140201	3140201	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	3140201	3140201	G	A	SNP	ZSCAN10	ENST00000252463	human	ensembl	74_37	-1	known	missense	c.1069	p.R357C	0.800	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN10	HGNC	ENSG00000130182				142	1	0.699301	164	45	21.5311
ITGAD	0	genome.wustl.edu	37	16	31434704	31434704	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	31434704	31434704	T	C	SNP	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	missense	c.2891	p.I964T	0.635	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886				124	0	0	84	35	29.4118
ZNF597	0	genome.wustl.edu	37	16	3487250	3487250	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	3487250	3487250	T	A	SNP	ZNF597	ENST00000301744	human	ensembl	74_37	-1	known	missense	c.449	p.E150V	0.891	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF597	HGNC	ENSG00000167981				238	0	0	279	100	26.3852
TFAP4	0	genome.wustl.edu	37	16	4308193	4308193	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	4308193	4308193	G	A	SNP	TFAP4	ENST00000204517	human	ensembl	74_37	-1	known	nonsense	c.880	p.R294*	0.957	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFAP4	HGNC	ENSG00000090447				65	0	0	52	13	20
ABCC12	0	genome.wustl.edu	37	16	48174686	48174686	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	48174686	48174686	G	A	SNP	ABCC12	ENST00000311303	human	ensembl	74_37	-1	known	missense	c.569	p.T190M	0.995	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC12	HGNC	ENSG00000140798				202	0	0	191	66	25.6809
NKD1	0	genome.wustl.edu	37	16	50667286	50667286	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	50667286	50667286	G	A	SNP	NKD1	ENST00000268459	human	ensembl	74_37	+1	known	missense	c.1007	p.R336Q	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	NKD1	HGNC	ENSG00000140807				157	0	0	145	59	28.9216
CHD9	0	genome.wustl.edu	37	16	53358011	53358011	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	53358011	53358011	G	A	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	missense	c.7898	p.R2633Q	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200				111	0	0	207	54	20.6897
NUDT21	0	genome.wustl.edu	37	16	56485017	56485017	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	56485017	56485017	A	C	SNP	NUDT21	ENST00000300291	human	ensembl	74_37	-1	known	missense	c.98	p.L33R	1.000	pirsf_Cleav_polyA_spec_factor_su5	superfamily_NUDIX_hydrolase_dom-like,pirsf_Cleav_polyA_spec_factor_su5	-	no_errors	NUDT21	HGNC	ENSG00000167005				159	0	0	174	36	17.1429
BBS2	0	genome.wustl.edu	37	16	56536265	56536265	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	56536265	56536265	C	T	SNP	BBS2	ENST00000245157	human	ensembl	74_37	-1	known	silent	c.1044	p.L348	1.000	pirsf_Bardet-Biedl_syndrome_2_prot	superfamily_WD40_repeat_dom,pirsf_Bardet-Biedl_syndrome_2_prot	-	no_errors	BBS2	HGNC	ENSG00000125124				290	0	0	282	99	25.9843
CX3CL1	0	genome.wustl.edu	37	16	57416231	57416231	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	57416231	57416231	G	A	SNP	CX3CL1	ENST00000006053	human	ensembl	74_37	+1	known	missense	c.481	p.V161M	0.000	NULL	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CX3CL1	-	no_errors	CX3CL1	HGNC	ENSG00000006210				91	0	0	80	30	27.2727
CCDC135	0	genome.wustl.edu	37	16	57760170	57760170	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	57760170	57760170	C	T	SNP	CCDC135	ENST00000360716	human	ensembl	74_37	+1	known	missense	c.1949	p.T650M	0.997	NULL	NULL	-	no_errors	CCDC135	HGNC	ENSG00000159625				92	0	0	99	18	15.3846
ENSG00000260240	0	genome.wustl.edu	37	16	59788699	59788699	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	59788699	59788699	C	T	SNP	ENSG00000260240	ENST00000565921	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	RP11-105C20.2	Clone_based_vega_gene	ENSG00000260240				88	0	0	108	41	27.5168
CDH11	0	genome.wustl.edu	37	16	65005898	65005898	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	65005898	65005898	T	A	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.1460	p.K487M	1.000	superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937				33	0	0	59	7	10.6061
CDH16	0	genome.wustl.edu	37	16	66948222	66948222	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	66948222	66948222	G	A	SNP	CDH16	ENST00000299752	human	ensembl	74_37	-1	known	missense	c.677	p.T226I	0.195	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH16	HGNC	ENSG00000166589				133	0	0	145	18	11.0429
B3GNT9	0	genome.wustl.edu	37	16	67184159	67184159	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	67184159	67184159	G	A	SNP	B3GNT9	ENST00000449549	human	ensembl	74_37	-1	known	missense	c.230	p.T77M	1.000	NULL	pfam_Glyco_trans_31,pfam_Fringe-like	-	no_errors	B3GNT9	HGNC	ENSG00000237172				24	0	0	37	10	21.2766
RAB40C	0	genome.wustl.edu	37	16	675439	675439	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	675439	675439	T	G	SNP	RAB40C	ENST00000248139	human	ensembl	74_37	+1	known	missense	c.272	p.L91R	0.998	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_SOCS_C,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,smart_SOCS_C,pfscan_SOCS_C,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB40C	HGNC	ENSG00000197562				47	0	0	57	10	14.9254
ACD	0	genome.wustl.edu	37	16	67692931	67692931	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	67692931	67692931	T	C	SNP	ACD	ENST00000393919	human	ensembl	74_37	-1	known	missense	c.803	p.Q268R	0.029	NULL	NULL	-	no_errors	ACD	HGNC	ENSG00000102977				111	0	0	115	32	21.7687
DUS2	0	genome.wustl.edu	37	16	68104974	68104974	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	68104974	68104974	G	A	SNP	DUS2	ENST00000358896	human	ensembl	74_37	+1	known	missense	c.773	p.R258Q	0.668	pfam_tRNA_hU_synthase	pfam_tRNA_hU_synthase,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom	-	no_errors	DUS2	HGNC	ENSG00000167264				125	0	0	105	38	26.5734
NOB1	0	genome.wustl.edu	37	16	69782198	69782198	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	69782198	69782198	G	A	SNP	NOB1	ENST00000268802	human	ensembl	74_37	-1	known	missense	c.761	p.A254V	1.000	pirsf_D-site_20S_pre-rRNA_nuclease	pfam_NOB1_Zn-bd,smart_PIN_dom,pirsf_D-site_20S_pre-rRNA_nuclease	-	no_errors	NOB1	HGNC	ENSG00000141101				57	0	0	60	22	26.8293
LOC100506060	0	genome.wustl.edu	37	16	70253871	70253871	+	RNA	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	70253871	70253871	A	G	SNP	LOC100506060	ENST00000573141	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-296I10.6	Clone_based_vega_gene	ENSG00000261556				9	0	0	29	3	9.375
COG4	0	genome.wustl.edu	37	16	70514920	70514920	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	70514920	70514920	C	T	SNP	COG4	ENST00000323786	human	ensembl	74_37	-1	known	missense	c.2363	p.R788H	1.000	NULL	pfam_COG_su4,smart_COG_su4	-	no_errors	COG4	HGNC	ENSG00000103051				110	0	0	111	33	22.9167
IL34	0	genome.wustl.edu	37	16	70693588	70693588	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	70693588	70693588	A	T	SNP	IL34	ENST00000288098	human	ensembl	74_37	+1	known	missense	c.470	p.K157M	1.000	NULL	prints_IL-34	-	no_errors	IL34	HGNC	ENSG00000157368				26	0	0	35	8	18.6047
MTSS1L	0	genome.wustl.edu	37	16	70697624	70697624	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	70697624	70697624	G	A	SNP	MTSS1L	ENST00000338779	human	ensembl	74_37	-1	known	missense	c.2200	p.R734C	1.000	NULL	pfam_IRSp53/MIM_homology_IMD	-	no_errors	MTSS1L	HGNC	ENSG00000132613				8	0	0	8	4	33.3333
PHLPP2	0	genome.wustl.edu	37	16	71715761	71715761	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	71715761	71715761	G	A	SNP	PHLPP2	ENST00000356272	human	ensembl	74_37	-1	known	silent	c.783	p.L261	0.951	NULL	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom	-	no_errors	PHLPP2	HGNC	ENSG00000040199				133	0	0	114	36	24
WDR59	0	genome.wustl.edu	37	16	74976648	74976648	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	74976648	74976648	T	C	SNP	WDR59	ENST00000262144	human	ensembl	74_37	-1	known	missense	c.522	p.I174M	0.994	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_UBQ-conjugating_enzyme/RWD,smart_WD40_repeat,smart_RWD-domain,pfscan_RWD-domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR59	HGNC	ENSG00000103091				84	0	0	86	28	24.5614
TERF2IP	0	genome.wustl.edu	37	16	75681991	75681991	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	75681991	75681991	C	T	SNP	TERF2IP	ENST00000300086	human	ensembl	74_37	+1	known	silent	c.211	p.L71	0.040	superfamily_BRCT_dom	pfam_Rap1_Myb_dom,superfamily_Homeodomain-like,superfamily_BRCT_dom	-	no_errors	TERF2IP	HGNC	ENSG00000166848				17	0	0	11	5	31.25
RBFOX1	0	genome.wustl.edu	37	16	7703854	7703854	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	7703854	7703854	C	T	SNP	RBFOX1	ENST00000547372	human	ensembl	74_37	+1	known	silent	c.924	p.A308	0.967	pfam_Fox-1_C_dom,pirsf_RNA-bd_Fox-1	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC	ENSG00000078328				51	0	0	50	12	19.3548
CDYL2	0	genome.wustl.edu	37	16	80718806	80718806	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	80718806	80718806	C	T	SNP	CDYL2	ENST00000570137	human	ensembl	74_37	-1	known	missense	c.245	p.R82Q	0.925	NULL	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL2	HGNC	ENSG00000166446				123	0	0	117	41	25.9494
PKD1L2	0	genome.wustl.edu	37	16	81211460	81211460	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	81211460	81211460	C	T	SNP	PKD1L2	ENST00000337114	human	ensembl	74_37	-1	known	missense	c.2389	p.A797T	0.000	pfam_PKD/REJ-like,pfscan_REJ-like	pfam_Lectin_gal-bd_dom,pfam_C-type_lectin,pfam_PKD/REJ-like,superfamily_C-type_lectin_fold,superfamily_Coatomer/clathrin_app_Ig-like,superfamily_PKD_dom,smart_C-type_lectin,pfscan_C-type_lectin,pfscan_Lectin_gal-bd_dom,pfscan_REJ-like	-	no_errors	PKD1L2	HGNC	ENSG00000166473				170	0	0	201	49	19.6
KCNG4	0	genome.wustl.edu	37	16	84256030	84256030	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	84256030	84256030	C	T	SNP	KCNG4	ENST00000308251	human	ensembl	74_37	-1	known	silent	c.1353	p.T451	0.727	pfam_2pore_dom_K_chnl_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG4	HGNC	ENSG00000168418				137	0	0	155	65	29.5455
FOXC2	0	genome.wustl.edu	37	16	86601603	86601603	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	86601603	86601603	C	T	SNP	FOXC2	ENST00000320354	human	ensembl	74_37	+1	known	missense	c.662	p.A221V	0.985	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXC2	HGNC	ENSG00000176692				10	0	0	12	6	33.3333
TMEM186	0	genome.wustl.edu	37	16	8889880	8889880	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	8889880	8889880	G	A	SNP	TMEM186	ENST00000333050	human	ensembl	74_37	-1	known	silent	c.571	p.L191	0.012	NULL	NULL	-	no_errors	TMEM186	HGNC	ENSG00000184857				202	0	0	174	52	23.0088
PABPN1L	0	genome.wustl.edu	37	16	88931440	88931440	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	88931440	88931440	G	A	SNP	PABPN1L	ENST00000378358	human	ensembl	74_37	-1	known	missense	c.556	p.H186Y	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PABPN1L	HGNC	ENSG00000205022				9	0	0	9	4	30.7692
VPS9D1	0	genome.wustl.edu	37	16	89783024	89783024	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	89783024	89783024	G	A	SNP	VPS9D1	ENST00000389386	human	ensembl	74_37	-1	known	missense	c.277	p.R93C	0.000	NULL	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	-	no_errors	VPS9D1	HGNC	ENSG00000075399				203	0	0	165	52	23.9631
ZNF276	0	genome.wustl.edu	37	16	89789790	89789790	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	89789790	89789790	G	A	SNP	ZNF276	ENST00000443381	human	ensembl	74_37	+1	known	missense	c.679	p.V227I	0.007	NULL	pfam_Znf_AD,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF276	HGNC	ENSG00000158805				70	0	0	71	27	27.551
TUBB3	0	genome.wustl.edu	37	16	90001343	90001343	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	90001343	90001343	C	T	SNP	TUBB3	ENST00000315491	human	ensembl	74_37	+1	known	missense	c.484	p.R162C	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB3	Uniprot_gn	ENSG00000258947				143	0	0	129	38	22.7545
C16orf3	0	genome.wustl.edu	37	16	90095641	90095641	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	90095641	90095641	C	T	SNP	C16orf3	ENST00000408886	human	ensembl	74_37	-1	known	missense	c.110	p.C37Y	0.000	NULL	NULL	-	no_errors	C16orf3	HGNC	ENSG00000221819				85	0	0	76	21	21.6495
MYH13	0	genome.wustl.edu	37	17	10216027	10216027	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	10216027	10216027	G	A	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	missense	c.4229	p.T1410M	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788				41	0	0	25	11	30.5556
MYH4	0	genome.wustl.edu	37	17	10360811	10360811	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	10360811	10360811	A	G	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.1823	p.V608A	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424				87	0	0	105	33	23.913
TUSC5	0	genome.wustl.edu	37	17	1183346	1183346	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	1183346	1183346	C	T	SNP	TUSC5	ENST00000333813	human	ensembl	74_37	+1	known	silent	c.51	p.S17	0.005	NULL	pfam_CD225/Dispanin_fam	-	no_errors	TUSC5	HGNC	ENSG00000184811				111	0	0	129	31	19.375
YWHAE	0	genome.wustl.edu	37	17	1248762	1248762	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	1248762	1248762	G	A	SNP	YWHAE	ENST00000575977	human	ensembl	74_37	-1	putative	missense	c.296	p.T99M	1.000	pfam_14-3-3_domain,smart_14-3-3_domain,prints_14-3-3	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,prints_14-3-3	-	no_errors	YWHAE	HGNC	ENSG00000108953				274	0	0	251	71	22.0497
CRK	0	genome.wustl.edu	37	17	1359408	1359408	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	1359408	1359408	C	T	SNP	CRK	ENST00000300574	human	ensembl	74_37	-1	known	missense	c.4	p.A2T	1.000	NULL	pfam_SH3_2,pfam_SH2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH2,smart_SH3_domain,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	CRK	HGNC	ENSG00000167193				12	0	0	16	6	27.2727
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				102	0	0	158	18	10.2273
NCOR1	0	genome.wustl.edu	37	17	16075241	16075241	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	16075241	16075241	A	G	SNP	NCOR1	ENST00000268712	human	ensembl	74_37	-1	known	missense	c.311	p.L104P	1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027				57	0	0	58	17	22.6667
LLGL1	0	genome.wustl.edu	37	17	18140801	18140801	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	18140801	18140801	G	A	SNP	LLGL1	ENST00000316843	human	ensembl	74_37	+1	known	missense	c.1618	p.V540I	1.000	superfamily_WD40_repeat_dom,prints_Lethal2_giant	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL1	HGNC	ENSG00000131899				37	0	0	27	11	28.9474
SLC5A10	0	genome.wustl.edu	37	17	18880290	18880290	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	18880290	18880290	G	A	SNP	SLC5A10	ENST00000395647	human	ensembl	74_37	+1	known	missense	c.970	p.A324T	0.097	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A10	HGNC	ENSG00000154025				112	0	0	115	33	22.2973
ULK2	0	genome.wustl.edu	37	17	19685239	19685239	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	19685239	19685239	C	T	SNP	ULK2	ENST00000361658	human	ensembl	74_37	-1	known	missense	c.2602	p.V868M	1.000	pfam_Ser/Thr_kinase_C,pirsf_Ser/Thr_kin_STPK_Ulk-1/2	pfam_Prot_kinase_dom,pfam_Ser/Thr_kinase_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK2	HGNC	ENSG00000083290				112	0	0	109	22	16.7939
LGALS9B	0	genome.wustl.edu	37	17	20354922	20354922	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	20354922	20354922	C	T	SNP	LGALS9B	ENST00000423676	human	ensembl	74_37	-1	known	missense	c.796	p.A266T	1.000	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS9B	HGNC	ENSG00000170298				107	0	0	95	16	14.4144
LGALS9B	0	genome.wustl.edu	37	17	20356361	20356361	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	20356361	20356361	G	A	SNP	LGALS9B	ENST00000423676	human	ensembl	74_37	-1	known	missense	c.596	p.T199M	0.000	NULL	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS9B	HGNC	ENSG00000170298				269	0	0	193	74	27.7154
KIAA0100	0	genome.wustl.edu	37	17	26960634	26960634	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	26960634	26960634	C	T	SNP	KIAA0100	ENST00000528896	human	ensembl	74_37	-1	known	missense	c.3398	p.R1133H	1.000	pfam_FMP27_GFWDK_dom	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202				44	0	0	43	12	21.8182
FAM222B	0	genome.wustl.edu	37	17	27086787	27086787	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	27086787	27086787	T	C	SNP	FAM222B	ENST00000341217	human	ensembl	74_37	-1	known	missense	c.190	p.N64D	1.000	NULL	NULL	-	no_errors	FAM222B	HGNC	ENSG00000173065				30	0	0	30	3	9.09091
TP53I13	0	genome.wustl.edu	37	17	27899562	27899562	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	27899562	27899562	C	T	SNP	TP53I13	ENST00000301057	human	ensembl	74_37	+1	known	missense	c.916	p.R306C	1.000	NULL	NULL	-	no_errors	TP53I13	HGNC	ENSG00000167543				27	0	0	10	5	33.3333
NLE1	0	genome.wustl.edu	37	17	33464048	33464048	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	33464048	33464048	C	T	SNP	NLE1	ENST00000442241	human	ensembl	74_37	-1	known	missense	c.800	p.R267H	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_NLE,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep,prints_Gprotein_B	-	no_errors	NLE1	HGNC	ENSG00000073536				134	0	0	167	35	17.3267
AP2B1	0	genome.wustl.edu	37	17	33963434	33963434	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	33963434	33963434	A	G	SNP	AP2B1	ENST00000312678	human	ensembl	74_37	+1	known	silent	c.1230	p.A410	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,pfam_HEAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Armadillo,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP2B1	HGNC	ENSG00000006125				67	0	0	61	17	21.7949
TAF15	0	genome.wustl.edu	37	17	34171771	34171771	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	34171771	34171771	C	T	SNP	TAF15	ENST00000588240	human	ensembl	74_37	+1	known	nonsense	c.1468	p.R490*	0.996	NULL	pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	TAF15	HGNC	ENSG00000172660				43	0	0	41	9	18
MRM1	0	genome.wustl.edu	37	17	34964141	34964141	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	34964141	34964141	G	A	SNP	MRM1	ENST00000250156	human	ensembl	74_37	+1	known	silent	c.672	p.T224	0.999	pfam_SpoU_MeTrfase,tigrfam_rRNA_MeTrfase_TrmH	pfam_SpoU_MeTrfase,pfam_SpoU_subst-bd,smart_SpoU_subst-bd,tigrfam_rRNA_MeTrfase_TrmH	-	no_errors	MRM1	HGNC	ENSG00000129282				299	0	0	290	103	26.2087
CACNB1	0	genome.wustl.edu	37	17	37343783	37343783	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	37343783	37343783	C	T	SNP	CACNB1	ENST00000394303	human	ensembl	74_37	-1	known	silent	c.363	p.V121	1.000	superfamily_SH3_domain,pfscan_SH3_domain,prints_VDCC_L_b1su	pfam_GK/Ca_channel_bsu,pfam_VDCC_L_bsu,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_SH3_domain,prints_VDCC_L_bsu,prints_VDCC_L_b1su	-	no_errors	CACNB1	HGNC	ENSG00000067191				187	0	0	143	42	22.7027
PNMT	0	genome.wustl.edu	37	17	37826239	37826239	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	37826239	37826239	C	T	SNP	PNMT	ENST00000269582	human	ensembl	74_37	+1	known	missense	c.446	p.A149V	0.591	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	PNMT	HGNC	ENSG00000141744				86	0	0	79	17	17.7083
KRT20	0	genome.wustl.edu	37	17	39034577	39034577	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	39034577	39034577	C	T	SNP	KRT20	ENST00000167588	human	ensembl	74_37	-1	known	missense	c.959	p.R320H	0.920	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT20	HGNC	ENSG00000171431				88	0	0	141	27	16.0714
CCR10	0	genome.wustl.edu	37	17	40832446	40832446	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	40832446	40832446	C	T	SNP	CCR10	ENST00000332438	human	ensembl	74_37	-1	known	missense	c.214	p.A72T	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR10,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt	-	no_errors	CCR10	HGNC	ENSG00000184451				8	0	0	12	6	33.3333
CNTNAP1	0	genome.wustl.edu	37	17	40836173	40836173	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	40836173	40836173	G	A	SNP	CNTNAP1	ENST00000264638	human	ensembl	74_37	+1	known	missense	c.289	p.V97I	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797				327	0	0	303	94	23.6776
AOC4P	0	genome.wustl.edu	37	17	41019902	41019902	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	41019902	41019902	C	T	SNP	AOC4P	ENST00000562301	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AOC4P	HGNC	ENSG00000260105				57	0	0	62	14	18.4211
BRCA1	0	genome.wustl.edu	37	17	41244466	41244466	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	41244466	41244466	G	A	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	missense	c.3082	p.R1028C	0.867	pirsf_BRCA1	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048				164	0	0	245	59	19.4079
MPP2	0	genome.wustl.edu	37	17	41958160	41958160	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	41958160	41958160	C	T	SNP	MPP2	ENST00000461854	human	ensembl	74_37	-1	known	missense	c.1121	p.R374Q	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP2	HGNC	ENSG00000108852				81	0	0	119	32	21.1921
SLC4A1	0	genome.wustl.edu	37	17	42330716	42330716	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	42330716	42330716	C	T	SNP	SLC4A1	ENST00000262418	human	ensembl	74_37	-1	known	missense	c.2081	p.R694H	1.000	pfam_HCO3_transpt_C,prints_HCO3_transpt_euk,prints_Anion_exchange_1,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_1,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A1	HGNC	ENSG00000004939				88	0	0	65	19	22.619
FZD2	0	genome.wustl.edu	37	17	42636530	42636530	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	42636530	42636530	C	T	SNP	FZD2	ENST00000315323	human	ensembl	74_37	+1	known	missense	c.1474	p.R492C	1.000	pfam_Frizzled,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD2	HGNC	ENSG00000180340				47	0	0	50	13	20.6349
C1QL1	0	genome.wustl.edu	37	17	43037677	43037677	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	43037677	43037677	C	T	SNP	C1QL1	ENST00000253407	human	ensembl	74_37	-1	known	missense	c.656	p.S219N	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QL1	HGNC	ENSG00000131094				99	0	0	97	31	24.2188
PLCD3	0	genome.wustl.edu	37	17	43196290	43196290	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	43196290	43196290	C	T	SNP	PLCD3	ENST00000322765	human	ensembl	74_37	-1	known	missense	c.805	p.V269M	0.998	pfam_PLipase_C_EF-hand-like	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD3	HGNC	ENSG00000161714				31	0	0	29	9	23.6842
ARHGAP27	0	genome.wustl.edu	37	17	43474387	43474387	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	43474387	43474387	C	T	SNP	ARHGAP27	ENST00000428638	human	ensembl	74_37	-1	known	missense	c.1846	p.A616T	0.995	NULL	pfam_RhoGAP_dom,pfam_WW_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP27	HGNC	ENSG00000159314				71	0	0	62	12	16.2162
ENSG00000262905	0	genome.wustl.edu	37	17	456537	456537	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	456537	456537	C	T	SNP	ENSG00000262905	ENST00000574008	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP5-1029F21.2	Clone_based_vega_gene	ENSG00000262905				27	0	0	40	11	21.5686
HOXB4	0	genome.wustl.edu	37	17	46654330	46654330	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	46654330	46654330	C	T	SNP	HOXB4	ENST00000332503	human	ensembl	74_37	-1	known	silent	c.510	p.T170	0.991	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_antennapedia	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXB4	HGNC	ENSG00000182742				127	1	0.78125	145	51	26.0204
SPOP	0	genome.wustl.edu	37	17	47696653	47696653	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	47696653	47696653	G	A	SNP	SPOP	ENST00000347630	human	ensembl	74_37	-1	known	missense	c.295	p.R99W	1.000	pfam_MATH,superfamily_TRAF-like,smart_MATH,pfscan_MATH	pfam_BTB_POZ,pfam_MATH,superfamily_TRAF-like,superfamily_BTB/POZ_fold,smart_MATH,smart_BTB/POZ-like,pfscan_BTB/POZ-like,pfscan_MATH	-	no_errors	SPOP	HGNC	ENSG00000121067				139	0	0	146	41	21.9251
SPOP	0	genome.wustl.edu	37	17	47700149	47700149	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	47700149	47700149	T	C	SNP	SPOP	ENST00000347630	human	ensembl	74_37	-1	known	silent	c.24	p.P8	0.997	NULL	pfam_BTB_POZ,pfam_MATH,superfamily_TRAF-like,superfamily_BTB/POZ_fold,smart_MATH,smart_BTB/POZ-like,pfscan_BTB/POZ-like,pfscan_MATH	-	no_errors	SPOP	HGNC	ENSG00000121067				148	0	0	130	39	23.0769
SPATA20	0	genome.wustl.edu	37	17	48627597	48627597	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	48627597	48627597	A	G	SNP	SPATA20	ENST00000006658	human	ensembl	74_37	+1	known	missense	c.1022	p.Q341R	1.000	pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like	pfam_DUF255,pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like,superfamily_Thioredoxin-like_fold	-	no_errors	SPATA20	HGNC	ENSG00000006282				171	1	0.581395	147	34	18.7845
WFIKKN2	0	genome.wustl.edu	37	17	48917620	48917620	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	48917620	48917620	C	T	SNP	WFIKKN2	ENST00000311378	human	ensembl	74_37	+1	known	missense	c.971	p.P324L	1.000	superfamily_Prot_inh_Kunz-m	pfam_Prot_inh_Kunz-m,pfam_Ig_I-set,pfam_Netrin_module_non-TIMP,pfam_WAP-type_4-diS_core,pfam_Kazal_dom,pfam_Ig_V-set,superfamily_TIMP-like_OB-fold,superfamily_Prot_inh_Kunz-m,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Ig_sub,smart_Ig_sub2,smart_Prot_inh_Kunz-m,pfscan_Netrin_domain,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Prot_inh_Kunz-m	-	no_errors	WFIKKN2	HGNC	ENSG00000173714				62	0	0	79	24	23.301
SPAG9	0	genome.wustl.edu	37	17	49067155	49067155	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	49067155	49067155	G	A	SNP	SPAG9	ENST00000262013	human	ensembl	74_37	-1	known	missense	c.2696	p.A899V	1.000	superfamily_WD40_repeat_dom	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	SPAG9	HGNC	ENSG00000008294				211	1	0.471698	209	72	25.6228
SMG8	0	genome.wustl.edu	37	17	57288418	57288418	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	57288418	57288418	G	A	SNP	SMG8	ENST00000300917	human	ensembl	74_37	+1	known	missense	c.1006	p.V336M	1.000	pfam_Smg8/Smg9	pfam_Smg8/Smg9	-	no_errors	SMG8	HGNC	ENSG00000167447				92	0	0	86	21	19.6262
HEATR6	0	genome.wustl.edu	37	17	58121371	58121371	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	58121371	58121371	G	A	SNP	HEATR6	ENST00000184956	human	ensembl	74_37	-1	known	silent	c.3099	p.Y1033	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR6	HGNC	ENSG00000068097				203	0	0	187	76	28.8973
SCN4A	0	genome.wustl.edu	37	17	62036661	62036661	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	62036661	62036661	G	A	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	silent	c.1983	p.N661	0.359	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314				73	0	0	57	19	25
GEMIN4	0	genome.wustl.edu	37	17	649966	649966	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	649966	649966	G	T	SNP	GEMIN4	ENST00000319004	human	ensembl	74_37	-1	known	silent	c.1317	p.A439	0.811	NULL	NULL	-	no_errors	GEMIN4	HGNC	ENSG00000179409				81	0	0	77	20	20.6186
KIAA0753	0	genome.wustl.edu	37	17	6510238	6510238	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	6510238	6510238	A	C	SNP	KIAA0753	ENST00000361413	human	ensembl	74_37	-1	known	missense	c.1964	p.L655R	0.861	NULL	NULL	-	no_errors	KIAA0753	HGNC	ENSG00000198920				78	0	0	109	32	22.695
NOL11	0	genome.wustl.edu	37	17	65720282	65720282	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	65720282	65720282	C	T	SNP	NOL11	ENST00000253247	human	ensembl	74_37	+1	known	missense	c.637	p.R213W	0.780	pfam_NUC205	pfam_NUC205	-	no_errors	NOL11	HGNC	ENSG00000130935				49	0	0	43	8	15.6863
ABCA9	0	genome.wustl.edu	37	17	66982438	66982438	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	66982438	66982438	C	T	SNP	ABCA9	ENST00000340001	human	ensembl	74_37	-1	known	missense	c.4075	p.E1359K	0.002	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258				90	0	0	120	25	17.2414
SLC16A13	0	genome.wustl.edu	37	17	6940102	6940102	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	6940102	6940102	G	A	SNP	SLC16A13	ENST00000308027	human	ensembl	74_37	+1	known	missense	c.256	p.G86R	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Atg22-like,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A13	HGNC	ENSG00000174327				310	0	0	293	80	21.4477
DLG4	0	genome.wustl.edu	37	17	7095236	7095236	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	7095236	7095236	C	T	SNP	DLG4	ENST00000399510	human	ensembl	74_37	-1	known	missense	c.2081	p.R694H	1.000	pirsf_M-assoc_guanylate_kinase,pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pirsf_M-assoc_guanylate_kinase,pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_PDZ_assoc,pfam_MAGUK_PEST_N,pfam_SH3_domain,pfam_SH3_2,pfam_L27_1,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG4	HGNC	ENSG00000132535				104	0	0	78	29	27.1028
SSTR2	0	genome.wustl.edu	37	17	71166486	71166486	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	71166486	71166486	G	A	SNP	SSTR2	ENST00000357585	human	ensembl	74_37	+1	known	missense	c.1028	p.S343N	1.000	prints_Somatstn_rcpt_2,prints_Somatstn_rcpt_5	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_2,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Neuropept_B/W_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt,prints_Somatstn_rcpt_5	-	no_errors	SSTR2	HGNC	ENSG00000180616				85	0	0	95	44	31.6547
DVL2	0	genome.wustl.edu	37	17	7131322	7131322	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	7131322	7131322	G	T	SNP	DVL2	ENST00000005340	human	ensembl	74_37	-1	known	missense	c.1076	p.P359H	1.000	superfamily_PDZ	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_2,prints_Dishevelled_fam	-	no_errors	DVL2	HGNC	ENSG00000004975				64	0	0	61	11	15.2778
DVL2	0	genome.wustl.edu	37	17	7132917	7132917	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	7132917	7132917	C	T	SNP	DVL2	ENST00000005340	human	ensembl	74_37	-1	known	missense	c.737	p.R246H	1.000	superfamily_PDZ	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_2,prints_Dishevelled_fam	-	no_errors	DVL2	HGNC	ENSG00000004975				165	0	0	181	38	17.3516
TNK1	0	genome.wustl.edu	37	17	7287908	7287908	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	7287908	7287908	G	T	SNP	TNK1	ENST00000576812	human	ensembl	74_37	+1	known	missense	c.972	p.W324C	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TNK1	HGNC	ENSG00000174292				18	0	0	27	8	22.8571
SLC16A5	0	genome.wustl.edu	37	17	73096287	73096287	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	73096287	73096287	G	A	SNP	SLC16A5	ENST00000329783	human	ensembl	74_37	+1	known	missense	c.529	p.G177R	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A5	HGNC	ENSG00000170190				57	0	0	45	16	26.2295
NUP85	0	genome.wustl.edu	37	17	73230741	73230741	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	73230741	73230741	G	A	SNP	NUP85	ENST00000245544	human	ensembl	74_37	+1	known	missense	c.1625	p.R542H	1.000	pfam_Nucleoporin_Nup85	pfam_Nucleoporin_Nup85	-	no_errors	NUP85	HGNC	ENSG00000125450				266	0	0	284	74	20.6704
LLGL2	0	genome.wustl.edu	37	17	73539557	73539557	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	73539557	73539557	A	G	SNP	LLGL2	ENST00000392550	human	ensembl	74_37	+1	known	missense	c.50	p.K17R	1.000	prints_Lethal2_giant	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL2	HGNC	ENSG00000073350				129	0	0	115	37	24.3421
ITGB4	0	genome.wustl.edu	37	17	73723340	73723340	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	73723340	73723340	G	A	SNP	ITGB4	ENST00000200181	human	ensembl	74_37	+1	known	missense	c.145	p.A49T	0.988	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,prints_Integrin_bsu,pfscan_Fibronectin_type3	-	no_errors	ITGB4	HGNC	ENSG00000132470				36	0	0	45	19	29.6875
ITGB4	0	genome.wustl.edu	37	17	73733432	73733432	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	73733432	73733432	C	T	SNP	ITGB4	ENST00000200181	human	ensembl	74_37	+1	known	missense	c.2020	p.R674W	1.000	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_tail,superfamily_Integrin_bsu_tail	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,prints_Integrin_bsu,pfscan_Fibronectin_type3	-	no_errors	ITGB4	HGNC	ENSG00000132470				13	0	0	8	3	27.2727
JMJD6	0	genome.wustl.edu	37	17	74719969	74719969	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	74719969	74719969	G	A	SNP	JMJD6	ENST00000445478	human	ensembl	74_37	-1	known	silent	c.690	p.D230	0.990	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD6	HGNC	ENSG00000070495				190	0	0	150	60	28.5714
DNAH17	0	genome.wustl.edu	37	17	76503643	76503643	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	76503643	76503643	C	T	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.4469	p.R1490Q	0.998	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775				49	0	0	48	17	26.1538
KDM6B	0	genome.wustl.edu	37	17	7749498	7749498	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	7749498	7749498	T	C	SNP	KDM6B	ENST00000254846	human	ensembl	74_37	+1	known	silent	c.339	p.L113	0.992	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM6B	HGNC	ENSG00000132510				55	0	0	46	14	23.3333
CBX8	0	genome.wustl.edu	37	17	77770056	77770056	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	77770056	77770056	C	G	SNP	CBX8	ENST00000269385	human	ensembl	74_37	-1	known	missense	c.172	p.E58Q	1.000	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CBX8	HGNC	ENSG00000141570				287	0	0	267	53	16.5625
AZI1	0	genome.wustl.edu	37	17	79173615	79173615	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	79173615	79173615	G	A	SNP	AZI1	ENST00000269392	human	ensembl	74_37	-1	known	silent	c.927	p.G309	0.006	NULL	superfamily_t-SNARE	-	no_errors	AZI1	HGNC	ENSG00000141577				158	0	0	149	38	20.3209
ALOX12B	0	genome.wustl.edu	37	17	7976509	7976509	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	7976509	7976509	G	A	SNP	ALOX12B	ENST00000319144	human	ensembl	74_37	-1	known	missense	c.1883	p.T628M	0.002	pfam_LipOase_C,superfamily_LipOase_C,prints_LipOase_mml	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477				291	0	0	274	107	28.084
ALOX12B	0	genome.wustl.edu	37	17	7980427	7980427	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	7980427	7980427	G	A	SNP	ALOX12B	ENST00000319144	human	ensembl	74_37	-1	known	missense	c.1156	p.R386C	0.992	pfam_LipOase_C,superfamily_LipOase_C,prints_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477				22	0	0	30	10	25
TBCD	0	genome.wustl.edu	37	17	80863898	80863898	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	80863898	80863898	G	A	SNP	TBCD	ENST00000355528	human	ensembl	74_37	+1	known	missense	c.1891	p.A631T	0.127	superfamily_ARM-type_fold	pfam_Tubulin_specific_chaperoneD_C,superfamily_ARM-type_fold	-	no_errors	TBCD	HGNC	ENSG00000141556				22	0	0	24	11	31.4286
METRNL	0	genome.wustl.edu	37	17	81052065	81052065	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	81052065	81052065	G	A	SNP	METRNL	ENST00000320095	human	ensembl	74_37	+1	known	silent	c.681	p.L227	0.547	NULL	NULL	-	no_errors	METRNL	HGNC	ENSG00000176845				119	0	0	95	28	22.7642
MYH10	0	genome.wustl.edu	37	17	8409646	8409646	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	8409646	8409646	C	T	SNP	MYH10	ENST00000396239	human	ensembl	74_37	-1	known	missense	c.3346	p.A1116T	1.000	pfam_Myosin_tail,superfamily_HR1_rho-bd	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026				111	1	0.892857	113	37	24.6667
MFSD6L	0	genome.wustl.edu	37	17	8701914	8701914	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	8701914	8701914	G	A	SNP	MFSD6L	ENST00000329805	human	ensembl	74_37	-1	known	silent	c.525	p.S175	0.000	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD6L	HGNC	ENSG00000185156				144	0	0	143	35	19.6629
GLP2R	0	genome.wustl.edu	37	17	9760756	9760756	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	9760756	9760756	C	T	SNP	GLP2R	ENST00000262441	human	ensembl	74_37	+1	known	missense	c.628	p.R210C	0.991	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GLP2R	HGNC	ENSG00000065325				73	0	0	64	19	22.8916
RIOK3	0	genome.wustl.edu	37	18	21056996	21056996	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	21056996	21056996	T	C	SNP	RIOK3	ENST00000339486	human	ensembl	74_37	+1	known	silent	c.1200	p.C400	0.871	pfam_RIO-like_kinase,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_RIO_kinase,pirsf_Ser/Thr_kinase_Rio3	pfam_RIO-like_kinase,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_RIO_kinase,pirsf_Ser/Thr_kinase_Rio3	-	no_errors	RIOK3	HGNC	ENSG00000101782				56	0	0	54	12	18.1818
NPC1	0	genome.wustl.edu	37	18	21112182	21112182	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	21112182	21112182	C	T	SNP	NPC1	ENST00000269228	human	ensembl	74_37	-1	known	missense	c.3821	p.R1274Q	0.988	NULL	pfam_Patched,pfam_MMPL_dom,pfscan_SSD,tigrfam_NP_C_type	-	no_errors	NPC1	HGNC	ENSG00000141458				195	0	0	216	58	21.1679
DSC3	0	genome.wustl.edu	37	18	28612232	28612232	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	28612232	28612232	C	T	SNP	DSC3	ENST00000360428	human	ensembl	74_37	-1	known	missense	c.80	p.R27H	0.196	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin,prints_Desmosomal_cadherin	-	no_errors	DSC3	HGNC	ENSG00000134762				72	0	0	85	26	23.4234
KLHL14	0	genome.wustl.edu	37	18	30275442	30275442	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	30275442	30275442	G	A	SNP	KLHL14	ENST00000359358	human	ensembl	74_37	-1	known	silent	c.1143	p.D381	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL14	HGNC	ENSG00000197705				32	0	0	53	13	19.697
ASXL3	0	genome.wustl.edu	37	18	31323088	31323088	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	31323088	31323088	G	T	SNP	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	missense	c.3276	p.E1092D	0.934	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431				51	0	0	64	16	20
MOCOS	0	genome.wustl.edu	37	18	33836881	33836881	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	33836881	33836881	C	T	SNP	MOCOS	ENST00000588132	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	MOCOS	HGNC	ENSG00000075643				117	0	0	150	41	21.466
SLC14A2	0	genome.wustl.edu	37	18	43262376	43262376	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	43262376	43262376	G	A	SNP	SLC14A2	ENST00000255226	human	ensembl	74_37	+1	known	silent	c.2655	p.P885	0.011	NULL	pfam_Urea_transporter	-	no_errors	SLC14A2	HGNC	ENSG00000132874				280	0	0	292	136	31.7757
EPG5	0	genome.wustl.edu	37	18	43446800	43446800	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	43446800	43446800	G	A	SNP	EPG5	ENST00000282041	human	ensembl	74_37	-1	known	missense	c.6584	p.A2195V	1.000	NULL	NULL	-	no_errors	EPG5	HGNC	ENSG00000152223				251	0	0	313	82	20.7595
TCEB3CL2	0	genome.wustl.edu	37	18	44543289	44543289	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	44543289	44543289	C	T	SNP	TCEB3CL2	ENST00000591973	human	ensembl	74_37	-1	known	silent	c.1083	p.S361	0.001	pfam_RNA_pol_II_trans_fac_SIII_A	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3CL2	HGNC	ENSG00000266996				524	0	0	614	65	9.5729
TCEB3B	0	genome.wustl.edu	37	18	44561181	44561181	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	44561181	44561181	C	A	SNP	TCEB3B	ENST00000332567	human	ensembl	74_37	-1	known	missense	c.455	p.R152I	0.001	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3B	HGNC	ENSG00000206181				166	1	0.598802	150	55	26.8293
MYO5B	0	genome.wustl.edu	37	18	47390531	47390531	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	47390531	47390531	G	A	SNP	MYO5B	ENST00000285039	human	ensembl	74_37	-1	known	nonsense	c.3823	p.R1275*	0.382	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306				64	0	0	80	28	25.9259
CCDC11	0	genome.wustl.edu	37	18	47778135	47778135	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	47778135	47778135	G	A	SNP	CCDC11	ENST00000398545	human	ensembl	74_37	-1	known	missense	c.493	p.R165C	1.000	NULL	NULL	-	no_errors	CCDC11	HGNC	ENSG00000172361				314	0	0	312	124	28.4404
ALPK2	0	genome.wustl.edu	37	18	56204716	56204716	+	Silent	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	56204716	56204716	T	G	SNP	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	silent	c.2703	p.T901	0.001	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796				54	0	0	72	23	24.2105
CPLX4	0	genome.wustl.edu	37	18	56963955	56963955	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	56963955	56963955	G	A	SNP	CPLX4	ENST00000299721	human	ensembl	74_37	-1	known	missense	c.458	p.A153V	1.000	NULL	pfam_Synaphin	-	no_errors	CPLX4	HGNC	ENSG00000166569				41	0	0	63	29	31.5217
CDH20	0	genome.wustl.edu	37	18	59221671	59221671	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	59221671	59221671	G	A	SNP	CDH20	ENST00000262717	human	ensembl	74_37	+1	known	missense	c.2149	p.A717T	0.715	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH20	HGNC	ENSG00000101542				29	0	0	55	20	26.6667
PHLPP1	0	genome.wustl.edu	37	18	60646006	60646006	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	60646006	60646006	C	T	SNP	PHLPP1	ENST00000262719	human	ensembl	74_37	+1	known	missense	c.4496	p.P1499L	1.000	NULL	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom,pfscan_Pleckstrin_homology	-	no_errors	PHLPP1	HGNC	ENSG00000081913				26	0	0	25	7	21.875
SOCS6	0	genome.wustl.edu	37	18	67992102	67992102	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	67992102	67992102	C	T	SNP	SOCS6	ENST00000397942	human	ensembl	74_37	+1	known	silent	c.198	p.N66	0.000	NULL	pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS6	HGNC	ENSG00000170677				137	0	0	124	28	18.4211
SALL3	0	genome.wustl.edu	37	18	76752289	76752289	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	76752289	76752289	G	A	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.298	p.A100T	0.930	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				14	0	0	17	6	26.087
ATP9B	0	genome.wustl.edu	37	18	77067118	77067118	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	77067118	77067118	A	G	SNP	ATP9B	ENST00000426216	human	ensembl	74_37	+1	known	missense	c.1657	p.N553D	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9B	HGNC	ENSG00000166377				142	0	0	131	37	22.0238
CTDP1	0	genome.wustl.edu	37	18	77477825	77477825	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	77477825	77477825	G	A	SNP	CTDP1	ENST00000299543	human	ensembl	74_37	+1	known	silent	c.2226	p.A742	0.001	pfam_FCP1_C	pfam_FCP1_C,pfam_NIF,superfamily_HAD-like_dom,superfamily_BRCT_dom,superfamily_Single_hybrid_motif,smart_NIF,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_NIF,tigrfam_FCP1_euk	-	no_errors	CTDP1	HGNC	ENSG00000060069				95	0	0	108	7	6.08696
PTPRM	0	genome.wustl.edu	37	18	8379271	8379271	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	8379271	8379271	G	T	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	missense	c.3722	p.R1241L	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482				109	0	0	100	19	15.9664
COL5A3	0	genome.wustl.edu	37	19	10076989	10076989	+	Splice_Site	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	10076989	10076989	C	T	SNP	COL5A3	ENST00000264828	human	ensembl	74_37	-1	known	splice_site	c.4782+1	e64+1	0.999	-	-	-	no_errors	COL5A3	HGNC	ENSG00000080573				72	0	0	79	9	10.2273
ABCA7	0	genome.wustl.edu	37	19	1048922	1048922	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	1048922	1048922	T	A	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	missense	c.2298	p.N766K	0.999	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687				24	0	0	14	6	30
ILF3	0	genome.wustl.edu	37	19	10793817	10793817	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	10793817	10793817	G	T	SNP	ILF3	ENST00000449870	human	ensembl	74_37	+1	known	missense	c.1565	p.G522V	1.000	NULL	pfam_DZF,pfam_dsRNA-bd_dom,smart_DZF,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	ILF3	HGNC	ENSG00000129351				173	0	0	89	79	47.0238
ILF3	0	genome.wustl.edu	37	19	10798154	10798154	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	10798154	10798154	C	A	SNP	ILF3	ENST00000449870	human	ensembl	74_37	+1	known	missense	c.2204	p.A735D	0.029	NULL	pfam_DZF,pfam_dsRNA-bd_dom,smart_DZF,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	ILF3	HGNC	ENSG00000129351				27	0	0	26	18	40.9091
HMHA1	0	genome.wustl.edu	37	19	1085684	1085684	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	1085684	1085684	G	A	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	silent	c.3090	p.S1030	0.004	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448				16	0	0	8	8	50
C19orf80	0	genome.wustl.edu	37	19	11350389	11350389	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	11350389	11350389	G	A	SNP	C19orf80	ENST00000252453	human	ensembl	74_37	+1	known	missense	c.76	p.G26S	0.000	NULL	NULL	-	no_errors	C19orf80	HGNC	ENSG00000130173				51	0	0	29	24	45.283
ZNF440	0	genome.wustl.edu	37	19	11943257	11943257	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	11943257	11943257	A	G	SNP	ZNF440	ENST00000304060	human	ensembl	74_37	+1	known	silent	c.1266	p.K422	0.987	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF440	HGNC	ENSG00000171295				100	0	0	186	33	15.0685
ZNF440	0	genome.wustl.edu	37	19	11943260	11943260	+	Silent	SNP	G	G	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	11943260	11943260	G	C	SNP	ZNF440	ENST00000304060	human	ensembl	74_37	+1	known	silent	c.1269	p.P423	0.026	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF440	HGNC	ENSG00000171295				99	0	0	168	34	16.8317
ZNF440	0	genome.wustl.edu	37	19	11943270	11943270	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	11943270	11943270	A	C	SNP	ZNF440	ENST00000304060	human	ensembl	74_37	+1	known	missense	c.1279	p.K427Q	0.075	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF440	HGNC	ENSG00000171295				91	0	0	169	33	16.3366
ZNF440	0	genome.wustl.edu	37	19	11943295	11943295	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	11943295	11943295	A	C	SNP	ZNF440	ENST00000304060	human	ensembl	74_37	+1	known	missense	c.1304	p.Y435S	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF440	HGNC	ENSG00000171295				74	0	0	164	32	16.3265
ZNF440	0	genome.wustl.edu	37	19	11943375	11943375	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	11943375	11943375	A	C	SNP	ZNF440	ENST00000304060	human	ensembl	74_37	+1	known	missense	c.1384	p.I462L	0.005	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF440	HGNC	ENSG00000171295				80	0	0	117	8	6.4
ZNF69	0	genome.wustl.edu	37	19	12016354	12016354	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	12016354	12016354	C	T	SNP	ZNF69	ENST00000429654	human	ensembl	74_37	+1	known	missense	c.1142	p.T381I	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429				79	0	0	56	56	50
ZNF69	0	genome.wustl.edu	37	19	12016481	12016481	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	12016481	12016481	G	A	SNP	ZNF69	ENST00000429654	human	ensembl	74_37	+1	known	silent	c.1269	p.K423	0.245	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429				77	0	0	77	26	25.2427
ZNF69	0	genome.wustl.edu	37	19	12016494	12016494	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	12016494	12016494	T	G	SNP	ZNF69	ENST00000429654	human	ensembl	74_37	+1	known	missense	c.1282	p.S428A	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429				78	0	0	82	29	26.1261
ZNF69	0	genome.wustl.edu	37	19	12016507	12016507	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	12016507	12016507	A	G	SNP	ZNF69	ENST00000429654	human	ensembl	74_37	+1	known	missense	c.1295	p.Q432R	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429				81	0	0	78	30	27.7778
ZNF69	0	genome.wustl.edu	37	19	12016509	12016509	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	12016509	12016509	T	G	SNP	ZNF69	ENST00000429654	human	ensembl	74_37	+1	known	missense	c.1297	p.L433V	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429				81	0	0	75	30	28.5714
ZNF69	0	genome.wustl.edu	37	19	12016578	12016578	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	12016578	12016578	A	G	SNP	ZNF69	ENST00000429654	human	ensembl	74_37	+1	known	missense	c.1366	p.M456V	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429				68	0	0	78	45	36.5854
ZNF69	0	genome.wustl.edu	37	19	12016583	12016583	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	12016583	12016583	G	T	SNP	ZNF69	ENST00000429654	human	ensembl	74_37	+1	known	missense	c.1371	p.K457N	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429				65	0	0	77	48	38.4
ZNF69	0	genome.wustl.edu	37	19	12016642	12016642	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	12016642	12016642	C	G	SNP	ZNF69	ENST00000429654	human	ensembl	74_37	+1	known	missense	c.1430	p.P477R	0.858	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429				58	0	0	61	44	41.9048
IER2	0	genome.wustl.edu	37	19	13264528	13264528	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	13264528	13264528	C	T	SNP	IER2	ENST00000292433	human	ensembl	74_37	+1	known	silent	c.528	p.R176	0.985	pfam_IER	pfam_IER	-	no_errors	IER2	HGNC	ENSG00000160888				39	0	0	22	26	54.1667
APC2	0	genome.wustl.edu	37	19	1455462	1455462	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	1455462	1455462	G	A	SNP	APC2	ENST00000233607	human	ensembl	74_37	+1	known	missense	c.602	p.R201H	1.000	pfam_APC_dom	pfam_APC_basic_dom,pfam_APC_dom,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Armadillo	-	no_errors	APC2	HGNC	ENSG00000115266				10	0	0	0	11	100
NOTCH3	0	genome.wustl.edu	37	19	15302604	15302604	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	15302604	15302604	C	T	SNP	NOTCH3	ENST00000263388	human	ensembl	74_37	-1	known	missense	c.754	p.V252M	1.000	pirsf_Notch,pfam_EG-like_dom,pfam_EGF_extracell,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_3,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181				59	0	0	32	40	55.5556
ZNF100	0	genome.wustl.edu	37	19	21909815	21909815	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	21909815	21909815	T	C	SNP	ZNF100	ENST00000358296	human	ensembl	74_37	-1	known	silent	c.1299	p.E433	0.300	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF100	HGNC	ENSG00000197020				166	0	0	276	29	9.5082
URI1	0	genome.wustl.edu	37	19	30505891	30505891	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	30505891	30505891	G	A	SNP	URI1	ENST00000542441	human	ensembl	74_37	+1	known	missense	c.1523	p.R508Q	0.998	NULL	pfam_Prefoldin_subunit_alpha,superfamily_Prefoldin	-	no_errors	URI1	HGNC	ENSG00000105176				191	0	0	275	95	25.6757
PEPD	0	genome.wustl.edu	37	19	33968993	33968993	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	33968993	33968993	G	A	SNP	PEPD	ENST00000244137	human	ensembl	74_37	-1	known	silent	c.507	p.F169	0.995	NULL	pfam_Pept_M24_structural-domain,pfam_Aminopep_P_N,superfamily_Pept_M24_structural-domain	-	no_errors	PEPD	HGNC	ENSG00000124299				21	0	0	15	4	21.0526
PEPD	0	genome.wustl.edu	37	19	33980958	33980958	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	33980958	33980958	G	A	SNP	PEPD	ENST00000244137	human	ensembl	74_37	-1	known	silent	c.447	p.G149	0.828	pfam_Aminopep_P_N	pfam_Pept_M24_structural-domain,pfam_Aminopep_P_N,superfamily_Pept_M24_structural-domain	-	no_errors	PEPD	HGNC	ENSG00000124299				22	0	0	24	13	35.1351
MAG	0	genome.wustl.edu	37	19	35801452	35801452	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	35801452	35801452	C	T	SNP	MAG	ENST00000392213	human	ensembl	74_37	+1	known	nonsense	c.1522	p.R508*	0.991	NULL	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MAG	HGNC	ENSG00000105695				67	0	0	68	17	20
FFAR1	0	genome.wustl.edu	37	19	35842942	35842942	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	35842942	35842942	C	T	SNP	FFAR1	ENST00000246553	human	ensembl	74_37	+1	known	missense	c.488	p.P163L	0.013	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR40_recept_FA	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR40_recept_FA,prints_GPR40-rel_orph,prints_GPCR_Rhodpsn	-	no_errors	FFAR1	HGNC	ENSG00000126266				90	0	0	79	21	21
KMT2B	0	genome.wustl.edu	37	19	36229028	36229028	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	36229028	36229028	A	C	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	missense	c.7808	p.E2603A	1.000	pirsf_MeTrfase_trithorax,pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				64	0	0	47	15	24.1935
LRFN3	0	genome.wustl.edu	37	19	36430659	36430659	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	36430659	36430659	C	T	SNP	LRFN3	ENST00000246529	human	ensembl	74_37	+1	known	missense	c.332	p.A111V	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN3	HGNC	ENSG00000126243				47	0	0	35	17	32.6923
ZNF461	0	genome.wustl.edu	37	19	37130820	37130820	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	37130820	37130820	C	T	SNP	ZNF461	ENST00000588268	human	ensembl	74_37	-1	known	missense	c.427	p.A143T	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF461	HGNC	ENSG00000197808				336	0	0	317	78	19.7468
ZNF793	0	genome.wustl.edu	37	19	38027882	38027882	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	38027882	38027882	T	A	SNP	ZNF793	ENST00000445217	human	ensembl	74_37	+1	known	missense	c.322	p.L108M	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF793	HGNC	ENSG00000188227				56	0	0	36	13	26.5306
SPINT2	0	genome.wustl.edu	37	19	38780920	38780920	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	38780920	38780920	C	T	SNP	SPINT2	ENST00000301244	human	ensembl	74_37	+1	known	missense	c.553	p.R185C	0.877	NULL	pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	SPINT2	HGNC	ENSG00000167642				23	0	0	38	12	24
RYR1	0	genome.wustl.edu	37	19	38980003	38980003	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	38980003	38980003	G	T	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	nonsense	c.5734	p.E1912*	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				99	0	0	91	24	20.8696
LRFN1	0	genome.wustl.edu	37	19	39805733	39805733	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	39805733	39805733	G	A	SNP	LRFN1	ENST00000248668	human	ensembl	74_37	-1	known	missense	c.244	p.R82C	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN1	HGNC	ENSG00000128011				12	0	0	4	4	50
SUPT5H	0	genome.wustl.edu	37	19	39961140	39961140	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	39961140	39961140	C	T	SNP	SUPT5H	ENST00000432763	human	ensembl	74_37	+1	known	nonsense	c.1654	p.R552*	1.000	pirsf_TF_Spt5	pfam_TF_Spt5_NGN-domain,pfam_KOW,pfam_Spt5_N,superfamily_Translation_prot_SH3-like,smart_Transcrpt_antiterm_NusG_N_dom,smart_KOW,pirsf_TF_Spt5	-	no_errors	SUPT5H	HGNC	ENSG00000196235				346	0	0	313	91	22.5248
DLL3	0	genome.wustl.edu	37	19	39995921	39995921	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	39995921	39995921	G	A	SNP	DLL3	ENST00000205143	human	ensembl	74_37	+1	known	missense	c.923	p.R308Q	0.986	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DLL3	HGNC	ENSG00000090932				148	1	0.671141	167	49	22.6852
FCGBP	0	genome.wustl.edu	37	19	40384036	40384036	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	40384036	40384036	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.9574	p.A3192T	0.000	pfam_TIL_dom,superfamily_TIL_dom,smart_EG-like_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920				156	0	0	170	12	6.59341
MAP3K10	0	genome.wustl.edu	37	19	40710471	40710471	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	40710471	40710471	G	A	SNP	MAP3K10	ENST00000253055	human	ensembl	74_37	+1	known	missense	c.943	p.V315M	1.000	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K10	HGNC	ENSG00000130758				81	0	0	100	14	12.2807
HIPK4	0	genome.wustl.edu	37	19	40887032	40887032	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	40887032	40887032	T	C	SNP	HIPK4	ENST00000291823	human	ensembl	74_37	-1	known	missense	c.866	p.D289G	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK4	HGNC	ENSG00000160396				73	0	0	98	6	5.76923
PRX	0	genome.wustl.edu	37	19	40901531	40901531	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	40901531	40901531	C	T	SNP	PRX	ENST00000324001	human	ensembl	74_37	-1	known	missense	c.2728	p.A910T	0.190	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PRX	HGNC	ENSG00000105227				111	0	0	117	34	22.5166
SHKBP1	0	genome.wustl.edu	37	19	41094670	41094670	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	41094670	41094670	G	A	SNP	SHKBP1	ENST00000291842	human	ensembl	74_37	+1	known	missense	c.1477	p.A493T	1.000	superfamily_WD40_repeat_dom	pfam_T1-type_BTB,pfam_WD40_repeat,superfamily_BTB/POZ_fold,superfamily_WD40_repeat_dom,smart_BTB/POZ-like,smart_WD40_repeat,pfscan_BTB/POZ-like	-	no_errors	SHKBP1	HGNC	ENSG00000160410				47	0	0	47	19	28.7879
HNRNPUL1	0	genome.wustl.edu	37	19	41782099	41782099	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	41782099	41782099	C	T	SNP	HNRNPUL1	ENST00000392006	human	ensembl	74_37	+1	known	missense	c.682	p.R228W	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_SAP_dom,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323				169	0	0	196	47	19.3416
B3GNT8	0	genome.wustl.edu	37	19	41931674	41931674	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	41931674	41931674	G	A	SNP	B3GNT8	ENST00000321702	human	ensembl	74_37	-1	known	missense	c.1010	p.T337I	0.949	pfam_Glyco_trans_31	pfam_Glyco_trans_31	-	no_errors	B3GNT8	HGNC	ENSG00000177191				95	0	0	126	32	20.2532
SHC2	0	genome.wustl.edu	37	19	422256	422256	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	422256	422256	C	T	SNP	SHC2	ENST00000264554	human	ensembl	74_37	-1	known	missense	c.1510	p.D504N	0.999	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_PTB/PI_dom,pfam_SH2,smart_PTB/PI_dom,smart_SH2,pfscan_PTB/PI_dom,pfscan_SH2,prints_PID_Shc-like,prints_SH2	-	no_errors	SHC2	HGNC	ENSG00000129946				23	0	0	17	19	52.7778
ATP1A3	0	genome.wustl.edu	37	19	42486241	42486241	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	42486241	42486241	G	A	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	silent	c.1011	p.T337	0.001	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A3	HGNC	ENSG00000105409				223	0	0	185	60	24.4898
CEACAM1	0	genome.wustl.edu	37	19	43023168	43023168	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	43023168	43023168	G	A	SNP	CEACAM1	ENST00000161559	human	ensembl	74_37	-1	known	missense	c.1178	p.T393M	0.000	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM1	HGNC	ENSG00000079385				136	0	0	145	51	26.0204
PSG3	0	genome.wustl.edu	37	19	43233450	43233450	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	43233450	43233450	C	T	SNP	PSG3	ENST00000327495	human	ensembl	74_37	-1	known	silent	c.1068	p.A356	0.001	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG3	HGNC	ENSG00000221826				268	0	0	335	105	23.8636
CLASRP	0	genome.wustl.edu	37	19	45556099	45556099	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	45556099	45556099	G	A	SNP	CLASRP	ENST00000221455	human	ensembl	74_37	+1	known	missense	c.248	p.R83H	0.987	pfam_SWAP_N_domain	pfam_SWAP_N_domain	-	no_errors	CLASRP	HGNC	ENSG00000104859				84	0	0	103	33	24.2647
ERCC2	0	genome.wustl.edu	37	19	45867584	45867584	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	45867584	45867584	C	T	SNP	ERCC2	ENST00000391945	human	ensembl	74_37	-1	known	missense	c.724	p.V242I	1.000	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DUF1227,pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,prints_XPGD_DNA_repair,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	ERCC2	HGNC	ENSG00000104884				49	0	0	47	14	22.9508
FBXO46	0	genome.wustl.edu	37	19	46215641	46215641	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	46215641	46215641	C	T	SNP	FBXO46	ENST00000317683	human	ensembl	74_37	-1	known	silent	c.1113	p.T371	0.027	NULL	superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO46	HGNC	ENSG00000177051				71	0	0	72	30	29.4118
FBXO46	0	genome.wustl.edu	37	19	46215859	46215859	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	46215859	46215859	G	T	SNP	FBXO46	ENST00000317683	human	ensembl	74_37	-1	known	silent	c.895	p.R299	0.824	NULL	superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO46	HGNC	ENSG00000177051				13	0	0	17	13	43.3333
RSPH6A	0	genome.wustl.edu	37	19	46314009	46314009	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	46314009	46314009	G	A	SNP	RSPH6A	ENST00000221538	human	ensembl	74_37	-1	known	missense	c.740	p.T247M	0.363	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH6A	HGNC	ENSG00000104941				77	0	0	91	26	22.2222
CCDC8	0	genome.wustl.edu	37	19	46915101	46915101	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	46915101	46915101	C	G	SNP	CCDC8	ENST00000307522	human	ensembl	74_37	-1	known	missense	c.967	p.A323P	0.016	NULL	NULL	-	no_errors	CCDC8	HGNC	ENSG00000169515				257	2	0.772201	264	76	22.3529
PNMAL1	0	genome.wustl.edu	37	19	46973245	46973245	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	46973245	46973245	C	T	SNP	PNMAL1	ENST00000313683	human	ensembl	74_37	-1	known	missense	c.1048	p.V350M	0.005	NULL	NULL	-	no_errors	PNMAL1	HGNC	ENSG00000182013				463	0	0	437	140	24.2634
BBC3	0	genome.wustl.edu	37	19	47725009	47725009	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	47725009	47725009	G	A	SNP	BBC3	ENST00000449228	human	ensembl	74_37	-1	known	silent	c.735	p.L245	0.991	NULL	NULL	-	no_errors	BBC3	HGNC	ENSG00000105327				25	0	0	25	7	21.875
GLTSCR1	0	genome.wustl.edu	37	19	48201924	48201924	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	48201924	48201924	C	T	SNP	GLTSCR1	ENST00000396720	human	ensembl	74_37	+1	known	silent	c.3282	p.S1094	0.919	NULL	NULL	-	no_errors	GLTSCR1	HGNC	ENSG00000063169				76	0	0	67	17	20.2381
PLEKHA4	0	genome.wustl.edu	37	19	49340665	49340665	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	49340665	49340665	G	A	SNP	PLEKHA4	ENST00000263265	human	ensembl	74_37	-1	known	missense	c.2221	p.R741C	0.044	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA4	HGNC	ENSG00000105559				75	0	0	51	26	33.7662
NUCB1	0	genome.wustl.edu	37	19	49404120	49404120	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	49404120	49404120	G	A	SNP	NUCB1	ENST00000263273	human	ensembl	74_37	+1	known	missense	c.67	p.A23T	0.010	NULL	pfscan_EF_hand_dom	-	no_errors	NUCB1	HGNC	ENSG00000104805				78	0	0	71	30	29.703
DHDH	0	genome.wustl.edu	37	19	49439393	49439393	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	49439393	49439393	G	A	SNP	DHDH	ENST00000221403	human	ensembl	74_37	+1	known	missense	c.307	p.A103T	0.035	pfam_Oxidoreductase_N	pfam_Oxidoreductase_N	-	no_errors	DHDH	HGNC	ENSG00000104808				34	0	0	21	3	12.5
NUP62	0	genome.wustl.edu	37	19	50412220	50412220	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	50412220	50412220	G	C	SNP	NUP62	ENST00000352066	human	ensembl	74_37	-1	known	missense	c.845	p.T282S	0.021	NULL	pfam_Nucleoporin_NSP1_C	-	no_errors	NUP62	HGNC	ENSG00000213024				69	0	0	75	27	26.4706
ENSG00000269388	0	genome.wustl.edu	37	19	52104519	52104519	+	RNA	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	52104519	52104519	C	A	SNP	ENSG00000269388	ENST00000598755	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC018755.16	Clone_based_vega_gene	ENSG00000269388				11	0	0	12	6	33.3333
SIGLEC5	0	genome.wustl.edu	37	19	52115550	52115550	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	52115550	52115550	C	T	SNP	SIGLEC5	ENST00000222107	human	ensembl	74_37	-1	known	silent	c.1590	p.S530	0.000	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC5	HGNC	ENSG00000105501				156	0	0	205	68	24.9084
ZNF616	0	genome.wustl.edu	37	19	52618938	52618938	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	52618938	52618938	G	A	SNP	ZNF616	ENST00000600228	human	ensembl	74_37	-1	known	silent	c.1479	p.Y493	0.064	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF616	HGNC	ENSG00000204611				124	0	0	165	28	14.5078
ZNF616	0	genome.wustl.edu	37	19	52618943	52618943	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	52618943	52618943	G	C	SNP	ZNF616	ENST00000600228	human	ensembl	74_37	-1	known	missense	c.1474	p.P492A	0.566	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF616	HGNC	ENSG00000204611				119	0	0	158	18	10.2273
ZNF616	0	genome.wustl.edu	37	19	52619001	52619001	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	52619001	52619001	T	C	SNP	ZNF616	ENST00000600228	human	ensembl	74_37	-1	known	silent	c.1416	p.K472	0.180	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF616	HGNC	ENSG00000204611				110	0	0	169	10	5.58659
ZNF880	0	genome.wustl.edu	37	19	52888041	52888041	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	52888041	52888041	C	T	SNP	ZNF880	ENST00000422689	human	ensembl	74_37	+1	known	missense	c.1208	p.T403M	0.994	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF880	HGNC	ENSG00000221923				45	0	0	35	15	30
LILRB2	0	genome.wustl.edu	37	19	54783692	54783692	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	54783692	54783692	G	A	SNP	LILRB2	ENST00000391749	human	ensembl	74_37	-1	known	silent	c.309	p.R103	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB2	HGNC	ENSG00000131042				161	0	0	176	51	22.467
KIR3DX1	0	genome.wustl.edu	37	19	55046705	55046705	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	55046705	55046705	C	T	SNP	KIR3DX1	ENST00000482404	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KIR3DX1	HGNC	ENSG00000104970				44	0	0	31	8	20.5128
LILRB4	0	genome.wustl.edu	37	19	55177749	55177749	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	55177749	55177749	C	T	SNP	LILRB4	ENST00000270452	human	ensembl	74_37	+1	known	silent	c.933	p.D311	0.022	NULL	pfam_Immunoglobulin,pfscan_Ig-like_dom	-	no_errors	LILRB4	HGNC	ENSG00000186818				94	0	0	93	11	10.5769
KIR2DL1	0	genome.wustl.edu	37	19	55286823	55286823	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	55286823	55286823	G	A	SNP	KIR2DL1	ENST00000336077	human	ensembl	74_37	+1	known	missense	c.577	p.G193R	0.000	pfam_Immunoglobulin,smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL1	HGNC	ENSG00000125498				262	0	0	290	87	23.0769
ZNF579	0	genome.wustl.edu	37	19	56090051	56090051	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	56090051	56090051	C	T	SNP	ZNF579	ENST00000325421	human	ensembl	74_37	-1	known	missense	c.955	p.V319I	0.991	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF579	HGNC	ENSG00000218891				25	0	0	35	6	14.6341
FIZ1	0	genome.wustl.edu	37	19	56104559	56104559	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	56104559	56104559	G	A	SNP	FIZ1	ENST00000221665	human	ensembl	74_37	-1	known	missense	c.748	p.H250Y	0.928	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	FIZ1	HGNC	ENSG00000179943				16	0	0	9	6	40
NLRP5	0	genome.wustl.edu	37	19	56538862	56538862	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	56538862	56538862	C	A	SNP	NLRP5	ENST00000390649	human	ensembl	74_37	+1	known	silent	c.1263	p.V421	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP5	HGNC	ENSG00000171487				29	0	0	36	9	20
ZSCAN5C	0	genome.wustl.edu	37	19	56717414	56717414	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	56717414	56717414	C	T	SNP	ZSCAN5C	ENST00000376267	human	ensembl	74_37	+1	known	silent	c.132	p.H44	0.001	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5C	HGNC	ENSG00000204532				42	0	0	55	25	31.25
ZNF71	0	genome.wustl.edu	37	19	57133352	57133352	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	57133352	57133352	G	A	SNP	ZNF71	ENST00000328070	human	ensembl	74_37	+1	known	missense	c.697	p.E233K	0.032	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF71	HGNC	ENSG00000197951				60	0	0	80	22	21.5686
CATSPERD	0	genome.wustl.edu	37	19	5745968	5745968	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	5745968	5745968	G	T	SNP	CATSPERD	ENST00000381624	human	ensembl	74_37	+1	known	silent	c.702	p.G234	0.062	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom	-	no_errors	CATSPERD	HGNC	ENSG00000174898				375	0	0	420	23	5.19187
USP29	0	genome.wustl.edu	37	19	57642249	57642249	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	57642249	57642249	C	A	SNP	USP29	ENST00000254181	human	ensembl	74_37	+1	known	missense	c.2206	p.Q736K	0.001	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP29	HGNC	ENSG00000131864				105	0	0	102	43	29.6552
ZNF543	0	genome.wustl.edu	37	19	57839291	57839291	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	57839291	57839291	G	A	SNP	ZNF543	ENST00000321545	human	ensembl	74_37	+1	known	missense	c.461	p.R154H	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF543	HGNC	ENSG00000178229				108	0	0	107	28	20.7407
ZNF211	0	genome.wustl.edu	37	19	58153212	58153212	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	58153212	58153212	A	G	SNP	ZNF211	ENST00000240731	human	ensembl	74_37	+1	known	missense	c.1397	p.Y466C	0.099	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF211	HGNC	ENSG00000121417				101	0	0	132	39	22.807
ZSCAN4	0	genome.wustl.edu	37	19	58189782	58189782	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	58189782	58189782	G	T	SNP	ZSCAN4	ENST00000318203	human	ensembl	74_37	+1	known	nonsense	c.811	p.G271*	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN4	HGNC	ENSG00000180532				99	0	0	105	32	23.3577
C19orf18	0	genome.wustl.edu	37	19	58483842	58483842	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	58483842	58483842	A	G	SNP	C19orf18	ENST00000314391	human	ensembl	74_37	-1	known	missense	c.257	p.L86P	0.000	NULL	NULL	-	no_errors	C19orf18	HGNC	ENSG00000177025				54	0	0	46	6	11.5385
SLC27A5	0	genome.wustl.edu	37	19	59011987	59011987	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	59011987	59011987	G	A	SNP	SLC27A5	ENST00000263093	human	ensembl	74_37	-1	known	silent	c.1269	p.F423	0.753	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A5	HGNC	ENSG00000083807				97	0	0	88	31	26.0504
SLC27A5	0	genome.wustl.edu	37	19	59022708	59022708	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	59022708	59022708	G	T	SNP	SLC27A5	ENST00000263093	human	ensembl	74_37	-1	known	missense	c.615	p.N205K	0.948	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A5	HGNC	ENSG00000083807				22	0	0	19	6	24
RANBP3	0	genome.wustl.edu	37	19	5933443	5933443	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	5933443	5933443	C	T	SNP	RANBP3	ENST00000340578	human	ensembl	74_37	-1	known	missense	c.454	p.G152S	1.000	NULL	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	-	no_errors	RANBP3	HGNC	ENSG00000031823				64	0	0	37	37	50
CD209	0	genome.wustl.edu	37	19	7810788	7810788	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	7810788	7810788	C	T	SNP	CD209	ENST00000315599	human	ensembl	74_37	-1	known	missense	c.364	p.E122K	0.018	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CD209	HGNC	ENSG00000090659				256	0	0	183	142	43.6923
MUC16	0	genome.wustl.edu	37	19	9019283	9019283	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	9019283	9019283	C	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.37604	p.S12535N	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				24	0	0	40	11	21.5686
MUC16	0	genome.wustl.edu	37	19	9056926	9056926	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	9056926	9056926	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.30520	p.M10174V	0.002	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				15	0	0	54	49	47.5728
MUC16	0	genome.wustl.edu	37	19	9061718	9061718	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	9061718	9061718	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.25728	p.F8576	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				15	0	0	53	21	28.3784
LONRF2	0	genome.wustl.edu	37	2	100916228	100916228	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	100916228	100916228	G	A	SNP	LONRF2	ENST00000393437	human	ensembl	74_37	-1	known	silent	c.1218	p.D406	0.000	NULL	pfam_Pept_S16_N,pfam_Znf_C3HC4_RING-type,superfamily_PUA-like_domain,smart_Znf_RING,smart_TPR_repeat,smart_Pept_S16_N,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	LONRF2	HGNC	ENSG00000170500				120	1	0.826446	131	21	13.8158
CNOT11	0	genome.wustl.edu	37	2	101885796	101885796	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	101885796	101885796	G	A	SNP	CNOT11	ENST00000289382	human	ensembl	74_37	+1	known	missense	c.1454	p.R485Q	1.000	pfam_DUF2363	pfam_DUF2363	-	no_errors	CNOT11	HGNC	ENSG00000158435				122	0	0	102	37	26.6187
EN1	0	genome.wustl.edu	37	2	119600627	119600627	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	119600627	119600627	C	T	SNP	EN1	ENST00000295206	human	ensembl	74_37	-1	known	missense	c.1066	p.A356T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,pfam_Homeobox-engrailed_C-terminal,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeodomain_engrailed,prints_Homeobox_metazoa,prints_Antifreeze_1,prints_K_chnl_volt-dep_Kv1.4	-	no_errors	EN1	HGNC	ENSG00000163064				67	0	0	53	21	28.3784
SNTG2	0	genome.wustl.edu	37	2	1263213	1263213	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	1263213	1263213	G	A	SNP	SNTG2	ENST00000308624	human	ensembl	74_37	+1	known	silent	c.1077	p.K359	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SNTG2	HGNC	ENSG00000172554				83	0	0	63	13	17.1053
WDR33	0	genome.wustl.edu	37	2	128476878	128476878	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	128476878	128476878	C	T	SNP	WDR33	ENST00000322313	human	ensembl	74_37	-1	known	silent	c.2721	p.T907	0.998	NULL	pfam_WD40_repeat,pfam_Collagen,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR33	HGNC	ENSG00000136709				289	0	0	283	44	13.4557
WDR33	0	genome.wustl.edu	37	2	128476952	128476952	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	128476952	128476952	G	A	SNP	WDR33	ENST00000322313	human	ensembl	74_37	-1	known	missense	c.2647	p.P883S	1.000	NULL	pfam_WD40_repeat,pfam_Collagen,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR33	HGNC	ENSG00000136709				227	0	0	197	56	22.1344
AMER3	0	genome.wustl.edu	37	2	131521965	131521965	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	131521965	131521965	C	T	SNP	AMER3	ENST00000321420	human	ensembl	74_37	+1	known	missense	c.2320	p.P774S	0.000	NULL	pfam_Uncharacterised_FAM123	-	no_errors	AMER3	HGNC	ENSG00000178171				41	0	0	33	12	26.6667
NCKAP5	0	genome.wustl.edu	37	2	133483297	133483297	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	133483297	133483297	G	A	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	silent	c.5616	p.S1872	0.732	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771				24	0	0	25	8	24.2424
TMEM163	0	genome.wustl.edu	37	2	135215680	135215680	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	135215680	135215680	C	T	SNP	TMEM163	ENST00000281924	human	ensembl	74_37	-1	known	silent	c.732	p.K244	1.000	NULL	NULL	-	no_errors	TMEM163	HGNC	ENSG00000152128				148	0	0	141	41	22.5275
LRP1B	0	genome.wustl.edu	37	2	141201956	141201956	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	141201956	141201956	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.10237	p.N3413D	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				106	0	0	163	46	22.0096
LRP1B	0	genome.wustl.edu	37	2	141660492	141660492	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	141660492	141660492	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.3763	p.V1255I	1.000	NULL	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				50	0	0	105	23	17.9688
CACNB4	0	genome.wustl.edu	37	2	152739824	152739824	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	152739824	152739824	G	A	SNP	CACNB4	ENST00000539935	human	ensembl	74_37	-1	known	missense	c.208	p.R70W	0.810	pfam_VDCC_L_bsu	pfam_GK/Ca_channel_bsu,pfam_VDCC_L_bsu,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_SH3_domain,prints_VDCC_L_bsu	-	no_errors	CACNB4	HGNC	ENSG00000182389				136	0	0	157	31	16.4894
TANC1	0	genome.wustl.edu	37	2	160025864	160025864	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	160025864	160025864	T	C	SNP	TANC1	ENST00000263635	human	ensembl	74_37	+1	known	silent	c.1050	p.G350	0.987	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC1	HGNC	ENSG00000115183				119	0	0	118	55	31.7919
TBR1	0	genome.wustl.edu	37	2	162280585	162280585	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	162280585	162280585	C	T	SNP	TBR1	ENST00000389554	human	ensembl	74_37	+1	known	silent	c.1896	p.Y632	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBR1	HGNC	ENSG00000136535				17	0	0	18	11	37.931
COBLL1	0	genome.wustl.edu	37	2	165600195	165600195	+	Splice_Site	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	165600195	165600195	A	G	SNP	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	splice_site	c.389+2	e4+2	1.000	-	-	-	no_errors	COBLL1	HGNC	ENSG00000082438				22	0	0	73	32	30.4762
LRP2	0	genome.wustl.edu	37	2	170042445	170042445	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	170042445	170042445	C	A	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.9413	p.R3138L	0.000	superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				92	0	0	117	46	28.2209
GORASP2	0	genome.wustl.edu	37	2	171822463	171822463	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	171822463	171822463	C	T	SNP	GORASP2	ENST00000452526	human	ensembl	74_37	+1	known	silent	c.1218	p.P406	0.086	NULL	pfam_GRASP55/65_PDZ,superfamily_PDZ	-	no_errors	GORASP2	HGNC	ENSG00000115806				88	0	0	100	32	24.2424
CDCA7	0	genome.wustl.edu	37	2	174229538	174229538	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	174229538	174229538	C	T	SNP	CDCA7	ENST00000306721	human	ensembl	74_37	+1	known	nonsense	c.715	p.R239*	0.001	NULL	pfam_Znf-4CXXC_R1	-	no_errors	CDCA7	HGNC	ENSG00000144354				104	0	0	146	11	7.00637
HOXD9	0	genome.wustl.edu	37	2	176987559	176987559	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	176987559	176987559	C	T	SNP	HOXD9	ENST00000249499	human	ensembl	74_37	+1	known	silent	c.63	p.Y21	1.000	pfam_Hox9_activation_N,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXD9	HGNC	ENSG00000128709				32	0	0	27	9	25
PDE11A	0	genome.wustl.edu	37	2	178740634	178740634	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	178740634	178740634	T	C	SNP	PDE11A	ENST00000286063	human	ensembl	74_37	-1	known	missense	c.1319	p.K440R	1.000	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE11A	HGNC	ENSG00000128655				61	0	0	109	6	5.21739
TTN	0	genome.wustl.edu	37	2	179443547	179443547	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	179443547	179443547	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.60506	p.A20169V	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				18	0	0	118	37	23.871
TTN	0	genome.wustl.edu	37	2	179474816	179474816	+	Splice_Site	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	179474816	179474816	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	splice_site	c.43732+1	e219+1	1.000	-	-	-	no_errors	TTN	HGNC	ENSG00000155657				10	0	0	84	29	25.6637
TTN	0	genome.wustl.edu	37	2	179576715	179576715	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	179576715	179576715	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.24110	p.N8037S	1.000	pfam_Ig_I-set,pfam_Ig_V-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				47	0	0	87	21	19.4444
TTN	0	genome.wustl.edu	37	2	179580340	179580340	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	179580340	179580340	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.22069	p.V7357I	0.373	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_V-set_subgr,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				19	0	0	36	24	40
ITGA4	0	genome.wustl.edu	37	2	182323028	182323028	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	182323028	182323028	C	T	SNP	ITGA4	ENST00000397033	human	ensembl	74_37	+1	known	silent	c.303	p.C101	0.971	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA4	HGNC	ENSG00000115232				19	0	0	25	5	16.6667
STK17B	0	genome.wustl.edu	37	2	197002360	197002360	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	197002360	197002360	G	T	SNP	STK17B	ENST00000263955	human	ensembl	74_37	-1	known	silent	c.930	p.S310	0.609	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK17B	HGNC	ENSG00000081320				110	0	0	149	8	5.09554
HECW2	0	genome.wustl.edu	37	2	197183855	197183855	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	197183855	197183855	C	T	SNP	HECW2	ENST00000260983	human	ensembl	74_37	-1	known	missense	c.1759	p.A587T	0.069	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW2	HGNC	ENSG00000138411				36	0	0	51	12	19.0476
SGOL2	0	genome.wustl.edu	37	2	201437347	201437347	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	201437347	201437347	G	T	SNP	SGOL2	ENST00000357799	human	ensembl	74_37	+1	known	missense	c.2278	p.D760Y	0.000	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535				91	0	0	132	29	18.0124
CASP8	0	genome.wustl.edu	37	2	202149917	202149917	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	202149917	202149917	C	T	SNP	CASP8	ENST00000358485	human	ensembl	74_37	+1	known	missense	c.1358	p.P453L	1.000	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_p10	pfam_DED,pfam_Pept_C14_caspase,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012				85	0	0	92	29	23.9669
HS1BP3	0	genome.wustl.edu	37	2	20845204	20845204	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	20845204	20845204	C	A	SNP	HS1BP3	ENST00000304031	human	ensembl	74_37	-1	known	missense	c.94	p.G32C	1.000	superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	HS1BP3	HGNC	ENSG00000118960				109	0	0	99	37	27.2059
APOB	0	genome.wustl.edu	37	2	21228330	21228330	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	21228330	21228330	C	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.11410	p.E3804K	0.929	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				135	0	0	274	84	23.4637
APOB	0	genome.wustl.edu	37	2	21228376	21228376	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	21228376	21228376	C	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	silent	c.11364	p.E3788	0.991	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				109	0	0	248	90	26.6272
APOB	0	genome.wustl.edu	37	2	21265342	21265342	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	21265342	21265342	G	A	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.128	p.A43V	0.891	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				97	0	0	101	41	28.8732
SPAG16	0	genome.wustl.edu	37	2	214878701	214878701	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	214878701	214878701	G	A	SNP	SPAG16	ENST00000331683	human	ensembl	74_37	+1	known	missense	c.1427	p.G476E	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SPAG16	HGNC	ENSG00000144451				79	0	0	182	55	23.2068
ABCA12	0	genome.wustl.edu	37	2	215839522	215839522	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	215839522	215839522	C	T	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	missense	c.5448	p.M1816I	0.024	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452				100	0	0	117	38	24.5161
MREG	0	genome.wustl.edu	37	2	216809613	216809613	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	216809613	216809613	C	T	SNP	MREG	ENST00000263268	human	ensembl	74_37	-1	known	silent	c.618	p.L206	0.001	NULL	NULL	-	no_errors	MREG	HGNC	ENSG00000118242				53	0	0	59	15	20.2703
IGFBP5	0	genome.wustl.edu	37	2	217559282	217559282	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	217559282	217559282	G	A	SNP	IGFBP5	ENST00000233813	human	ensembl	74_37	-1	known	missense	c.217	p.R73C	0.995	pfam_IGFBP-like,superfamily_Growth_fac_rcpt_N_dom,smart_IGFBP-like,prints_IGFBP_1-6_chordata	pfam_Thyroglobulin_1,pfam_IGFBP-like,superfamily_Thyroglobulin_1,superfamily_Growth_fac_rcpt_N_dom,smart_IGFBP-like,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1,prints_IGFBP_1-6_chordata,prints_IGFBP-5	-	no_errors	IGFBP5	HGNC	ENSG00000115461				10	0	0	6	3	33.3333
RNF25	0	genome.wustl.edu	37	2	219532655	219532655	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	219532655	219532655	T	C	SNP	RNF25	ENST00000295704	human	ensembl	74_37	-1	known	missense	c.337	p.M113V	1.000	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pfscan_RWD-domain	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,smart_Znf_RING,pfscan_RWD-domain,pfscan_Znf_RING	-	no_errors	RNF25	HGNC	ENSG00000163481				169	0	0	207	59	22.1805
CDK5R2	0	genome.wustl.edu	37	2	219825311	219825311	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	219825311	219825311	G	A	SNP	CDK5R2	ENST00000302625	human	ensembl	74_37	+1	known	missense	c.769	p.E257K	1.000	pfam_CDK5_activator,superfamily_Cyclin-like,pirsf_CDK5_activator	pfam_CDK5_activator,superfamily_Cyclin-like,pirsf_CDK5_activator	-	no_errors	CDK5R2	HGNC	ENSG00000171450				185	1	0.537634	189	61	24.4
PTPRN	0	genome.wustl.edu	37	2	220164503	220164503	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	220164503	220164503	A	G	SNP	PTPRN	ENST00000295718	human	ensembl	74_37	-1	known	missense	c.1442	p.L481P	1.000	pfam_Receptor_IA-2	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRN	HGNC	ENSG00000054356				90	0	0	97	31	24.2188
CHPF	0	genome.wustl.edu	37	2	220404955	220404955	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	220404955	220404955	C	T	SNP	CHPF	ENST00000243776	human	ensembl	74_37	-1	known	missense	c.1478	p.R493H	0.997	pfam_Chond_GalNAc	pfam_Chond_GalNAc	-	no_errors	CHPF	HGNC	ENSG00000123989				34	0	0	38	9	19.1489
SLC4A3	0	genome.wustl.edu	37	2	220494985	220494985	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	220494985	220494985	T	G	SNP	SLC4A3	ENST00000273063	human	ensembl	74_37	+1	known	missense	c.803	p.L268R	1.000	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange_3,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A3	HGNC	ENSG00000114923				57	0	0	42	9	17.6471
SLC4A3	0	genome.wustl.edu	37	2	220501408	220501408	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	220501408	220501408	C	T	SNP	SLC4A3	ENST00000273063	human	ensembl	74_37	+1	known	nonsense	c.2428	p.R810*	0.998	pfam_HCO3_transpt_C,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange_3,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A3	HGNC	ENSG00000114923				118	0	0	112	26	18.8406
TRIP12	0	genome.wustl.edu	37	2	230725188	230725188	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	230725188	230725188	T	A	SNP	TRIP12	ENST00000543084	human	ensembl	74_37	-1	known	missense	c.158	p.N53I	1.000	NULL	NULL	-	no_errors	TRIP12	HGNC	ENSG00000153827				100	1	0.990099	135	41	23.2955
B3GNT7	0	genome.wustl.edu	37	2	232262945	232262945	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	232262945	232262945	G	A	SNP	B3GNT7	ENST00000287590	human	ensembl	74_37	+1	known	missense	c.515	p.R172H	1.000	pfam_Glyco_trans_31	pfam_Glyco_trans_31,pfam_Fringe-like	-	no_errors	B3GNT7	HGNC	ENSG00000156966				34	0	0	43	16	27.1186
TRPM8	0	genome.wustl.edu	37	2	234854587	234854587	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	234854587	234854587	G	A	SNP	TRPM8	ENST00000324695	human	ensembl	74_37	+1	known	missense	c.787	p.V263M	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM8	HGNC	ENSG00000144481				135	0	0	150	55	26.8293
RNPEPL1	0	genome.wustl.edu	37	2	241517269	241517269	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	241517269	241517269	G	A	SNP	RNPEPL1	ENST00000270357	human	ensembl	74_37	+1	known	missense	c.1445	p.S482N	0.175	NULL	pfam_Peptidase_M1_C,pfam_Peptidase_M1_N,superfamily_ARM-type_fold,prints_Peptidase_M1_N	-	no_errors	RNPEPL1	HGNC	ENSG00000142327				22	0	0	22	14	38.8889
GPR35	0	genome.wustl.edu	37	2	241569626	241569626	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	241569626	241569626	C	T	SNP	GPR35	ENST00000438013	human	ensembl	74_37	+1	known	missense	c.350	p.T117M	0.073	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR35	HGNC	ENSG00000178623				86	0	0	83	26	23.8532
PTRHD1	0	genome.wustl.edu	37	2	25013338	25013338	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	25013338	25013338	C	T	SNP	PTRHD1	ENST00000328379	human	ensembl	74_37	-1	known	missense	c.365	p.R122Q	0.996	pfam_PTH2,superfamily_Pep_tRNA_hydro_II_dom	pfam_PTH2,superfamily_Pep_tRNA_hydro_II_dom	-	no_errors	PTRHD1	HGNC	ENSG00000184924				69	0	0	72	25	25.7732
DNMT3A	0	genome.wustl.edu	37	2	25464521	25464521	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	25464521	25464521	C	A	SNP	DNMT3A	ENST00000264709	human	ensembl	74_37	-1	known	missense	c.1992	p.E664D	1.000	pfam_C5_MeTfrase	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3A	HGNC	ENSG00000119772				46	0	0	41	12	22.6415
EMILIN1	0	genome.wustl.edu	37	2	27305168	27305168	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	27305168	27305168	G	A	SNP	EMILIN1	ENST00000380320	human	ensembl	74_37	+1	known	silent	c.729	p.Q243	1.000	NULL	pfam_EMI_domain,pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	EMILIN1	HGNC	ENSG00000138080				58	0	0	70	21	23.0769
CAD	0	genome.wustl.edu	37	2	27456970	27456970	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	27456970	27456970	C	T	SNP	CAD	ENST00000264705	human	ensembl	74_37	+1	known	missense	c.3494	p.A1165V	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,pfscan_ATP-grasp,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				76	0	0	70	6	7.89474
PPP1CB	0	genome.wustl.edu	37	2	29022154	29022154	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	29022154	29022154	G	A	SNP	PPP1CB	ENST00000296122	human	ensembl	74_37	+1	known	silent	c.969	p.P323	0.991	NULL	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP1CB	HGNC	ENSG00000213639				62	0	0	93	5	5.10204
NLRC4	0	genome.wustl.edu	37	2	32476488	32476488	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	32476488	32476488	C	T	SNP	NLRC4	ENST00000360906	human	ensembl	74_37	-1	known	missense	c.445	p.V149M	0.001	superfamily_P-loop_NTPase	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NLRC4	HGNC	ENSG00000091106				70	0	0	88	27	23.4783
BIRC6	0	genome.wustl.edu	37	2	32824935	32824935	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	32824935	32824935	C	T	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	nonsense	c.13960	p.R4654*	1.000	pfam_UBQ-conjugat_E2,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760				45	0	0	49	15	23.4375
LTBP1	0	genome.wustl.edu	37	2	33500077	33500077	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	33500077	33500077	G	A	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	missense	c.2792	p.R931H	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323				145	0	0	170	53	23.7668
SULT6B1	0	genome.wustl.edu	37	2	37414569	37414569	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	37414569	37414569	C	A	SNP	SULT6B1	ENST00000535679	human	ensembl	74_37	-1	known	missense	c.241	p.A81S	0.291	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT6B1	HGNC	ENSG00000138068				70	0	0	61	13	17.5676
KIAA1841	0	genome.wustl.edu	37	2	61319641	61319641	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	61319641	61319641	C	T	SNP	KIAA1841	ENST00000356719	human	ensembl	74_37	+1	known	silent	c.1131	p.F377	1.000	pfam_DUF3342	pfam_DUF3342,superfamily_BTB/POZ_fold,superfamily_Homeodomain-like	-	no_errors	KIAA1841	HGNC	ENSG00000162929				125	0	0	133	37	21.7647
OTX1	0	genome.wustl.edu	37	2	63282962	63282962	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	63282962	63282962	G	A	SNP	OTX1	ENST00000282549	human	ensembl	74_37	+1	known	silent	c.576	p.S192	0.005	pfam_Otx_TF_C,prints_Otx1_TF	pfam_Otx_TF_C,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Otx1_TF,prints_Otx_TF	-	no_errors	OTX1	HGNC	ENSG00000115507				23	0	0	23	14	37.8378
ANTXR1	0	genome.wustl.edu	37	2	69271944	69271944	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	69271944	69271944	A	G	SNP	ANTXR1	ENST00000303714	human	ensembl	74_37	+1	known	missense	c.295	p.R99G	1.000	pirsf_Anthrax_toxin_rcpt,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_extracel,pfam_Anthrax_toxin_rcpt_C,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXR1	HGNC	ENSG00000169604				47	0	0	107	33	23.5714
ADD2	0	genome.wustl.edu	37	2	70905912	70905912	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	70905912	70905912	G	A	SNP	ADD2	ENST00000264436	human	ensembl	74_37	-1	known	missense	c.1307	p.T436M	0.990	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD2	HGNC	ENSG00000075340				296	0	0	259	91	26
DYSF	0	genome.wustl.edu	37	2	71753393	71753393	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	71753393	71753393	G	A	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	missense	c.1190	p.S397N	1.000	pfam_FerIin-domain,superfamily_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636				389	0	0	333	97	22.5581
SMYD5	0	genome.wustl.edu	37	2	73452826	73452826	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	73452826	73452826	T	C	SNP	SMYD5	ENST00000389501	human	ensembl	74_37	+1	known	missense	c.1103	p.L368P	1.000	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SMYD5	HGNC	ENSG00000135632				426	0	0	414	148	26.3345
ALMS1	0	genome.wustl.edu	37	2	73826620	73826620	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	73826620	73826620	A	G	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	silent	c.11637	p.V3879	0.000	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127				214	0	0	239	83	25.7764
C2orf78	0	genome.wustl.edu	37	2	74043233	74043233	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	74043233	74043233	T	C	SNP	C2orf78	ENST00000409561	human	ensembl	74_37	+1	novel	missense	c.1883	p.M628T	0.992	NULL	NULL	-	no_errors	C2orf78	HGNC	ENSG00000187833				82	0	0	79	21	21
ACTG2	0	genome.wustl.edu	37	2	74143792	74143792	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	74143792	74143792	C	G	SNP	ACTG2	ENST00000345517	human	ensembl	74_37	+1	known	missense	c.887	p.A296G	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTG2	HGNC	ENSG00000163017				64	0	0	79	23	22.549
BOLA3	0	genome.wustl.edu	37	2	74362716	74362716	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	74362716	74362716	G	A	SNP	BOLA3	ENST00000295326	human	ensembl	74_37	-1	known	missense	c.239	p.T80M	0.009	NULL	NULL	-	no_errors	BOLA3	HGNC	ENSG00000163170				183	1	0.543478	183	57	23.75
AUP1	0	genome.wustl.edu	37	2	74755569	74755569	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	74755569	74755569	T	C	SNP	AUP1	ENST00000377526	human	ensembl	74_37	-1	known	missense	c.572	p.Q191R	0.826	NULL	pfam_CUE,smart_CUE,pfscan_CUE	-	no_errors	AUP1	HGNC	ENSG00000115307				78	0	0	78	24	23.5294
CTNNA2	0	genome.wustl.edu	37	2	80646660	80646660	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	80646660	80646660	C	A	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.1326	p.S442R	0.983	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				80	0	0	142	42	22.8261
PTCD3	0	genome.wustl.edu	37	2	86352130	86352130	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	86352130	86352130	C	T	SNP	PTCD3	ENST00000409277	human	ensembl	74_37	+1	known	missense	c.605	p.T202M	0.998	NULL	NULL	-	no_errors	PTCD3	HGNC	ENSG00000132300				59	0	0	40	12	23.0769
KDM3A	0	genome.wustl.edu	37	2	86677036	86677036	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	86677036	86677036	A	G	SNP	KDM3A	ENST00000312912	human	ensembl	74_37	+1	known	missense	c.293	p.E98G	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3A	HGNC	ENSG00000115548				56	0	0	169	47	21.7593
FAHD2B	0	genome.wustl.edu	37	2	97751910	97751910	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	97751910	97751910	G	A	SNP	FAHD2B	ENST00000272610	human	ensembl	74_37	-1	known	missense	c.488	p.A163V	1.000	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	-	no_errors	FAHD2B	HGNC	ENSG00000144199				31	0	0	30	5	14.2857
VWA3B	0	genome.wustl.edu	37	2	98804519	98804519	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	98804519	98804519	G	A	SNP	VWA3B	ENST00000477737	human	ensembl	74_37	+1	known	missense	c.1393	p.V465I	0.199	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3B	HGNC	ENSG00000168658				92	0	0	91	37	28.9062
SDCBP2	0	genome.wustl.edu	37	20	1294021	1294021	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	1294021	1294021	C	T	SNP	SDCBP2	ENST00000339987	human	ensembl	74_37	-1	known	missense	c.347	p.R116H	0.763	pfam_PDZ,superfamily_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SDCBP2	HGNC	ENSG00000125775				27	0	0	24	7	22.5806
SEC23B	0	genome.wustl.edu	37	20	18511337	18511337	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	18511337	18511337	A	T	SNP	SEC23B	ENST00000262544	human	ensembl	74_37	+1	known	missense	c.1123	p.M375L	1.000	pfam_Sec23/24_trunk_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Gelsolin_dom,pfam_Znf_Sec23_Sec24,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC23B	HGNC	ENSG00000101310				135	0	0	151	32	17.4863
PAX1	0	genome.wustl.edu	37	20	21687581	21687581	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	21687581	21687581	C	T	SNP	PAX1	ENST00000398485	human	ensembl	74_37	+1	known	silent	c.792	p.G264	0.068	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX1	HGNC	ENSG00000125813				53	0	0	71	18	20.2247
TPX2	0	genome.wustl.edu	37	20	30381814	30381814	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	30381814	30381814	T	C	SNP	TPX2	ENST00000340513	human	ensembl	74_37	+1	known	missense	c.1781	p.L594P	1.000	NULL	pfam_TPX2_central_dom,pfam_Aurora-A-bd,pfam_TPX2_dom_C	-	no_errors	TPX2	HGNC	ENSG00000088325				104	0	0	96	35	26.7176
MAP1LC3A	0	genome.wustl.edu	37	20	33147545	33147545	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	33147545	33147545	G	A	SNP	MAP1LC3A	ENST00000360668	human	ensembl	74_37	+1	known	missense	c.209	p.R70H	1.000	pfam_Atg8_fam,pfam_Atg12	pfam_Atg8_fam,pfam_Atg12	-	no_errors	MAP1LC3A	HGNC	ENSG00000101460				134	0	0	128	47	26.8571
NCOA6	0	genome.wustl.edu	37	20	33345744	33345744	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	33345744	33345744	C	T	SNP	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	silent	c.807	p.Q269	0.002	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646				37	0	0	42	15	26.3158
MMP24	0	genome.wustl.edu	37	20	33862135	33862135	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	33862135	33862135	T	C	SNP	MMP24	ENST00000246186	human	ensembl	74_37	+1	known	missense	c.1661	p.V554A	1.000	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP24	HGNC	ENSG00000125966				166	0	0	165	64	27.9476
GDF5	0	genome.wustl.edu	37	20	34022366	34022366	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	34022366	34022366	C	T	SNP	GDF5	ENST00000374369	human	ensembl	74_37	-1	known	missense	c.847	p.V283M	0.944	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF5	HGNC	ENSG00000125965				25	0	0	48	9	15.7895
CNBD2	0	genome.wustl.edu	37	20	34618312	34618312	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	34618312	34618312	G	T	SNP	CNBD2	ENST00000373973	human	ensembl	74_37	+1	known	missense	c.1473	p.Q491H	0.999	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNBD2	HGNC	ENSG00000149646				175	0	0	246	14	5.38462
TLDC2	0	genome.wustl.edu	37	20	35507503	35507503	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	35507503	35507503	G	A	SNP	TLDC2	ENST00000217320	human	ensembl	74_37	+1	known	silent	c.249	p.T83	0.006	pfam_TLDc,smart_TLDc	pfam_TLDc,smart_TLDc	-	no_errors	TLDC2	HGNC	ENSG00000101342				134	0	0	100	35	25.9259
PTPRT	0	genome.wustl.edu	37	20	41101154	41101154	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	41101154	41101154	C	T	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.1202	p.R401Q	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				59	0	0	57	24	29.6296
SRSF6	0	genome.wustl.edu	37	20	42088725	42088725	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	42088725	42088725	G	A	SNP	SRSF6	ENST00000244020	human	ensembl	74_37	+1	known	missense	c.434	p.R145Q	1.000	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF6	HGNC	ENSG00000124193				90	0	0	118	24	16.9014
HNF4A	0	genome.wustl.edu	37	20	43058237	43058237	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	43058237	43058237	G	A	SNP	HNF4A	ENST00000316099	human	ensembl	74_37	+1	known	missense	c.1357	p.V453I	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4A	HGNC	ENSG00000101076				281	0	0	236	85	26.4798
PREX1	0	genome.wustl.edu	37	20	47270000	47270000	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	47270000	47270000	G	A	SNP	PREX1	ENST00000371941	human	ensembl	74_37	-1	known	nonsense	c.2245	p.Q749*	1.000	superfamily_PDZ,smart_PDZ	pfam_DH-domain,pfam_DEP_dom,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX1	HGNC	ENSG00000124126				196	0	0	167	50	23.0415
STAU1	0	genome.wustl.edu	37	20	47739654	47739654	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	47739654	47739654	G	A	SNP	STAU1	ENST00000371856	human	ensembl	74_37	-1	known	missense	c.941	p.P314L	0.999	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	STAU1	HGNC	ENSG00000124214				51	0	0	58	17	22.6667
KCNB1	0	genome.wustl.edu	37	20	47990503	47990503	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	47990503	47990503	T	C	SNP	KCNB1	ENST00000371741	human	ensembl	74_37	-1	known	missense	c.1594	p.M532V	1.000	pfam_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv2.1	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.1,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB1	HGNC	ENSG00000158445				402	0	0	298	96	24.3655
ATP9A	0	genome.wustl.edu	37	20	50244187	50244187	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	50244187	50244187	G	A	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	silent	c.1797	p.L599	0.138	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793				486	0	0	425	140	24.7788
DOK5	0	genome.wustl.edu	37	20	53226972	53226972	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	53226972	53226972	C	T	SNP	DOK5	ENST00000262593	human	ensembl	74_37	+1	known	silent	c.645	p.D215	0.781	pfam_Insln_rcpt_S1,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK5	HGNC	ENSG00000101134				64	0	0	82	24	22.6415
CASS4	0	genome.wustl.edu	37	20	55012542	55012542	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	55012542	55012542	C	T	SNP	CASS4	ENST00000360314	human	ensembl	74_37	+1	known	missense	c.359	p.A120V	0.988	NULL	pfam_Serine_rich,pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	CASS4	HGNC	ENSG00000087589				235	0	0	218	49	18.3521
CTCFL	0	genome.wustl.edu	37	20	56094287	56094287	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	56094287	56094287	G	A	SNP	CTCFL	ENST00000423479	human	ensembl	74_37	-1	known	missense	c.901	p.R301W	0.969	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCFL	HGNC	ENSG00000124092				108	0	0	133	46	25.6983
LSM14B	0	genome.wustl.edu	37	20	60701385	60701385	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	60701385	60701385	C	T	SNP	LSM14B	ENST00000253001	human	ensembl	74_37	+1	known	missense	c.317	p.S106L	0.984	NULL	pfam_FDF_dom,superfamily_LSM_dom	-	no_errors	LSM14B	HGNC	ENSG00000149657				32	0	0	47	10	17.5439
LAMA5	0	genome.wustl.edu	37	20	60908501	60908501	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	60908501	60908501	C	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.3058	p.A1020T	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				45	0	0	42	16	27.5862
RTEL1	0	genome.wustl.edu	37	20	62321132	62321132	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	62321132	62321132	G	A	SNP	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	silent	c.2055	p.Q685	1.000	superfamily_P-loop_NTPase,smart_ATP-dep_Helicase_C,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366				50	0	0	55	20	26.6667
TPD52L2	0	genome.wustl.edu	37	20	62520579	62520579	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	62520579	62520579	T	C	SNP	TPD52L2	ENST00000217121	human	ensembl	74_37	+1	known	silent	c.582	p.V194	1.000	pfam_TPD52	pfam_TPD52	-	no_errors	TPD52L2	HGNC	ENSG00000101150				26	0	0	27	8	22.8571
NPBWR2	0	genome.wustl.edu	37	20	62737475	62737475	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	62737475	62737475	C	T	SNP	NPBWR2	ENST00000369768	human	ensembl	74_37	-1	known	missense	c.710	p.R237H	0.201	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt	-	no_errors	NPBWR2	HGNC	ENSG00000125522				37	0	0	39	10	20.4082
MYT1	0	genome.wustl.edu	37	20	62836917	62836917	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	62836917	62836917	G	A	SNP	MYT1	ENST00000536311	human	ensembl	74_37	+1	known	missense	c.161	p.C54Y	1.000	pfam_Znf_C2HC	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1	HGNC	ENSG00000196132				133	0	0	120	41	25.4658
TMX4	0	genome.wustl.edu	37	20	7980484	7980484	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	7980484	7980484	C	T	SNP	TMX4	ENST00000246024	human	ensembl	74_37	-1	known	missense	c.362	p.R121H	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TMX4	HGNC	ENSG00000125827				44	0	0	71	26	26.8041
PLCB1	0	genome.wustl.edu	37	20	8608995	8608995	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	8608995	8608995	C	T	SNP	PLCB1	ENST00000338037	human	ensembl	74_37	+1	known	missense	c.301	p.R101C	1.000	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB1	HGNC	ENSG00000182621				58	0	0	112	19	14.5038
RSPO4	0	genome.wustl.edu	37	20	947858	947858	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	947858	947858	G	A	SNP	RSPO4	ENST00000217260	human	ensembl	74_37	-1	known	missense	c.368	p.P123L	0.996	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO4	HGNC	ENSG00000101282				68	0	0	67	24	26.3736
CYYR1	0	genome.wustl.edu	37	21	27945300	27945300	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	27945300	27945300	G	A	SNP	CYYR1	ENST00000435845	human	ensembl	74_37	-1	known	missense	c.284	p.P95L	0.003	NULL	pfam_CYYR1	-	no_errors	CYYR1	HGNC	ENSG00000166265				45	0	0	55	15	21.4286
BACH1	0	genome.wustl.edu	37	21	30698948	30698948	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	30698948	30698948	C	T	SNP	BACH1	ENST00000286800	human	ensembl	74_37	+1	known	missense	c.803	p.P268L	0.217	NULL	pfam_BTB_POZ,pfam_bZIP,superfamily_BTB/POZ_fold,superfamily_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP	-	no_errors	BACH1	HGNC	ENSG00000156273				105	1	0.943396	99	24	19.5122
HUNK	0	genome.wustl.edu	37	21	33246192	33246192	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	33246192	33246192	G	T	SNP	HUNK	ENST00000270112	human	ensembl	74_37	+1	known	missense	c.205	p.G69C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HUNK	HGNC	ENSG00000142149				23	0	0	17	4	19.0476
PCP4	0	genome.wustl.edu	37	21	41270416	41270416	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	41270416	41270416	G	A	SNP	PCP4	ENST00000328619	human	ensembl	74_37	+1	known	missense	c.25	p.A9T	0.999	NULL	NULL	-	no_errors	PCP4	HGNC	ENSG00000183036				74	0	0	64	30	31.9149
DSCAM	0	genome.wustl.edu	37	21	41516548	41516548	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	41516548	41516548	G	A	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	silent	c.3129	p.S1043	0.019	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587				133	0	0	144	44	23.4043
FAM3B	0	genome.wustl.edu	37	21	42718974	42718974	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	42718974	42718974	T	C	SNP	FAM3B	ENST00000357985	human	ensembl	74_37	+1	known	silent	c.432	p.S144	0.376	NULL	NULL	-	no_errors	FAM3B	HGNC	ENSG00000183844				218	0	0	187	49	20.7627
PDE9A	0	genome.wustl.edu	37	21	44182210	44182210	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	44182210	44182210	G	A	SNP	PDE9A	ENST00000291539	human	ensembl	74_37	+1	known	missense	c.1103	p.R368H	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE9A	HGNC	ENSG00000160191				56	0	0	61	19	23.75
PKNOX1	0	genome.wustl.edu	37	21	44438317	44438317	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	44438317	44438317	A	T	SNP	PKNOX1	ENST00000291547	human	ensembl	74_37	+1	known	missense	c.697	p.T233S	0.993	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	PKNOX1	HGNC	ENSG00000160199				62	0	0	46	16	25.8065
MICAL3	0	genome.wustl.edu	37	22	18301213	18301213	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	18301213	18301213	C	T	SNP	MICAL3	ENST00000441493	human	ensembl	74_37	-1	known	missense	c.4214	p.R1405Q	0.111	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156				185	0	0	166	50	23.1481
ENSG00000161103	0	genome.wustl.edu	37	22	18846126	18846126	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	18846126	18846126	G	A	SNP	ENSG00000161103	ENST00000412938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	AC008132.13	Clone_based_vega_gene	ENSG00000161103				24	0	0	35	8	18.6047
TSSK2	0	genome.wustl.edu	37	22	19119120	19119120	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	19119120	19119120	G	A	SNP	TSSK2	ENST00000399635	human	ensembl	74_37	+1	known	missense	c.208	p.G70S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TSSK2	HGNC	ENSG00000206203				61	0	0	43	17	28.3333
C22orf39	0	genome.wustl.edu	37	22	19396104	19396104	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	19396104	19396104	C	A	SNP	C22orf39	ENST00000509549	human	ensembl	74_37	-1	known	nonsense	c.268	p.G90*	1.000	NULL	NULL	-	no_errors	C22orf39	HGNC	ENSG00000242259				91	0	0	90	30	25
UFD1L	0	genome.wustl.edu	37	22	19463058	19463058	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	19463058	19463058	C	T	SNP	UFD1L	ENST00000263202	human	ensembl	74_37	-1	known	missense	c.71	p.R24H	1.000	pfam_UFD1	pfam_UFD1	-	no_errors	UFD1L	HGNC	ENSG00000070010				138	0	0	151	46	23.3503
TRMT2A	0	genome.wustl.edu	37	22	20103586	20103586	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	20103586	20103586	C	T	SNP	TRMT2A	ENST00000252136	human	ensembl	74_37	-1	known	missense	c.574	p.E192K	1.000	NULL	pfam_U5_MeTrfase,pfam_PCMT,pfam_Small_mtfrase_dom,pfam_RNA_methylase_dom,pfam_RNA_MeTrfase_RsmD,pfam_Methyltransf_11,pfam_tRNA_(Gua-N-7)_MeTrfase,pfam_UbiE/COQ5_MeTrFase,pfscan_RRM_dom	-	no_errors	TRMT2A	HGNC	ENSG00000099899				79	0	0	83	26	23.8532
AIFM3	0	genome.wustl.edu	37	22	21330537	21330537	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	21330537	21330537	G	A	SNP	AIFM3	ENST00000399167	human	ensembl	74_37	+1	known	missense	c.841	p.V281M	0.982	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_Rieske_2Fe-2S,superfamily_Rieske_2Fe-2S,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Pyridine_nuc-diS_OxRdtase_2	-	no_errors	AIFM3	HGNC	ENSG00000183773				43	0	0	36	12	25
P2RX6	0	genome.wustl.edu	37	22	21377631	21377631	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	21377631	21377631	C	A	SNP	P2RX6	ENST00000413302	human	ensembl	74_37	+1	known	missense	c.706	p.P236T	1.000	pfam_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X6_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX6	HGNC	ENSG00000099957				219	1	0.454545	193	66	25.4826
MAPK1	0	genome.wustl.edu	37	22	22153338	22153338	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	22153338	22153338	C	T	SNP	MAPK1	ENST00000215832	human	ensembl	74_37	-1	known	missense	c.572	p.R191H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK1/2,prints_MAPK_ERK3/4	-	no_errors	MAPK1	HGNC	ENSG00000100030				51	0	0	69	19	21.5909
SEC14L3	0	genome.wustl.edu	37	22	30856091	30856091	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	30856091	30856091	C	T	SNP	SEC14L3	ENST00000215812	human	ensembl	74_37	-1	known	missense	c.1120	p.A374T	0.261	superfamily_GOLD,pfscan_GOLD	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_GOLD,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L3	HGNC	ENSG00000100012				147	1	0.675676	148	8	5.12821
SEC14L4	0	genome.wustl.edu	37	22	30887696	30887696	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	30887696	30887696	G	A	SNP	SEC14L4	ENST00000255858	human	ensembl	74_37	-1	known	silent	c.945	p.G315	0.998	superfamily_GOLD,pfscan_GOLD	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_GOLD,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L4	HGNC	ENSG00000133488				127	0	0	126	41	24.5509
OSBP2	0	genome.wustl.edu	37	22	31301891	31301891	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	31301891	31301891	G	A	SNP	OSBP2	ENST00000332585	human	ensembl	74_37	+1	known	missense	c.2443	p.V815I	0.994	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,superfamily_DNA-bd_dom_put,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBP2	HGNC	ENSG00000184792				27	0	0	36	10	21.7391
SMTN	0	genome.wustl.edu	37	22	31496923	31496923	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	31496923	31496923	C	T	SNP	SMTN	ENST00000333137	human	ensembl	74_37	+1	known	nonsense	c.2656	p.R886*	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_Smoothelin,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTN	HGNC	ENSG00000183963				19	0	0	22	8	26.6667
TIMP3	0	genome.wustl.edu	37	22	33255244	33255244	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	33255244	33255244	C	T	SNP	TIMP3	ENST00000266085	human	ensembl	74_37	+1	known	silent	c.516	p.F172	0.232	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	-	no_errors	TIMP3	HGNC	ENSG00000100234				79	0	0	97	28	22.4
MCM5	0	genome.wustl.edu	37	22	35817310	35817310	+	Splice_Site	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	35817310	35817310	G	T	SNP	MCM5	ENST00000216122	human	ensembl	74_37	+1	known	splice_site	c.1833-1	e14-1	1.000	-	-	-	no_errors	MCM5	HGNC	ENSG00000100297				62	0	0	60	21	25.9259
ELFN2	0	genome.wustl.edu	37	22	37769658	37769658	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	37769658	37769658	G	A	SNP	ELFN2	ENST00000402918	human	ensembl	74_37	-1	known	silent	c.1917	p.S639	0.984	NULL	superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,pfscan_LPXTG_anchor	-	no_errors	ELFN2	HGNC	ENSG00000166897				19	0	0	23	7	23.3333
PLA2G6	0	genome.wustl.edu	37	22	38528987	38528987	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	38528987	38528987	C	T	SNP	PLA2G6	ENST00000332509	human	ensembl	74_37	-1	known	missense	c.928	p.V310M	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_Patatin/PLipase_A2-rel,superfamily_Ankyrin_rpt-contain_dom,superfamily_Acyl_Trfase/lysoPLipase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PLA2G6	HGNC	ENSG00000184381				11	0	0	13	4	23.5294
ST13	0	genome.wustl.edu	37	22	41226918	41226918	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	41226918	41226918	G	A	SNP	ST13	ENST00000216218	human	ensembl	74_37	-1	known	missense	c.724	p.R242C	1.000	NULL	pfam_TPR_1,smart_TPR_repeat,smart_STI1_HS-bd,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ST13	HGNC	ENSG00000100380				95	0	0	108	38	26.0274
SCUBE1	0	genome.wustl.edu	37	22	43735243	43735243	+	Splice_Site	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	43735243	43735243	T	C	SNP	SCUBE1	ENST00000360835	human	ensembl	74_37	-1	known	splice_site	c.89-2	e2-2	0.508	-	-	-	no_errors	SCUBE1	HGNC	ENSG00000159307				60	0	0	68	17	20
MPPED1	0	genome.wustl.edu	37	22	43898596	43898596	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	43898596	43898596	G	A	SNP	MPPED1	ENST00000538182	human	ensembl	74_37	+1	known	missense	c.920	p.R307H	1.000	pfam_PEstase_dom	pfam_PEstase_dom	-	no_errors	MPPED1	HGNC	ENSG00000186732				128	0	0	120	24	16.6667
EFCAB6	0	genome.wustl.edu	37	22	44031067	44031067	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	44031067	44031067	G	A	SNP	EFCAB6	ENST00000262726	human	ensembl	74_37	-1	known	silent	c.2013	p.D671	0.000	NULL	pfam_EF_hand_Ca-bd_contain_6,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB6	HGNC	ENSG00000186976				121	0	0	81	38	31.9328
CELSR1	0	genome.wustl.edu	37	22	46792559	46792559	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	46792559	46792559	G	A	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.5786	p.P1929L	0.970	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				30	0	0	34	17	33.3333
FAM19A5	0	genome.wustl.edu	37	22	49103656	49103656	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	49103656	49103656	G	A	SNP	FAM19A5	ENST00000358295	human	ensembl	74_37	+1	known	silent	c.369	p.T123	1.000	pfam_Chemokine-like_FAM19A2	pfam_Chemokine-like_FAM19A2	-	no_errors	FAM19A5	HGNC	ENSG00000219438				159	0	0	155	73	32.0175
BRD1	0	genome.wustl.edu	37	22	50191612	50191612	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	50191612	50191612	C	T	SNP	BRD1	ENST00000216267	human	ensembl	74_37	-1	known	missense	c.1939	p.V647M	0.997	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,prints_Bromodomain,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	BRD1	HGNC	ENSG00000100425				80	0	0	76	21	21.6495
CRELD2	0	genome.wustl.edu	37	22	50316958	50316958	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	50316958	50316958	G	A	SNP	CRELD2	ENST00000404488	human	ensembl	74_37	+1	known	silent	c.912	p.T304	0.000	superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Furin_repeat	pfam_DUF3456,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_Furin_repeat,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	CRELD2	HGNC	ENSG00000184164				29	0	0	29	12	29.2683
TUBGCP6	0	genome.wustl.edu	37	22	50658984	50658984	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	50658984	50658984	G	T	SNP	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	silent	c.3804	p.T1268	0.003	pfam_TUBGCP	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159				46	0	0	57	12	17.3913
IRAK2	0	genome.wustl.edu	37	3	10206671	10206671	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	10206671	10206671	G	T	SNP	IRAK2	ENST00000256458	human	ensembl	74_37	+1	known	missense	c.33	p.W11C	1.000	superfamily_DEATH-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	IRAK2	HGNC	ENSG00000134070				31	0	0	33	11	25
ATG7	0	genome.wustl.edu	37	3	11372885	11372885	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	11372885	11372885	C	T	SNP	ATG7	ENST00000354449	human	ensembl	74_37	+1	known	silent	c.750	p.V250	1.000	tigrfam_Atg7	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_Atg7	-	no_errors	ATG7	HGNC	ENSG00000197548				202	0	0	289	22	7.07395
ARHGAP31	0	genome.wustl.edu	37	3	119134094	119134094	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	119134094	119134094	C	A	SNP	ARHGAP31	ENST00000264245	human	ensembl	74_37	+1	known	silent	c.3318	p.S1106	0.991	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081				170	0	0	202	63	23.7736
GTF2E1	0	genome.wustl.edu	37	3	120500198	120500198	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	120500198	120500198	C	T	SNP	GTF2E1	ENST00000283875	human	ensembl	74_37	+1	known	missense	c.1201	p.R401C	1.000	pfam_TFIIE_asu_C	pfam_TFIIEa/SarR/Rpc3_HTH_dom,pfam_TFIIE_asu_C,pfam_Znf_TFIIB,smart_TFIIE_asu	-	no_errors	GTF2E1	HGNC	ENSG00000153767				72	0	0	115	25	17.8571
GOLGB1	0	genome.wustl.edu	37	3	121415620	121415620	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	121415620	121415620	G	A	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	silent	c.3735	p.D1245	0.000	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230				105	0	0	182	74	28.9062
GOLGB1	0	genome.wustl.edu	37	3	121416977	121416977	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	121416977	121416977	A	G	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	missense	c.2378	p.L793P	0.924	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230				101	0	0	192	66	25.5814
SEMA5B	0	genome.wustl.edu	37	3	122632777	122632777	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	122632777	122632777	C	T	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.2222	p.R741H	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684				79	0	0	62	19	23.4568
ATP2C1	0	genome.wustl.edu	37	3	130682921	130682921	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	130682921	130682921	C	T	SNP	ATP2C1	ENST00000393221	human	ensembl	74_37	+1	known	missense	c.1108	p.P370S	1.000	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2C1	HGNC	ENSG00000017260				75	0	0	221	53	19.3431
NPHP3	0	genome.wustl.edu	37	3	132403629	132403629	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	132403629	132403629	G	A	SNP	NPHP3	ENST00000337331	human	ensembl	74_37	-1	known	silent	c.3339	p.D1113	0.693	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR-3,superfamily_P-loop_NTPase,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NPHP3	HGNC	ENSG00000113971				73	0	0	91	25	21.5517
TF	0	genome.wustl.edu	37	3	133476768	133476768	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	133476768	133476768	C	T	SNP	TF	ENST00000402696	human	ensembl	74_37	+1	known	silent	c.1026	p.I342	0.002	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	TF	HGNC	ENSG00000091513				86	0	0	92	33	26.4
HDAC11	0	genome.wustl.edu	37	3	13525002	13525002	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	13525002	13525002	C	T	SNP	HDAC11	ENST00000295757	human	ensembl	74_37	+1	known	missense	c.190	p.R64W	0.954	pfam_His_deacetylse_dom	pfam_His_deacetylse_dom,prints_His_deacetylse	-	no_errors	HDAC11	HGNC	ENSG00000163517				147	0	0	152	42	21.6495
PCCB	0	genome.wustl.edu	37	3	136048788	136048788	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	136048788	136048788	C	T	SNP	PCCB	ENST00000251654	human	ensembl	74_37	+1	known	nonsense	c.1540	p.R514*	0.872	pfam_Carboxyl_trans,pfscan_COA_CT_C	pfam_Carboxyl_trans,pfscan_COA_CT_N,pfscan_COA_CT_C	-	no_errors	PCCB	HGNC	ENSG00000114054				130	0	0	160	45	21.9512
FBLN2	0	genome.wustl.edu	37	3	13679178	13679178	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	13679178	13679178	G	A	SNP	FBLN2	ENST00000404922	human	ensembl	74_37	+1	known	missense	c.3455	p.R1152H	1.000	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_comp_syst,smart_EG-like_dom,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd_dom,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520				37	0	0	28	11	28.2051
FOXL2	0	genome.wustl.edu	37	3	138665438	138665438	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	138665438	138665438	C	T	SNP	FOXL2	ENST00000330315	human	ensembl	74_37	-1	known	missense	c.127	p.G43R	0.518	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXL2	HGNC	ENSG00000183770				33	0	0	29	15	34.0909
COPB2	0	genome.wustl.edu	37	3	139077618	139077618	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	139077618	139077618	C	A	SNP	COPB2	ENST00000333188	human	ensembl	74_37	-1	known	missense	c.2521	p.D841Y	1.000	pirsf_COPB2	pirsf_COPB2,pfam_Coatomer_WD-assoc_reg,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	COPB2	HGNC	ENSG00000184432				96	0	0	121	27	18.2432
XRN1	0	genome.wustl.edu	37	3	142051258	142051258	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	142051258	142051258	T	C	SNP	XRN1	ENST00000264951	human	ensembl	74_37	-1	known	missense	c.4178	p.E1393G	0.359	pirsf_5_3_exoribonuclease_1	pfam_Put_53exo,pirsf_5_3_exoribonuclease_1	-	no_errors	XRN1	HGNC	ENSG00000114127				53	0	0	69	24	25.8065
XRN1	0	genome.wustl.edu	37	3	142137373	142137373	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	142137373	142137373	G	A	SNP	XRN1	ENST00000264951	human	ensembl	74_37	-1	known	missense	c.1319	p.T440M	1.000	pirsf_5_3_exoribonuclease_1	pfam_Put_53exo,pirsf_5_3_exoribonuclease_1	-	no_errors	XRN1	HGNC	ENSG00000114127				108	0	0	116	53	31.3609
CNTN6	0	genome.wustl.edu	37	3	1424848	1424848	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	1424848	1424848	T	C	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	missense	c.2389	p.S797P	1.000	superfamily_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115				64	0	0	120	37	23.5669
CHST2	0	genome.wustl.edu	37	3	142840671	142840671	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	142840671	142840671	C	T	SNP	CHST2	ENST00000309575	human	ensembl	74_37	+1	known	missense	c.1013	p.A338V	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST2	HGNC	ENSG00000175040				17	0	0	28	6	17.6471
RFTN1	0	genome.wustl.edu	37	3	16358500	16358500	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	16358500	16358500	G	A	SNP	RFTN1	ENST00000334133	human	ensembl	74_37	-1	known	silent	c.1572	p.G524	0.000	NULL	NULL	-	no_errors	RFTN1	HGNC	ENSG00000131378				168	0	0	143	65	31.25
PHC3	0	genome.wustl.edu	37	3	169890411	169890411	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	169890411	169890411	C	T	SNP	PHC3	ENST00000495893	human	ensembl	74_37	-1	known	silent	c.270	p.L90	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC3	HGNC	ENSG00000173889				103	0	0	99	36	26.6667
KCNMB3	0	genome.wustl.edu	37	3	178984477	178984477	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	178984477	178984477	C	T	SNP	KCNMB3	ENST00000349697	human	ensembl	74_37	-1	known	missense	c.22	p.V8M	0.126	NULL	pfam_K_chnl_Ca-activ_BK_bsu	-	no_errors	KCNMB3	HGNC	ENSG00000171121				58	0	0	45	8	15.0943
PEX5L	0	genome.wustl.edu	37	3	179754369	179754369	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	179754369	179754369	G	A	SNP	PEX5L	ENST00000467460	human	ensembl	74_37	-1	known	nonsense	c.19	p.Q7*	1.000	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PEX5L	HGNC	ENSG00000114757				287	0	0	296	85	22.3097
MAP6D1	0	genome.wustl.edu	37	3	183535841	183535841	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	183535841	183535841	C	T	SNP	MAP6D1	ENST00000318631	human	ensembl	74_37	-1	known	missense	c.460	p.A154T	0.034	pfam_MAP6/FAM154	pfam_MAP6/FAM154	-	no_errors	MAP6D1	HGNC	ENSG00000180834				147	0	0	139	48	25.6684
SGOL1	0	genome.wustl.edu	37	3	20216058	20216058	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	20216058	20216058	T	G	SNP	SGOL1	ENST00000263753	human	ensembl	74_37	-1	known	missense	c.965	p.Q322P	0.000	NULL	pfam_Shugoshin_N,pfam_Shugoshin_C	-	no_errors	SGOL1	HGNC	ENSG00000129810				32	0	0	38	20	34.4828
THRB	0	genome.wustl.edu	37	3	24185082	24185082	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	24185082	24185082	G	A	SNP	THRB	ENST00000356447	human	ensembl	74_37	-1	known	silent	c.648	p.D216	0.972	superfamily_Nucl_hormone_rcpt_ligand-bd,prints_ThyrH_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_ThyrH_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	THRB	HGNC	ENSG00000151090				122	0	0	139	56	28.7179
NEK10	0	genome.wustl.edu	37	3	27326330	27326330	+	Splice_Site	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	27326330	27326330	C	T	SNP	NEK10	ENST00000341435	human	ensembl	74_37	-1	known	splice_site	c.1911+1	e20+1	1.000	-	-	-	no_errors	NEK10	HGNC	ENSG00000163491				76	0	0	100	28	21.875
EOMES	0	genome.wustl.edu	37	3	27758906	27758906	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	27758906	27758906	C	A	SNP	EOMES	ENST00000449599	human	ensembl	74_37	-1	known	missense	c.1773	p.M591I	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	EOMES	HGNC	ENSG00000163508				92	0	0	103	32	23.7037
CNTN4	0	genome.wustl.edu	37	3	3081856	3081856	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	3081856	3081856	G	A	SNP	CNTN4	ENST00000397461	human	ensembl	74_37	+1	known	missense	c.2299	p.V767M	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN4	HGNC	ENSG00000144619				91	0	0	117	38	24.5161
IL5RA	0	genome.wustl.edu	37	3	3143376	3143376	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	3143376	3143376	C	A	SNP	IL5RA	ENST00000445864	human	ensembl	74_37	-1	known	nonsense	c.367	p.G123*	1.000	NULL	NULL	-	no_errors	IL5RA	HGNC	ENSG00000091181				102	0	0	95	21	18.1034
CRTAP	0	genome.wustl.edu	37	3	33165922	33165922	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	33165922	33165922	G	A	SNP	CRTAP	ENST00000320954	human	ensembl	74_37	+1	known	missense	c.644	p.R215Q	1.000	NULL	NULL	-	no_errors	CRTAP	HGNC	ENSG00000170275				98	0	0	84	32	27.5862
ACVR2B	0	genome.wustl.edu	37	3	38524744	38524744	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	38524744	38524744	G	A	SNP	ACVR2B	ENST00000352511	human	ensembl	74_37	+1	known	missense	c.1460	p.G487D	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2B	HGNC	ENSG00000114739				159	0	0	162	49	23.2227
SCN5A	0	genome.wustl.edu	37	3	38592438	38592438	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	38592438	38592438	T	C	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.5425	p.I1809V	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				71	0	0	83	25	23.1481
SCN10A	0	genome.wustl.edu	37	3	38739967	38739967	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	38739967	38739967	G	A	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.4744	p.R1582C	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				137	1	0.724638	160	60	27.2727
SEC22C	0	genome.wustl.edu	37	3	42605070	42605070	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	42605070	42605070	G	T	SNP	SEC22C	ENST00000449617	human	ensembl	74_37	-1	known	missense	c.407	p.P136H	1.000	NULL	superfamily_Longin-like_dom	-	no_errors	SEC22C	HGNC	ENSG00000093183				71	0	0	102	28	21.5385
ZNF445	0	genome.wustl.edu	37	3	44488178	44488178	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	44488178	44488178	G	T	SNP	ZNF445	ENST00000396077	human	ensembl	74_37	-1	known	missense	c.2985	p.S995R	0.214	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF445	HGNC	ENSG00000185219				138	0	0	151	40	20.9424
ZNF35	0	genome.wustl.edu	37	3	44700211	44700211	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	44700211	44700211	T	C	SNP	ZNF35	ENST00000396056	human	ensembl	74_37	+1	known	missense	c.356	p.L119P	0.013	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF35	HGNC	ENSG00000169981				77	0	0	94	28	22.9508
CLEC3B	0	genome.wustl.edu	37	3	45077254	45077254	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	45077254	45077254	C	T	SNP	CLEC3B	ENST00000296130	human	ensembl	74_37	+1	known	silent	c.447	p.G149	0.688	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC3B	HGNC	ENSG00000163815				56	0	0	60	13	17.8082
LTF	0	genome.wustl.edu	37	3	46487972	46487972	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	46487972	46487972	C	A	SNP	LTF	ENST00000231751	human	ensembl	74_37	-1	known	missense	c.1316	p.S439I	0.000	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	LTF	HGNC	ENSG00000012223				75	0	0	59	17	22.3684
COL7A1	0	genome.wustl.edu	37	3	48611124	48611124	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	48611124	48611124	G	A	SNP	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	missense	c.6572	p.P2191L	0.976	pfam_Collagen	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270				19	0	0	16	17	51.5152
CELSR3	0	genome.wustl.edu	37	3	48692475	48692475	+	Splice_Site	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	48692475	48692475	A	G	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	splice_site	c.4988+2	e6+2	1.000	-	-	-	no_errors	CELSR3	HGNC	ENSG00000008300				42	0	0	53	21	28.3784
CELSR3	0	genome.wustl.edu	37	3	48699498	48699498	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	48699498	48699498	G	A	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	silent	c.570	p.N190	0.003	NULL	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				197	0	0	185	51	21.6102
LAMB2	0	genome.wustl.edu	37	3	49161199	49161199	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	49161199	49161199	G	T	SNP	LAMB2	ENST00000305544	human	ensembl	74_37	-1	known	silent	c.3759	p.A1253	0.017	NULL	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037				96	0	0	90	21	18.9189
RNF123	0	genome.wustl.edu	37	3	49742418	49742418	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	49742418	49742418	G	A	SNP	RNF123	ENST00000327697	human	ensembl	74_37	+1	known	missense	c.1961	p.R654H	1.000	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_Znf_RING,pfscan_B30.2/SPRY,pfscan_Znf_RING	-	no_errors	RNF123	HGNC	ENSG00000164068				25	0	0	17	4	19.0476
MST1R	0	genome.wustl.edu	37	3	49940481	49940481	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	49940481	49940481	C	T	SNP	MST1R	ENST00000296474	human	ensembl	74_37	-1	known	missense	c.562	p.V188M	0.996	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MST1R	HGNC	ENSG00000164078				51	0	0	68	25	26.8817
SEMA3F	0	genome.wustl.edu	37	3	50211666	50211666	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	50211666	50211666	C	T	SNP	SEMA3F	ENST00000002829	human	ensembl	74_37	+1	known	silent	c.339	p.G113	0.974	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3F	HGNC	ENSG00000001617				97	0	0	87	34	28.0992
VPRBP	0	genome.wustl.edu	37	3	51455629	51455629	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	51455629	51455629	A	G	SNP	VPRBP	ENST00000335891	human	ensembl	74_37	-1	known	silent	c.2112	p.S704	1.000	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	VPRBP	HGNC	ENSG00000145041				25	0	0	26	4	13.3333
DNAH1	0	genome.wustl.edu	37	3	52423487	52423487	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	52423487	52423487	G	A	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	missense	c.9506	p.R3169H	0.999	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841				18	0	0	25	3	10.7143
APPL1	0	genome.wustl.edu	37	3	57283464	57283464	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	57283464	57283464	C	T	SNP	APPL1	ENST00000288266	human	ensembl	74_37	+1	known	missense	c.940	p.R314C	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PTB/PI_dom,smart_Pleckstrin_homology,smart_PTB/PI_dom,pfscan_Pleckstrin_homology,pfscan_PTB/PI_dom	-	no_errors	APPL1	HGNC	ENSG00000157500				132	0	0	143	43	23.1183
PTPRG	0	genome.wustl.edu	37	3	62153736	62153736	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	62153736	62153736	G	A	SNP	PTPRG	ENST00000474889	human	ensembl	74_37	+1	known	missense	c.932	p.R311H	0.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRG	HGNC	ENSG00000144724				41	0	0	76	23	23.2323
PRICKLE2	0	genome.wustl.edu	37	3	64133071	64133071	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	64133071	64133071	C	T	SNP	PRICKLE2	ENST00000295902	human	ensembl	74_37	-1	known	silent	c.1095	p.L365	0.721	NULL	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE2	HGNC	ENSG00000163637				177	0	0	160	55	25.5814
MAGI1	0	genome.wustl.edu	37	3	65416494	65416494	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	65416494	65416494	G	A	SNP	MAGI1	ENST00000402939	human	ensembl	74_37	-1	known	missense	c.1426	p.R476W	1.000	pfam_PDZ,superfamily_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI1	HGNC	ENSG00000151276				25	0	0	98	33	25.1908
KBTBD8	0	genome.wustl.edu	37	3	67058751	67058751	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	67058751	67058751	G	A	SNP	KBTBD8	ENST00000417314	human	ensembl	74_37	+1	known	missense	c.1748	p.R583Q	1.000	pirsf_Kelch-like_gigaxonin	pfam_BACK,pfam_BTB_POZ,pfam_Kelch_1,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD8	HGNC	ENSG00000163376				59	0	0	87	30	25.641
ROBO2	0	genome.wustl.edu	37	3	77607139	77607139	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	77607139	77607139	A	G	SNP	ROBO2	ENST00000461745	human	ensembl	74_37	+1	known	missense	c.1276	p.N426D	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO2	HGNC	ENSG00000185008				25	0	0	92	30	24.5902
OXTR	0	genome.wustl.edu	37	3	8809756	8809756	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	8809756	8809756	G	A	SNP	OXTR	ENST00000316793	human	ensembl	74_37	-1	known	missense	c.118	p.R40C	1.000	prints_Vasoprsn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Oxytocn_rcpt,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OXTR	HGNC	ENSG00000180914				14	0	0	16	7	30.4348
ARL13B	0	genome.wustl.edu	37	3	93755588	93755588	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	93755588	93755588	C	T	SNP	ARL13B	ENST00000394222	human	ensembl	74_37	+1	known	nonsense	c.679	p.R227*	0.986	NULL	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL13B	HGNC	ENSG00000169379				22	0	0	32	16	33.3333
PHF17	0	genome.wustl.edu	37	4	129776926	129776926	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	129776926	129776926	G	A	SNP	PHF17	ENST00000226319	human	ensembl	74_37	+1	known	missense	c.838	p.V280I	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF17	HGNC	ENSG00000077684				55	0	0	59	21	26.25
BOD1L1	0	genome.wustl.edu	37	4	13605718	13605718	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	13605718	13605718	C	T	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	missense	c.2806	p.A936T	0.004	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219				175	0	0	223	75	25.1678
PCDH18	0	genome.wustl.edu	37	4	138442446	138442446	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	138442446	138442446	A	G	SNP	PCDH18	ENST00000344876	human	ensembl	74_37	-1	known	missense	c.3145	p.Y1049H	0.994	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH18	HGNC	ENSG00000189184				46	0	0	47	16	25.3968
NR3C2	0	genome.wustl.edu	37	4	149357534	149357534	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	149357534	149357534	G	A	SNP	NR3C2	ENST00000355292	human	ensembl	74_37	-1	known	missense	c.479	p.P160L	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR3C2	HGNC	ENSG00000151623				141	0	0	209	57	21.4286
DCHS2	0	genome.wustl.edu	37	4	155250793	155250793	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	155250793	155250793	G	A	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	missense	c.2435	p.T812I	0.983	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410				48	0	0	68	25	26.8817
FAM198B	0	genome.wustl.edu	37	4	159092457	159092457	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	159092457	159092457	C	T	SNP	FAM198B	ENST00000393807	human	ensembl	74_37	-1	known	missense	c.71	p.R24H	0.000	NULL	NULL	-	no_errors	FAM198B	HGNC	ENSG00000164125				72	0	0	104	33	24.0876
FNIP2	0	genome.wustl.edu	37	4	159756572	159756572	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	159756572	159756572	T	A	SNP	FNIP2	ENST00000379346	human	ensembl	74_37	+1	known	missense	c.740	p.V247D	1.000	NULL	NULL	-	no_errors	FNIP2	HGNC	ENSG00000052795				215	0	0	296	86	22.5131
MFAP3L	0	genome.wustl.edu	37	4	170913207	170913207	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	170913207	170913207	C	A	SNP	MFAP3L	ENST00000361618	human	ensembl	74_37	-1	known	missense	c.552	p.K184N	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MFAP3L	HGNC	ENSG00000198948				146	0	0	130	47	26.5537
GALNTL6	0	genome.wustl.edu	37	4	172735778	172735778	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	172735778	172735778	C	T	SNP	GALNTL6	ENST00000506823	human	ensembl	74_37	+1	known	missense	c.47	p.T16M	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNTL6	HGNC	ENSG00000174473				69	0	0	111	27	19.5652
ASB5	0	genome.wustl.edu	37	4	177146478	177146478	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	177146478	177146478	G	A	SNP	ASB5	ENST00000296525	human	ensembl	74_37	-1	known	nonsense	c.211	p.R71*	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB5	HGNC	ENSG00000164122				147	0	0	182	47	20.524
TRAPPC11	0	genome.wustl.edu	37	4	184605943	184605943	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	184605943	184605943	A	G	SNP	TRAPPC11	ENST00000334690	human	ensembl	74_37	+1	known	missense	c.1516	p.M506V	1.000	pfam_Foie-gras_1	pfam_Foie-gras_1,pfam_DUF1683_C	-	no_errors	TRAPPC11	HGNC	ENSG00000168538				127	0	0	143	41	22.2826
HELT	0	genome.wustl.edu	37	4	185941867	185941867	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	185941867	185941867	G	A	SNP	HELT	ENST00000338875	human	ensembl	74_37	+1	known	missense	c.925	p.G309S	1.000	NULL	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_Orange,pfscan_bHLH_dom	-	no_errors	HELT	HGNC	ENSG00000187821				101	0	0	101	37	26.8116
FAT1	0	genome.wustl.edu	37	4	187527365	187527365	+	Silent	SNP	A	A	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	187527365	187527365	A	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	silent	c.10209	p.I3403	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				48	0	0	58	10	14.7059
DHX15	0	genome.wustl.edu	37	4	24542564	24542564	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	24542564	24542564	G	A	SNP	DHX15	ENST00000336812	human	ensembl	74_37	-1	known	missense	c.1493	p.T498I	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606				23	0	0	32	12	27.2727
MFSD10	0	genome.wustl.edu	37	4	2932779	2932779	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	2932779	2932779	C	T	SNP	MFSD10	ENST00000514800	human	ensembl	74_37	-1	novel	missense	c.1261	p.A421T	0.000	pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD10	HGNC	ENSG00000109736				18	0	0	29	11	27.5
HTT	0	genome.wustl.edu	37	4	3208281	3208281	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	3208281	3208281	A	G	SNP	HTT	ENST00000355072	human	ensembl	74_37	+1	known	missense	c.5777	p.D1926G	1.000	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386				158	0	0	109	42	27.8146
KLHL5	0	genome.wustl.edu	37	4	39077615	39077615	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	39077615	39077615	C	A	SNP	KLHL5	ENST00000359687	human	ensembl	74_37	+1	known	silent	c.552	p.S184	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL5	HGNC	ENSG00000109790				141	0	0	211	51	19.4656
LNX1	0	genome.wustl.edu	37	4	54439943	54439943	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	54439943	54439943	G	A	SNP	LNX1	ENST00000263925	human	ensembl	74_37	-1	known	missense	c.227	p.P76L	1.000	smart_Znf_RING,pfscan_Znf_RING	pfam_PDZ,superfamily_PDZ,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	LNX1	HGNC	ENSG00000072201				19	0	0	15	5	25
EVC	0	genome.wustl.edu	37	4	5803721	5803721	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	5803721	5803721	C	T	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	silent	c.2349	p.S783	0.007	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840				45	0	0	31	9	22.5
PDE6B	0	genome.wustl.edu	37	4	619512	619512	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	619512	619512	G	A	SNP	PDE6B	ENST00000496514	human	ensembl	74_37	+1	known	missense	c.97	p.A33T	0.042	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6B	HGNC	ENSG00000133256				84	0	0	87	14	13.8614
PDE6B	0	genome.wustl.edu	37	4	619707	619707	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	619707	619707	C	T	SNP	PDE6B	ENST00000496514	human	ensembl	74_37	+1	known	missense	c.292	p.R98C	1.000	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6B	HGNC	ENSG00000133256				16	0	0	18	6	25
LPHN3	0	genome.wustl.edu	37	4	62800606	62800606	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	62800606	62800606	G	A	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	+1	known	missense	c.2161	p.A721T	1.000	pfam_DUF3497	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471				20	0	0	63	23	26.7442
WFS1	0	genome.wustl.edu	37	4	6296857	6296857	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	6296857	6296857	G	A	SNP	WFS1	ENST00000226760	human	ensembl	74_37	+1	known	missense	c.802	p.D268N	0.981	NULL	NULL	-	no_errors	WFS1	HGNC	ENSG00000109501				101	0	0	119	42	26.087
EPHA5	0	genome.wustl.edu	37	4	66233137	66233137	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	66233137	66233137	C	T	SNP	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	missense	c.1862	p.C621Y	1.000	pirsf_Tyr_kinase_ephrin_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242				27	0	0	63	20	24.0964
TBC1D14	0	genome.wustl.edu	37	4	6925426	6925426	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	6925426	6925426	G	A	SNP	TBC1D14	ENST00000409757	human	ensembl	74_37	+1	known	missense	c.310	p.A104T	0.974	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D14	HGNC	ENSG00000132405				184	1	0.540541	188	58	23.5772
CCDC96	0	genome.wustl.edu	37	4	7043869	7043869	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	7043869	7043869	G	A	SNP	CCDC96	ENST00000310085	human	ensembl	74_37	-1	known	missense	c.797	p.A266V	0.000	NULL	NULL	-	no_errors	CCDC96	HGNC	ENSG00000173013				232	0	0	208	62	22.963
RUFY3	0	genome.wustl.edu	37	4	71654646	71654646	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	71654646	71654646	G	T	SNP	RUFY3	ENST00000417478	human	ensembl	74_37	+1	known	missense	c.1375	p.D459Y	1.000	NULL	pfam_Run,superfamily_Prefoldin,smart_Run,pfscan_Run	-	no_errors	RUFY3	HGNC	ENSG00000018189				87	0	0	78	26	25
ADAMTS3	0	genome.wustl.edu	37	4	73149282	73149282	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	73149282	73149282	T	C	SNP	ADAMTS3	ENST00000286657	human	ensembl	74_37	-1	known	silent	c.3189	p.L1063	0.224	NULL	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS3	HGNC	ENSG00000156140				105	0	0	160	50	23.8095
ADAMTS3	0	genome.wustl.edu	37	4	73205406	73205406	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	73205406	73205406	C	T	SNP	ADAMTS3	ENST00000286657	human	ensembl	74_37	-1	known	silent	c.666	p.S222	0.001	NULL	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS3	HGNC	ENSG00000156140				48	0	0	149	54	26.601
PSAPL1	0	genome.wustl.edu	37	4	7435122	7435122	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	7435122	7435122	G	A	SNP	PSAPL1	ENST00000319098	human	ensembl	74_37	-1	known	silent	c.1485	p.A495	0.008	pirsf_Saposin_chordata,pfam_SapA,smart_SapA,prints_Saposin,pfscan_SapA	pirsf_Saposin_chordata,pfam_SapA,pfam_SapB_1,pfam_SapB_2,superfamily_Saposin-like,smart_SapA,smart_SaposinB,prints_Saposin,pfscan_SapA,pfscan_SaposinB	-	no_errors	PSAPL1	HGNC	ENSG00000178597				10	0	0	10	4	28.5714
AFAP1	0	genome.wustl.edu	37	4	7802370	7802370	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	7802370	7802370	G	A	SNP	AFAP1	ENST00000420658	human	ensembl	74_37	-1	known	silent	c.1065	p.N355	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1	HGNC	ENSG00000196526				41	0	0	29	10	25.641
FAM175A	0	genome.wustl.edu	37	4	84406227	84406227	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	84406227	84406227	C	T	SNP	FAM175A	ENST00000503217	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.972	-	-	-	no_errors	FAM175A	HGNC	ENSG00000163322				22	0	0	35	4	10.2564
HERC6	0	genome.wustl.edu	37	4	89326038	89326038	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	89326038	89326038	C	G	SNP	HERC6	ENST00000264346	human	ensembl	74_37	+1	known	missense	c.1103	p.S368C	0.001	superfamily_RCC1/BLIP-II	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC6	HGNC	ENSG00000138642				50	0	0	70	26	27.0833
GRID2	0	genome.wustl.edu	37	4	94032033	94032033	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	94032033	94032033	C	T	SNP	GRID2	ENST00000282020	human	ensembl	74_37	+1	known	missense	c.664	p.R222C	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208				84	0	0	143	51	26.2887
TMEM175	0	genome.wustl.edu	37	4	941650	941650	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	941650	941650	C	T	SNP	TMEM175	ENST00000264771	human	ensembl	74_37	+1	known	silent	c.123	p.D41	0.335	pfam_DUF1211_TMEM175	pfam_DUF1211_TMEM175	-	no_errors	TMEM175	HGNC	ENSG00000127419				83	0	0	63	17	21.25
ENSG00000248968	0	genome.wustl.edu	37	5	10250009	10250009	+	RNA	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	10250009	10250009	T	A	SNP	ENSG00000248968	ENST00000509915	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CTD-2256P15.1	Clone_based_vega_gene	ENSG00000248968				29	0	0	37	12	24.4898
DAP	0	genome.wustl.edu	37	5	10681222	10681222	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	10681222	10681222	G	A	SNP	DAP	ENST00000432074	human	ensembl	74_37	-1	putative	missense	c.212	p.P71L	1.000	NULL	NULL	-	no_errors	DAP	HGNC	ENSG00000112977				24	0	0	17	7	29.1667
WDR36	0	genome.wustl.edu	37	5	110446870	110446870	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	110446870	110446870	G	A	SNP	WDR36	ENST00000506538	human	ensembl	74_37	+1	known	missense	c.1777	p.G593S	1.000	superfamily_Quinonprotein_ADH-like_supfam,pfscan_WD40_repeat_dom	pfam_SSU_processome_Utp21,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR36	HGNC	ENSG00000134987				158	0	0	366	89	19.5604
CTNND2	0	genome.wustl.edu	37	5	11082891	11082891	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	11082891	11082891	C	T	SNP	CTNND2	ENST00000304623	human	ensembl	74_37	-1	known	missense	c.2705	p.R902Q	1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND2	HGNC	ENSG00000169862				114	0	0	109	43	28.2895
APC	0	genome.wustl.edu	37	5	112175150	112175150	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	112175150	112175150	A	C	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.3859	p.I1287L	1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				33	0	0	58	24	29.2683
APC	0	genome.wustl.edu	37	5	112178805	112178805	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	112178805	112178805	G	A	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.7514	p.R2505Q	1.000	pfam_APC_basic_dom	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				84	0	0	110	45	29.0323
MCC	0	genome.wustl.edu	37	5	112364669	112364669	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	112364669	112364669	T	C	SNP	MCC	ENST00000302475	human	ensembl	74_37	-1	known	silent	c.2271	p.Q757	0.999	pfam_USH1C-bd_PDZ_domain	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm	-	no_errors	MCC	HGNC	ENSG00000171444				211	0	0	223	70	23.8908
ZNF474	0	genome.wustl.edu	37	5	121488178	121488178	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	121488178	121488178	C	A	SNP	ZNF474	ENST00000296600	human	ensembl	74_37	+1	known	missense	c.493	p.L165M	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF474	HGNC	ENSG00000164185				61	0	0	56	21	27.2727
MEGF10	0	genome.wustl.edu	37	5	126776468	126776468	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	126776468	126776468	G	A	SNP	MEGF10	ENST00000274473	human	ensembl	74_37	+1	known	silent	c.2271	p.L757	0.914	smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF_laminin,pfam_EGF_extracell,superfamily_Proteinase_amylase_inhib_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF10	HGNC	ENSG00000145794				110	1	0.900901	171	36	17.3913
SLC27A6	0	genome.wustl.edu	37	5	128359405	128359405	+	Splice_Site	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	128359405	128359405	T	C	SNP	SLC27A6	ENST00000262462	human	ensembl	74_37	+1	known	splice_site	c.1255+2	e6+2	1.000	-	-	-	no_errors	SLC27A6	HGNC	ENSG00000113396				19	0	0	46	11	19.2982
CHSY3	0	genome.wustl.edu	37	5	129241165	129241165	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	129241165	129241165	G	A	SNP	CHSY3	ENST00000305031	human	ensembl	74_37	+1	known	missense	c.643	p.G215S	0.002	pfam_Fringe-like	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY3	HGNC	ENSG00000198108				43	0	0	46	17	26.9841
ACSL6	0	genome.wustl.edu	37	5	131305865	131305865	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	131305865	131305865	C	T	SNP	ACSL6	ENST00000296869	human	ensembl	74_37	-1	known	missense	c.1463	p.C488Y	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL6	HGNC	ENSG00000164398				179	0	0	172	47	21.4612
RAD50	0	genome.wustl.edu	37	5	131911487	131911487	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	131911487	131911487	G	A	SNP	RAD50	ENST00000265335	human	ensembl	74_37	+1	known	missense	c.232	p.V78M	1.000	superfamily_P-loop_NTPase,tigrfam_Rad50_eukaryotes	pfam_Rad50_Zn_hook,superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	-	no_errors	RAD50	HGNC	ENSG00000113522				67	0	0	97	18	15.6522
AFF4	0	genome.wustl.edu	37	5	132270345	132270345	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	132270345	132270345	C	T	SNP	AFF4	ENST00000265343	human	ensembl	74_37	-1	known	missense	c.412	p.A138T	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF4	HGNC	ENSG00000072364				121	0	0	112	50	30.8642
CATSPER3	0	genome.wustl.edu	37	5	134305722	134305722	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	134305722	134305722	G	A	SNP	CATSPER3	ENST00000282611	human	ensembl	74_37	+1	known	silent	c.192	p.A64	0.599	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER3	HGNC	ENSG00000152705				275	0	0	245	83	25.3049
CATSPER3	0	genome.wustl.edu	37	5	134346089	134346089	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	134346089	134346089	T	C	SNP	CATSPER3	ENST00000282611	human	ensembl	74_37	+1	known	silent	c.963	p.S321	0.148	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER3	HGNC	ENSG00000152705				109	0	0	116	31	21.0884
DNAH5	0	genome.wustl.edu	37	5	13735996	13735996	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	13735996	13735996	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.11501	p.R3834H	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				63	0	0	114	25	17.9856
EGR1	0	genome.wustl.edu	37	5	137803102	137803102	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	137803102	137803102	C	T	SNP	EGR1	ENST00000239938	human	ensembl	74_37	+1	known	missense	c.964	p.R322C	1.000	NULL	pfam_DUF3432,pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR1	HGNC	ENSG00000120738				240	0	0	227	74	24.5847
SIL1	0	genome.wustl.edu	37	5	138287504	138287504	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	138287504	138287504	C	T	SNP	SIL1	ENST00000265195	human	ensembl	74_37	-1	known	silent	c.837	p.T279	0.381	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	SIL1	HGNC	ENSG00000120725				140	0	0	132	31	19.0184
CXXC5	0	genome.wustl.edu	37	5	139060917	139060917	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	139060917	139060917	G	A	SNP	CXXC5	ENST00000302517	human	ensembl	74_37	+1	known	missense	c.809	p.R270Q	1.000	pfam_Znf_CXXC,pfscan_Znf_CXXC	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	CXXC5	HGNC	ENSG00000171604				213	0	0	208	55	20.9125
PCDHA2	0	genome.wustl.edu	37	5	140176951	140176951	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140176951	140176951	T	C	SNP	PCDHA2	ENST00000378132	human	ensembl	74_37	+1	known	missense	c.2402	p.L801P	0.001	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969				60	0	0	48	19	28.3582
PCDHA5	0	genome.wustl.edu	37	5	140202504	140202504	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140202504	140202504	G	A	SNP	PCDHA5	ENST00000529859	human	ensembl	74_37	+1	known	missense	c.1144	p.G382R	0.981	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA5	HGNC	ENSG00000204965				176	0	0	184	52	22.0339
ENSG00000249034	0	genome.wustl.edu	37	5	140242763	140242763	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140242763	140242763	C	A	SNP	ENSG00000249034	ENST00000502505	human	ensembl	74_37	-1	known	silent	c.213	p.T71	0.004	NULL	NULL	-	no_errors	AC005609.1	Clone_based_ensembl_gene	ENSG00000249034				31	0	0	48	14	22.5806
PCDHAC2	0	genome.wustl.edu	37	5	140346615	140346615	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140346615	140346615	C	T	SNP	PCDHAC2	ENST00000289269	human	ensembl	74_37	+1	known	silent	c.264	p.R88	0.212	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC2	HGNC	ENSG00000243232				40	0	0	61	4	6.15385
PCDHB8	0	genome.wustl.edu	37	5	140558711	140558711	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140558711	140558711	G	A	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	missense	c.1096	p.V366I	0.994	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322				816	0	0	923	79	7.88423
PCDHB16	0	genome.wustl.edu	37	5	140564305	140564305	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140564305	140564305	G	A	SNP	PCDHB16	ENST00000361016	human	ensembl	74_37	+1	known	missense	c.2171	p.R724H	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963				238	0	0	215	70	24.5614
SLC25A2	0	genome.wustl.edu	37	5	140683317	140683317	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140683317	140683317	G	A	SNP	SLC25A2	ENST00000239451	human	ensembl	74_37	-1	known	missense	c.116	p.T39M	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A2	HGNC	ENSG00000120329				115	0	0	150	11	6.8323
PCDHGA1	0	genome.wustl.edu	37	5	140712162	140712162	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140712162	140712162	G	A	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	silent	c.1911	p.A637	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956				109	0	0	138	16	10.3896
PCDHGA5	0	genome.wustl.edu	37	5	140745766	140745766	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140745766	140745766	G	A	SNP	PCDHGA5	ENST00000518069	human	ensembl	74_37	+1	known	silent	c.1869	p.T623	0.005	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA5	HGNC	ENSG00000253485				150	0	0	172	43	20
PCDHGA10	0	genome.wustl.edu	37	5	140792807	140792807	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140792807	140792807	T	A	SNP	PCDHGA10	ENST00000398610	human	ensembl	74_37	+1	known	missense	c.65	p.L22H	0.019	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA10	HGNC	ENSG00000253846				71	0	0	88	33	27.2727
PCDHGA10	0	genome.wustl.edu	37	5	140794633	140794633	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140794633	140794633	C	T	SNP	PCDHGA10	ENST00000398610	human	ensembl	74_37	+1	known	missense	c.1891	p.R631C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA10	HGNC	ENSG00000253846				115	0	0	145	28	16.185
PCDH1	0	genome.wustl.edu	37	5	141243184	141243184	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	141243184	141243184	C	A	SNP	PCDH1	ENST00000287008	human	ensembl	74_37	-1	known	missense	c.2712	p.K904N	1.000	pfam_Protocadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH1	HGNC	ENSG00000156453				249	0	0	224	78	25.8278
ARHGAP26	0	genome.wustl.edu	37	5	142273906	142273906	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	142273906	142273906	T	G	SNP	ARHGAP26	ENST00000274498	human	ensembl	74_37	+1	known	missense	c.590	p.V197G	1.000	pfam_IRSp53/MIM_homology_IMD	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_IRSp53/MIM_homology_IMD,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_RhoGAP_dom,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP26	HGNC	ENSG00000145819				42	0	0	47	17	26.5625
PDGFRB	0	genome.wustl.edu	37	5	149498404	149498404	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	149498404	149498404	A	G	SNP	PDGFRB	ENST00000261799	human	ensembl	74_37	-1	known	missense	c.2810	p.M937T	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRB	HGNC	ENSG00000113721				139	0	0	126	16	11.2676
CAMK2A	0	genome.wustl.edu	37	5	149602647	149602647	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	149602647	149602647	G	A	SNP	CAMK2A	ENST00000398376	human	ensembl	74_37	-1	known	silent	c.1371	p.T457	0.515	pfam_Ca/CaM-dep_prot_kinase-assoc,superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2A	HGNC	ENSG00000070808				127	0	0	128	42	24.7059
FAT2	0	genome.wustl.edu	37	5	150946634	150946634	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	150946634	150946634	G	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.1859	p.S620F	0.990	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570				151	0	0	130	33	20.2454
HAVCR1	0	genome.wustl.edu	37	5	156482260	156482260	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	156482260	156482260	C	T	SNP	HAVCR1	ENST00000425854	human	ensembl	74_37	-1	known	missense	c.331	p.G111R	0.941	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	HAVCR1	HGNC	ENSG00000113249				124	0	0	114	38	25
CYFIP2	0	genome.wustl.edu	37	5	156747709	156747709	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	156747709	156747709	C	T	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	nonsense	c.1570	p.R524*	0.979	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP2	HGNC	ENSG00000055163				54	0	0	55	7	11.2903
PWWP2A	0	genome.wustl.edu	37	5	159520917	159520917	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	159520917	159520917	G	A	SNP	PWWP2A	ENST00000307063	human	ensembl	74_37	-1	known	missense	c.740	p.P247L	0.001	NULL	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	PWWP2A	HGNC	ENSG00000170234				101	0	0	131	25	16.0256
CCNJL	0	genome.wustl.edu	37	5	159680793	159680793	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	159680793	159680793	G	A	SNP	CCNJL	ENST00000393977	human	ensembl	74_37	-1	known	silent	c.900	p.N300	0.020	pfam_Cyclin_C-dom,superfamily_Cyclin-like	pfam_Cyclin_C-dom,pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNJL	HGNC	ENSG00000135083				69	0	0	59	17	22.3684
ENSG00000241956	0	genome.wustl.edu	37	5	164028132	164028132	+	RNA	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	164028132	164028132	A	G	SNP	ENSG00000241956	ENST00000486913	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTC-340A15.2	Clone_based_vega_gene	ENSG00000241956				14	0	0	14	5	26.3158
GPRIN1	0	genome.wustl.edu	37	5	176024847	176024847	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	176024847	176024847	T	C	SNP	GPRIN1	ENST00000303991	human	ensembl	74_37	-1	known	silent	c.1989	p.T663	0.000	NULL	NULL	-	no_errors	GPRIN1	HGNC	ENSG00000169258				61	0	0	56	24	30
GPRIN1	0	genome.wustl.edu	37	5	176025084	176025084	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	176025084	176025084	C	T	SNP	GPRIN1	ENST00000303991	human	ensembl	74_37	-1	known	silent	c.1752	p.P584	0.000	NULL	NULL	-	no_errors	GPRIN1	HGNC	ENSG00000169258				136	0	0	127	40	23.9521
FGFR4	0	genome.wustl.edu	37	5	176523313	176523313	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	176523313	176523313	C	T	SNP	FGFR4	ENST00000292408	human	ensembl	74_37	+1	known	missense	c.1970	p.A657V	1.000	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR4	HGNC	ENSG00000160867				105	0	0	79	27	25.4717
LMAN2	0	genome.wustl.edu	37	5	176765576	176765576	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	176765576	176765576	C	T	SNP	LMAN2	ENST00000303127	human	ensembl	74_37	-1	known	missense	c.346	p.V116I	0.994	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	-	no_errors	LMAN2	HGNC	ENSG00000169223				326	0	0	340	88	20.5607
TRIM7	0	genome.wustl.edu	37	5	180622450	180622450	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	180622450	180622450	C	T	SNP	TRIM7	ENST00000274773	human	ensembl	74_37	-1	known	missense	c.1252	p.V418M	0.989	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin,prints_Znf_B-box_chordata	-	no_errors	TRIM7	HGNC	ENSG00000146054				22	0	0	19	13	40.625
PDZD2	0	genome.wustl.edu	37	5	31799500	31799500	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	31799500	31799500	A	G	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.145	p.N49D	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				205	1	0.485437	201	52	20.5534
PDZD2	0	genome.wustl.edu	37	5	32048734	32048734	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	32048734	32048734	C	T	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	nonsense	c.1609	p.R537*	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				77	0	0	73	20	21.5054
IRX1	0	genome.wustl.edu	37	5	3601109	3601109	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	3601109	3601109	G	A	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	silent	c.1398	p.P466	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549				104	0	0	119	42	26.087
ADAMTS16	0	genome.wustl.edu	37	5	5303789	5303789	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	5303789	5303789	C	T	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	silent	c.3096	p.S1032	0.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536				48	0	0	43	11	20.3704
SKIV2L2	0	genome.wustl.edu	37	5	54696084	54696084	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	54696084	54696084	C	T	SNP	SKIV2L2	ENST00000230640	human	ensembl	74_37	+1	known	silent	c.2316	p.D772	1.000	pirsf_RNA_helicase_ATP-dep_SK12/DOB1	pfam_DSH_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pirsf_RNA_helicase_ATP-dep_SK12/DOB1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SKIV2L2	HGNC	ENSG00000039123				57	0	0	56	24	30
MAP3K1	0	genome.wustl.edu	37	5	56179395	56179395	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	56179395	56179395	G	A	SNP	MAP3K1	ENST00000399503	human	ensembl	74_37	+1	novel	silent	c.3708	p.P1236	0.752	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015				71	0	0	105	37	26.0563
ARHGEF28	0	genome.wustl.edu	37	5	73045775	73045775	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	73045775	73045775	C	T	SNP	ARHGEF28	ENST00000545377	human	ensembl	74_37	+1	known	silent	c.147	p.R49	0.009	NULL	pfam_DH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF28	HGNC	ENSG00000214944				127	0	0	118	40	25.3165
F2R	0	genome.wustl.edu	37	5	76012518	76012518	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	76012518	76012518	G	A	SNP	F2R	ENST00000505600	human	ensembl	74_37	+1	putative	missense	c.238	p.V80I	0.000	NULL	NULL	-	no_errors	F2R	HGNC	ENSG00000181104				30	0	0	25	3	10.7143
CMYA5	0	genome.wustl.edu	37	5	79089347	79089347	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	79089347	79089347	C	T	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	silent	c.11877	p.L3959	0.932	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309				59	0	0	78	24	23.5294
ZFYVE16	0	genome.wustl.edu	37	5	79746297	79746297	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	79746297	79746297	T	C	SNP	ZFYVE16	ENST00000338008	human	ensembl	74_37	+1	known	silent	c.3274	p.L1092	0.997	pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE16	HGNC	ENSG00000039319				105	0	0	125	46	26.9006
RASGRF2	0	genome.wustl.edu	37	5	80256573	80256573	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	80256573	80256573	C	T	SNP	RASGRF2	ENST00000265080	human	ensembl	74_37	+1	known	missense	c.16	p.R6C	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF2	HGNC	ENSG00000113319				15	0	0	17	8	32
TMEM167A	0	genome.wustl.edu	37	5	82352827	82352827	+	RNA	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	82352827	82352827	C	A	SNP	TMEM167A	ENST00000503892	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.571	-	-	-	no_errors	TMEM167A	HGNC	ENSG00000174695				17	0	0	52	21	28.7671
HAPLN1	0	genome.wustl.edu	37	5	82940461	82940461	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	82940461	82940461	G	A	SNP	HAPLN1	ENST00000274341	human	ensembl	74_37	-1	known	nonsense	c.496	p.R166*	0.995	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like_dom,prints_Link	-	no_errors	HAPLN1	HGNC	ENSG00000145681				44	0	0	47	16	25.3968
RASA1	0	genome.wustl.edu	37	5	86668007	86668007	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	86668007	86668007	C	T	SNP	RASA1	ENST00000274376	human	ensembl	74_37	+1	known	missense	c.1771	p.R591C	1.000	NULL	pfam_SH2,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH2,smart_SH3_domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_RasGAP,prints_SH2	-	no_errors	RASA1	HGNC	ENSG00000145715				52	0	0	90	24	21.0526
MEF2C	0	genome.wustl.edu	37	5	88025035	88025035	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	88025035	88025035	C	T	SNP	MEF2C	ENST00000437473	human	ensembl	74_37	-1	known	missense	c.964	p.E322K	1.000	NULL	pfam_TF_MADSbox,pfam_HJURP_C,superfamily_TF_MADSbox,smart_TF_MADSbox,prints_TF_MADSbox,pfscan_TF_MADSbox	-	no_errors	MEF2C	HGNC	ENSG00000081189				23	0	0	53	20	27.3973
SEMA5A	0	genome.wustl.edu	37	5	9052130	9052130	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	9052130	9052130	C	T	SNP	SEMA5A	ENST00000382496	human	ensembl	74_37	-1	known	silent	c.2700	p.S900	0.008	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902				32	0	0	28	15	34.8837
RTN4IP1	0	genome.wustl.edu	37	6	107035691	107035691	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	107035691	107035691	C	T	SNP	RTN4IP1	ENST00000369063	human	ensembl	74_37	-1	known	missense	c.853	p.A285T	1.000	pfam_ADH_C,smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	RTN4IP1	HGNC	ENSG00000130347				58	0	0	65	25	27.7778
SYCP2L	0	genome.wustl.edu	37	6	10902994	10902994	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	10902994	10902994	A	T	SNP	SYCP2L	ENST00000283141	human	ensembl	74_37	+1	known	missense	c.551	p.E184V	1.000	NULL	NULL	-	no_errors	SYCP2L	HGNC	ENSG00000153157				70	0	0	64	19	22.8916
CDC40	0	genome.wustl.edu	37	6	110538952	110538952	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	110538952	110538952	C	T	SNP	CDC40	ENST00000307731	human	ensembl	74_37	+1	known	nonsense	c.1036	p.Q346*	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CDC40	HGNC	ENSG00000168438				54	0	0	66	10	13.1579
METTL24	0	genome.wustl.edu	37	6	110620349	110620349	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	110620349	110620349	C	A	SNP	METTL24	ENST00000338882	human	ensembl	74_37	-1	known	nonsense	c.562	p.G188*	1.000	NULL	NULL	-	no_errors	METTL24	HGNC	ENSG00000053328				41	0	0	51	24	32
FYN	0	genome.wustl.edu	37	6	111983105	111983105	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	111983105	111983105	C	A	SNP	FYN	ENST00000354650	human	ensembl	74_37	-1	known	missense	c.1451	p.R484M	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	FYN	HGNC	ENSG00000010810				234	0	0	191	65	25.3906
GOPC	0	genome.wustl.edu	37	6	117884469	117884469	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	117884469	117884469	C	T	SNP	GOPC	ENST00000368498	human	ensembl	74_37	-1	known	missense	c.1337	p.G446D	0.983	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GOPC	HGNC	ENSG00000047932				59	0	0	158	51	24.4019
TPD52L1	0	genome.wustl.edu	37	6	125541338	125541338	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	125541338	125541338	A	G	SNP	TPD52L1	ENST00000534000	human	ensembl	74_37	+1	known	missense	c.134	p.Q45R	1.000	pfam_TPD52	pfam_TPD52	-	no_errors	TPD52L1	HGNC	ENSG00000111907				23	0	0	48	21	30.4348
LAMA2	0	genome.wustl.edu	37	6	129785509	129785509	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	129785509	129785509	G	A	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	missense	c.7067	p.R2356H	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569				40	0	0	211	65	23.5507
GFOD1	0	genome.wustl.edu	37	6	13365583	13365583	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	13365583	13365583	C	T	SNP	GFOD1	ENST00000379287	human	ensembl	74_37	-1	known	missense	c.565	p.G189S	1.000	pfam_OxRdtase_C	pfam_Oxidoreductase_N,pfam_OxRdtase_C	-	no_errors	GFOD1	HGNC	ENSG00000145990				57	0	0	54	19	26.0274
HBS1L	0	genome.wustl.edu	37	6	135317929	135317929	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	135317929	135317929	G	A	SNP	HBS1L	ENST00000367837	human	ensembl	74_37	-1	known	silent	c.951	p.G317	0.064	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_HBS1-like_N,pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom	-	no_errors	HBS1L	HGNC	ENSG00000112339				154	0	0	315	53	14.4022
MAP7	0	genome.wustl.edu	37	6	136687112	136687112	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	136687112	136687112	G	A	SNP	MAP7	ENST00000454590	human	ensembl	74_37	-1	known	missense	c.1100	p.P367L	0.969	NULL	pfam_MAP7	-	no_errors	MAP7	HGNC	ENSG00000135525				87	0	0	96	21	17.9487
IL20RA	0	genome.wustl.edu	37	6	137322794	137322794	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	137322794	137322794	G	T	SNP	IL20RA	ENST00000316649	human	ensembl	74_37	-1	known	silent	c.1563	p.L521	0.843	NULL	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3	-	no_errors	IL20RA	HGNC	ENSG00000016402				165	0	0	182	64	26.0163
GRM1	0	genome.wustl.edu	37	6	146720132	146720132	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	146720132	146720132	A	G	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.1957	p.T653A	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				394	0	0	446	143	24.2784
GRM1	0	genome.wustl.edu	37	6	146755775	146755775	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	146755775	146755775	C	A	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.3428	p.P1143H	0.959	prints_GPCR_3_mtglu_rcpt_1	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				84	0	0	87	37	29.8387
STXBP5	0	genome.wustl.edu	37	6	147637446	147637446	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	147637446	147637446	G	A	SNP	STXBP5	ENST00000321680	human	ensembl	74_37	+1	known	missense	c.1705	p.V569M	0.299	superfamily_WD40_repeat_dom	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C_dom,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5	HGNC	ENSG00000164506				39	0	0	82	25	23.3645
UST	0	genome.wustl.edu	37	6	149285641	149285641	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	149285641	149285641	G	A	SNP	UST	ENST00000367463	human	ensembl	74_37	+1	known	missense	c.623	p.R208K	1.000	pfam_Sulfotransferase,pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	pfam_Sulfotransferase,pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	UST	HGNC	ENSG00000111962				103	0	0	88	27	23.4783
JARID2	0	genome.wustl.edu	37	6	15497312	15497312	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	15497312	15497312	G	A	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	missense	c.1856	p.R619Q	1.000	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				13	0	0	25	4	13.7931
PARK2	0	genome.wustl.edu	37	6	161990428	161990428	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	161990428	161990428	T	A	SNP	PARK2	ENST00000366898	human	ensembl	74_37	-1	known	missense	c.892	p.I298F	1.000	pirsf_Parkin	pfam_Ubiquitin_dom,pfam_Znf_C6HC,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,smart_Znf_C6HC,pirsf_Parkin,pfscan_Ubiquitin_supergroup,prints_Parkin,prints_Ubiquitin	-	no_errors	PARK2	HGNC	ENSG00000185345				54	0	0	62	16	20.5128
THBS2	0	genome.wustl.edu	37	6	169629684	169629684	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	169629684	169629684	C	T	SNP	THBS2	ENST00000366787	human	ensembl	74_37	-1	known	missense	c.2242	p.G748S	1.000	pfam_Thrombospondin_3-like_rpt	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS2	HGNC	ENSG00000186340				175	0	0	171	52	23.3184
THBS2	0	genome.wustl.edu	37	6	169632789	169632789	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	169632789	169632789	G	A	SNP	THBS2	ENST00000366787	human	ensembl	74_37	-1	known	silent	c.1902	p.V634	0.703	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS2	HGNC	ENSG00000186340				128	1	0.775194	139	34	19.6532
DLL1	0	genome.wustl.edu	37	6	170592160	170592160	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	170592160	170592160	C	T	SNP	DLL1	ENST00000366756	human	ensembl	74_37	-1	known	silent	c.2082	p.S694	0.000	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	DLL1	HGNC	ENSG00000198719				271	0	0	232	84	26.5823
GPLD1	0	genome.wustl.edu	37	6	24448144	24448144	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	24448144	24448144	C	T	SNP	GPLD1	ENST00000230036	human	ensembl	74_37	-1	known	missense	c.1639	p.V547M	0.997	smart_Int_alpha_beta-p	pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Gprt_PLipase_D	-	no_errors	GPLD1	HGNC	ENSG00000112293				53	0	0	55	16	22.5352
GPLD1	0	genome.wustl.edu	37	6	24450073	24450073	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	24450073	24450073	C	T	SNP	GPLD1	ENST00000230036	human	ensembl	74_37	-1	known	missense	c.1390	p.V464M	0.001	pfam_FG-GAP,smart_Int_alpha_beta-p	pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Gprt_PLipase_D	-	no_errors	GPLD1	HGNC	ENSG00000112293				147	0	0	149	38	20.3209
FAM65B	0	genome.wustl.edu	37	6	24873113	24873113	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	24873113	24873113	C	T	SNP	FAM65B	ENST00000259698	human	ensembl	74_37	-1	known	missense	c.332	p.R111H	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FAM65B	HGNC	ENSG00000111913				50	0	0	63	15	19.2308
SCAND3	0	genome.wustl.edu	37	6	28540659	28540659	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	28540659	28540659	G	A	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	nonsense	c.3007	p.R1003*	0.999	superfamily_RNaseH-like_dom	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040				88	0	0	134	44	24.7191
ZNF311	0	genome.wustl.edu	37	6	28971699	28971699	+	RNA	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	28971699	28971699	T	C	SNP	ZNF311	ENST00000483450	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ZNF311	HGNC	ENSG00000197935				176	0	0	166	54	24.5455
OR14J1	0	genome.wustl.edu	37	6	29274617	29274617	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	29274617	29274617	C	T	SNP	OR14J1	ENST00000377160	human	ensembl	74_37	+1	known	missense	c.151	p.R51C	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14J1	HGNC	ENSG00000204695				182	0	0	264	94	26.257
OR2H1	0	genome.wustl.edu	37	6	29429649	29429649	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	29429649	29429649	T	C	SNP	OR2H1	ENST00000377132	human	ensembl	74_37	+1	known	silent	c.103	p.L35	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2H1	HGNC	ENSG00000204688				203	0	0	247	81	24.6951
OR2H1	0	genome.wustl.edu	37	6	29429651	29429651	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	29429651	29429651	G	A	SNP	OR2H1	ENST00000377132	human	ensembl	74_37	+1	known	silent	c.105	p.L35	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2H1	HGNC	ENSG00000204688				200	0	0	251	78	23.7082
OR2H1	0	genome.wustl.edu	37	6	29429657	29429657	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	29429657	29429657	G	A	SNP	OR2H1	ENST00000377132	human	ensembl	74_37	+1	known	silent	c.111	p.L37	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2H1	HGNC	ENSG00000204688				205	0	0	251	73	22.5309
PRR3	0	genome.wustl.edu	37	6	30529873	30529873	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	30529873	30529873	G	A	SNP	PRR3	ENST00000376560	human	ensembl	74_37	+1	known	silent	c.432	p.P144	0.109	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	PRR3	HGNC	ENSG00000204576				142	0	0	128	31	19.4969
MDC1	0	genome.wustl.edu	37	6	30671304	30671304	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	30671304	30671304	G	A	SNP	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	missense	c.5573	p.T1858I	0.001	NULL	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337				276	0	0	243	78	24.2991
VARS2	0	genome.wustl.edu	37	6	30887543	30887543	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	30887543	30887543	C	T	SNP	VARS2	ENST00000541562	human	ensembl	74_37	+1	known	silent	c.1173	p.H391	0.829	pfam_aa-tRNA-synth_Ia,superfamily_Val/Leu/Ile-tRNA-synth_edit,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	-	no_errors	VARS2	HGNC	ENSG00000137411				435	0	0	374	115	23.5174
CDSN	0	genome.wustl.edu	37	6	31088145	31088145	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	31088145	31088145	T	C	SNP	CDSN	ENST00000376288	human	ensembl	74_37	-1	known	missense	c.52	p.M18V	0.005	NULL	NULL	-	no_errors	CDSN	HGNC	ENSG00000204539				18	0	0	10	6	37.5
ZBTB12	0	genome.wustl.edu	37	6	31868847	31868847	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	31868847	31868847	C	T	SNP	ZBTB12	ENST00000375527	human	ensembl	74_37	-1	known	missense	c.236	p.R79H	0.004	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB12	HGNC	ENSG00000204366				75	0	0	87	26	23.0088
GRM4	0	genome.wustl.edu	37	6	34029714	34029714	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	34029714	34029714	C	T	SNP	GRM4	ENST00000374181	human	ensembl	74_37	-1	known	silent	c.828	p.S276	0.373	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_4,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM4	HGNC	ENSG00000124493				123	0	0	126	34	21.25
HMGA1	0	genome.wustl.edu	37	6	34210525	34210525	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	34210525	34210525	C	T	SNP	HMGA1	ENST00000395004	human	ensembl	74_37	+1	known	missense	c.172	p.R58W	1.000	prints_HMGI/HMGY,prints_AT_hook-like	prints_HMGI/HMGY,prints_AT_hook-like	-	no_errors	HMGA1	HGNC	ENSG00000137309				9	0	0	17	5	22.7273
ZNF76	0	genome.wustl.edu	37	6	35259413	35259413	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	35259413	35259413	G	A	SNP	ZNF76	ENST00000373953	human	ensembl	74_37	+1	known	missense	c.830	p.R277H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF76	HGNC	ENSG00000065029				85	0	0	124	8	6.06061
COX6A1P2	0	genome.wustl.edu	37	6	37012771	37012771	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	37012771	37012771	G	A	SNP	COX6A1P2	ENST00000423336	human	ensembl	74_37	+1	known	missense	c.136	p.A46T	0.889	pfam_Cyt_c_oxidase_su6a,superfamily_Cyt_c_oxidase_su6a,pirsf_Cyt_c_oxidase_su6a	pfam_Cyt_c_oxidase_su6a,superfamily_Cyt_c_oxidase_su6a,pirsf_Cyt_c_oxidase_su6a	-	no_errors	COX6A1P2	HGNC	ENSG00000226976				47	0	0	41	23	35.9375
MOCS1	0	genome.wustl.edu	37	6	39874786	39874786	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	39874786	39874786	C	T	SNP	MOCS1	ENST00000340692	human	ensembl	74_37	-1	known	missense	c.1258	p.V420M	0.000	NULL	pfam_Mopterin_CF_biosynth-C_dom,pfam_Mob_synth_C,pfam_rSAM,superfamily_Mopterin_CF_biosynth-C_dom,smart_Elp3/MiaB/NifB,tigrfam_MoaA,tigrfam_Mo_CF_biosynth-C	-	no_errors	MOCS1	HGNC	ENSG00000124615				146	0	0	123	42	25.4545
USP49	0	genome.wustl.edu	37	6	41774419	41774419	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	41774419	41774419	C	T	SNP	USP49	ENST00000373009	human	ensembl	74_37	-1	known	silent	c.303	p.A101	0.247	NULL	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP49	HGNC	ENSG00000164663				154	0	0	124	41	24.8485
CUL7	0	genome.wustl.edu	37	6	43019980	43019980	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	43019980	43019980	G	A	SNP	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	missense	c.703	p.R235W	1.000	superfamily_ARM-type_fold	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090				60	0	0	52	25	32.4675
TMEM63B	0	genome.wustl.edu	37	6	44116118	44116118	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	44116118	44116118	G	A	SNP	TMEM63B	ENST00000259746	human	ensembl	74_37	+1	known	missense	c.1117	p.A373T	1.000	pfam_DUF221	pfam_DUF221	-	no_errors	TMEM63B	HGNC	ENSG00000137216				187	0	0	132	31	19.0184
TMEM63B	0	genome.wustl.edu	37	6	44122159	44122159	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	44122159	44122159	G	A	SNP	TMEM63B	ENST00000259746	human	ensembl	74_37	+1	known	missense	c.2284	p.A762T	0.415	NULL	pfam_DUF221	-	no_errors	TMEM63B	HGNC	ENSG00000137216				110	0	0	106	26	19.697
RHAG	0	genome.wustl.edu	37	6	49586939	49586939	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	49586939	49586939	C	A	SNP	RHAG	ENST00000371175	human	ensembl	74_37	-1	known	missense	c.294	p.Q98H	0.978	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHAG	HGNC	ENSG00000112077				81	0	0	71	24	25.2632
GSTA1	0	genome.wustl.edu	37	6	52661013	52661013	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	52661013	52661013	T	C	SNP	GSTA1	ENST00000334575	human	ensembl	74_37	-1	known	missense	c.239	p.N80S	1.000	superfamily_Thioredoxin-like_fold	pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_GST_alpha	-	no_errors	GSTA1	HGNC	ENSG00000243955				258	0	0	372	118	24.0816
FAM83B	0	genome.wustl.edu	37	6	54805455	54805455	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	54805455	54805455	C	T	SNP	FAM83B	ENST00000306858	human	ensembl	74_37	+1	known	silent	c.1686	p.G562	0.819	NULL	pfam_DUF1669	-	no_errors	FAM83B	HGNC	ENSG00000168143				24	0	0	65	23	26.1364
FAM83B	0	genome.wustl.edu	37	6	54805606	54805606	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	54805606	54805606	A	G	SNP	FAM83B	ENST00000306858	human	ensembl	74_37	+1	known	missense	c.1837	p.T613A	0.097	NULL	pfam_DUF1669	-	no_errors	FAM83B	HGNC	ENSG00000168143				43	0	0	101	34	25.1852
EXOC2	0	genome.wustl.edu	37	6	599180	599180	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	599180	599180	C	T	SNP	EXOC2	ENST00000230449	human	ensembl	74_37	-1	known	missense	c.788	p.R263Q	0.983	NULL	pfam_IPT,superfamily_Ig_E-set,superfamily_Cullin_repeat-like_dom	-	no_errors	EXOC2	HGNC	ENSG00000112685				273	1	0.364964	229	80	25.89
FAM135A	0	genome.wustl.edu	37	6	71162259	71162259	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	71162259	71162259	T	A	SNP	FAM135A	ENST00000418814	human	ensembl	74_37	+1	known	missense	c.142	p.L48M	1.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like,pfam_LACT/PDAT_acylTrfase	-	no_errors	FAM135A	HGNC	ENSG00000082269				40	0	0	43	11	20.3704
B3GAT2	0	genome.wustl.edu	37	6	71665875	71665875	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	71665875	71665875	C	T	SNP	B3GAT2	ENST00000230053	human	ensembl	74_37	-1	known	silent	c.258	p.T86	1.000	NULL	pfam_Glyco_trans_43	-	no_errors	B3GAT2	HGNC	ENSG00000112309				55	0	0	56	10	15.1515
EEF1A1	0	genome.wustl.edu	37	6	74228320	74228320	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	74228320	74228320	A	G	SNP	EEF1A1	ENST00000309268	human	ensembl	74_37	-1	known	silent	c.786	p.V262	0.969	pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_B-barrel,tigrfam_Transl_elong_EF1A_euk/arc	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom,tigrfam_Transl_elong_EF1A_euk/arc	-	no_errors	EEF1A1	HGNC	ENSG00000156508				101	0	0	121	43	26.2195
COL12A1	0	genome.wustl.edu	37	6	75839937	75839937	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	75839937	75839937	C	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.6080	p.G2027E	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				46	0	0	90	18	16.6667
IMPG1	0	genome.wustl.edu	37	6	76640734	76640734	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	76640734	76640734	G	A	SNP	IMPG1	ENST00000369950	human	ensembl	74_37	-1	known	missense	c.2179	p.P727S	0.002	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG1	HGNC	ENSG00000112706				104	0	0	124	38	23.4568
HTR1B	0	genome.wustl.edu	37	6	78172202	78172202	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	78172202	78172202	C	T	SNP	HTR1B	ENST00000369947	human	ensembl	74_37	-1	known	missense	c.919	p.A307T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT1B_rcpt,prints_5HT_rcpt,prints_ADR_fam	-	no_errors	HTR1B	HGNC	ENSG00000135312				301	0	0	401	64	13.7634
HTR1B	0	genome.wustl.edu	37	6	78172495	78172495	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	78172495	78172495	G	A	SNP	HTR1B	ENST00000369947	human	ensembl	74_37	-1	known	missense	c.626	p.T209M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT1B_rcpt,prints_5HT_rcpt,prints_ADR_fam	-	no_errors	HTR1B	HGNC	ENSG00000135312				64	0	0	71	26	26.8041
MDN1	0	genome.wustl.edu	37	6	90397120	90397120	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	90397120	90397120	C	A	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.11393	p.R3798L	1.000	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				98	0	0	81	17	17.3469
MDN1	0	genome.wustl.edu	37	6	90428683	90428683	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	90428683	90428683	G	A	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	silent	c.6124	p.L2042	1.000	superfamily_P-loop_NTPase,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				81	0	0	117	42	26.4151
CUX1	0	genome.wustl.edu	37	7	101755048	101755048	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	101755048	101755048	C	T	SNP	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	nonsense	c.634	p.Q212*	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923				40	0	0	36	11	23.4043
ARMC10	0	genome.wustl.edu	37	7	102738782	102738782	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	102738782	102738782	G	A	SNP	ARMC10	ENST00000323716	human	ensembl	74_37	+1	known	missense	c.814	p.V272I	0.025	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	ARMC10	HGNC	ENSG00000170632				35	0	0	51	13	20.3125
DPY19L2P2	0	genome.wustl.edu	37	7	102912190	102912190	+	RNA	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	102912190	102912190	T	G	SNP	DPY19L2P2	ENST00000312132	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DPY19L2P2	HGNC	ENSG00000170629				60	0	0	83	5	5.68182
DPY19L2P2	0	genome.wustl.edu	37	7	102912208	102912208	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	102912208	102912208	C	T	SNP	DPY19L2P2	ENST00000312132	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DPY19L2P2	HGNC	ENSG00000170629				59	0	0	87	5	5.43478
DPY19L2P2	0	genome.wustl.edu	37	7	102912302	102912302	+	RNA	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	102912302	102912302	A	G	SNP	DPY19L2P2	ENST00000312132	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	DPY19L2P2	HGNC	ENSG00000170629				27	0	0	60	6	9.09091
RELN	0	genome.wustl.edu	37	7	103163896	103163896	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	103163896	103163896	C	T	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.7432	p.G2478R	1.000	superfamily_Sialidases	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				162	0	0	199	53	21.0317
KMT2E	0	genome.wustl.edu	37	7	104681433	104681433	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	104681433	104681433	G	A	SNP	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	missense	c.34	p.A12T	1.000	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483				111	0	0	137	45	24.7253
FOXP2	0	genome.wustl.edu	37	7	114304351	114304351	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	114304351	114304351	A	G	SNP	FOXP2	ENST00000408937	human	ensembl	74_37	+1	known	silent	c.1938	p.L646	0.997	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP2	HGNC	ENSG00000128573				28	0	0	66	18	21.4286
THSD7A	0	genome.wustl.edu	37	7	11521445	11521445	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	11521445	11521445	G	A	SNP	THSD7A	ENST00000423059	human	ensembl	74_37	-1	known	nonsense	c.1987	p.R663*	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108				51	0	0	90	33	26.8293
SCIN	0	genome.wustl.edu	37	7	12668733	12668733	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	12668733	12668733	G	A	SNP	SCIN	ENST00000297029	human	ensembl	74_37	+1	known	missense	c.1205	p.R402H	1.000	smart_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	SCIN	HGNC	ENSG00000006747				38	0	0	62	19	23.4568
GCC1	0	genome.wustl.edu	37	7	127224963	127224963	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	127224963	127224963	C	T	SNP	GCC1	ENST00000321407	human	ensembl	74_37	-1	known	missense	c.274	p.E92K	1.000	NULL	pfam_GRIP,superfamily_ARM-type_fold,smart_GRIP,pfscan_GRIP	-	no_errors	GCC1	HGNC	ENSG00000179562				74	0	0	87	20	18.6916
SND1	0	genome.wustl.edu	37	7	127447556	127447556	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	127447556	127447556	C	T	SNP	SND1	ENST00000354725	human	ensembl	74_37	+1	known	missense	c.1171	p.R391C	1.000	pfam_Staphylococal_nuclease_OB-fold,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Staphylococal_nuclease_OB-fold	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157				93	0	0	113	32	22.069
LRRC4	0	genome.wustl.edu	37	7	127670140	127670140	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	127670140	127670140	T	A	SNP	LRRC4	ENST00000249363	human	ensembl	74_37	-1	known	missense	c.554	p.E185V	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4	HGNC	ENSG00000128594				112	0	0	133	26	16.3522
SMO	0	genome.wustl.edu	37	7	128845210	128845210	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	128845210	128845210	C	T	SNP	SMO	ENST00000249373	human	ensembl	74_37	+1	known	missense	c.704	p.A235V	1.000	pfam_Frizzled,pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,pfam_GPCR_2_secretin-like,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	SMO	HGNC	ENSG00000128602				26	0	0	34	14	29.1667
SMO	0	genome.wustl.edu	37	7	128845574	128845574	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	128845574	128845574	C	T	SNP	SMO	ENST00000249373	human	ensembl	74_37	+1	known	nonsense	c.871	p.R291*	1.000	pfam_Frizzled,pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,pfam_GPCR_2_secretin-like,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	SMO	HGNC	ENSG00000128602				88	0	0	86	33	27.7311
PLXNA4	0	genome.wustl.edu	37	7	132192529	132192529	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	132192529	132192529	G	A	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	silent	c.924	p.R308	0.964	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866				53	0	0	52	12	18.75
PLXNA4	0	genome.wustl.edu	37	7	132192530	132192530	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	132192530	132192530	C	A	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	missense	c.923	p.R308L	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866				52	0	0	53	12	18.4615
CALD1	0	genome.wustl.edu	37	7	134617839	134617839	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	134617839	134617839	C	T	SNP	CALD1	ENST00000361388	human	ensembl	74_37	+1	known	missense	c.319	p.R107C	1.000	pfam_Caldesmon_LSP	pfam_Caldesmon_LSP,prints_Caldesmon	-	no_errors	CALD1	HGNC	ENSG00000122786				50	0	0	50	15	23.0769
CALD1	0	genome.wustl.edu	37	7	134635160	134635160	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	134635160	134635160	G	A	SNP	CALD1	ENST00000361388	human	ensembl	74_37	+1	known	silent	c.1143	p.R381	1.000	pfam_Caldesmon_LSP	pfam_Caldesmon_LSP,prints_Caldesmon	-	no_errors	CALD1	HGNC	ENSG00000122786				56	0	0	68	22	24.4444
DENND2A	0	genome.wustl.edu	37	7	140285478	140285478	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	140285478	140285478	T	C	SNP	DENND2A	ENST00000275884	human	ensembl	74_37	-1	known	missense	c.1156	p.I386V	0.957	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2A	HGNC	ENSG00000146966				188	0	0	164	52	24.0741
SSBP1	0	genome.wustl.edu	37	7	141443711	141443711	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	141443711	141443711	G	A	SNP	SSBP1	ENST00000265304	human	ensembl	74_37	+1	known	missense	c.236	p.S79N	1.000	pfam_Primosome_PriB/ssb,superfamily_NA-bd_OB-fold,pfscan_Primosome_PriB/ssb,tigrfam_ssDNA-bd	pfam_Primosome_PriB/ssb,superfamily_NA-bd_OB-fold,pfscan_Primosome_PriB/ssb,tigrfam_ssDNA-bd	-	no_errors	SSBP1	HGNC	ENSG00000106028				88	0	0	61	18	22.7848
MGAM	0	genome.wustl.edu	37	7	141785651	141785651	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	141785651	141785651	A	G	SNP	MGAM	ENST00000475668	human	ensembl	74_37	+1	putative	missense	c.6526	p.I2176V	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335				32	0	0	62	13	17.3333
LOC154761	0	genome.wustl.edu	37	7	143510058	143510058	+	RNA	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	143510058	143510058	T	C	SNP	LOC154761	ENST00000481651	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-61L23.2	Clone_based_vega_gene	ENSG00000253882				115	0	0	134	14	9.45946
NOBOX	0	genome.wustl.edu	37	7	144098304	144098304	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	144098304	144098304	G	A	SNP	NOBOX	ENST00000467773	human	ensembl	74_37	-1	known	missense	c.679	p.R227C	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NOBOX	HGNC	ENSG00000106410				36	0	0	44	14	24.1379
ZNF777	0	genome.wustl.edu	37	7	149129019	149129019	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	149129019	149129019	C	T	SNP	ZNF777	ENST00000247930	human	ensembl	74_37	-1	known	missense	c.2344	p.E782K	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453				92	0	0	91	32	26.0163
ZNF777	0	genome.wustl.edu	37	7	149129035	149129035	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	149129035	149129035	C	T	SNP	ZNF777	ENST00000247930	human	ensembl	74_37	-1	known	silent	c.2328	p.R776	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453				94	0	0	105	13	11.0169
ZNF767	0	genome.wustl.edu	37	7	149255734	149255734	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	149255734	149255734	G	A	SNP	ZNF767	ENST00000463567	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	ZNF767	HGNC	ENSG00000133624				32	0	0	49	7	12.5
CDK5	0	genome.wustl.edu	37	7	150751541	150751541	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	150751541	150751541	G	A	SNP	CDK5	ENST00000485972	human	ensembl	74_37	-1	known	missense	c.662	p.T221M	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	CDK5	HGNC	ENSG00000164885				63	0	0	60	22	26.8293
SLC4A2	0	genome.wustl.edu	37	7	150771346	150771346	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	150771346	150771346	G	A	SNP	SLC4A2	ENST00000413384	human	ensembl	74_37	+1	known	missense	c.2756	p.R919H	1.000	pfam_HCO3_transpt_C,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_2,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A2	HGNC	ENSG00000164889				90	0	0	67	27	28.7234
KMT2C	0	genome.wustl.edu	37	7	151879075	151879075	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	151879075	151879075	G	A	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	missense	c.5870	p.T1957M	0.263	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				354	0	0	383	94	19.7065
HTR5A	0	genome.wustl.edu	37	7	154862909	154862909	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	154862909	154862909	C	T	SNP	HTR5A	ENST00000287907	human	ensembl	74_37	+1	known	silent	c.300	p.H100	0.863	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT5A_rcpt,prints_5HT_rcpt	-	no_errors	HTR5A	HGNC	ENSG00000157219				39	0	0	53	12	18.4615
CNPY1	0	genome.wustl.edu	37	7	155301590	155301590	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	155301590	155301590	G	A	SNP	CNPY1	ENST00000321736	human	ensembl	74_37	-1	putative	missense	c.143	p.A48V	1.000	pfam_DUF3456	pfam_DUF3456	-	no_errors	CNPY1	HGNC	ENSG00000146910				98	0	0	105	33	23.913
IQCE	0	genome.wustl.edu	37	7	2625867	2625867	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	2625867	2625867	G	A	SNP	IQCE	ENST00000402050	human	ensembl	74_37	+1	known	missense	c.850	p.A284T	0.000	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCE	HGNC	ENSG00000106012				60	0	0	53	24	31.1688
HOXA1	0	genome.wustl.edu	37	7	27135012	27135012	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	27135012	27135012	C	A	SNP	HOXA1	ENST00000343060	human	ensembl	74_37	-1	known	missense	c.520	p.A174S	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	HOXA1	HGNC	ENSG00000105991				188	0	0	168	72	30
HOXA13	0	genome.wustl.edu	37	7	27237864	27237864	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	27237864	27237864	T	C	SNP	HOXA13	ENST00000222753	human	ensembl	74_37	-1	known	missense	c.1120	p.R374G	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_HoxA13_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Antifreeze_1	-	no_errors	HOXA13	HGNC	ENSG00000106031				326	0	0	265	87	24.7159
CPVL	0	genome.wustl.edu	37	7	29134756	29134756	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	29134756	29134756	G	A	SNP	CPVL	ENST00000265394	human	ensembl	74_37	-1	known	missense	c.406	p.R136C	0.523	pfam_Peptidase_S10	pfam_Peptidase_S10,prints_Peptidase_S10	-	no_errors	CPVL	HGNC	ENSG00000106066				51	0	0	64	20	23.8095
CARD11	0	genome.wustl.edu	37	7	2953041	2953041	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	2953041	2953041	G	A	SNP	CARD11	ENST00000396946	human	ensembl	74_37	-1	known	missense	c.2899	p.R967C	0.993	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD	-	no_errors	CARD11	HGNC	ENSG00000198286				66	0	0	69	27	28.125
NOD1	0	genome.wustl.edu	37	7	30492371	30492371	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	30492371	30492371	G	A	SNP	NOD1	ENST00000222823	human	ensembl	74_37	-1	known	missense	c.662	p.T221M	0.096	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD1	HGNC	ENSG00000106100				93	0	0	100	31	23.6641
ADCYAP1R1	0	genome.wustl.edu	37	7	31124942	31124942	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	31124942	31124942	G	A	SNP	ADCYAP1R1	ENST00000304166	human	ensembl	74_37	+1	known	missense	c.554	p.R185H	0.995	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_PACAP_1_rcpt,prints_GPCR_2_secretin-like	-	no_errors	ADCYAP1R1	HGNC	ENSG00000078549				111	0	0	100	40	28.5714
SDK1	0	genome.wustl.edu	37	7	4011175	4011175	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	4011175	4011175	A	G	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.1792	p.T598A	0.906	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				26	0	0	23	4	14.8148
SDK1	0	genome.wustl.edu	37	7	4091419	4091419	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	4091419	4091419	C	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	silent	c.2868	p.D956	0.244	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				206	0	0	165	32	16.2437
GLI3	0	genome.wustl.edu	37	7	42005764	42005764	+	Silent	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	42005764	42005764	G	T	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	silent	c.2907	p.A969	0.514	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				14	0	0	18	11	37.931
HECW1	0	genome.wustl.edu	37	7	43484841	43484841	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	43484841	43484841	G	A	SNP	HECW1	ENST00000395891	human	ensembl	74_37	+1	known	silent	c.2070	p.T690	0.728	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW1	HGNC	ENSG00000002746				65	0	0	83	16	16.1616
ZMIZ2	0	genome.wustl.edu	37	7	44801116	44801116	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	44801116	44801116	C	T	SNP	ZMIZ2	ENST00000309315	human	ensembl	74_37	+1	known	missense	c.1309	p.R437C	1.000	NULL	pfam_Znf_MIZ,pfscan_Znf_MIZ	-	no_errors	ZMIZ2	HGNC	ENSG00000122515				91	0	0	82	26	24.0741
AP5Z1	0	genome.wustl.edu	37	7	4828500	4828500	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	4828500	4828500	C	A	SNP	AP5Z1	ENST00000348624	human	ensembl	74_37	+1	known	missense	c.1625	p.P542H	1.000	NULL	NULL	-	no_errors	AP5Z1	HGNC	ENSG00000242802				17	0	0	23	9	28.125
ZPBP	0	genome.wustl.edu	37	7	49977188	49977188	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	49977188	49977188	C	T	SNP	ZPBP	ENST00000046087	human	ensembl	74_37	-1	known	missense	c.992	p.R331H	0.834	pfam_Sp38-bd	pfam_Sp38-bd,pfscan_Ig-like_dom	-	no_errors	ZPBP	HGNC	ENSG00000042813				101	1	0.980392	140	37	20.904
GRB10	0	genome.wustl.edu	37	7	50683938	50683938	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	50683938	50683938	C	T	SNP	GRB10	ENST00000398812	human	ensembl	74_37	-1	known	missense	c.953	p.G318D	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB10	HGNC	ENSG00000106070				90	0	0	85	19	18.2692
LANCL2	0	genome.wustl.edu	37	7	55479657	55479657	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	55479657	55479657	T	C	SNP	LANCL2	ENST00000254770	human	ensembl	74_37	+1	known	missense	c.883	p.Y295H	1.000	pfam_LANC-like,superfamily_6-hairpin_glycosidase-like	pfam_LANC-like,superfamily_6-hairpin_glycosidase-like,prints_LanC-like_prot_euk,prints_LANC-like	-	no_errors	LANCL2	HGNC	ENSG00000132434				159	0	0	178	14	7.29167
ZNF713	0	genome.wustl.edu	37	7	55990944	55990944	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	55990944	55990944	C	T	SNP	ZNF713	ENST00000429591	human	ensembl	74_37	+1	known	silent	c.138	p.D46	0.992	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF713	HGNC	ENSG00000178665				102	0	0	110	45	29.0323
ENSG00000236299	0	genome.wustl.edu	37	7	63353759	63353759	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	63353759	63353759	G	A	SNP	ENSG00000236299	ENST00000596855	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	RP11-340I6.7	Clone_based_vega_gene	ENSG00000236299				118	0	0	133	43	24.4318
DAGLB	0	genome.wustl.edu	37	7	6474590	6474590	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	6474590	6474590	T	C	SNP	DAGLB	ENST00000297056	human	ensembl	74_37	-1	known	missense	c.481	p.K161E	0.979	NULL	pfam_Lipase_3	-	no_errors	DAGLB	HGNC	ENSG00000164535				155	0	0	162	48	22.8571
CCT6P1	0	genome.wustl.edu	37	7	65222986	65222986	+	RNA	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	65222986	65222986	G	T	SNP	CCT6P1	ENST00000442266	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	CCT6P1	HGNC	ENSG00000228409				19	0	0	8	6	42.8571
ASL	0	genome.wustl.edu	37	7	65557802	65557802	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	65557802	65557802	G	T	SNP	ASL	ENST00000304874	human	ensembl	74_37	+1	known	missense	c.1298	p.S433I	1.000	superfamily_L-Aspartase-like,tigrfam_Argininosuccinate_lyase	pfam_Fumarate_lyase_N,superfamily_L-Aspartase-like,prints_Fumarate_lyase_fam,tigrfam_Argininosuccinate_lyase	-	no_errors	ASL	HGNC	ENSG00000126522				139	0	0	165	53	24.3119
ZDHHC4	0	genome.wustl.edu	37	7	6628377	6628377	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	6628377	6628377	T	C	SNP	ZDHHC4	ENST00000335965	human	ensembl	74_37	+1	known	missense	c.871	p.Y291H	0.288	superfamily_Cyt_c_Oxase_su1_dom	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC4	HGNC	ENSG00000136247				149	0	0	177	66	27.1605
WBSCR17	0	genome.wustl.edu	37	7	71130562	71130562	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	71130562	71130562	C	T	SNP	WBSCR17	ENST00000333538	human	ensembl	74_37	+1	known	missense	c.1247	p.A416V	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	WBSCR17	HGNC	ENSG00000185274				37	0	0	47	14	22.9508
MLXIPL	0	genome.wustl.edu	37	7	73010969	73010969	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	73010969	73010969	C	T	SNP	MLXIPL	ENST00000313375	human	ensembl	74_37	-1	known	missense	c.1822	p.G608S	0.999	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MLXIPL	HGNC	ENSG00000009950				14	0	0	13	4	23.5294
PCLO	0	genome.wustl.edu	37	7	82582682	82582682	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	82582682	82582682	T	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.7587	p.I2529M	0.052	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				86	0	0	116	16	12.1212
PCLO	0	genome.wustl.edu	37	7	82583741	82583741	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	82583741	82583741	G	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.6528	p.V2176	0.401	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				73	0	0	97	27	21.7742
SEMA3E	0	genome.wustl.edu	37	7	83029537	83029537	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	83029537	83029537	G	A	SNP	SEMA3E	ENST00000307792	human	ensembl	74_37	-1	known	silent	c.1173	p.Y391	0.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3E	HGNC	ENSG00000170381				66	0	0	156	55	26.0664
COL1A2	0	genome.wustl.edu	37	7	94039080	94039080	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	94039080	94039080	G	A	SNP	COL1A2	ENST00000297268	human	ensembl	74_37	+1	known	missense	c.982	p.G328S	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fib_collagen_C	-	no_errors	COL1A2	HGNC	ENSG00000164692				107	1	0.925926	133	38	22.2222
VPS13B	0	genome.wustl.edu	37	8	100866034	100866034	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	100866034	100866034	A	G	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	missense	c.10492	p.K3498E	0.998	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				201	0	0	200	56	21.875
RP1L1	0	genome.wustl.edu	37	8	10468839	10468839	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	10468839	10468839	G	A	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	silent	c.2769	p.S923	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638				53	0	0	48	22	31.4286
RP1L1	0	genome.wustl.edu	37	8	10470600	10470600	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	10470600	10470600	C	T	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	silent	c.1008	p.T336	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638				155	0	0	149	57	27.6699
LRP12	0	genome.wustl.edu	37	8	105509306	105509306	+	Nonsense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	105509306	105509306	T	A	SNP	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	nonsense	c.1417	p.R473*	0.985	superfamily_LDrepeatLR_classA_rpt	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650				66	0	0	104	28	21.2121
CSMD3	0	genome.wustl.edu	37	8	113668504	113668504	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	113668504	113668504	C	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.2883	p.L961	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				42	0	0	73	13	15.1163
NEIL2	0	genome.wustl.edu	37	8	11637219	11637219	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	11637219	11637219	C	T	SNP	NEIL2	ENST00000284503	human	ensembl	74_37	+1	known	missense	c.251	p.A84V	0.000	pfam_DNA_glycosylase/AP_lyase_cat,pfscan_DNA_glycosylase/AP_lyase_cat	pfam_DNA_glyclase/AP_lyase_DNA-bd,pfam_DNA_glycosylase/AP_lyase_cat,superfamily_Ribosomal_S13-like_H2TH,pfscan_Znf_DNA_glyclase/AP_lyase,pfscan_DNA_glycosylase/AP_lyase_cat	-	no_errors	NEIL2	HGNC	ENSG00000154328				197	0	0	182	65	26.3158
NEIL2	0	genome.wustl.edu	37	8	11643696	11643696	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	11643696	11643696	G	A	SNP	NEIL2	ENST00000284503	human	ensembl	74_37	+1	known	missense	c.913	p.E305K	0.061	pfscan_Znf_DNA_glyclase/AP_lyase	pfam_DNA_glyclase/AP_lyase_DNA-bd,pfam_DNA_glycosylase/AP_lyase_cat,superfamily_Ribosomal_S13-like_H2TH,pfscan_Znf_DNA_glyclase/AP_lyase,pfscan_DNA_glycosylase/AP_lyase_cat	-	no_errors	NEIL2	HGNC	ENSG00000154328				47	0	0	61	19	23.75
LONRF1	0	genome.wustl.edu	37	8	12586437	12586437	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	12586437	12586437	G	A	SNP	LONRF1	ENST00000398246	human	ensembl	74_37	-1	known	silent	c.1983	p.A661	0.967	pfam_Pept_S16_N,superfamily_PUA-like_domain,smart_Pept_S16_N	pfam_Pept_S16_N,pfam_Znf_C3HC4_RING-type,superfamily_PUA-like_domain,smart_TPR_repeat,smart_Znf_RING,smart_Pept_S16_N,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	LONRF1	HGNC	ENSG00000154359				76	0	0	147	41	21.8085
SLC45A4	0	genome.wustl.edu	37	8	142228905	142228905	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	142228905	142228905	G	A	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	silent	c.834	p.H278	0.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				165	0	0	179	47	20.7965
BAI1	0	genome.wustl.edu	37	8	143570403	143570403	+	Silent	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	143570403	143570403	T	C	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	silent	c.2460	p.D820	0.359	pfam_DUF3497	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790				24	0	0	26	6	18.75
MAPK15	0	genome.wustl.edu	37	8	144804001	144804001	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	144804001	144804001	G	A	SNP	MAPK15	ENST00000338033	human	ensembl	74_37	+1	known	missense	c.1409	p.R470Q	0.782	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPK15	HGNC	ENSG00000181085				68	0	0	56	29	34.1176
EPPK1	0	genome.wustl.edu	37	8	144945705	144945705	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	144945705	144945705	G	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.1717	p.L573M	0.155	smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				19	0	0	14	4	22.2222
PLEC	0	genome.wustl.edu	37	8	144999478	144999478	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	144999478	144999478	T	G	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.5030	p.E1677A	0.998	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				17	0	0	16	5	23.8095
MYOM2	0	genome.wustl.edu	37	8	2041865	2041865	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	2041865	2041865	G	A	SNP	MYOM2	ENST00000262113	human	ensembl	74_37	+1	known	missense	c.2072	p.G691E	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM2	HGNC	ENSG00000036448				121	0	0	98	43	30.4965
GFRA2	0	genome.wustl.edu	37	8	21608381	21608381	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	21608381	21608381	A	G	SNP	GFRA2	ENST00000517328	human	ensembl	74_37	-1	known	silent	c.513	p.N171	0.666	pfam_GDNF/GAS1,smart_GDNF/GAS1,pirsf_Glial_neurotroph_fac_rcpt_a1/2	pfam_GDNF/GAS1,smart_GDNF/GAS1,pirsf_Glial_neurotroph_fac_rcpt_a1/2,prints_GDNF_rcpt,prints_GDNF_rcpt_a2	-	no_errors	GFRA2	HGNC	ENSG00000168546				82	0	0	73	22	23.1579
XPO7	0	genome.wustl.edu	37	8	21853019	21853019	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	21853019	21853019	C	T	SNP	XPO7	ENST00000434536	human	ensembl	74_37	+1	known	missense	c.2281	p.P761S	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO7	HGNC	ENSG00000130227				13	0	0	18	7	28
STMN4	0	genome.wustl.edu	37	8	27097669	27097669	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	27097669	27097669	G	A	SNP	STMN4	ENST00000350889	human	ensembl	74_37	-1	known	missense	c.410	p.A137V	0.999	pfam_Stathmin_fam,superfamily_Stathmin_fam,pirsf_Stathmin_fam,prints_Stathmin_fam	pfam_Stathmin_fam,superfamily_Stathmin_fam,pirsf_Stathmin_fam,prints_Stathmin_fam	-	no_errors	STMN4	HGNC	ENSG00000015592				123	0	0	123	51	29.3103
SCARA3	0	genome.wustl.edu	37	8	27516059	27516059	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	27516059	27516059	G	T	SNP	SCARA3	ENST00000301904	human	ensembl	74_37	+1	known	missense	c.372	p.Q124H	1.000	NULL	pfam_Collagen	-	no_errors	SCARA3	HGNC	ENSG00000168077				306	2	0.649351	259	70	21.2766
KCNU1	0	genome.wustl.edu	37	8	36721991	36721991	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	36721991	36721991	C	T	SNP	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	missense	c.1961	p.P654L	0.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262				41	0	0	118	25	17.4825
RAB11FIP1	0	genome.wustl.edu	37	8	37729675	37729675	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	37729675	37729675	G	A	SNP	RAB11FIP1	ENST00000330843	human	ensembl	74_37	-1	known	missense	c.2645	p.A882V	0.000	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP1	HGNC	ENSG00000156675				77	0	0	61	26	29.8851
FBXO25	0	genome.wustl.edu	37	8	418731	418731	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	418731	418731	G	A	SNP	FBXO25	ENST00000276326	human	ensembl	74_37	+1	known	missense	c.1031	p.C344Y	1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO25	HGNC	ENSG00000147364				39	0	0	46	16	25.8065
PLAT	0	genome.wustl.edu	37	8	42033662	42033662	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	42033662	42033662	G	A	SNP	PLAT	ENST00000220809	human	ensembl	74_37	-1	known	missense	c.1538	p.S513L	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,pfam_Kringle,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PLAT	HGNC	ENSG00000104368				15	0	0	22	15	40.5405
VDAC3	0	genome.wustl.edu	37	8	42252652	42252652	+	Splice_Site	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	42252652	42252652	G	A	SNP	VDAC3	ENST00000521158	human	ensembl	74_37	+1	known	splice_site	c.117+1	e2+1	1.000	-	-	-	no_errors	VDAC3	HGNC	ENSG00000078668				108	0	0	112	8	6.66667
ST18	0	genome.wustl.edu	37	8	53092689	53092689	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	53092689	53092689	A	G	SNP	ST18	ENST00000276480	human	ensembl	74_37	-1	known	silent	c.270	p.S90	0.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488				197	0	0	280	80	22.2222
NPBWR1	0	genome.wustl.edu	37	8	53852517	53852517	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	53852517	53852517	C	T	SNP	NPBWR1	ENST00000331251	human	ensembl	74_37	+1	known	missense	c.50	p.P17L	0.003	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Opioid_rcpt	-	no_errors	NPBWR1	HGNC	ENSG00000183729				21	0	0	14	7	33.3333
CHD7	0	genome.wustl.edu	37	8	61754314	61754314	+	Splice_Site	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	61754314	61754314	G	A	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	splice_site	c.4644+1	e19+1	1.000	-	-	-	no_errors	CHD7	HGNC	ENSG00000171316				45	0	0	49	18	26.8657
CHD7	0	genome.wustl.edu	37	8	61764678	61764678	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	61764678	61764678	C	T	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	silent	c.5766	p.R1922	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316				54	0	0	71	21	22.8261
TRIM55	0	genome.wustl.edu	37	8	67064641	67064641	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	67064641	67064641	G	A	SNP	TRIM55	ENST00000315962	human	ensembl	74_37	+1	known	missense	c.1015	p.G339R	0.082	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM55	HGNC	ENSG00000147573				10	0	0	18	8	30.7692
NCOA2	0	genome.wustl.edu	37	8	71041179	71041179	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	71041179	71041179	C	T	SNP	NCOA2	ENST00000452400	human	ensembl	74_37	-1	known	missense	c.3361	p.D1121N	1.000	pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA2	HGNC	ENSG00000140396				15	0	0	16	8	33.3333
KCNB2	0	genome.wustl.edu	37	8	73849334	73849334	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	73849334	73849334	C	T	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	missense	c.1744	p.P582S	0.890	pfam_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv2.2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				104	0	0	91	30	24.7934
PEX2	0	genome.wustl.edu	37	8	77896329	77896329	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	77896329	77896329	A	G	SNP	PEX2	ENST00000357039	human	ensembl	74_37	-1	known	missense	c.86	p.L29P	1.000	pfam_Pex_N	pfam_Pex_N,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PEX2	HGNC	ENSG00000164751				91	0	0	129	39	23.2143
IMPA1	0	genome.wustl.edu	37	8	82572840	82572840	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	82572840	82572840	G	A	SNP	IMPA1	ENST00000449740	human	ensembl	74_37	-1	known	missense	c.806	p.A269V	1.000	pfam_Inositol_monophosphatase	pfam_Inositol_monophosphatase,prints_Inositol_monoPase_Li-sen,prints_Inositol_monophosphatase	-	no_errors	IMPA1	HGNC	ENSG00000133731				64	0	0	89	37	29.3651
RIPK2	0	genome.wustl.edu	37	8	90770396	90770396	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	90770396	90770396	C	T	SNP	RIPK2	ENST00000220751	human	ensembl	74_37	+1	known	silent	c.108	p.R36	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Rcpt-int_Ser/Thr_kinase-2,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CARD,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Rcpt-int_Ser/Thr_kinase-2,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_CARD,pfscan_Prot_kinase_dom	-	no_errors	RIPK2	HGNC	ENSG00000104312				15	0	0	14	5	26.3158
KIAA1429	0	genome.wustl.edu	37	8	95539535	95539535	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	95539535	95539535	G	A	SNP	KIAA1429	ENST00000297591	human	ensembl	74_37	-1	known	missense	c.937	p.R313C	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944				53	0	0	65	24	26.9663
DPY19L4	0	genome.wustl.edu	37	8	95796029	95796029	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	95796029	95796029	A	G	SNP	DPY19L4	ENST00000414645	human	ensembl	74_37	+1	known	missense	c.1847	p.N616S	1.000	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L4	HGNC	ENSG00000156162				40	0	0	52	13	20
SDC2	0	genome.wustl.edu	37	8	97620628	97620628	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	97620628	97620628	C	T	SNP	SDC2	ENST00000302190	human	ensembl	74_37	+1	known	silent	c.372	p.A124	0.570	pfam_Syndecan/Neurexin_dom	pfam_Syndecan/Neurexin_dom,smart_Neurexin-like	-	no_errors	SDC2	HGNC	ENSG00000169439				58	0	0	77	25	24.5098
MTDH	0	genome.wustl.edu	37	8	98699707	98699707	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	98699707	98699707	C	T	SNP	MTDH	ENST00000336273	human	ensembl	74_37	+1	known	missense	c.619	p.R207C	1.000	NULL	NULL	-	no_errors	MTDH	HGNC	ENSG00000147649				150	0	0	174	52	23.0088
ERP44	0	genome.wustl.edu	37	9	102778630	102778630	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	102778630	102778630	G	A	SNP	ERP44	ENST00000262455	human	ensembl	74_37	-1	known	nonsense	c.736	p.R246*	1.000	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,pfam_Calsequestrin,superfamily_Thioredoxin-like_fold	-	no_errors	ERP44	HGNC	ENSG00000023318				122	0	0	177	15	7.8125
ERP44	0	genome.wustl.edu	37	9	102782969	102782969	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	102782969	102782969	C	T	SNP	ERP44	ENST00000262455	human	ensembl	74_37	-1	known	silent	c.516	p.S172	0.984	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,pfam_Calsequestrin,superfamily_Thioredoxin-like_fold	-	no_errors	ERP44	HGNC	ENSG00000023318				29	0	0	64	16	20
OR13C4	0	genome.wustl.edu	37	9	107289389	107289389	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	107289389	107289389	C	T	SNP	OR13C4	ENST00000277216	human	ensembl	74_37	-1	known	missense	c.102	p.M34I	1.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR13C4	HGNC	ENSG00000148136				97	0	0	150	45	23.0769
ZNF462	0	genome.wustl.edu	37	9	109694807	109694807	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	109694807	109694807	G	A	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	silent	c.6273	p.S2091	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				77	0	0	76	18	19.1489
KLF4	0	genome.wustl.edu	37	9	110248069	110248069	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	110248069	110248069	G	A	SNP	KLF4	ENST00000374672	human	ensembl	74_37	-1	known	missense	c.1403	p.S468L	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF4	HGNC	ENSG00000136826				291	0	0	282	106	27.3196
ZNF883	0	genome.wustl.edu	37	9	115760546	115760546	+	RNA	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	115760546	115760546	T	C	SNP	ZNF883	ENST00000427548	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ZNF883	HGNC	ENSG00000228623				105	0	0	106	27	20.3008
ALAD	0	genome.wustl.edu	37	9	116152094	116152094	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	116152094	116152094	G	A	SNP	ALAD	ENST00000409155	human	ensembl	74_37	-1	known	silent	c.585	p.S195	1.000	pfam_Porphobilinogen_synth,pirsf_Porphobilinogen_synth,prints_Porphobilinogen_synth	pfam_Porphobilinogen_synth,pirsf_Porphobilinogen_synth,prints_Porphobilinogen_synth	-	no_errors	ALAD	HGNC	ENSG00000148218				75	0	0	65	22	25.2874
GSN	0	genome.wustl.edu	37	9	124074693	124074693	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	124074693	124074693	G	A	SNP	GSN	ENST00000373818	human	ensembl	74_37	+1	known	missense	c.743	p.R248Q	1.000	pfam_Gelsolin_dom,smart_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	GSN	HGNC	ENSG00000148180				124	0	0	156	39	20
MORN5	0	genome.wustl.edu	37	9	124962220	124962220	+	RNA	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	124962220	124962220	G	A	SNP	MORN5	ENST00000486801	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MORN5	HGNC	ENSG00000185681				64	0	0	81	27	25
OR1Q1	0	genome.wustl.edu	37	9	125377740	125377740	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	125377740	125377740	G	A	SNP	OR1Q1	ENST00000297913	human	ensembl	74_37	+1	known	missense	c.724	p.G242S	0.961	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1Q1	HGNC	ENSG00000165202				77	0	0	117	53	31.1765
GPR21	0	genome.wustl.edu	37	9	125797169	125797169	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	125797169	125797169	A	G	SNP	GPR21	ENST00000373642	human	ensembl	74_37	+1	known	silent	c.324	p.V108	0.909	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR21	HGNC	ENSG00000188394				50	0	0	84	32	27.5862
TYRP1	0	genome.wustl.edu	37	9	12694160	12694160	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	12694160	12694160	G	A	SNP	TYRP1	ENST00000388918	human	ensembl	74_37	+1	known	missense	c.164	p.R55H	0.120	NULL	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYRP1	HGNC	ENSG00000107165				30	0	0	52	22	29.7297
NR5A1	0	genome.wustl.edu	37	9	127262518	127262518	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	127262518	127262518	G	A	SNP	NR5A1	ENST00000373588	human	ensembl	74_37	-1	known	missense	c.721	p.R241W	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,pirsf_Steroidogenic_factor_1	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pirsf_Steroidogenic_factor_1,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR5A1	HGNC	ENSG00000136931				17	0	0	17	7	29.1667
FAM129B	0	genome.wustl.edu	37	9	130272446	130272446	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	130272446	130272446	G	A	SNP	FAM129B	ENST00000373312	human	ensembl	74_37	-1	known	silent	c.1140	p.G380	0.008	NULL	pfscan_Pleckstrin_homology	-	no_errors	FAM129B	HGNC	ENSG00000136830				146	0	0	137	42	23.4637
SH2D3C	0	genome.wustl.edu	37	9	130507379	130507379	+	Splice_Site	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	130507379	130507379	C	T	SNP	SH2D3C	ENST00000314830	human	ensembl	74_37	-1	known	splice_site	c.1265-1	e7-1	0.996	-	-	-	no_errors	SH2D3C	HGNC	ENSG00000095370				41	0	0	57	22	27.8481
CERCAM	0	genome.wustl.edu	37	9	131191074	131191074	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	131191074	131191074	C	T	SNP	CERCAM	ENST00000372838	human	ensembl	74_37	+1	known	missense	c.925	p.R309W	0.525	NULL	pfam_Glyco_trans_25	-	no_errors	CERCAM	HGNC	ENSG00000167123				101	0	0	101	17	14.4068
SET	0	genome.wustl.edu	37	9	131455924	131455924	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	131455924	131455924	C	T	SNP	SET	ENST00000372692	human	ensembl	74_37	+1	known	missense	c.539	p.T180M	1.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	SET	HGNC	ENSG00000119335				43	0	0	38	13	25.4902
EXOSC2	0	genome.wustl.edu	37	9	133574891	133574891	+	RNA	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	133574891	133574891	C	T	SNP	EXOSC2	ENST00000463488	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EXOSC2	HGNC	ENSG00000130713				76	0	0	80	25	23.8095
LAMC3	0	genome.wustl.edu	37	9	133914292	133914292	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	133914292	133914292	C	T	SNP	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	missense	c.1018	p.R340W	0.990	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555				116	0	0	99	37	27.2059
LAMC3	0	genome.wustl.edu	37	9	133942368	133942368	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	133942368	133942368	A	G	SNP	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	missense	c.2369	p.D790G	1.000	pfam_EGF_laminin,smart_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555				96	0	0	98	30	23.4375
CELP	0	genome.wustl.edu	37	9	135962338	135962338	+	RNA	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	135962338	135962338	C	A	SNP	CELP	ENST00000411440	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.972	-	-	-	no_errors	CELP	HGNC	ENSG00000170827				21	0	0	27	4	12.9032
BRD3	0	genome.wustl.edu	37	9	136901415	136901415	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	136901415	136901415	C	T	SNP	BRD3	ENST00000303407	human	ensembl	74_37	-1	known	missense	c.1675	p.A559T	0.984	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	BRD3	HGNC	ENSG00000169925				75	0	0	75	22	22.6804
OLFM1	0	genome.wustl.edu	37	9	138011370	138011370	+	Nonsense_Mutation	SNP	T	T	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	138011370	138011370	T	A	SNP	OLFM1	ENST00000371793	human	ensembl	74_37	+1	known	nonsense	c.804	p.Y268*	1.000	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,pfam_Noelin-1,superfamily_Quinonprotein_ADH-like_supfam,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFM1	HGNC	ENSG00000130558				121	0	0	115	43	27.2152
QSOX2	0	genome.wustl.edu	37	9	139113734	139113734	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	139113734	139113734	G	A	SNP	QSOX2	ENST00000358701	human	ensembl	74_37	-1	known	silent	c.729	p.D243	0.000	NULL	pfam_ERV/ALR_sulphydryl_oxidase,pfam_Thioredoxin_domain,superfamily_ERV/ALR_sulphydryl_oxidase,superfamily_Thioredoxin-like_fold	-	no_errors	QSOX2	HGNC	ENSG00000165661				140	1	0.70922	117	37	24.026
SNAPC4	0	genome.wustl.edu	37	9	139279234	139279234	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	139279234	139279234	T	C	SNP	SNAPC4	ENST00000298532	human	ensembl	74_37	-1	known	missense	c.1358	p.K453R	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC	ENSG00000165684				89	0	0	86	22	20.3704
KIAA1984	0	genome.wustl.edu	37	9	139699855	139699855	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	139699855	139699855	C	T	SNP	KIAA1984	ENST00000479371	human	ensembl	74_37	+1	known	missense	c.892	p.R298C	0.000	NULL	NULL	-	no_errors	KIAA1984	HGNC	ENSG00000213213				39	0	0	45	13	22.4138
C9orf172	0	genome.wustl.edu	37	9	139741105	139741105	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	139741105	139741105	C	T	SNP	C9orf172	ENST00000436881	human	ensembl	74_37	+1	known	missense	c.2239	p.R747C	1.000	NULL	NULL	-	no_errors	C9orf172	HGNC	ENSG00000232434				21	0	0	23	9	28.125
EDF1	0	genome.wustl.edu	37	9	139757759	139757759	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	139757759	139757759	G	A	SNP	EDF1	ENST00000224073	human	ensembl	74_37	-1	known	missense	c.272	p.T91M	0.992	pfam_Cro/C1-type_HTH,superfamily_Lambda_DNA-bd_dom,smart_Cro/C1-type_HTH,pfscan_Cro/C1-type_HTH	pfam_MBF1_N,pfam_Cro/C1-type_HTH,superfamily_Lambda_DNA-bd_dom,smart_Cro/C1-type_HTH,pfscan_Cro/C1-type_HTH	-	no_errors	EDF1	HGNC	ENSG00000107223				101	1	0.980392	109	34	23.7762
C9orf142	0	genome.wustl.edu	37	9	139888076	139888076	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	139888076	139888076	C	T	SNP	C9orf142	ENST00000371620	human	ensembl	74_37	+1	known	missense	c.535	p.R179W	0.983	NULL	NULL	-	no_errors	C9orf142	HGNC	ENSG00000148362				79	0	0	94	21	18.2609
CACNA1B	0	genome.wustl.edu	37	9	140809195	140809195	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	140809195	140809195	G	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.712	p.A238T	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				48	0	0	45	15	25
CBWD1	0	genome.wustl.edu	37	9	164038	164038	+	Splice_Site	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	164038	164038	C	G	SNP	CBWD1	ENST00000356521	human	ensembl	74_37	-1	known	splice_site	c.431-1	e5-1	1.000	-	-	-	no_errors	CBWD1	HGNC	ENSG00000172785				153	0	0	185	10	5.12821
IFNA8	0	genome.wustl.edu	37	9	21409548	21409548	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	21409548	21409548	C	T	SNP	IFNA8	ENST00000380205	human	ensembl	74_37	+1	known	nonsense	c.373	p.Q125*	0.000	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA8	HGNC	ENSG00000120242				121	0	0	230	81	26.045
KCNV2	0	genome.wustl.edu	37	9	2718008	2718008	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	2718008	2718008	G	A	SNP	KCNV2	ENST00000382082	human	ensembl	74_37	+1	known	missense	c.269	p.S90N	0.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNV2	HGNC	ENSG00000168263				42	0	0	43	10	18.8679
TOPORS	0	genome.wustl.edu	37	9	32542476	32542476	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	32542476	32542476	G	A	SNP	TOPORS	ENST00000360538	human	ensembl	74_37	-1	known	missense	c.2047	p.R683W	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TOPORS	HGNC	ENSG00000197579				333	0	0	315	117	27.0833
DNAJA1	0	genome.wustl.edu	37	9	33038834	33038834	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	33038834	33038834	A	G	SNP	DNAJA1	ENST00000330899	human	ensembl	74_37	+1	known	missense	c.1127	p.Y376C	1.000	NULL	pfam_DnaJ_C,pfam_DnaJ_domain,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA1	HGNC	ENSG00000086061				54	0	0	96	8	7.69231
NOL6	0	genome.wustl.edu	37	9	33467247	33467247	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	33467247	33467247	C	T	SNP	NOL6	ENST00000297990	human	ensembl	74_37	-1	known	missense	c.1739	p.R580H	1.000	pfam_Nrap	pfam_Nrap	-	no_errors	NOL6	HGNC	ENSG00000165271				47	0	0	47	14	22.9508
DCTN3	0	genome.wustl.edu	37	9	34617918	34617918	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	34617918	34617918	T	C	SNP	DCTN3	ENST00000259632	human	ensembl	74_37	-1	known	missense	c.232	p.I78V	0.957	pfam_Dynactin_p22	pfam_Dynactin_p22	-	no_errors	DCTN3	HGNC	ENSG00000137100				54	0	0	60	23	27.7108
STOML2	0	genome.wustl.edu	37	9	35101920	35101920	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	35101920	35101920	C	T	SNP	STOML2	ENST00000356493	human	ensembl	74_37	-1	known	missense	c.323	p.R108H	1.000	pfam_Band_7,smart_Band_7,prints_Stomatin	pfam_Band_7,smart_Band_7,prints_Stomatin	-	no_errors	STOML2	HGNC	ENSG00000165283				148	1	0.671141	130	39	23.0769
RUSC2	0	genome.wustl.edu	37	9	35559222	35559222	+	Splice_Site	SNP	G	G	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	35559222	35559222	G	T	SNP	RUSC2	ENST00000361226	human	ensembl	74_37	+1	known	splice_site	c.3342-1	e8-1	1.000	-	-	-	no_errors	RUSC2	HGNC	ENSG00000198853				109	0	0	97	40	29.1971
NPR2	0	genome.wustl.edu	37	9	35794060	35794060	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	35794060	35794060	G	A	SNP	NPR2	ENST00000342694	human	ensembl	74_37	+1	known	missense	c.833	p.R278H	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ntpep_rcpt,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	NPR2	HGNC	ENSG00000159899				107	0	0	86	29	25.2174
FBXO10	0	genome.wustl.edu	37	9	37541398	37541398	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	37541398	37541398	C	T	SNP	FBXO10	ENST00000432825	human	ensembl	74_37	-1	known	missense	c.368	p.S123N	1.000	superfamily_Pectin_lyase_fold/virulence	pfam_F-box_dom,superfamily_Pectin_lyase_fold/virulence,superfamily_F-box_dom,smart_F-box_dom,smart_PbH1,smart_Carb-bd_sugar_hydrolysis-dom,pfscan_F-box_dom,tigrfam_Para_beta_helix_rpt-2	-	no_errors	FBXO10	HGNC	ENSG00000147912				148	0	0	155	44	22.1106
UHRF2	0	genome.wustl.edu	37	9	6482085	6482085	+	Nonsense_Mutation	SNP	A	A	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	6482085	6482085	A	T	SNP	UHRF2	ENST00000276893	human	ensembl	74_37	+1	known	nonsense	c.1378	p.R460*	1.000	pfam_SRA_YDG,smart_SRA_YDG,pfscan_SRA_YDG	pfam_SRA_YDG,pfam_DUF3590,pfam_Ubiquitin_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Ubiquitin_dom,smart_Znf_PHD,smart_Znf_RING,smart_SRA_YDG,pfscan_SRA_YDG,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Ubiquitin_supergroup	-	no_errors	UHRF2	HGNC	ENSG00000147854				161	0	0	203	75	26.9784
PGM5	0	genome.wustl.edu	37	9	70993121	70993121	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	70993121	70993121	C	T	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	nonsense	c.268	p.R90*	0.949	pfam_A-D-PHexomutase_a/b/a-I,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330				39	0	0	135	10	6.89655
TRPM3	0	genome.wustl.edu	37	9	73152135	73152135	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	73152135	73152135	C	T	SNP	TRPM3	ENST00000423814	human	ensembl	74_37	-1	known	silent	c.3939	p.S1313	0.986	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067				133	0	0	129	52	28.7293
TMC1	0	genome.wustl.edu	37	9	75369791	75369791	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	75369791	75369791	C	T	SNP	TMC1	ENST00000297784	human	ensembl	74_37	+1	known	silent	c.732	p.Y244	0.716	NULL	pfam_TMC	-	no_errors	TMC1	HGNC	ENSG00000165091				44	0	0	51	19	27.1429
VPS13A	0	genome.wustl.edu	37	9	79792679	79792679	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	79792679	79792679	T	C	SNP	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	missense	c.59	p.V20A	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				47	0	0	54	11	16.9231
SPATA31D5P	0	genome.wustl.edu	37	9	84531943	84531943	+	RNA	SNP	C	C	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	84531943	84531943	C	G	SNP	SPATA31D5P	ENST00000527857	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	SPATA31D5P	HGNC	ENSG00000240632				15	0	0	50	14	21.875
CTSL	0	genome.wustl.edu	37	9	90343560	90343560	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	90343560	90343560	C	T	SNP	CTSL	ENST00000340342	human	ensembl	74_37	+1	known	missense	c.457	p.R153W	0.998	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSL	HGNC	ENSG00000135047				213	0	0	191	56	22.6721
SECISBP2	0	genome.wustl.edu	37	9	91964707	91964707	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	91964707	91964707	C	T	SNP	SECISBP2	ENST00000375807	human	ensembl	74_37	+1	known	silent	c.1755	p.D585	0.083	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2	HGNC	ENSG00000187742				149	0	0	146	34	18.8889
IARS	0	genome.wustl.edu	37	9	95012488	95012488	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	95012488	95012488	C	T	SNP	IARS	ENST00000375643	human	ensembl	74_37	-1	known	missense	c.2513	p.R838Q	1.000	pfam_V/L/I-tRNA-synth_anticodon-bd,superfamily_tRNAsynth_1a_anticodon-bd,tigrfam_Ile-tRNA-ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Ile-tRNA-ligase,tigrfam_Ile-tRNA-ligase	-	no_errors	IARS	HGNC	ENSG00000196305				136	0	0	126	26	17.1053
NOL8	0	genome.wustl.edu	37	9	95073456	95073456	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	95073456	95073456	T	C	SNP	NOL8	ENST00000442668	human	ensembl	74_37	-1	known	missense	c.2444	p.Q815R	0.008	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NOL8	HGNC	ENSG00000198000				35	0	0	57	13	18.5714
FGD3	0	genome.wustl.edu	37	9	95796871	95796871	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	95796871	95796871	C	T	SNP	FGD3	ENST00000337352	human	ensembl	74_37	+1	known	missense	c.1834	p.R612W	0.042	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD3	HGNC	ENSG00000127084				132	0	0	103	34	24.8175
FAM120A	0	genome.wustl.edu	37	9	96214614	96214614	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	96214614	96214614	G	A	SNP	FAM120A	ENST00000333936	human	ensembl	74_37	+1	known	silent	c.417	p.L139	1.000	NULL	NULL	-	no_errors	FAM120A	HGNC	ENSG00000048828				30	0	0	30	9	23.0769
ZNF367	0	genome.wustl.edu	37	9	99150564	99150564	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	99150564	99150564	C	T	SNP	ZNF367	ENST00000375256	human	ensembl	74_37	-1	known	silent	c.1008	p.A336	0.588	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF367	HGNC	ENSG00000165244				58	0	0	87	17	16.3462
KIR2DL2	0	genome.wustl.edu	37	GL000209.1	58473	58473	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	GL000209.1	58473	58473	C	T	SNP	KIR2DL2	ENST00000400851	human	ensembl	74_37	+1	known	missense	c.154	p.R52C	NULL	pfam_Immunoglobulin,smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL2	HGNC	ENSG00000215764				109	0	0	123	28	18.543
GPRASP2	0	genome.wustl.edu	37	X	101971337	101971337	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	101971337	101971337	T	G	SNP	GPRASP2	ENST00000332262	human	ensembl	74_37	+1	known	missense	c.1540	p.F514V	0.067	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP2	HGNC	ENSG00000158301				80	0	0	62	69	52.6718
COL4A6	0	genome.wustl.edu	37	X	107402789	107402789	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	107402789	107402789	G	A	SNP	COL4A6	ENST00000372216	human	ensembl	74_37	-1	known	missense	c.4718	p.A1573V	0.998	pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A6	HGNC	ENSG00000197565				59	0	0	37	38	50.6667
IRS4	0	genome.wustl.edu	37	X	107979542	107979542	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	107979542	107979542	C	T	SNP	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	silent	c.33	p.A11	0.676	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124				25	0	0	23	32	58.1818
CAPN6	0	genome.wustl.edu	37	X	110495724	110495724	+	Silent	SNP	C	C	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	110495724	110495724	C	A	SNP	CAPN6	ENST00000324068	human	ensembl	74_37	-1	known	silent	c.510	p.L170	0.074	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN6	HGNC	ENSG00000077274				30	0	0	26	33	55.9322
DCAF12L1	0	genome.wustl.edu	37	X	125686397	125686397	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	125686397	125686397	G	A	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	silent	c.195	p.P65	0.006	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				55	0	0	43	43	50
ACTRT1	0	genome.wustl.edu	37	X	127185702	127185702	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	127185702	127185702	C	T	SNP	ACTRT1	ENST00000371124	human	ensembl	74_37	-1	known	missense	c.484	p.V162I	0.983	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT1	HGNC	ENSG00000123165				108	0	0	96	88	47.8261
GPC3	0	genome.wustl.edu	37	X	132887949	132887949	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	132887949	132887949	G	A	SNP	GPC3	ENST00000394299	human	ensembl	74_37	-1	known	missense	c.592	p.L198F	1.000	pfam_Glypican	pfam_Glypican	-	no_errors	GPC3	HGNC	ENSG00000147257				107	0	0	212	24	10.1695
GABRE	0	genome.wustl.edu	37	X	151129822	151129822	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	151129822	151129822	G	A	SNP	GABRE	ENST00000370328	human	ensembl	74_37	-1	known	silent	c.579	p.A193	0.988	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAe_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRE	HGNC	ENSG00000102287				46	0	0	39	40	50.6329
MAGEA1	0	genome.wustl.edu	37	X	152482987	152482987	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	152482987	152482987	C	T	SNP	MAGEA1	ENST00000356661	human	ensembl	74_37	-1	known	silent	c.24	p.L8	0.000	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA1	HGNC	ENSG00000198681				71	0	0	80	8	9.09091
DUSP9	0	genome.wustl.edu	37	X	152915111	152915111	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	152915111	152915111	G	A	SNP	DUSP9	ENST00000342782	human	ensembl	74_37	+1	known	silent	c.798	p.S266	0.999	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP9	HGNC	ENSG00000130829				121	0	0	79	51	39.2308
FLNA	0	genome.wustl.edu	37	X	153596065	153596065	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	153596065	153596065	C	T	SNP	FLNA	ENST00000369850	human	ensembl	74_37	-1	known	missense	c.664	p.V222I	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924				101	0	0	81	65	44.5205
PLXNA3	0	genome.wustl.edu	37	X	153693146	153693146	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	153693146	153693146	C	T	SNP	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	missense	c.1978	p.R660C	1.000	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827				15	0	0	10	9	47.3684
ZBED1	0	genome.wustl.edu	37	X	2407993	2407993	+	Silent	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	2407993	2407993	G	A	SNP	ZBED1	ENST00000381218	human	ensembl	74_37	-1	known	silent	c.768	p.I256	0.970	superfamily_RNaseH-like_dom	pfam_HATC_dom_C,pfam_Znf_BED_prd,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED1	HGNC	ENSG00000214717				142	0	0	94	52	35.6164
ARX	0	genome.wustl.edu	37	X	25033731	25033731	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	25033731	25033731	G	A	SNP	ARX	ENST00000379044	human	ensembl	74_37	-1	known	missense	c.124	p.R42W	1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom,prints_Antifreeze_1	-	no_errors	ARX	HGNC	ENSG00000004848				14	0	0	11	9	45
HDAC6	0	genome.wustl.edu	37	X	48661558	48661558	+	Silent	SNP	A	A	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	48661558	48661558	A	G	SNP	HDAC6	ENST00000444343	human	ensembl	74_37	+1	known	silent	c.288	p.A96	0.000	NULL	pfam_His_deacetylse_dom,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,prints_His_deacetylse	-	no_errors	HDAC6	HGNC	ENSG00000094631				20	0	0	23	18	43.9024
PPP1R3F	0	genome.wustl.edu	37	X	49138500	49138500	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	49138500	49138500	C	T	SNP	PPP1R3F	ENST00000055335	human	ensembl	74_37	+1	known	missense	c.1117	p.R373C	1.000	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3F	HGNC	ENSG00000049769				40	0	0	26	9	25.7143
ALAS2	0	genome.wustl.edu	37	X	55039970	55039970	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	55039970	55039970	G	A	SNP	ALAS2	ENST00000330807	human	ensembl	74_37	-1	known	missense	c.1549	p.R517C	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,tigrfam_4pyrrol_synth_NH2levulA_synth	pfam_Aminotransferase_I/II,pfam_5aminolev_synth_preseq,pfam_Aminotrans_V/Cys_dSase,pfam_Cys/Met-Metab_PyrdxlP-dep_enz,superfamily_PyrdxlP-dep_Trfase,tigrfam_4pyrrol_synth_NH2levulA_synth	-	no_errors	ALAS2	HGNC	ENSG00000158578				49	0	0	26	26	50
SHOX	0	genome.wustl.edu	37	X	591692	591692	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	591692	591692	C	T	SNP	SHOX	ENST00000381578	human	ensembl	74_37	+1	known	silent	c.60	p.N20	0.832	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	SHOX	HGNC	ENSG00000185960				243	0	0	177	63	26.25
KAL1	0	genome.wustl.edu	37	X	8503692	8503692	+	Silent	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	8503692	8503692	C	T	SNP	KAL1	ENST00000262648	human	ensembl	74_37	-1	known	silent	c.1782	p.T594	0.045	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_WAP-type_4-diS_core,superfamily_Fibronectin_type3,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Fibronectin_type3,pfscan_Fibronectin_type3,prints_WAP-type_4-diS_core	-	no_errors	KAL1	HGNC	ENSG00000011201				34	0	0	25	26	50.9804
PCDH19	0	genome.wustl.edu	37	X	99662749	99662749	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	99662749	99662749	C	T	SNP	PCDH19	ENST00000373034	human	ensembl	74_37	-1	known	missense	c.847	p.D283N	0.981	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH19	HGNC	ENSG00000165194				62	0	0	51	46	47.4227
ENSG00000269175	0	genome.wustl.edu	37	1	101456193	101456193	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	101456193	101456193	A	-	DEL	ENSG00000269175	ENST00000593496	human	ensembl	74_37	+1	known	frame_shift_del	c.187	p.R66fs	0.002	NULL	NULL	-	no_errors	AC093157.1	Clone_based_ensembl_gene	ENSG00000269175				50	0	0	59	12	16.9014
CSF1	0	genome.wustl.edu	37	1	110466431	110466431	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	110466431	110466431	C	-	DEL	CSF1	ENST00000329608	human	ensembl	74_37	+1	known	frame_shift_del	c.1188	p.P398fs	0.001	pfam_MCSF-1,pirsf_MCSF-1	pfam_MCSF-1,superfamily_4_helix_cytokine-like_core,pirsf_MCSF-1	-	no_errors	CSF1	HGNC	ENSG00000184371				153	0	0	154	38	19.7917
SLC16A1	0	genome.wustl.edu	37	1	113471890	113471890	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	113471890	113471890	G	-	DEL	SLC16A1	ENST00000369626	human	ensembl	74_37	-1	known	frame_shift_del	c.41	p.P14fs	1.000	tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A1	HGNC	ENSG00000155380				61	0	0	77	8	9.41176
ADAM30	0	genome.wustl.edu	37	1	120437094	120437095	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	120437094	120437095	-	T	INS	ADAM30	ENST00000369400	human	ensembl	74_37	-1	known	frame_shift_ins	c.1866_1865	p.N622fs	0.003:0.000	smart_ADAM_Cys-rich	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM30	HGNC	ENSG00000134249				123	0	0	148	35	19.1257
MXRA8	0	genome.wustl.edu	37	1	1290109	1290110	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	1290109	1290110	-	G	INS	MXRA8	ENST00000445648	human	ensembl	74_37	-1	known	frame_shift_ins	c.902_901	p.R301fs	0.000:0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	MXRA8	HGNC	ENSG00000162576				12	0	0	16	6	27.2727
MTMR11	0	genome.wustl.edu	37	1	149902648	149902648	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	149902648	149902648	A	-	DEL	MTMR11	ENST00000492824	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				30	0	0	21	12	36.3636
OTUD7B	0	genome.wustl.edu	37	1	149915984	149915984	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	149915984	149915984	G	-	DEL	OTUD7B	ENST00000369135	human	ensembl	74_37	-1	known	frame_shift_del	c.2304	p.Y769fs	0.005	NULL	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7B	HGNC	ENSG00000163113				97	0	0	85	10	10.5263
KPRP	0	genome.wustl.edu	37	1	152732678	152732678	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	152732678	152732678	C	-	DEL	KPRP	ENST00000368773	human	ensembl	74_37	+1	known	frame_shift_del	c.614	p.Q207fs	0.000	NULL	NULL	-	no_errors	KPRP	HGNC	ENSG00000203786				254	0	0	284	52	15.4762
PBXIP1	0	genome.wustl.edu	37	1	154920863	154920864	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	154920863	154920864	-	G	INS	PBXIP1	ENST00000490230	human	ensembl	74_37	-1	known	frame_shift_ins	c.424_423	p.C141fs	0.001:0.000	NULL	NULL	-	no_errors	PBXIP1	HGNC	ENSG00000163346				14	0	0	13	2	13.3333
GON4L	0	genome.wustl.edu	37	1	155785776	155785777	+	RNA	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	155785776	155785777	-	A	INS	GON4L	ENST00000471341	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	GON4L	HGNC	ENSG00000116580				8	0	0	9	3	25
KIAA0907	0	genome.wustl.edu	37	1	155886422	155886423	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	155886422	155886423	CT	-	DEL	KIAA0907	ENST00000368321	human	ensembl	74_37	-1	known	frame_shift_del	c.1547_1546	p.R516fs	1.000:1.000	NULL	NULL	-	no_errors	KIAA0907	HGNC	ENSG00000132680				323	1	0.308642	289	88	23.3422
MIB2	0	genome.wustl.edu	37	1	1559205	1559205	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	1559205	1559205	G	-	DEL	MIB2	ENST00000505820	human	ensembl	74_37	+1	known	frame_shift_del	c.644	p.M217fs	1.000	pfam_Znf_ZZ,smart_Znf_ZZ,pfscan_Znf_ZZ	pfam_Mib_Herc2,pfam_Ankyrin_rpt,pfam_Znf_ZZ,superfamily_Ankyrin_rpt-contain_dom,smart_Znf_ZZ,smart_Ankyrin_rpt,smart_Znf_RING,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_RING,pfscan_Znf_ZZ,prints_Ankyrin_rpt	-	no_errors	MIB2	HGNC	ENSG00000197530				20	0	0	34	5	12.8205
ENSG00000228863	0	genome.wustl.edu	37	1	160640798	160640798	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	160640798	160640798	T	-	DEL	ENSG00000228863	ENST00000598917	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.983	-	-	-	no_errors	RP11-404F10.2	Clone_based_vega_gene	ENSG00000228863				23	0	0	27	7	20.5882
TIPRL	0	genome.wustl.edu	37	1	168169261	168169262	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	168169261	168169262	-	A	INS	TIPRL	ENST00000367833	human	ensembl	74_37	+1	known	frame_shift_ins	c.796_797	p.S268fs	0.001:0.184	NULL	pfam_TIP41-like	-	no_errors	TIPRL	HGNC	ENSG00000143155				65	0	0	92	17	15.5963
CCDC181	0	genome.wustl.edu	37	1	169366580	169366580	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	169366580	169366580	T	-	DEL	CCDC181	ENST00000367806	human	ensembl	74_37	-1	known	frame_shift_del	c.1265	p.K422fs	1.000	NULL	NULL	-	no_errors	CCDC181	HGNC	ENSG00000117477				39	0	0	60	13	17.8082
PADI3	0	genome.wustl.edu	37	1	17603075	17603075	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	17603075	17603075	C	-	DEL	PADI3	ENST00000375460	human	ensembl	74_37	+1	known	frame_shift_del	c.1369	p.V459fs	1.000	pfam_PAD_C,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI3	HGNC	ENSG00000142619				161	1	0.617284	135	33	19.6429
LAMC2	0	genome.wustl.edu	37	1	183203527	183203528	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	183203527	183203528	-	G	INS	LAMC2	ENST00000264144	human	ensembl	74_37	+1	known	frame_shift_ins	c.2246_2247	p.P751fs	0.011:0.072	NULL	pfam_EGF_laminin,pfam_Laminin_B_type_IV,superfamily_Growth_fac_rcpt_N_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin	-	no_errors	LAMC2	HGNC	ENSG00000058085				52	0	0	58	14	19.4444
NEK7	0	genome.wustl.edu	37	1	198222298	198222298	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	198222298	198222298	A	-	DEL	NEK7	ENST00000367385	human	ensembl	74_37	+1	known	frame_shift_del	c.186	p.V65fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK7	HGNC	ENSG00000151414				88	0	0	202	22	9.82143
DDX59	0	genome.wustl.edu	37	1	200635555	200635556	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	200635555	200635556	-	C	INS	DDX59	ENST00000331314	human	ensembl	74_37	-1	known	frame_shift_ins	c.314_313	p.E105fs	1.000:1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197				82	0	0	104	15	12.605
PLEKHA6	0	genome.wustl.edu	37	1	204228411	204228411	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	204228411	204228411	C	-	DEL	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	frame_shift_del	c.982	p.V328fs	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850				100	0	0	108	13	10.7438
TMEM206	0	genome.wustl.edu	37	1	212548596	212548597	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	212548596	212548597	-	T	INS	TMEM206	ENST00000535273	human	ensembl	74_37	-1	known	frame_shift_ins	c.1013_1012	p.S338fs	0.027:0.016	NULL	NULL	-	no_errors	TMEM206	HGNC	ENSG00000065600				136	1	0.729927	129	41	24.1176
HSPG2	0	genome.wustl.edu	37	1	22155955	22155955	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	22155955	22155955	C	-	DEL	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	frame_shift_del	c.11913	p.K3972fs	0.556	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				99	0	0	121	11	8.33333
ENSG00000272750	0	genome.wustl.edu	37	1	222832218	222832218	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	222832218	222832218	T	-	DEL	ENSG00000272750	ENST00000608771	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-378J18.8	Clone_based_vega_gene	ENSG00000272750				46	0	0	48	16	25
OBSCN	0	genome.wustl.edu	37	1	228556591	228556592	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	228556591	228556592	-	T	INS	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	frame_shift_ins	c.19936_19937	p.W6647fs	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				124	0	0	152	19	11.1111
PCNXL2	0	genome.wustl.edu	37	1	233372595	233372595	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	233372595	233372595	G	-	DEL	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	frame_shift_del	c.2354	p.P785fs	0.991	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				210	0	0	248	40	13.8889
PCNXL2	0	genome.wustl.edu	37	1	233394457	233394457	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	233394457	233394457	G	-	DEL	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	frame_shift_del	c.1151	p.P384fs	0.000	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				96	0	0	156	44	22
KIAA1804	0	genome.wustl.edu	37	1	233514890	233514890	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	233514890	233514890	C	-	DEL	KIAA1804	ENST00000366624	human	ensembl	74_37	+1	known	frame_shift_del	c.2138	p.Q715fs	0.128	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674				115	0	0	116	29	20
CHRM3	0	genome.wustl.edu	37	1	240072444	240072444	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	240072444	240072444	A	-	DEL	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	frame_shift_del	c.1693	p.K567fs	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019				79	0	0	111	18	13.9535
TCEB3	0	genome.wustl.edu	37	1	24078403	24078404	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	24078403	24078404	-	A	INS	TCEB3	ENST00000418390	human	ensembl	74_37	+1	known	frame_shift_ins	c.1386_1387	p.N464fs	0.949:0.998	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,pfscan_F-box_dom	-	no_errors	TCEB3	HGNC	ENSG00000011007				245	0	0	274	56	16.9697
OR2T8	0	genome.wustl.edu	37	1	248084550	248084551	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	248084550	248084551	-	A	INS	OR2T8	ENST00000319968	human	ensembl	74_37	+1	known	frame_shift_ins	c.231_232	p.M78fs	0.006:0.004	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T8	HGNC	ENSG00000177462				251	0	0	286	38	11.7284
ARID1A	0	genome.wustl.edu	37	1	27101438	27101438	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	27101438	27101438	C	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.4720	p.P1575fs	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				72	0	0	109	31	22.1429
MAP3K6	0	genome.wustl.edu	37	1	27687422	27687423	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	27687422	27687423	-	C	INS	MAP3K6	ENST00000357582	human	ensembl	74_37	-1	known	frame_shift_ins	c.1910_1909	p.E637fs	1.000:0.994	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K6	HGNC	ENSG00000142733				24	0	0	40	8	16.6667
PTP4A2	0	genome.wustl.edu	37	1	32384717	32384717	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	32384717	32384717	A	-	DEL	PTP4A2	ENST00000532289	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PTP4A2	HGNC	ENSG00000184007				19	0	0	29	3	9.375
RNF19B	0	genome.wustl.edu	37	1	33402541	33402541	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	33402541	33402541	G	-	DEL	RNF19B	ENST00000373456	human	ensembl	74_37	-1	known	frame_shift_del	c.2065	p.R689fs	1.000	NULL	pfam_Znf_C6HC,smart_Znf_RING,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	RNF19B	HGNC	ENSG00000116514				183	0	0	180	16	8.16327
ZMYM4	0	genome.wustl.edu	37	1	35846960	35846960	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	35846960	35846960	A	-	DEL	ZMYM4	ENST00000314607	human	ensembl	74_37	+1	known	frame_shift_del	c.1282	p.K430fs	1.000	NULL	pfam_DUF3504,pfam_Znf_MYM,smart_TRASH_dom	-	no_errors	ZMYM4	HGNC	ENSG00000146463				158	0	0	151	27	15.1685
RLF	0	genome.wustl.edu	37	1	40702138	40702139	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	40702138	40702139	-	A	INS	RLF	ENST00000372771	human	ensembl	74_37	+1	known	frame_shift_ins	c.1764_1765	p.F590fs	0.996:1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RLF	HGNC	ENSG00000117000				86	0	0	144	41	22.1622
CTPS1	0	genome.wustl.edu	37	1	41462979	41462979	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	41462979	41462979	T	-	DEL	CTPS1	ENST00000486889	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	CTPS1	HGNC	ENSG00000171793				49	0	0	65	19	22.619
HIVEP3	0	genome.wustl.edu	37	1	42046106	42046108	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	42046106	42046108	CCT	-	DEL	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	in_frame_del	c.4363_4361	p.E1454in_frame_del	0.982:0.922:1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				247	0	0	253	35	12.1528
WDR65	0	genome.wustl.edu	37	1	43649306	43649306	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	43649306	43649306	A	-	DEL	WDR65	ENST00000528956	human	ensembl	74_37	+1	known	frame_shift_del	c.519	p.N174fs	0.990	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR65	HGNC	ENSG00000243710				80	0	0	126	30	19.2308
ZCCHC11	0	genome.wustl.edu	37	1	52991780	52991780	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	52991780	52991780	T	-	DEL	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	frame_shift_del	c.173	p.N58fs	0.998	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744				140	0	0	153	24	13.5593
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251				84	0	0	57	35	38.0435
ALG6	0	genome.wustl.edu	37	1	63836751	63836751	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	63836751	63836751	A	-	DEL	ALG6	ENST00000487136	human	ensembl	74_37	+1	known	frame_shift_del	c.103	p.T38fs	0.000	NULL	NULL	-	no_errors	ALG6	HGNC	ENSG00000088035				114	0	0	98	17	14.7826
TTLL7	0	genome.wustl.edu	37	1	84335594	84335594	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	84335594	84335594	A	-	DEL	TTLL7	ENST00000472688	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTLL7	HGNC	ENSG00000137941				48	0	0	55	15	21.4286
CTBS	0	genome.wustl.edu	37	1	85020568	85020568	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	85020568	85020568	T	-	DEL	CTBS	ENST00000477677	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTBS	HGNC	ENSG00000117151				10	0	0	21	10	32.2581
CLCA3P	0	genome.wustl.edu	37	1	87108245	87108246	+	RNA	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	87108245	87108246	-	A	INS	CLCA3P	ENST00000284054	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.095:0.018	-	-	-	no_errors	CLCA3P	HGNC	ENSG00000153923				24	0	0	38	6	13.6364
PKN2	0	genome.wustl.edu	37	1	89298681	89298681	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	89298681	89298681	T	-	DEL	PKN2	ENST00000495119	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.054	-	-	-	no_errors	PKN2	HGNC	ENSG00000065243				12	0	0	17	6	26.087
GBP7	0	genome.wustl.edu	37	1	89599010	89599011	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	89599010	89599011	-	T	INS	GBP7	ENST00000294671	human	ensembl	74_37	-1	known	frame_shift_ins	c.1593_1592	p.K532fs	0.000:0.000	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP7	HGNC	ENSG00000213512				253	0	0	285	80	21.9178
ZNF644	0	genome.wustl.edu	37	1	91382413	91382413	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	91382413	91382413	T	-	DEL	ZNF644	ENST00000337393	human	ensembl	74_37	-1	known	frame_shift_del	c.3926	p.K1309fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF644	HGNC	ENSG00000122482				78	0	0	89	22	19.8198
CDC7	0	genome.wustl.edu	37	1	91967357	91967357	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	91967357	91967357	A	-	DEL	CDC7	ENST00000234626	human	ensembl	74_37	+1	known	frame_shift_del	c.84	p.N31fs	0.083	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDC7	HGNC	ENSG00000097046				190	0	0	226	55	19.573
BCAR3	0	genome.wustl.edu	37	1	94032937	94032937	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	94032937	94032937	T	-	DEL	BCAR3	ENST00000260502	human	ensembl	74_37	-1	known	frame_shift_del	c.2198	p.N733fs	0.995	superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,pfscan_RasGRF_CDC25	-	no_errors	BCAR3	HGNC	ENSG00000137936				107	0	0	109	35	24.3056
AGRN	0	genome.wustl.edu	37	1	981860	981861	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	1	981860	981861	-	C	INS	AGRN	ENST00000379370	human	ensembl	74_37	+1	known	frame_shift_ins	c.2995_2996	p.G1002fs	0.000:0.000	NULL	pfam_Laminin_G,pfam_Agrin_NtA,pfam_Kazal_dom,pfam_EGF_laminin,pfam_SEA_dom,pfam_EG-like_dom,superfamily_TIMP-like_OB-fold,superfamily_ConA-like_lec_gl_sf,smart_FacI_MAC,smart_Fol_N,smart_Kazal_dom,smart_EG-like_dom,smart_EGF_laminin,smart_SEA_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Agrin_NtA,pfscan_SEA_dom	-	no_errors	AGRN	HGNC	ENSG00000188157				32	0	0	48	9	15.7895
GBF1	0	genome.wustl.edu	37	10	104120909	104120909	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	104120909	104120909	A	-	DEL	GBF1	ENST00000476019	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GBF1	HGNC	ENSG00000107862				49	0	0	55	9	14.0625
ADD3	0	genome.wustl.edu	37	10	111893350	111893350	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	111893350	111893350	A	-	DEL	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	frame_shift_del	c.2095	p.K701fs	1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700				143	0	0	163	27	14.2105
KIAA1598	0	genome.wustl.edu	37	10	118719757	118719757	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	118719757	118719757	A	-	DEL	KIAA1598	ENST00000490615	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KIAA1598	HGNC	ENSG00000187164				45	0	0	80	22	21.5686
INPP5F	0	genome.wustl.edu	37	10	121551680	121551681	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	121551680	121551681	-	T	INS	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	frame_shift_ins	c.624_625	p.W210fs	0.999:1.000	pfam_Syja_N,pfscan_Syja_N	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825				96	0	0	117	30	20.4082
OAT	0	genome.wustl.edu	37	10	126091634	126091634	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	126091634	126091634	A	-	DEL	OAT	ENST00000471127	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OAT	HGNC	ENSG00000065154				184	1	0.540541	200	46	18.6992
ZRANB1	0	genome.wustl.edu	37	10	126673560	126673561	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	126673560	126673561	-	A	INS	ZRANB1	ENST00000359653	human	ensembl	74_37	+1	known	frame_shift_ins	c.2126_2127	p.*710fs	1.000:0.994	NULL	pfam_OTU,pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_OTU,pfscan_Znf_RanBP2	-	no_errors	ZRANB1	HGNC	ENSG00000019995				16	0	0	28	7	20
MKI67	0	genome.wustl.edu	37	10	129905111	129905112	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	129905111	129905112	-	TG	INS	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	frame_shift_ins	c.4993_4992	p.E1664fs	0.000:0.000	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773				270	0	0	416	109	20.7619
FUOM	0	genome.wustl.edu	37	10	135169074	135169074	+	RNA	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	135169074	135169074	C	-	DEL	FUOM	ENST00000478895	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FUOM	HGNC	ENSG00000148803				43	0	0	46	19	29.2308
MTG1	0	genome.wustl.edu	37	10	135233645	135233645	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	135233645	135233645	C	-	DEL	MTG1	ENST00000317502	human	ensembl	74_37	+1	known	frame_shift_del	c.981	p.P329fs	0.000	NULL	pfam_GTP_binding_domain,superfamily_P-loop_NTPase,pirsf_GTPase_MTG1,tigrfam_GTP-bd_ribosome_bgen_YlqF	-	no_errors	MTG1	HGNC	ENSG00000148824				113	0	0	141	11	7.23684
FRMD4A	0	genome.wustl.edu	37	10	13696451	13696452	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	13696451	13696452	-	G	INS	FRMD4A	ENST00000357447	human	ensembl	74_37	-1	known	frame_shift_ins	c.3015_3014	p.S1006fs	0.992:1.000	NULL	pfam_DUF3338,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	-	no_errors	FRMD4A	HGNC	ENSG00000151474				133	0	0	142	11	7.18954
KIAA1217	0	genome.wustl.edu	37	10	24833919	24833919	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	24833919	24833919	G	-	DEL	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	frame_shift_del	c.5221	p.A1742fs	0.215	NULL	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549				250	0	0	315	27	7.89474
WAC	0	genome.wustl.edu	37	10	28908508	28908508	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	28908508	28908508	A	-	DEL	WAC	ENST00000354911	human	ensembl	74_37	+1	known	frame_shift_del	c.1917	p.N641fs	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WAC	HGNC	ENSG00000095787				60	0	0	68	18	20.9302
ENSG00000243349	0	genome.wustl.edu	37	10	45652303	45652304	+	RNA	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	45652303	45652304	-	A	INS	ENSG00000243349	ENST00000427229	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.299:0.277	-	-	-	no_errors	RP11-445N18.7	Clone_based_vega_gene	ENSG00000243349				31	0	0	35	10	22.2222
SYT15	0	genome.wustl.edu	37	10	46964014	46964015	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	46964014	46964015	AC	-	DEL	SYT15	ENST00000374323	human	ensembl	74_37	-1	known	frame_shift_del	c.1108_1107	p.F370fs	0.992:0.996	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT15	HGNC	ENSG00000204176				121	0	0	134	10	6.94444
NET1	0	genome.wustl.edu	37	10	5495005	5495005	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	5495005	5495005	T	-	DEL	NET1	ENST00000465087	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NET1	HGNC	ENSG00000173848				21	0	0	29	9	23.6842
FAM13C	0	genome.wustl.edu	37	10	61011259	61011260	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	61011259	61011260	-	A	INS	FAM13C	ENST00000435852	human	ensembl	74_37	-1	putative	frame_shift_ins	c.1710_1709	p.L570fs	0.001:0.008	NULL	NULL	-	no_errors	FAM13C	HGNC	ENSG00000148541				93	0	0	128	38	22.8916
KCNMA1	0	genome.wustl.edu	37	10	78943216	78943216	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	78943216	78943216	G	-	DEL	KCNMA1	ENST00000406533	human	ensembl	74_37	-1	known	frame_shift_del	c.771	p.V258fs	0.005	pfam_Ion_trans_dom,prints_K_chnl	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_RCK_N,prints_K_chnl_Ca-activ_BK_asu,prints_K_chnl	-	no_errors	KCNMA1	HGNC	ENSG00000156113				27	0	0	75	7	8.53659
IDE	0	genome.wustl.edu	37	10	94294479	94294479	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	94294479	94294479	A	-	DEL	IDE	ENST00000265986	human	ensembl	74_37	-1	known	frame_shift_del	c.347	p.L116fs	1.000	pfam_Pept_M16_N,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	IDE	HGNC	ENSG00000119912				69	0	0	63	21	25
ZNF518A	0	genome.wustl.edu	37	10	97918856	97918856	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	10	97918856	97918856	A	-	DEL	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.867	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853				40	0	0	65	18	21.6867
CASP5	0	genome.wustl.edu	37	11	104879687	104879687	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	104879687	104879687	T	-	DEL	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	frame_shift_del	c.67	p.R23fs	0.000	NULL	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757				40	0	0	81	14	14.7368
NPAT	0	genome.wustl.edu	37	11	108044069	108044069	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	108044069	108044069	T	-	DEL	NPAT	ENST00000278612	human	ensembl	74_37	-1	known	frame_shift_del	c.1642	p.S548fs	0.000	NULL	smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	NPAT	HGNC	ENSG00000149308				61	0	0	80	25	23.8095
NXPE1	0	genome.wustl.edu	37	11	114393133	114393134	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	114393133	114393134	-	T	INS	NXPE1	ENST00000424269	human	ensembl	74_37	-1	known	frame_shift_ins	c.1201_1200	p.H400fs	0.443:0.117	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE1	HGNC	ENSG00000095110				78	0	0	161	35	17.8571
CD3G	0	genome.wustl.edu	37	11	118220583	118220583	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	118220583	118220583	A	-	DEL	CD3G	ENST00000532917	human	ensembl	74_37	+1	known	frame_shift_del	c.205	p.K71fs	0.000	smart_Ig_sub2	pfam_Phos_immunorcpt_sig_ITAM,smart_Ig_sub2,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM	-	no_errors	CD3G	HGNC	ENSG00000160654				140	0	0	128	41	24.2604
MFRP	0	genome.wustl.edu	37	11	119213688	119213688	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	119213688	119213688	G	-	DEL	MFRP	ENST00000449574	human	ensembl	74_37	-1	known	frame_shift_del	c.1150	p.H384fs	0.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Frizzled_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Frizzled_dom,pfscan_CUB_dom,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	MFRP	HGNC	ENSG00000235718				30	0	0	28	8	22.2222
SORL1	0	genome.wustl.edu	37	11	121475905	121475905	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	121475905	121475905	A	-	DEL	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	frame_shift_del	c.4735	p.M1581fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642				231	1	0.431034	240	52	17.8082
CHEK1	0	genome.wustl.edu	37	11	125505378	125505378	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	125505378	125505378	A	-	DEL	CHEK1	ENST00000438015	human	ensembl	74_37	+1	known	frame_shift_del	c.668	p.T226fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CHEK1	HGNC	ENSG00000149554				124	0	0	150	36	19.3548
SRPR	0	genome.wustl.edu	37	11	126137087	126137087	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	126137087	126137087	T	-	DEL	SRPR	ENST00000332118	human	ensembl	74_37	-1	known	frame_shift_del	c.509	p.K170fs	0.991	pfam_Sig_recog_particle_rcpt_asu_N	pfam_Sig_recog_particle_rcpt_asu_N,pfam_SRP54_GTPase_dom,pfam_ArgK,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_Signal_recog_particl_SRP54_hlx,superfamily_Longin-like_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom	-	no_errors	SRPR	HGNC	ENSG00000182934				549	1	0.181818	477	112	19.0153
NTM	0	genome.wustl.edu	37	11	131240692	131240692	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	131240692	131240692	A	-	DEL	NTM	ENST00000477098	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.619	-	-	-	no_errors	NTM	HGNC	ENSG00000182667				68	0	0	88	16	15.3846
KCNA4	0	genome.wustl.edu	37	11	30033563	30033563	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	30033563	30033563	A	-	DEL	KCNA4	ENST00000328224	human	ensembl	74_37	-1	known	frame_shift_del	c.663	p.F221fs	0.902	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255				111	0	0	100	22	18.0328
ARL14EP	0	genome.wustl.edu	37	11	30352753	30352754	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	30352753	30352754	-	A	INS	ARL14EP	ENST00000282032	human	ensembl	74_37	+1	known	frame_shift_ins	c.258_259	p.N88fs	0.999:1.000	NULL	NULL	-	no_errors	ARL14EP	HGNC	ENSG00000152219				151	0	0	198	45	18.5185
PAMR1	0	genome.wustl.edu	37	11	35513670	35513670	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	35513670	35513670	C	-	DEL	PAMR1	ENST00000278360	human	ensembl	74_37	-1	known	frame_shift_del	c.302	p.G101fs	0.999	smart_EG-like_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_EG-like_dom,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1	-	no_errors	PAMR1	HGNC	ENSG00000149090				406	0	0	478	83	14.795
GYLTL1B	0	genome.wustl.edu	37	11	45948373	45948373	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	45948373	45948373	C	-	DEL	GYLTL1B	ENST00000325468	human	ensembl	74_37	+1	known	frame_shift_del	c.1276	p.R428fs	0.023	NULL	pfam_Glyco_trans_8	-	no_errors	GYLTL1B	HGNC	ENSG00000165905				82	0	0	98	20	16.9492
LRP4	0	genome.wustl.edu	37	11	46911510	46911510	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	46911510	46911510	G	-	DEL	LRP4	ENST00000378623	human	ensembl	74_37	-1	known	frame_shift_del	c.2077	p.Q693fs	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP4	HGNC	ENSG00000134569				146	0	0	161	32	16.5803
ARFGAP2	0	genome.wustl.edu	37	11	47196853	47196853	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	47196853	47196853	A	-	DEL	ARFGAP2	ENST00000524782	human	ensembl	74_37	-1	known	frame_shift_del	c.276	p.R93fs	1.000	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ARFGAP2	HGNC	ENSG00000149182				189	0	0	211	20	8.65801
OR4C11	0	genome.wustl.edu	37	11	55371595	55371596	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	55371595	55371596	AG	-	DEL	OR4C11	ENST00000302231	human	ensembl	74_37	-1	known	frame_shift_del	c.255_254	p.S85fs	0.000:0.002	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C11	HGNC	ENSG00000172188				102	0	0	168	39	18.8406
OR4P4	0	genome.wustl.edu	37	11	55406142	55406142	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	55406142	55406142	T	-	DEL	OR4P4	ENST00000314612	human	ensembl	74_37	+1	known	frame_shift_del	c.309	p.F105fs	0.097	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4P4	HGNC	ENSG00000181927				125	0	0	272	47	14.7335
TRIM51	0	genome.wustl.edu	37	11	55653610	55653610	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	55653610	55653610	A	-	DEL	TRIM51	ENST00000449290	human	ensembl	74_37	+1	known	frame_shift_del	c.423	p.M144fs	0.001	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM51	HGNC	ENSG00000124900				16	0	0	53	28	34.5679
SYT7	0	genome.wustl.edu	37	11	61291307	61291307	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	61291307	61291307	C	-	DEL	SYT7	ENST00000263846	human	ensembl	74_37	-1	known	frame_shift_del	c.899	p.G300fs	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT7	HGNC	ENSG00000011347				601	0	0	561	110	16.3934
RPLP0P2	0	genome.wustl.edu	37	11	61405179	61405180	+	RNA	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	61405179	61405180	AA	-	DEL	RPLP0P2	ENST00000496593	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.975:0.974	-	-	-	no_errors	RPLP0P2	HGNC	ENSG00000243742				26	0	0	40	6	13.0435
CDHR5	0	genome.wustl.edu	37	11	618807	618807	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	618807	618807	G	-	DEL	CDHR5	ENST00000358353	human	ensembl	74_37	-1	known	frame_shift_del	c.1752	p.S585fs	0.006	NULL	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	-	no_errors	CDHR5	HGNC	ENSG00000099834				207	0	0	232	30	11.4504
CDHR5	0	genome.wustl.edu	37	11	618999	618999	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	618999	618999	C	-	DEL	CDHR5	ENST00000358353	human	ensembl	74_37	-1	known	frame_shift_del	c.1560	p.P522fs	0.000	NULL	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	-	no_errors	CDHR5	HGNC	ENSG00000099834				247	0	0	216	41	15.9533
RTN3	0	genome.wustl.edu	37	11	63525788	63525788	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	63525788	63525788	T	-	DEL	RTN3	ENST00000354497	human	ensembl	74_37	+1	putative	frame_shift_del	c.570	p.L193fs	0.998	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318				62	0	0	74	19	20.4301
MARK2	0	genome.wustl.edu	37	11	63670244	63670244	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	63670244	63670244	C	-	DEL	MARK2	ENST00000402010	human	ensembl	74_37	+1	known	frame_shift_del	c.1406	p.S471fs	0.906	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK2	HGNC	ENSG00000072518				48	0	0	62	12	16.2162
MALAT1	0	genome.wustl.edu	37	11	65268480	65268481	+	RNA	DEL	TT	TT	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	65268480	65268481	TT	-	DEL	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				38	0	0	31	16	34.0426
PPP1CA	0	genome.wustl.edu	37	11	67165933	67165933	+	RNA	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	67165933	67165933	C	-	DEL	PPP1CA	ENST00000532446	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.080	-	-	-	no_errors	PPP1CA	HGNC	ENSG00000172531				27	0	0	31	7	18.4211
ORAOV1	0	genome.wustl.edu	37	11	69488078	69488079	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	69488078	69488079	-	C	INS	ORAOV1	ENST00000279147	human	ensembl	74_37	-1	known	frame_shift_ins	c.62_61	p.E21fs	1.000:1.000	NULL	pfam_Essential_protein_Yae1_N	-	no_errors	ORAOV1	HGNC	ENSG00000149716				134	0	0	154	30	16.3043
PPFIA1	0	genome.wustl.edu	37	11	70183500	70183500	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	70183500	70183500	A	-	DEL	PPFIA1	ENST00000253925	human	ensembl	74_37	+1	known	frame_shift_del	c.1458	p.K488fs	0.002	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA1	HGNC	ENSG00000131626				41	0	0	34	12	26.087
POLD3	0	genome.wustl.edu	37	11	74336609	74336609	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	74336609	74336609	A	-	DEL	POLD3	ENST00000263681	human	ensembl	74_37	+1	known	frame_shift_del	c.890	p.R300fs	0.998	pfam_DNA_polymerase_subunit_Cdc27	pfam_DNA_polymerase_subunit_Cdc27	-	no_errors	POLD3	HGNC	ENSG00000077514				60	0	0	53	21	28.3784
ENSG00000254988	0	genome.wustl.edu	37	11	76669997	76669998	+	RNA	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	76669997	76669998	-	T	INS	ENSG00000254988	ENST00000530190	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.973:0.003	-	-	-	no_errors	CTD-2547H18.1	Clone_based_vega_gene	ENSG00000254988				85	0	0	87	25	22.3214
RIC3	0	genome.wustl.edu	37	11	8160039	8160041	+	RNA	DEL	AAA	AAA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	8160039	8160041	AAA	-	DEL	RIC3	ENST00000524799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	RIC3	HGNC	ENSG00000166405				9	0	0	18	5	21.7391
C11orf82	0	genome.wustl.edu	37	11	82644463	82644463	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	82644463	82644463	A	-	DEL	C11orf82	ENST00000430323	human	ensembl	74_37	+1	known	frame_shift_del	c.2083	p.K696fs	0.029	NULL	pfam_Rep_factor-A_C,superfamily_NA-bd_OB-fold	-	no_errors	C11orf82	HGNC	ENSG00000165490				239	0	0	260	52	16.6667
SCARNA9	0	genome.wustl.edu	37	11	93454920	93454921	+	RNA	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	93454920	93454921	-	G	INS	SCARNA9	ENST00000530422	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007:0.011	-	-	-	no_errors	SCARNA9	HGNC	ENSG00000254911				41	0	0	53	13	19.697
HEPHL1	0	genome.wustl.edu	37	11	93808491	93808491	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	93808491	93808491	T	-	DEL	HEPHL1	ENST00000315765	human	ensembl	74_37	+1	known	frame_shift_del	c.1656	p.G553fs	0.999	pfam_Cu-oxidase_3,superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPHL1	HGNC	ENSG00000181333				24	0	0	69	17	19.7674
CEP57	0	genome.wustl.edu	37	11	95555113	95555113	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	11	95555113	95555113	A	-	DEL	CEP57	ENST00000325542	human	ensembl	74_37	+1	known	frame_shift_del	c.778	p.K262fs	1.000	pfam_Cep57_MT-bd_dom	pfam_Cep57_MT-bd_dom	-	no_errors	CEP57	HGNC	ENSG00000166037				32	0	0	52	10	16.129
TAS2R8	0	genome.wustl.edu	37	12	10958846	10958846	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	10958846	10958846	A	-	DEL	TAS2R8	ENST00000240615	human	ensembl	74_37	-1	known	frame_shift_del	c.734	p.F245fs	0.001	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	TAS2R8	HGNC	ENSG00000121314				28	0	0	85	28	24.7788
TAS2R9	0	genome.wustl.edu	37	12	10962115	10962115	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	10962115	10962115	A	-	DEL	TAS2R9	ENST00000240691	human	ensembl	74_37	-1	known	frame_shift_del	c.560	p.V187fs	0.000	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	TAS2R9	HGNC	ENSG00000121381				27	0	0	113	20	15.0376
SLC8B1	0	genome.wustl.edu	37	12	113758221	113758223	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	113758221	113758223	GAA	-	DEL	SLC8B1	ENST00000202831	human	ensembl	74_37	-1	known	in_frame_del	c.609_607	p.F203in_frame_del	1.000:1.000:1.000	pfam_NaCa_Exmemb	pfam_NaCa_Exmemb	-	no_errors	SLC8B1	HGNC	ENSG00000089060				438	0	0	403	75	15.6904
PRB4	0	genome.wustl.edu	37	12	11461669	11461669	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	11461669	11461669	G	-	DEL	PRB4	ENST00000279575	human	ensembl	74_37	-1	known	frame_shift_del	c.248	p.P83fs	0.167	NULL	NULL	-	no_errors	PRB4	HGNC	ENSG00000230657				999	0	0	1452	78	5.09804
SRSF9	0	genome.wustl.edu	37	12	120903592	120903593	+	Splice_Site	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	120903592	120903593	-	A	INS	SRSF9	ENST00000229390	human	ensembl	74_37	-1	known	splice_site_ins	c.189-3_189-2	e2-2	1.000:0.228	-	-	-	no_errors	SRSF9	HGNC	ENSG00000111786				60	0	0	70	5	6.66667
MLEC	0	genome.wustl.edu	37	12	121134157	121134158	+	In_Frame_Ins	INS	-	-	AAG			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	121134157	121134158	-	AAG	INS	MLEC	ENST00000228506	human	ensembl	74_37	+1	known	in_frame_ins	c.688_689	p.234in_frame_insE	1.000:1.000	NULL	pfam_Malectin	-	no_errors	MLEC	HGNC	ENSG00000110917				233	0	0	321	68	17.4807
HNF1A	0	genome.wustl.edu	37	12	121432117	121432118	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	121432117	121432118	GC	-	DEL	HNF1A	ENST00000257555	human	ensembl	74_37	+1	known	frame_shift_del	c.864_865	p.P291fs	0.998:1.000	pfam_HNF1b_C	pfam_HNF1b_C,pfam_HNF-1_N,pfam_HNF1a_C,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100				14	0	0	18	2	10
P2RX4	0	genome.wustl.edu	37	12	121666642	121666643	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	121666642	121666643	AC	-	DEL	P2RX4	ENST00000337233	human	ensembl	74_37	+1	known	frame_shift_del	c.720_721	p.H241fs	0.051:0.740	pfam_P2X_purnocptor,prints_P2X1_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X4_purnocptor,prints_P2X_purnocptor,prints_P2X1_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX4	HGNC	ENSG00000135124				216	0	0	215	54	20.0743
NCOR2	0	genome.wustl.edu	37	12	124832800	124832801	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	124832800	124832801	-	G	INS	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	frame_shift_ins	c.3926_3925	p.H1309fs	0.936:0.940	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498				107	0	0	118	17	12.5926
ZNF10	0	genome.wustl.edu	37	12	133732700	133732701	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	133732700	133732701	-	A	INS	ZNF10	ENST00000248211	human	ensembl	74_37	+1	known	frame_shift_ins	c.868_869	p.P292fs	1.000:1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF10	HGNC	ENSG00000256223				85	0	0	128	29	18.4713
TM7SF3	0	genome.wustl.edu	37	12	27152717	27152717	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	27152717	27152717	A	-	DEL	TM7SF3	ENST00000539399	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TM7SF3	HGNC	ENSG00000064115				29	0	0	21	6	22.2222
KMT2D	0	genome.wustl.edu	37	12	49445526	49445526	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	49445526	49445526	G	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.1940	p.P647fs	0.001	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				81	0	0	89	22	19.8198
TUBA1A	0	genome.wustl.edu	37	12	49580268	49580268	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	49580268	49580268	G	-	DEL	TUBA1A	ENST00000546918	human	ensembl	74_37	-1	putative	frame_shift_del	c.352	p.L118fs	0.061	NULL	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,prints_Tubulin,prints_Alpha_tubulin	-	no_errors	TUBA1A	HGNC	ENSG00000167552				114	0	0	121	25	17.1233
PRPF40B	0	genome.wustl.edu	37	12	50025258	50025258	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	50025258	50025258	C	-	DEL	PRPF40B	ENST00000548825	human	ensembl	74_37	+1	known	frame_shift_del	c.159	p.M56fs	0.994	NULL	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	PRPF40B	HGNC	ENSG00000110844				339	1	0.294118	298	83	21.7848
ACVR1B	0	genome.wustl.edu	37	12	52380736	52380736	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	52380736	52380736	T	-	DEL	ACVR1B	ENST00000415850	human	ensembl	74_37	+1	known	frame_shift_del	c.1271	p.C426fs	0.007	smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ACVR1B	HGNC	ENSG00000135503				138	0	0	163	30	15.544
ATF7	0	genome.wustl.edu	37	12	53928408	53928408	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	53928408	53928408	G	-	DEL	ATF7	ENST00000328463	human	ensembl	74_37	-1	known	frame_shift_del	c.471	p.T158fs	0.951	pirsf_TF_cAMP-dep	pfam_bZIP,smart_Znf_C2H2-like,smart_bZIP,pirsf_TF_cAMP-dep,pfscan_Znf_C2H2,pfscan_bZIP	-	no_errors	ATF7	HGNC	ENSG00000170653				99	0	0	116	21	15.3285
CBX5	0	genome.wustl.edu	37	12	54645832	54645832	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	54645832	54645832	T	-	DEL	CBX5	ENST00000209875	human	ensembl	74_37	-1	known	frame_shift_del	c.317	p.K106fs	1.000	superfamily_Chromodomain-like	pfam_Chromo_shadow_dom,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Chromo_shadow_dom,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX5	HGNC	ENSG00000094916				382	1	0.261097	372	93	20
OR6C76	0	genome.wustl.edu	37	12	55820730	55820730	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	55820730	55820730	A	-	DEL	OR6C76	ENST00000328314	human	ensembl	74_37	+1	known	frame_shift_del	c.693	p.A234fs	0.602	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C76	HGNC	ENSG00000185821				40	0	0	58	14	19.4444
OR6C76	0	genome.wustl.edu	37	12	55820959	55820960	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	55820959	55820960	AA	-	DEL	OR6C76	ENST00000328314	human	ensembl	74_37	+1	known	frame_shift_del	c.922_923	p.K311fs	0.016:0.019	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C76	HGNC	ENSG00000185821				24	0	0	42	19	31.1475
NACA	0	genome.wustl.edu	37	12	57114418	57114418	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	57114418	57114418	G	-	DEL	NACA	ENST00000454682	human	ensembl	74_37	-1	known	frame_shift_del	c.896	p.P299fs	0.016	NULL	pfam_Nas_poly-pep-assoc_cplx_dom,superfamily_UBA-like,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	NACA	HGNC	ENSG00000196531				72	0	0	88	24	21.4286
ARHGEF25	0	genome.wustl.edu	37	12	58006825	58006825	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	58006825	58006825	C	-	DEL	ARHGEF25	ENST00000333972	human	ensembl	74_37	+1	known	frame_shift_del	c.327	p.P111fs	0.323	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF25	HGNC	ENSG00000240771				77	0	0	91	15	14.1509
CD9	0	genome.wustl.edu	37	12	6347089	6347089	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	6347089	6347089	T	-	DEL	CD9	ENST00000481267	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	CD9	HGNC	ENSG00000010278				18	0	0	16	6	27.2727
NUP107	0	genome.wustl.edu	37	12	69126366	69126366	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	69126366	69126366	A	-	DEL	NUP107	ENST00000401003	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NUP107	HGNC	ENSG00000111581				14	0	0	14	16	53.3333
ZFC3H1	0	genome.wustl.edu	37	12	72038781	72038781	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	72038781	72038781	T	-	DEL	ZFC3H1	ENST00000378743	human	ensembl	74_37	-1	known	frame_shift_del	c.1155	p.K385fs	1.000	NULL	pfam_Putative_zinc-finger_domain,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	ZFC3H1	HGNC	ENSG00000133858				43	0	0	75	21	21.875
OTOGL	0	genome.wustl.edu	37	12	80750687	80750687	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	80750687	80750687	T	-	DEL	OTOGL	ENST00000458043	human	ensembl	74_37	+1	known	frame_shift_del	c.5985	p.C1997fs	0.993	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_AbfB,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	OTOGL	HGNC	ENSG00000165899				21	0	0	56	8	12.5
MGAT4C	0	genome.wustl.edu	37	12	86374168	86374168	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	86374168	86374168	T	-	DEL	MGAT4C	ENST00000393205	human	ensembl	74_37	-1	known	frame_shift_del	c.423	p.G142fs	1.000	pfam_Glyco_transf_54	pfam_Glyco_transf_54,superfamily_LSM_dom	-	no_errors	MGAT4C	HGNC	ENSG00000182050				42	0	0	57	20	25.974
ATP2B1	0	genome.wustl.edu	37	12	90028897	90028898	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	12	90028897	90028898	-	T	INS	ATP2B1	ENST00000261173	human	ensembl	74_37	-1	known	frame_shift_ins	c.538_537	p.Q179fs	1.000:0.960	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B1	HGNC	ENSG00000070961				154	0	0	232	47	16.8459
PCID2	0	genome.wustl.edu	37	13	113834514	113834514	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	113834514	113834514	T	-	DEL	PCID2	ENST00000246505	human	ensembl	74_37	-1	known	frame_shift_del	c.980	p.K327fs	1.000	smart_PAM	pfam_PCI_dom,smart_PAM	-	no_errors	PCID2	HGNC	ENSG00000126226				195	0	0	194	47	19.5021
SAP18	0	genome.wustl.edu	37	13	21720931	21720931	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	21720931	21720931	A	-	DEL	SAP18	ENST00000471009	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	SAP18	HGNC	ENSG00000150459				49	0	0	65	13	16.6667
C1QTNF9B	0	genome.wustl.edu	37	13	24465712	24465713	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	24465712	24465713	-	C	INS	C1QTNF9B	ENST00000382137	human	ensembl	74_37	-1	known	frame_shift_ins	c.718_717	p.K239fs	0.981:0.959	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF9B	HGNC	ENSG00000205863				320	0	0	332	73	18.0247
RNF17	0	genome.wustl.edu	37	13	25362211	25362211	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	25362211	25362211	A	-	DEL	RNF17	ENST00000255324	human	ensembl	74_37	+1	known	frame_shift_del	c.697	p.N235fs	1.000	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor,pfscan_Znf_RING	-	no_errors	RNF17	HGNC	ENSG00000132972				36	0	0	67	26	27.957
WASF3	0	genome.wustl.edu	37	13	27255387	27255387	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	27255387	27255387	C	-	DEL	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	frame_shift_del	c.913	p.P307fs	0.975	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970				103	0	0	112	38	25.3333
NAA16	0	genome.wustl.edu	37	13	41941577	41941577	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	41941577	41941577	T	-	DEL	NAA16	ENST00000379406	human	ensembl	74_37	+1	known	frame_shift_del	c.1542	p.F516fs	1.000	pirsf_NatA_aux_su	pfam_TPR_2,pfam_NatA_aux_su,pfam_TPR_1,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA16	HGNC	ENSG00000172766				53	0	0	80	23	22.3301
ABCC4	0	genome.wustl.edu	37	13	95727814	95727817	+	RNA	DEL	ACAG	ACAG	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	ACAG	ACAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	95727814	95727817	ACAG	-	DEL	ABCC4	ENST00000467685	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	ABCC4	HGNC	ENSG00000125257				52	0	0	84	14	14.2857
ABCC4	0	genome.wustl.edu	37	13	95735449	95735449	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	13	95735449	95735449	A	-	DEL	ABCC4	ENST00000376887	human	ensembl	74_37	-1	known	frame_shift_del	c.2631	p.L878fs	0.318	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257				74	0	0	100	15	13.0435
TEP1	0	genome.wustl.edu	37	14	20846338	20846338	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	20846338	20846338	C	-	DEL	TEP1	ENST00000262715	human	ensembl	74_37	-1	known	frame_shift_del	c.5566	p.V1856fs	0.030	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_TROVE,pfam_TEP1_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_NACHT_NTPase,pfscan_TROVE,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TEP1	HGNC	ENSG00000129566				198	0	0	203	20	8.96861
AP1G2	0	genome.wustl.edu	37	14	24036397	24036397	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	24036397	24036397	C	-	DEL	AP1G2	ENST00000308724	human	ensembl	74_37	-1	known	frame_shift_del	c.127	p.D43fs	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP1_complex_gsu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP1_complex_gsu,pfscan_Clathrin_g-adaptin_app	-	no_errors	AP1G2	HGNC	ENSG00000213983				73	0	0	75	10	11.7647
NYNRIN	0	genome.wustl.edu	37	14	24877215	24877215	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	24877215	24877215	C	-	DEL	NYNRIN	ENST00000382554	human	ensembl	74_37	+1	known	frame_shift_del	c.339	p.P115fs	0.001	NULL	pfam_RNase_Zc3h12,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	-	no_errors	NYNRIN	HGNC	ENSG00000205978				115	0	0	138	16	10.3896
SEC23A	0	genome.wustl.edu	37	14	39533937	39533937	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	39533937	39533937	T	-	DEL	SEC23A	ENST00000553925	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.006	-	-	-	no_errors	SEC23A	HGNC	ENSG00000100934				9	0	0	9	3	25
MIS18BP1	0	genome.wustl.edu	37	14	45693722	45693722	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	45693722	45693722	T	-	DEL	MIS18BP1	ENST00000310806	human	ensembl	74_37	-1	known	frame_shift_del	c.2068	p.S690fs	0.797	NULL	pfam_SANTA,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MIS18BP1	HGNC	ENSG00000129534				244	0	0	211	78	26.9896
ARID4A	0	genome.wustl.edu	37	14	58817949	58817949	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	58817949	58817949	A	-	DEL	ARID4A	ENST00000355431	human	ensembl	74_37	+1	known	frame_shift_del	c.1563	p.N523fs	1.000	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,smart_Chromo_domain/shadow,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4A	HGNC	ENSG00000032219				164	0	0	218	53	19.5572
JKAMP	0	genome.wustl.edu	37	14	59951744	59951744	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	59951744	59951744	A	-	DEL	JKAMP	ENST00000557560	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	JKAMP	HGNC	ENSG00000050130				47	0	0	41	12	22.6415
PPP1R36	0	genome.wustl.edu	37	14	65035126	65035126	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	65035126	65035126	A	-	DEL	PPP1R36	ENST00000298705	human	ensembl	74_37	+1	known	frame_shift_del	c.494	p.N167fs	1.000	NULL	NULL	-	no_errors	PPP1R36	HGNC	ENSG00000165807				67	0	0	62	14	18.4211
ENSG00000259648	0	genome.wustl.edu	37	14	68082888	68082888	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	68082888	68082888	A	-	DEL	ENSG00000259648	ENST00000559968	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.971	-	-	-	no_errors	RP11-643G16.4	Clone_based_vega_gene	ENSG00000259648				46	0	0	82	24	22.6415
SRSF5	0	genome.wustl.edu	37	14	70238228	70238228	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	70238228	70238228	A	-	DEL	SRSF5	ENST00000556587	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	SRSF5	HGNC	ENSG00000100650				63	0	0	93	27	22.5
DPF3	0	genome.wustl.edu	37	14	73190445	73190445	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	73190445	73190445	A	-	DEL	DPF3	ENST00000556238	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.887	-	-	-	no_errors	DPF3	HGNC	ENSG00000205683				122	1	0.813008	134	52	27.957
C14orf169	0	genome.wustl.edu	37	14	73959864	73959864	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	73959864	73959864	A	-	DEL	C14orf169	ENST00000531973	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C14orf169	HGNC	ENSG00000255242				86	0	0	101	30	22.9008
TTLL5	0	genome.wustl.edu	37	14	76420882	76420882	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	76420882	76420882	T	-	DEL	TTLL5	ENST00000554972	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	TTLL5	HGNC	ENSG00000119685				61	0	0	69	11	13.75
STON2	0	genome.wustl.edu	37	14	81743374	81743374	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	14	81743374	81743374	C	-	DEL	STON2	ENST00000267540	human	ensembl	74_37	-1	known	frame_shift_del	c.2281	p.A761fs	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C	pfam_Stonin2_N,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C,pfscan_SHD	-	no_errors	STON2	HGNC	ENSG00000140022				137	0	0	188	43	18.6147
EIF3J	0	genome.wustl.edu	37	15	44843099	44843099	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	44843099	44843099	A	-	DEL	EIF3J	ENST00000261868	human	ensembl	74_37	+1	known	frame_shift_del	c.173	p.E61fs	1.000	pfam_eIF3j	pfam_eIF3j	-	no_errors	EIF3J	HGNC	ENSG00000104131				114	0	0	170	31	15.4229
ENSG00000259479	0	genome.wustl.edu	37	15	45123755	45123756	+	RNA	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	45123755	45123756	-	C	INS	ENSG00000259479	ENST00000561384	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.632:0.983	-	-	-	no_errors	CTD-2008A1.2	Clone_based_vega_gene	ENSG00000259479				13	0	0	17	3	15
AP4E1	0	genome.wustl.edu	37	15	51207860	51207860	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	51207860	51207860	T	-	DEL	AP4E1	ENST00000561004	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.979	-	-	-	no_errors	AP4E1	HGNC	ENSG00000081014				44	0	0	37	14	27.451
ENSG00000259241	0	genome.wustl.edu	37	15	51987960	51987961	+	RNA	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	51987960	51987961	AA	-	DEL	ENSG00000259241	ENST00000559918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006:0.012	-	-	-	no_errors	RP11-313P18.2	Clone_based_vega_gene	ENSG00000259241				23	0	0	19	5	20.8333
NARG2	0	genome.wustl.edu	37	15	60745782	60745782	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	60745782	60745782	A	-	DEL	NARG2	ENST00000561114	human	ensembl	74_37	-1	putative	frame_shift_del	c.1145	p.F382fs	0.000	NULL	NULL	-	no_errors	NARG2	HGNC	ENSG00000128915				29	0	0	63	17	21.25
HERC1	0	genome.wustl.edu	37	15	63918305	63918306	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	63918305	63918306	-	G	INS	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	frame_shift_ins	c.13154_13153	p.Q4385fs	1.000:1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657				44	0	0	52	10	16.129
CSNK1G1	0	genome.wustl.edu	37	15	64506165	64506165	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	64506165	64506165	T	-	DEL	CSNK1G1	ENST00000303052	human	ensembl	74_37	-1	known	frame_shift_del	c.603	p.K201fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Casein_kinase-1_gamma_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK1G1	HGNC	ENSG00000169118				258	0	0	241	69	22.2581
ZNF609	0	genome.wustl.edu	37	15	64967247	64967247	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	64967247	64967247	A	-	DEL	ZNF609	ENST00000326648	human	ensembl	74_37	+1	known	frame_shift_del	c.2194	p.K734fs	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357				313	0	0	300	55	15.493
STRA6	0	genome.wustl.edu	37	15	74494643	74494643	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	74494643	74494643	A	-	DEL	STRA6	ENST00000573456	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	STRA6	HGNC	ENSG00000137868				29	0	0	30	4	11.7647
BNC1	0	genome.wustl.edu	37	15	83932566	83932566	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	83932566	83932566	A	-	DEL	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	frame_shift_del	c.1437	p.N481fs	0.977	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594				47	0	0	74	10	11.9048
AKAP13	0	genome.wustl.edu	37	15	86278855	86278855	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	86278855	86278855	A	-	DEL	AKAP13	ENST00000361243	human	ensembl	74_37	+1	known	frame_shift_del	c.7518	p.K2508fs	0.998	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	AKAP13	HGNC	ENSG00000170776				112	0	0	127	20	13.6054
BLM	0	genome.wustl.edu	37	15	91304139	91304139	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	15	91304139	91304139	A	-	DEL	BLM	ENST00000355112	human	ensembl	74_37	+1	known	frame_shift_del	c.1536	p.N515fs	0.003	NULL	pfam_RQC_domain,pfam_BDHCT,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_HRDC-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	BLM	HGNC	ENSG00000197299				101	0	0	124	35	22.0126
TVP23A	0	genome.wustl.edu	37	16	10867203	10867203	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	10867203	10867203	A	-	DEL	TVP23A	ENST00000299866	human	ensembl	74_37	-1	known	frame_shift_del	c.420	p.F140fs	1.000	pfam_DUF846_euk	pfam_DUF846_euk	-	no_errors	TVP23A	HGNC	ENSG00000166676				106	0	0	92	25	21.3675
MKL2	0	genome.wustl.edu	37	16	14340930	14340931	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	14340930	14340931	-	A	INS	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	frame_shift_ins	c.1780_1781	p.R596fs	1.000:1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260				68	0	0	93	17	15.4545
ABCC6	0	genome.wustl.edu	37	16	16251627	16251628	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	16251627	16251628	-	G	INS	ABCC6	ENST00000205557	human	ensembl	74_37	-1	known	frame_shift_ins	c.3775_3774	p.W1258fs	1.000:0.988	superfamily_P-loop_NTPase,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC6	HGNC	ENSG00000091262				80	0	0	91	13	12.5
MIR1225	0	genome.wustl.edu	37	16	2140262	2140263	+	RNA	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	2140262	2140263	-	C	INS	MIR1225	ENST00000408729	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.791:0.789	-	-	-	no_errors	MIR1225	HGNC	ENSG00000221656				156	0	0	161	37	18.6869
ATP2A1	0	genome.wustl.edu	37	16	28913639	28913640	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	28913639	28913640	-	C	INS	ATP2A1	ENST00000357084	human	ensembl	74_37	+1	known	frame_shift_ins	c.2456_2457	p.R822fs	0.996:0.957	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A1	HGNC	ENSG00000196296				220	1	0.452489	254	24	8.63309
KCTD13	0	genome.wustl.edu	37	16	29923364	29923364	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	29923364	29923364	T	-	DEL	KCTD13	ENST00000308768	human	ensembl	74_37	-1	known	frame_shift_del	c.421	p.R141fs	1.000	superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	KCTD13	HGNC	ENSG00000174943				16	0	0	20	2	9.09091
ZNF771	0	genome.wustl.edu	37	16	30419402	30419404	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	30419402	30419404	GAG	-	DEL	ZNF771	ENST00000319296	human	ensembl	74_37	+1	known	in_frame_del	c.28_30	p.E13in_frame_del	1.000:1.000:1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF771	HGNC	ENSG00000179965				27	0	0	45	8	15.0943
PRSS36	0	genome.wustl.edu	37	16	31151860	31151860	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	31151860	31151860	G	-	DEL	PRSS36	ENST00000268281	human	ensembl	74_37	-1	known	frame_shift_del	c.2120	p.P707fs	0.006	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS36	HGNC	ENSG00000178226				47	0	0	67	11	14.1026
BBS2	0	genome.wustl.edu	37	16	56532532	56532532	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	56532532	56532532	T	-	DEL	BBS2	ENST00000566410	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.200	-	-	-	no_errors	BBS2	HGNC	ENSG00000125124				40	0	0	59	11	15.7143
HERPUD1	0	genome.wustl.edu	37	16	56977383	56977383	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	56977383	56977383	A	-	DEL	HERPUD1	ENST00000570273	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.511	-	-	-	no_errors	HERPUD1	HGNC	ENSG00000051108				19	0	0	14	3	17.6471
CNOT1	0	genome.wustl.edu	37	16	58589340	58589340	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	58589340	58589340	A	-	DEL	CNOT1	ENST00000317147	human	ensembl	74_37	-1	known	frame_shift_del	c.2706	p.Q904fs	0.995	NULL	pfam_CCR4-Not_Not1_C,superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107				178	0	0	267	44	14.1479
COG8	0	genome.wustl.edu	37	16	69364973	69364974	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	69364973	69364974	-	T	INS	COG8	ENST00000306875	human	ensembl	74_37	-1	known	frame_shift_ins	c.1608_1607	p.Y537fs	1.000:1.000	pirsf_COG8_Metazoal_Plant	pfam_COG8,superfamily_Cullin_repeat-like_dom,pirsf_COG8_Metazoal_Plant	-	no_errors	COG8	HGNC	ENSG00000213380				32	0	0	27	7	20.5882
AP1G1	0	genome.wustl.edu	37	16	71803440	71803440	+	Splice_Site	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	71803440	71803440	A	-	DEL	AP1G1	ENST00000423132	human	ensembl	74_37	-1	known	splice_site_del	c.643-1	e6-1	0.996	-	-	-	no_errors	AP1G1	HGNC	ENSG00000166747				16	0	0	31	12	27.907
ZFHX3	0	genome.wustl.edu	37	16	72991757	72991758	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	72991757	72991758	-	CC	INS	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	frame_shift_ins	c.2288_2287	p.E763fs	1.000:1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				82	0	0	81	12	12.9032
ZC3H18	0	genome.wustl.edu	37	16	88691140	88691141	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	16	88691140	88691141	-	C	INS	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	frame_shift_ins	c.2029_2030	p.R680fs	0.978:0.568	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545				43	0	0	54	5	8.47458
SLC47A1	0	genome.wustl.edu	37	17	19458975	19458976	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	19458975	19458976	-	A	INS	SLC47A1	ENST00000395585	human	ensembl	74_37	+1	known	frame_shift_ins	c.711_712	p.L239fs	0.434:0.456	tigrfam_MATE	pfam_MATE,tigrfam_MATE	-	no_errors	SLC47A1	HGNC	ENSG00000142494				153	0	0	167	33	16.5
ALDH3A1	0	genome.wustl.edu	37	17	19641649	19641649	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	19641649	19641649	G	-	DEL	ALDH3A1	ENST00000225740	human	ensembl	74_37	-1	known	frame_shift_del	c.1334	p.P445fs	0.889	superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	-	no_errors	ALDH3A1	HGNC	ENSG00000108602				156	0	0	141	37	20.7865
MNT	0	genome.wustl.edu	37	17	2298413	2298413	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	2298413	2298413	G	-	DEL	MNT	ENST00000174618	human	ensembl	74_37	-1	known	frame_shift_del	c.409	p.L137fs	0.005	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MNT	HGNC	ENSG00000070444				8	0	0	6	3	33.3333
PAFAH1B1	0	genome.wustl.edu	37	17	2579802	2579802	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	2579802	2579802	A	-	DEL	PAFAH1B1	ENST00000397195	human	ensembl	74_37	+1	known	frame_shift_del	c.904	p.S304fs	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Dynein_regulator_LIS1,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pirsf_Dynein_regulator_LIS1,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PAFAH1B1	HGNC	ENSG00000007168				131	0	0	127	32	20.1258
KSR1	0	genome.wustl.edu	37	17	25910015	25910016	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	25910015	25910016	-	C	INS	KSR1	ENST00000319524	human	ensembl	74_37	+1	known	frame_shift_ins	c.864_865	p.P291fs	0.261:0.999	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	KSR1	HGNC	ENSG00000141068				17	0	0	21	3	12.5
KIAA0100	0	genome.wustl.edu	37	17	26961600	26961600	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	26961600	26961600	G	-	DEL	KIAA0100	ENST00000528896	human	ensembl	74_37	-1	known	frame_shift_del	c.3005	p.P1002fs	0.547	NULL	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202				197	0	0	171	59	25.6522
NSRP1	0	genome.wustl.edu	37	17	28505167	28505167	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	28505167	28505167	A	-	DEL	NSRP1	ENST00000247026	human	ensembl	74_37	+1	known	frame_shift_del	c.250	p.K86fs	1.000	pfam_DUF2040	pfam_DUF2040	-	no_errors	NSRP1	HGNC	ENSG00000126653				101	0	0	126	34	21.25
ENSG00000266535	0	genome.wustl.edu	37	17	31439098	31439101	+	RNA	DEL	AGAG	AGAG	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AGAG	AGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	31439098	31439101	AGAG	-	DEL	ENSG00000266535	ENST00000584688	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.563:0.970:0.975:0.999	-	-	-	no_errors	RP11-40A13.1	Clone_based_vega_gene	ENSG00000266535				24	0	0	31	7	18.4211
RARA	0	genome.wustl.edu	37	17	38487554	38487554	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	38487554	38487554	C	-	DEL	RARA	ENST00000254066	human	ensembl	74_37	+1	known	frame_shift_del	c.84	p.P30fs	1.000	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARA	HGNC	ENSG00000131759				94	0	0	104	15	12.605
TOP2A	0	genome.wustl.edu	37	17	38548531	38548531	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	38548531	38548531	T	-	DEL	TOP2A	ENST00000423485	human	ensembl	74_37	-1	known	frame_shift_del	c.4027	p.T1343fs	0.000	NULL	pfam_Topo_IIA_A/C,pfam_Topo_IIA_bsu_dom2,pfam_DTHCT,pfam_HATPase_ATP-bd,superfamily_Topo_IIA_like_dom,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_Topo_IIA,smart_Topo_IIA_A/C,prints_TopoII_euk,prints_Topo_IIA,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	TOP2A	HGNC	ENSG00000131747				22	0	0	23	6	20.6897
HAP1	0	genome.wustl.edu	37	17	39888591	39888592	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	39888591	39888592	CT	-	DEL	HAP1	ENST00000310778	human	ensembl	74_37	-1	known	frame_shift_del	c.605_604	p.R202fs	1.000:0.998	pfam_HAP1_N	pfam_HAP1_N	-	no_errors	HAP1	HGNC	ENSG00000173805				121	0	0	103	12	10.4348
AOC3	0	genome.wustl.edu	37	17	41004674	41004674	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	41004674	41004674	C	-	DEL	AOC3	ENST00000308423	human	ensembl	74_37	+1	known	frame_shift_del	c.1314	p.L440fs	0.019	pfam_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_C,prints_Cu_amine_oxidase	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC3	HGNC	ENSG00000131471				132	0	0	121	32	20.915
C17orf104	0	genome.wustl.edu	37	17	42745017	42745017	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	42745017	42745017	A	-	DEL	C17orf104	ENST00000409122	human	ensembl	74_37	+1	known	frame_shift_del	c.1738	p.I582fs	1.000	NULL	NULL	-	no_errors	C17orf104	HGNC	ENSG00000180336				23	0	0	29	11	27.5
ADAM11	0	genome.wustl.edu	37	17	42837126	42837126	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	42837126	42837126	G	-	DEL	ADAM11	ENST00000200557	human	ensembl	74_37	+1	known	frame_shift_del	c.98	p.G35fs	0.983	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,prints_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM11	HGNC	ENSG00000073670				157	0	0	125	25	16.6667
ITGB3	0	genome.wustl.edu	37	17	45369918	45369918	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	45369918	45369918	G	-	DEL	ITGB3	ENST00000559488	human	ensembl	74_37	+1	known	frame_shift_del	c.1674	p.E560fs	0.997	pirsf_Integrin_bsu,pfam_EGF_extracell	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB3	HGNC	ENSG00000259207				187	0	0	191	35	15.4867
XYLT2	0	genome.wustl.edu	37	17	48433967	48433967	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	48433967	48433967	C	-	DEL	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	frame_shift_del	c.1578	p.G529fs	1.000	pfam_XylT	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532				101	0	0	124	12	8.82353
NLRP1	0	genome.wustl.edu	37	17	5462052	5462052	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	5462052	5462052	T	-	DEL	NLRP1	ENST00000572272	human	ensembl	74_37	-1	known	frame_shift_del	c.1964	p.K655fs	0.000	NULL	pfam_CARD,pfam_DAPIN,pfam_Leu-rich_rpt,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD,pfscan_DAPIN,prints_Disease_R	-	no_errors	NLRP1	HGNC	ENSG00000091592				194	0	0	211	38	15.261
RNF43	0	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	56435161	56435161	C	-	DEL	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	frame_shift_del	c.1976	p.G659fs	0.900	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375				204	1	0.487805	244	74	23.2704
RPS6KB1	0	genome.wustl.edu	37	17	57970683	57970683	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	57970683	57970683	G	-	DEL	RPS6KB1	ENST00000225577	human	ensembl	74_37	+1	known	frame_shift_del	c.138	p.G48fs	1.000	pirsf_Ribosomal_S6_kinase	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase,pfscan_Prot_kinase_dom	-	no_errors	RPS6KB1	HGNC	ENSG00000108443				14	0	0	13	2	13.3333
GAA	0	genome.wustl.edu	37	17	78090814	78090814	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	78090814	78090814	G	-	DEL	GAA	ENST00000302262	human	ensembl	74_37	+1	known	frame_shift_del	c.2237	p.E748fs	1.000	pfam_Glyco_hydro_31	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	GAA	HGNC	ENSG00000171298				116	0	0	126	20	13.6986
RCVRN	0	genome.wustl.edu	37	17	9801335	9801336	+	RNA	INS	-	-	TG			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	17	9801335	9801336	-	TG	INS	RCVRN	ENST00000570909	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RCVRN	HGNC	ENSG00000109047				130	0	0	114	29	20.2797
ANKRD20A5P	0	genome.wustl.edu	37	18	14225639	14225639	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	14225639	14225639	A	-	DEL	ANKRD20A5P	ENST00000577614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.184	-	-	-	no_errors	ANKRD20A5P	HGNC	ENSG00000186481				25	0	0	33	27	45
TRAPPC8	0	genome.wustl.edu	37	18	29453418	29453418	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	29453418	29453418	A	-	DEL	TRAPPC8	ENST00000283351	human	ensembl	74_37	-1	known	frame_shift_del	c.2037	p.F679fs	1.000	NULL	NULL	-	no_errors	TRAPPC8	HGNC	ENSG00000153339				51	0	0	44	9	16.9811
ENSG00000252258	0	genome.wustl.edu	37	18	3025533	3025533	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	3025533	3025533	A	-	DEL	ENSG00000252258	ENST00000516449	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORA70	RFAM	ENSG00000252258				25	0	0	42	6	12.5
ELP2	0	genome.wustl.edu	37	18	33736541	33736541	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	33736541	33736541	T	-	DEL	ELP2	ENST00000358232	human	ensembl	74_37	+1	known	frame_shift_del	c.1388	p.S465fs	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ELP2	HGNC	ENSG00000134759				100	0	0	181	35	16.2037
FHOD3	0	genome.wustl.edu	37	18	34205516	34205516	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	34205516	34205516	C	-	DEL	FHOD3	ENST00000257209	human	ensembl	74_37	+1	known	frame_shift_del	c.1000	p.S336fs	0.999	superfamily_ARM-type_fold	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD3	HGNC	ENSG00000134775				78	0	0	95	17	15.1786
DYM	0	genome.wustl.edu	37	18	46860144	46860146	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	46860144	46860146	CTT	-	DEL	DYM	ENST00000269445	human	ensembl	74_37	-1	known	in_frame_del	c.574_572	p.E191in_frame_del	0.998:0.955:1.000	pfam_Dymeclin	pfam_Dymeclin,superfamily_ARM-type_fold	-	no_errors	DYM	HGNC	ENSG00000141627				119	0	0	114	34	22.973
MBD1	0	genome.wustl.edu	37	18	47803053	47803053	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	47803053	47803053	T	-	DEL	MBD1	ENST00000424334	human	ensembl	74_37	-1	known	frame_shift_del	c.532	p.T178fs	0.994	NULL	pfam_Znf_CXXC,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_CXXC	-	no_errors	MBD1	HGNC	ENSG00000141644				97	0	0	64	27	29.6703
RPL6P27	0	genome.wustl.edu	37	18	6462616	6462617	+	RNA	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	6462616	6462617	-	T	INS	RPL6P27	ENST00000583065	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:0.984	-	-	-	no_errors	RPL6P27	HGNC	ENSG00000235552				51	0	0	87	7	7.44681
RTTN	0	genome.wustl.edu	37	18	67863751	67863751	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	67863751	67863751	A	-	DEL	RTTN	ENST00000255674	human	ensembl	74_37	-1	known	frame_shift_del	c.827	p.F276fs	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225				85	0	0	76	19	20
SOCS6	0	genome.wustl.edu	37	18	67992095	67992096	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	67992095	67992096	-	A	INS	SOCS6	ENST00000397942	human	ensembl	74_37	+1	known	frame_shift_ins	c.191_192	p.N66fs	0.998:0.000	NULL	pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS6	HGNC	ENSG00000170677				136	0	0	123	36	22.6415
ZNF516	0	genome.wustl.edu	37	18	74091541	74091541	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	74091541	74091541	C	-	DEL	ZNF516	ENST00000443185	human	ensembl	74_37	-1	known	frame_shift_del	c.2529	p.M844fs	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF516	HGNC	ENSG00000101493				207	0	0	222	30	11.9048
PPP4R1	0	genome.wustl.edu	37	18	9593862	9593864	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	18	9593862	9593864	CCA	-	DEL	PPP4R1	ENST00000400556	human	ensembl	74_37	-1	known	in_frame_del	c.199_197	p.V66in_frame_del	1.000:1.000:1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP4R1	HGNC	ENSG00000154845				50	0	0	79	13	14.1304
ICAM4	0	genome.wustl.edu	37	19	10397719	10397719	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	10397719	10397719	T	-	DEL	ICAM4	ENST00000340992	human	ensembl	74_37	+1	known	frame_shift_del	c.31	p.L13fs	0.004	NULL	pfam_ICAM_N	-	no_errors	ICAM4	HGNC	ENSG00000105371				19	0	0	21	6	22.2222
DNM2	0	genome.wustl.edu	37	19	10870400	10870401	+	RNA	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	10870400	10870401	-	C	INS	DNM2	ENST00000588976	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.061:0.028	-	-	-	no_errors	DNM2	HGNC	ENSG00000079805				296	0	0	268	117	30.3896
LPPR2	0	genome.wustl.edu	37	19	11470601	11470601	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	11470601	11470601	C	-	DEL	LPPR2	ENST00000591608	human	ensembl	74_37	+1	known	frame_shift_del	c.285	p.P97fs	0.998	superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	DKFZP761J1410	Uniprot_gn	ENSG00000105520				49	0	0	46	9	16.3636
ELAVL3	0	genome.wustl.edu	37	19	11577605	11577605	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	11577605	11577605	C	-	DEL	ELAVL3	ENST00000359227	human	ensembl	74_37	-1	known	frame_shift_del	c.47	p.G16fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL3	HGNC	ENSG00000196361				26	0	0	40	8	16.6667
ZNF44	0	genome.wustl.edu	37	19	12384448	12384448	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	12384448	12384448	A	-	DEL	ZNF44	ENST00000393337	human	ensembl	74_37	-1	known	frame_shift_del	c.766	p.W256fs	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF44	HGNC	ENSG00000197857				182	0	0	153	91	37.2951
OR7C2	0	genome.wustl.edu	37	19	15052604	15052604	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	15052604	15052604	T	-	DEL	OR7C2	ENST00000248072	human	ensembl	74_37	+1	known	frame_shift_del	c.304	p.F104fs	0.012	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7C2	HGNC	ENSG00000127529				74	0	0	86	23	21.1009
CHERP	0	genome.wustl.edu	37	19	16641463	16641463	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	16641463	16641463	T	-	DEL	CHERP	ENST00000546361	human	ensembl	74_37	-1	known	frame_shift_del	c.809	p.N270fs	1.000	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872				246	0	0	285	16	5.31561
MYO9B	0	genome.wustl.edu	37	19	17322569	17322569	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	17322569	17322569	G	-	DEL	MYO9B	ENST00000594824	human	ensembl	74_37	+1	known	frame_shift_del	c.6044	p.A2017fs	0.998	NULL	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9B	HGNC	ENSG00000099331				57	0	0	72	24	25
ZNF93	0	genome.wustl.edu	37	19	20044270	20044270	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	20044270	20044270	A	-	DEL	ZNF93	ENST00000343769	human	ensembl	74_37	+1	known	frame_shift_del	c.506	p.K171fs	0.897	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF93	HGNC	ENSG00000184635				57	0	0	45	28	38.3562
C19orf12	0	genome.wustl.edu	37	19	30193800	30193800	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	30193800	30193800	G	-	DEL	C19orf12	ENST00000392278	human	ensembl	74_37	-1	known	frame_shift_del	c.278	p.P93fs	0.800	NULL	NULL	-	no_errors	C19orf12	HGNC	ENSG00000131943				162	0	0	179	17	8.67347
KMT2B	0	genome.wustl.edu	37	19	36210893	36210893	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	36210893	36210893	C	-	DEL	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_del	c.644	p.R217fs	0.995	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				36	0	0	35	4	10.2564
KMT2B	0	genome.wustl.edu	37	19	36211899	36211899	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	36211899	36211899	C	-	DEL	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_del	c.1650	p.K553fs	0.252	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				20	0	0	19	7	26.9231
TYROBP	0	genome.wustl.edu	37	19	36399123	36399123	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	36399123	36399123	C	-	DEL	TYROBP	ENST00000262629	human	ensembl	74_37	-1	known	frame_shift_del	c.8	p.G3fs	0.006	NULL	NULL	-	no_errors	TYROBP	HGNC	ENSG00000011600				50	0	0	76	11	12.6437
SAMD4B	0	genome.wustl.edu	37	19	39860622	39860622	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	39860622	39860622	G	-	DEL	SAMD4B	ENST00000314471	human	ensembl	74_37	+1	known	frame_shift_del	c.524	p.G177fs	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	-	no_errors	SAMD4B	HGNC	ENSG00000179134				36	0	0	26	5	16.129
PLEKHG2	0	genome.wustl.edu	37	19	39905656	39905656	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	39905656	39905656	C	-	DEL	PLEKHG2	ENST00000409794	human	ensembl	74_37	+1	known	frame_shift_del	c.134	p.R47fs	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG2	HGNC	ENSG00000090924				26	0	0	21	5	19.2308
CD79A	0	genome.wustl.edu	37	19	42383610	42383610	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	42383610	42383610	C	-	DEL	CD79A	ENST00000221972	human	ensembl	74_37	+1	known	frame_shift_del	c.385	p.R131fs	0.007	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Phos_immunorcpt_sig_ITAM,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM,pfscan_Ig-like_dom	-	no_errors	CD79A	HGNC	ENSG00000105369				16	0	0	26	5	16.129
DEDD2	0	genome.wustl.edu	37	19	42713983	42713983	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	42713983	42713983	G	-	DEL	DEDD2	ENST00000595337	human	ensembl	74_37	-1	known	frame_shift_del	c.458	p.P153fs	0.853	NULL	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	-	no_errors	DEDD2	HGNC	ENSG00000160570				58	0	0	87	8	8.42105
ERF	0	genome.wustl.edu	37	19	42753368	42753368	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	42753368	42753368	C	-	DEL	ERF	ENST00000222329	human	ensembl	74_37	-1	known	frame_shift_del	c.896	p.G299fs	0.941	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ERF	HGNC	ENSG00000105722				27	0	0	36	4	10
ZNF283	0	genome.wustl.edu	37	19	44351117	44351117	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	44351117	44351117	A	-	DEL	ZNF283	ENST00000324461	human	ensembl	74_37	+1	known	frame_shift_del	c.364	p.I124fs	0.039	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF283	HGNC	ENSG00000167637				9	0	0	16	2	11.1111
ZNF233	0	genome.wustl.edu	37	19	44777229	44777229	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	44777229	44777229	C	-	DEL	ZNF233	ENST00000391958	human	ensembl	74_37	+1	known	frame_shift_del	c.416	p.C141fs	0.150	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF233	HGNC	ENSG00000159915				131	0	0	153	37	19.4737
TEAD2	0	genome.wustl.edu	37	19	49850473	49850473	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	49850473	49850473	G	-	DEL	TEAD2	ENST00000311227	human	ensembl	74_37	-1	known	frame_shift_del	c.883	p.H295fs	0.961	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD2	HGNC	ENSG00000074219				409	3	0.728155	383	70	15.4525
SHANK1	0	genome.wustl.edu	37	19	51220109	51220109	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	51220109	51220109	C	-	DEL	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	frame_shift_del	c.68	p.G23fs	0.997	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681				18	0	0	18	6	25
KIR2DL4	0	genome.wustl.edu	37	19	55324675	55324675	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	55324675	55324675	A	-	DEL	KIR2DL4	ENST00000396284	human	ensembl	74_37	+1	known	frame_shift_del	c.796	p.V269fs	0.003	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL4	HGNC	ENSG00000189013				25	0	0	23	22	48.8889
ZNF580	0	genome.wustl.edu	37	19	56153990	56153992	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	56153990	56153992	CTT	-	DEL	ZNF580	ENST00000325333	human	ensembl	74_37	+1	known	in_frame_del	c.116_118	p.S41in_frame_del	0.001:0.000:0.002	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF580	HGNC	ENSG00000213015				10	0	0	9	4	30.7692
FGF22	0	genome.wustl.edu	37	19	643528	643528	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	643528	643528	G	-	DEL	FGF22	ENST00000215530	human	ensembl	74_37	+1	known	frame_shift_del	c.437	p.150fs	0.001	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF22	HGNC	ENSG00000070388				18	0	0	32	5	13.5135
CAMSAP3	0	genome.wustl.edu	37	19	7676026	7676026	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	19	7676026	7676026	C	-	DEL	CAMSAP3	ENST00000446248	human	ensembl	74_37	+1	known	frame_shift_del	c.1176	p.Q394fs	0.714	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826				163	0	0	154	15	8.87574
SEPT10	0	genome.wustl.edu	37	2	110301828	110301828	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	110301828	110301828	T	-	DEL	SEPT10	ENST00000356688	human	ensembl	74_37	-1	putative	frame_shift_del	c.1506	p.K502fs	0.004	NULL	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase	-	no_errors	SEPT10	HGNC	ENSG00000186522				45	0	0	74	15	16.8539
NPHP1	0	genome.wustl.edu	37	2	110926098	110926098	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	110926098	110926098	T	-	DEL	NPHP1	ENST00000316534	human	ensembl	74_37	-1	known	frame_shift_del	c.555	p.K185fs	0.398	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NPHP1	HGNC	ENSG00000144061				112	0	0	215	23	9.66387
SLC35F5	0	genome.wustl.edu	37	2	114500277	114500278	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	114500277	114500278	AA	-	DEL	SLC35F5	ENST00000245680	human	ensembl	74_37	-1	known	frame_shift_del	c.742_741	p.F247fs	1.000:1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35F5	HGNC	ENSG00000115084				138	0	0	155	32	17.1123
R3HDM1	0	genome.wustl.edu	37	2	136409442	136409442	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	136409442	136409442	C	-	DEL	R3HDM1	ENST00000264160	human	ensembl	74_37	+1	known	frame_shift_del	c.1763	p.P589fs	1.000	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	R3HDM1	HGNC	ENSG00000048991				121	0	0	138	22	13.75
CXCR4	0	genome.wustl.edu	37	2	136872414	136872415	+	RNA	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	136872414	136872415	-	A	INS	CXCR4	ENST00000466288	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CXCR4	HGNC	ENSG00000121966				140	1	0.70922	132	47	26.257
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				53	0	0	167	100	37.4532
BAZ2B	0	genome.wustl.edu	37	2	160295136	160295137	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	160295136	160295137	-	T	INS	BAZ2B	ENST00000392783	human	ensembl	74_37	-1	known	frame_shift_ins	c.971_970	p.R324fs	1.000:1.000	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2B	HGNC	ENSG00000123636				178	0	0	234	36	13.3333
PXDN	0	genome.wustl.edu	37	2	1652984	1652984	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	1652984	1652984	G	-	DEL	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	frame_shift_del	c.2568	p.C857fs	0.996	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508				19	0	0	35	5	12.5
COBLL1	0	genome.wustl.edu	37	2	165551296	165551296	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	165551296	165551296	A	-	DEL	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	frame_shift_del	c.2921	p.L974fs	0.972	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438				23	0	0	77	21	21.4286
SCN1A	0	genome.wustl.edu	37	2	166852549	166852550	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	166852549	166852550	-	T	INS	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	frame_shift_ins	c.4555_4554	p.P1518fs	1.000:1.000	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285				39	0	0	110	26	19.1176
HOXD12	0	genome.wustl.edu	37	2	176965259	176965259	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	176965259	176965259	G	-	DEL	HOXD12	ENST00000406506	human	ensembl	74_37	+1	known	frame_shift_del	c.584	p.A197fs	1.000	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXD12	HGNC	ENSG00000170178				22	0	0	15	5	25
RAD51AP2	0	genome.wustl.edu	37	2	17698737	17698737	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	17698737	17698737	T	-	DEL	RAD51AP2	ENST00000399080	human	ensembl	74_37	-1	known	frame_shift_del	c.946	p.T316fs	0.003	NULL	NULL	-	no_errors	RAD51AP2	HGNC	ENSG00000214842				76	0	0	81	31	27.6786
HOXD8	0	genome.wustl.edu	37	2	176995416	176995417	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	176995416	176995417	-	C	INS	HOXD8	ENST00000313173	human	ensembl	74_37	+1	known	frame_shift_ins	c.322_323	p.P111fs	1.000:1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	HOXD8	HGNC	ENSG00000175879				82	0	0	101	25	19.8413
TTN-AS1	0	genome.wustl.edu	37	2	179392052	179392052	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	179392052	179392052	A	-	DEL	TTN-AS1	ENST00000587576	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	TTN-AS1	HGNC	ENSG00000237298				26	0	0	44	15	25.4237
TTN	0	genome.wustl.edu	37	2	179597826	179597826	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	179597826	179597826	A	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.12345	p.F4115fs	0.984	pfam_Ig_I-set,superfamily_RNaseH-like_dom,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				17	0	0	71	8	10.1266
DNAH7	0	genome.wustl.edu	37	2	196788374	196788374	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	196788374	196788374	T	-	DEL	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	frame_shift_del	c.3770	p.N1257fs	0.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997				52	0	0	118	7	5.6
GTF3C3	0	genome.wustl.edu	37	2	197649614	197649614	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	197649614	197649614	T	-	DEL	GTF3C3	ENST00000263956	human	ensembl	74_37	-1	known	frame_shift_del	c.1081	p.T361fs	0.044	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GTF3C3	HGNC	ENSG00000119041				19	0	0	59	7	10.6061
INO80D	0	genome.wustl.edu	37	2	206882406	206882406	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	206882406	206882406	T	-	DEL	INO80D	ENST00000403263	human	ensembl	74_37	-1	known	frame_shift_del	c.1540	p.M514fs	1.000	NULL	NULL	-	no_errors	INO80D	HGNC	ENSG00000114933				11	0	0	26	6	18.75
ERBB4	0	genome.wustl.edu	37	2	212248737	212248737	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	212248737	212248737	T	-	DEL	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	frame_shift_del	c.3530	p.N1177fs	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568				79	0	0	208	46	18.1102
BARD1	0	genome.wustl.edu	37	2	215645974	215645975	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	215645974	215645975	-	T	INS	BARD1	ENST00000260947	human	ensembl	74_37	-1	known	frame_shift_ins	c.624_623	p.K209fs	0.996:0.996	NULL	pfam_Ankyrin_rpt,pfam_BRCT_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_BRCT_dom,smart_Ankyrin_rpt,smart_BRCT_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BRCT_dom,pfscan_Znf_RING,prints_Ankyrin_rpt	-	no_errors	BARD1	HGNC	ENSG00000138376				44	0	0	123	22	15.1724
TNS1	0	genome.wustl.edu	37	2	218683469	218683470	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	218683469	218683470	-	C	INS	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	frame_shift_ins	c.3274_3273	p.S1091fs	1.000:1.000	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				77	0	0	88	7	7.36842
CXCR2P1	0	genome.wustl.edu	37	2	218925366	218925366	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	218925366	218925366	A	-	DEL	CXCR2P1	ENST00000439871	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CXCR2P1	HGNC	ENSG00000229754				76	0	0	98	27	21.6
ZNF142	0	genome.wustl.edu	37	2	219508052	219508052	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	219508052	219508052	G	-	DEL	ZNF142	ENST00000411696	human	ensembl	74_37	-1	known	frame_shift_del	c.3187	p.Q1063fs	0.003	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568				71	0	0	67	12	15.1899
ABCB6	0	genome.wustl.edu	37	2	220081103	220081103	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	220081103	220081103	C	-	DEL	ABCB6	ENST00000265316	human	ensembl	74_37	-1	known	frame_shift_del	c.953	p.G318fs	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB6	HGNC	ENSG00000115657				90	0	0	70	11	13.5802
DOCK10	0	genome.wustl.edu	37	2	225729690	225729690	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	225729690	225729690	C	-	DEL	DOCK10	ENST00000258390	human	ensembl	74_37	-1	known	frame_shift_del	c.1372	p.A458fs	0.061	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK10	HGNC	ENSG00000135905				230	0	0	265	63	19.2073
NYAP2	0	genome.wustl.edu	37	2	226447379	226447379	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	226447379	226447379	C	-	DEL	NYAP2	ENST00000272907	human	ensembl	74_37	+1	known	frame_shift_del	c.1246	p.P417fs	0.997	NULL	NULL	-	no_errors	NYAP2	HGNC	ENSG00000144460				16	0	0	10	6	37.5
IRS1	0	genome.wustl.edu	37	2	227661664	227661664	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	227661664	227661664	C	-	DEL	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	frame_shift_del	c.1791	p.H598fs	0.995	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047				60	0	0	58	12	17.1429
TRIP12	0	genome.wustl.edu	37	2	230652221	230652221	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	230652221	230652221	T	-	DEL	TRIP12	ENST00000283943	human	ensembl	74_37	-1	known	frame_shift_del	c.4770	p.K1590fs	1.000	superfamily_HECT	pfam_HECT,superfamily_HECT,superfamily_ARM-type_fold,smart_HECT,pfscan_HECT,pfscan_WWE-dom	-	no_errors	TRIP12	HGNC	ENSG00000153827				130	0	0	198	22	10
COL6A3	0	genome.wustl.edu	37	2	238242176	238242176	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	238242176	238242176	G	-	DEL	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	frame_shift_del	c.9245	p.P3082fs	0.129	superfamily_Fibronectin_type3	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				91	0	0	78	26	25
ENSG00000268412	0	genome.wustl.edu	37	2	26251337	26251337	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	26251337	26251337	C	-	DEL	ENSG00000268412	ENST00000599234	human	ensembl	74_37	-1	novel	frame_shift_del	c.145	p.V49fs	0.124	pfam_UPF0434/Trm112	pfam_UPF0434/Trm112	-	no_errors	AC013449.1	Clone_based_ensembl_gene	ENSG00000268412				36	0	0	36	6	14.2857
XDH	0	genome.wustl.edu	37	2	31572970	31572970	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	31572970	31572970	C	-	DEL	XDH	ENST00000379416	human	ensembl	74_37	-1	known	frame_shift_del	c.2751	p.Q919fs	0.004	pfam_AldOxase/xan_DH_Mopterin-bd,superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125				250	0	0	313	55	14.9457
RMDN2	0	genome.wustl.edu	37	2	38224583	38224584	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	38224583	38224584	AA	-	DEL	RMDN2	ENST00000234195	human	ensembl	74_37	+1	known	frame_shift_del	c.1504_1505	p.K503fs	1.000:0.998	NULL	NULL	-	no_errors	RMDN2	HGNC	ENSG00000115841				112	0	0	113	22	16.2963
RHOQ	0	genome.wustl.edu	37	2	46808174	46808174	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	46808174	46808174	A	-	DEL	RHOQ	ENST00000238738	human	ensembl	74_37	+1	known	frame_shift_del	c.570	p.R193fs	1.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOQ	HGNC	ENSG00000119729				106	0	0	142	26	15.4762
MSH2	0	genome.wustl.edu	37	2	47639588	47639588	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	47639588	47639588	A	-	DEL	MSH2	ENST00000233146	human	ensembl	74_37	+1	known	frame_shift_del	c.681	p.A230fs	0.994	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom,pirsf_DNA_mismatch_repair_MSH2	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_MSH2	-	no_errors	MSH2	HGNC	ENSG00000095002				60	0	0	73	15	17.0455
MTIF2	0	genome.wustl.edu	37	2	55489517	55489517	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	55489517	55489517	T	-	DEL	MTIF2	ENST00000263629	human	ensembl	74_37	-1	known	frame_shift_del	c.266	p.K89fs	0.992	NULL	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,pfam_GTP_binding_domain,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,superfamily_TIF_IF2_dom3,superfamily_Transl_B-barrel,tigrfam_Small_GTP-bd_dom	-	no_errors	MTIF2	HGNC	ENSG00000085760				371	0	0	396	71	15.2034
CCDC88A	0	genome.wustl.edu	37	2	55561924	55561925	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	55561924	55561925	-	T	INS	CCDC88A	ENST00000436346	human	ensembl	74_37	-1	known	frame_shift_ins	c.2033_2032	p.T678fs	0.998:1.000	NULL	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CCDC88A	HGNC	ENSG00000115355				33	0	0	53	16	23.1884
CCDC85A	0	genome.wustl.edu	37	2	56420368	56420368	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	56420368	56420368	G	-	DEL	CCDC85A	ENST00000407595	human	ensembl	74_37	+1	known	frame_shift_del	c.1033	p.S347fs	0.444	NULL	pfam_DUF2216_coiled-coil	-	no_errors	CCDC85A	HGNC	ENSG00000055813				83	0	0	83	17	17
UGP2	0	genome.wustl.edu	37	2	64069278	64069279	+	RNA	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	64069278	64069279	AA	-	DEL	UGP2	ENST00000484056	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.271:0.359	-	-	-	no_errors	UGP2	HGNC	ENSG00000169764				133	0	0	118	59	33.3333
ATP6V1B1	0	genome.wustl.edu	37	2	71191573	71191573	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	71191573	71191573	C	-	DEL	ATP6V1B1	ENST00000234396	human	ensembl	74_37	+1	known	frame_shift_del	c.1149	p.I386fs	0.999	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,superfamily_P-loop_NTPase,tigrfam_ATPase_V1-cplx_bsu	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,pfam_ATPase_F1/V1/A1-cplx_a/bsu_C,pfam_ATPase_F1_a/bsu_N,superfamily_P-loop_NTPase,superfamily_ATPase_F1_a/bsu_N,superfamily_ATPase_F1/V1/A1-cplx_a/bsu_C,tigrfam_ATPase_V1-cplx_bsu	-	no_errors	ATP6V1B1	HGNC	ENSG00000116039				135	0	0	120	34	22.0779
MCEE	0	genome.wustl.edu	37	2	71351664	71351665	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	2	71351664	71351665	-	A	INS	MCEE	ENST00000244217	human	ensembl	74_37	-1	known	frame_shift_ins	c.50_49	p.S17fs	0.104:0.007	NULL	pfam_Glyas_Fos-R_dOase_dom,tigrfam_MeMalonyl-CoA_epimerase	-	no_errors	MCEE	HGNC	ENSG00000124370				107	0	0	137	22	13.8365
DEFB118	0	genome.wustl.edu	37	20	29960672	29960672	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	29960672	29960672	A	-	DEL	DEFB118	ENST00000253381	human	ensembl	74_37	+1	known	frame_shift_del	c.71	p.K26fs	0.000	NULL	NULL	-	no_errors	DEFB118	HGNC	ENSG00000131068				46	0	0	57	21	26.9231
TTI1	0	genome.wustl.edu	37	20	36627613	36627613	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	36627613	36627613	G	-	DEL	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	frame_shift_del	c.2770	p.L924fs	1.000	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407				98	0	0	133	19	12.5
TP53RK	0	genome.wustl.edu	37	20	45315634	45315634	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	45315634	45315634	G	-	DEL	TP53RK	ENST00000372114	human	ensembl	74_37	-1	known	frame_shift_del	c.520	p.L174fs	0.000	pfam_LipoPS_kinase,pfam_Prot_kinase_dom,pfam_RIO-like_kinase,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom,tigrfam_Bud32	pfam_LipoPS_kinase,pfam_Prot_kinase_dom,pfam_RIO-like_kinase,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom,tigrfam_Bud32	-	no_errors	TP53RK	HGNC	ENSG00000172315				169	0	0	172	49	22.1719
DDX27	0	genome.wustl.edu	37	20	47858504	47858505	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	47858504	47858505	AA	-	DEL	DDX27	ENST00000371764	human	ensembl	74_37	+1	known	frame_shift_del	c.2065_2066	p.K691fs	1.000:1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX27	HGNC	ENSG00000124228				141	0	0	150	41	21.466
KCNB1	0	genome.wustl.edu	37	20	47989557	47989557	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	47989557	47989557	C	-	DEL	KCNB1	ENST00000371741	human	ensembl	74_37	-1	known	frame_shift_del	c.2540	p.G847fs	1.000	NULL	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.1,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB1	HGNC	ENSG00000158445				54	0	0	67	13	16.25
KCNB1	0	genome.wustl.edu	37	20	47989891	47989891	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	47989891	47989891	G	-	DEL	KCNB1	ENST00000371741	human	ensembl	74_37	-1	known	frame_shift_del	c.2206	p.R736fs	1.000	prints_K_chnl_volt-dep_Kv2.1	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.1,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB1	HGNC	ENSG00000158445				177	0	0	267	35	11.5894
ZNF831	0	genome.wustl.edu	37	20	57766220	57766220	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	57766220	57766220	C	-	DEL	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	frame_shift_del	c.146	p.T52fs	0.643	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203				69	0	0	74	11	12.9412
SYCP2	0	genome.wustl.edu	37	20	58467047	58467047	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	58467047	58467047	T	-	DEL	SYCP2	ENST00000357552	human	ensembl	74_37	-1	known	frame_shift_del	c.2362	p.M788fs	0.029	NULL	NULL	-	no_errors	SYCP2	HGNC	ENSG00000196074				31	0	0	65	20	23.5294
SYCP2	0	genome.wustl.edu	37	20	58490593	58490593	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	58490593	58490593	T	-	DEL	SYCP2	ENST00000357552	human	ensembl	74_37	-1	known	frame_shift_del	c.526	p.M176fs	1.000	NULL	NULL	-	no_errors	SYCP2	HGNC	ENSG00000196074				62	0	0	107	22	17.0543
CHGB	0	genome.wustl.edu	37	20	5904506	5904507	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	5904506	5904507	-	A	INS	CHGB	ENST00000378961	human	ensembl	74_37	+1	known	frame_shift_ins	c.1716_1717	p.P574fs	1.000:1.000	pfam_Granin	pfam_Granin,prints_Chromogranin_AB	-	no_errors	CHGB	HGNC	ENSG00000089199				131	0	0	109	34	23.7762
TRMT6	0	genome.wustl.edu	37	20	5924808	5924808	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	5924808	5924808	T	-	DEL	TRMT6	ENST00000203001	human	ensembl	74_37	-1	known	frame_shift_del	c.458	p.K153fs	1.000	pfam_EIF3_gamma,pirsf_tRNA_m1A_mtfrase	pfam_EIF3_gamma,pirsf_tRNA_m1A_mtfrase	-	no_errors	TRMT6	HGNC	ENSG00000089195				18	0	0	20	6	23.0769
TAF4	0	genome.wustl.edu	37	20	60575303	60575303	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	20	60575303	60575303	T	-	DEL	TAF4	ENST00000252996	human	ensembl	74_37	-1	known	frame_shift_del	c.2664	p.K888fs	1.000	pfam_TAF4,superfamily_Histone-fold	pfam_TAF4,pfam_TAFH_NHR1,superfamily_Histone-fold,smart_TAFH_NHR1,pfscan_TAFH_NHR1	-	no_errors	TAF4	HGNC	ENSG00000130699				188	0	0	165	44	21.0526
TTC3	0	genome.wustl.edu	37	21	38524243	38524243	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	38524243	38524243	A	-	DEL	TTC3	ENST00000354749	human	ensembl	74_37	+1	known	frame_shift_del	c.2327	p.E779fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like_dom,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670				74	0	0	94	23	19.6581
PDE9A	0	genome.wustl.edu	37	21	44195538	44195540	+	RNA	DEL	AAA	AAA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	44195538	44195540	AAA	-	DEL	PDE9A	ENST00000460989	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	PDE9A	HGNC	ENSG00000160191				23	0	0	36	5	12.1951
LSS	0	genome.wustl.edu	37	21	47614502	47614502	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	47614502	47614502	C	-	DEL	LSS	ENST00000356396	human	ensembl	74_37	-1	known	frame_shift_del	c.1891	p.E631fs	1.000	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	-	no_errors	LSS	HGNC	ENSG00000160285				72	0	0	59	5	7.8125
MCM3AP	0	genome.wustl.edu	37	21	47663397	47663397	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	21	47663397	47663397	G	-	DEL	MCM3AP	ENST00000291688	human	ensembl	74_37	-1	known	frame_shift_del	c.5278	p.R1760fs	0.019	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	MCM3AP	HGNC	ENSG00000160294				223	0	0	226	34	13.0769
TXNRD2	0	genome.wustl.edu	37	22	19882970	19882971	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	19882970	19882971	-	T	INS	TXNRD2	ENST00000535882	human	ensembl	74_37	-1	known	frame_shift_ins	c.906_905	p.E303fs	0.286:0.249	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,tigrfam_Thioredoxin/glutathione_Rdtase	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_nucl-diS_OxRdtase_dimer,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_FAD_bind_dom,pfam_GIDA-rel,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Hg_reductase,tigrfam_Thioredoxin/glutathione_Rdtase	-	no_errors	TXNRD2	HGNC	ENSG00000184470				326	0	0	327	58	15.0649
OSBP2	0	genome.wustl.edu	37	22	31289751	31289752	+	RNA	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	31289751	31289752	-	A	INS	OSBP2	ENST00000496575	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	OSBP2	HGNC	ENSG00000184792				27	0	0	30	2	6.25
TNRC6B	0	genome.wustl.edu	37	22	40676019	40676019	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	40676019	40676019	T	-	DEL	TNRC6B	ENST00000454349	human	ensembl	74_37	+1	known	frame_shift_del	c.3283	p.F1095fs	1.000	superfamily_UBA-like	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354				356	0	0	422	86	16.9291
SLC25A17	0	genome.wustl.edu	37	22	41195058	41195058	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	22	41195058	41195058	A	-	DEL	SLC25A17	ENST00000435456	human	ensembl	74_37	-1	known	frame_shift_del	c.84	p.L30fs	0.972	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A17	HGNC	ENSG00000100372				57	0	0	58	19	24.6753
PVRL3	0	genome.wustl.edu	37	3	110830859	110830860	+	RNA	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	110830859	110830860	-	T	INS	PVRL3	ENST00000478327	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PVRL3	HGNC	ENSG00000177707				20	0	0	57	14	19.7183
ZBTB20	0	genome.wustl.edu	37	3	114058003	114058003	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	114058003	114058003	G	-	DEL	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	frame_shift_del	c.2075	p.P692fs	0.678	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				73	0	0	115	34	22.8188
MAATS1	0	genome.wustl.edu	37	3	119451295	119451295	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	119451295	119451295	A	-	DEL	MAATS1	ENST00000273390	human	ensembl	74_37	+1	known	frame_shift_del	c.1173	p.N393fs	0.516	NULL	superfamily_S-AdoMet_deCO2ase_core	-	no_errors	MAATS1	HGNC	ENSG00000183833				13	0	0	41	11	21.1538
SLC12A8	0	genome.wustl.edu	37	3	124810944	124810944	+	Splice_Site	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	124810944	124810944	C	-	DEL	SLC12A8	ENST00000423114	human	ensembl	74_37	-1	known	splice_site_del	c.1890+1	e11+1	1.000	-	-	-	no_errors	SLC12A8	HGNC	ENSG00000221955				53	0	0	50	20	28.5714
ALDH1L1	0	genome.wustl.edu	37	3	125877315	125877315	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	125877315	125877315	G	-	DEL	ALDH1L1	ENST00000393434	human	ensembl	74_37	-1	known	frame_shift_del	c.295	p.R99fs	0.088	pfam_Formyl_transf_N,superfamily_Formyl_transf_N,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L1	HGNC	ENSG00000144908				52	0	0	38	14	26.9231
ENSG00000273455	0	genome.wustl.edu	37	3	135806703	135806703	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	135806703	135806703	T	-	DEL	ENSG00000273455	ENST00000608883	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-305O4.3	Clone_based_vega_gene	ENSG00000273455				56	0	0	59	22	27.1605
ATR	0	genome.wustl.edu	37	3	142274740	142274740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	142274740	142274740	T	-	DEL	ATR	ENST00000350721	human	ensembl	74_37	-1	known	frame_shift_del	c.2320	p.I774fs	0.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054				128	1	0.775194	183	45	19.7368
PLSCR1	0	genome.wustl.edu	37	3	146234963	146234963	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	146234963	146234963	A	-	DEL	PLSCR1	ENST00000484560	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.163	-	-	-	no_errors	PLSCR1	HGNC	ENSG00000188313				29	0	0	53	12	18.4615
DHX36	0	genome.wustl.edu	37	3	154032860	154032860	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	154032860	154032860	T	-	DEL	DHX36	ENST00000496811	human	ensembl	74_37	-1	known	frame_shift_del	c.578	p.N193fs	0.790	superfamily_P-loop_NTPase	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX36	HGNC	ENSG00000174953				51	0	0	72	14	16.2791
METTL6	0	genome.wustl.edu	37	3	15455535	15455535	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	15455535	15455535	A	-	DEL	METTL6	ENST00000383790	human	ensembl	74_37	-1	known	frame_shift_del	c.666	p.F222fs	0.912	pirsf_MeTrfase	pfam_Methyltransf_12,pfam_Methyltransf_11,pirsf_MeTrfase	-	no_errors	METTL6	HGNC	ENSG00000206562				54	0	0	76	12	13.6364
VEPH1	0	genome.wustl.edu	37	3	157081226	157081227	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	157081226	157081227	-	T	INS	VEPH1	ENST00000362010	human	ensembl	74_37	-1	known	frame_shift_ins	c.1662_1661	p.N554fs	1.000:1.000	NULL	pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	VEPH1	HGNC	ENSG00000197415				247	0	0	381	83	17.8879
GALNT15	0	genome.wustl.edu	37	3	16252680	16252681	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	16252680	16252681	-	A	INS	GALNT15	ENST00000339732	human	ensembl	74_37	+1	known	frame_shift_ins	c.1129_1130	p.N378fs	1.000:1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT15	HGNC	ENSG00000131386				82	0	0	91	16	14.9533
SI	0	genome.wustl.edu	37	3	164781250	164781250	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	164781250	164781250	A	-	DEL	SI	ENST00000264382	human	ensembl	74_37	-1	known	frame_shift_del	c.887	p.L296fs	1.000	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402				46	0	0	92	15	14.0187
SERPINI1	0	genome.wustl.edu	37	3	167507159	167507159	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	167507159	167507159	A	-	DEL	SERPINI1	ENST00000295777	human	ensembl	74_37	+1	known	frame_shift_del	c.243	p.N83fs	1.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINI1	HGNC	ENSG00000163536				64	0	0	164	22	11.828
SEC62	0	genome.wustl.edu	37	3	169700663	169700664	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	169700663	169700664	-	A	INS	SEC62	ENST00000337002	human	ensembl	74_37	+1	known	frame_shift_ins	c.420_421	p.D143fs	0.978:1.000	pfam_Sec62,superfamily_ABC1_TM_dom	pfam_Sec62,superfamily_ABC1_TM_dom	-	no_errors	SEC62	HGNC	ENSG00000008952				23	0	0	47	8	14.5455
UTS2B	0	genome.wustl.edu	37	3	190999910	190999911	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	190999910	190999911	-	A	INS	UTS2B	ENST00000446788	human	ensembl	74_37	-1	known	frame_shift_ins	c.69_68	p.L23fs	0.000:0.005	NULL	NULL	-	no_errors	UTS2B	HGNC	ENSG00000188958				59	0	0	72	17	19.1011
ATP13A5	0	genome.wustl.edu	37	3	192997234	192997235	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	192997234	192997235	-	A	INS	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	frame_shift_ins	c.3236_3235	p.S1079fs	0.994:0.996	tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527				44	0	0	62	14	18.4211
ATP13A3	0	genome.wustl.edu	37	3	194180670	194180670	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	194180670	194180670	T	-	DEL	ATP13A3	ENST00000256031	human	ensembl	74_37	-1	known	frame_shift_del	c.256	p.I86fs	1.000	pfam_ATPase_P-typ_Cation_typ_V,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A3	HGNC	ENSG00000133657				108	0	0	147	35	19.2308
MUC4	0	genome.wustl.edu	37	3	195488395	195488396	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	195488395	195488396	-	G	INS	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	frame_shift_ins	c.14574_14573	p.G4859fs	0.000:0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				218	0	0	208	22	9.56522
ZDHHC19	0	genome.wustl.edu	37	3	195925221	195925221	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	195925221	195925221	G	-	DEL	ZDHHC19	ENST00000296326	human	ensembl	74_37	-1	known	frame_shift_del	c.875	p.P292fs	0.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC19	HGNC	ENSG00000163958				99	0	0	97	23	19.1667
ENSG00000232783	0	genome.wustl.edu	37	3	197838274	197838276	+	RNA	DEL	AAA	AAA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	197838274	197838276	AAA	-	DEL	ENSG00000232783	ENST00000411596	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001:0.001	-	-	-	no_errors	AC073135.3	Clone_based_vega_gene	ENSG00000232783				21	0	0	36	2	5.26316
HMGB1P5	0	genome.wustl.edu	37	3	22423564	22423564	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	22423564	22423564	A	-	DEL	HMGB1P5	ENST00000451497	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HMGB1P5	HGNC	ENSG00000132967				116	0	0	241	44	15.4386
CNTN4	0	genome.wustl.edu	37	3	3067806	3067806	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	3067806	3067806	C	-	DEL	CNTN4	ENST00000397461	human	ensembl	74_37	+1	known	frame_shift_del	c.1507	p.P504fs	0.643	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN4	HGNC	ENSG00000144619				25	0	0	82	20	19.6078
TRIM71	0	genome.wustl.edu	37	3	32932420	32932421	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	32932420	32932421	-	A	INS	TRIM71	ENST00000383763	human	ensembl	74_37	+1	known	frame_shift_ins	c.1724_1725	p.K577fs	1.000:1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM71	HGNC	ENSG00000206557				90	0	0	88	24	21.4286
DCLK3	0	genome.wustl.edu	37	3	36779824	36779824	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	36779824	36779824	G	-	DEL	DCLK3	ENST00000416516	human	ensembl	74_37	-1	known	frame_shift_del	c.327	p.R110fs	0.053	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK3	HGNC	ENSG00000163673				232	0	0	227	31	12.0155
NKTR	0	genome.wustl.edu	37	3	42679036	42679036	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	42679036	42679036	C	-	DEL	NKTR	ENST00000232978	human	ensembl	74_37	+1	known	frame_shift_del	c.1840	p.P616fs	1.000	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	NKTR	HGNC	ENSG00000114857				224	0	0	305	72	19.0981
DHX30	0	genome.wustl.edu	37	3	47859553	47859553	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	47859553	47859553	C	-	DEL	DHX30	ENST00000445061	human	ensembl	74_37	+1	known	frame_shift_del	c.70	p.R25fs	1.000	NULL	pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX30	HGNC	ENSG00000132153				366	0	0	384	65	14.4766
COL7A1	0	genome.wustl.edu	37	3	48621801	48621801	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	48621801	48621801	G	-	DEL	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	frame_shift_del	c.4127	p.P1376fs	0.893	NULL	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270				87	0	0	95	25	20.8333
AMT	0	genome.wustl.edu	37	3	49457336	49457336	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	49457336	49457336	A	-	DEL	AMT	ENST00000480957	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AMT	HGNC	ENSG00000145020				26	0	0	34	7	17.0732
DAG1	0	genome.wustl.edu	37	3	49547840	49547840	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	49547840	49547840	T	-	DEL	DAG1	ENST00000479935	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.793	-	-	-	no_errors	DAG1	HGNC	ENSG00000173402				35	0	0	30	12	28.5714
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				95	0	0	80	23	22.3301
VPRBP	0	genome.wustl.edu	37	3	51457448	51457448	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	51457448	51457448	T	-	DEL	VPRBP	ENST00000335891	human	ensembl	74_37	-1	known	frame_shift_del	c.1629	p.K543fs	1.000	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	VPRBP	HGNC	ENSG00000145041				461	0	0	413	83	16.7339
ITIH1	0	genome.wustl.edu	37	3	52825870	52825871	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	52825870	52825871	-	G	INS	ITIH1	ENST00000273283	human	ensembl	74_37	+1	known	frame_shift_ins	c.2679_2680	p.A894fs	0.999:1.000	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,superfamily_PsdUridine_synth_cat_dom,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH1	HGNC	ENSG00000055957				64	0	0	58	9	13.4328
IL17RB	0	genome.wustl.edu	37	3	53889347	53889347	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	53889347	53889347	A	-	DEL	IL17RB	ENST00000288167	human	ensembl	74_37	+1	known	frame_shift_del	c.508	p.K172fs	0.036	NULL	pfam_SEFIR	-	no_errors	IL17RB	HGNC	ENSG00000056736				20	0	0	23	5	17.8571
EPHA6	0	genome.wustl.edu	37	3	97311563	97311563	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	97311563	97311563	C	-	DEL	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	frame_shift_del	c.2494	p.R834fs	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224				34	0	0	52	11	17.4603
OR5K2	0	genome.wustl.edu	37	3	98217288	98217288	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	3	98217288	98217288	T	-	DEL	OR5K2	ENST00000427338	human	ensembl	74_37	+1	known	frame_shift_del	c.764	p.F257fs	0.026	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5K2	HGNC	ENSG00000231861				42	0	0	102	21	17.0732
TET2	0	genome.wustl.edu	37	4	106155661	106155661	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	106155661	106155661	A	-	DEL	TET2	ENST00000380013	human	ensembl	74_37	+1	known	frame_shift_del	c.562	p.S189fs	0.006	NULL	NULL	-	no_errors	TET2	HGNC	ENSG00000168769				41	0	0	90	22	19.6429
ARSJ	0	genome.wustl.edu	37	4	114823494	114823494	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	114823494	114823494	T	-	DEL	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	frame_shift_del	c.1736	p.K579fs	0.628	NULL	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801				30	0	0	54	11	16.9231
SCLT1	0	genome.wustl.edu	37	4	129869674	129869675	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	129869674	129869675	-	T	INS	SCLT1	ENST00000281142	human	ensembl	74_37	-1	known	frame_shift_ins	c.1270_1269	p.A423fs	1.000:1.000	NULL	NULL	-	no_errors	SCLT1	HGNC	ENSG00000151466				41	0	0	93	23	19.8276
FHDC1	0	genome.wustl.edu	37	4	153896924	153896924	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	153896924	153896924	C	-	DEL	FHDC1	ENST00000260008	human	ensembl	74_37	+1	known	frame_shift_del	c.2481	p.P829fs	0.617	NULL	pfam_FH2_Formin,smart_FH2_Formin	-	no_errors	FHDC1	HGNC	ENSG00000137460				199	0	0	210	55	20.7547
PLRG1	0	genome.wustl.edu	37	4	155470089	155470090	+	Splice_Site	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	155470089	155470090	-	A	INS	PLRG1	ENST00000393905	human	ensembl	74_37	-1	known	splice_site_ins	c.10-3_10-2	e2-2	1.000:0.087	-	-	-	no_errors	PLRG1	HGNC	ENSG00000171566				47	0	0	55	8	12.6984
RAPGEF2	0	genome.wustl.edu	37	4	160253755	160253755	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	160253755	160253755	A	-	DEL	RAPGEF2	ENST00000264431	human	ensembl	74_37	+1	known	frame_shift_del	c.1558	p.S522fs	1.000	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,pfam_PDZ,pfam_cNMP-bd_dom,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF2	HGNC	ENSG00000109756				78	0	0	77	29	27.3585
CLCN3	0	genome.wustl.edu	37	4	170613460	170613460	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	170613460	170613460	A	-	DEL	CLCN3	ENST00000347613	human	ensembl	74_37	+1	known	frame_shift_del	c.925	p.R311fs	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-3	-	no_errors	CLCN3	HGNC	ENSG00000109572				170	0	0	186	41	18.0617
AGA	0	genome.wustl.edu	37	4	178352896	178352896	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	178352896	178352896	T	-	DEL	AGA	ENST00000264595	human	ensembl	74_37	-1	known	frame_shift_del	c.1007	p.N336fs	0.008	NULL	pfam_Peptidase_T2	-	no_errors	AGA	HGNC	ENSG00000038002				59	0	0	66	17	20.4819
FAM193A	0	genome.wustl.edu	37	4	2661593	2661593	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	2661593	2661593	C	-	DEL	FAM193A	ENST00000324666	human	ensembl	74_37	+1	known	frame_shift_del	c.684	p.V231fs	0.995	NULL	NULL	-	no_errors	FAM193A	HGNC	ENSG00000125386				213	0	0	263	23	8.04196
UGDH	0	genome.wustl.edu	37	4	39515753	39515753	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	39515753	39515753	A	-	DEL	UGDH	ENST00000316423	human	ensembl	74_37	-1	known	frame_shift_del	c.214	p.S72fs	1.000	pfam_UDP-Glc/GDP-Man_DH_N,tigrfam_UDP-Glc/GDP-Man	pfam_UDP-Glc/GDP-Man_DH_N,pfam_UDP-Glc/GDP-Man_DH_C,pfam_UDP-Glc/GDP-Man_DH_dimer,superfamily_UDP-Glc/GDP-Man_DH_C,superfamily_6-PGluconate_DH_C-like,tigrfam_UDP-Glc/GDP-Man	-	no_errors	UGDH	HGNC	ENSG00000109814				141	0	0	135	26	16.1491
ATP10D	0	genome.wustl.edu	37	4	47538491	47538491	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	47538491	47538491	T	-	DEL	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	frame_shift_del	c.1053	p.F353fs	0.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246				168	0	0	365	87	19.2478
EPHA5	0	genome.wustl.edu	37	4	66467646	66467646	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	66467646	66467646	T	-	DEL	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	frame_shift_del	c.623	p.K208fs	1.000	pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom,pirsf_Tyr_kinase_ephrin_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242				78	0	0	100	26	20.6349
ABLIM2	0	genome.wustl.edu	37	4	8089996	8089996	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	8089996	8089996	G	-	DEL	ABLIM2	ENST00000447017	human	ensembl	74_37	-1	known	frame_shift_del	c.354	p.D120fs	0.001	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM2	HGNC	ENSG00000163995				43	0	0	50	13	20.6349
SEC31A	0	genome.wustl.edu	37	4	83785565	83785565	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	83785565	83785565	T	-	DEL	SEC31A	ENST00000432794	human	ensembl	74_37	-1	known	frame_shift_del	c.1384	p.I462fs	0.985	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31A	HGNC	ENSG00000138674				92	0	0	70	43	38.0531
TRMT44	0	genome.wustl.edu	37	4	8477713	8477715	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	8477713	8477715	GAA	-	DEL	TRMT44	ENST00000389737	human	ensembl	74_37	+1	known	in_frame_del	c.2259_2261	p.K755in_frame_del	0.788:0.740:0.578	NULL	pfam_tRNA_uracil_MeTrfase	-	no_errors	TRMT44	HGNC	ENSG00000155275				161	0	0	195	27	12.1622
SPARCL1	0	genome.wustl.edu	37	4	88420707	88420707	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	88420707	88420707	A	-	DEL	SPARCL1	ENST00000282470	human	ensembl	74_37	-1	known	frame_shift_del	c.20	p.F7fs	0.627	pirsf_SPARC-like_p1	pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,pfam_Follistatin/Osteonectin_EGF,smart_Fol_N,smart_Kazal_dom,pirsf_SPARC-like_p1,pfscan_EF_hand_dom	-	no_errors	SPARCL1	HGNC	ENSG00000152583				149	0	0	156	34	17.8947
ABCG2	0	genome.wustl.edu	37	4	89028360	89028360	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	4	89028360	89028360	T	-	DEL	ABCG2	ENST00000237612	human	ensembl	74_37	-1	known	frame_shift_del	c.1253	p.N418fs	0.132	pfam_ABC_2_trans	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCG2	HGNC	ENSG00000118777				54	0	0	52	12	18.75
PCDHB10	0	genome.wustl.edu	37	5	140573738	140573738	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	140573738	140573738	C	-	DEL	PCDHB10	ENST00000239446	human	ensembl	74_37	+1	known	frame_shift_del	c.1613	p.A540fs	0.111	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB10	HGNC	ENSG00000120324				182	0	0	231	25	9.76562
ARAP3	0	genome.wustl.edu	37	5	141052704	141052705	+	RNA	DEL	GA	GA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	141052704	141052705	GA	-	DEL	ARAP3	ENST00000524066	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.015:0.013	-	-	-	no_errors	ARAP3	HGNC	ENSG00000120318				67	0	0	65	15	18.75
RBM27	0	genome.wustl.edu	37	5	145647320	145647321	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	145647320	145647321	AA	-	DEL	RBM27	ENST00000265271	human	ensembl	74_37	+1	known	frame_shift_del	c.2440_2441	p.K816fs	1.000:1.000	NULL	pfam_PWI_dom,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009				106	0	0	89	33	27.0492
TCERG1	0	genome.wustl.edu	37	5	145883589	145883589	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	145883589	145883589	T	-	DEL	TCERG1	ENST00000509787	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TCERG1	HGNC	ENSG00000113649				46	0	0	49	13	20.9677
FBXO38	0	genome.wustl.edu	37	5	147806939	147806940	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	147806939	147806940	-	A	INS	FBXO38	ENST00000340253	human	ensembl	74_37	+1	known	frame_shift_ins	c.2082_2083	p.N696fs	1.000:1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO38	HGNC	ENSG00000145868				43	0	0	52	11	17.4603
NDST1	0	genome.wustl.edu	37	5	149918818	149918819	+	Frame_Shift_Ins	INS	-	-	CA			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	149918818	149918819	-	CA	INS	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	frame_shift_ins	c.1466_1467	p.T493fs	1.000:1.000	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614				278	1	0.358423	276	59	17.6119
FAT2	0	genome.wustl.edu	37	5	150923356	150923357	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	150923356	150923357	-	T	INS	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	frame_shift_ins	c.7332_7331	p.H2445fs	1.000:1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570				49	0	0	90	24	21.0526
SH3PXD2B	0	genome.wustl.edu	37	5	171781005	171781007	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	171781005	171781007	CTC	-	DEL	SH3PXD2B	ENST00000311601	human	ensembl	74_37	-1	known	in_frame_del	c.672_670	p.E224in_frame_del	1.000:1.000:1.000	superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,pfam_SH3-like_bac-type,pfam_DUF1058,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2B	HGNC	ENSG00000174705				76	0	0	86	22	20.3704
UNC5A	0	genome.wustl.edu	37	5	176305271	176305271	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	176305271	176305271	G	-	DEL	UNC5A	ENST00000329542	human	ensembl	74_37	+1	known	frame_shift_del	c.1896	p.G634fs	1.000	NULL	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5A	HGNC	ENSG00000113763				52	0	0	88	11	11.1111
CANX	0	genome.wustl.edu	37	5	179149920	179149920	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	179149920	179149920	T	-	DEL	CANX	ENST00000415618	human	ensembl	74_37	+1	known	frame_shift_del	c.1403	p.F470fs	1.000	pfam_Calret/calnex,superfamily_ConA-like_lec_gl_sf,prints_Calret/calnex	pfam_Calret/calnex,superfamily_ConA-like_lec_gl_sf,superfamily_Calreticulin/calnexin_P_dom,prints_Calret/calnex	-	no_errors	CANX	HGNC	ENSG00000127022				164	1	0.606061	146	40	21.5054
CDH10	0	genome.wustl.edu	37	5	24487659	24487659	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	24487659	24487659	A	-	DEL	CDH10	ENST00000502921	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.128	-	-	-	no_errors	CDH10	HGNC	ENSG00000040731				25	0	0	57	13	18.5714
ZFR	0	genome.wustl.edu	37	5	32355834	32355834	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	32355834	32355834	T	-	DEL	ZFR	ENST00000510369	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	ZFR	HGNC	ENSG00000056097				81	0	0	99	28	22.0472
ZFR	0	genome.wustl.edu	37	5	32404161	32404161	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	32404161	32404161	T	-	DEL	ZFR	ENST00000265069	human	ensembl	74_37	-1	known	frame_shift_del	c.1074	p.E359fs	1.000	smart_Znf_U1	pfam_DZF,pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR	HGNC	ENSG00000056097				138	0	0	205	37	15.2893
GPX8	0	genome.wustl.edu	37	5	54460113	54460113	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	54460113	54460113	T	-	DEL	GPX8	ENST00000506123	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPX8	HGNC	ENSG00000164294				21	0	0	28	3	9.67742
PLK2	0	genome.wustl.edu	37	5	57753012	57753012	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	57753012	57753012	A	-	DEL	PLK2	ENST00000274289	human	ensembl	74_37	-1	known	frame_shift_del	c.1004	p.L335fs	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK2	HGNC	ENSG00000145632				60	0	0	82	24	22.6415
SREK1IP1	0	genome.wustl.edu	37	5	64020271	64020272	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	64020271	64020272	-	T	INS	SREK1IP1	ENST00000513458	human	ensembl	74_37	-1	known	frame_shift_ins	c.408_407	p.K137fs	1.000:1.000	NULL	superfamily_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	SREK1IP1	HGNC	ENSG00000153006				50	0	0	53	11	17.1875
SLC30A5	0	genome.wustl.edu	37	5	68398896	68398896	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	68398896	68398896	T	-	DEL	SLC30A5	ENST00000396591	human	ensembl	74_37	+1	known	frame_shift_del	c.214	p.F73fs	0.996	NULL	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A5	HGNC	ENSG00000145740				223	0	0	233	49	17.3759
WDR41	0	genome.wustl.edu	37	5	76728856	76728856	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	76728856	76728856	A	-	DEL	WDR41	ENST00000512033	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.004	-	-	-	no_errors	WDR41	HGNC	ENSG00000164253				29	0	0	33	8	19.5122
MSH3	0	genome.wustl.edu	37	5	79970915	79970915	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	79970915	79970915	A	-	DEL	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	frame_shift_del	c.1141	p.K383fs	0.982	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318				217	0	0	210	99	32.0388
ZDHHC11	0	genome.wustl.edu	37	5	825347	825347	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	825347	825347	G	-	DEL	ZDHHC11	ENST00000283441	human	ensembl	74_37	-1	known	frame_shift_del	c.955	p.L319fs	0.003	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC11	HGNC	ENSG00000188818				150	0	0	157	25	13.7363
ERAP2	0	genome.wustl.edu	37	5	96232084	96232085	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	5	96232084	96232085	-	T	INS	ERAP2	ENST00000437043	human	ensembl	74_37	+1	known	frame_shift_ins	c.1247_1248	p.L418fs	0.000:0.002	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ERAP2	HGNC	ENSG00000164308				21	0	0	68	20	22.7273
AK9	0	genome.wustl.edu	37	6	109814598	109814599	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	109814598	109814599	-	GA	INS	AK9	ENST00000424296	human	ensembl	74_37	-1	known	frame_shift_ins	c.5710_5709	p.R1903fs	0.760:0.106	NULL	pfam_Adenylate_kin,pfam_YHS_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	AK9	HGNC	ENSG00000155085				332	0	0	365	83	18.5268
RSPH4A	0	genome.wustl.edu	37	6	116950769	116950771	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	116950769	116950771	GAA	-	DEL	RSPH4A	ENST00000229554	human	ensembl	74_37	+1	known	in_frame_del	c.1702_1704	p.E571in_frame_del	0.993:0.985:0.878	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH4A	HGNC	ENSG00000111834				106	0	0	125	32	20.3822
RNF217	0	genome.wustl.edu	37	6	125284072	125284072	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	125284072	125284072	C	-	DEL	RNF217	ENST00000521654	human	ensembl	74_37	+1	novel	frame_shift_del	c.382	p.G130fs	0.992	NULL	pfam_Znf_C6HC,smart_Znf_C6HC	-	no_errors	RNF217	HGNC	ENSG00000146373				27	0	0	36	10	21.7391
FOXQ1	0	genome.wustl.edu	37	6	1313402	1313402	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	1313402	1313402	T	-	DEL	FOXQ1	ENST00000296839	human	ensembl	74_37	+1	known	frame_shift_del	c.463	p.F156fs	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXQ1	HGNC	ENSG00000164379				84	0	0	84	17	16.8317
CCDC28A	0	genome.wustl.edu	37	6	139097330	139097330	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	139097330	139097330	A	-	DEL	CCDC28A	ENST00000332797	human	ensembl	74_37	+1	known	frame_shift_del	c.343	p.N117fs	1.000	NULL	NULL	-	no_errors	CCDC28A	HGNC	ENSG00000024862				117	1	0.847458	139	35	20.1149
PHACTR2	0	genome.wustl.edu	37	6	144086413	144086414	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	144086413	144086414	-	A	INS	PHACTR2	ENST00000440869	human	ensembl	74_37	+1	known	frame_shift_ins	c.710_711	p.T240fs	0.746:0.153	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR2	HGNC	ENSG00000112419				146	0	0	187	40	17.6211
MYCT1	0	genome.wustl.edu	37	6	153019117	153019117	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	153019117	153019117	T	-	DEL	MYCT1	ENST00000367245	human	ensembl	74_37	+1	known	frame_shift_del	c.80	p.F29fs	0.997	NULL	NULL	-	no_errors	MYCT1	HGNC	ENSG00000120279				50	0	0	106	9	7.82609
QKI	0	genome.wustl.edu	37	6	163899920	163899920	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	163899920	163899920	A	-	DEL	QKI	ENST00000361752	human	ensembl	74_37	+1	known	frame_shift_del	c.394	p.K134fs	1.000	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	QKI	HGNC	ENSG00000112531				93	0	0	132	32	19.5122
FRMD1	0	genome.wustl.edu	37	6	168461462	168461463	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	168461462	168461463	-	G	INS	FRMD1	ENST00000283309	human	ensembl	74_37	-1	known	frame_shift_ins	c.1321_1320	p.S440fs	0.532:0.005	NULL	pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD1	HGNC	ENSG00000153303				65	0	0	55	11	16.6667
NHLRC1	0	genome.wustl.edu	37	6	18122226	18122226	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	18122226	18122226	A	-	DEL	NHLRC1	ENST00000340650	human	ensembl	74_37	-1	known	frame_shift_del	c.612	p.F204fs	0.001	pfscan_NHL_repeat_subgr	smart_Znf_RING,pfscan_NHL_repeat_subgr,pfscan_Znf_RING	-	no_errors	NHLRC1	HGNC	ENSG00000187566				79	0	0	76	31	28.972
GABBR1	0	genome.wustl.edu	37	6	29599254	29599254	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	29599254	29599254	C	-	DEL	GABBR1	ENST00000377034	human	ensembl	74_37	-1	known	frame_shift_del	c.208	p.E70fs	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Sushi_SCR_CCP,superfamily_Peripla_BP_I,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,pfscan_Sushi_SCR_CCP,pfscan_GPCR_3_C	-	no_errors	GABBR1	HGNC	ENSG00000204681				232	1	0.429185	242	61	20.132
DHX16	0	genome.wustl.edu	37	6	30621048	30621048	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	30621048	30621048	T	-	DEL	DHX16	ENST00000376442	human	ensembl	74_37	-1	known	frame_shift_del	c.3097	p.I1033fs	0.987	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX16	HGNC	ENSG00000204560				157	0	0	127	39	23.494
CCHCR1	0	genome.wustl.edu	37	6	31124699	31124699	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	31124699	31124699	G	-	DEL	CCHCR1	ENST00000396268	human	ensembl	74_37	-1	known	frame_shift_del	c.306	p.S103fs	0.938	NULL	pfam_HCR	-	no_errors	CCHCR1	HGNC	ENSG00000204536				105	0	0	104	21	16.8
HLA-B	0	genome.wustl.edu	37	6	31324917	31324917	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	31324917	31324917	G	-	DEL	HLA-B	ENST00000412585	human	ensembl	74_37	-1	known	frame_shift_del	c.19	p.R7fs	0.000	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-B	HGNC	ENSG00000234745				34	0	0	39	4	9.30233
PBX2	0	genome.wustl.edu	37	6	32157563	32157563	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	32157563	32157563	C	-	DEL	PBX2	ENST00000375050	human	ensembl	74_37	-1	known	frame_shift_del	c.130	p.V44fs	1.000	NULL	pfam_PBX,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	PBX2	HGNC	ENSG00000204304				41	0	0	56	4	6.66667
GPSM3	0	genome.wustl.edu	37	6	32159229	32159230	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	32159229	32159230	-	C	INS	GPSM3	ENST00000375040	human	ensembl	74_37	-1	known	frame_shift_ins	c.397_396	p.Q132fs	0.998:0.959	smart_GoLoco_motif,pfscan_GoLoco_motif	pfam_GoLoco_motif,smart_GoLoco_motif,pfscan_GoLoco_motif	-	no_errors	GPSM3	HGNC	ENSG00000213654				134	0	0	167	32	16.0804
COL11A2	0	genome.wustl.edu	37	6	33154509	33154510	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	33154509	33154510	-	C	INS	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	frame_shift_ins	c.693_692	p.Q232fs	0.001:0.005	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248				211	0	0	196	42	17.6471
PHF1	0	genome.wustl.edu	37	6	33380050	33380050	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	33380050	33380050	C	-	DEL	PHF1	ENST00000374516	human	ensembl	74_37	+1	known	frame_shift_del	c.10	p.R6fs	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF1	HGNC	ENSG00000112511				82	0	0	65	14	17.7215
DDX43	0	genome.wustl.edu	37	6	74110047	74110047	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	74110047	74110047	A	-	DEL	DDX43	ENST00000370336	human	ensembl	74_37	+1	known	frame_shift_del	c.397	p.K134fs	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_KH_dom_type_1,superfamily_P-loop_NTPase,smart_KH_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_KH_dom_type_1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX43	HGNC	ENSG00000080007				136	0	0	111	21	15.9091
COL12A1	0	genome.wustl.edu	37	6	75797396	75797397	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	75797396	75797397	-	G	INS	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	frame_shift_ins	c.9078_9077	p.G3027fs	0.093:1.000	NULL	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				166	1	0.598802	162	33	16.9231
DSP	0	genome.wustl.edu	37	6	7584027	7584027	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	7584027	7584027	A	-	DEL	DSP	ENST00000379802	human	ensembl	74_37	+1	known	frame_shift_del	c.6532	p.K2179fs	1.000	smart_Plectin_repeat	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				103	0	0	123	17	12.1429
TTK	0	genome.wustl.edu	37	6	80751897	80751897	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	80751897	80751897	A	-	DEL	TTK	ENST00000369798	human	ensembl	74_37	+1	known	frame_shift_del	c.2552	p.R854fs	0.102	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTK	HGNC	ENSG00000112742				26	0	0	67	10	12.987
ZNF292	0	genome.wustl.edu	37	6	87969484	87969484	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	87969484	87969484	A	-	DEL	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	frame_shift_del	c.6137	p.S2049fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994				9	0	0	16	7	30.4348
C6orf165	0	genome.wustl.edu	37	6	88144700	88144700	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	88144700	88144700	A	-	DEL	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	frame_shift_del	c.1423	p.N477fs	1.000	pfam_DUF3508	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514				58	0	0	68	23	25.2747
MMS22L	0	genome.wustl.edu	37	6	97620979	97620979	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	6	97620979	97620979	T	-	DEL	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	frame_shift_del	c.2799	p.V934fs	0.937	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263				56	0	0	116	33	22.1477
GIGYF1	0	genome.wustl.edu	37	7	100285170	100285170	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	100285170	100285170	G	-	DEL	GIGYF1	ENST00000275732	human	ensembl	74_37	-1	known	frame_shift_del	c.331	p.L111fs	0.025	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830				54	0	0	58	4	6.45161
AP1S1	0	genome.wustl.edu	37	7	100802405	100802405	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	100802405	100802405	G	-	DEL	AP1S1	ENST00000337619	human	ensembl	74_37	+1	known	frame_shift_del	c.357	p.D122fs	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_AP_complex_ssu	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_AP_complex_ssu	-	no_errors	AP1S1	HGNC	ENSG00000106367				58	0	0	67	11	14.1026
VGF	0	genome.wustl.edu	37	7	100806691	100806693	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	100806691	100806693	CTC	-	DEL	VGF	ENST00000249330	human	ensembl	74_37	-1	known	in_frame_del	c.1434_1432	p.E478in_frame_del	1.000:1.000:1.000	NULL	NULL	-	no_errors	VGF	HGNC	ENSG00000128564				37	0	0	36	7	16.2791
LRRC17	0	genome.wustl.edu	37	7	102584992	102584993	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	102584992	102584993	-	A	INS	LRRC17	ENST00000339431	human	ensembl	74_37	+1	known	frame_shift_ins	c.1264_1265	p.H425fs	1.000:1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC17	HGNC	ENSG00000128606				100	0	0	137	23	14.375
LAMB4	0	genome.wustl.edu	37	7	107703394	107703394	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	107703394	107703394	G	-	DEL	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	frame_shift_del	c.3107	p.P1036fs	0.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128				54	0	0	91	7	7.14286
SVOPL	0	genome.wustl.edu	37	7	138279228	138279229	+	RNA	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	138279228	138279229	AA	-	DEL	SVOPL	ENST00000463557	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SVOPL	HGNC	ENSG00000157703				18	0	0	22	6	21.4286
TMEM139	0	genome.wustl.edu	37	7	142983891	142983891	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	142983891	142983891	T	-	DEL	TMEM139	ENST00000359333	human	ensembl	74_37	+1	known	frame_shift_del	c.620	p.Y209fs	1.000	NULL	NULL	-	no_errors	TMEM139	HGNC	ENSG00000178826				303	0	0	283	52	15.5224
AOC1	0	genome.wustl.edu	37	7	150558259	150558259	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	150558259	150558259	C	-	DEL	AOC1	ENST00000416793	human	ensembl	74_37	+1	known	frame_shift_del	c.2275	p.P760fs	0.001	NULL	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC1	HGNC	ENSG00000002726				73	0	0	90	19	17.4312
CHPF2	0	genome.wustl.edu	37	7	150935383	150935383	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	150935383	150935383	C	-	DEL	CHPF2	ENST00000035307	human	ensembl	74_37	+1	known	frame_shift_del	c.1935	p.S648fs	0.983	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHPF2	HGNC	ENSG00000033100				42	0	0	77	8	9.41176
KMT2C	0	genome.wustl.edu	37	7	151856008	151856009	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	151856008	151856009	-	T	INS	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	frame_shift_ins	c.11610_11609	p.D3871fs	1.000:1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				374	0	0	478	82	14.6429
KMT2C	0	genome.wustl.edu	37	7	151874700	151874701	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	151874700	151874701	-	G	INS	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	frame_shift_ins	c.7838_7837	p.Q2613fs	0.013:0.068	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				182	0	0	253	50	16.5017
NEUROD6	0	genome.wustl.edu	37	7	31378635	31378635	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	31378635	31378635	T	-	DEL	NEUROD6	ENST00000297142	human	ensembl	74_37	-1	known	frame_shift_del	c.248	p.K83fs	1.000	pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD6	HGNC	ENSG00000164600				278	1	0.358423	363	84	18.7919
FBXL18	0	genome.wustl.edu	37	7	5541183	5541183	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	5541183	5541183	G	-	DEL	FBXL18	ENST00000453700	human	ensembl	74_37	-1	known	frame_shift_del	c.717	p.G240fs	0.011	NULL	pfam_F-box_dom,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXL18	HGNC	ENSG00000155034				57	0	0	48	10	17.2414
CYTH3	0	genome.wustl.edu	37	7	6204578	6204578	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	6204578	6204578	T	-	DEL	CYTH3	ENST00000350796	human	ensembl	74_37	-1	known	frame_shift_del	c.1197	p.K399fs	1.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	CYTH3	HGNC	ENSG00000008256				784	0	0	734	135	15.5351
CLDN4	0	genome.wustl.edu	37	7	73246063	73246063	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	73246063	73246063	G	-	DEL	CLDN4	ENST00000340958	human	ensembl	74_37	+1	known	frame_shift_del	c.532	p.L180fs	0.998	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin4	-	no_errors	CLDN4	HGNC	ENSG00000189143				52	0	0	79	13	14.1304
TMEM60	0	genome.wustl.edu	37	7	77423460	77423460	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	77423460	77423460	T	-	DEL	TMEM60	ENST00000257663	human	ensembl	74_37	-1	known	frame_shift_del	c.231	p.A78fs	0.998	NULL	pfam_TM_Fragile-X-F-assoc	-	no_errors	TMEM60	HGNC	ENSG00000135211				221	1	0.45045	226	59	20.7018
PCLO	0	genome.wustl.edu	37	7	82582944	82582944	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	82582944	82582944	T	-	DEL	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	frame_shift_del	c.7325	p.K2442fs	0.984	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				27	0	0	48	12	20
PPP1R9A	0	genome.wustl.edu	37	7	94917981	94917981	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	94917981	94917981	A	-	DEL	PPP1R9A	ENST00000289495	human	ensembl	74_37	+1	known	frame_shift_del	c.3629	p.N1211fs	0.994	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_SAM_2,pfam_SAM_type1,pfam_PDZ,superfamily_PDZ,superfamily_SAM/pointed,superfamily_Smac_DIABLO-like,smart_PDZ,smart_SAM,pfscan_PDZ,pfscan_SAM	-	no_errors	PPP1R9A	HGNC	ENSG00000158528				66	0	0	172	10	5.49451
CNPY4	0	genome.wustl.edu	37	7	99717402	99717402	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	7	99717402	99717402	T	-	DEL	CNPY4	ENST00000262932	human	ensembl	74_37	+1	known	frame_shift_del	c.35	p.L14fs	0.008	NULL	pfam_DUF3456	-	no_errors	CNPY4	HGNC	ENSG00000166997				97	0	0	118	30	20.2703
PTK2	0	genome.wustl.edu	37	8	141754889	141754890	+	RNA	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	141754889	141754890	AA	-	DEL	PTK2	ENST00000518509	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.004	-	-	-	no_errors	PTK2	HGNC	ENSG00000169398				35	0	0	40	8	16.6667
OPLAH	0	genome.wustl.edu	37	8	145109481	145109481	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	145109481	145109481	C	-	DEL	OPLAH	ENST00000426825	human	ensembl	74_37	-1	known	frame_shift_del	c.2669	p.G890fs	0.999	pfam_Hydantoinase_B	pfam_Hydantoinase_B,pfam_Hydantoinase_A,pfam_Hydant_A_N	-	no_errors	OPLAH	HGNC	ENSG00000178814				37	0	0	40	8	16.6667
VPS28	0	genome.wustl.edu	37	8	145652341	145652341	+	RNA	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	145652341	145652341	G	-	DEL	VPS28	ENST00000526734	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	VPS28	HGNC	ENSG00000160948				32	0	0	37	4	9.7561
ADAM28	0	genome.wustl.edu	37	8	24167472	24167473	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	24167472	24167473	-	A	INS	ADAM28	ENST00000265769	human	ensembl	74_37	+1	known	frame_shift_ins	c.216_217	p.N74fs	1.000:1.000	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM28	HGNC	ENSG00000042980				25	0	0	93	29	23.7705
INTS9	0	genome.wustl.edu	37	8	28633400	28633400	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	28633400	28633400	G	-	DEL	INTS9	ENST00000521022	human	ensembl	74_37	-1	known	frame_shift_del	c.1439	p.P480fs	0.734	NULL	pfam_Beta_Casp	-	no_errors	INTS9	HGNC	ENSG00000104299				80	0	0	119	10	7.75194
ESRP1	0	genome.wustl.edu	37	8	95686611	95686611	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	95686611	95686611	A	-	DEL	ESRP1	ENST00000433389	human	ensembl	74_37	+1	known	frame_shift_del	c.1528	p.N512fs	1.000	smart_RRM_dom	superfamily_RNaseH-like_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ESRP1	HGNC	ENSG00000104413				49	0	0	95	25	20.8333
SNORA72	0	genome.wustl.edu	37	8	99054837	99054837	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	8	99054837	99054837	A	-	DEL	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970				80	0	0	78	19	19.5876
XPA	0	genome.wustl.edu	37	9	100437696	100437697	+	RNA	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	100437696	100437697	-	A	INS	XPA	ENST00000485042	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005:0.004	-	-	-	no_errors	XPA	HGNC	ENSG00000136936				31	0	0	45	16	26.2295
SMC2	0	genome.wustl.edu	37	9	106862422	106862422	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	106862422	106862422	A	-	DEL	SMC2	ENST00000286398	human	ensembl	74_37	+1	known	frame_shift_del	c.529	p.I179fs	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	-	no_errors	SMC2	HGNC	ENSG00000136824				32	0	0	41	6	12.766
ZNF462	0	genome.wustl.edu	37	9	109689491	109689491	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	109689491	109689491	C	-	DEL	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	frame_shift_del	c.3298	p.P1102fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				40	0	0	49	8	14.0351
SVEP1	0	genome.wustl.edu	37	9	113241917	113241917	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	113241917	113241917	T	-	DEL	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	frame_shift_del	c.2485	p.M829fs	1.000	NULL	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124				159	0	0	323	92	22.1687
MIR4668	0	genome.wustl.edu	37	9	114694384	114694385	+	RNA	DEL	AA	AA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	114694384	114694385	AA	-	DEL	MIR4668	ENST00000582284	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MIR4668	HGNC	ENSG00000266315				39	0	0	32	35	52.2388
SPTAN1	0	genome.wustl.edu	37	9	131339206	131339207	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	131339206	131339207	-	G	INS	SPTAN1	ENST00000358161	human	ensembl	74_37	+1	known	frame_shift_ins	c.756_757	p.A253fs	0.990:1.000	NULL	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF_hand_dom,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694				49	0	0	57	22	27.8481
FNBP1	0	genome.wustl.edu	37	9	132687243	132687243	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	132687243	132687243	T	-	DEL	FNBP1	ENST00000446176	human	ensembl	74_37	-1	known	frame_shift_del	c.983	p.N328fs	1.000	NULL	pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Ribosomal_S20,superfamily_HR1_rho-bd,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	FNBP1	HGNC	ENSG00000187239				16	0	0	30	8	21.0526
NCS1	0	genome.wustl.edu	37	9	132980141	132980142	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	132980141	132980142	-	G	INS	NCS1	ENST00000372398	human	ensembl	74_37	+1	known	frame_shift_ins	c.120_121	p.Q41fs	0.999:1.000	prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	NCS1	HGNC	ENSG00000107130				216	0	0	213	41	16.1417
FUBP3	0	genome.wustl.edu	37	9	133506076	133506076	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	133506076	133506076	C	-	DEL	FUBP3	ENST00000319725	human	ensembl	74_37	+1	known	frame_shift_del	c.1179	p.P395fs	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,pfam_KH_dom_type_2,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FUBP3	HGNC	ENSG00000107164				85	0	0	93	15	13.8889
AK8	0	genome.wustl.edu	37	9	135753607	135753607	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	135753607	135753607	G	-	DEL	AK8	ENST00000298545	human	ensembl	74_37	-1	known	frame_shift_del	c.36	p.E13fs	0.965	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	pfam_Adenylate_kin,superfamily_P-loop_NTPase,superfamily_Adenylate_kinase_lid-dom,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,prints_Adenylate_kin	-	no_errors	AK8	HGNC	ENSG00000165695				68	0	0	51	7	12.069
NPDC1	0	genome.wustl.edu	37	9	139934526	139934526	+	RNA	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	139934526	139934526	G	-	DEL	NPDC1	ENST00000472668	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	NPDC1	HGNC	ENSG00000107281				43	0	0	54	6	10
CNTLN	0	genome.wustl.edu	37	9	17135271	17135271	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	17135271	17135271	G	-	DEL	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	frame_shift_del	c.208	p.A72fs	0.002	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459				15	0	0	16	8	33.3333
SPINK4	0	genome.wustl.edu	37	9	33246634	33246635	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	33246634	33246635	AG	-	DEL	SPINK4	ENST00000379723	human	ensembl	74_37	+1	known	frame_shift_del	c.192_193	p.E65fs	0.002:0.181	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK4	HGNC	ENSG00000122711				98	0	0	149	34	18.5792
PTENP1	0	genome.wustl.edu	37	9	33675365	33675365	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	33675365	33675365	A	-	DEL	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984				8	0	0	9	7	43.75
DNAJB5	0	genome.wustl.edu	37	9	34996554	34996554	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	34996554	34996554	C	-	DEL	DNAJB5	ENST00000454002	human	ensembl	74_37	+1	known	frame_shift_del	c.720	p.P242fs	1.000	superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB5	HGNC	ENSG00000137094				45	0	0	58	6	9.375
KGFLP2	0	genome.wustl.edu	37	9	41962603	41962603	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	41962603	41962603	T	-	DEL	KGFLP2	ENST00000454645	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-204M4.2	Clone_based_vega_gene	ENSG00000204837				39	0	0	53	6	10.1695
KDM4C	0	genome.wustl.edu	37	9	7169998	7169999	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	7169998	7169999	-	A	INS	KDM4C	ENST00000381306	human	ensembl	74_37	+1	known	frame_shift_ins	c.3102_3103	p.S1036fs	0.006:0.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077				14	0	0	12	5	29.4118
PCSK5	0	genome.wustl.edu	37	9	78804619	78804620	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	78804619	78804620	-	T	INS	PCSK5	ENST00000545128	human	ensembl	74_37	+1	known	frame_shift_ins	c.2583_2584	p.L861fs	1.000:1.000	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_EG-like_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Growth_fac_rcpt_N_dom,superfamily_Prot_inh_propept,smart_Furin_repeat,smart_EG-like_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK5	HGNC	ENSG00000099139				33	0	0	83	23	21.6981
VPS13A	0	genome.wustl.edu	37	9	79999547	79999548	+	In_Frame_Ins	INS	-	-	TGA			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	79999547	79999548	-	TGA	INS	VPS13A	ENST00000357409	human	ensembl	74_37	+1	known	in_frame_ins	c.9236_9237	p.3083in_frame_insD	1.000:0.999	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				86	0	0	88	23	20.7207
AGTPBP1	0	genome.wustl.edu	37	9	88236193	88236193	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	88236193	88236193	T	-	DEL	AGTPBP1	ENST00000376109	human	ensembl	74_37	-1	known	frame_shift_del	c.2059	p.I687fs	1.000	NULL	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGTPBP1	HGNC	ENSG00000135049				43	0	0	42	9	17.6471
ASPN	0	genome.wustl.edu	37	9	95236979	95236979	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	95236979	95236979	A	-	DEL	ASPN	ENST00000375544	human	ensembl	74_37	-1	known	frame_shift_del	c.201	p.P68fs	0.936	pirsf_SLRP_I_decor/aspor/byglycan	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,pirsf_SLRP_I_decor/aspor/byglycan	-	no_errors	ASPN	HGNC	ENSG00000106819				57	0	0	76	19	20
WNK2	0	genome.wustl.edu	37	9	96062482	96062482	+	RNA	DEL	C	C	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	9	96062482	96062482	C	-	DEL	WNK2	ENST00000479696	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.095	-	-	-	no_errors	WNK2	HGNC	ENSG00000165238				105	0	0	84	18	17.6471
BTK	0	genome.wustl.edu	37	X	100608059	100608062	+	RNA	DEL	AAAA	AAAA	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	100608059	100608062	AAAA	-	DEL	BTK	ENST00000470069	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006:0.016:0.023:0.027	-	-	-	no_errors	BTK	HGNC	ENSG00000010671				24	0	0	34	13	27.6596
OFD1	0	genome.wustl.edu	37	X	13787350	13787350	+	RNA	DEL	T	T	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	13787350	13787350	T	-	DEL	OFD1	ENST00000490265	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	OFD1	HGNC	ENSG00000046651				18	0	0	29	14	32.5581
ASB11	0	genome.wustl.edu	37	X	15333660	15333660	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	15333660	15333660	A	-	DEL	ASB11	ENST00000480796	human	ensembl	74_37	-1	known	frame_shift_del	c.68	p.F23fs	1.000	NULL	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB11	HGNC	ENSG00000165192				99	0	0	62	43	40.9524
CTPS2	0	genome.wustl.edu	37	X	16609020	16609020	+	RNA	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	16609020	16609020	A	-	DEL	CTPS2	ENST00000483053	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTPS2	HGNC	ENSG00000047230				32	0	0	17	14	45.1613
BCOR	0	genome.wustl.edu	37	X	39931787	39931788	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	39931787	39931788	-	G	INS	BCOR	ENST00000378444	human	ensembl	74_37	-1	known	frame_shift_ins	c.2812_2811	p.T937fs	0.999:1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337				36	0	0	32	26	44.8276
KDM6A	0	genome.wustl.edu	37	X	44922797	44922798	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	44922797	44922798	TC	-	DEL	KDM6A	ENST00000382899	human	ensembl	74_37	+1	known	frame_shift_del	c.1679_1680	p.Q562fs	1.000:1.000	NULL	pfam_JmjC_dom,pfam_TPR_1,smart_TPR_repeat,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KDM6A	HGNC	ENSG00000147050				38	0	0	57	11	16.1765
ZC4H2	0	genome.wustl.edu	37	X	64139033	64139033	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	64139033	64139033	G	-	DEL	ZC4H2	ENST00000374839	human	ensembl	74_37	-1	known	frame_shift_del	c.450	p.I151fs	1.000	pfam_Znf-C4H2	pfam_Znf-C4H2	-	no_errors	ZC4H2	HGNC	ENSG00000126970				26	0	0	32	6	15.7895
TEX11	0	genome.wustl.edu	37	X	70127618	70127618	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	70127618	70127618	A	-	DEL	TEX11	ENST00000374333	human	ensembl	74_37	-1	known	frame_shift_del	c.22	p.S8fs	0.008	NULL	pfam_Meiosis_specific_SPO22,smart_TPR_repeat	-	no_errors	TEX11	HGNC	ENSG00000120498				50	0	0	34	21	38.1818
NAP1L2	0	genome.wustl.edu	37	X	72433105	72433106	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4306-01A-01D-1158-08	TCGA-CG-4306-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	87515ac6-17e2-43ac-a6ed-af54e8fa3e8f	c6b012b4-95e2-4c81-a11d-931c8a2ba665	X	72433105	72433106	-	A	INS	NAP1L2	ENST00000373517	human	ensembl	74_37	-1	known	frame_shift_ins	c.1224_1223	p.S409fs	0.999:1.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	NAP1L2	HGNC	ENSG00000186462				53	0	0	44	16	26.6667
