Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
NTNG1	0	genome.wustl.edu	37	1	107691262	107691262	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	107691262	107691262	T	A	SNP	NTNG1	ENST00000370068	human	ensembl	74_37	+1	known	missense	c.47	p.V16E	1.000	NULL	pfam_Laminin_N,pfam_EGF_laminin,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	NTNG1	HGNC	ENSG00000162631				238	0	0	181	52	22.3176
STXBP3	0	genome.wustl.edu	37	1	109342845	109342845	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	109342845	109342845	G	A	SNP	STXBP3	ENST00000370008	human	ensembl	74_37	+1	known	missense	c.1453	p.A485T	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	STXBP3	HGNC	ENSG00000116266				140	0	0	114	25	17.9856
ENSG00000226849	0	genome.wustl.edu	37	1	11130859	11130859	+	RNA	SNP	A	A	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	11130859	11130859	A	C	SNP	ENSG00000226849	ENST00000452378	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP4-635E18.7	Clone_based_vega_gene	ENSG00000226849				88	0	0	39	68	63.5514
ENSG00000242663	0	genome.wustl.edu	37	1	149754507	149754507	+	RNA	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	149754507	149754507	G	A	SNP	ENSG00000242663	ENST00000420462	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-196G18.21	Clone_based_vega_gene	ENSG00000242663				11	0	0	2	3	60
FLG2	0	genome.wustl.edu	37	1	152328248	152328248	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	152328248	152328248	C	T	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	missense	c.2014	p.V672I	0.002	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520				582	0	0	350	132	27.3859
OR10Z1	0	genome.wustl.edu	37	1	158576420	158576420	+	Silent	SNP	C	C	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	158576420	158576420	C	A	SNP	OR10Z1	ENST00000361284	human	ensembl	74_37	+1	known	silent	c.192	p.S64	0.305	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Z1	HGNC	ENSG00000198967				354	0	0	296	108	26.7327
ENSG00000228863	0	genome.wustl.edu	37	1	160640841	160640841	+	RNA	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	160640841	160640841	C	T	SNP	ENSG00000228863	ENST00000598917	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.987	-	-	-	no_errors	RP11-404F10.2	Clone_based_vega_gene	ENSG00000228863				23	0	0	3	4	57.1429
GAS5	0	genome.wustl.edu	37	1	173833295	173833295	+	RNA	SNP	A	A	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	173833295	173833295	A	G	SNP	GAS5	ENST00000363840	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GAS5	HGNC	ENSG00000234741				83	0	0	46	26	36.1111
BRINP2	0	genome.wustl.edu	37	1	177250031	177250031	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	177250031	177250031	G	C	SNP	BRINP2	ENST00000361539	human	ensembl	74_37	+1	known	missense	c.1719	p.Q573H	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP2	HGNC	ENSG00000198797				65	0	0	47	14	22.9508
KCNT2	0	genome.wustl.edu	37	1	196197281	196197281	+	RNA	SNP	C	C	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	196197281	196197281	C	G	SNP	KCNT2	ENST00000498426	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KCNT2	HGNC	ENSG00000162687				20	0	0	8	4	33.3333
PTPRC	0	genome.wustl.edu	37	1	198719669	198719669	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	198719669	198719669	G	T	SNP	PTPRC	ENST00000442510	human	ensembl	74_37	+1	known	nonsense	c.3121	p.E1041*	0.875	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC	ENSG00000081237				86	0	0	144	36	20
CHIT1	0	genome.wustl.edu	37	1	203188783	203188783	+	RNA	SNP	T	T	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	203188783	203188783	T	G	SNP	CHIT1	ENST00000506427	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	CHIT1	HGNC	ENSG00000133063				242	1	0.411523	107	35	24.6479
C1orf116	0	genome.wustl.edu	37	1	207198408	207198408	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	207198408	207198408	C	T	SNP	C1orf116	ENST00000359470	human	ensembl	74_37	-1	known	missense	c.107	p.S36N	1.000	NULL	NULL	-	no_errors	C1orf116	HGNC	ENSG00000182795				37	0	0	53	8	13.1148
ITPKB	0	genome.wustl.edu	37	1	226825434	226825434	+	Silent	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	226825434	226825434	C	T	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	silent	c.2571	p.R857	0.990	pfam_IPK	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772				47	0	0	32	3	8.57143
RYR2	0	genome.wustl.edu	37	1	237774171	237774171	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	237774171	237774171	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.4787	p.R1596K	0.999	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				58	0	0	26	13	33.3333
MAP1LC3C	0	genome.wustl.edu	37	1	242159615	242159615	+	Silent	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	242159615	242159615	G	A	SNP	MAP1LC3C	ENST00000357246	human	ensembl	74_37	-1	known	silent	c.294	p.S98	0.652	pfam_Atg8_fam,pfam_Atg12	pfam_Atg8_fam,pfam_Atg12	-	no_errors	MAP1LC3C	HGNC	ENSG00000197769				278	0	0	173	52	23.1111
HIVEP3	0	genome.wustl.edu	37	1	41979398	41979398	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	41979398	41979398	C	A	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.5494	p.D1832Y	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				157	0	0	60	18	23.0769
ARTN	0	genome.wustl.edu	37	1	44401761	44401761	+	Silent	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	44401761	44401761	G	A	SNP	ARTN	ENST00000414809	human	ensembl	74_37	+1	known	silent	c.81	p.A27	0.271	NULL	pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	ARTN	HGNC	ENSG00000117407				54	0	0	25	7	21.875
FGGY	0	genome.wustl.edu	37	1	60073530	60073530	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	60073530	60073530	T	A	SNP	FGGY	ENST00000303721	human	ensembl	74_37	+1	known	missense	c.959	p.M320K	1.000	pfam_Carb_kinase_FGGY_C,tigrfam_Carb_kinase_FGGY-rel	pfam_Carb_kinase_FGGY_C,pfam_Carb_kinase_FGGY_N,tigrfam_Carb_kinase_FGGY-rel	-	no_errors	FGGY	HGNC	ENSG00000172456				153	0	0	217	16	6.86695
DOCK7	0	genome.wustl.edu	37	1	63119745	63119745	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	63119745	63119745	C	T	SNP	DOCK7	ENST00000251157	human	ensembl	74_37	-1	known	missense	c.230	p.R77Q	1.000	pfam_DOCK_C/D_N	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK7	HGNC	ENSG00000116641				135	1	0.735294	63	56	47.0588
SERBP1	0	genome.wustl.edu	37	1	67895811	67895811	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	67895811	67895811	G	A	SNP	SERBP1	ENST00000370995	human	ensembl	74_37	-1	known	missense	c.173	p.A58V	1.000	NULL	pfam_HABP4_PAIRBP1-bd	-	no_errors	SERBP1	HGNC	ENSG00000142864				241	0	0	98	77	44
MTF2	0	genome.wustl.edu	37	1	93594824	93594824	+	RNA	SNP	T	T	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	93594824	93594824	T	A	SNP	MTF2	ENST00000489480	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.552	-	-	-	no_errors	MTF2	HGNC	ENSG00000143033				83	0	0	70	32	31.3725
TMEM56	0	genome.wustl.edu	37	1	95609526	95609526	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	95609526	95609526	C	A	SNP	TMEM56	ENST00000370203	human	ensembl	74_37	+1	novel	missense	c.69	p.F23L	1.000	NULL	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	-	no_errors	TMEM56	HGNC	ENSG00000152078				137	0	0	94	36	27.6923
TDRD1	0	genome.wustl.edu	37	10	115970506	115970506	+	Silent	SNP	C	C	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	10	115970506	115970506	C	A	SNP	TDRD1	ENST00000251864	human	ensembl	74_37	+1	known	silent	c.1551	p.G517	0.996	pfam_Tudor	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627				122	0	0	122	18	12.8571
PDZD8	0	genome.wustl.edu	37	10	119043857	119043857	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	10	119043857	119043857	A	C	SNP	PDZD8	ENST00000334464	human	ensembl	74_37	-1	known	missense	c.2387	p.L796W	1.000	NULL	pfam_PDZ,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_PDZ,smart_PDZ,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_PDZ,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PDZD8	HGNC	ENSG00000165650				106	0	0	79	23	22.549
PPP2R2D	0	genome.wustl.edu	37	10	133757520	133757520	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	10	133757520	133757520	C	T	SNP	PPP2R2D	ENST00000455566	human	ensembl	74_37	+1	known	nonsense	c.433	p.R145*	0.802	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2D	HGNC	ENSG00000175470				93	0	0	40	20	33.3333
USP54	0	genome.wustl.edu	37	10	75289641	75289641	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	10	75289641	75289641	G	C	SNP	USP54	ENST00000339859	human	ensembl	74_37	-1	known	missense	c.1857	p.S619R	0.987	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348				212	0	0	130	51	28.1768
NDST2	0	genome.wustl.edu	37	10	75567759	75567759	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	10	75567759	75567759	T	C	SNP	NDST2	ENST00000309979	human	ensembl	74_37	-1	known	missense	c.388	p.N130D	0.529	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST2	HGNC	ENSG00000166507				228	0	0	128	40	23.8095
LOC440040	0	genome.wustl.edu	37	11	49598099	49598099	+	RNA	SNP	A	A	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	11	49598099	49598099	A	C	SNP	LOC440040	ENST00000527477	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-707M1.1	Clone_based_vega_gene	ENSG00000205035				42	0	0	21	12	36.3636
DAGLA	0	genome.wustl.edu	37	11	61488300	61488300	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	11	61488300	61488300	G	A	SNP	DAGLA	ENST00000257215	human	ensembl	74_37	+1	known	missense	c.245	p.R82H	1.000	NULL	pfam_Lipase_3	-	no_errors	DAGLA	HGNC	ENSG00000134780				178	0	0	91	39	30
SLC3A2	0	genome.wustl.edu	37	11	62652974	62652974	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	11	62652974	62652974	C	T	SNP	SLC3A2	ENST00000377892	human	ensembl	74_37	+1	known	missense	c.1433	p.A478V	0.008	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	-	no_errors	SLC3A2	HGNC	ENSG00000168003				603	0	0	399	34	7.85219
APBB1	0	genome.wustl.edu	37	11	6432549	6432549	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	11	6432549	6432549	G	A	SNP	APBB1	ENST00000389906	human	ensembl	74_37	-1	known	missense	c.29	p.S10L	1.000	NULL	pfam_PTB/PI_dom,pfam_WW_dom,pfam_PTB,superfamily_WW_dom,smart_WW_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_WW_dom	-	no_errors	APBB1	HGNC	ENSG00000166313				273	0	0	63	46	42.2018
GRM5	0	genome.wustl.edu	37	11	88780628	88780628	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	11	88780628	88780628	C	T	SNP	GRM5	ENST00000305447	human	ensembl	74_37	-1	known	missense	c.413	p.R138H	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_5,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_1,pfscan_GPCR_3_C	-	no_errors	GRM5	HGNC	ENSG00000168959				121	0	0	74	17	18.6813
FAT3	0	genome.wustl.edu	37	11	92086577	92086577	+	Silent	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	11	92086577	92086577	G	A	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.1299	p.R433	0.248	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				37	0	0	21	7	25
KRT72	0	genome.wustl.edu	37	12	52992799	52992799	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	12	52992799	52992799	A	G	SNP	KRT72	ENST00000293745	human	ensembl	74_37	-1	known	missense	c.524	p.I175T	0.549	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT72	HGNC	ENSG00000170486				312	0	0	152	108	41.5385
ESPL1	0	genome.wustl.edu	37	12	53668761	53668761	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	12	53668761	53668761	C	T	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	missense	c.1667	p.A556V	0.988	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476				81	0	0	33	3	8.33333
HOXC10	0	genome.wustl.edu	37	12	54383121	54383121	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	12	54383121	54383121	T	G	SNP	HOXC10	ENST00000303460	human	ensembl	74_37	+1	known	missense	c.920	p.L307R	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXC10	HGNC	ENSG00000180818				148	0	0	77	35	31.25
SLC16A7	0	genome.wustl.edu	37	12	60173407	60173407	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	12	60173407	60173407	G	A	SNP	SLC16A7	ENST00000261187	human	ensembl	74_37	+1	known	missense	c.1384	p.V462I	0.016	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A7	HGNC	ENSG00000118596				48	0	0	32	10	23.8095
MSRB3	0	genome.wustl.edu	37	12	65720710	65720710	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	12	65720710	65720710	G	A	SNP	MSRB3	ENST00000355192	human	ensembl	74_37	+1	known	missense	c.202	p.E68K	1.000	pfam_Met_Sox_Rdtase_MsrB,superfamily_Mss4-like,tigrfam_Met_Sox_Rdtase_MsrB	pfam_Met_Sox_Rdtase_MsrB,superfamily_Mss4-like,tigrfam_Met_Sox_Rdtase_MsrB	-	no_errors	MSRB3	HGNC	ENSG00000174099				47	0	0	24	7	22.5806
CD4	0	genome.wustl.edu	37	12	6923370	6923370	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	12	6923370	6923370	C	A	SNP	CD4	ENST00000011653	human	ensembl	74_37	+1	known	missense	c.277	p.P93T	0.693	pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_I-set,pfam_NK_rcpt_2B4_Ig_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_CD4-extracel,pfam_Ig_C2-set,pfam_Tcell_CD4_Cterm,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_I-set,pfam_NK_rcpt_2B4_Ig_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Ag_CD4	-	no_errors	CD4	HGNC	ENSG00000010610				316	0	0	239	60	20.0669
FAM90A1	0	genome.wustl.edu	37	12	8375060	8375060	+	Silent	SNP	G	G	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	12	8375060	8375060	G	C	SNP	FAM90A1	ENST00000307435	human	ensembl	74_37	-1	known	silent	c.753	p.L251	0.000	NULL	NULL	-	no_errors	FAM90A1	HGNC	ENSG00000171847				180	0	0	119	11	8.46154
A2ML1	0	genome.wustl.edu	37	12	8988261	8988261	+	Silent	SNP	T	T	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	12	8988261	8988261	T	C	SNP	A2ML1	ENST00000299698	human	ensembl	74_37	+1	known	silent	c.642	p.Y214	0.996	NULL	pfam_A2M_comp,pfam_Macroglobln_a2,pfam_A2M_N_2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	A2ML1	HGNC	ENSG00000166535				128	0	0	43	24	35.8209
BIVM	0	genome.wustl.edu	37	13	103468859	103468859	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	13	103468859	103468859	C	G	SNP	BIVM	ENST00000257336	human	ensembl	74_37	+1	known	missense	c.560	p.P187R	1.000	NULL	NULL	-	no_errors	BIVM	HGNC	ENSG00000134897				211	0	0	115	52	31.1377
SLC46A3	0	genome.wustl.edu	37	13	29287281	29287281	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	13	29287281	29287281	G	A	SNP	SLC46A3	ENST00000266943	human	ensembl	74_37	-1	known	missense	c.596	p.S199L	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC46A3	HGNC	ENSG00000139508				147	0	0	63	32	33.6842
MTUS2-AS1	0	genome.wustl.edu	37	13	30061951	30061951	+	RNA	SNP	G	G	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	13	30061951	30061951	G	C	SNP	MTUS2-AS1	ENST00000323380	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MTUS2-AS1	HGNC	ENSG00000179141				64	0	0	28	10	26.3158
NAA16	0	genome.wustl.edu	37	13	41947902	41947902	+	Splice_Site	SNP	A	A	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	13	41947902	41947902	A	T	SNP	NAA16	ENST00000477452	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	NAA16	HGNC	ENSG00000172766				279	0	0	167	50	23.0415
ADCY4	0	genome.wustl.edu	37	14	24788315	24788315	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	14	24788315	24788315	C	T	SNP	ADCY4	ENST00000310677	human	ensembl	74_37	-1	known	missense	c.2945	p.R982H	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY4	HGNC	ENSG00000129467				310	0	0	125	40	24.2424
PRKD1	0	genome.wustl.edu	37	14	30095727	30095727	+	Silent	SNP	T	T	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	14	30095727	30095727	T	C	SNP	PRKD1	ENST00000331968	human	ensembl	74_37	-1	known	silent	c.1761	p.E587	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304				115	0	0	58	29	33.3333
NRXN3	0	genome.wustl.edu	37	14	80328211	80328211	+	Silent	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	14	80328211	80328211	C	T	SNP	NRXN3	ENST00000335750	human	ensembl	74_37	+1	known	silent	c.3090	p.S1030	0.993	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				68	0	0	32	9	21.9512
NPAP1	0	genome.wustl.edu	37	15	24921084	24921084	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	15	24921084	24921084	G	A	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	missense	c.70	p.A24T	0.000	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823				55	0	0	11	7	38.8889
WDR72	0	genome.wustl.edu	37	15	53815461	53815461	+	Silent	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	15	53815461	53815461	C	T	SNP	WDR72	ENST00000360509	human	ensembl	74_37	-1	known	silent	c.3207	p.V1069	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415				263	1	0.378788	187	78	29.434
HS3ST3A1	0	genome.wustl.edu	37	17	13400097	13400097	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	17	13400097	13400097	A	G	SNP	HS3ST3A1	ENST00000284110	human	ensembl	74_37	-1	known	missense	c.638	p.M213T	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST3A1	HGNC	ENSG00000153976				205	0	0	82	13	13.6842
HS3ST3B1	0	genome.wustl.edu	37	17	14248383	14248383	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	17	14248383	14248383	T	C	SNP	HS3ST3B1	ENST00000360954	human	ensembl	74_37	+1	known	missense	c.593	p.M198T	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST3B1	HGNC	ENSG00000125430				62	0	0	9	8	47.0588
ZNF624	0	genome.wustl.edu	37	17	16525840	16525840	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	17	16525840	16525840	T	G	SNP	ZNF624	ENST00000311331	human	ensembl	74_37	-1	known	missense	c.2360	p.K787T	0.999	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF624	HGNC	ENSG00000197566				158	0	0	74	4	5.12821
C17orf102	0	genome.wustl.edu	37	17	32906083	32906083	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	17	32906083	32906083	T	C	SNP	C17orf102	ENST00000357754	human	ensembl	74_37	-1	known	missense	c.217	p.T73A	0.024	NULL	NULL	-	no_errors	C17orf102	HGNC	ENSG00000197322				232	0	0	87	10	10.3093
PTGES3L-AARSD1	0	genome.wustl.edu	37	17	41102638	41102638	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	17	41102638	41102638	T	C	SNP	PTGES3L-AARSD1	ENST00000409399	human	ensembl	74_37	-1	known	missense	c.1733	p.Y578C	0.116	NULL	pfam_tRNA_SAD,pfam_CS_dom,pfam_Ala-tRNA-synth_IIc_N,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_HSP20-like_chaperone,smart_tRNA_SAD,pfscan_CS_dom,pfscan_Ala-tRNA-synth_IIc_core	-	no_errors	PTGES3L-AARSD1	HGNC	ENSG00000108825				112	0	0	27	26	49.0566
BRCA1	0	genome.wustl.edu	37	17	41245963	41245963	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	17	41245963	41245963	G	A	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	missense	c.1585	p.P529S	0.002	pirsf_BRCA1	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048				79	0	0	27	23	46
USP32	0	genome.wustl.edu	37	17	58299833	58299833	+	Silent	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	17	58299833	58299833	G	A	SNP	USP32	ENST00000300896	human	ensembl	74_37	-1	known	silent	c.1686	p.V562	0.856	pfam_Pept_C19_DUSP,smart_Pept_C19_DUSP	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,smart_EF_hand_dom,smart_Pept_C19_DUSP,pfscan_EF_hand_dom,pfscan_Peptidase_C19/C67,prints_Recoverin	-	no_errors	USP32	HGNC	ENSG00000170832				761	1	0.131234	377	122	24.4489
C17orf77	0	genome.wustl.edu	37	17	72588276	72588276	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	17	72588276	72588276	T	C	SNP	C17orf77	ENST00000328023	human	ensembl	74_37	+1	known	missense	c.91	p.C31R	0.000	NULL	NULL	-	no_errors	C17orf77	HGNC	ENSG00000182352				153	0	0	92	28	23.3333
TP53	0	genome.wustl.edu	37	17	7577532	7577532	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	17	7577532	7577532	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.749	p.P250L	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				138	0	0	38	48	55.814
OSBPL1A	0	genome.wustl.edu	37	18	21894248	21894248	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	18	21894248	21894248	G	A	SNP	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	missense	c.934	p.R312W	0.997	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447				202	0	0	192	38	16.5217
ATP8B1	0	genome.wustl.edu	37	18	55362738	55362738	+	Nonsense_Mutation	SNP	G	G	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	18	55362738	55362738	G	C	SNP	ATP8B1	ENST00000283684	human	ensembl	74_37	-1	known	nonsense	c.725	p.S242*	0.961	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B1	HGNC	ENSG00000081923				132	0	0	72	4	5.26316
RDH8	0	genome.wustl.edu	37	19	10129585	10129585	+	Silent	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	10129585	10129585	G	A	SNP	RDH8	ENST00000591589	human	ensembl	74_37	+1	known	silent	c.501	p.Q167	0.998	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pirsf_17beta_DH	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pirsf_17beta_DH,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	RDH8	HGNC	ENSG00000080511				183	0	0	34	28	45.1613
CACNA1A	0	genome.wustl.edu	37	19	13411396	13411396	+	Silent	SNP	A	A	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	13411396	13411396	A	G	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.2247	p.S749	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				355	1	0.280899	311	64	17.0667
PKN1	0	genome.wustl.edu	37	19	14561879	14561879	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	14561879	14561879	G	A	SNP	PKN1	ENST00000342216	human	ensembl	74_37	+1	known	missense	c.946	p.A316T	0.970	NULL	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN1	HGNC	ENSG00000123143				8	0	0	19	6	24
WIZ	0	genome.wustl.edu	37	19	15559049	15559049	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	15559049	15559049	G	A	SNP	WIZ	ENST00000389282	human	ensembl	74_37	-1	known	missense	c.70	p.P24S	0.948	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	WIZ	HGNC	ENSG00000011451				207	0	0	192	12	5.88235
ZNF738	0	genome.wustl.edu	37	19	21558721	21558721	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	21558721	21558721	G	A	SNP	ZNF738	ENST00000597810	human	ensembl	74_37	+1	putative	missense	c.274	p.D92N	0.845	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF738	HGNC	ENSG00000172687				135	0	0	374	23	5.79345
ZNF738	0	genome.wustl.edu	37	19	21558722	21558722	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	21558722	21558722	A	T	SNP	ZNF738	ENST00000597810	human	ensembl	74_37	+1	putative	missense	c.275	p.D92V	0.854	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF738	HGNC	ENSG00000172687				136	0	0	368	23	5.88235
ZNF599	0	genome.wustl.edu	37	19	35250430	35250430	+	Nonsense_Mutation	SNP	T	T	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	35250430	35250430	T	A	SNP	ZNF599	ENST00000329285	human	ensembl	74_37	-1	known	nonsense	c.1276	p.K426*	0.992	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF599	HGNC	ENSG00000153896				107	0	0	323	23	6.6474
LILRP2	0	genome.wustl.edu	37	19	55221559	55221559	+	RNA	SNP	G	G	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	55221559	55221559	G	T	SNP	LILRP2	ENST00000413439	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	LILRP2	HGNC	ENSG00000170858				120	0	0	74	4	5.12821
LILRP2	0	genome.wustl.edu	37	19	55221570	55221570	+	RNA	SNP	A	A	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	55221570	55221570	A	C	SNP	LILRP2	ENST00000413439	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	LILRP2	HGNC	ENSG00000170858				138	1	0.719424	70	4	5.40541
GP6	0	genome.wustl.edu	37	19	55526287	55526287	+	Silent	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	55526287	55526287	G	A	SNP	GP6	ENST00000310373	human	ensembl	74_37	-1	known	silent	c.1026	p.T342	0.000	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	GP6	HGNC	ENSG00000088053				91	0	0	32	19	37.2549
ENSG00000267751	0	genome.wustl.edu	37	19	571674	571674	+	RNA	SNP	A	A	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	571674	571674	A	T	SNP	ENSG00000267751	ENST00000589457	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AC009005.2	Clone_based_vega_gene	ENSG00000267751				23	0	0	24	6	20
WDR18	0	genome.wustl.edu	37	19	992110	992110	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	19	992110	992110	C	T	SNP	WDR18	ENST00000251289	human	ensembl	74_37	+1	known	missense	c.1087	p.L363F	0.961	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR18	HGNC	ENSG00000065268				18	0	0	3	4	57.1429
IL1RL2	0	genome.wustl.edu	37	2	102804325	102804325	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	2	102804325	102804325	G	A	SNP	IL1RL2	ENST00000441515	human	ensembl	74_37	+1	known	nonsense	c.78	p.W26*	0.016	NULL	pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom,prints_IL-1_rcpt_I/II-typ	-	no_errors	IL1RL2	HGNC	ENSG00000115598				263	0	0	99	43	30.2817
XIRP2	0	genome.wustl.edu	37	2	168104460	168104460	+	Silent	SNP	T	T	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	2	168104460	168104460	T	G	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	silent	c.6558	p.T2186	0.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092				95	0	0	76	25	24.7525
XIRP2	0	genome.wustl.edu	37	2	168107180	168107180	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	2	168107180	168107180	G	A	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.9278	p.R3093H	0.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092				126	0	0	95	38	28.5714
PGAP1	0	genome.wustl.edu	37	2	197708744	197708744	+	Nonsense_Mutation	SNP	G	G	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	2	197708744	197708744	G	C	SNP	PGAP1	ENST00000354764	human	ensembl	74_37	-1	known	nonsense	c.2393	p.S798*	0.000	NULL	pfam_PGAP1-like	-	no_errors	PGAP1	HGNC	ENSG00000197121				71	0	0	49	20	28.9855
NBEAL1	0	genome.wustl.edu	37	2	204000806	204000806	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	2	204000806	204000806	T	A	SNP	NBEAL1	ENST00000449802	human	ensembl	74_37	+1	known	missense	c.4133	p.I1378N	0.981	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL1	HGNC	ENSG00000144426				128	0	0	76	23	23.2323
INPP5D	0	genome.wustl.edu	37	2	233986859	233986859	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	2	233986859	233986859	C	A	SNP	INPP5D	ENST00000359570	human	ensembl	74_37	+1	known	missense	c.241	p.Q81K	1.000	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_Endo/exonuclease/phosphatase,pfam_SH2,superfamily_Endo/exonuclease/phosphatase,smart_SH2,smart_IPPc,pfscan_SH2,prints_SH2	-	no_errors	INPP5D	HGNC	ENSG00000168918				208	0	0	79	13	14.1304
NEU4	0	genome.wustl.edu	37	2	242758315	242758315	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	2	242758315	242758315	G	A	SNP	NEU4	ENST00000325935	human	ensembl	74_37	+1	known	missense	c.1435	p.A479T	0.000	NULL	superfamily_Sialidases	-	no_errors	NEU4	HGNC	ENSG00000204099				39	0	0	10	7	41.1765
TET3	0	genome.wustl.edu	37	2	74328640	74328640	+	Silent	SNP	G	G	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	2	74328640	74328640	G	C	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	silent	c.4320	p.L1440	0.998	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605				37	0	0	21	8	27.5862
HSPA12B	0	genome.wustl.edu	37	20	3726571	3726571	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	20	3726571	3726571	G	A	SNP	HSPA12B	ENST00000254963	human	ensembl	74_37	+1	known	missense	c.568	p.E190K	1.000	NULL	NULL	-	no_errors	HSPA12B	HGNC	ENSG00000132622				258	0	0	95	43	31.1594
BCL2L13	0	genome.wustl.edu	37	22	18209612	18209612	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	22	18209612	18209612	C	T	SNP	BCL2L13	ENST00000317582	human	ensembl	74_37	+1	known	missense	c.770	p.S257L	0.999	NULL	pfam_Blc2_fam,pfscan_Bcl2-like	-	no_errors	BCL2L13	HGNC	ENSG00000099968				104	0	0	50	21	29.5775
BCL2L13	0	genome.wustl.edu	37	22	18209747	18209747	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	22	18209747	18209747	C	G	SNP	BCL2L13	ENST00000317582	human	ensembl	74_37	+1	known	missense	c.905	p.S302C	1.000	NULL	pfam_Blc2_fam,pfscan_Bcl2-like	-	no_errors	BCL2L13	HGNC	ENSG00000099968				134	0	0	67	7	9.45946
SGSM1	0	genome.wustl.edu	37	22	25313668	25313668	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	22	25313668	25313668	A	G	SNP	SGSM1	ENST00000400359	human	ensembl	74_37	+1	known	missense	c.3137	p.D1046G	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM1	HGNC	ENSG00000167037				110	0	0	57	4	6.55738
ZNRF3	0	genome.wustl.edu	37	22	29445281	29445281	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	22	29445281	29445281	G	A	SNP	ZNRF3	ENST00000544604	human	ensembl	74_37	+1	known	missense	c.1112	p.R371H	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF3	HGNC	ENSG00000183579				211	0	0	94	34	26.5625
ZBED2	0	genome.wustl.edu	37	3	111312961	111312961	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	111312961	111312961	C	G	SNP	ZBED2	ENST00000317012	human	ensembl	74_37	-1	known	missense	c.88	p.E30Q	0.192	NULL	pfam_Znf_BED_prd,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED2	HGNC	ENSG00000177494				192	0	0	116	7	5.69106
PHLDB2	0	genome.wustl.edu	37	3	111659435	111659435	+	Silent	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	111659435	111659435	G	A	SNP	PHLDB2	ENST00000393925	human	ensembl	74_37	+1	known	silent	c.2340	p.Q780	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB2	HGNC	ENSG00000144824				75	0	0	40	13	24.5283
WDR52	0	genome.wustl.edu	37	3	113120574	113120574	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	113120574	113120574	C	T	SNP	WDR52	ENST00000393845	human	ensembl	74_37	-1	known	missense	c.1183	p.E395K	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC	ENSG00000206530				86	0	0	79	20	20.202
GOLGB1	0	genome.wustl.edu	37	3	121445864	121445864	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	121445864	121445864	C	T	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	missense	c.427	p.E143K	0.054	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230				93	0	0	52	20	27.7778
DNAH1	0	genome.wustl.edu	37	3	52392752	52392752	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	52392752	52392752	C	T	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	missense	c.4265	p.T1422M	0.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841				96	0	0	47	18	27.6923
CNTN3	0	genome.wustl.edu	37	3	74351856	74351856	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	74351856	74351856	C	G	SNP	CNTN3	ENST00000263665	human	ensembl	74_37	-1	known	missense	c.1771	p.D591H	0.976	pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN3	HGNC	ENSG00000113805				61	0	0	33	11	25
OR5H14	0	genome.wustl.edu	37	3	97869090	97869090	+	Silent	SNP	C	C	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	97869090	97869090	C	G	SNP	OR5H14	ENST00000437310	human	ensembl	74_37	+1	known	silent	c.861	p.P287	0.506	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5H14	HGNC	ENSG00000236032				47	0	0	47	20	29.8507
NDST3	0	genome.wustl.edu	37	4	119059215	119059215	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	4	119059215	119059215	G	A	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	missense	c.1231	p.G411S	0.981	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100				134	0	0	41	30	42.2535
DND1	0	genome.wustl.edu	37	5	140052407	140052407	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	5	140052407	140052407	G	A	SNP	DND1	ENST00000542735	human	ensembl	74_37	-1	known	missense	c.227	p.P76L	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	DND1	HGNC	ENSG00000256453				30	0	0	13	5	27.7778
CYFIP2	0	genome.wustl.edu	37	5	156714037	156714037	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	5	156714037	156714037	G	C	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	missense	c.127	p.D43H	1.000	pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP2	HGNC	ENSG00000055163				84	0	0	24	18	42.8571
GRIK2	0	genome.wustl.edu	37	6	102247533	102247533	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	6	102247533	102247533	C	T	SNP	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	missense	c.962	p.A321V	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418				258	0	0	178	57	24.2553
PERP	0	genome.wustl.edu	37	6	138428360	138428360	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	6	138428360	138428360	C	T	SNP	PERP	ENST00000421351	human	ensembl	74_37	-1	known	missense	c.118	p.D40N	0.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin	-	no_errors	PERP	HGNC	ENSG00000112378				137	0	0	120	15	11.1111
SCAND3	0	genome.wustl.edu	37	6	28543037	28543037	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	6	28543037	28543037	C	G	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	missense	c.1445	p.R482T	0.104	superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040				119	0	0	98	29	22.8346
RGL2	0	genome.wustl.edu	37	6	33263368	33263368	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	6	33263368	33263368	C	A	SNP	RGL2	ENST00000497454	human	ensembl	74_37	-1	known	nonsense	c.937	p.E313*	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL2	HGNC	ENSG00000237441				104	1	0.952381	64	10	13.5135
ITPR3	0	genome.wustl.edu	37	6	33652629	33652629	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	6	33652629	33652629	A	G	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	missense	c.5216	p.D1739G	1.000	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				214	1	0.465116	160	14	8.04598
EYS	0	genome.wustl.edu	37	6	66063378	66063378	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	6	66063378	66063378	C	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.1432	p.E478K	0.036	NULL	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107				107	0	0	82	35	29.9145
ENSG00000243501	0	genome.wustl.edu	37	6	73952192	73952192	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	6	73952192	73952192	G	A	SNP	ENSG00000243501	ENST00000423730	human	ensembl	74_37	-1	known	missense	c.49	p.P17S	0.005	NULL	NULL	-	no_errors	RP11-257K9.8	Clone_based_vega_gene	ENSG00000243501				167	0	0	93	30	24.3902
MRAP2	0	genome.wustl.edu	37	6	84798909	84798909	+	Silent	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	6	84798909	84798909	C	T	SNP	MRAP2	ENST00000257776	human	ensembl	74_37	+1	known	silent	c.327	p.N109	0.001	NULL	NULL	-	no_errors	MRAP2	HGNC	ENSG00000135324				163	0	0	104	51	32.9032
PTPRZ1	0	genome.wustl.edu	37	7	121653684	121653684	+	Silent	SNP	T	T	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	7	121653684	121653684	T	C	SNP	PTPRZ1	ENST00000393386	human	ensembl	74_37	+1	known	silent	c.4584	p.S1528	0.231	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRZ1	HGNC	ENSG00000106278				110	0	0	50	11	18.0328
KMT2C	0	genome.wustl.edu	37	7	151859927	151859927	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	7	151859927	151859927	C	A	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	nonsense	c.10735	p.G3579*	0.389	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				125	0	0	54	4	6.89655
FAM220A	0	genome.wustl.edu	37	7	6370486	6370486	+	Silent	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	7	6370486	6370486	C	T	SNP	FAM220A	ENST00000313324	human	ensembl	74_37	-1	known	silent	c.300	p.P100	0.000	NULL	NULL	-	no_errors	FAM220A	HGNC	ENSG00000178397				136	0	0	103	21	16.9355
ZFAT	0	genome.wustl.edu	37	8	135614852	135614852	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	8	135614852	135614852	G	C	SNP	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	missense	c.1110	p.I370M	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827				157	0	0	132	10	7.04225
SLC45A4	0	genome.wustl.edu	37	8	142229090	142229090	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	8	142229090	142229090	C	G	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.649	p.D217H	1.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				203	0	0	101	31	23.4848
CPSF1	0	genome.wustl.edu	37	8	145621891	145621891	+	Silent	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	8	145621891	145621891	G	A	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	silent	c.2748	p.G916	0.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894				310	0	0	170	73	30.0412
ERICH1	0	genome.wustl.edu	37	8	642594	642594	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	8	642594	642594	G	A	SNP	ERICH1	ENST00000262109	human	ensembl	74_37	-1	known	missense	c.188	p.P63L	0.000	NULL	NULL	-	no_errors	ERICH1	HGNC	ENSG00000104714				127	0	0	35	17	32.6923
ZFHX4	0	genome.wustl.edu	37	8	77767078	77767078	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	8	77767078	77767078	G	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.7921	p.E2641K	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				107	0	0	54	23	29.8701
RGS3	0	genome.wustl.edu	37	9	116346512	116346512	+	Silent	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	9	116346512	116346512	G	A	SNP	RGS3	ENST00000350696	human	ensembl	74_37	+1	known	silent	c.2820	p.R940	1.000	NULL	pfam_RGS_dom,pfam_C2_dom,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_C2_dom,superfamily_PDZ,smart_C2_dom,smart_PDZ,smart_Regulat_G_prot_signal_superfam,pfscan_C2_dom,pfscan_PDZ,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS3	HGNC	ENSG00000138835				207	1	0.480769	87	34	28.0992
DFNB31	0	genome.wustl.edu	37	9	117185721	117185721	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	9	117185721	117185721	A	G	SNP	DFNB31	ENST00000362057	human	ensembl	74_37	-1	known	missense	c.1499	p.I500T	0.997	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	DFNB31	HGNC	ENSG00000095397				301	0	0	175	33	15.8654
SPATA31D1	0	genome.wustl.edu	37	9	84607898	84607898	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	9	84607898	84607898	T	G	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	missense	c.2513	p.F838C	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929				166	1	0.598802	78	32	29.0909
FAM120A	0	genome.wustl.edu	37	9	96214522	96214522	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	9	96214522	96214522	G	A	SNP	FAM120A	ENST00000333936	human	ensembl	74_37	+1	known	missense	c.325	p.V109I	1.000	NULL	NULL	-	no_errors	FAM120A	HGNC	ENSG00000048828				28	0	0	4	11	73.3333
NRK	0	genome.wustl.edu	37	X	105197150	105197150	+	Silent	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	X	105197150	105197150	C	T	SNP	NRK	ENST00000428173	human	ensembl	74_37	+1	known	silent	c.4641	p.C1547	1.000	pfam_Citron,smart_Citron	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Citron,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	NRK	HGNC	ENSG00000123572				8	0	0	7	4	36.3636
HUWE1	0	genome.wustl.edu	37	X	53564520	53564520	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	X	53564520	53564520	C	T	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.12134	p.R4045Q	1.000	superfamily_HECT,smart_HECT,pfscan_HECT	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758				24	0	0	4	8	66.6667
PIGR	0	genome.wustl.edu	37	1	207110552	207110554	+	In_Frame_Del	DEL	CAC	CAC	-			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	CAC	CAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	1	207110552	207110554	CAC	-	DEL	PIGR	ENST00000356495	human	ensembl	74_37	-1	known	in_frame_del	c.933_931	p.V311in_frame_del	0.000:0.000:0.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PIGR	HGNC	ENSG00000162896				137	0	0	155	27	14.8352
BEST3	0	genome.wustl.edu	37	12	70049361	70049362	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	12	70049361	70049362	-	G	INS	BEST3	ENST00000330891	human	ensembl	74_37	-1	known	frame_shift_ins	c.1333_1332	p.R444fs	0.001:0.001	NULL	pfam_Bestrophin/UPF0187	-	no_errors	BEST3	HGNC	ENSG00000127325				174	1	0.571429	127	33	20.625
MYO16	0	genome.wustl.edu	37	13	109661386	109661386	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	13	109661386	109661386	T	-	DEL	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	frame_shift_del	c.2518	p.F842fs	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515				158	0	0	103	20	16.2602
COL4A1	0	genome.wustl.edu	37	13	110838820	110838821	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	13	110838820	110838821	-	G	INS	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	frame_shift_ins	c.1809_1808	p.G604fs	0.909:1.000	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498				253	0	0	142	12	7.79221
KBTBD7	0	genome.wustl.edu	37	13	41766772	41766775	+	Frame_Shift_Del	DEL	CTAG	CTAG	-			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	CTAG	CTAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	13	41766772	41766775	CTAG	-	DEL	KBTBD7	ENST00000379483	human	ensembl	74_37	-1	known	frame_shift_del	c.1622_1619	p.A540fs	1.000:1.000:1.000:1.000	pirsf_Kelch-like_gigaxonin	pfam_BTB_POZ,pfam_BACK,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD7	HGNC	ENSG00000120696				393	0	0	199	49	19.7581
MBIP	0	genome.wustl.edu	37	14	36770037	36770037	+	RNA	DEL	A	A	-			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	14	36770037	36770037	A	-	DEL	MBIP	ENST00000604154	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.241	-	-	-	no_errors	MBIP	HGNC	ENSG00000151332				27	0	0	13	2	13.3333
TPPP3	0	genome.wustl.edu	37	16	67424253	67424254	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	16	67424253	67424254	CT	-	DEL	TPPP3	ENST00000290942	human	ensembl	74_37	-1	known	frame_shift_del	c.355_354	p.G120fs	0.012:0.009	pfam_P25-alpha	pfam_P25-alpha	-	no_errors	TPPP3	HGNC	ENSG00000159713				433	0	0	125	25	16.6667
BIRC6	0	genome.wustl.edu	37	2	32673875	32673876	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	2	32673875	32673876	-	A	INS	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	frame_shift_ins	c.4497_4498	p.S1499fs	0.998:1.000	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760				170	0	0	72	27	27.2727
ENSG00000230440	0	genome.wustl.edu	37	20	26113543	26113543	+	RNA	DEL	A	A	-			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	20	26113543	26113543	A	-	DEL	ENSG00000230440	ENST00000416563	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.089	-	-	-	no_errors	RP13-329D4.3	Clone_based_vega_gene	ENSG00000230440				17	0	0	9	2	18.1818
CENPB	0	genome.wustl.edu	37	20	3766368	3766369	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	20	3766368	3766369	-	T	INS	CENPB	ENST00000379751	human	ensembl	74_37	-1	known	frame_shift_ins	c.763_762	p.A254fs	0.478:0.480	pfam_DDE_SF_endonuclease_CENPB-like	pfam_Centromere_CenpB_dimerisation,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	CENPB	HGNC	ENSG00000125817				70	0	0	37	4	9.7561
FETUB	0	genome.wustl.edu	37	3	186370130	186370130	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	186370130	186370130	A	-	DEL	FETUB	ENST00000265029	human	ensembl	74_37	+1	known	frame_shift_del	c.859	p.N288fs	0.000	NULL	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	FETUB	HGNC	ENSG00000090512				484	0	0	218	78	26.3514
CTDSPL	0	genome.wustl.edu	37	3	38017246	38017246	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	38017246	38017246	G	-	DEL	CTDSPL	ENST00000273179	human	ensembl	74_37	+1	known	frame_shift_del	c.566	p.A190fs	1.000	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF,tigrfam_Dullard_phosphatase	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF,tigrfam_Dullard_phosphatase	-	no_errors	CTDSPL	HGNC	ENSG00000144677				336	0	0	167	50	23.0415
USP19	0	genome.wustl.edu	37	3	49149979	49149987	+	In_Frame_Del	DEL	AAAGCAGAG	AAAGCAGAG	-			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	AAAGCAGAG	AAAGCAGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	3	49149979	49149987	AAAGCAGAG	-	DEL	USP19	ENST00000398888	human	ensembl	74_37	-1	known	in_frame_del	c.2280_2272	p.LCF758in_frame_del	0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_MYND,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom,pfscan_Znf_MYND,pfscan_Peptidase_C19/C67	-	no_errors	USP19	HGNC	ENSG00000172046				227	0	0	107	16	13.0081
ATP10B	0	genome.wustl.edu	37	5	160067471	160067472	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	5	160067471	160067472	-	A	INS	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	frame_shift_ins	c.997_996	p.V332fs	0.033:0.042	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322				264	0	0	78	42	35
CD99	0	genome.wustl.edu	37	X	2637596	2637597	+	RNA	INS	-	-	A			TCGA-CG-4449-01A-01D-1158-08	TCGA-CG-4449-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fa76e231-afc1-490d-8463-4438ee64a36f	1318498f-4165-4777-b997-e3ec9346d8ef	X	2637596	2637597	-	A	INS	CD99	ENST00000497752	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004:0.003	-	-	-	no_errors	CD99	HGNC	ENSG00000002586				297	0	0	134	69	33.9901
