Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
CDC14A	0	genome.wustl.edu	37	1	100856294	100856294	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	100856294	100856294	A	G	SNP	CDC14A	ENST00000361544	human	ensembl	74_37	+1	known	missense	c.223	p.S75G	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	CDC14A	HGNC	ENSG00000079335				53	0	0	41	25	37.8788
COL11A1	0	genome.wustl.edu	37	1	103379199	103379199	+	Silent	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	103379199	103379199	A	C	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	silent	c.4062	p.G1354	0.823	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				81	0	0	135	51	27.4194
KIF1B	0	genome.wustl.edu	37	1	10356694	10356694	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	10356694	10356694	G	A	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	missense	c.1694	p.R565K	1.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				45	0	0	50	8	13.7931
NTNG1	0	genome.wustl.edu	37	1	107937799	107937799	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	107937799	107937799	C	T	SNP	NTNG1	ENST00000370068	human	ensembl	74_37	+1	known	missense	c.911	p.T304I	1.000	pfam_EGF_laminin,smart_EGF_laminin	pfam_Laminin_N,pfam_EGF_laminin,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	NTNG1	HGNC	ENSG00000162631				72	0	0	160	72	31.0345
EPS8L3	0	genome.wustl.edu	37	1	110302334	110302334	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	110302334	110302334	T	G	SNP	EPS8L3	ENST00000369805	human	ensembl	74_37	-1	known	missense	c.221	p.D74A	0.870	pfam_PTB	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L3	HGNC	ENSG00000198758				75	0	0	67	6	8.21918
ALX3	0	genome.wustl.edu	37	1	110603359	110603359	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	110603359	110603359	G	A	SNP	ALX3	ENST00000369792	human	ensembl	74_37	-1	known	missense	c.1028	p.T343M	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	ALX3	HGNC	ENSG00000156150				126	0	0	61	28	31.4607
CEPT1	0	genome.wustl.edu	37	1	111726093	111726093	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	111726093	111726093	A	G	SNP	CEPT1	ENST00000357172	human	ensembl	74_37	+1	known	missense	c.1015	p.M339V	1.000	pirsf_CHOPT	pfam_CDP-OH_P_trans,pirsf_CHOPT	-	no_errors	CEPT1	HGNC	ENSG00000134255				94	0	0	114	57	33.3333
VPS13D	0	genome.wustl.edu	37	1	12316432	12316432	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	12316432	12316432	G	A	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.712	p.V238I	1.000	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707				252	1	0.395257	176	30	14.5631
ADAMTSL4	0	genome.wustl.edu	37	1	150531794	150531794	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	150531794	150531794	G	A	SNP	ADAMTSL4	ENST00000369039	human	ensembl	74_37	+1	known	missense	c.2864	p.R955H	0.774	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL4	HGNC	ENSG00000143382				119	0	0	58	27	31.7647
TCHH	0	genome.wustl.edu	37	1	152081704	152081704	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	152081704	152081704	C	T	SNP	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	missense	c.3989	p.R1330H	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450				364	0	0	248	101	28.9398
HRNR	0	genome.wustl.edu	37	1	152186045	152186045	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	152186045	152186045	C	G	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.8060	p.R2687P	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915				123	0	0	45	75	62.5
ATP8B2	0	genome.wustl.edu	37	1	154313343	154313343	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	154313343	154313343	C	T	SNP	ATP8B2	ENST00000368489	human	ensembl	74_37	+1	known	missense	c.1147	p.R383C	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B2	HGNC	ENSG00000143515				208	0	0	122	54	30.6818
C1orf85	0	genome.wustl.edu	37	1	156264188	156264188	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	156264188	156264188	T	C	SNP	C1orf85	ENST00000362007	human	ensembl	74_37	-1	known	missense	c.547	p.R183G	0.000	NULL	NULL	-	no_errors	C1orf85	HGNC	ENSG00000198715				87	0	0	55	25	31.25
ARHGEF11	0	genome.wustl.edu	37	1	156906671	156906671	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	156906671	156906671	C	T	SNP	ARHGEF11	ENST00000368194	human	ensembl	74_37	-1	known	missense	c.4567	p.A1523T	0.979	NULL	pfam_RGS-like_dom,pfam_DH-domain,pfam_PDZ,pfam_RGS_dom,superfamily_DH-domain,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_Regulat_G_prot_signal_superfam,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_DH-domain	-	no_errors	ARHGEF11	HGNC	ENSG00000132694				239	0	0	113	73	39.2473
CD1D	0	genome.wustl.edu	37	1	158152853	158152853	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	158152853	158152853	G	A	SNP	CD1D	ENST00000368171	human	ensembl	74_37	+1	known	missense	c.793	p.A265T	0.031	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1D	HGNC	ENSG00000158473				175	0	0	81	53	39.5522
OR10R2	0	genome.wustl.edu	37	1	158449945	158449945	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	158449945	158449945	A	G	SNP	OR10R2	ENST00000368152	human	ensembl	74_37	+1	known	missense	c.278	p.Y93C	0.268	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10R2	HGNC	ENSG00000198965				225	0	0	366	24	6.15385
PVRL4	0	genome.wustl.edu	37	1	161047443	161047443	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	161047443	161047443	G	A	SNP	PVRL4	ENST00000368012	human	ensembl	74_37	-1	known	missense	c.530	p.P177L	0.996	pfam_CD80_C2-set,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PVRL4	HGNC	ENSG00000143217				84	0	0	46	23	33.3333
DDR2	0	genome.wustl.edu	37	1	162749971	162749971	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	162749971	162749971	G	T	SNP	DDR2	ENST00000367921	human	ensembl	74_37	+1	known	missense	c.2503	p.D835Y	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DDR2	HGNC	ENSG00000162733				168	0	0	198	97	32.8814
ARHGEF19	0	genome.wustl.edu	37	1	16534699	16534699	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	16534699	16534699	T	C	SNP	ARHGEF19	ENST00000270747	human	ensembl	74_37	-1	known	missense	c.434	p.Q145R	0.991	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF19	HGNC	ENSG00000142632				68	0	0	41	20	32.7869
ESPNP	0	genome.wustl.edu	37	1	17030623	17030623	+	RNA	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	17030623	17030623	A	G	SNP	ESPNP	ENST00000492551	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	ESPNP	HGNC	ENSG00000268869				42	0	0	35	8	18.6047
PRRC2C	0	genome.wustl.edu	37	1	171557571	171557571	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	171557571	171557571	A	G	SNP	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	missense	c.8126	p.Y2709C	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523				60	0	0	63	25	28.4091
ATP13A2	0	genome.wustl.edu	37	1	17313329	17313329	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	17313329	17313329	G	A	SNP	ATP13A2	ENST00000326735	human	ensembl	74_37	-1	known	missense	c.3206	p.A1069V	0.834	tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A2	HGNC	ENSG00000159363				40	0	0	24	11	31.4286
CENPL	0	genome.wustl.edu	37	1	173776423	173776423	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	173776423	173776423	C	T	SNP	CENPL	ENST00000356198	human	ensembl	74_37	-1	known	silent	c.402	p.P134	0.038	NULL	NULL	-	no_errors	CENPL	HGNC	ENSG00000120334				88	0	0	48	26	35.1351
TNN	0	genome.wustl.edu	37	1	175067522	175067522	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	175067522	175067522	C	T	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	missense	c.1910	p.T637M	0.745	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332				149	0	0	94	45	32.3741
RASAL2	0	genome.wustl.edu	37	1	178421736	178421736	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	178421736	178421736	G	A	SNP	RASAL2	ENST00000367649	human	ensembl	74_37	+1	known	missense	c.1958	p.R653Q	1.000	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP	pfam_DUF3498,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,superfamily_PP1_inhibitor,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	RASAL2	HGNC	ENSG00000075391				112	0	0	126	57	31.1475
ZNF648	0	genome.wustl.edu	37	1	182026670	182026670	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	182026670	182026670	G	A	SNP	ZNF648	ENST00000339948	human	ensembl	74_37	-1	novel	missense	c.476	p.A159V	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930				68	0	0	55	26	32.0988
CFHR2	0	genome.wustl.edu	37	1	196927034	196927034	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	196927034	196927034	A	C	SNP	CFHR2	ENST00000367415	human	ensembl	74_37	+1	known	missense	c.444	p.K148N	0.426	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR2	HGNC	ENSG00000080910				106	0	0	89	39	30.4688
LAD1	0	genome.wustl.edu	37	1	201358401	201358401	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	201358401	201358401	C	T	SNP	LAD1	ENST00000367313	human	ensembl	74_37	-1	known	silent	c.111	p.E37	0.997	pirsf_Ladinin_1	pirsf_Ladinin_1	-	no_errors	LAD1	HGNC	ENSG00000159166				57	0	0	41	22	34.9206
IPO9	0	genome.wustl.edu	37	1	201842072	201842072	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	201842072	201842072	G	A	SNP	IPO9	ENST00000361565	human	ensembl	74_37	+1	known	missense	c.2693	p.R898H	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO9	HGNC	ENSG00000198700				64	0	0	41	23	35.9375
ADIPOR1	0	genome.wustl.edu	37	1	202910745	202910745	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	202910745	202910745	G	A	SNP	ADIPOR1	ENST00000340990	human	ensembl	74_37	-1	known	missense	c.1084	p.R362C	1.000	NULL	pfam_HlyIII-related	-	no_errors	ADIPOR1	HGNC	ENSG00000159346				80	0	0	84	21	20
TMCC2	0	genome.wustl.edu	37	1	205238475	205238475	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	205238475	205238475	A	C	SNP	TMCC2	ENST00000358024	human	ensembl	74_37	+1	known	missense	c.1145	p.Q382P	1.000	pfam_Predicted_TM_coiled-coil_2	pfam_Predicted_TM_coiled-coil_2,superfamily_t-SNARE	-	no_errors	TMCC2	HGNC	ENSG00000133069				54	0	0	33	13	28.2609
IKBKE	0	genome.wustl.edu	37	1	206667321	206667321	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	206667321	206667321	A	G	SNP	IKBKE	ENST00000367120	human	ensembl	74_37	+1	known	missense	c.2114	p.E705G	0.960	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	IKBKE	HGNC	ENSG00000143466				123	0	0	59	21	26.25
LAMB3	0	genome.wustl.edu	37	1	209799111	209799111	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	209799111	209799111	G	T	SNP	LAMB3	ENST00000356082	human	ensembl	74_37	-1	known	missense	c.1858	p.L620M	0.959	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB3	HGNC	ENSG00000196878				123	0	0	76	28	26.9231
LAMB3	0	genome.wustl.edu	37	1	209800867	209800867	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	209800867	209800867	C	T	SNP	LAMB3	ENST00000356082	human	ensembl	74_37	-1	known	missense	c.1346	p.G449E	1.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB3	HGNC	ENSG00000196878				103	0	0	57	14	19.7183
CENPF	0	genome.wustl.edu	37	1	214830442	214830442	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	214830442	214830442	A	T	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	missense	c.8652	p.Q2884H	0.866	NULL	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724				159	1	0.625	175	88	33.4601
ECE1	0	genome.wustl.edu	37	1	21551931	21551931	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	21551931	21551931	G	A	SNP	ECE1	ENST00000374893	human	ensembl	74_37	-1	known	missense	c.1852	p.R618W	0.961	pfam_Peptidase_M13_C	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	ECE1	HGNC	ENSG00000117298				55	0	0	31	10	24.3902
RAP1GAP	0	genome.wustl.edu	37	1	21945544	21945544	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	21945544	21945544	G	A	SNP	RAP1GAP	ENST00000290101	human	ensembl	74_37	-1	known	missense	c.232	p.R78C	0.994	pfam_GoLoco_motif,smart_GoLoco_motif,pfscan_GoLoco_motif	pfam_Rap_GAP_dom,pfam_GoLoco_motif,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_Rap_GAP_dom	-	no_errors	RAP1GAP	HGNC	ENSG00000076864				19	0	0	1	2	66.6667
HSPG2	0	genome.wustl.edu	37	1	22155944	22155944	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	22155944	22155944	G	T	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.11924	p.P3975H	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				125	0	0	83	8	8.79121
HSPG2	0	genome.wustl.edu	37	1	22176578	22176578	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	22176578	22176578	C	T	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.7402	p.V2468I	0.900	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				333	0	0	193	96	33.218
CAPN2	0	genome.wustl.edu	37	1	223954100	223954100	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	223954100	223954100	C	T	SNP	CAPN2	ENST00000295006	human	ensembl	74_37	+1	known	silent	c.1722	p.I574	0.017	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN2	HGNC	ENSG00000162909				86	0	0	78	11	12.3596
WNT9A	0	genome.wustl.edu	37	1	228109556	228109556	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	228109556	228109556	C	T	SNP	WNT9A	ENST00000272164	human	ensembl	74_37	-1	known	missense	c.761	p.G254D	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt9a	-	no_errors	WNT9A	HGNC	ENSG00000143816				143	0	0	114	17	12.9771
EPHA8	0	genome.wustl.edu	37	1	22903024	22903024	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	22903024	22903024	C	T	SNP	EPHA8	ENST00000166244	human	ensembl	74_37	+1	known	silent	c.474	p.D158	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA8	HGNC	ENSG00000070886				104	0	0	57	29	33.7209
HEATR1	0	genome.wustl.edu	37	1	236749680	236749680	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	236749680	236749680	T	C	SNP	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	silent	c.1788	p.S596	0.016	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285				110	0	0	97	51	34.4595
WDR64	0	genome.wustl.edu	37	1	241904846	241904846	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	241904846	241904846	G	A	SNP	WDR64	ENST00000366552	human	ensembl	74_37	+1	known	silent	c.1320	p.L440	0.958	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR64	HGNC	ENSG00000162843				45	0	0	27	29	51.7857
AKT3	0	genome.wustl.edu	37	1	243777027	243777027	+	Silent	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	243777027	243777027	G	T	SNP	AKT3	ENST00000263826	human	ensembl	74_37	-1	known	silent	c.642	p.S214	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom	-	no_errors	AKT3	HGNC	ENSG00000117020				69	0	0	48	28	36.8421
OR2G3	0	genome.wustl.edu	37	1	247769130	247769130	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	247769130	247769130	C	T	SNP	OR2G3	ENST00000320002	human	ensembl	74_37	+1	known	silent	c.243	p.T81	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2G3	HGNC	ENSG00000177476				353	0	0	377	54	12.529
OR2G3	0	genome.wustl.edu	37	1	247769135	247769135	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	247769135	247769135	T	G	SNP	OR2G3	ENST00000320002	human	ensembl	74_37	+1	known	missense	c.248	p.V83G	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2G3	HGNC	ENSG00000177476				348	0	0	375	54	12.5874
OR2T6	0	genome.wustl.edu	37	1	248550954	248550954	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	248550954	248550954	G	A	SNP	OR2T6	ENST00000355728	human	ensembl	74_37	+1	known	missense	c.45	p.M15I	0.135	NULL	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR2T6	HGNC	ENSG00000198104				135	0	0	65	45	40.9091
TMEM57	0	genome.wustl.edu	37	1	25818035	25818035	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	25818035	25818035	C	T	SNP	TMEM57	ENST00000374343	human	ensembl	74_37	+1	known	silent	c.1752	p.S584	0.949	pfam_Macoilin	pfam_Macoilin,superfamily_Prefoldin	-	no_errors	TMEM57	HGNC	ENSG00000204178				76	0	0	48	20	29.4118
MTFR1L	0	genome.wustl.edu	37	1	26158526	26158526	+	RNA	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	26158526	26158526	A	G	SNP	MTFR1L	ENST00000469815	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.182	-	-	-	no_errors	MTFR1L	HGNC	ENSG00000117640				128	0	0	83	34	29.0598
PTPRU	0	genome.wustl.edu	37	1	29632103	29632103	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	29632103	29632103	A	G	SNP	PTPRU	ENST00000323874	human	ensembl	74_37	+1	known	missense	c.2836	p.T946A	0.001	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656				51	0	0	24	21	46.6667
GJB4	0	genome.wustl.edu	37	1	35227149	35227149	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	35227149	35227149	C	T	SNP	GJB4	ENST00000339480	human	ensembl	74_37	+1	known	silent	c.294	p.R98	0.000	pfam_Connexin_N	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin303	-	no_errors	GJB4	HGNC	ENSG00000189433				54	0	0	45	12	21.0526
WRAP73	0	genome.wustl.edu	37	1	3551767	3551767	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	3551767	3551767	C	T	SNP	WRAP73	ENST00000270708	human	ensembl	74_37	-1	known	missense	c.695	p.S232N	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WRAP73	HGNC	ENSG00000116213				93	0	0	52	9	14.7541
GRIK3	0	genome.wustl.edu	37	1	37270641	37270641	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	37270641	37270641	C	T	SNP	GRIK3	ENST00000373091	human	ensembl	74_37	-1	known	missense	c.2512	p.V838M	1.000	prints_NMDA_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873				117	0	0	61	23	27.381
HIVEP3	0	genome.wustl.edu	37	1	41976128	41976128	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	41976128	41976128	G	A	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	silent	c.7215	p.N2405	0.025	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				24	0	0	10	3	23.0769
ATP6V0B	0	genome.wustl.edu	37	1	44442008	44442008	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	44442008	44442008	G	A	SNP	ATP6V0B	ENST00000472174	human	ensembl	74_37	+1	known	missense	c.235	p.G79R	1.000	pfam_ATPase_proteolipid_c_like_dom,superfamily_ATPase_proteolipid_c_like_dom,prints_ATPase_proteolipid_csu	pfam_ATPase_proteolipid_c_like_dom,superfamily_ATPase_proteolipid_c_like_dom,prints_ATPase_proteolipid_csu	-	no_errors	ATP6V0B	HGNC	ENSG00000117410				71	0	0	45	23	33.8235
POMGNT1	0	genome.wustl.edu	37	1	46660558	46660558	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	46660558	46660558	G	T	SNP	POMGNT1	ENST00000371986	human	ensembl	74_37	-1	known	missense	c.610	p.L204M	0.998	NULL	pfam_Glyco_trans_13	-	no_errors	POMGNT1	HGNC	ENSG00000085998				358	1	0.278552	215	95	30.6452
CYP4X1	0	genome.wustl.edu	37	1	47489571	47489571	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	47489571	47489571	C	T	SNP	CYP4X1	ENST00000371901	human	ensembl	74_37	+1	known	nonsense	c.82	p.Q28*	0.884	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4X1	HGNC	ENSG00000186377				58	0	0	59	32	35.1648
FAM159A	0	genome.wustl.edu	37	1	53122577	53122577	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	53122577	53122577	C	T	SNP	FAM159A	ENST00000517870	human	ensembl	74_37	+1	known	silent	c.438	p.S146	0.013	NULL	NULL	-	no_errors	FAM159A	HGNC	ENSG00000182183				200	0	0	148	70	32.1101
ECHDC2	0	genome.wustl.edu	37	1	53370323	53370323	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	53370323	53370323	G	A	SNP	ECHDC2	ENST00000371522	human	ensembl	74_37	-1	known	missense	c.697	p.P233S	1.000	NULL	pfam_Crotonase_core_superfam	-	no_errors	ECHDC2	HGNC	ENSG00000121310				34	0	0	26	8	23.5294
ZZZ3	0	genome.wustl.edu	37	1	78098938	78098938	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	78098938	78098938	C	T	SNP	ZZZ3	ENST00000370801	human	ensembl	74_37	-1	known	silent	c.102	p.A34	1.000	NULL	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	ZZZ3	HGNC	ENSG00000036549				135	0	0	146	74	33.6364
RERE	0	genome.wustl.edu	37	1	8418331	8418331	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	8418331	8418331	C	T	SNP	RERE	ENST00000337907	human	ensembl	74_37	-1	known	missense	c.4264	p.V1422M	1.000	pfam_Atrophin-like	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599				74	0	0	28	21	42.8571
NOC2L	0	genome.wustl.edu	37	1	887854	887854	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	887854	887854	C	T	SNP	NOC2L	ENST00000327044	human	ensembl	74_37	-1	known	missense	c.1129	p.A377T	0.997	pfam_Noc2,superfamily_ARM-type_fold	pfam_Noc2,superfamily_ARM-type_fold	-	no_errors	NOC2L	HGNC	ENSG00000188976				93	0	0	37	14	27.451
KLHL17	0	genome.wustl.edu	37	1	899343	899343	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	899343	899343	G	A	SNP	KLHL17	ENST00000338591	human	ensembl	74_37	+1	known	missense	c.1399	p.A467T	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL17	HGNC	ENSG00000187961				288	1	0.346021	142	61	30.0493
BRDT	0	genome.wustl.edu	37	1	92445140	92445140	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	92445140	92445140	G	A	SNP	BRDT	ENST00000362005	human	ensembl	74_37	+1	known	silent	c.1113	p.T371	1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRDT	HGNC	ENSG00000137948				123	0	0	113	10	8.13008
MTF2	0	genome.wustl.edu	37	1	93602291	93602291	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	93602291	93602291	C	T	SNP	MTF2	ENST00000370298	human	ensembl	74_37	+1	known	missense	c.1489	p.R497W	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MTF2	HGNC	ENSG00000143033				140	0	0	113	47	29.375
PIK3CD	0	genome.wustl.edu	37	1	9784908	9784908	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	9784908	9784908	G	A	SNP	PIK3CD	ENST00000536656	human	ensembl	74_37	+1	known	missense	c.2983	p.G995R	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CD	HGNC	ENSG00000171608				158	0	0	69	38	35.514
AGRN	0	genome.wustl.edu	37	1	980540	980540	+	Splice_Site	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	980540	980540	G	T	SNP	AGRN	ENST00000379370	human	ensembl	74_37	+1	known	splice_site	c.2255-1	e13-1	0.036	-	-	-	no_errors	AGRN	HGNC	ENSG00000188157				51	0	0	39	5	11.3636
CNNM1	0	genome.wustl.edu	37	10	101089442	101089442	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	101089442	101089442	G	A	SNP	CNNM1	ENST00000356713	human	ensembl	74_37	+1	known	missense	c.298	p.G100S	0.053	NULL	pfam_DUF21,pfam_CBS_dom	-	no_errors	CNNM1	HGNC	ENSG00000119946				13	0	0	8	4	33.3333
GSTO2	0	genome.wustl.edu	37	10	106059034	106059034	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	106059034	106059034	C	T	SNP	GSTO2	ENST00000338595	human	ensembl	74_37	+1	known	silent	c.724	p.L242	0.995	NULL	pfam_Glutathione_S-Trfase_N,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_GST_omega	-	no_errors	GSTO2	HGNC	ENSG00000065621				164	0	0	146	16	9.87654
CDC123	0	genome.wustl.edu	37	10	12292485	12292485	+	RNA	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	12292485	12292485	A	G	SNP	CDC123	ENST00000498747	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CDC123	HGNC	ENSG00000151465				10	0	0	8	2	20
FGFR2	0	genome.wustl.edu	37	10	123244911	123244911	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	123244911	123244911	T	C	SNP	FGFR2	ENST00000457416	human	ensembl	74_37	-1	known	silent	c.2196	p.E732	0.970	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468				327	0	0	225	113	33.432
TACC2	0	genome.wustl.edu	37	10	123847368	123847368	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	123847368	123847368	A	G	SNP	TACC2	ENST00000334433	human	ensembl	74_37	+1	known	missense	c.5353	p.I1785V	0.000	NULL	pfam_TACC	-	no_errors	TACC2	HGNC	ENSG00000138162				76	0	0	67	6	8.21918
DMBT1	0	genome.wustl.edu	37	10	124337331	124337331	+	Silent	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	124337331	124337331	C	A	SNP	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	silent	c.612	p.A204	0.000	superfamily_Srcr_rcpt-rel	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908				126	0	0	82	33	28.6957
CPXM2	0	genome.wustl.edu	37	10	125601941	125601941	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	125601941	125601941	G	A	SNP	CPXM2	ENST00000241305	human	ensembl	74_37	-1	known	nonsense	c.577	p.Q193*	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	CPXM2	HGNC	ENSG00000121898				78	0	0	67	24	26.3736
DOCK1	0	genome.wustl.edu	37	10	128926004	128926004	+	Silent	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	128926004	128926004	C	A	SNP	DOCK1	ENST00000280333	human	ensembl	74_37	+1	known	silent	c.2760	p.S920	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c-like_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK1	HGNC	ENSG00000150760				45	0	0	28	21	42.8571
FAM196A	0	genome.wustl.edu	37	10	128974096	128974096	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	128974096	128974096	C	A	SNP	FAM196A	ENST00000522781	human	ensembl	74_37	-1	known	missense	c.564	p.L188F	0.000	NULL	NULL	-	no_errors	FAM196A	HGNC	ENSG00000188916				116	0	0	64	44	40.7407
OPTN	0	genome.wustl.edu	37	10	13169777	13169777	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	13169777	13169777	A	G	SNP	OPTN	ENST00000263036	human	ensembl	74_37	+1	known	silent	c.1275	p.E425	0.986	NULL	pfam_NEMO_N	-	no_errors	OPTN	HGNC	ENSG00000123240				129	0	0	106	16	13.1148
KNDC1	0	genome.wustl.edu	37	10	135020777	135020777	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	135020777	135020777	A	C	SNP	KNDC1	ENST00000368572	human	ensembl	74_37	+1	known	missense	c.3722	p.K1241T	0.997	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC	ENSG00000171798				82	0	0	45	29	39.1892
TUBGCP2	0	genome.wustl.edu	37	10	135102440	135102440	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	135102440	135102440	C	T	SNP	TUBGCP2	ENST00000543663	human	ensembl	74_37	-1	known	missense	c.1529	p.R510Q	1.000	pfam_TUBGCP,superfamily_Ocr	pfam_TUBGCP,superfamily_Ocr	-	no_errors	TUBGCP2	HGNC	ENSG00000130640				140	0	0	98	8	7.54717
VIM	0	genome.wustl.edu	37	10	17271880	17271880	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	17271880	17271880	G	A	SNP	VIM	ENST00000224237	human	ensembl	74_37	+1	known	silent	c.459	p.E153	1.000	pfam_IF	pfam_IF,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin	-	no_errors	VIM	HGNC	ENSG00000026025				22	0	0	10	7	41.1765
MLLT10	0	genome.wustl.edu	37	10	22022455	22022455	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	22022455	22022455	C	T	SNP	MLLT10	ENST00000307729	human	ensembl	74_37	+1	known	silent	c.2430	p.N810	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT10	HGNC	ENSG00000078403				11	0	0	10	5	33.3333
LRRC37A6P	0	genome.wustl.edu	37	10	27539297	27539297	+	RNA	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	27539297	27539297	A	G	SNP	LRRC37A6P	ENST00000284414	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.301	-	-	-	no_errors	LRRC37A6P	HGNC	ENSG00000230445				73	0	0	48	30	38.4615
PTCHD3	0	genome.wustl.edu	37	10	27702585	27702585	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	27702585	27702585	C	T	SNP	PTCHD3	ENST00000438700	human	ensembl	74_37	-1	known	missense	c.595	p.A199T	0.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077				207	0	0	182	13	6.66667
SVIL	0	genome.wustl.edu	37	10	29777649	29777649	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	29777649	29777649	G	A	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.4229	p.A1410V	1.000	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				37	0	0	15	5	25
SVIL	0	genome.wustl.edu	37	10	29821472	29821472	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	29821472	29821472	G	A	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	silent	c.1824	p.C608	0.979	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				49	0	0	33	8	19.5122
SVIL	0	genome.wustl.edu	37	10	29840037	29840037	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	29840037	29840037	C	T	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.316	p.A106T	1.000	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				240	0	0	142	65	31.401
MTPAP	0	genome.wustl.edu	37	10	30630507	30630507	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	30630507	30630507	C	T	SNP	MTPAP	ENST00000358107	human	ensembl	74_37	-1	known	missense	c.610	p.A204T	1.000	NULL	pfam_PAP_assoc	-	no_errors	MTPAP	HGNC	ENSG00000107951				90	0	0	73	24	24.7423
ZEB1	0	genome.wustl.edu	37	10	31791274	31791274	+	Splice_Site	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	31791274	31791274	A	G	SNP	ZEB1	ENST00000361642	human	ensembl	74_37	+1	known	splice_site	c.323-2	e4-2	1.000	-	-	-	no_errors	ZEB1	HGNC	ENSG00000148516				44	0	0	42	14	25
ITGB1	0	genome.wustl.edu	37	10	33214797	33214797	+	Splice_Site	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	33214797	33214797	A	G	SNP	ITGB1	ENST00000374956	human	ensembl	74_37	-1	known	splice_site	c.786+2	e5+2	1.000	-	-	-	no_errors	ITGB1	HGNC	ENSG00000150093				84	0	0	106	61	36.5269
ANKRD16	0	genome.wustl.edu	37	10	5920141	5920141	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	5920141	5920141	T	C	SNP	ANKRD16	ENST00000380092	human	ensembl	74_37	-1	known	silent	c.1038	p.P346	0.003	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD16	HGNC	ENSG00000134461				368	0	0	230	121	34.4729
ENSG00000197604	0	genome.wustl.edu	37	10	72195099	72195099	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	72195099	72195099	G	A	SNP	ENSG00000197604	ENST00000420338	human	ensembl	74_37	+1	novel	missense	c.46	p.A16T	0.990	NULL	NULL	-	no_errors	AC022532.1	Clone_based_ensembl_gene	ENSG00000197604				49	0	0	20	10	33.3333
PRF1	0	genome.wustl.edu	37	10	72358611	72358611	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	72358611	72358611	G	A	SNP	PRF1	ENST00000373209	human	ensembl	74_37	-1	known	missense	c.866	p.T289M	0.000	pfam_MACPF,smart_MACPF	pfam_MACPF,pfam_C2_dom,superfamily_C2_dom,smart_MACPF,smart_C2_dom,pfscan_C2_dom	-	no_errors	PRF1	HGNC	ENSG00000180644				171	0	0	97	38	28.1481
UNC5B	0	genome.wustl.edu	37	10	73046593	73046593	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	73046593	73046593	C	T	SNP	UNC5B	ENST00000335350	human	ensembl	74_37	+1	known	missense	c.700	p.R234C	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_ZU5,pfam_Ig_I-set,pfam_Death_domain,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5B	HGNC	ENSG00000107731				406	0	0	208	89	29.9663
SYNPO2L	0	genome.wustl.edu	37	10	75406786	75406786	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	75406786	75406786	G	T	SNP	SYNPO2L	ENST00000394810	human	ensembl	74_37	-1	known	missense	c.2624	p.A875D	0.005	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2L	HGNC	ENSG00000166317				284	0	0	244	21	7.92453
DLG5	0	genome.wustl.edu	37	10	79554615	79554615	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	79554615	79554615	C	A	SNP	DLG5	ENST00000372391	human	ensembl	74_37	-1	known	missense	c.5538	p.K1846N	0.934	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_PDZ,pfam_DUF622,pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_SH3_domain,superfamily_DEATH-like_dom,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_CARD,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG5	HGNC	ENSG00000151208				60	0	0	57	10	14.9254
LRIT2	0	genome.wustl.edu	37	10	85981859	85981859	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	85981859	85981859	G	A	SNP	LRIT2	ENST00000538192	human	ensembl	74_37	-1	known	silent	c.1500	p.C500	0.898	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIT2	HGNC	ENSG00000204033				97	0	0	81	40	33.0579
ENSG00000270002	0	genome.wustl.edu	37	10	87406758	87406758	+	RNA	SNP	C	C	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	87406758	87406758	C	G	SNP	ENSG00000270002	ENST00000474115	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	RP11-93H12.4	Clone_based_vega_gene	ENSG00000270002				12	0	0	6	5	45.4545
GRID1	0	genome.wustl.edu	37	10	87482810	87482810	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	87482810	87482810	T	C	SNP	GRID1	ENST00000327946	human	ensembl	74_37	-1	known	silent	c.1947	p.T649	0.003	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID1	HGNC	ENSG00000182771				38	0	0	23	8	25.8065
BTAF1	0	genome.wustl.edu	37	10	93784638	93784638	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	93784638	93784638	T	C	SNP	BTAF1	ENST00000265990	human	ensembl	74_37	+1	known	silent	c.4989	p.D1663	1.000	superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DUF3535,pfam_SNF2_N,pfam_HEAT,pfam_Helicase_C,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	BTAF1	HGNC	ENSG00000095564				142	0	0	125	63	33.5106
MYOF	0	genome.wustl.edu	37	10	95095752	95095752	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	95095752	95095752	A	G	SNP	MYOF	ENST00000359263	human	ensembl	74_37	-1	known	missense	c.4489	p.F1497L	1.000	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	MYOF	HGNC	ENSG00000138119				205	0	0	135	72	34.7826
MORN4	0	genome.wustl.edu	37	10	99377076	99377076	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	99377076	99377076	C	T	SNP	MORN4	ENST00000335628	human	ensembl	74_37	-1	known	missense	c.245	p.R82H	1.000	pfam_MORN	pfam_MORN,smart_MORN	-	no_errors	MORN4	HGNC	ENSG00000171160				108	0	0	70	46	39.6552
AMPD3	0	genome.wustl.edu	37	11	10483178	10483178	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	10483178	10483178	C	A	SNP	AMPD3	ENST00000396553	human	ensembl	74_37	+1	known	missense	c.112	p.L38M	0.942	pirsf_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD3	HGNC	ENSG00000133805				86	0	0	52	34	39.5349
LYVE1	0	genome.wustl.edu	37	11	10582327	10582327	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	10582327	10582327	T	C	SNP	LYVE1	ENST00000256178	human	ensembl	74_37	-1	known	missense	c.418	p.I140V	0.000	superfamily_C-type_lectin_fold	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link,prints_Link	-	no_errors	LYVE1	HGNC	ENSG00000133800				259	0	0	252	102	28.8136
NXPE2	0	genome.wustl.edu	37	11	114569334	114569334	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	114569334	114569334	A	G	SNP	NXPE2	ENST00000389586	human	ensembl	74_37	+1	known	missense	c.700	p.T234A	0.006	pfam_NXPH/NXPE	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE2	HGNC	ENSG00000204361				48	0	0	45	22	32.8358
CEP164	0	genome.wustl.edu	37	11	117261607	117261607	+	Silent	SNP	A	A	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	117261607	117261607	A	T	SNP	CEP164	ENST00000278935	human	ensembl	74_37	+1	known	silent	c.2049	p.A683	0.001	NULL	superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	CEP164	HGNC	ENSG00000110274				124	0	0	68	33	32.6733
AMICA1	0	genome.wustl.edu	37	11	118083204	118083204	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	118083204	118083204	A	G	SNP	AMICA1	ENST00000356289	human	ensembl	74_37	-1	known	missense	c.116	p.L39P	0.333	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	AMICA1	HGNC	ENSG00000160593				71	0	0	73	47	39.1667
KMT2A	0	genome.wustl.edu	37	11	118359351	118359351	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	118359351	118359351	G	T	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	missense	c.4355	p.C1452F	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pirsf_MeTrfase_trithorax,pfscan_Znf_PHD-finger	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058				105	0	0	74	35	32.1101
TECTA	0	genome.wustl.edu	37	11	120989148	120989148	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	120989148	120989148	A	C	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	missense	c.924	p.K308N	1.000	smart_VWC_out	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927				149	0	0	82	36	30.5085
TECTA	0	genome.wustl.edu	37	11	120996139	120996139	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	120996139	120996139	C	T	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	silent	c.1332	p.Y444	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927				782	1	0.127714	453	190	29.549
ZNF202	0	genome.wustl.edu	37	11	123601252	123601252	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	123601252	123601252	C	A	SNP	ZNF202	ENST00000336139	human	ensembl	74_37	-1	known	missense	c.345	p.E115D	1.000	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF202	HGNC	ENSG00000166261				215	0	0	133	50	27.3224
SLC37A2	0	genome.wustl.edu	37	11	124956241	124956241	+	RNA	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	124956241	124956241	T	C	SNP	SLC37A2	ENST00000525837	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SLC37A2	HGNC	ENSG00000134955				97	0	0	43	29	40.2778
SRPR	0	genome.wustl.edu	37	11	126135974	126135974	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	126135974	126135974	G	A	SNP	SRPR	ENST00000332118	human	ensembl	74_37	-1	known	missense	c.935	p.A312V	1.000	superfamily_Signal_recog_particl_SRP54_hlx	pfam_Sig_recog_particle_rcpt_asu_N,pfam_SRP54_GTPase_dom,pfam_ArgK,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_Signal_recog_particl_SRP54_hlx,superfamily_Longin-like_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom	-	no_errors	SRPR	HGNC	ENSG00000182934				323	1	0.308642	177	91	33.9552
GLB1L2	0	genome.wustl.edu	37	11	134241040	134241040	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	134241040	134241040	C	A	SNP	GLB1L2	ENST00000339772	human	ensembl	74_37	+1	known	missense	c.1354	p.Q452K	0.996	NULL	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,prints_Glycoside_Hdrlase_35	-	no_errors	GLB1L2	HGNC	ENSG00000149328				194	0	0	131	53	28.8043
ABCC8	0	genome.wustl.edu	37	11	17483306	17483306	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	17483306	17483306	G	A	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.646	p.R216C	0.999	prints_Sulphorea_rcpt	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071				147	0	0	91	50	35.461
MRGPRE	0	genome.wustl.edu	37	11	3249927	3249927	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	3249927	3249927	C	T	SNP	MRGPRE	ENST00000389832	human	ensembl	74_37	-1	known	missense	c.103	p.G35S	0.036	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRE	HGNC	ENSG00000184350				177	0	0	94	51	35.1724
ELF5	0	genome.wustl.edu	37	11	34502322	34502322	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	34502322	34502322	A	G	SNP	ELF5	ENST00000312319	human	ensembl	74_37	-1	known	missense	c.698	p.L233P	1.000	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELF5	HGNC	ENSG00000135374				171	0	0	150	19	11.2426
OR52B4	0	genome.wustl.edu	37	11	4389524	4389524	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	4389524	4389524	A	G	SNP	OR52B4	ENST00000408920	human	ensembl	74_37	-1	known	missense	c.2	p.M1T	0.919	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52B4	HGNC	ENSG00000221996				13	0	0	30	11	26.8293
NDUFS3	0	genome.wustl.edu	37	11	47602323	47602323	+	RNA	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	47602323	47602323	A	G	SNP	NDUFS3	ENST00000533507	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NDUFS3	HGNC	ENSG00000213619				125	0	0	55	42	43.299
OR4C46	0	genome.wustl.edu	37	11	51515361	51515361	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	51515361	51515361	T	C	SNP	OR4C46	ENST00000328188	human	ensembl	74_37	+1	known	missense	c.80	p.V27A	0.023	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C46	HGNC	ENSG00000185926				177	0	0	171	73	29.918
HBB	0	genome.wustl.edu	37	11	5248013	5248013	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	5248013	5248013	G	C	SNP	HBB	ENST00000335295	human	ensembl	74_37	-1	known	missense	c.109	p.P37A	1.000	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b	-	no_errors	HBB	HGNC	ENSG00000244734				90	0	0	59	33	35.8696
OR51I2	0	genome.wustl.edu	37	11	5475505	5475505	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	5475505	5475505	C	T	SNP	OR51I2	ENST00000341449	human	ensembl	74_37	+1	known	missense	c.787	p.R263C	0.960	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51I2	HGNC	ENSG00000187918				238	0	0	178	77	30.1961
OR5W2	0	genome.wustl.edu	37	11	55681941	55681941	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	55681941	55681941	A	G	SNP	OR5W2	ENST00000344514	human	ensembl	74_37	-1	known	missense	c.118	p.S40P	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5W2	HGNC	ENSG00000187612				79	0	0	63	20	24.0964
OR5W2	0	genome.wustl.edu	37	11	55681953	55681953	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	55681953	55681953	T	C	SNP	OR5W2	ENST00000344514	human	ensembl	74_37	-1	known	missense	c.106	p.I36V	0.433	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5W2	HGNC	ENSG00000187612				82	0	0	63	20	24.0964
OR9G1	0	genome.wustl.edu	37	11	56467894	56467894	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	56467894	56467894	T	C	SNP	OR9G1	ENST00000312153	human	ensembl	74_37	+1	known	missense	c.31	p.F11L	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9G1	HGNC	ENSG00000174914				59	0	0	116	7	5.69106
ZFP91	0	genome.wustl.edu	37	11	58378437	58378437	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	58378437	58378437	A	T	SNP	ZFP91	ENST00000316059	human	ensembl	74_37	+1	known	missense	c.632	p.E211V	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP91	HGNC	ENSG00000186660				55	0	0	49	21	30
PATL1	0	genome.wustl.edu	37	11	59416970	59416970	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	59416970	59416970	A	G	SNP	PATL1	ENST00000300146	human	ensembl	74_37	-1	known	silent	c.1698	p.Y566	1.000	pfam_Topo_II-assoc_PAT1	pfam_Topo_II-assoc_PAT1	-	no_errors	PATL1	HGNC	ENSG00000166889				40	0	0	27	26	49.0566
STX3	0	genome.wustl.edu	37	11	59564791	59564791	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	59564791	59564791	G	A	SNP	STX3	ENST00000337979	human	ensembl	74_37	+1	known	silent	c.822	p.L274	1.000	NULL	pfam_Syntaxin_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX3	HGNC	ENSG00000166900				153	1	0.649351	128	47	26.8571
INCENP	0	genome.wustl.edu	37	11	61917561	61917561	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	61917561	61917561	G	A	SNP	INCENP	ENST00000394818	human	ensembl	74_37	+1	known	silent	c.2424	p.P808	0.563	NULL	pfam_INCENP_N,pfam_Inner_centromere_prot_ARK-bd	-	no_errors	INCENP	HGNC	ENSG00000149503				126	1	0.787402	76	32	29.6296
BSCL2	0	genome.wustl.edu	37	11	62473007	62473007	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	62473007	62473007	G	A	SNP	BSCL2	ENST00000360796	human	ensembl	74_37	-1	known	missense	c.170	p.A57V	0.206	NULL	pfam_Adipose-reg_protein_Seipin	-	no_errors	BSCL2	HGNC	ENSG00000168000				42	0	0	21	13	38.2353
PYGM	0	genome.wustl.edu	37	11	64525753	64525753	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	64525753	64525753	C	A	SNP	PYGM	ENST00000164139	human	ensembl	74_37	-1	known	missense	c.493	p.G165W	1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGM	HGNC	ENSG00000068976				265	0	0	139	70	33.4928
LTBP3	0	genome.wustl.edu	37	11	65321785	65321785	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	65321785	65321785	G	A	SNP	LTBP3	ENST00000301873	human	ensembl	74_37	-1	known	missense	c.398	p.P133L	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056				31	0	0	19	11	36.6667
AP5B1	0	genome.wustl.edu	37	11	65547034	65547034	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	65547034	65547034	C	T	SNP	AP5B1	ENST00000532090	human	ensembl	74_37	-1	novel	silent	c.930	p.P310	0.227	NULL	NULL	-	no_errors	AP5B1	HGNC	ENSG00000254470				31	0	0	18	11	37.931
ILK	0	genome.wustl.edu	37	11	6630183	6630183	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	6630183	6630183	A	G	SNP	ILK	ENST00000299421	human	ensembl	74_37	+1	known	missense	c.517	p.T173A	1.000	superfamily_Kinase-like_dom,pirsf_Integrin-linked_kinase	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ankyrin_rpt,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Integrin-linked_kinase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ILK	HGNC	ENSG00000166333				219	1	0.454545	134	41	23.4286
TCIRG1	0	genome.wustl.edu	37	11	67818098	67818098	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	67818098	67818098	T	G	SNP	TCIRG1	ENST00000265686	human	ensembl	74_37	+1	known	missense	c.2381	p.L794R	1.000	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	TCIRG1	HGNC	ENSG00000110719				175	0	0	108	19	14.9606
OR10A4	0	genome.wustl.edu	37	11	6898607	6898607	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	6898607	6898607	C	T	SNP	OR10A4	ENST00000379829	human	ensembl	74_37	+1	known	silent	c.729	p.S243	0.980	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A4	HGNC	ENSG00000170782				113	0	0	84	55	39.5683
P2RY6	0	genome.wustl.edu	37	11	73007624	73007624	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	73007624	73007624	C	T	SNP	P2RY6	ENST00000349767	human	ensembl	74_37	+1	known	missense	c.61	p.R21C	0.411	prints_Protea_act_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y6_rcpt,prints_GPCR_Rhodpsn,prints_P2Y3_rcpt,prints_Protea_act_rcpt	-	no_errors	P2RY6	HGNC	ENSG00000171631				348	0	0	157	112	41.6357
PRDM4	0	genome.wustl.edu	37	12	108147777	108147777	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	108147777	108147777	T	C	SNP	PRDM4	ENST00000228437	human	ensembl	74_37	-1	known	silent	c.255	p.L85	0.988	pirsf_Znf_PRDM4	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_Znf_PRDM4,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM4	HGNC	ENSG00000110851				138	0	0	74	48	39.3443
CIT	0	genome.wustl.edu	37	12	120208708	120208708	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	120208708	120208708	G	A	SNP	CIT	ENST00000392521	human	ensembl	74_37	-1	novel	missense	c.2089	p.R697C	1.000	pirsf_Citron_Rho-interacting_kinase,prints_Tropomyosin	pirsf_Citron_Rho-interacting_kinase,pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,prints_Tropomyosin,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CIT	HGNC	ENSG00000122966				115	0	0	90	13	12.6214
PITPNM2	0	genome.wustl.edu	37	12	123490022	123490022	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	123490022	123490022	C	A	SNP	PITPNM2	ENST00000320201	human	ensembl	74_37	-1	known	missense	c.717	p.M239I	1.000	pfam_PI_transfer	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM2	HGNC	ENSG00000090975				312	0	0	195	33	14.4737
TCTN2	0	genome.wustl.edu	37	12	124155800	124155800	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	124155800	124155800	C	T	SNP	TCTN2	ENST00000303372	human	ensembl	74_37	+1	known	missense	c.13	p.P5S	0.003	NULL	pfam_DUF1619	-	no_errors	TCTN2	HGNC	ENSG00000168778				43	0	0	14	9	39.1304
DNAH10	0	genome.wustl.edu	37	12	124265777	124265777	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	124265777	124265777	C	T	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.589	p.R197W	0.814	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653				368	0	0	256	126	32.9843
MANSC1	0	genome.wustl.edu	37	12	12491412	12491412	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	12491412	12491412	G	A	SNP	MANSC1	ENST00000535902	human	ensembl	74_37	-1	known	silent	c.306	p.N102	0.868	pfam_MANSC_N,smart_MANSC_N,pfscan_MANSC	pfam_MANSC_N,smart_MANSC_N,pfscan_MANSC	-	no_errors	MANSC1	HGNC	ENSG00000111261				198	0	0	138	78	36.1111
TMEM132D	0	genome.wustl.edu	37	12	129559011	129559011	+	Silent	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	129559011	129559011	C	A	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	silent	c.2709	p.G903	0.001	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952				153	0	0	103	51	33.1169
TMEM132D	0	genome.wustl.edu	37	12	129559436	129559436	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	129559436	129559436	C	A	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	nonsense	c.2284	p.G762*	1.000	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952				172	0	0	98	30	23.4375
RIMBP2	0	genome.wustl.edu	37	12	130884319	130884319	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	130884319	130884319	A	T	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	missense	c.3037	p.F1013I	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709				115	0	0	92	5	5.15464
RIMBP2	0	genome.wustl.edu	37	12	130898840	130898840	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	130898840	130898840	G	A	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	nonsense	c.2482	p.R828*	0.985	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709				92	0	0	57	4	6.55738
EP400	0	genome.wustl.edu	37	12	132464315	132464315	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	132464315	132464315	C	T	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	missense	c.1520	p.A507V	0.187	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				49	0	0	22	9	29.0323
EP400	0	genome.wustl.edu	37	12	132511986	132511986	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	132511986	132511986	C	T	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	silent	c.5127	p.G1709	0.997	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				100	0	0	39	19	32.7586
SLCO1B3	0	genome.wustl.edu	37	12	21229503	21229503	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	21229503	21229503	G	T	SNP	SLCO1B3	ENST00000553473	human	ensembl	74_37	+1	known	missense	c.2048	p.G683V	0.998	superfamily_MFS_dom_general_subst_transpt	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B3	HGNC	ENSG00000111700				84	0	0	119	59	33.1461
LINC00477	0	genome.wustl.edu	37	12	24736450	24736450	+	RNA	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	24736450	24736450	A	G	SNP	LINC00477	ENST00000483544	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	LINC00477	HGNC	ENSG00000197503				53	0	0	35	8	18.6047
HDAC7	0	genome.wustl.edu	37	12	48183343	48183343	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	48183343	48183343	G	A	SNP	HDAC7	ENST00000380610	human	ensembl	74_37	-1	known	missense	c.2161	p.R721W	0.997	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC7	HGNC	ENSG00000061273				56	0	0	54	5	8.47458
GPD1	0	genome.wustl.edu	37	12	50499353	50499353	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	50499353	50499353	A	G	SNP	GPD1	ENST00000301149	human	ensembl	74_37	+1	known	missense	c.242	p.Q81R	1.000	pfam_G3P_DH_NAD-dep_N,pirsf_G3P_DH_NAD-dep,prints_G3P_DH_NAD-dep,tigrfam_G3P_DH_NAD-dep_euk	pfam_G3P_DH_NAD-dep_N,pfam_G3P_DH_NAD-dep_C,superfamily_6-PGluconate_DH_C-like,pirsf_G3P_DH_NAD-dep,prints_G3P_DH_NAD-dep,tigrfam_G3P_DH_NAD-dep_euk	-	no_errors	GPD1	HGNC	ENSG00000167588				96	0	0	53	17	24.2857
KRT73	0	genome.wustl.edu	37	12	53004555	53004555	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	53004555	53004555	G	A	SNP	KRT73	ENST00000305748	human	ensembl	74_37	-1	known	missense	c.1175	p.A392V	1.000	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT73	HGNC	ENSG00000186049				85	0	0	51	26	33.7662
KRT8	0	genome.wustl.edu	37	12	53298482	53298482	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	53298482	53298482	A	T	SNP	KRT8	ENST00000293308	human	ensembl	74_37	-1	known	missense	c.284	p.I95N	1.000	pfam_IF,prints_Keratin_II	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT8	HGNC	ENSG00000170421				213	0	0	105	55	34.375
ERBB3	0	genome.wustl.edu	37	12	56482560	56482560	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	56482560	56482560	C	T	SNP	ERBB3	ENST00000267101	human	ensembl	74_37	+1	known	silent	c.1017	p.R339	0.992	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Furin-like_Cys-rich_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB3	HGNC	ENSG00000065361				196	0	0	139	81	36.8182
ANKRD52	0	genome.wustl.edu	37	12	56642004	56642004	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	56642004	56642004	T	C	SNP	ANKRD52	ENST00000267116	human	ensembl	74_37	-1	known	missense	c.1781	p.Y594C	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD52	HGNC	ENSG00000139645				171	0	0	126	11	8.0292
BAZ2A	0	genome.wustl.edu	37	12	56994529	56994529	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	56994529	56994529	A	G	SNP	BAZ2A	ENST00000551812	human	ensembl	74_37	-1	known	missense	c.4544	p.L1515P	0.999	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,smart_Methyl_CpG_DNA-bd,smart_AT_hook_DNA-bd_motif,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2A	HGNC	ENSG00000076108				289	0	0	184	70	27.5591
GLI1	0	genome.wustl.edu	37	12	57858512	57858512	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	57858512	57858512	T	C	SNP	GLI1	ENST00000228682	human	ensembl	74_37	+1	known	missense	c.250	p.S84P	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI1	HGNC	ENSG00000111087				94	0	0	42	25	37.3134
AVIL	0	genome.wustl.edu	37	12	58209783	58209783	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	58209783	58209783	G	A	SNP	AVIL	ENST00000257861	human	ensembl	74_37	-1	known	missense	c.41	p.P14L	0.994	smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	AVIL	HGNC	ENSG00000135407				66	0	0	42	22	34.375
CD27	0	genome.wustl.edu	37	12	6554270	6554270	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	6554270	6554270	G	A	SNP	CD27	ENST00000266557	human	ensembl	74_37	+1	known	silent	c.9	p.R3	0.013	prints_TNFR_7	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_7,prints_Fas_rcpt	-	no_errors	CD27	HGNC	ENSG00000139193				19	0	0	14	5	26.3158
CHD4	0	genome.wustl.edu	37	12	6697051	6697051	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	6697051	6697051	C	T	SNP	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	missense	c.3530	p.R1177H	0.994	pfam_HDA_complex_subunit-2/3,superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642				112	0	0	77	38	33.0435
NUP107	0	genome.wustl.edu	37	12	69109437	69109437	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	69109437	69109437	C	T	SNP	NUP107	ENST00000229179	human	ensembl	74_37	+1	known	missense	c.1000	p.P334S	1.000	pfam_Nup84_Nup100	pfam_Nup84_Nup100	-	no_errors	NUP107	HGNC	ENSG00000111581				215	1	0.462963	133	50	27.3224
PTPRR	0	genome.wustl.edu	37	12	71094956	71094956	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	71094956	71094956	G	A	SNP	PTPRR	ENST00000283228	human	ensembl	74_37	-1	known	silent	c.1155	p.D385	1.000	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRR	HGNC	ENSG00000153233				40	0	0	116	58	33.3333
TRHDE	0	genome.wustl.edu	37	12	72666574	72666574	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	72666574	72666574	G	A	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.16	p.A6T	0.996	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657				16	0	0	11	5	31.25
PPFIA2	0	genome.wustl.edu	37	12	81657028	81657028	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	81657028	81657028	T	C	SNP	PPFIA2	ENST00000549396	human	ensembl	74_37	-1	known	missense	c.3697	p.R1233G	0.988	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA2	HGNC	ENSG00000139220				11	0	0	15	3	16.6667
CD69	0	genome.wustl.edu	37	12	9907700	9907700	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	9907700	9907700	T	C	SNP	CD69	ENST00000228434	human	ensembl	74_37	-1	known	silent	c.345	p.E115	0.037	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CD69	HGNC	ENSG00000110848				110	0	0	97	48	33.1034
TNFRSF19	0	genome.wustl.edu	37	13	24233283	24233283	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	24233283	24233283	C	T	SNP	TNFRSF19	ENST00000382258	human	ensembl	74_37	+1	known	silent	c.540	p.T180	0.127	NULL	smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_19	-	no_errors	TNFRSF19	HGNC	ENSG00000127863				107	0	0	46	29	38.6667
STARD13	0	genome.wustl.edu	37	13	33704065	33704065	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	33704065	33704065	T	G	SNP	STARD13	ENST00000336934	human	ensembl	74_37	-1	known	missense	c.749	p.K250T	1.000	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	STARD13	HGNC	ENSG00000133121				164	0	0	86	45	34.3511
CCDC169-SOHLH2	0	genome.wustl.edu	37	13	36748962	36748962	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	36748962	36748962	G	A	SNP	CCDC169-SOHLH2	ENST00000511166	human	ensembl	74_37	-1	known	missense	c.917	p.P306L	0.952	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	CCDC169-SOHLH2	HGNC	ENSG00000250709				116	0	0	93	25	21.1864
CCNA1	0	genome.wustl.edu	37	13	37012966	37012966	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	37012966	37012966	A	G	SNP	CCNA1	ENST00000255465	human	ensembl	74_37	+1	known	silent	c.855	p.K285	1.000	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNA1	HGNC	ENSG00000133101				176	0	0	140	45	24.3243
DGKH	0	genome.wustl.edu	37	13	42701682	42701682	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	42701682	42701682	C	T	SNP	DGKH	ENST00000337343	human	ensembl	74_37	+1	known	silent	c.276	p.R92	0.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKH	HGNC	ENSG00000102780				38	0	0	34	22	39.2857
CCDC122	0	genome.wustl.edu	37	13	44434049	44434049	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	44434049	44434049	A	G	SNP	CCDC122	ENST00000281508	human	ensembl	74_37	-1	known	missense	c.314	p.V105A	0.994	NULL	NULL	-	no_errors	CCDC122	HGNC	ENSG00000151773				69	0	0	79	38	32.4786
PCDH9	0	genome.wustl.edu	37	13	67801050	67801050	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	67801050	67801050	A	G	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	missense	c.1523	p.L508P	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226				162	0	0	144	70	32.7103
LMO7	0	genome.wustl.edu	37	13	76432182	76432182	+	RNA	SNP	T	T	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	76432182	76432182	T	A	SNP	LMO7	ENST00000605961	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.669	-	-	-	no_errors	LMO7	HGNC	ENSG00000136153				34	0	0	19	17	47.2222
POU4F1	0	genome.wustl.edu	37	13	79175974	79175974	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	79175974	79175974	C	T	SNP	POU4F1	ENST00000377208	human	ensembl	74_37	-1	known	missense	c.836	p.R279H	1.000	pfam_POU_specific,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,pfscan_POU_specific,prints_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F1	HGNC	ENSG00000152192				29	0	0	12	10	45.4545
SLITRK5	0	genome.wustl.edu	37	13	88328786	88328786	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	88328786	88328786	C	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.1143	p.N381K	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				94	0	0	54	26	32.5
GPC5	0	genome.wustl.edu	37	13	92101092	92101092	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	92101092	92101092	G	A	SNP	GPC5	ENST00000377067	human	ensembl	74_37	+1	known	missense	c.241	p.A81T	0.757	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC	ENSG00000179399				51	0	0	145	12	7.64331
ABCC4	0	genome.wustl.edu	37	13	95840745	95840745	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	95840745	95840745	C	T	SNP	ABCC4	ENST00000376887	human	ensembl	74_37	-1	known	missense	c.1315	p.E439K	0.982	superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257				119	0	0	81	40	33.0579
FARP1	0	genome.wustl.edu	37	13	99037041	99037041	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	99037041	99037041	A	G	SNP	FARP1	ENST00000376586	human	ensembl	74_37	+1	known	missense	c.554	p.Y185C	1.000	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM-adjacent,pfam_FERM_central,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP1	HGNC	ENSG00000152767				108	0	0	93	12	11.4286
PARP2	0	genome.wustl.edu	37	14	20818769	20818769	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	20818769	20818769	A	G	SNP	PARP2	ENST00000250416	human	ensembl	74_37	+1	known	missense	c.448	p.R150G	1.000	pfam_WGR_domain,superfamily_WGR_domain,smart_WGR_domain	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_WGR_domain,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,smart_WGR_domain,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP2	HGNC	ENSG00000129484				126	0	0	72	45	38.4615
PNP	0	genome.wustl.edu	37	14	20942680	20942680	+	Silent	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	20942680	20942680	C	A	SNP	PNP	ENST00000361505	human	ensembl	74_37	+1	known	silent	c.231	p.A77	0.199	pfam_Nucleoside_phosphorylase_d,tigrfam_Pur_Nuc_Pase_Ino/Guo-sp,tigrfam_Purine_phosphorylase	pfam_Nucleoside_phosphorylase_d,tigrfam_Pur_Nuc_Pase_Ino/Guo-sp,tigrfam_Purine_phosphorylase	-	no_errors	PNP	HGNC	ENSG00000198805				109	0	0	62	23	27.0588
EFS	0	genome.wustl.edu	37	14	23829429	23829429	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	23829429	23829429	C	A	SNP	EFS	ENST00000216733	human	ensembl	74_37	-1	known	missense	c.359	p.C120F	0.950	NULL	pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	EFS	HGNC	ENSG00000100842				157	0	0	100	46	31.5068
NPAS3	0	genome.wustl.edu	37	14	34269602	34269602	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	34269602	34269602	G	A	SNP	NPAS3	ENST00000356141	human	ensembl	74_37	+1	known	missense	c.2089	p.G697S	0.736	NULL	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS3	HGNC	ENSG00000151322				83	0	0	40	36	47.3684
SSTR1	0	genome.wustl.edu	37	14	38679277	38679277	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	38679277	38679277	T	C	SNP	SSTR1	ENST00000267377	human	ensembl	74_37	+1	known	missense	c.683	p.F228S	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Neuropept_B/W_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_1,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt,prints_Neuropept_B/W_rcpt	-	no_errors	SSTR1	HGNC	ENSG00000139874				74	0	0	51	18	26.087
MGAT2	0	genome.wustl.edu	37	14	50088621	50088621	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	50088621	50088621	A	G	SNP	MGAT2	ENST00000305386	human	ensembl	74_37	+1	known	missense	c.635	p.N212S	1.000	pfam_GlcNAc_II	pfam_GlcNAc_II	-	no_errors	MGAT2	HGNC	ENSG00000168282				247	0	0	117	64	35.3591
ZFYVE26	0	genome.wustl.edu	37	14	68238816	68238816	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	68238816	68238816	G	A	SNP	ZFYVE26	ENST00000347230	human	ensembl	74_37	-1	known	missense	c.5432	p.P1811L	0.997	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE26	HGNC	ENSG00000072121				31	0	0	25	8	24.2424
AHSA1	0	genome.wustl.edu	37	14	77935519	77935519	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	77935519	77935519	C	T	SNP	AHSA1	ENST00000216479	human	ensembl	74_37	+1	known	missense	c.944	p.T315M	1.000	pfam_Activator_of_Hsp90_ATPase	pfam_AHSA1_N,pfam_Activator_of_Hsp90_ATPase,superfamily_AHSA1_N	-	no_errors	AHSA1	HGNC	ENSG00000100591				385	1	0.259067	196	85	30.2491
UNC79	0	genome.wustl.edu	37	14	93954017	93954017	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	93954017	93954017	T	C	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	missense	c.628	p.S210P	0.981	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				108	0	0	84	44	34.375
C14orf177	0	genome.wustl.edu	37	14	99182697	99182697	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	99182697	99182697	G	A	SNP	C14orf177	ENST00000325812	human	ensembl	74_37	+1	known	missense	c.169	p.A57T	0.000	NULL	NULL	-	no_errors	C14orf177	HGNC	ENSG00000176605				45	0	0	25	8	24.2424
GABRG3	0	genome.wustl.edu	37	15	27725940	27725940	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	27725940	27725940	A	C	SNP	GABRG3	ENST00000555083	human	ensembl	74_37	+1	putative	missense	c.719	p.N240T	0.007	superfamily_Neur_chan_lig-bd	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_GABBAg_rcpt,prints_Neur_channel,prints_GABAAa_rcpt	-	no_errors	GABRG3	HGNC	ENSG00000182256				25	0	0	13	7	35
HERC2	0	genome.wustl.edu	37	15	28473458	28473458	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	28473458	28473458	G	A	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	silent	c.5370	p.L1790	0.954	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				70	0	0	36	21	36.8421
CHRNA7	0	genome.wustl.edu	37	15	32460285	32460285	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	32460285	32460285	G	A	SNP	CHRNA7	ENST00000454250	human	ensembl	74_37	+1	known	missense	c.1222	p.A408T	0.028	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA7	HGNC	ENSG00000175344				49	0	0	34	20	37.037
FMN1	0	genome.wustl.edu	37	15	33359423	33359423	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	33359423	33359423	G	A	SNP	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	silent	c.663	p.N221	0.000	NULL	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905				81	0	0	60	33	35.4839
FAM98B	0	genome.wustl.edu	37	15	38773701	38773701	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	38773701	38773701	T	C	SNP	FAM98B	ENST00000491535	human	ensembl	74_37	+1	known	missense	c.938	p.I313T	0.004	NULL	pfam_Uncharacterised_FAM98	-	no_errors	FAM98B	HGNC	ENSG00000171262				56	0	0	40	20	33.3333
PLA2G4D	0	genome.wustl.edu	37	15	42371822	42371822	+	Silent	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	42371822	42371822	C	A	SNP	PLA2G4D	ENST00000290472	human	ensembl	74_37	-1	known	silent	c.1230	p.R410	0.472	pfam_LysoPLipase_cat_dom,superfamily_Acyl_Trfase/lysoPLipase,smart_LysoPLipase_cat_dom,pfscan_LysoPLipase_cat_dom	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4D	HGNC	ENSG00000159337				57	0	0	36	15	29.4118
LIPC	0	genome.wustl.edu	37	15	58838067	58838067	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	58838067	58838067	T	C	SNP	LIPC	ENST00000299022	human	ensembl	74_37	+1	known	missense	c.701	p.I234T	1.000	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH,prints_Lipo_Lipase	pfam_Lipase_N,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pirsf_Lipoprotein_lipase_LIPH,pfscan_PLAT/LH2_dom,prints_Lipase_hep,prints_Lipase,prints_Lipo_Lipase	-	no_errors	LIPC	HGNC	ENSG00000166035				160	0	0	148	12	7.5
RAB8B	0	genome.wustl.edu	37	15	63551864	63551864	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	63551864	63551864	C	T	SNP	RAB8B	ENST00000321437	human	ensembl	74_37	+1	known	silent	c.453	p.S151	0.993	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB8B	HGNC	ENSG00000166128				85	0	0	52	16	23.5294
CLPX	0	genome.wustl.edu	37	15	65450095	65450095	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	65450095	65450095	T	G	SNP	CLPX	ENST00000300107	human	ensembl	74_37	-1	known	missense	c.1046	p.K349T	1.000	pfam_ATPase_AAA-2,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_Sigma_54_int,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_Clp_protease_ATP-bd_su_ClpX	pfam_ATPase_AAA-2,pfam_Clp_ATPase_C,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_Sigma_54_int,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_Clp_protease_ATP-bd_su_ClpX	-	no_errors	CLPX	HGNC	ENSG00000166855				205	0	0	232	15	6.07287
PARP16	0	genome.wustl.edu	37	15	65551732	65551732	+	RNA	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	65551732	65551732	A	G	SNP	PARP16	ENST00000560149	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PARP16	HGNC	ENSG00000138617				457	0	0	296	105	26.1845
MAN2C1	0	genome.wustl.edu	37	15	75651071	75651071	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	75651071	75651071	G	A	SNP	MAN2C1	ENST00000267978	human	ensembl	74_37	-1	known	silent	c.2220	p.D740	0.613	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2C1	HGNC	ENSG00000140400				50	0	0	26	14	35
BNC1	0	genome.wustl.edu	37	15	83935708	83935708	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	83935708	83935708	G	A	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	silent	c.315	p.P105	0.274	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594				113	0	0	66	38	36.5385
ZSCAN2	0	genome.wustl.edu	37	15	85165031	85165031	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	85165031	85165031	C	T	SNP	ZSCAN2	ENST00000448803	human	ensembl	74_37	+1	known	silent	c.1605	p.C535	0.746	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN2	HGNC	ENSG00000176371				262	1	0.380228	142	71	33.3333
MRPS11	0	genome.wustl.edu	37	15	89010975	89010975	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	89010975	89010975	G	A	SNP	MRPS11	ENST00000325844	human	ensembl	74_37	+1	known	silent	c.27	p.S9	0.000	NULL	pfam_Ribosomal_S11	-	no_errors	MRPS11	HGNC	ENSG00000181991				86	0	0	62	5	7.46269
IQGAP1	0	genome.wustl.edu	37	15	91037956	91037956	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	91037956	91037956	A	G	SNP	IQGAP1	ENST00000268182	human	ensembl	74_37	+1	known	missense	c.4640	p.K1547R	1.000	pfam_RasGAP_C	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,pfam_WW_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_WW_dom,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP1	HGNC	ENSG00000140575				128	0	0	101	15	12.931
RGMA	0	genome.wustl.edu	37	15	93588281	93588281	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	93588281	93588281	G	C	SNP	RGMA	ENST00000329082	human	ensembl	74_37	-1	known	missense	c.1300	p.P434A	0.000	NULL	pfam_RGM_N,pfam_RGM_C	-	no_errors	RGMA	HGNC	ENSG00000182175				9	0	0	6	10	62.5
SYNM	0	genome.wustl.edu	37	15	99672605	99672605	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	99672605	99672605	G	A	SNP	SYNM	ENST00000336292	human	ensembl	74_37	+1	known	missense	c.4037	p.G1346D	0.006	NULL	pfam_IF	-	no_errors	SYNM	HGNC	ENSG00000182253				164	0	0	79	45	36.2903
MPG	0	genome.wustl.edu	37	16	135493	135493	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	135493	135493	C	A	SNP	MPG	ENST00000219431	human	ensembl	74_37	+1	known	missense	c.614	p.A205D	0.004	pfam_PurDNA_glycsylse,superfamily_Formyl_transferase_C-like,tigrfam_PurDNA_glycsylse	pfam_PurDNA_glycsylse,superfamily_Formyl_transferase_C-like,tigrfam_PurDNA_glycsylse	-	no_errors	MPG	HGNC	ENSG00000103152				167	0	0	81	32	28.3186
MPG	0	genome.wustl.edu	37	16	135720	135720	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	135720	135720	G	T	SNP	MPG	ENST00000219431	human	ensembl	74_37	+1	known	missense	c.841	p.G281C	1.000	pfam_PurDNA_glycsylse,superfamily_Formyl_transferase_C-like,tigrfam_PurDNA_glycsylse	pfam_PurDNA_glycsylse,superfamily_Formyl_transferase_C-like,tigrfam_PurDNA_glycsylse	-	no_errors	MPG	HGNC	ENSG00000103152				36	0	0	25	9	26.4706
TMEM204	0	genome.wustl.edu	37	16	1584349	1584349	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	1584349	1584349	G	A	SNP	TMEM204	ENST00000253934	human	ensembl	74_37	+1	known	missense	c.73	p.A25T	0.998	NULL	NULL	-	no_errors	TMEM204	HGNC	ENSG00000131634				122	0	0	85	27	24.1071
IFT140	0	genome.wustl.edu	37	16	1652483	1652483	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	1652483	1652483	G	A	SNP	IFT140	ENST00000426508	human	ensembl	74_37	-1	known	missense	c.257	p.T86M	0.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535				101	0	0	92	7	7.07071
MAPK8IP3	0	genome.wustl.edu	37	16	1817877	1817877	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	1817877	1817877	G	T	SNP	MAPK8IP3	ENST00000250894	human	ensembl	74_37	+1	known	missense	c.3478	p.G1160C	1.000	superfamily_WD40_repeat_dom	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	MAPK8IP3	HGNC	ENSG00000138834				233	0	0	123	52	29.7143
C16orf62	0	genome.wustl.edu	37	16	19567040	19567040	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	19567040	19567040	G	A	SNP	C16orf62	ENST00000438132	human	ensembl	74_37	+1	known	missense	c.256	p.V86M	1.000	NULL	NULL	-	no_errors	C16orf62	HGNC	ENSG00000103544				58	0	0	47	6	11.3208
ANKS4B	0	genome.wustl.edu	37	16	21261872	21261872	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	21261872	21261872	C	T	SNP	ANKS4B	ENST00000311620	human	ensembl	74_37	+1	known	silent	c.985	p.L329	0.021	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKS4B	HGNC	ENSG00000175311				63	0	0	44	26	37.1429
TSC2	0	genome.wustl.edu	37	16	2133710	2133710	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	2133710	2133710	A	G	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.3898	p.M1300V	0.973	NULL	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197				15	0	0	6	2	25
PKD1	0	genome.wustl.edu	37	16	2164260	2164260	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	2164260	2164260	G	T	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.2764	p.L922I	1.000	tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710				52	0	0	20	14	41.1765
TRAF7	0	genome.wustl.edu	37	16	2225603	2225603	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	2225603	2225603	G	A	SNP	TRAF7	ENST00000326181	human	ensembl	74_37	+1	known	missense	c.1606	p.G536S	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_TRAF-like,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_Znf_TRAF,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TRAF7	HGNC	ENSG00000131653				111	0	0	71	8	10.1266
CACNG3	0	genome.wustl.edu	37	16	24372865	24372865	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	24372865	24372865	A	C	SNP	CACNG3	ENST00000005284	human	ensembl	74_37	+1	known	missense	c.629	p.K210T	0.992	NULL	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	-	no_errors	CACNG3	HGNC	ENSG00000006116				204	0	0	162	31	16.0622
ZKSCAN2	0	genome.wustl.edu	37	16	25251408	25251408	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	25251408	25251408	C	T	SNP	ZKSCAN2	ENST00000328086	human	ensembl	74_37	-1	known	missense	c.2633	p.R878Q	0.607	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN2	HGNC	ENSG00000155592				123	0	0	80	46	36.5079
ATXN2L	0	genome.wustl.edu	37	16	28837682	28837682	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	28837682	28837682	G	A	SNP	ATXN2L	ENST00000395547	human	ensembl	74_37	+1	known	missense	c.587	p.R196Q	1.000	superfamily_LSM_dom	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2L	HGNC	ENSG00000168488				161	0	0	101	44	30.3448
NFATC2IP	0	genome.wustl.edu	37	16	28970422	28970422	+	Splice_Site	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	28970422	28970422	G	C	SNP	NFATC2IP	ENST00000320805	human	ensembl	74_37	+1	known	splice_site	c.1101+1	e7+1	0.976	-	-	-	no_errors	NFATC2IP	HGNC	ENSG00000176953				65	0	0	51	13	20.3125
PRSS22	0	genome.wustl.edu	37	16	2905627	2905627	+	Silent	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	2905627	2905627	G	C	SNP	PRSS22	ENST00000161006	human	ensembl	74_37	-1	known	silent	c.507	p.L169	0.993	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS22	HGNC	ENSG00000005001				178	0	0	101	38	27.3381
PAGR1	0	genome.wustl.edu	37	16	29828286	29828286	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	29828286	29828286	G	T	SNP	PAGR1	ENST00000609618	human	ensembl	74_37	+1	known	missense	c.440	p.R147I	1.000	NULL	NULL	-	no_errors	PAGR1	Uniprot_gn	ENSG00000263136				10	0	0	6	4	40
ASPHD1	0	genome.wustl.edu	37	16	29913005	29913005	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	29913005	29913005	C	T	SNP	ASPHD1	ENST00000308748	human	ensembl	74_37	+1	known	missense	c.713	p.P238L	1.000	NULL	pfam_Asp_Arg_b-Hydrxlase	-	no_errors	ASPHD1	HGNC	ENSG00000174939				91	0	0	79	15	15.9574
TBX6	0	genome.wustl.edu	37	16	30097645	30097645	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	30097645	30097645	C	T	SNP	TBX6	ENST00000279386	human	ensembl	74_37	-1	known	silent	c.1212	p.A404	0.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box,prints_TF_Brachyury	-	no_errors	TBX6	HGNC	ENSG00000149922				60	0	0	32	12	27.2727
ZNF205	0	genome.wustl.edu	37	16	3170173	3170173	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	3170173	3170173	C	T	SNP	ZNF205	ENST00000219091	human	ensembl	74_37	+1	known	silent	c.1512	p.Y504	0.992	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF205	HGNC	ENSG00000122386				119	0	0	75	11	12.7907
PDIA2	0	genome.wustl.edu	37	16	335661	335661	+	Silent	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	335661	335661	C	A	SNP	PDIA2	ENST00000219406	human	ensembl	74_37	+1	known	silent	c.1077	p.S359	0.000	superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Prot_disulphide_isomerase	-	no_errors	PDIA2	HGNC	ENSG00000185615				78	0	0	48	21	30.4348
ANKS3	0	genome.wustl.edu	37	16	4751097	4751097	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	4751097	4751097	T	G	SNP	ANKS3	ENST00000304283	human	ensembl	74_37	-1	known	missense	c.1158	p.Q386H	0.998	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS3	HGNC	ENSG00000168096				330	1	0.302115	203	11	5.14019
ADCY7	0	genome.wustl.edu	37	16	50339707	50339707	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	50339707	50339707	G	A	SNP	ADCY7	ENST00000254235	human	ensembl	74_37	+1	known	missense	c.1699	p.D567N	0.816	pfam_Adenylate_cyclase-like	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY7	HGNC	ENSG00000121281				132	0	0	118	20	14.4928
NLRC5	0	genome.wustl.edu	37	16	57060176	57060176	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	57060176	57060176	C	T	SNP	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	nonsense	c.1321	p.Q441*	0.996	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853				156	0	0	85	20	19.0476
NLRC5	0	genome.wustl.edu	37	16	57060249	57060249	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	57060249	57060249	T	C	SNP	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	missense	c.1394	p.L465P	0.976	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853				103	0	0	48	34	41.4634
MMP15	0	genome.wustl.edu	37	16	58077204	58077204	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	58077204	58077204	G	T	SNP	MMP15	ENST00000219271	human	ensembl	74_37	+1	known	missense	c.1394	p.R465L	0.992	pirsf_Pept_M10A_Metazoans,superfamily_Hemopexin-like_dom	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP15	HGNC	ENSG00000102996				13	0	0	11	2	15.3846
CNOT1	0	genome.wustl.edu	37	16	58557362	58557362	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	58557362	58557362	G	T	SNP	CNOT1	ENST00000317147	human	ensembl	74_37	-1	known	missense	c.6829	p.P2277T	1.000	pfam_CCR4-Not_Not1_C	pfam_CCR4-Not_Not1_C,superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107				237	0	0	143	67	31.9048
CES2	0	genome.wustl.edu	37	16	66976054	66976054	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	66976054	66976054	G	A	SNP	CES2	ENST00000317091	human	ensembl	74_37	+1	known	missense	c.1376	p.G459E	0.023	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES2	HGNC	ENSG00000172831				86	0	0	33	16	32.6531
KIAA0895L	0	genome.wustl.edu	37	16	67214239	67214239	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	67214239	67214239	C	T	SNP	KIAA0895L	ENST00000290881	human	ensembl	74_37	-1	known	missense	c.275	p.R92Q	0.000	NULL	pfam_DUF1704	-	no_errors	KIAA0895L	HGNC	ENSG00000196123				49	0	0	28	17	37.7778
SLC9A5	0	genome.wustl.edu	37	16	67292327	67292327	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	67292327	67292327	G	A	SNP	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	missense	c.1603	p.D535N	1.000	tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740				92	0	0	89	13	12.7451
ST3GAL2	0	genome.wustl.edu	37	16	70422378	70422378	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	70422378	70422378	G	T	SNP	ST3GAL2	ENST00000342907	human	ensembl	74_37	-1	known	missense	c.605	p.P202H	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST3GAL2	HGNC	ENSG00000157350				231	0	0	121	64	34.5946
KLHL36	0	genome.wustl.edu	37	16	84690684	84690684	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	84690684	84690684	G	A	SNP	KLHL36	ENST00000564996	human	ensembl	74_37	+1	known	missense	c.271	p.G91S	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL36	HGNC	ENSG00000135686				85	0	0	54	21	28
SNAI3	0	genome.wustl.edu	37	16	88748098	88748098	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	88748098	88748098	C	T	SNP	SNAI3	ENST00000332281	human	ensembl	74_37	-1	known	missense	c.101	p.C34Y	0.029	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI3	HGNC	ENSG00000185669				51	0	0	47	12	20.339
ACSF3	0	genome.wustl.edu	37	16	89167698	89167698	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	89167698	89167698	T	C	SNP	ACSF3	ENST00000317447	human	ensembl	74_37	+1	known	silent	c.609	p.S203	0.434	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSF3	HGNC	ENSG00000176715				32	0	0	20	7	25.9259
DNAH9	0	genome.wustl.edu	37	17	11607574	11607574	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	11607574	11607574	G	T	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.5206	p.A1736S	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				118	1	0.840336	102	48	32
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				148	1	0.671141	133	44	24.8588
ZSWIM7	0	genome.wustl.edu	37	17	15902817	15902817	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	15902817	15902817	G	A	SNP	ZSWIM7	ENST00000460252	human	ensembl	74_37	-1	known	missense	c.92	p.S31F	0.001	NULL	NULL	-	no_errors	ZSWIM7	HGNC	ENSG00000214941				19	0	0	15	8	34.7826
RASD1	0	genome.wustl.edu	37	17	17399230	17399230	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	17399230	17399230	C	A	SNP	RASD1	ENST00000225688	human	ensembl	74_37	-1	known	missense	c.266	p.R89L	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RASD1	HGNC	ENSG00000108551				50	0	0	29	11	27.5
FLII	0	genome.wustl.edu	37	17	18154278	18154278	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	18154278	18154278	G	A	SNP	FLII	ENST00000327031	human	ensembl	74_37	-1	known	silent	c.1650	p.G550	0.874	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	FLII	HGNC	ENSG00000177731				50	0	0	34	3	8.10811
FLII	0	genome.wustl.edu	37	17	18154776	18154776	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	18154776	18154776	G	C	SNP	FLII	ENST00000327031	human	ensembl	74_37	-1	known	missense	c.1399	p.R467G	0.001	NULL	pfam_Gelsolin_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	FLII	HGNC	ENSG00000177731				109	0	0	54	35	39.3258
KCNJ12	0	genome.wustl.edu	37	17	21318850	21318850	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	21318850	21318850	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.196	p.R66C	1.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185				99	0	0	68	7	9.33333
METTL16	0	genome.wustl.edu	37	17	2310297	2310297	+	RNA	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	2310297	2310297	T	C	SNP	METTL16	ENST00000571332	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.768	-	-	-	no_errors	METTL16	HGNC	ENSG00000127804				44	0	0	34	20	37.037
LIG3	0	genome.wustl.edu	37	17	33329049	33329049	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	33329049	33329049	G	A	SNP	LIG3	ENST00000378526	human	ensembl	74_37	+1	known	missense	c.2600	p.R867H	0.066	NULL	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_Znf_PARP,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG3	HGNC	ENSG00000005156				101	1	0.980392	44	19	30.1587
TRPV1	0	genome.wustl.edu	37	17	3494385	3494385	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	3494385	3494385	C	T	SNP	TRPV1	ENST00000399756	human	ensembl	74_37	-1	known	silent	c.477	p.L159	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPV1-4_channel,tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	-	no_errors	TRPV1	HGNC	ENSG00000196689				29	0	0	19	3	13.6364
SOCS7	0	genome.wustl.edu	37	17	36522218	36522218	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	36522218	36522218	G	A	SNP	SOCS7	ENST00000577233	human	ensembl	74_37	+1	known	missense	c.1109	p.S370N	1.000	NULL	pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS7	HGNC	ENSG00000174111				88	0	0	55	42	43.299
FKBP10	0	genome.wustl.edu	37	17	39974510	39974510	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	39974510	39974510	C	T	SNP	FKBP10	ENST00000489591	human	ensembl	74_37	+1	known	missense	c.415	p.R139W	0.844	NULL	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP10	HGNC	ENSG00000141756				104	0	0	52	24	31.5789
STAT3	0	genome.wustl.edu	37	17	40474420	40474420	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	40474420	40474420	C	A	SNP	STAT3	ENST00000264657	human	ensembl	74_37	-1	known	missense	c.1981	p.D661Y	1.000	pfam_SH2,pfscan_SH2	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,pfscan_SH2	-	no_errors	STAT3	HGNC	ENSG00000168610				227	1	0.438596	140	72	33.9623
MPP2	0	genome.wustl.edu	37	17	41955297	41955297	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	41955297	41955297	C	T	SNP	MPP2	ENST00000461854	human	ensembl	74_37	-1	known	missense	c.1609	p.G537R	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP2	HGNC	ENSG00000108852				110	0	0	68	23	25.2747
FMNL1	0	genome.wustl.edu	37	17	43322382	43322382	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	43322382	43322382	C	T	SNP	FMNL1	ENST00000328118	human	ensembl	74_37	+1	known	silent	c.2635	p.L879	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL1	HGNC	ENSG00000184922				110	0	0	59	28	32.1839
GOSR2	0	genome.wustl.edu	37	17	45016026	45016026	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	45016026	45016026	G	A	SNP	GOSR2	ENST00000439730	human	ensembl	74_37	+1	known	missense	c.539	p.R180Q	1.000	NULL	superfamily_t-SNARE	-	no_errors	GOSR2	HGNC	ENSG00000108433				472	0	0	315	132	29.5302
KPNB1	0	genome.wustl.edu	37	17	45754442	45754442	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	45754442	45754442	C	A	SNP	KPNB1	ENST00000290158	human	ensembl	74_37	+1	known	missense	c.2052	p.N684K	1.000	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,pfam_Armadillo,superfamily_ARM-type_fold,smart_Importin-beta_N,smart_Armadillo,pfscan_HEAT_type_2,pfscan_Importin-beta_N	-	no_errors	KPNB1	HGNC	ENSG00000108424				110	0	0	100	19	15.9664
SNX11	0	genome.wustl.edu	37	17	46189428	46189428	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	46189428	46189428	C	T	SNP	SNX11	ENST00000359238	human	ensembl	74_37	+1	known	missense	c.23	p.S8L	1.000	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX11	HGNC	ENSG00000002919				153	0	0	115	7	5.7377
HOXB3	0	genome.wustl.edu	37	17	46628177	46628177	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	46628177	46628177	G	A	SNP	HOXB3	ENST00000311626	human	ensembl	74_37	-1	known	missense	c.815	p.T272M	0.954	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB3	HGNC	ENSG00000120093				213	0	0	160	25	13.5135
KIF1C	0	genome.wustl.edu	37	17	4905816	4905816	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	4905816	4905816	C	T	SNP	KIF1C	ENST00000320785	human	ensembl	74_37	+1	known	missense	c.487	p.R163W	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1C	HGNC	ENSG00000129250				433	0	0	242	137	36.1478
BCAS3	0	genome.wustl.edu	37	17	58980003	58980003	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	58980003	58980003	G	A	SNP	BCAS3	ENST00000390652	human	ensembl	74_37	+1	known	missense	c.761	p.R254H	1.000	NULL	pfam_BCAS3,pfam_WD40_repeat	-	no_errors	BCAS3	HGNC	ENSG00000141376				247	0	0	173	94	35.206
MARCH10	0	genome.wustl.edu	37	17	60837269	60837269	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	60837269	60837269	T	C	SNP	MARCH10	ENST00000311269	human	ensembl	74_37	-1	known	silent	c.309	p.S103	0.997	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH10	HGNC	ENSG00000173838				185	0	0	111	67	37.6404
FTSJ3	0	genome.wustl.edu	37	17	61901290	61901290	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	61901290	61901290	C	T	SNP	FTSJ3	ENST00000427159	human	ensembl	74_37	-1	known	missense	c.1177	p.E393K	1.000	pfam_rRNA_MeTfrase_Spb1_DUF3381	pfam_rRNA_MeTfrase_Spb1_C,pfam_rRNA_MeTrfase_FtsJ_dom,pfam_rRNA_MeTfrase_Spb1_DUF3381	-	no_errors	FTSJ3	HGNC	ENSG00000108592				121	0	0	102	18	15
ICAM2	0	genome.wustl.edu	37	17	62081214	62081214	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	62081214	62081214	G	T	SNP	ICAM2	ENST00000412356	human	ensembl	74_37	-1	known	missense	c.439	p.L147I	0.976	prints_ICAM_VCAM_N	pfam_ICAM_N,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM2	HGNC	ENSG00000108622				115	0	0	66	15	18.5185
ERN1	0	genome.wustl.edu	37	17	62137923	62137923	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	62137923	62137923	G	A	SNP	ERN1	ENST00000433197	human	ensembl	74_37	-1	known	missense	c.1112	p.A371V	0.997	NULL	pfam_Prot_kinase_dom,pfam_KEN_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PUG-dom,pfscan_Prot_kinase_dom	-	no_errors	ERN1	HGNC	ENSG00000178607				159	0	0	92	50	35.2113
SOX9	0	genome.wustl.edu	37	17	70120258	70120258	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	70120258	70120258	C	T	SNP	SOX9	ENST00000245479	human	ensembl	74_37	+1	known	silent	c.1260	p.Y420	1.000	NULL	pfam_Sox_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX9	HGNC	ENSG00000125398				273	0	0	175	68	27.9835
ACAP1	0	genome.wustl.edu	37	17	7246726	7246726	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	7246726	7246726	C	T	SNP	ACAP1	ENST00000158762	human	ensembl	74_37	+1	known	missense	c.373	p.R125W	0.992	pfscan_PLipase_C_PInositol-sp_X_dom	pfam_ArfGAP,pfam_Pleckstrin_homology,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP1	HGNC	ENSG00000072818				175	0	0	99	52	34.4371
TNRC6C	0	genome.wustl.edu	37	17	76045711	76045711	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	76045711	76045711	A	G	SNP	TNRC6C	ENST00000335749	human	ensembl	74_37	+1	known	missense	c.568	p.M190V	0.996	NULL	pfam_Argonaute_hook_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687				415	0	0	246	117	32.2314
USP36	0	genome.wustl.edu	37	17	76832231	76832231	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	76832231	76832231	C	T	SNP	USP36	ENST00000312010	human	ensembl	74_37	-1	known	missense	c.215	p.R72H	0.949	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP36	HGNC	ENSG00000055483				64	0	0	47	23	32.8571
CCDC40	0	genome.wustl.edu	37	17	78069228	78069228	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	78069228	78069228	G	A	SNP	CCDC40	ENST00000397545	human	ensembl	74_37	+1	known	missense	c.2999	p.R1000Q	0.017	NULL	pfam_E3_ubiquit_lig_BRE1	-	no_errors	CCDC40	HGNC	ENSG00000141519				95	0	0	37	16	30.1887
CARD14	0	genome.wustl.edu	37	17	78157813	78157813	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	78157813	78157813	C	T	SNP	CARD14	ENST00000344227	human	ensembl	74_37	+1	known	missense	c.451	p.R151W	0.957	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD,pfscan_PDZ,pfscan_Guanylate_kin-like	-	no_errors	CARD14	HGNC	ENSG00000141527				20	0	0	2	5	71.4286
B3GNTL1	0	genome.wustl.edu	37	17	80919007	80919007	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	80919007	80919007	G	A	SNP	B3GNTL1	ENST00000320865	human	ensembl	74_37	-1	known	silent	c.651	p.G217	0.603	NULL	pfam_Glyco_trans_2	-	no_errors	B3GNTL1	HGNC	ENSG00000175711				32	0	0	13	4	23.5294
LOC644669	0	genome.wustl.edu	37	18	15323264	15323264	+	RNA	SNP	T	T	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	15323264	15323264	T	A	SNP	LOC644669	ENST00000455308	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.110	-	-	-	no_errors	AP005901.1	Clone_based_vega_gene	ENSG00000215512				11	0	0	10	3	23.0769
DSG1	0	genome.wustl.edu	37	18	28913591	28913591	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	28913591	28913591	C	T	SNP	DSG1	ENST00000257192	human	ensembl	74_37	+1	known	nonsense	c.724	p.R242*	0.147	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Desmoglein,prints_Cadherin,prints_Desmosomal_cadherin	-	no_errors	DSG1	HGNC	ENSG00000134760				68	0	0	79	34	30.0885
SETBP1	0	genome.wustl.edu	37	18	42532846	42532846	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	42532846	42532846	T	G	SNP	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	missense	c.3541	p.F1181V	1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217				101	0	0	106	23	17.8295
GRP	0	genome.wustl.edu	37	18	56892843	56892843	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	56892843	56892843	C	T	SNP	GRP	ENST00000256857	human	ensembl	74_37	+1	known	missense	c.259	p.L87F	0.079	NULL	pfam_Bombesin	-	no_errors	GRP	HGNC	ENSG00000134443				113	0	0	99	43	30.2817
CYB5A	0	genome.wustl.edu	37	18	71920841	71920841	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	71920841	71920841	C	T	SNP	CYB5A	ENST00000340533	human	ensembl	74_37	-1	known	missense	c.383	p.R128H	0.959	NULL	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	CYB5A	HGNC	ENSG00000166347				44	0	0	41	6	12.766
MBP	0	genome.wustl.edu	37	18	74817183	74817183	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	74817183	74817183	G	A	SNP	MBP	ENST00000355994	human	ensembl	74_37	-1	known	missense	c.35	p.A12V	0.000	NULL	pfam_Myelin_BP,prints_Myelin_BP	-	no_errors	MBP	HGNC	ENSG00000197971				178	0	0	118	48	28.9157
SALL3	0	genome.wustl.edu	37	18	76753543	76753543	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	76753543	76753543	G	A	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.1552	p.V518M	0.997	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				22	0	0	18	9	33.3333
CTDP1	0	genome.wustl.edu	37	18	77475181	77475181	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	77475181	77475181	A	C	SNP	CTDP1	ENST00000299543	human	ensembl	74_37	+1	known	missense	c.1721	p.Q574P	1.000	NULL	pfam_FCP1_C,pfam_NIF,superfamily_HAD-like_dom,superfamily_BRCT_dom,superfamily_Single_hybrid_motif,smart_NIF,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_NIF,tigrfam_FCP1_euk	-	no_errors	CTDP1	HGNC	ENSG00000060069				38	0	0	8	4	33.3333
TMEM259	0	genome.wustl.edu	37	19	1010864	1010864	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	1010864	1010864	C	T	SNP	TMEM259	ENST00000356663	human	ensembl	74_37	-1	known	missense	c.1348	p.E450K	1.000	NULL	pfam_Membralin	-	no_errors	TMEM259	HGNC	ENSG00000182087				21	0	0	17	11	39.2857
MAN2B1	0	genome.wustl.edu	37	19	12759146	12759146	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	12759146	12759146	G	A	SNP	MAN2B1	ENST00000456935	human	ensembl	74_37	-1	known	missense	c.2507	p.A836V	0.000	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B1	HGNC	ENSG00000104774				66	0	0	37	13	26
RAD23A	0	genome.wustl.edu	37	19	13059913	13059913	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	13059913	13059913	G	A	SNP	RAD23A	ENST00000586534	human	ensembl	74_37	+1	known	missense	c.619	p.E207K	0.998	superfamily_UBA-like,tigrfam_Rad23	pfam_XPC-bd,pfam_UBA/Ts_N,pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,superfamily_XPC-bd,superfamily_UBA-like,smart_Ubiquitin_dom,smart_UBA/transl_elong_EF1B_N_euk,smart_STI1_HS-bd,prints_Rad23,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup,tigrfam_Rad23	-	no_errors	RAD23A	HGNC	ENSG00000179262				28	0	0	24	3	11.1111
RFX1	0	genome.wustl.edu	37	19	14074062	14074062	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	14074062	14074062	G	A	SNP	RFX1	ENST00000254325	human	ensembl	74_37	-1	known	silent	c.2596	p.L866	1.000	NULL	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX1	HGNC	ENSG00000132005				49	0	0	17	11	39.2857
CYP4F8	0	genome.wustl.edu	37	19	15726481	15726481	+	RNA	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	15726481	15726481	G	A	SNP	CYP4F8	ENST00000325723	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CYP4F8	HGNC	ENSG00000186526				55	0	0	40	23	36.5079
ANKLE1	0	genome.wustl.edu	37	19	17394228	17394228	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	17394228	17394228	G	A	SNP	ANKLE1	ENST00000394458	human	ensembl	74_37	+1	known	missense	c.655	p.A219T	0.000	NULL	pfam_Ankyrin_rpt,pfam_LEM_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_LEM/LEM-like_dom,superfamily_Lactate_DH/Glyco_Ohase_4_C,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_LEM_dom	-	no_errors	ANKLE1	HGNC	ENSG00000160117				169	0	0	85	33	27.9661
KIAA1683	0	genome.wustl.edu	37	19	18376152	18376152	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	18376152	18376152	G	A	SNP	KIAA1683	ENST00000392413	human	ensembl	74_37	-1	known	missense	c.2198	p.A733V	0.000	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	KIAA1683	HGNC	ENSG00000130518				135	0	0	89	39	30.4688
C19orf60	0	genome.wustl.edu	37	19	18700331	18700331	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	18700331	18700331	C	T	SNP	C19orf60	ENST00000358607	human	ensembl	74_37	+1	known	silent	c.291	p.F97	0.996	NULL	NULL	-	no_errors	C19orf60	HGNC	ENSG00000006015				13	0	0	5	4	44.4444
SUGP2	0	genome.wustl.edu	37	19	19115185	19115185	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	19115185	19115185	G	A	SNP	SUGP2	ENST00000337018	human	ensembl	74_37	-1	known	silent	c.2721	p.P907	0.000	NULL	pfam_Surp,pfam_G_patch_dom,superfamily_Surp,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	SUGP2	HGNC	ENSG00000064607				37	0	0	30	19	38.7755
ARMC6	0	genome.wustl.edu	37	19	19166101	19166101	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	19166101	19166101	C	A	SNP	ARMC6	ENST00000392336	human	ensembl	74_37	+1	known	missense	c.1051	p.L351M	1.000	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC6	HGNC	ENSG00000105676				156	0	0	99	13	11.6071
THOP1	0	genome.wustl.edu	37	19	2810725	2810725	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	2810725	2810725	C	T	SNP	THOP1	ENST00000307741	human	ensembl	74_37	+1	known	missense	c.1730	p.A577V	0.014	pfam_Pept_M3A_M3B	pfam_Pept_M3A_M3B	-	no_errors	THOP1	HGNC	ENSG00000172009				17	0	0	10	4	28.5714
ZNF555	0	genome.wustl.edu	37	19	2852714	2852714	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	2852714	2852714	G	A	SNP	ZNF555	ENST00000334241	human	ensembl	74_37	+1	known	silent	c.651	p.R217	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF555	HGNC	ENSG00000186300				132	0	0	96	49	33.7931
ZNF556	0	genome.wustl.edu	37	19	2877633	2877633	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	2877633	2877633	C	T	SNP	ZNF556	ENST00000307635	human	ensembl	74_37	+1	known	missense	c.677	p.T226I	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF556	HGNC	ENSG00000172000				100	0	0	74	23	23.7113
GNA11	0	genome.wustl.edu	37	19	3113410	3113410	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	3113410	3113410	T	C	SNP	GNA11	ENST00000078429	human	ensembl	74_37	+1	known	missense	c.404	p.L135P	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_Q,prints_Fungi_Gprotein_alpha	-	no_errors	GNA11	HGNC	ENSG00000088256				79	0	0	71	4	5.33333
RBM42	0	genome.wustl.edu	37	19	36124838	36124838	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	36124838	36124838	C	T	SNP	RBM42	ENST00000262633	human	ensembl	74_37	+1	known	silent	c.934	p.L312	0.961	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM42	HGNC	ENSG00000126254				19	0	0	16	4	20
ZNF345	0	genome.wustl.edu	37	19	37368636	37368636	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	37368636	37368636	A	G	SNP	ZNF345	ENST00000420450	human	ensembl	74_37	+1	known	missense	c.904	p.T302A	0.082	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF345	HGNC	ENSG00000251247				129	0	0	74	40	35.0877
SAMD4B	0	genome.wustl.edu	37	19	39871247	39871247	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	39871247	39871247	C	T	SNP	SAMD4B	ENST00000314471	human	ensembl	74_37	+1	known	missense	c.1670	p.S557L	0.999	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	-	no_errors	SAMD4B	HGNC	ENSG00000179134				116	0	0	83	37	30.8333
PAF1	0	genome.wustl.edu	37	19	39879317	39879317	+	Splice_Site	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	39879317	39879317	C	T	SNP	PAF1	ENST00000221265	human	ensembl	74_37	-1	known	splice_site	c.741-1	e10-1	1.000	-	-	-	no_errors	PAF1	HGNC	ENSG00000006712				154	0	0	90	34	27.4194
LTBP4	0	genome.wustl.edu	37	19	41123127	41123127	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	41123127	41123127	G	A	SNP	LTBP4	ENST00000308370	human	ensembl	74_37	+1	known	missense	c.3265	p.V1089M	1.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006				31	0	0	20	9	31.0345
SNRPA	0	genome.wustl.edu	37	19	41268833	41268833	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	41268833	41268833	C	T	SNP	SNRPA	ENST00000243563	human	ensembl	74_37	+1	known	missense	c.454	p.R152C	0.998	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SNRPA	HGNC	ENSG00000077312				65	0	0	26	4	13.3333
AXL	0	genome.wustl.edu	37	19	41765752	41765752	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	41765752	41765752	C	T	SNP	AXL	ENST00000301178	human	ensembl	74_37	+1	known	silent	c.2628	p.P876	0.389	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AXL	HGNC	ENSG00000167601				67	0	0	46	17	26.9841
ATP1A3	0	genome.wustl.edu	37	19	42471440	42471440	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	42471440	42471440	C	T	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	missense	c.2974	p.D992N	1.000	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A3	HGNC	ENSG00000105409				80	0	0	36	27	42.8571
CIC	0	genome.wustl.edu	37	19	42795871	42795871	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	42795871	42795871	C	T	SNP	CIC	ENST00000575354	human	ensembl	74_37	+1	known	nonsense	c.2860	p.Q954*	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				157	0	0	111	36	24.4898
KCNN4	0	genome.wustl.edu	37	19	44278410	44278410	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	44278410	44278410	C	T	SNP	KCNN4	ENST00000262888	human	ensembl	74_37	-1	known	missense	c.617	p.R206H	1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom	-	no_errors	KCNN4	HGNC	ENSG00000104783				31	0	0	12	15	55.5556
ZNF227	0	genome.wustl.edu	37	19	44738862	44738862	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	44738862	44738862	G	T	SNP	ZNF227	ENST00000313040	human	ensembl	74_37	+1	known	missense	c.279	p.K93N	0.000	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF227	HGNC	ENSG00000131115				93	0	0	45	25	35.7143
PPP1R13L	0	genome.wustl.edu	37	19	45885875	45885875	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	45885875	45885875	G	A	SNP	PPP1R13L	ENST00000360957	human	ensembl	74_37	-1	known	silent	c.2358	p.T786	0.992	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PPP1R13L	HGNC	ENSG00000104881				117	0	0	74	42	36.2069
HIF3A	0	genome.wustl.edu	37	19	46815457	46815457	+	Silent	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	46815457	46815457	C	A	SNP	HIF3A	ENST00000377670	human	ensembl	74_37	+1	known	silent	c.810	p.I270	0.997	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS,tigrfam_PAS	pfam_PAS_fold_3,pfam_PAS_fold,pfam_HIF_alpha_subunit,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,tigrfam_PAS	-	no_errors	HIF3A	HGNC	ENSG00000124440				251	0	0	116	63	35.1955
TICAM1	0	genome.wustl.edu	37	19	4818338	4818338	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	4818338	4818338	C	T	SNP	TICAM1	ENST00000248244	human	ensembl	74_37	-1	known	missense	c.52	p.A18T	0.006	pirsf_TICAM1	superfamily_TIR_dom,pirsf_TICAM1	-	no_errors	TICAM1	HGNC	ENSG00000127666				75	0	0	44	30	40.5405
PRR12	0	genome.wustl.edu	37	19	50102838	50102838	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	50102838	50102838	C	T	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	missense	c.3988	p.P1330S	0.134	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464				12	0	0	10	3	23.0769
MYH14	0	genome.wustl.edu	37	19	50785086	50785086	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	50785086	50785086	G	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	missense	c.4526	p.R1509H	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357				46	0	0	16	6	27.2727
SHANK1	0	genome.wustl.edu	37	19	51219986	51219986	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	51219986	51219986	A	G	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	missense	c.191	p.V64A	0.974	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681				91	0	0	94	12	11.3208
KLK13	0	genome.wustl.edu	37	19	51563198	51563198	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	51563198	51563198	T	C	SNP	KLK13	ENST00000595793	human	ensembl	74_37	-1	known	missense	c.392	p.Q131R	0.000	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK13	HGNC	ENSG00000167759				145	0	0	102	10	8.92857
ZNF808	0	genome.wustl.edu	37	19	53057635	53057635	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	53057635	53057635	G	A	SNP	ZNF808	ENST00000359798	human	ensembl	74_37	+1	known	missense	c.1466	p.R489H	0.034	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF808	HGNC	ENSG00000198482				152	0	0	84	43	33.8583
ZNF611	0	genome.wustl.edu	37	19	53209310	53209310	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	53209310	53209310	T	C	SNP	ZNF611	ENST00000319783	human	ensembl	74_37	-1	known	missense	c.998	p.D333G	0.079	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF611	HGNC	ENSG00000213020				156	0	0	116	53	31.3609
NDUFA3	0	genome.wustl.edu	37	19	54609301	54609301	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	54609301	54609301	C	T	SNP	NDUFA3	ENST00000419113	human	ensembl	74_37	+1	known	missense	c.146	p.T49M	0.937	NULL	NULL	-	no_errors	NDUFA3	HGNC	ENSG00000170906				219	0	0	100	40	28.5714
ZNF814	0	genome.wustl.edu	37	19	58384908	58384908	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	58384908	58384908	C	T	SNP	ZNF814	ENST00000435989	human	ensembl	74_37	-1	known	missense	c.1850	p.R617H	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF814	HGNC	ENSG00000204514				92	0	0	72	20	21.7391
PSPN	0	genome.wustl.edu	37	19	6375771	6375771	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	6375771	6375771	G	A	SNP	PSPN	ENST00000245810	human	ensembl	74_37	-1	known	silent	c.90	p.P30	0.000	NULL	pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	PSPN	HGNC	ENSG00000125650				67	0	0	43	27	38.5714
CAMSAP3	0	genome.wustl.edu	37	19	7682705	7682705	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	7682705	7682705	C	T	SNP	CAMSAP3	ENST00000446248	human	ensembl	74_37	+1	known	missense	c.3593	p.A1198V	0.979	pfam_CKK_domain,superfamily_PRC_barrel-like	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826				82	0	0	33	24	42.1053
XAB2	0	genome.wustl.edu	37	19	7693109	7693109	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	7693109	7693109	C	T	SNP	XAB2	ENST00000358368	human	ensembl	74_37	-1	known	missense	c.127	p.E43K	1.000	NULL	smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	XAB2	HGNC	ENSG00000076924				106	0	0	56	29	34.1176
R3HDM4	0	genome.wustl.edu	37	19	902078	902078	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	902078	902078	A	G	SNP	R3HDM4	ENST00000361574	human	ensembl	74_37	-1	known	missense	c.124	p.S42P	0.014	NULL	pfscan_R3H_ss-bd	-	no_errors	R3HDM4	HGNC	ENSG00000198858				175	0	0	117	36	23.5294
ZNF559	0	genome.wustl.edu	37	19	9452461	9452461	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	9452461	9452461	A	G	SNP	ZNF559	ENST00000393883	human	ensembl	74_37	+1	known	missense	c.334	p.T112A	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF559	HGNC	ENSG00000188321				133	0	0	124	8	6.06061
ZNF559	0	genome.wustl.edu	37	19	9452553	9452553	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	9452553	9452553	C	T	SNP	ZNF559	ENST00000393883	human	ensembl	74_37	+1	known	silent	c.426	p.I142	0.005	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF559	HGNC	ENSG00000188321				199	0	0	107	57	34.7561
ZNF561	0	genome.wustl.edu	37	19	9721783	9721783	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	9721783	9721783	G	A	SNP	ZNF561	ENST00000302851	human	ensembl	74_37	-1	known	missense	c.554	p.A185V	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF561	HGNC	ENSG00000171469				62	0	0	58	26	30.9524
REV1	0	genome.wustl.edu	37	2	100022484	100022484	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	100022484	100022484	G	A	SNP	REV1	ENST00000258428	human	ensembl	74_37	-1	known	missense	c.2699	p.T900I	0.135	pirsf_REV1	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,pfam_BRCT_dom,superfamily_BRCT_dom,superfamily_DNA_pol_Y-fam_little_finger,smart_BRCT_dom,pirsf_REV1,pfscan_BRCT_dom,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	REV1	HGNC	ENSG00000135945				70	0	0	56	26	31.7073
TGFBRAP1	0	genome.wustl.edu	37	2	105883890	105883890	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	105883890	105883890	C	T	SNP	TGFBRAP1	ENST00000258449	human	ensembl	74_37	-1	known	missense	c.2533	p.A845T	0.969	pfam_VPS39/TGF_beta_rcpt-assoc_2	pfam_VPS39/TGF_beta_rcpt-assoc_2,pfam_VPS39/TGF_beta_rcpt-assoc_1,pfam_Clathrin_H-chain/VPS_repeat,pfam_Citron	-	no_errors	TGFBRAP1	HGNC	ENSG00000135966				159	0	0	92	50	35.2113
EDAR	0	genome.wustl.edu	37	2	109527396	109527396	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	109527396	109527396	C	T	SNP	EDAR	ENST00000376651	human	ensembl	74_37	-1	known	missense	c.662	p.G221D	0.000	NULL	pfam_Death_domain,superfamily_DEATH-like_dom	-	no_errors	EDAR	HGNC	ENSG00000135960				70	0	0	42	19	31.1475
BUB1	0	genome.wustl.edu	37	2	111408256	111408256	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	111408256	111408256	C	A	SNP	BUB1	ENST00000302759	human	ensembl	74_37	-1	known	missense	c.2070	p.E690D	0.005	NULL	pfam_Mad3_BUB1_I,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Mad3_BUB1_I,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	BUB1	HGNC	ENSG00000169679				27	0	0	36	14	28
IMP4	0	genome.wustl.edu	37	2	131102231	131102231	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	131102231	131102231	C	T	SNP	IMP4	ENST00000259239	human	ensembl	74_37	+1	known	nonsense	c.142	p.R48*	0.998	NULL	pfam_Brix,superfamily_Anticodon-bd,smart_Brix,pfscan_Brix	-	no_errors	IMP4	HGNC	ENSG00000136718				153	0	0	97	52	34.8993
AMER3	0	genome.wustl.edu	37	2	131521723	131521723	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	131521723	131521723	C	T	SNP	AMER3	ENST00000321420	human	ensembl	74_37	+1	known	missense	c.2078	p.A693V	0.000	NULL	pfam_Uncharacterised_FAM123	-	no_errors	AMER3	HGNC	ENSG00000178171				38	0	0	17	12	41.3793
LOC150776	0	genome.wustl.edu	37	2	132259072	132259072	+	RNA	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	132259072	132259072	C	T	SNP	LOC150776	ENST00000438378	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	AC093838.4	Clone_based_vega_gene	ENSG00000152117				37	0	0	19	6	24
THSD7B	0	genome.wustl.edu	37	2	138030222	138030222	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	138030222	138030222	C	T	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	missense	c.2386	p.P796S	1.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229				12	0	0	26	6	18.75
KYNU	0	genome.wustl.edu	37	2	143742717	143742717	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	143742717	143742717	G	A	SNP	KYNU	ENST00000264170	human	ensembl	74_37	+1	known	nonsense	c.794	p.W265*	1.000	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,tigrfam_Kynureninase	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,tigrfam_Kynureninase	-	no_errors	KYNU	HGNC	ENSG00000115919				70	0	0	133	59	30.7292
ACVR2A	0	genome.wustl.edu	37	2	148684747	148684747	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	148684747	148684747	G	A	SNP	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	missense	c.1446	p.M482I	1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				22	0	0	53	25	32.0513
TNFAIP6	0	genome.wustl.edu	37	2	152235983	152235983	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	152235983	152235983	A	C	SNP	TNFAIP6	ENST00000243347	human	ensembl	74_37	+1	known	missense	c.770	p.K257T	1.000	NULL	pfam_CUB_dom,pfam_Link,superfamily_CUB_dom,superfamily_C-type_lectin_fold,smart_Link,smart_CUB_dom,pfscan_CUB_dom,pfscan_Link,prints_Link	-	no_errors	TNFAIP6	HGNC	ENSG00000123610				160	0	0	81	44	35.2
GALNT13	0	genome.wustl.edu	37	2	155099258	155099258	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	155099258	155099258	C	T	SNP	GALNT13	ENST00000409237	human	ensembl	74_37	+1	known	missense	c.526	p.P176S	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT13	HGNC	ENSG00000144278				27	0	0	60	9	13.0435
SCN2A	0	genome.wustl.edu	37	2	166166916	166166916	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	166166916	166166916	G	A	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.781	p.V261M	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531				162	0	0	194	99	33.7884
XIRP2	0	genome.wustl.edu	37	2	168102105	168102105	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	168102105	168102105	A	C	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.4203	p.E1401D	0.976	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092				43	0	0	78	19	19.5876
SP5	0	genome.wustl.edu	37	2	171572954	171572954	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	171572954	171572954	G	A	SNP	SP5	ENST00000375281	human	ensembl	74_37	+1	known	silent	c.237	p.A79	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP5	HGNC	ENSG00000204335				40	0	0	15	3	16.6667
HOXD12	0	genome.wustl.edu	37	2	176965452	176965452	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	176965452	176965452	C	T	SNP	HOXD12	ENST00000406506	human	ensembl	74_37	+1	known	silent	c.777	p.R259	0.760	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXD12	HGNC	ENSG00000170178				43	0	0	34	4	10.5263
RAD51AP2	0	genome.wustl.edu	37	2	17697946	17697946	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	17697946	17697946	T	C	SNP	RAD51AP2	ENST00000399080	human	ensembl	74_37	-1	known	silent	c.1737	p.L579	0.000	NULL	NULL	-	no_errors	RAD51AP2	HGNC	ENSG00000214842				12	0	0	4	3	42.8571
TTN	0	genome.wustl.edu	37	2	179427391	179427391	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	179427391	179427391	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.75764	p.T25255N	0.145	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				23	0	0	56	28	33.3333
NCKAP1	0	genome.wustl.edu	37	2	183792931	183792931	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	183792931	183792931	A	G	SNP	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	silent	c.3112	p.L1038	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1	-	no_errors	NCKAP1	HGNC	ENSG00000061676				76	0	0	75	40	34.7826
ZNF804A	0	genome.wustl.edu	37	2	185802457	185802457	+	Silent	SNP	T	T	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	185802457	185802457	T	A	SNP	ZNF804A	ENST00000302277	human	ensembl	74_37	+1	known	silent	c.2334	p.S778	0.966	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804A	HGNC	ENSG00000170396				19	0	0	34	25	42.3729
TYW5	0	genome.wustl.edu	37	2	200800752	200800752	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	200800752	200800752	A	G	SNP	TYW5	ENST00000354611	human	ensembl	74_37	-1	known	missense	c.593	p.L198P	0.834	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	TYW5	HGNC	ENSG00000162971				122	0	0	82	48	36.9231
BZW1	0	genome.wustl.edu	37	2	201681935	201681935	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	201681935	201681935	G	A	SNP	BZW1	ENST00000409600	human	ensembl	74_37	+1	known	missense	c.509	p.S170N	1.000	NULL	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	-	no_errors	BZW1	HGNC	ENSG00000082153				92	0	0	66	34	34
ORC2	0	genome.wustl.edu	37	2	201784950	201784950	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	201784950	201784950	A	G	SNP	ORC2	ENST00000234296	human	ensembl	74_37	-1	known	silent	c.1461	p.N487	0.979	pfam_ORC2	pfam_ORC2	-	no_errors	ORC2	HGNC	ENSG00000115942				81	0	0	48	25	34.2466
CDK15	0	genome.wustl.edu	37	2	202712142	202712142	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	202712142	202712142	A	G	SNP	CDK15	ENST00000374598	human	ensembl	74_37	+1	known	missense	c.890	p.Q297R	0.984	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK15	HGNC	ENSG00000138395				127	0	0	82	29	26.1261
BMPR2	0	genome.wustl.edu	37	2	203242245	203242245	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	203242245	203242245	G	A	SNP	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	nonsense	c.48	p.W16*	0.403	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217				131	0	0	87	32	26.8908
BMPR2	0	genome.wustl.edu	37	2	203407105	203407105	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	203407105	203407105	C	T	SNP	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	nonsense	c.1348	p.Q450*	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217				102	0	0	71	30	29.703
INO80D	0	genome.wustl.edu	37	2	206869417	206869417	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	206869417	206869417	G	A	SNP	INO80D	ENST00000403263	human	ensembl	74_37	-1	known	missense	c.2759	p.T920M	1.000	NULL	NULL	-	no_errors	INO80D	HGNC	ENSG00000114933				49	0	0	23	17	42.5
CRYGC	0	genome.wustl.edu	37	2	208994242	208994242	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	208994242	208994242	G	A	SNP	CRYGC	ENST00000282141	human	ensembl	74_37	-1	known	missense	c.175	p.R59W	0.966	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYGC	HGNC	ENSG00000163254				183	1	0.543478	107	55	33.9506
ZNF142	0	genome.wustl.edu	37	2	219507069	219507069	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	219507069	219507069	C	T	SNP	ZNF142	ENST00000411696	human	ensembl	74_37	-1	known	silent	c.4170	p.R1390	0.998	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568				132	0	0	81	40	33.0579
CCDC108	0	genome.wustl.edu	37	2	219892428	219892428	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	219892428	219892428	G	A	SNP	CCDC108	ENST00000341552	human	ensembl	74_37	-1	known	missense	c.2155	p.P719S	1.000	NULL	superfamily_PapD-like,pfscan_MSP_dom	-	no_errors	CCDC108	HGNC	ENSG00000181378				219	0	0	116	56	32.5581
COL4A3	0	genome.wustl.edu	37	2	228118042	228118042	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	228118042	228118042	A	G	SNP	COL4A3	ENST00000396578	human	ensembl	74_37	+1	known	missense	c.676	p.K226E	0.485	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031				131	0	0	160	72	31.0345
COL4A3	0	genome.wustl.edu	37	2	228141189	228141189	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	228141189	228141189	A	G	SNP	COL4A3	ENST00000396578	human	ensembl	74_37	+1	known	silent	c.2016	p.P672	0.998	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031				72	0	0	30	14	31.8182
SP100	0	genome.wustl.edu	37	2	231328834	231328834	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	231328834	231328834	A	G	SNP	SP100	ENST00000340126	human	ensembl	74_37	+1	known	silent	c.1110	p.E370	0.004	NULL	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP100	HGNC	ENSG00000067066				42	0	0	79	5	5.95238
B3GNT7	0	genome.wustl.edu	37	2	232263248	232263248	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	232263248	232263248	G	A	SNP	B3GNT7	ENST00000287590	human	ensembl	74_37	+1	known	missense	c.818	p.R273Q	0.494	pfam_Glyco_trans_31,pfam_Fringe-like	pfam_Glyco_trans_31,pfam_Fringe-like	-	no_errors	B3GNT7	HGNC	ENSG00000156966				43	0	0	20	12	37.5
DIS3L2	0	genome.wustl.edu	37	2	233201245	233201245	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	233201245	233201245	G	T	SNP	DIS3L2	ENST00000325385	human	ensembl	74_37	+1	known	missense	c.2563	p.A855S	0.971	NULL	NULL	-	no_errors	DIS3L2	HGNC	ENSG00000144535				47	0	0	25	13	34.2105
NEU2	0	genome.wustl.edu	37	2	233898990	233898990	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	233898990	233898990	G	A	SNP	NEU2	ENST00000233840	human	ensembl	74_37	+1	known	silent	c.366	p.T122	0.005	superfamily_Sialidases	superfamily_Sialidases	-	no_errors	NEU2	HGNC	ENSG00000115488				108	0	0	41	10	19.6078
IQCA1	0	genome.wustl.edu	37	2	237272542	237272542	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	237272542	237272542	G	A	SNP	IQCA1	ENST00000409907	human	ensembl	74_37	-1	known	silent	c.1750	p.L584	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCA1	HGNC	ENSG00000132321				162	0	0	118	52	30.5882
D2HGDH	0	genome.wustl.edu	37	2	242695175	242695175	+	RNA	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	242695175	242695175	G	A	SNP	D2HGDH	ENST00000486953	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	D2HGDH	HGNC	ENSG00000180902				53	0	0	22	12	35.2941
FKBP1B	0	genome.wustl.edu	37	2	24285969	24285969	+	Silent	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	24285969	24285969	C	A	SNP	FKBP1B	ENST00000380986	human	ensembl	74_37	+1	known	silent	c.234	p.T78	1.000	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP1B	HGNC	ENSG00000119782				68	0	0	50	15	23.0769
SLC5A6	0	genome.wustl.edu	37	2	27430423	27430423	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	27430423	27430423	G	A	SNP	SLC5A6	ENST00000310574	human	ensembl	74_37	-1	known	silent	c.96	p.F32	0.004	pfscan_Na/solute_symporter	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A6	HGNC	ENSG00000138074				101	0	0	46	23	33.3333
SNX17	0	genome.wustl.edu	37	2	27598769	27598769	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	27598769	27598769	C	T	SNP	SNX17	ENST00000233575	human	ensembl	74_37	+1	known	silent	c.1035	p.R345	1.000	NULL	pfam_Phox,superfamily_Phox,superfamily_FERM_central,smart_Phox,pfscan_Phox,pfscan_Ras-assoc	-	no_errors	SNX17	HGNC	ENSG00000115234				112	0	0	55	32	36.7816
C2orf16	0	genome.wustl.edu	37	2	27803556	27803556	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	27803556	27803556	C	T	SNP	C2orf16	ENST00000408964	human	ensembl	74_37	+1	known	missense	c.4117	p.R1373W	0.304	NULL	NULL	-	no_errors	C2orf16	HGNC	ENSG00000221843				106	0	0	78	44	36.0656
DHX57	0	genome.wustl.edu	37	2	39095410	39095410	+	Silent	SNP	T	T	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	39095410	39095410	T	A	SNP	DHX57	ENST00000295373	human	ensembl	74_37	-1	known	silent	c.138	p.G46	0.340	NULL	pfam_RWD-domain,pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Znf_CCCH,superfamily_P-loop_NTPase,superfamily_UBA-like,superfamily_UBQ-conjugating_enzyme/RWD,smart_Znf_CCCH,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX57	HGNC	ENSG00000163214				86	0	0	90	8	8.16327
SPTBN1	0	genome.wustl.edu	37	2	54873365	54873365	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	54873365	54873365	G	A	SNP	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	missense	c.4619	p.R1540H	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306				232	0	0	221	33	12.9921
SPTBN1	0	genome.wustl.edu	37	2	54880747	54880747	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	54880747	54880747	T	G	SNP	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	missense	c.5579	p.V1860G	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306				107	0	0	74	42	36.2069
SLC1A4	0	genome.wustl.edu	37	2	65243635	65243635	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	65243635	65243635	A	G	SNP	SLC1A4	ENST00000234256	human	ensembl	74_37	+1	known	missense	c.862	p.I288V	0.168	pfam_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A4	HGNC	ENSG00000115902				199	0	0	152	65	29.9539
SPRED2	0	genome.wustl.edu	37	2	65540704	65540704	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	65540704	65540704	G	A	SNP	SPRED2	ENST00000356388	human	ensembl	74_37	-1	known	silent	c.1188	p.P396	0.398	pfam_Sprouty	pfam_Sprouty,pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	SPRED2	HGNC	ENSG00000198369				111	0	0	73	22	23.1579
DYSF	0	genome.wustl.edu	37	2	71825835	71825835	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	71825835	71825835	C	T	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	missense	c.3755	p.P1252L	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636				85	0	0	32	24	42.8571
SLC4A5	0	genome.wustl.edu	37	2	74513013	74513013	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	74513013	74513013	C	T	SNP	SLC4A5	ENST00000357822	human	ensembl	74_37	-1	known	silent	c.288	p.E96	1.000	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A5	HGNC	ENSG00000188687				23	0	0	7	12	63.1579
CTNNA2	0	genome.wustl.edu	37	2	80646695	80646695	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	80646695	80646695	T	C	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.1361	p.V454A	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				72	0	0	112	15	11.811
CTNNA2	0	genome.wustl.edu	37	2	80835350	80835350	+	Silent	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	80835350	80835350	T	G	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	silent	c.2439	p.L813	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				41	0	0	85	47	35.6061
ELMOD3	0	genome.wustl.edu	37	2	85617547	85617547	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	85617547	85617547	T	C	SNP	ELMOD3	ENST00000315658	human	ensembl	74_37	+1	known	missense	c.1102	p.S368P	0.000	NULL	pfam_Engulfment_cell_motility_ELMO	-	no_errors	ELMOD3	HGNC	ENSG00000115459				289	1	0.344828	147	80	35.2423
KRCC1	0	genome.wustl.edu	37	2	88327464	88327464	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	88327464	88327464	C	T	SNP	KRCC1	ENST00000347055	human	ensembl	74_37	-1	known	missense	c.619	p.V207I	0.045	NULL	NULL	-	no_errors	KRCC1	HGNC	ENSG00000172086				212	0	0	188	71	27.4131
SEMA4C	0	genome.wustl.edu	37	2	97526833	97526833	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	97526833	97526833	C	G	SNP	SEMA4C	ENST00000305476	human	ensembl	74_37	-1	known	missense	c.2032	p.V678L	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4C	HGNC	ENSG00000168758				58	0	0	36	17	32.0755
ZAP70	0	genome.wustl.edu	37	2	98351851	98351851	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	98351851	98351851	C	T	SNP	ZAP70	ENST00000264972	human	ensembl	74_37	+1	known	silent	c.1221	p.A407	0.159	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ZAP70	HGNC	ENSG00000115085				283	0	0	195	30	13.3333
TMEM131	0	genome.wustl.edu	37	2	98392382	98392382	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	98392382	98392382	T	C	SNP	TMEM131	ENST00000186436	human	ensembl	74_37	-1	known	missense	c.4244	p.D1415G	0.987	NULL	pfam_DUF3651_TMEM131	-	no_errors	TMEM131	HGNC	ENSG00000075568				44	0	0	35	19	35.1852
TASP1	0	genome.wustl.edu	37	20	13539704	13539704	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	13539704	13539704	A	G	SNP	TASP1	ENST00000337743	human	ensembl	74_37	-1	known	missense	c.626	p.V209A	1.000	pfam_Peptidase_T2	pfam_Peptidase_T2	-	no_errors	TASP1	HGNC	ENSG00000089123				113	0	0	154	50	24.5098
TMC2	0	genome.wustl.edu	37	20	2621797	2621797	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	2621797	2621797	G	A	SNP	TMC2	ENST00000358864	human	ensembl	74_37	+1	known	missense	c.2521	p.A841T	0.974	NULL	pfam_TMC	-	no_errors	TMC2	HGNC	ENSG00000149488				247	0	0	142	63	30.7317
HM13	0	genome.wustl.edu	37	20	30155910	30155910	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	30155910	30155910	A	G	SNP	HM13	ENST00000398174	human	ensembl	74_37	+1	known	missense	c.1064	p.H355R	0.997	NULL	pfam_Peptidase_A22B_SPP,smart_Preselin/SPP	-	no_errors	HM13	HGNC	ENSG00000101294				45	0	0	22	13	37.1429
SLC4A11	0	genome.wustl.edu	37	20	3210181	3210181	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	3210181	3210181	T	C	SNP	SLC4A11	ENST00000474451	human	ensembl	74_37	-1	known	missense	c.1604	p.N535S	1.000	NULL	pfam_HCO3_transpt_C,pfam_PTS_EIIA_type-2_dom,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr	-	no_errors	SLC4A11	HGNC	ENSG00000088836				70	0	0	51	7	12.069
CEP250	0	genome.wustl.edu	37	20	34057798	34057798	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	34057798	34057798	C	T	SNP	CEP250	ENST00000397527	human	ensembl	74_37	+1	known	missense	c.935	p.T312I	0.993	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001				42	0	0	16	13	44.8276
SAMHD1	0	genome.wustl.edu	37	20	35539626	35539626	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	35539626	35539626	A	G	SNP	SAMHD1	ENST00000262878	human	ensembl	74_37	-1	known	missense	c.1265	p.L422P	0.985	NULL	pfam_HD_domain,pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,smart_HD/PDEase_dom,pfscan_SAM	-	no_errors	SAMHD1	HGNC	ENSG00000101347				160	0	0	95	48	33.5664
KCNS1	0	genome.wustl.edu	37	20	43726532	43726532	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	43726532	43726532	G	A	SNP	KCNS1	ENST00000306117	human	ensembl	74_37	-1	known	missense	c.881	p.A294V	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNS1	HGNC	ENSG00000124134				17	0	0	8	11	57.8947
SDC4	0	genome.wustl.edu	37	20	43955989	43955989	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	43955989	43955989	C	T	SNP	SDC4	ENST00000372733	human	ensembl	74_37	-1	known	missense	c.512	p.R171H	1.000	pfam_Syndecan/Neurexin_dom,smart_Neurexin-like	pfam_Syndecan/Neurexin_dom,smart_Neurexin-like	-	no_errors	SDC4	HGNC	ENSG00000124145				127	0	0	67	31	31.6327
ATP9A	0	genome.wustl.edu	37	20	50221365	50221365	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	50221365	50221365	C	T	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	missense	c.2998	p.E1000K	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793				37	0	0	21	6	22.2222
ATP9A	0	genome.wustl.edu	37	20	50238695	50238695	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	50238695	50238695	C	A	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	missense	c.2033	p.G678V	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793				177	0	0	110	57	34.1317
ZFP64	0	genome.wustl.edu	37	20	50769044	50769044	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	50769044	50769044	C	T	SNP	ZFP64	ENST00000216923	human	ensembl	74_37	-1	known	missense	c.1687	p.A563T	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP64	HGNC	ENSG00000020256				72	0	0	60	5	7.69231
GNAS	0	genome.wustl.edu	37	20	57428667	57428667	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	57428667	57428667	C	A	SNP	GNAS	ENST00000371100	human	ensembl	74_37	+1	putative	missense	c.347	p.P116H	0.989	NULL	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460				65	0	0	40	14	25.9259
TPTE	0	genome.wustl.edu	37	21	10996110	10996110	+	RNA	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	21	10996110	10996110	T	G	SNP	TPTE	ENST00000415664	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TPTE	HGNC	ENSG00000166157				146	0	0	83	19	18.6275
NCAM2	0	genome.wustl.edu	37	21	22910227	22910227	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	21	22910227	22910227	T	C	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	silent	c.2463	p.I821	0.997	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654				45	0	0	51	5	8.92857
SUSD2	0	genome.wustl.edu	37	22	24583244	24583244	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	24583244	24583244	G	A	SNP	SUSD2	ENST00000358321	human	ensembl	74_37	+1	known	missense	c.1717	p.V573M	0.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_AMOP,pfam_VWF_type-D,pfam_Sushi_SCR_CCP,pfam_Somatomedin_B_dom,superfamily_Sushi_SCR_CCP,superfamily_Ig_E-set,smart_AMOP,smart_VWF_type-D,smart_Sushi_SCR_CCP,pfscan_AMOP,pfscan_Somatomedin_B_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD2	HGNC	ENSG00000099994				58	0	0	43	4	8.51064
POM121L9P	0	genome.wustl.edu	37	22	24659741	24659741	+	RNA	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	24659741	24659741	G	A	SNP	POM121L9P	ENST00000414583	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	POM121L9P	HGNC	ENSG00000128262				27	0	0	24	4	14.2857
MN1	0	genome.wustl.edu	37	22	28196402	28196402	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	28196402	28196402	G	C	SNP	MN1	ENST00000302326	human	ensembl	74_37	-1	known	missense	c.130	p.P44A	0.994	NULL	NULL	-	no_errors	MN1	HGNC	ENSG00000169184				164	1	0.606061	92	38	29.2308
ZNRF3	0	genome.wustl.edu	37	22	29446744	29446744	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	29446744	29446744	C	T	SNP	ZNRF3	ENST00000544604	human	ensembl	74_37	+1	known	nonsense	c.2575	p.R859*	0.001	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF3	HGNC	ENSG00000183579				24	0	0	13	9	40.9091
ASCC2	0	genome.wustl.edu	37	22	30221652	30221652	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	30221652	30221652	C	T	SNP	ASCC2	ENST00000307790	human	ensembl	74_37	-1	known	missense	c.199	p.D67N	1.000	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	ASCC2	HGNC	ENSG00000100325				212	0	0	89	54	37.7622
GALR3	0	genome.wustl.edu	37	22	38220959	38220959	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	38220959	38220959	G	A	SNP	GALR3	ENST00000249041	human	ensembl	74_37	+1	known	missense	c.589	p.V197M	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Galanin_rcpt,prints_GPCR_Rhodpsn,prints_Galnin_3_rcpt	-	no_errors	GALR3	HGNC	ENSG00000128310				9	0	0	1	5	83.3333
ZC3H7B	0	genome.wustl.edu	37	22	41735150	41735150	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	41735150	41735150	C	T	SNP	ZC3H7B	ENST00000351589	human	ensembl	74_37	+1	known	silent	c.771	p.D257	0.756	NULL	pfam_Znf_CCCH,pfam_TPR_1,smart_TPR_repeat,smart_Znf_CCCH,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ZC3H7B	HGNC	ENSG00000100403				185	1	0.537634	87	51	36.9565
SMC1B	0	genome.wustl.edu	37	22	45809402	45809402	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	45809402	45809402	C	T	SNP	SMC1B	ENST00000357450	human	ensembl	74_37	-1	known	missense	c.47	p.R16Q	0.999	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_t-SNARE,smart_SMC_hinge	-	no_errors	SMC1B	HGNC	ENSG00000077935				25	0	0	22	5	18.5185
GRAMD4	0	genome.wustl.edu	37	22	47057337	47057337	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	47057337	47057337	C	T	SNP	GRAMD4	ENST00000361034	human	ensembl	74_37	+1	known	missense	c.464	p.A155V	0.987	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD4	HGNC	ENSG00000075240				98	0	0	63	8	11.2676
ZBED4	0	genome.wustl.edu	37	22	50280283	50280283	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	50280283	50280283	C	T	SNP	ZBED4	ENST00000216268	human	ensembl	74_37	+1	known	silent	c.2973	p.S991	0.999	superfamily_RNaseH-like_dom	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED4	HGNC	ENSG00000100426				30	0	0	19	5	20.8333
TUBGCP6	0	genome.wustl.edu	37	22	50656526	50656526	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	50656526	50656526	G	A	SNP	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	missense	c.5189	p.A1730V	1.000	NULL	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159				110	0	0	54	34	38.6364
TUBGCP6	0	genome.wustl.edu	37	22	50659815	50659815	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	50659815	50659815	C	A	SNP	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	missense	c.2973	p.K991N	0.000	pfam_TUBGCP	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159				32	0	0	28	2	6.66667
FANCD2	0	genome.wustl.edu	37	3	10074520	10074520	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	10074520	10074520	C	T	SNP	FANCD2	ENST00000287647	human	ensembl	74_37	+1	known	silent	c.69	p.T23	0.000	NULL	superfamily_ARM-type_fold	-	no_errors	FANCD2	HGNC	ENSG00000144554				133	0	0	93	18	16.2162
FANCD2	0	genome.wustl.edu	37	3	10108898	10108898	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	10108898	10108898	A	G	SNP	FANCD2	ENST00000287647	human	ensembl	74_37	+1	known	silent	c.2391	p.V797	0.998	NULL	superfamily_ARM-type_fold	-	no_errors	FANCD2	HGNC	ENSG00000144554				48	0	0	35	4	10.2564
CEP97	0	genome.wustl.edu	37	3	101477203	101477203	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	101477203	101477203	C	T	SNP	CEP97	ENST00000327230	human	ensembl	74_37	+1	known	missense	c.1753	p.R585C	1.000	superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CEP97	HGNC	ENSG00000182504				124	0	0	102	33	24.4444
PVRL3	0	genome.wustl.edu	37	3	110837775	110837775	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	110837775	110837775	T	C	SNP	PVRL3	ENST00000485303	human	ensembl	74_37	+1	known	missense	c.775	p.Y259H	1.000	NULL	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	PVRL3	HGNC	ENSG00000177707				70	0	0	55	18	24.6575
ARHGAP31	0	genome.wustl.edu	37	3	119121096	119121096	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	119121096	119121096	C	T	SNP	ARHGAP31	ENST00000264245	human	ensembl	74_37	+1	known	silent	c.1497	p.S499	0.604	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081				174	0	0	102	35	25.5474
PTPLB	0	genome.wustl.edu	37	3	123286614	123286614	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	123286614	123286614	G	A	SNP	PTPLB	ENST00000383657	human	ensembl	74_37	-1	known	missense	c.287	p.A96V	1.000	pfam_Tyr_Pase-like_PTPLA	pfam_Tyr_Pase-like_PTPLA	-	no_errors	PTPLB	HGNC	ENSG00000206527				63	0	0	43	16	27.1186
PLXND1	0	genome.wustl.edu	37	3	129284343	129284343	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	129284343	129284343	C	T	SNP	PLXND1	ENST00000324093	human	ensembl	74_37	-1	known	missense	c.4361	p.G1454D	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXND1	HGNC	ENSG00000004399				88	0	0	37	21	36.2069
PIK3R4	0	genome.wustl.edu	37	3	130447425	130447425	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	130447425	130447425	C	T	SNP	PIK3R4	ENST00000356763	human	ensembl	74_37	-1	known	silent	c.1689	p.R563	0.937	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_WD40_repeat,pfam_HEAT,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_WD40_repeat,pfscan_HEAT_type_2,pfscan_Prot_kinase_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	PIK3R4	HGNC	ENSG00000196455				100	0	0	68	23	25.2747
CPNE4	0	genome.wustl.edu	37	3	131624148	131624148	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	131624148	131624148	C	T	SNP	CPNE4	ENST00000502818	human	ensembl	74_37	-1	known	missense	c.194	p.C65Y	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom	-	no_errors	CPNE4	HGNC	ENSG00000196353				46	0	0	153	18	10.5263
EPHB1	0	genome.wustl.edu	37	3	134851733	134851733	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	134851733	134851733	T	G	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	missense	c.1139	p.V380G	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928				47	0	0	52	6	10.3448
SAMD7	0	genome.wustl.edu	37	3	169642908	169642908	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	169642908	169642908	C	T	SNP	SAMD7	ENST00000335556	human	ensembl	74_37	+1	known	missense	c.274	p.R92W	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD7	HGNC	ENSG00000187033				97	0	0	59	31	34.4444
NAALADL2	0	genome.wustl.edu	37	3	175189442	175189442	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	175189442	175189442	C	A	SNP	NAALADL2	ENST00000454872	human	ensembl	74_37	+1	known	missense	c.1549	p.L517I	1.000	NULL	superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL2	HGNC	ENSG00000177694				20	0	0	25	16	39.0244
CCDC39	0	genome.wustl.edu	37	3	180365973	180365973	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	180365973	180365973	G	C	SNP	CCDC39	ENST00000442201	human	ensembl	74_37	-1	known	missense	c.1342	p.Q448E	1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC39	HGNC	ENSG00000145075				38	0	0	21	7	25
KNG1	0	genome.wustl.edu	37	3	186449380	186449380	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	186449380	186449380	G	A	SNP	KNG1	ENST00000265023	human	ensembl	74_37	+1	known	missense	c.719	p.R240Q	0.000	smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat,prints_Kininogen	-	no_errors	KNG1	HGNC	ENSG00000113889				52	0	0	28	17	37.7778
LINC00969	0	genome.wustl.edu	37	3	195410688	195410688	+	RNA	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	195410688	195410688	G	A	SNP	LINC00969	ENST00000414625	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00969	HGNC	ENSG00000242086				38	0	0	25	4	13.7931
IQCG	0	genome.wustl.edu	37	3	197670673	197670673	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	197670673	197670673	G	A	SNP	IQCG	ENST00000265239	human	ensembl	74_37	-1	known	silent	c.258	p.Y86	0.040	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCG	HGNC	ENSG00000114473				176	0	0	92	39	29.771
TGFBR2	0	genome.wustl.edu	37	3	30713390	30713390	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	30713390	30713390	A	G	SNP	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	missense	c.790	p.T264A	1.000	pirsf_Transform_growth_fac-b_typ-2	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513				61	0	0	57	32	35.9551
CMTM6	0	genome.wustl.edu	37	3	32529529	32529529	+	Splice_Site	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	32529529	32529529	C	A	SNP	CMTM6	ENST00000205636	human	ensembl	74_37	-1	known	splice_site	c.316-1	e3-1	1.000	-	-	-	no_errors	CMTM6	HGNC	ENSG00000091317				34	0	0	31	12	27.907
VILL	0	genome.wustl.edu	37	3	38035802	38035802	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	38035802	38035802	C	T	SNP	VILL	ENST00000283713	human	ensembl	74_37	+1	known	silent	c.186	p.Y62	1.000	pfam_Gelsolin_dom,smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VILL	HGNC	ENSG00000136059				45	0	0	32	13	28.8889
TTC21A	0	genome.wustl.edu	37	3	39179046	39179046	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	39179046	39179046	C	T	SNP	TTC21A	ENST00000301819	human	ensembl	74_37	+1	known	missense	c.3544	p.R1182C	0.960	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21A	HGNC	ENSG00000168026				86	0	0	41	32	43.8356
MYRIP	0	genome.wustl.edu	37	3	40085751	40085751	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	40085751	40085751	C	T	SNP	MYRIP	ENST00000396217	human	ensembl	74_37	+1	known	missense	c.191	p.A64V	1.000	NULL	pfam_Myrip/Melanophilin	-	no_errors	MYRIP	HGNC	ENSG00000170011				55	0	0	66	25	27.4725
RPL14	0	genome.wustl.edu	37	3	40500174	40500174	+	Silent	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	40500174	40500174	C	A	SNP	RPL14	ENST00000338970	human	ensembl	74_37	+1	known	silent	c.147	p.A49	1.000	pfam_Ribosomal_L14	pfam_Ribosomal_L14	-	no_errors	RPL14	HGNC	ENSG00000188846				62	0	0	45	16	26.2295
ULK4	0	genome.wustl.edu	37	3	41607536	41607536	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	41607536	41607536	A	G	SNP	ULK4	ENST00000301831	human	ensembl	74_37	-1	known	missense	c.3206	p.M1069T	1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ULK4	HGNC	ENSG00000168038				74	0	0	35	49	58.3333
CLEC3B	0	genome.wustl.edu	37	3	45077050	45077050	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	45077050	45077050	C	T	SNP	CLEC3B	ENST00000296130	human	ensembl	74_37	+1	known	silent	c.243	p.C81	1.000	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC3B	HGNC	ENSG00000163815				69	0	0	55	9	14.0625
PRKAR2A	0	genome.wustl.edu	37	3	48789703	48789703	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	48789703	48789703	G	A	SNP	PRKAR2A	ENST00000265563	human	ensembl	74_37	-1	known	silent	c.987	p.R329	0.987	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cNMP-bd-like,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	-	no_errors	PRKAR2A	HGNC	ENSG00000114302				126	0	0	49	27	35.5263
RHOA	0	genome.wustl.edu	37	3	49412898	49412898	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	49412898	49412898	T	C	SNP	RHOA	ENST00000418115	human	ensembl	74_37	-1	known	missense	c.125	p.Y42C	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOA	HGNC	ENSG00000067560				131	0	0	50	59	54.1284
SLC38A3	0	genome.wustl.edu	37	3	50253006	50253006	+	RNA	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	50253006	50253006	G	A	SNP	SLC38A3	ENST00000414604	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SLC38A3	HGNC	ENSG00000188338				82	0	0	46	28	37.8378
DOCK3	0	genome.wustl.edu	37	3	51263118	51263118	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	51263118	51263118	G	A	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	missense	c.1291	p.G431R	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				158	0	0	114	60	34.4828
DOCK3	0	genome.wustl.edu	37	3	51392352	51392352	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	51392352	51392352	C	T	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	silent	c.4147	p.L1383	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				164	0	0	168	24	12.5
RBM15B	0	genome.wustl.edu	37	3	51430610	51430610	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	51430610	51430610	C	T	SNP	RBM15B	ENST00000323686	human	ensembl	74_37	+1	known	missense	c.1780	p.R594W	1.000	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	RBM15B	HGNC	ENSG00000179837				108	0	0	55	24	30.3797
STAB1	0	genome.wustl.edu	37	3	52544480	52544480	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	52544480	52544480	G	A	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.2744	p.G915D	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327				42	0	0	26	14	35
CACNA2D3	0	genome.wustl.edu	37	3	54157605	54157605	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	54157605	54157605	C	T	SNP	CACNA2D3	ENST00000288197	human	ensembl	74_37	+1	known	missense	c.188	p.S63F	1.000	NULL	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D3	HGNC	ENSG00000157445				177	0	0	106	32	23.1884
FAM208A	0	genome.wustl.edu	37	3	56658620	56658620	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	56658620	56658620	G	A	SNP	FAM208A	ENST00000355628	human	ensembl	74_37	-1	known	missense	c.4187	p.A1396V	0.996	NULL	pfam_DUF3715	-	no_errors	FAM208A	HGNC	ENSG00000163946				99	0	0	82	30	26.7857
ADAMTS9	0	genome.wustl.edu	37	3	64582637	64582637	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	64582637	64582637	G	A	SNP	ADAMTS9	ENST00000498707	human	ensembl	74_37	-1	known	missense	c.4048	p.R1350W	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS9	HGNC	ENSG00000163638				59	0	0	59	30	33.7079
LRIG1	0	genome.wustl.edu	37	3	66431997	66431997	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	66431997	66431997	G	A	SNP	LRIG1	ENST00000273261	human	ensembl	74_37	-1	known	silent	c.2676	p.C892	0.892	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG1	HGNC	ENSG00000144749				217	0	0	111	70	38.674
MINA	0	genome.wustl.edu	37	3	97677947	97677947	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	97677947	97677947	C	T	SNP	MINA	ENST00000333396	human	ensembl	74_37	-1	known	missense	c.629	p.S210N	1.000	pfam_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,pfscan_JmjC_dom	-	no_errors	MINA	HGNC	ENSG00000170854				64	0	0	52	28	35
C4orf17	0	genome.wustl.edu	37	4	100451003	100451003	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	100451003	100451003	C	A	SNP	C4orf17	ENST00000326581	human	ensembl	74_37	+1	known	missense	c.434	p.P145H	0.003	NULL	NULL	-	no_errors	C4orf17	HGNC	ENSG00000138813				64	0	0	78	25	24.2718
PPP3CA	0	genome.wustl.edu	37	4	101947132	101947132	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	101947132	101947132	G	A	SNP	PPP3CA	ENST00000394854	human	ensembl	74_37	-1	known	missense	c.1456	p.R486C	1.000	NULL	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP3CA	HGNC	ENSG00000138814				154	0	0	138	74	34.9057
SEC24B	0	genome.wustl.edu	37	4	110437688	110437688	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	110437688	110437688	G	A	SNP	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	missense	c.2018	p.R673H	1.000	superfamily_Znf_Sec23_Sec24	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802				43	0	0	50	5	9.09091
ANKRD50	0	genome.wustl.edu	37	4	125591592	125591592	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	125591592	125591592	C	T	SNP	ANKRD50	ENST00000504087	human	ensembl	74_37	-1	known	missense	c.2840	p.R947Q	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD50	HGNC	ENSG00000151458				41	0	0	69	25	26.5957
FAT4	0	genome.wustl.edu	37	4	126328090	126328090	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	126328090	126328090	G	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.5363	p.R1788H	0.954	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				59	0	0	126	57	31.1475
POU4F2	0	genome.wustl.edu	37	4	147561490	147561490	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	147561490	147561490	G	A	SNP	POU4F2	ENST00000281321	human	ensembl	74_37	+1	known	missense	c.760	p.D254N	1.000	pfam_POU_specific,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,pfscan_POU_specific	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F2	HGNC	ENSG00000151615				49	0	0	24	12	33.3333
MFAP3L	0	genome.wustl.edu	37	4	170912625	170912625	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	170912625	170912625	T	C	SNP	MFAP3L	ENST00000361618	human	ensembl	74_37	-1	known	silent	c.1134	p.V378	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MFAP3L	HGNC	ENSG00000198948				129	0	0	108	49	31.2102
VEGFC	0	genome.wustl.edu	37	4	177608669	177608669	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	177608669	177608669	T	G	SNP	VEGFC	ENST00000280193	human	ensembl	74_37	-1	known	missense	c.817	p.T273P	0.000	NULL	pfam_PDGF/VEGF_dom,pfam_CXCXC_repeat,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	VEGFC	HGNC	ENSG00000150630				34	0	0	27	5	15.625
SORBS2	0	genome.wustl.edu	37	4	186545527	186545527	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	186545527	186545527	T	C	SNP	SORBS2	ENST00000284776	human	ensembl	74_37	-1	known	silent	c.1044	p.S348	0.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556				131	0	0	92	22	19.2982
SHISA3	0	genome.wustl.edu	37	4	42403032	42403032	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	42403032	42403032	C	A	SNP	SHISA3	ENST00000319234	human	ensembl	74_37	+1	known	missense	c.281	p.P94H	1.000	NULL	NULL	-	no_errors	SHISA3	HGNC	ENSG00000178343				255	1	0.390625	212	21	9.01288
GABRG1	0	genome.wustl.edu	37	4	46099285	46099285	+	Silent	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	46099285	46099285	T	G	SNP	GABRG1	ENST00000295452	human	ensembl	74_37	-1	known	silent	c.186	p.G62	0.999	superfamily_Neur_chan_lig-bd,prints_GABBAg_rcpt,prints_GABAAa_rcpt	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg1_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG1	HGNC	ENSG00000163285				51	0	0	209	15	6.69643
RASL11B	0	genome.wustl.edu	37	4	53728803	53728803	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	53728803	53728803	C	T	SNP	RASL11B	ENST00000248706	human	ensembl	74_37	+1	known	silent	c.129	p.G43	0.976	pfam_Small_GTPase,pfam_MIRO-like,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RASL11B	HGNC	ENSG00000128045				40	0	0	26	12	31.5789
SRP72	0	genome.wustl.edu	37	4	57366808	57366808	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	57366808	57366808	G	T	SNP	SRP72	ENST00000342756	human	ensembl	74_37	+1	known	missense	c.1785	p.K595N	1.000	NULL	pfam_Signal_recog_part_SRP72_RNA-bd,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SRP72	HGNC	ENSG00000174780				102	0	0	86	13	13.1313
JAKMIP1	0	genome.wustl.edu	37	4	6086667	6086667	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	6086667	6086667	A	G	SNP	JAKMIP1	ENST00000409021	human	ensembl	74_37	-1	known	missense	c.860	p.V287A	1.000	NULL	NULL	-	no_errors	JAKMIP1	HGNC	ENSG00000152969				367	0	0	203	73	26.4493
MFSD7	0	genome.wustl.edu	37	4	677115	677115	+	Silent	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	677115	677115	G	T	SNP	MFSD7	ENST00000404286	human	ensembl	74_37	-1	known	silent	c.1038	p.T346	0.913	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD7	HGNC	ENSG00000169026				127	0	0	97	16	14.1593
UBA6	0	genome.wustl.edu	37	4	68547904	68547904	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	68547904	68547904	T	C	SNP	UBA6	ENST00000322244	human	ensembl	74_37	-1	known	silent	c.162	p.T54	0.999	superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA6	HGNC	ENSG00000033178				50	0	0	61	28	31.4607
HNRNPDL	0	genome.wustl.edu	37	4	83349475	83349475	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	83349475	83349475	C	A	SNP	HNRNPDL	ENST00000295470	human	ensembl	74_37	-1	known	nonsense	c.568	p.G190*	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPDL	HGNC	ENSG00000152795				232	1	0.429185	102	55	35.0318
UNC5C	0	genome.wustl.edu	37	4	96163632	96163632	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	96163632	96163632	G	A	SNP	UNC5C	ENST00000453304	human	ensembl	74_37	-1	known	silent	c.1056	p.C352	0.549	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5C	HGNC	ENSG00000182168				20	0	0	27	10	27.027
ROPN1L	0	genome.wustl.edu	37	5	10442330	10442330	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	10442330	10442330	G	A	SNP	ROPN1L	ENST00000274134	human	ensembl	74_37	+1	known	silent	c.51	p.P17	0.226	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	ROPN1L	HGNC	ENSG00000145491				107	0	0	85	5	5.55556
APC	0	genome.wustl.edu	37	5	112137021	112137021	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	112137021	112137021	C	T	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.775	p.R259W	1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				41	0	0	40	7	14.8936
PDLIM4	0	genome.wustl.edu	37	5	131607852	131607852	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	131607852	131607852	C	A	SNP	PDLIM4	ENST00000253754	human	ensembl	74_37	+1	known	missense	c.923	p.A308E	0.434	pfscan_Znf_LIM	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM4	HGNC	ENSG00000131435				109	0	0	51	32	38.5542
PHF15	0	genome.wustl.edu	37	5	133897939	133897939	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	133897939	133897939	C	T	SNP	PHF15	ENST00000395003	human	ensembl	74_37	+1	known	missense	c.734	p.T245M	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF15	HGNC	ENSG00000043143				186	0	0	100	34	25.3731
PHF15	0	genome.wustl.edu	37	5	133914284	133914284	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	133914284	133914284	G	A	SNP	PHF15	ENST00000395003	human	ensembl	74_37	+1	known	nonsense	c.1650	p.W550*	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF15	HGNC	ENSG00000043143				189	0	0	117	39	25
SIL1	0	genome.wustl.edu	37	5	138282955	138282955	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	138282955	138282955	G	A	SNP	SIL1	ENST00000265195	human	ensembl	74_37	-1	known	missense	c.1237	p.R413C	0.994	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	SIL1	HGNC	ENSG00000120725				79	0	0	56	32	36.3636
PCDHAC1	0	genome.wustl.edu	37	5	140308103	140308103	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	140308103	140308103	C	A	SNP	PCDHAC1	ENST00000253807	human	ensembl	74_37	+1	known	missense	c.1626	p.N542K	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC1	HGNC	ENSG00000248383				193	0	0	152	60	28.3019
PCDHB7	0	genome.wustl.edu	37	5	140554245	140554245	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	140554245	140554245	C	T	SNP	PCDHB7	ENST00000231137	human	ensembl	74_37	+1	known	missense	c.1829	p.T610M	0.982	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212				279	1	0.357143	217	20	8.43882
PCDHB7	0	genome.wustl.edu	37	5	140554319	140554319	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	140554319	140554319	G	A	SNP	PCDHB7	ENST00000231137	human	ensembl	74_37	+1	known	missense	c.1903	p.A635T	0.492	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212				331	0	0	222	29	11.5538
PCDHB16	0	genome.wustl.edu	37	5	140562469	140562469	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	140562469	140562469	A	C	SNP	PCDHB16	ENST00000361016	human	ensembl	74_37	+1	known	missense	c.335	p.N112T	0.993	pfam_Cadherin_N,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963				76	0	0	41	19	31.6667
DPYSL3	0	genome.wustl.edu	37	5	146775259	146775259	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	146775259	146775259	C	A	SNP	DPYSL3	ENST00000398514	human	ensembl	74_37	-1	known	missense	c.1487	p.R496M	1.000	NULL	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL3	HGNC	ENSG00000113657				80	0	0	43	14	24.5614
PDGFRB	0	genome.wustl.edu	37	5	149501535	149501535	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	149501535	149501535	T	C	SNP	PDGFRB	ENST00000261799	human	ensembl	74_37	-1	known	missense	c.2252	p.Y751C	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRB	HGNC	ENSG00000113721				88	0	0	79	5	5.95238
LPCAT1	0	genome.wustl.edu	37	5	1501591	1501591	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	1501591	1501591	G	A	SNP	LPCAT1	ENST00000283415	human	ensembl	74_37	-1	known	missense	c.263	p.P88L	0.996	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	LPCAT1	HGNC	ENSG00000153395				51	0	0	27	13	32.5
ZNF300P1	0	genome.wustl.edu	37	5	150310805	150310805	+	RNA	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	150310805	150310805	G	T	SNP	ZNF300P1	ENST00000520773	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.875	-	-	-	no_errors	ZNF300P1	HGNC	ENSG00000197083				31	0	0	24	6	20
MED7	0	genome.wustl.edu	37	5	156566145	156566145	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	156566145	156566145	G	T	SNP	MED7	ENST00000286317	human	ensembl	74_37	-1	known	missense	c.298	p.P100T	1.000	pfam_Mediatior_Med7	pfam_Mediatior_Med7	-	no_errors	MED7	HGNC	ENSG00000155868				119	0	0	82	31	27.4336
GABRA6	0	genome.wustl.edu	37	5	161113276	161113276	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	161113276	161113276	T	C	SNP	GABRA6	ENST00000274545	human	ensembl	74_37	+1	known	missense	c.79	p.F27L	0.990	prints_GABBAa6_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa6_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA6	HGNC	ENSG00000145863				66	0	0	63	30	32.2581
MYO10	0	genome.wustl.edu	37	5	16694521	16694521	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	16694521	16694521	G	A	SNP	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	silent	c.3759	p.S1253	0.904	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555				269	1	0.37037	147	85	36.6379
FBLL1	0	genome.wustl.edu	37	5	167957475	167957475	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	167957475	167957475	C	T	SNP	FBLL1	ENST00000338333	human	ensembl	74_37	+1	putative	silent	c.966	p.V322	0.984	pfam_Fibrillarin,pirsf_Fibrillarin,prints_Fibrillarin	pfam_Fibrillarin,pirsf_Fibrillarin,prints_Fibrillarin	-	no_errors	FBLL1	HGNC	ENSG00000188573				25	0	0	4	4	50
DOCK2	0	genome.wustl.edu	37	5	169482374	169482374	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	169482374	169482374	C	T	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	missense	c.4279	p.P1427S	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516				67	0	0	60	24	28.5714
FBXW11	0	genome.wustl.edu	37	5	171299942	171299942	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	171299942	171299942	C	T	SNP	FBXW11	ENST00000265094	human	ensembl	74_37	-1	known	missense	c.1211	p.R404Q	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW11	HGNC	ENSG00000072803				33	0	0	37	15	28.8462
DDX41	0	genome.wustl.edu	37	5	176939616	176939616	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	176939616	176939616	G	A	SNP	DDX41	ENST00000507955	human	ensembl	74_37	-1	known	missense	c.1430	p.A477V	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_CCHC,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX41	HGNC	ENSG00000183258				55	0	0	40	13	24.5283
ZNF354A	0	genome.wustl.edu	37	5	178152390	178152390	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	178152390	178152390	G	A	SNP	ZNF354A	ENST00000335815	human	ensembl	74_37	-1	known	silent	c.243	p.G81	0.002	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF354A	HGNC	ENSG00000169131				288	0	0	83	74	47.1338
RICTOR	0	genome.wustl.edu	37	5	38945599	38945599	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	38945599	38945599	G	A	SNP	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	missense	c.4699	p.H1567Y	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327				35	0	0	74	31	29.5238
KIAA0947	0	genome.wustl.edu	37	5	5436579	5436579	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	5436579	5436579	A	G	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.133	p.I45V	1.000	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151				9	0	0	3	7	70
NLN	0	genome.wustl.edu	37	5	65081624	65081624	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	65081624	65081624	A	G	SNP	NLN	ENST00000380985	human	ensembl	74_37	+1	known	missense	c.845	p.Q282R	1.000	pfam_Pept_M3A_M3B	pfam_Pept_M3A_M3B	-	no_errors	NLN	HGNC	ENSG00000123213				58	0	0	69	26	27.3684
MAST4	0	genome.wustl.edu	37	5	66084576	66084576	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	66084576	66084576	G	A	SNP	MAST4	ENST00000404260	human	ensembl	74_37	+1	known	missense	c.596	p.R199H	1.000	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST4	HGNC	ENSG00000069020				44	0	0	45	8	15.0943
MAP1B	0	genome.wustl.edu	37	5	71411594	71411594	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	71411594	71411594	G	T	SNP	MAP1B	ENST00000296755	human	ensembl	74_37	+1	known	missense	c.254	p.R85L	1.000	NULL	pfam_MAP1B_neuraxin	-	no_errors	MAP1B	HGNC	ENSG00000131711				80	0	0	67	27	28.7234
TMEM174	0	genome.wustl.edu	37	5	72469122	72469122	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	72469122	72469122	G	A	SNP	TMEM174	ENST00000296776	human	ensembl	74_37	+1	known	missense	c.52	p.V18I	0.195	NULL	NULL	-	no_errors	TMEM174	HGNC	ENSG00000164325				253	1	0.393701	251	108	30.0836
VCAN	0	genome.wustl.edu	37	5	82816658	82816658	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	82816658	82816658	A	C	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.2533	p.S845R	0.244	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				122	1	0.813008	112	55	32.9341
EDIL3	0	genome.wustl.edu	37	5	83356138	83356138	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	83356138	83356138	T	C	SNP	EDIL3	ENST00000296591	human	ensembl	74_37	-1	known	missense	c.1118	p.D373G	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC	ENSG00000164176				46	0	0	57	27	32.1429
EDIL3	0	genome.wustl.edu	37	5	83360536	83360536	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	83360536	83360536	A	G	SNP	EDIL3	ENST00000296591	human	ensembl	74_37	-1	known	missense	c.935	p.L312P	1.000	superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC	ENSG00000164176				75	0	0	54	23	29.8701
GPR98	0	genome.wustl.edu	37	5	89938835	89938835	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	89938835	89938835	G	T	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.2530	p.A844S	0.001	smart_Calx_beta	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				87	0	0	172	19	9.94764
FAM81B	0	genome.wustl.edu	37	5	94731879	94731879	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	94731879	94731879	A	T	SNP	FAM81B	ENST00000283357	human	ensembl	74_37	+1	known	missense	c.293	p.K98M	1.000	NULL	NULL	-	no_errors	FAM81B	HGNC	ENSG00000153347				35	0	0	34	20	37.037
TMEM14B	0	genome.wustl.edu	37	6	10751370	10751370	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	10751370	10751370	C	T	SNP	TMEM14B	ENST00000379542	human	ensembl	74_37	+1	known	silent	c.105	p.S35	0.822	pfam_UPF0136_TM	pfam_UPF0136_TM	-	no_errors	TMEM14B	HGNC	ENSG00000137210				120	0	0	70	42	37.5
WASF1	0	genome.wustl.edu	37	6	110448716	110448716	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	110448716	110448716	G	A	SNP	WASF1	ENST00000359451	human	ensembl	74_37	-1	known	missense	c.89	p.T30I	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF1	HGNC	ENSG00000112290				30	0	0	28	14	33.3333
NEDD9	0	genome.wustl.edu	37	6	11191046	11191046	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	11191046	11191046	C	T	SNP	NEDD9	ENST00000379446	human	ensembl	74_37	-1	known	silent	c.1056	p.P352	0.000	NULL	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NEDD9	HGNC	ENSG00000111859				150	0	0	99	56	36.129
HS3ST5	0	genome.wustl.edu	37	6	114378702	114378702	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	114378702	114378702	C	T	SNP	HS3ST5	ENST00000312719	human	ensembl	74_37	-1	known	missense	c.760	p.D254N	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST5	HGNC	ENSG00000249853				139	0	0	92	51	35.6643
TRMT11	0	genome.wustl.edu	37	6	126359854	126359854	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	126359854	126359854	C	T	SNP	TRMT11	ENST00000334379	human	ensembl	74_37	+1	known	missense	c.1264	p.R422W	0.996	pirsf_tRNA_mtfrase_TRM11	pfam_RNA_methylase_dom,pirsf_tRNA_mtfrase_TRM11,prints_N12N6_MeTrfase	-	no_errors	TRMT11	HGNC	ENSG00000066651				103	0	0	131	71	35.1485
KIAA1244	0	genome.wustl.edu	37	6	138644821	138644821	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	138644821	138644821	A	T	SNP	KIAA1244	ENST00000251691	human	ensembl	74_37	+1	known	missense	c.4780	p.T1594S	1.000	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold,superfamily_Sec7_dom,smart_Sec7_dom	-	no_errors	KIAA1244	HGNC	ENSG00000112379				135	0	0	79	32	28.8288
ECT2L	0	genome.wustl.edu	37	6	139203986	139203986	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	139203986	139203986	T	C	SNP	ECT2L	ENST00000367682	human	ensembl	74_37	+1	known	missense	c.2006	p.V669A	0.963	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_F-box_dom,superfamily_DH-domain,superfamily_F-box_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ECT2L	HGNC	ENSG00000203734				62	0	0	51	26	33.7662
TXLNB	0	genome.wustl.edu	37	6	139564337	139564337	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	139564337	139564337	C	T	SNP	TXLNB	ENST00000358430	human	ensembl	74_37	-1	known	missense	c.1381	p.A461T	0.729	NULL	pfam_Taxilin_fam	-	no_errors	TXLNB	HGNC	ENSG00000164440				149	0	0	84	32	27.5862
UST	0	genome.wustl.edu	37	6	149068723	149068723	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	149068723	149068723	G	A	SNP	UST	ENST00000367463	human	ensembl	74_37	+1	known	missense	c.157	p.A53T	1.000	NULL	pfam_Sulfotransferase,pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	UST	HGNC	ENSG00000111962				15	0	0	10	6	37.5
SYNE1	0	genome.wustl.edu	37	6	152466684	152466684	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	152466684	152466684	A	G	SNP	SYNE1	ENST00000423061	human	ensembl	74_37	-1	known	missense	c.24770	p.M8257T	0.992	NULL	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				108	0	0	57	16	21.9178
ARID1B	0	genome.wustl.edu	37	6	157511330	157511330	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	157511330	157511330	G	T	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	missense	c.3968	p.G1323V	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618				106	0	0	81	10	10.989
SLC17A3	0	genome.wustl.edu	37	6	25850316	25850316	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	25850316	25850316	C	A	SNP	SLC17A3	ENST00000397060	human	ensembl	74_37	-1	known	missense	c.1083	p.K361N	0.064	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A3	HGNC	ENSG00000124564				100	0	0	94	42	30.8824
SLC17A3	0	genome.wustl.edu	37	6	25855394	25855394	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	25855394	25855394	C	T	SNP	SLC17A3	ENST00000397060	human	ensembl	74_37	-1	known	nonsense	c.690	p.W230*	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A3	HGNC	ENSG00000124564				24	0	0	20	9	31.0345
HLA-C	0	genome.wustl.edu	37	6	31239000	31239000	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	31239000	31239000	A	G	SNP	HLA-C	ENST00000383329	human	ensembl	74_37	-1	known	missense	c.469	p.W157R	0.999	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-C	HGNC	ENSG00000204525				107	0	0	76	11	12.6437
HLA-B	0	genome.wustl.edu	37	6	31324094	31324094	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	31324094	31324094	A	G	SNP	HLA-B	ENST00000412585	human	ensembl	74_37	-1	known	missense	c.469	p.W157R	0.976	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-B	HGNC	ENSG00000234745				35	0	0	24	16	40
SLC44A4	0	genome.wustl.edu	37	6	31833683	31833683	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	31833683	31833683	A	G	SNP	SLC44A4	ENST00000229729	human	ensembl	74_37	-1	known	missense	c.1454	p.F485S	1.000	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A4	HGNC	ENSG00000204385				126	0	0	109	21	16.1538
NOTCH4	0	genome.wustl.edu	37	6	32169918	32169918	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	32169918	32169918	G	A	SNP	NOTCH4	ENST00000375023	human	ensembl	74_37	-1	known	silent	c.3690	p.H1230	0.990	pirsf_Notch,pfam_Notch_dom,superfamily_Notch_dom,smart_Notch_dom,pfscan_Notch_dom	pirsf_Notch,pfam_EG-like_dom,pfam_Ankyrin_rpt,pfam_EGF-like_Ca-bd_dom,pfam_Notch_dom,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_4,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH4	HGNC	ENSG00000204301				192	0	0	112	64	36.3636
COL11A2	0	genome.wustl.edu	37	6	33140867	33140867	+	Silent	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	33140867	33140867	G	T	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	silent	c.2760	p.P920	0.999	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248				40	0	0	20	3	13.0435
COL11A2	0	genome.wustl.edu	37	6	33152008	33152008	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	33152008	33152008	C	T	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	missense	c.1033	p.D345N	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248				158	0	0	82	46	35.9375
ITPR3	0	genome.wustl.edu	37	6	33632704	33632704	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	33632704	33632704	T	C	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	silent	c.1206	p.N402	0.332	pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				52	0	0	32	17	34.6939
USP49	0	genome.wustl.edu	37	6	41766584	41766584	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	41766584	41766584	C	A	SNP	USP49	ENST00000373009	human	ensembl	74_37	-1	known	missense	c.1754	p.R585M	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP49	HGNC	ENSG00000164663				173	1	0.574713	108	44	28.9474
PPP2R5D	0	genome.wustl.edu	37	6	42974334	42974334	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	42974334	42974334	T	C	SNP	PPP2R5D	ENST00000485511	human	ensembl	74_37	+1	known	missense	c.239	p.I80T	1.000	pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5D	HGNC	ENSG00000112640				142	0	0	96	38	28.3582
CUL9	0	genome.wustl.edu	37	6	43182994	43182994	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	43182994	43182994	C	T	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	missense	c.5866	p.P1956S	1.000	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659				168	0	0	102	47	31.5436
TTBK1	0	genome.wustl.edu	37	6	43251219	43251219	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	43251219	43251219	G	A	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	missense	c.2741	p.G914E	0.923	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216				84	0	0	37	26	41.2698
TJAP1	0	genome.wustl.edu	37	6	43473430	43473430	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	43473430	43473430	G	T	SNP	TJAP1	ENST00000372445	human	ensembl	74_37	+1	known	missense	c.1511	p.R504M	0.000	NULL	NULL	-	no_errors	TJAP1	HGNC	ENSG00000137221				71	0	0	26	20	43.4783
TFAP2B	0	genome.wustl.edu	37	6	50807989	50807989	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	50807989	50807989	A	C	SNP	TFAP2B	ENST00000263046	human	ensembl	74_37	+1	known	missense	c.1088	p.K363T	1.000	pfam_TF_AP2_C	pfam_TF_AP2_C,prints_TF_AP2_beta,prints_TF_AP2_C	-	no_errors	TFAP2B	HGNC	ENSG00000008196				165	0	0	85	47	35.6061
CD109	0	genome.wustl.edu	37	6	74528179	74528179	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	74528179	74528179	C	A	SNP	CD109	ENST00000287097	human	ensembl	74_37	+1	known	missense	c.3980	p.P1327H	0.205	pfam_A-macroglobulin_rcpt-bd,superfamily_A-macroglobulin_rcpt-bd	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	CD109	HGNC	ENSG00000156535				21	0	0	46	21	31.3433
BMP6	0	genome.wustl.edu	37	6	7727739	7727739	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	7727739	7727739	G	A	SNP	BMP6	ENST00000283147	human	ensembl	74_37	+1	known	missense	c.551	p.R184H	0.943	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	BMP6	HGNC	ENSG00000153162				26	0	0	15	11	42.3077
TBX18	0	genome.wustl.edu	37	6	85446536	85446536	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	85446536	85446536	G	A	SNP	TBX18	ENST00000369663	human	ensembl	74_37	-1	known	missense	c.1691	p.T564M	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	TBX18	HGNC	ENSG00000112837				120	0	0	94	53	36.0544
RNGTT	0	genome.wustl.edu	37	6	89650829	89650829	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	89650829	89650829	G	T	SNP	RNGTT	ENST00000369485	human	ensembl	74_37	-1	known	missense	c.135	p.F45L	1.000	pirsf_mRNA_cap_enz_bifunc	pfam_mRNA_cap_enzyme,pfam_mRNA_cap_enzyme_C,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_NA-bd_OB-fold,pirsf_mRNA_cap_enz_bifunc,pfscan_Tyr/Dual-sp_Pase	-	no_errors	RNGTT	HGNC	ENSG00000111880				151	0	0	147	15	9.25926
CUX1	0	genome.wustl.edu	37	7	101892233	101892233	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	101892233	101892233	C	A	SNP	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	missense	c.4462	p.R1488S	0.991	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923				20	0	0	10	6	37.5
PPP1R3A	0	genome.wustl.edu	37	7	113519938	113519938	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	113519938	113519938	T	C	SNP	PPP1R3A	ENST00000284601	human	ensembl	74_37	-1	known	silent	c.1209	p.Q403	0.000	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3A	HGNC	ENSG00000154415				84	0	0	192	70	26.7176
AHCYL2	0	genome.wustl.edu	37	7	129029550	129029550	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	129029550	129029550	G	A	SNP	AHCYL2	ENST00000325006	human	ensembl	74_37	+1	known	missense	c.695	p.C232Y	1.000	pfam_Adenosylhomocysteinase,tigrfam_Adenosylhomocysteinase	pfam_Adenosylhomocysteinase,pfam_Ado_hCys_hydrolase_NAD-bd,pfam_D-isomer_2_OHA_DH_NAD-bd,tigrfam_Adenosylhomocysteinase	-	no_errors	AHCYL2	HGNC	ENSG00000158467				62	0	0	38	16	29.6296
SLC13A4	0	genome.wustl.edu	37	7	135384207	135384207	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	135384207	135384207	G	A	SNP	SLC13A4	ENST00000354042	human	ensembl	74_37	-1	known	silent	c.801	p.C267	1.000	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom,pfam_DctM	-	no_errors	SLC13A4	HGNC	ENSG00000164707				103	0	0	65	41	38.6792
ATP6V0A4	0	genome.wustl.edu	37	7	138394386	138394386	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	138394386	138394386	G	A	SNP	ATP6V0A4	ENST00000310018	human	ensembl	74_37	-1	known	silent	c.2412	p.H804	0.701	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	ATP6V0A4	HGNC	ENSG00000105929				459	1	0.217391	368	49	11.7506
BRAF	0	genome.wustl.edu	37	7	140500228	140500228	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	140500228	140500228	G	A	SNP	BRAF	ENST00000288602	human	ensembl	74_37	-1	known	missense	c.914	p.A305V	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	BRAF	HGNC	ENSG00000157764				121	1	0.819672	122	52	29.8851
CASP2	0	genome.wustl.edu	37	7	142997472	142997472	+	Splice_Site	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	142997472	142997472	G	T	SNP	CASP2	ENST00000493642	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	CASP2	HGNC	ENSG00000106144				66	0	0	36	18	33.3333
KMT2C	0	genome.wustl.edu	37	7	151873581	151873581	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	151873581	151873581	C	T	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	missense	c.8957	p.G2986D	0.940	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				81	0	0	46	24	34.2857
NCAPG2	0	genome.wustl.edu	37	7	158444986	158444986	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	158444986	158444986	C	T	SNP	NCAPG2	ENST00000409339	human	ensembl	74_37	-1	known	missense	c.2933	p.R978Q	0.511	NULL	pfam_Condensin2_G2,superfamily_ARM-type_fold	-	no_errors	NCAPG2	HGNC	ENSG00000146918				467	1	0.213675	352	38	9.74359
TAX1BP1	0	genome.wustl.edu	37	7	27868391	27868391	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	27868391	27868391	G	A	SNP	TAX1BP1	ENST00000396319	human	ensembl	74_37	+1	known	silent	c.2313	p.Q771	0.985	NULL	pfam_CoCoA	-	no_errors	TAX1BP1	HGNC	ENSG00000106052				112	0	0	163	64	28.1938
RP9	0	genome.wustl.edu	37	7	33136933	33136933	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	33136933	33136933	C	T	SNP	RP9	ENST00000297157	human	ensembl	74_37	-1	known	missense	c.355	p.E119K	1.000	NULL	NULL	-	no_errors	RP9	HGNC	ENSG00000164610				75	0	0	47	20	29.8507
IGFBP3	0	genome.wustl.edu	37	7	45957023	45957023	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	45957023	45957023	G	T	SNP	IGFBP3	ENST00000381083	human	ensembl	74_37	-1	known	nonsense	c.437	p.S146*	0.597	NULL	pfam_Thyroglobulin_1,pfam_IGFBP-like,superfamily_Thyroglobulin_1,superfamily_Growth_fac_rcpt_N_dom,smart_IGFBP-like,smart_Thyroglobulin_1,prints_IGFBP_1-6_chordata,prints_IGFBP-3,pfscan_Thyroglobulin_1	-	no_errors	IGFBP3	HGNC	ENSG00000146674				99	0	0	47	12	20.339
POM121L12	0	genome.wustl.edu	37	7	53104076	53104076	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	53104076	53104076	C	T	SNP	POM121L12	ENST00000408890	human	ensembl	74_37	+1	known	missense	c.712	p.P238S	0.000	NULL	NULL	-	no_errors	POM121L12	HGNC	ENSG00000221900				85	0	0	53	14	20.8955
RNF216	0	genome.wustl.edu	37	7	5781027	5781027	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	5781027	5781027	C	A	SNP	RNF216	ENST00000389902	human	ensembl	74_37	-1	known	missense	c.621	p.E207D	0.972	NULL	smart_Znf_C6HC	-	no_errors	RNF216	HGNC	ENSG00000011275				329	1	0.30303	222	107	32.5228
USP42	0	genome.wustl.edu	37	7	6180573	6180573	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	6180573	6180573	A	G	SNP	USP42	ENST00000306177	human	ensembl	74_37	+1	known	silent	c.753	p.S251	0.940	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP42	HGNC	ENSG00000106346				53	0	0	32	14	30.4348
ZNF679	0	genome.wustl.edu	37	7	63726383	63726383	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	63726383	63726383	A	G	SNP	ZNF679	ENST00000255746	human	ensembl	74_37	+1	known	silent	c.372	p.Q124	0.011	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF679	HGNC	ENSG00000197123				18	0	0	39	3	7.14286
SNORA22	0	genome.wustl.edu	37	7	65220599	65220599	+	RNA	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	65220599	65220599	A	G	SNP	SNORA22	ENST00000383907	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORA22	HGNC	ENSG00000206634				239	0	0	232	29	11.1111
TBL2	0	genome.wustl.edu	37	7	72992829	72992829	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	72992829	72992829	C	T	SNP	TBL2	ENST00000305632	human	ensembl	74_37	-1	known	silent	c.51	p.G17	0.995	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TBL2	HGNC	ENSG00000106638				9	0	0	16	3	15.7895
MIOS	0	genome.wustl.edu	37	7	7613797	7613797	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	7613797	7613797	G	A	SNP	MIOS	ENST00000340080	human	ensembl	74_37	+1	known	missense	c.1363	p.G455R	1.000	NULL	smart_WD40_repeat	-	no_errors	MIOS	HGNC	ENSG00000164654				83	0	0	62	39	38.6139
CACNA2D1	0	genome.wustl.edu	37	7	81588672	81588672	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	81588672	81588672	A	G	SNP	CACNA2D1	ENST00000356253	human	ensembl	74_37	-1	known	silent	c.3114	p.S1038	1.000	NULL	pfam_VDCC_a2/dsu,pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D1	HGNC	ENSG00000153956				29	0	0	51	22	30.137
SEMA3D	0	genome.wustl.edu	37	7	84649614	84649614	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	84649614	84649614	C	T	SNP	SEMA3D	ENST00000284136	human	ensembl	74_37	-1	known	missense	c.1438	p.V480I	0.999	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3D	HGNC	ENSG00000153993				24	0	0	47	26	35.6164
DLX5	0	genome.wustl.edu	37	7	96651523	96651523	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	96651523	96651523	C	T	SNP	DLX5	ENST00000222598	human	ensembl	74_37	-1	known	missense	c.514	p.A172T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	pfam_Distal-less_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX5	HGNC	ENSG00000105880				260	0	0	154	23	12.9944
SMURF1	0	genome.wustl.edu	37	7	98655080	98655080	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	98655080	98655080	G	A	SNP	SMURF1	ENST00000361125	human	ensembl	74_37	-1	known	silent	c.298	p.L100	1.000	superfamily_C2_dom,smart_C2_dom	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	SMURF1	HGNC	ENSG00000198742				116	0	0	66	24	26.6667
SPDYE3	0	genome.wustl.edu	37	7	99917575	99917575	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	99917575	99917575	C	T	SNP	SPDYE3	ENST00000332397	human	ensembl	74_37	+1	known	missense	c.1612	p.H538Y	0.504	pfam_Cell_cycle_regulatory_Spy1	pfam_Cell_cycle_regulatory_Spy1	-	no_errors	SPDYE3	HGNC	ENSG00000214300				153	0	0	46	51	52.5773
TAF2	0	genome.wustl.edu	37	8	120844733	120844733	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	120844733	120844733	C	T	SNP	TAF2	ENST00000378164	human	ensembl	74_37	-1	known	silent	c.72	p.R24	0.997	NULL	pfam_Peptidase_M1_N,superfamily_ARM-type_fold	-	no_errors	TAF2	HGNC	ENSG00000064313				86	0	0	63	18	22.2222
ADCY8	0	genome.wustl.edu	37	8	132002705	132002705	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	132002705	132002705	T	C	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	silent	c.1044	p.Q348	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				138	0	0	164	60	26.7857
TG	0	genome.wustl.edu	37	8	133894712	133894712	+	Splice_Site	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	133894712	133894712	A	G	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	splice_site	c.746-2	e7-2	1.000	-	-	-	no_errors	TG	HGNC	ENSG00000042832				451	0	0	250	119	32.2493
KCNK9	0	genome.wustl.edu	37	8	140715170	140715170	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	140715170	140715170	G	A	SNP	KCNK9	ENST00000303015	human	ensembl	74_37	-1	known	silent	c.66	p.G22	1.000	pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TASK	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TASK,prints_KCNK9,prints_2pore_dom_K_chnl	-	no_errors	KCNK9	HGNC	ENSG00000169427				29	0	0	26	5	16.129
PLEC	0	genome.wustl.edu	37	8	144990831	144990831	+	Silent	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	144990831	144990831	G	C	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.13569	p.R4523	0.982	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				67	0	0	27	17	38.6364
PLEC	0	genome.wustl.edu	37	8	145003686	145003686	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	145003686	145003686	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.3388	p.R1130W	1.000	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				50	0	0	25	11	30.5556
LRRC14	0	genome.wustl.edu	37	8	145746833	145746833	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	145746833	145746833	C	T	SNP	LRRC14	ENST00000292524	human	ensembl	74_37	+1	known	nonsense	c.1453	p.R485*	0.136	NULL	NULL	-	no_errors	LRRC14	HGNC	ENSG00000160959				48	0	0	34	16	32
HR	0	genome.wustl.edu	37	8	21980053	21980053	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	21980053	21980053	A	G	SNP	HR	ENST00000381418	human	ensembl	74_37	-1	known	missense	c.2074	p.C692R	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	HR	HGNC	ENSG00000168453				35	0	0	29	6	17.1429
REEP4	0	genome.wustl.edu	37	8	21996021	21996021	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	21996021	21996021	C	T	SNP	REEP4	ENST00000523293	human	ensembl	74_37	-1	putative	missense	c.598	p.A200T	0.000	NULL	pfam_TB2_DP1_HVA22	-	no_errors	REEP4	HGNC	ENSG00000168476				137	0	0	77	34	30.6306
RBPMS	0	genome.wustl.edu	37	8	30402104	30402104	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	30402104	30402104	C	T	SNP	RBPMS	ENST00000339877	human	ensembl	74_37	+1	known	missense	c.491	p.P164L	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBPMS	HGNC	ENSG00000157110				212	0	0	162	88	35.2
PRKDC	0	genome.wustl.edu	37	8	48815306	48815306	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	48815306	48815306	C	T	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.3092	p.R1031Q	0.221	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				60	0	0	29	11	27.5
MOS	0	genome.wustl.edu	37	8	57026480	57026480	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	57026480	57026480	G	A	SNP	MOS	ENST00000311923	human	ensembl	74_37	-1	known	missense	c.62	p.A21V	0.155	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MOS	HGNC	ENSG00000172680				36	0	0	36	9	20
CYP7B1	0	genome.wustl.edu	37	8	65528338	65528338	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	65528338	65528338	A	C	SNP	CYP7B1	ENST00000310193	human	ensembl	74_37	-1	known	missense	c.760	p.L254V	0.072	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	-	no_errors	CYP7B1	HGNC	ENSG00000172817				146	0	0	213	103	32.5949
MSC	0	genome.wustl.edu	37	8	72756294	72756294	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	72756294	72756294	C	T	SNP	MSC	ENST00000325509	human	ensembl	74_37	-1	known	silent	c.120	p.S40	0.645	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MSC	HGNC	ENSG00000178860				23	0	0	18	10	35.7143
SPAG11A	0	genome.wustl.edu	37	8	7718335	7718335	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	7718335	7718335	G	A	SNP	SPAG11A	ENST00000326625	human	ensembl	74_37	+1	novel	missense	c.223	p.D75N	0.000	NULL	pfam_Defensin_beta-typ	-	no_errors	SPAG11A	HGNC	ENSG00000178287				21	0	0	16	10	38.4615
ZFHX4	0	genome.wustl.edu	37	8	77775680	77775680	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	77775680	77775680	C	T	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	nonsense	c.9730	p.Q3244*	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				105	0	0	130	74	36.2745
DCAF4L2	0	genome.wustl.edu	37	8	88885305	88885305	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	88885305	88885305	A	C	SNP	DCAF4L2	ENST00000319675	human	ensembl	74_37	-1	known	missense	c.895	p.L299V	0.959	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L2	HGNC	ENSG00000176566				101	0	0	77	7	8.33333
GDF6	0	genome.wustl.edu	37	8	97172784	97172784	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	97172784	97172784	C	T	SNP	GDF6	ENST00000287020	human	ensembl	74_37	-1	known	missense	c.137	p.R46H	1.000	NULL	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF6	HGNC	ENSG00000156466				217	0	0	137	75	35.3774
MTDH	0	genome.wustl.edu	37	8	98703359	98703359	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	98703359	98703359	A	G	SNP	MTDH	ENST00000336273	human	ensembl	74_37	+1	known	missense	c.991	p.T331A	0.041	NULL	NULL	-	no_errors	MTDH	HGNC	ENSG00000147649				114	0	0	99	40	28.777
CORO2A	0	genome.wustl.edu	37	9	100892136	100892136	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	100892136	100892136	C	T	SNP	CORO2A	ENST00000343933	human	ensembl	74_37	-1	known	missense	c.907	p.D303N	0.707	pfam_DUF1900,superfamily_WD40_repeat_dom	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO2A	HGNC	ENSG00000106789				156	0	0	95	36	27.4809
TBC1D2	0	genome.wustl.edu	37	9	101014129	101014129	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	101014129	101014129	G	A	SNP	TBC1D2	ENST00000375066	human	ensembl	74_37	-1	known	missense	c.449	p.A150V	0.007	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2	HGNC	ENSG00000095383				131	0	0	70	39	35.7798
ACTL7B	0	genome.wustl.edu	37	9	111617137	111617137	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	111617137	111617137	C	T	SNP	ACTL7B	ENST00000374667	human	ensembl	74_37	-1	known	silent	c.1074	p.E358	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL7B	HGNC	ENSG00000148156				122	0	0	56	37	39.7849
DFNB31	0	genome.wustl.edu	37	9	117168749	117168749	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	117168749	117168749	G	A	SNP	DFNB31	ENST00000362057	human	ensembl	74_37	-1	known	missense	c.2122	p.P708S	0.226	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	DFNB31	HGNC	ENSG00000095397				86	0	0	78	16	17.0213
PAPPA	0	genome.wustl.edu	37	9	118974189	118974189	+	Nonsense_Mutation	SNP	C	C	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	118974189	118974189	C	G	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	nonsense	c.1896	p.Y632*	1.000	pfam_Peptidase_M43	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752				205	0	0	270	115	29.8701
BRINP1	0	genome.wustl.edu	37	9	121929790	121929790	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	121929790	121929790	G	A	SNP	BRINP1	ENST00000265922	human	ensembl	74_37	-1	known	missense	c.1858	p.R620C	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP1	HGNC	ENSG00000078725				187	0	0	127	62	32.8042
OR5C1	0	genome.wustl.edu	37	9	125552005	125552005	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	125552005	125552005	G	A	SNP	OR5C1	ENST00000373680	human	ensembl	74_37	+1	known	missense	c.794	p.R265H	0.683	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5C1	HGNC	ENSG00000148215				132	0	0	73	45	38.1356
LMX1B	0	genome.wustl.edu	37	9	129377719	129377719	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	129377719	129377719	G	T	SNP	LMX1B	ENST00000355497	human	ensembl	74_37	+1	known	missense	c.197	p.R66L	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LMX1B	HGNC	ENSG00000136944				36	0	0	25	12	32.4324
LMX1B	0	genome.wustl.edu	37	9	129458217	129458217	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	129458217	129458217	G	A	SNP	LMX1B	ENST00000355497	human	ensembl	74_37	+1	known	missense	c.1019	p.S340N	1.000	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LMX1B	HGNC	ENSG00000136944				69	0	0	40	22	35.4839
TOR2A	0	genome.wustl.edu	37	9	130495689	130495689	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	130495689	130495689	G	A	SNP	TOR2A	ENST00000373284	human	ensembl	74_37	-1	known	missense	c.568	p.R190C	1.000	pirsf_Torsin_subgr,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_ClpA/B	pirsf_Torsin_subgr,pfam_Torsin,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_ClpA/B	-	no_errors	TOR2A	HGNC	ENSG00000160404				62	0	0	29	15	34.0909
MPDZ	0	genome.wustl.edu	37	9	13168535	13168535	+	Silent	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	13168535	13168535	G	T	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	silent	c.3084	p.G1028	0.936	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186				115	0	0	186	74	28.4615
SH3GLB2	0	genome.wustl.edu	37	9	131771011	131771011	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	131771011	131771011	G	A	SNP	SH3GLB2	ENST00000372554	human	ensembl	74_37	-1	known	silent	c.1167	p.G389	0.997	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_BAR_dom,pfam_BAR_dom-cont,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain	-	no_errors	SH3GLB2	HGNC	ENSG00000148341				66	0	0	39	20	33.8983
C9orf78	0	genome.wustl.edu	37	9	132591762	132591762	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	132591762	132591762	G	A	SNP	C9orf78	ENST00000372447	human	ensembl	74_37	-1	known	nonsense	c.601	p.Q201*	1.000	pfam_Hep_59	pfam_Hep_59	-	no_errors	C9orf78	HGNC	ENSG00000136819				370	0	0	229	94	29.1022
TTF1	0	genome.wustl.edu	37	9	135277489	135277489	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	135277489	135277489	C	T	SNP	TTF1	ENST00000334270	human	ensembl	74_37	-1	known	silent	c.720	p.S240	0.000	NULL	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	TTF1	HGNC	ENSG00000125482				94	0	0	57	36	38.7097
COL5A1	0	genome.wustl.edu	37	9	137681048	137681048	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	137681048	137681048	C	T	SNP	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	silent	c.2694	p.G898	0.839	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635				49	0	0	26	9	25.7143
NOTCH1	0	genome.wustl.edu	37	9	139412368	139412368	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	139412368	139412368	G	A	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	missense	c.1277	p.A426V	0.997	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400				57	0	0	46	20	30.303
RABL6	0	genome.wustl.edu	37	9	139726289	139726289	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	139726289	139726289	G	A	SNP	RABL6	ENST00000371663	human	ensembl	74_37	+1	known	missense	c.575	p.R192H	1.000	superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,prints_Small_GTPase	-	no_errors	RABL6	HGNC	ENSG00000196642				33	0	0	31	3	8.82353
FBXW5	0	genome.wustl.edu	37	9	139836005	139836005	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	139836005	139836005	G	T	SNP	FBXW5	ENST00000325285	human	ensembl	74_37	-1	known	missense	c.1228	p.L410M	0.999	superfamily_Quinoprot_gluc/sorb_DH	pfam_WD40_repeat,pfam_F-box_dom,superfamily_Quinoprot_gluc/sorb_DH,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FBXW5	HGNC	ENSG00000159069				40	0	0	23	15	39.4737
NELFB	0	genome.wustl.edu	37	9	140161524	140161524	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	140161524	140161524	C	T	SNP	NELFB	ENST00000343053	human	ensembl	74_37	+1	known	silent	c.1224	p.P408	0.001	pfam_COBRA1	pfam_COBRA1	-	no_errors	NELFB	HGNC	ENSG00000188986				131	0	0	60	34	36.1702
DPH7	0	genome.wustl.edu	37	9	140449886	140449886	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	140449886	140449886	G	A	SNP	DPH7	ENST00000277540	human	ensembl	74_37	-1	known	silent	c.1164	p.G388	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DPH7	HGNC	ENSG00000148399				98	0	0	53	40	43.0108
CACNA1B	0	genome.wustl.edu	37	9	140772606	140772606	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	140772606	140772606	C	T	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.221	p.S74L	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				29	0	0	22	4	15.3846
CNTLN	0	genome.wustl.edu	37	9	17332676	17332676	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	17332676	17332676	T	C	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	missense	c.1592	p.L531P	0.975	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459				46	0	0	58	28	32.5581
UNC13B	0	genome.wustl.edu	37	9	35295726	35295726	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	35295726	35295726	G	A	SNP	UNC13B	ENST00000378496	human	ensembl	74_37	+1	known	missense	c.560	p.R187Q	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13B	HGNC	ENSG00000198722				110	1	0.900901	74	40	35.0877
TESK1	0	genome.wustl.edu	37	9	35609504	35609504	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	35609504	35609504	G	A	SNP	TESK1	ENST00000336395	human	ensembl	74_37	+1	known	missense	c.1646	p.R549Q	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK1	HGNC	ENSG00000107140				109	0	0	103	15	12.7119
ALDH1B1	0	genome.wustl.edu	37	9	38395794	38395794	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	38395794	38395794	G	A	SNP	ALDH1B1	ENST00000377698	human	ensembl	74_37	+1	known	missense	c.49	p.A17T	0.001	NULL	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1B1	HGNC	ENSG00000137124				144	1	0.689655	83	38	31.405
AGTPBP1	0	genome.wustl.edu	37	9	88247586	88247586	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	9	88247586	88247586	C	A	SNP	AGTPBP1	ENST00000376109	human	ensembl	74_37	-1	known	missense	c.2042	p.G681V	1.000	NULL	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGTPBP1	HGNC	ENSG00000135049				43	0	0	52	21	28.7671
GPRASP2	0	genome.wustl.edu	37	X	101969939	101969939	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	101969939	101969939	G	A	SNP	GPRASP2	ENST00000332262	human	ensembl	74_37	+1	known	missense	c.142	p.A48T	0.921	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP2	HGNC	ENSG00000158301				266	0	0	217	45	17.1756
NXF3	0	genome.wustl.edu	37	X	102335077	102335077	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	102335077	102335077	T	C	SNP	NXF3	ENST00000395065	human	ensembl	74_37	-1	known	missense	c.995	p.K332R	0.980	NULL	pfam_Tap_RNA-bd,pfam_NTF2,pfscan_Nuclear_transport_factor_2_euk	-	no_errors	NXF3	HGNC	ENSG00000147206				529	0	0	305	153	33.4061
TSC22D3	0	genome.wustl.edu	37	X	107018613	107018613	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	107018613	107018613	C	T	SNP	TSC22D3	ENST00000315660	human	ensembl	74_37	-1	known	missense	c.37	p.G13S	1.000	NULL	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D3	HGNC	ENSG00000157514				25	0	0	11	9	45
CXorf56	0	genome.wustl.edu	37	X	118699280	118699280	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	118699280	118699280	G	C	SNP	CXorf56	ENST00000371594	human	ensembl	74_37	-1	known	missense	c.39	p.D13E	1.000	NULL	NULL	-	no_errors	CXorf56	HGNC	ENSG00000018610				160	0	0	79	38	32.4786
ATP1B4	0	genome.wustl.edu	37	X	119504684	119504684	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	119504684	119504684	G	T	SNP	ATP1B4	ENST00000218008	human	ensembl	74_37	+1	known	missense	c.443	p.R148L	1.000	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	-	no_errors	ATP1B4	HGNC	ENSG00000101892				425	1	0.234742	418	153	26.7951
DCAF12L1	0	genome.wustl.edu	37	X	125686358	125686358	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	125686358	125686358	G	A	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	silent	c.234	p.Y78	0.019	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				104	0	0	81	41	33.6066
ACTRT1	0	genome.wustl.edu	37	X	127185759	127185759	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	127185759	127185759	C	T	SNP	ACTRT1	ENST00000371124	human	ensembl	74_37	-1	known	missense	c.427	p.A143T	0.957	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT1	HGNC	ENSG00000123165				323	1	0.308642	313	111	26.1792
HS6ST2	0	genome.wustl.edu	37	X	132092270	132092270	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	132092270	132092270	C	T	SNP	HS6ST2	ENST00000521489	human	ensembl	74_37	-1	known	missense	c.361	p.A121T	1.000	NULL	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST2	HGNC	ENSG00000171004				20	0	0	6	6	50
MAGEC3	0	genome.wustl.edu	37	X	140984487	140984487	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	140984487	140984487	C	T	SNP	MAGEC3	ENST00000536088	human	ensembl	74_37	+1	known	nonsense	c.49	p.Q17*	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC3	HGNC	ENSG00000165509				202	0	0	140	59	29.6482
SLITRK2	0	genome.wustl.edu	37	X	144904206	144904206	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	144904206	144904206	C	T	SNP	SLITRK2	ENST00000370490	human	ensembl	74_37	+1	known	missense	c.263	p.A88V	0.957	NULL	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK2	HGNC	ENSG00000185985				163	0	0	101	37	26.8116
AFF2	0	genome.wustl.edu	37	X	148037360	148037360	+	Silent	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	148037360	148037360	A	G	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	silent	c.1785	p.K595	0.999	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				211	0	0	196	80	28.9855
ATP2B3	0	genome.wustl.edu	37	X	152818542	152818542	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	152818542	152818542	C	T	SNP	ATP2B3	ENST00000263519	human	ensembl	74_37	+1	known	missense	c.1873	p.R625W	0.847	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_plasma	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B3	HGNC	ENSG00000067842				107	0	0	71	9	11.25
PNCK	0	genome.wustl.edu	37	X	152938109	152938109	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	152938109	152938109	C	T	SNP	PNCK	ENST00000447676	human	ensembl	74_37	-1	known	missense	c.361	p.A121T	0.511	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PNCK	HGNC	ENSG00000130822				124	0	0	91	14	13.3333
PLXNA3	0	genome.wustl.edu	37	X	153698447	153698447	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	153698447	153698447	C	T	SNP	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	silent	c.4923	p.R1641	0.909	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827				140	0	0	74	38	33.9286
F8	0	genome.wustl.edu	37	X	154128211	154128211	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	154128211	154128211	T	C	SNP	F8	ENST00000360256	human	ensembl	74_37	-1	known	missense	c.6203	p.K2068R	0.997	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010				44	0	0	93	13	12.2642
F8	0	genome.wustl.edu	37	X	154194366	154194366	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	154194366	154194366	T	A	SNP	F8	ENST00000360256	human	ensembl	74_37	-1	known	missense	c.1322	p.K441M	0.999	superfamily_Cupredoxin	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010				136	0	0	239	78	24.6057
FUNDC2	0	genome.wustl.edu	37	X	154261743	154261743	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	154261743	154261743	C	T	SNP	FUNDC2	ENST00000369498	human	ensembl	74_37	+1	known	missense	c.199	p.R67C	1.000	NULL	pfam_FUN14	-	no_errors	FUNDC2	HGNC	ENSG00000165775				165	0	0	117	61	34.2697
PHKA2	0	genome.wustl.edu	37	X	18912406	18912406	+	Silent	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	18912406	18912406	C	T	SNP	PHKA2	ENST00000379942	human	ensembl	74_37	-1	known	silent	c.3453	p.S1151	0.005	NULL	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA2	HGNC	ENSG00000044446				97	0	0	52	15	22.3881
KLHL34	0	genome.wustl.edu	37	X	21674117	21674117	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	21674117	21674117	A	T	SNP	KLHL34	ENST00000379499	human	ensembl	74_37	-1	known	missense	c.1790	p.L597H	0.848	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL34	HGNC	ENSG00000185915				25	0	0	17	10	37.037
POLA1	0	genome.wustl.edu	37	X	24745948	24745948	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	24745948	24745948	G	A	SNP	POLA1	ENST00000379068	human	ensembl	74_37	+1	known	silent	c.1581	p.L527	1.000	pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,tigrfam_DNA-dir_DNA_pol_B_pol2	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_Znf_DNA-dir_DNA_pol_B_alpha,pfam_DNA_pol_a_cat_su_N,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	-	no_errors	POLA1	HGNC	ENSG00000101868				99	0	0	74	45	37.8151
FAM47A	0	genome.wustl.edu	37	X	34148626	34148626	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	34148626	34148626	G	C	SNP	FAM47A	ENST00000346193	human	ensembl	74_37	-1	known	missense	c.1770	p.S590R	0.000	NULL	NULL	-	no_errors	FAM47A	HGNC	ENSG00000185448				89	0	0	57	25	30.4878
CHDC2	0	genome.wustl.edu	37	X	36122657	36122657	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	36122657	36122657	T	C	SNP	CHDC2	ENST00000313548	human	ensembl	74_37	+1	known	silent	c.894	p.N298	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain	-	no_errors	CHDC2	HGNC	ENSG00000176034				116	0	0	160	73	31.3305
ZNF630	0	genome.wustl.edu	37	X	47919908	47919908	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	47919908	47919908	T	G	SNP	ZNF630	ENST00000409324	human	ensembl	74_37	-1	known	missense	c.159	p.K53N	0.342	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF630	HGNC	ENSG00000221994				114	0	0	67	29	30.2083
PQBP1	0	genome.wustl.edu	37	X	48759531	48759531	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	48759531	48759531	G	A	SNP	PQBP1	ENST00000218224	human	ensembl	74_37	+1	known	missense	c.314	p.R105Q	0.359	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	PQBP1	HGNC	ENSG00000102103				75	0	0	37	13	26
DGKK	0	genome.wustl.edu	37	X	50130606	50130606	+	RNA	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	50130606	50130606	C	A	SNP	DGKK	ENST00000376025	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DGKK	HGNC	ENSG00000204466				30	0	0	43	17	28.3333
RIBC1	0	genome.wustl.edu	37	X	53457857	53457857	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	53457857	53457857	A	G	SNP	RIBC1	ENST00000375327	human	ensembl	74_37	+1	known	missense	c.1061	p.Q354R	1.000	pfam_RIB43A	pfam_RIB43A	-	no_errors	RIBC1	HGNC	ENSG00000158423				122	0	0	76	32	29.6296
WNK3	0	genome.wustl.edu	37	X	54259313	54259313	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	54259313	54259313	C	A	SNP	WNK3	ENST00000354646	human	ensembl	74_37	-1	known	missense	c.4769	p.R1590I	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK3	HGNC	ENSG00000196632				229	0	0	140	57	28.934
FGD1	0	genome.wustl.edu	37	X	54521707	54521707	+	Silent	SNP	G	G	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	54521707	54521707	G	A	SNP	FGD1	ENST00000375135	human	ensembl	74_37	-1	known	silent	c.159	p.G53	0.123	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD1	HGNC	ENSG00000102302				19	0	0	16	4	20
ZXDB	0	genome.wustl.edu	37	X	57619559	57619559	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	57619559	57619559	C	T	SNP	ZXDB	ENST00000374888	human	ensembl	74_37	+1	known	nonsense	c.1078	p.Q360*	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDB	HGNC	ENSG00000198455				91	0	0	57	23	28.75
APOOL	0	genome.wustl.edu	37	X	84258931	84258931	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	84258931	84258931	A	G	SNP	APOOL	ENST00000373173	human	ensembl	74_37	+1	known	missense	c.13	p.R5G	0.315	NULL	pfam_Apolipoprotein_O	-	no_errors	APOOL	HGNC	ENSG00000155008				205	0	0	159	61	27.7273
DACH2	0	genome.wustl.edu	37	X	85404009	85404009	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	85404009	85404009	C	T	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.385	p.R129W	1.000	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733				107	0	0	73	36	33.0275
KLHL4	0	genome.wustl.edu	37	X	86887421	86887421	+	Silent	SNP	T	T	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	86887421	86887421	T	C	SNP	KLHL4	ENST00000373114	human	ensembl	74_37	+1	known	silent	c.1536	p.H512	1.000	smart_Kelch_1	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL4	HGNC	ENSG00000102271				41	0	0	47	26	35.6164
DBT	0	genome.wustl.edu	37	1	100696362	100696362	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	100696362	100696362	T	-	DEL	DBT	ENST00000370132	human	ensembl	74_37	-1	known	frame_shift_del	c.360	p.K120fs	0.997	pfam_Biotin_lipoyl,superfamily_Single_hybrid_motif,pfscan_Biotin_lipoyl	pfam_2-oxoacid_DH_actylTfrase,pfam_Biotin_lipoyl,pfam_E3-bd,superfamily_Single_hybrid_motif,superfamily_E3-bd,pfscan_Biotin_lipoyl	-	no_errors	DBT	HGNC	ENSG00000137992				46	0	0	61	30	32.967
MXRA8	0	genome.wustl.edu	37	1	1290110	1290110	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	1290110	1290110	G	-	DEL	MXRA8	ENST00000445648	human	ensembl	74_37	-1	known	frame_shift_del	c.901	p.R301fs	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	MXRA8	HGNC	ENSG00000162576				18	0	0	13	6	31.5789
VPS45	0	genome.wustl.edu	37	1	150044231	150044232	+	Splice_Site	INS	-	-	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	150044231	150044232	-	G	INS	VPS45	ENST00000369130	human	ensembl	74_37	+1	known	splice_site_ins	c.229-2_229-1	e3-1	1.000:1.000	-	-	-	no_errors	VPS45	HGNC	ENSG00000136631				119	0	0	88	23	20.7207
SOAT1	0	genome.wustl.edu	37	1	179304653	179304653	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	179304653	179304653	T	-	DEL	SOAT1	ENST00000367619	human	ensembl	74_37	+1	known	frame_shift_del	c.190	p.F65fs	0.997	NULL	pfam_MBOAT_fam	-	no_errors	SOAT1	HGNC	ENSG00000057252				55	0	0	41	21	33.871
CEP350	0	genome.wustl.edu	37	1	180063485	180063486	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	180063485	180063486	-	A	INS	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	frame_shift_ins	c.8245_8246	p.I2751fs	0.267:0.263	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837				35	0	0	20	14	41.1765
EIF4G3	0	genome.wustl.edu	37	1	21268825	21268826	+	Splice_Site	INS	-	-	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	21268825	21268826	-	G	INS	EIF4G3	ENST00000374937	human	ensembl	74_37	-1	known	splice_site_ins	c.674-3_674-2	e8-2	1.000:0.938	-	-	-	no_errors	EIF4G3	HGNC	ENSG00000075151				111	0	0	129	29	18.3544
EIF4G3	0	genome.wustl.edu	37	1	21306905	21306905	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	21306905	21306905	G	-	DEL	EIF4G3	ENST00000374937	human	ensembl	74_37	-1	known	frame_shift_del	c.268	p.Q90fs	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G3	HGNC	ENSG00000075151				81	0	0	46	10	17.8571
KIAA1804	0	genome.wustl.edu	37	1	233511655	233511655	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	233511655	233511655	T	-	DEL	KIAA1804	ENST00000366622	human	ensembl	74_37	+1	known	frame_shift_del	c.7	p.L4fs	0.079	NULL	NULL	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674				80	0	0	49	21	30
HEATR1	0	genome.wustl.edu	37	1	236721620	236721622	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	236721620	236721622	CTC	-	DEL	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	in_frame_del	c.5121_5119	p.E1707in_frame_del	1.000:1.000:1.000	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285				190	0	0	163	14	7.9096
ARID1A	0	genome.wustl.edu	37	1	27088682	27088682	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	27088682	27088682	C	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.2291	p.Q766fs	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				213	0	0	109	40	26.8456
GJB3	0	genome.wustl.edu	37	1	35250494	35250494	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	35250494	35250494	G	-	DEL	GJB3	ENST00000373362	human	ensembl	74_37	+1	known	frame_shift_del	c.131	p.D46fs	1.000	pfam_Connexin_N,smart_Connexin_N	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin31	-	no_errors	GJB3	HGNC	ENSG00000188910				63	0	0	54	18	25
MYCL	0	genome.wustl.edu	37	1	40366987	40366987	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	40366987	40366987	G	-	DEL	MYCL	ENST00000372816	human	ensembl	74_37	-1	known	frame_shift_del	c.120	p.T41fs	1.000	pfam_Tscrpt_reg_Myc_N,prints_Tscrpt_reg_Myc	pfam_Tscrpt_reg_Myc_N,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom,prints_Tscrpt_reg_Myc	-	no_errors	MYCL	HGNC	ENSG00000116990				24	0	0	15	6	28.5714
WDR78	0	genome.wustl.edu	37	1	67390426	67390426	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	67390426	67390426	T	-	DEL	WDR78	ENST00000371026	human	ensembl	74_37	-1	known	frame_shift_del	c.89	p.K30fs	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR78	HGNC	ENSG00000152763				213	0	0	180	14	7.21649
ZZZ3	0	genome.wustl.edu	37	1	78041802	78041804	+	In_Frame_Del	DEL	TCA	TCA	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	TCA	TCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	78041802	78041804	TCA	-	DEL	ZZZ3	ENST00000370801	human	ensembl	74_37	-1	known	in_frame_del	c.2282_2280	p.D761in_frame_del	1.000:1.000:1.000	NULL	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	ZZZ3	HGNC	ENSG00000036549				161	0	0	172	20	10.4167
F3	0	genome.wustl.edu	37	1	94998700	94998700	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	94998700	94998700	A	-	DEL	F3	ENST00000334047	human	ensembl	74_37	-1	known	frame_shift_del	c.537	p.F179fs	0.978	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,pirsf_Tissue_fac/coagulation_fac-3,prints_Tissue_factor	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,pirsf_Tissue_fac/coagulation_fac-3,prints_Tissue_factor	-	no_errors	F3	HGNC	ENSG00000117525				122	0	0	97	7	6.73077
LZIC	0	genome.wustl.edu	37	1	9990460	9990460	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	1	9990460	9990460	T	-	DEL	LZIC	ENST00000541052	human	ensembl	74_37	-1	known	frame_shift_del	c.633	p.K211fs	1.000	pfam_ICAT	pfam_ICAT,superfamily_ICAT	-	no_errors	LZIC	HGNC	ENSG00000162441				609	0	0	456	55	10.7632
C10orf88	0	genome.wustl.edu	37	10	124711510	124711510	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	124711510	124711510	T	-	DEL	C10orf88	ENST00000481909	human	ensembl	74_37	-1	known	frame_shift_del	c.401	p.N134fs	0.704	NULL	NULL	-	no_errors	C10orf88	HGNC	ENSG00000119965				42	0	0	26	8	23.5294
C10orf71	0	genome.wustl.edu	37	10	50530938	50530938	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	50530938	50530938	C	-	DEL	C10orf71	ENST00000374144	human	ensembl	74_37	+1	known	frame_shift_del	c.348	p.P118fs	0.998	NULL	NULL	-	no_errors	C10orf71	HGNC	ENSG00000177354				190	0	0	190	19	9.09091
ANK3	0	genome.wustl.edu	37	10	61831290	61831290	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	61831290	61831290	T	-	DEL	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	frame_shift_del	c.9349	p.I3117fs	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				223	0	0	310	103	24.9395
ANK3	0	genome.wustl.edu	37	10	61994510	61994511	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	61994510	61994511	-	T	INS	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	frame_shift_ins	c.833_832	p.R278fs	1.000:0.997	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				33	0	0	32	6	15.7895
STAMBPL1	0	genome.wustl.edu	37	10	90682161	90682161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	90682161	90682161	C	-	DEL	STAMBPL1	ENST00000371927	human	ensembl	74_37	+1	known	frame_shift_del	c.1222	p.H408fs	1.000	NULL	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	-	no_errors	STAMBPL1	HGNC	ENSG00000138134				36	0	0	64	17	20.9877
HTR7	0	genome.wustl.edu	37	10	92502287	92502288	+	Splice_Site	INS	-	-	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	10	92502287	92502288	-	A	INS	HTR7	ENST00000336152	human	ensembl	74_37	-1	known	splice_site_ins	c.1394-3_1394-2	e4-2	0.999:0.019	-	-	-	no_errors	HTR7	HGNC	ENSG00000148680				23	0	0	42	6	12.5
DDX6	0	genome.wustl.edu	37	11	118629613	118629614	+	Splice_Site	INS	-	-	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	118629613	118629614	-	G	INS	DDX6	ENST00000264018	human	ensembl	74_37	-1	known	splice_site_ins	c.865-3_865-2	e8-2	1.000:0.856	-	-	-	no_errors	DDX6	HGNC	ENSG00000110367				192	0	0	172	49	22.1719
UPK2	0	genome.wustl.edu	37	11	118827661	118827661	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	118827661	118827661	C	-	DEL	UPK2	ENST00000264031	human	ensembl	74_37	+1	known	frame_shift_del	c.145	p.C51fs	0.973	pfam_Uroplakin_II,pirsf_Uroplakin_II	pfam_Uroplakin_II,pirsf_Uroplakin_II	-	no_errors	UPK2	HGNC	ENSG00000110375				103	0	0	81	19	19
ROBO4	0	genome.wustl.edu	37	11	124756593	124756593	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	124756593	124756593	C	-	DEL	ROBO4	ENST00000306534	human	ensembl	74_37	-1	known	frame_shift_del	c.2561	p.G854fs	0.070	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO4	HGNC	ENSG00000154133				65	0	0	37	14	27.451
NCAPD3	0	genome.wustl.edu	37	11	134048586	134048586	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	134048586	134048586	G	-	DEL	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	frame_shift_del	c.2725	p.Q909fs	1.000	superfamily_ARM-type_fold,pirsf_NCAPD3	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503				142	0	0	179	13	6.77083
MUC15	0	genome.wustl.edu	37	11	26587427	26587427	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	26587427	26587427	T	-	DEL	MUC15	ENST00000436318	human	ensembl	74_37	-1	known	frame_shift_del	c.60	p.K20fs	0.000	NULL	NULL	-	no_errors	MUC15	HGNC	ENSG00000169550				34	0	0	59	7	10.6061
OR5T3	0	genome.wustl.edu	37	11	56019856	56019856	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	56019856	56019856	T	-	DEL	OR5T3	ENST00000303059	human	ensembl	74_37	+1	known	frame_shift_del	c.181	p.F62fs	0.236	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T3	HGNC	ENSG00000172489				108	0	0	84	23	21.4953
MS4A8	0	genome.wustl.edu	37	11	60476247	60476247	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	60476247	60476247	G	-	DEL	MS4A8	ENST00000300226	human	ensembl	74_37	+1	known	frame_shift_del	c.527	p.G177fs	0.000	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A8	HGNC	ENSG00000166959				102	0	0	99	11	10
SLC3A2	0	genome.wustl.edu	37	11	62649529	62649529	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	62649529	62649529	A	-	DEL	SLC3A2	ENST00000377892	human	ensembl	74_37	+1	known	frame_shift_del	c.985	p.K331fs	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	-	no_errors	SLC3A2	HGNC	ENSG00000168003				131	0	0	79	26	24.7619
SLC22A6	0	genome.wustl.edu	37	11	62749334	62749334	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	62749334	62749334	A	-	DEL	SLC22A6	ENST00000377871	human	ensembl	74_37	-1	known	frame_shift_del	c.777	p.F259fs	0.986	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A6	HGNC	ENSG00000197901				36	0	0	24	7	22.5806
YIF1A	0	genome.wustl.edu	37	11	66052322	66052323	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	66052322	66052323	-	G	INS	YIF1A	ENST00000471387	human	ensembl	74_37	-1	putative	frame_shift_ins	c.328_327	p.I109fs	0.000:0.002	NULL	pfam_Hrf1	-	no_errors	YIF1A	HGNC	ENSG00000174851				87	0	0	62	6	8.82353
SYTL2	0	genome.wustl.edu	37	11	85435356	85435356	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	85435356	85435356	G	-	DEL	SYTL2	ENST00000359152	human	ensembl	74_37	-1	known	frame_shift_del	c.3716	p.P1239fs	0.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYTL2	HGNC	ENSG00000137501				148	0	0	149	46	23.5897
DENND5A	0	genome.wustl.edu	37	11	9167317	9167317	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	11	9167317	9167317	C	-	DEL	DENND5A	ENST00000328194	human	ensembl	74_37	-1	known	frame_shift_del	c.2903	p.G968fs	1.000	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pfscan_PLAT/LH2_dom	pfam_DENN_dom,pfam_Run,pfam_uDENN_dom,pfam_dDENN_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_Run,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_PLAT/LH2_dom,pfscan_Run	-	no_errors	DENND5A	HGNC	ENSG00000184014				533	0	0	434	133	23.4568
APPL2	0	genome.wustl.edu	37	12	105589059	105589059	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	105589059	105589059	T	-	DEL	APPL2	ENST00000551662	human	ensembl	74_37	-1	known	frame_shift_del	c.1239	p.K413fs	0.836	NULL	pfam_PTB/PI_dom,pfam_Pleckstrin_homology,pfam_PTB,smart_Pleckstrin_homology,smart_PTB/PI_dom,pfscan_Pleckstrin_homology,pfscan_PTB/PI_dom	-	no_errors	APPL2	HGNC	ENSG00000136044				81	0	0	43	19	30.6452
SDSL	0	genome.wustl.edu	37	12	113867031	113867032	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	113867031	113867032	-	C	INS	SDSL	ENST00000345635	human	ensembl	74_37	+1	known	frame_shift_ins	c.281_282	p.E96fs	0.998:0.699	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	-	no_errors	SDSL	HGNC	ENSG00000139410				140	0	0	112	10	8.19672
FBXO21	0	genome.wustl.edu	37	12	117615412	117615412	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	117615412	117615412	T	-	DEL	FBXO21	ENST00000330622	human	ensembl	74_37	-1	known	frame_shift_del	c.505	p.I169fs	1.000	superfamily_F-box_dom	pfam_Hemimethylated_DNA-bd_dom,superfamily_Hemimethylated_DNA-bd_dom,superfamily_F-box_dom,tigrfam_Hemimethylated_DNA-bd_dom	-	no_errors	FBXO21	HGNC	ENSG00000135108				130	0	0	103	29	21.9697
HNF1A	0	genome.wustl.edu	37	12	121432115	121432115	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	121432115	121432115	G	-	DEL	HNF1A	ENST00000257555	human	ensembl	74_37	+1	known	frame_shift_del	c.862	p.P291fs	0.964	pfam_HNF1b_C	pfam_HNF1b_C,pfam_HNF-1_N,pfam_HNF1a_C,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100				21	0	0	13	3	18.75
SBNO1	0	genome.wustl.edu	37	12	123794282	123794283	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	123794282	123794283	-	T	INS	SBNO1	ENST00000420886	human	ensembl	74_37	-1	known	frame_shift_ins	c.3417_3416	p.N1139fs	1.000:1.000	NULL	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697				199	0	0	133	64	32.4873
ULK1	0	genome.wustl.edu	37	12	132402066	132402066	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	132402066	132402066	C	-	DEL	ULK1	ENST00000321867	human	ensembl	74_37	+1	known	frame_shift_del	c.2293	p.Q767fs	0.683	pirsf_Ser/Thr_kin_STPK_Ulk-1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ser/Thr_kinase_C,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK1	HGNC	ENSG00000177169				29	0	0	14	16	53.3333
LARP4	0	genome.wustl.edu	37	12	50848191	50848191	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	50848191	50848191	A	-	DEL	LARP4	ENST00000429001	human	ensembl	74_37	+1	known	frame_shift_del	c.1130	p.N379fs	0.996	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4	HGNC	ENSG00000161813				83	0	0	78	25	24.2718
ITGA7	0	genome.wustl.edu	37	12	56078934	56078934	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	56078934	56078934	G	-	DEL	ITGA7	ENST00000555728	human	ensembl	74_37	-1	known	frame_shift_del	c.3454	p.R1152fs	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA7	HGNC	ENSG00000135424				63	0	0	45	18	28.5714
RBMS2	0	genome.wustl.edu	37	12	56915862	56915864	+	In_Frame_Del	DEL	AAC	AAC	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	AAC	AAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	56915862	56915864	AAC	-	DEL	RBMS2	ENST00000262031	human	ensembl	74_37	+1	known	in_frame_del	c.55_57	p.N20in_frame_del	1.000:1.000:1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMS2	HGNC	ENSG00000076067				205	0	0	159	33	17.1875
MYO1A	0	genome.wustl.edu	37	12	57440668	57440668	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	57440668	57440668	G	-	DEL	MYO1A	ENST00000300119	human	ensembl	74_37	-1	known	frame_shift_del	c.520	p.L174fs	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYO1A	HGNC	ENSG00000166866				74	0	0	78	21	21.2121
R3HDM2	0	genome.wustl.edu	37	12	57652675	57652675	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	57652675	57652675	G	-	DEL	R3HDM2	ENST00000347140	human	ensembl	74_37	-1	known	frame_shift_del	c.2257	p.Q753fs	1.000	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	R3HDM2	HGNC	ENSG00000179912				183	0	0	151	32	17.4863
GLIPR1L2	0	genome.wustl.edu	37	12	75804255	75804255	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	75804255	75804255	A	-	DEL	GLIPR1L2	ENST00000550916	human	ensembl	74_37	+1	known	frame_shift_del	c.276	p.K94fs	0.726	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	GLIPR1L2	HGNC	ENSG00000180481				52	0	0	108	32	22.8571
FAM86FP	0	genome.wustl.edu	37	12	8391319	8391320	+	RNA	INS	-	-	CA			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	8391319	8391320	-	CA	INS	FAM86FP	ENST00000427893	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	FAM86FP	HGNC	ENSG00000164845				83	0	0	71	13	15.4762
CEP290	0	genome.wustl.edu	37	12	88524079	88524079	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	12	88524079	88524079	T	-	DEL	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	frame_shift_del	c.635	p.N212fs	1.000	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707				89	0	0	177	54	23.3766
TMEM255B	0	genome.wustl.edu	37	13	114514859	114514859	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	114514859	114514859	C	-	DEL	TMEM255B	ENST00000375353	human	ensembl	74_37	+1	known	frame_shift_del	c.964	p.Y324fs	0.994	NULL	NULL	-	no_errors	TMEM255B	HGNC	ENSG00000184497				376	0	0	237	49	17.1329
IFT88	0	genome.wustl.edu	37	13	21205180	21205180	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	21205180	21205180	A	-	DEL	IFT88	ENST00000319980	human	ensembl	74_37	+1	known	frame_shift_del	c.1352	p.K453fs	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat,smart_Sel1-like,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFT88	HGNC	ENSG00000032742				51	0	0	67	7	9.45946
AKAP11	0	genome.wustl.edu	37	13	42874486	42874486	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	42874486	42874486	A	-	DEL	AKAP11	ENST00000025301	human	ensembl	74_37	+1	known	frame_shift_del	c.1604	p.N537fs	0.089	NULL	NULL	-	no_errors	AKAP11	HGNC	ENSG00000023516				35	0	0	35	20	36.3636
DIS3	0	genome.wustl.edu	37	13	73337684	73337684	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	73337684	73337684	T	-	DEL	DIS3	ENST00000377767	human	ensembl	74_37	-1	known	frame_shift_del	c.2032	p.I678fs	1.000	NULL	smart_PIN_dom	-	no_errors	DIS3	HGNC	ENSG00000083520				109	0	0	74	33	30.8411
SLAIN1	0	genome.wustl.edu	37	13	78320722	78320722	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	13	78320722	78320722	A	-	DEL	SLAIN1	ENST00000466548	human	ensembl	74_37	+1	known	frame_shift_del	c.924	p.312fs	0.940	NULL	NULL	-	no_errors	SLAIN1	HGNC	ENSG00000139737				47	0	0	119	12	9.16031
INF2	0	genome.wustl.edu	37	14	105174185	105174185	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	105174185	105174185	C	-	DEL	INF2	ENST00000392634	human	ensembl	74_37	+1	known	frame_shift_del	c.1581	p.V530fs	0.011	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485				21	0	0	16	7	30.4348
AHNAK2	0	genome.wustl.edu	37	14	105416562	105416562	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	105416562	105416562	G	-	DEL	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	frame_shift_del	c.5226	p.K1743fs	0.857	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				329	0	0	269	19	6.59722
MYH6	0	genome.wustl.edu	37	14	23874468	23874470	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	23874468	23874470	AGA	-	DEL	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	in_frame_del	c.466_464	p.F155in_frame_del	1.000:1.000:1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616				255	0	0	137	25	15.4321
ARHGAP5	0	genome.wustl.edu	37	14	32562346	32562346	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	32562346	32562346	A	-	DEL	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	frame_shift_del	c.2471	p.R826fs	1.000	NULL	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852				90	0	0	136	18	11.6883
CATSPERB	0	genome.wustl.edu	37	14	92058236	92058236	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	14	92058236	92058236	T	-	DEL	CATSPERB	ENST00000256343	human	ensembl	74_37	-1	known	frame_shift_del	c.2820	p.V941fs	0.980	NULL	superfamily_Sialidases	-	no_errors	CATSPERB	HGNC	ENSG00000133962				205	0	0	138	48	25.8065
MGA	0	genome.wustl.edu	37	15	42000020	42000020	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	42000020	42000020	T	-	DEL	MGA	ENST00000219905	human	ensembl	74_37	+1	known	frame_shift_del	c.2283	p.W763fs	0.984	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				61	0	0	54	5	8.47458
MGA	0	genome.wustl.edu	37	15	42054515	42054516	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	42054515	42054516	-	G	INS	MGA	ENST00000219905	human	ensembl	74_37	+1	known	frame_shift_ins	c.7699_7700	p.K2569fs	0.981:0.989	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				135	0	0	120	21	14.8936
PRTG	0	genome.wustl.edu	37	15	55912892	55912892	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	55912892	55912892	A	-	DEL	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	frame_shift_del	c.3167	p.F1056fs	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	PRTG	HGNC	ENSG00000166450				99	0	0	53	14	20.8955
RNF111	0	genome.wustl.edu	37	15	59376343	59376343	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	59376343	59376343	C	-	DEL	RNF111	ENST00000434298	human	ensembl	74_37	+1	known	frame_shift_del	c.2340	p.P782fs	0.993	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF111	HGNC	ENSG00000157450				67	0	0	88	12	12
THSD4	0	genome.wustl.edu	37	15	71704113	71704113	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	71704113	71704113	C	-	DEL	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	frame_shift_del	c.1103	p.C370fs	0.984	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720				142	0	0	117	9	7.14286
TM6SF1	0	genome.wustl.edu	37	15	83805312	83805312	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	83805312	83805312	T	-	DEL	TM6SF1	ENST00000379386	human	ensembl	74_37	+1	known	frame_shift_del	c.1010	p.L339fs	0.172	pfam_Transmembrane_6/97	pfam_Transmembrane_6/97	-	no_errors	TM6SF1	HGNC	ENSG00000136404				200	0	0	126	75	37.3134
MCTP2	0	genome.wustl.edu	37	15	94927344	94927344	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	15	94927344	94927344	T	-	DEL	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	frame_shift_del	c.1676	p.F560fs	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	MCTP2	HGNC	ENSG00000140563				16	0	0	28	6	17.6471
SLX4	0	genome.wustl.edu	37	16	3647657	3647657	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	3647657	3647657	G	-	DEL	SLX4	ENST00000294008	human	ensembl	74_37	-1	known	frame_shift_del	c.1406	p.P469fs	0.852	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	SLX4	HGNC	ENSG00000188827				297	0	0	182	34	15.7407
CYLD	0	genome.wustl.edu	37	16	50826572	50826572	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	50826572	50826572	T	-	DEL	CYLD	ENST00000311559	human	ensembl	74_37	+1	known	frame_shift_del	c.2306	p.P771fs	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_CAP-Gly_domain,pfam_Peptidase_C19/C67,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain,pfscan_Peptidase_C19/C67	-	no_errors	CYLD	HGNC	ENSG00000083799				13	0	0	16	8	33.3333
RAB40C	0	genome.wustl.edu	37	16	677579	677580	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	677579	677580	-	C	INS	RAB40C	ENST00000248139	human	ensembl	74_37	+1	known	frame_shift_ins	c.803_804	p.Q271fs	1.000:1.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_SOCS_C,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,smart_SOCS_C,pfscan_SOCS_C,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB40C	HGNC	ENSG00000197562				87	0	0	75	15	16.6667
ZC3H18	0	genome.wustl.edu	37	16	88666204	88666204	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	16	88666204	88666204	A	-	DEL	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	frame_shift_del	c.936	p.A315fs	1.000	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545				339	0	0	213	73	25.5245
MPRIP	0	genome.wustl.edu	37	17	17046886	17046886	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	17046886	17046886	C	-	DEL	MPRIP	ENST00000395811	human	ensembl	74_37	+1	known	frame_shift_del	c.1052	p.P353fs	0.999	NULL	pfam_Pleckstrin_homology,superfamily_Ferritin-like_SF,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	MPRIP	HGNC	ENSG00000133030				36	0	0	21	9	30
KIAA0100	0	genome.wustl.edu	37	17	26966334	26966334	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	26966334	26966334	T	-	DEL	KIAA0100	ENST00000528896	human	ensembl	74_37	-1	known	frame_shift_del	c.1228	p.R410fs	0.999	pfam_FMP27_N	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202				199	0	0	108	38	26.0274
C17orf75	0	genome.wustl.edu	37	17	30665238	30665238	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	30665238	30665238	T	-	DEL	C17orf75	ENST00000225805	human	ensembl	74_37	-1	known	frame_shift_del	c.480	p.G161fs	1.000	NULL	NULL	-	no_errors	C17orf75	HGNC	ENSG00000108666				249	0	0	175	65	27.0833
HOXB3	0	genome.wustl.edu	37	17	46627925	46627925	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	46627925	46627925	C	-	DEL	HOXB3	ENST00000311626	human	ensembl	74_37	-1	known	frame_shift_del	c.1067	p.G356fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB3	HGNC	ENSG00000120093				39	0	0	42	6	12.5
ITGA3	0	genome.wustl.edu	37	17	48154742	48154743	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	48154742	48154743	-	C	INS	ITGA3	ENST00000320031	human	ensembl	74_37	+1	known	frame_shift_ins	c.2072_2071	p.G692fs	0.998:0.001	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA3	HGNC	ENSG00000005884				160	0	0	97	33	25.3846
CAMTA2	0	genome.wustl.edu	37	17	4875738	4875738	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	4875738	4875738	G	-	DEL	CAMTA2	ENST00000414043	human	ensembl	74_37	-1	known	frame_shift_del	c.2666	p.P889fs	1.000	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA2	HGNC	ENSG00000108509				40	0	0	47	11	18.9655
ZFP3	0	genome.wustl.edu	37	17	4995923	4995923	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	4995923	4995923	G	-	DEL	ZFP3	ENST00000318833	human	ensembl	74_37	+1	known	frame_shift_del	c.1124	p.N377fs	0.677	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP3	HGNC	ENSG00000180787				115	0	0	66	23	25.8427
TBX4	0	genome.wustl.edu	37	17	59560345	59560345	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	59560345	59560345	C	-	DEL	TBX4	ENST00000393853	human	ensembl	74_37	+1	known	frame_shift_del	c.1109	p.P372fs	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX4	HGNC	ENSG00000121075				63	0	0	44	14	24.1379
AXIN2	0	genome.wustl.edu	37	17	63532568	63532568	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	63532568	63532568	G	-	DEL	AXIN2	ENST00000307078	human	ensembl	74_37	-1	known	frame_shift_del	c.2011	p.R671fs	1.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN2	HGNC	ENSG00000168646				109	0	0	52	22	29.7297
CEP112	0	genome.wustl.edu	37	17	64059082	64059082	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	64059082	64059082	T	-	DEL	CEP112	ENST00000392769	human	ensembl	74_37	-1	known	frame_shift_del	c.1073	p.K358fs	1.000	NULL	superfamily_t-SNARE	-	no_errors	CEP112	HGNC	ENSG00000154240				63	0	0	48	25	34.2466
ABCA6	0	genome.wustl.edu	37	17	67125767	67125767	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	67125767	67125767	A	-	DEL	ABCA6	ENST00000284425	human	ensembl	74_37	-1	known	frame_shift_del	c.917	p.L306fs	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA6	HGNC	ENSG00000154262				40	0	0	105	43	29.0541
YBX2	0	genome.wustl.edu	37	17	7193637	7193637	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	17	7193637	7193637	G	-	DEL	YBX2	ENST00000007699	human	ensembl	74_37	-1	known	frame_shift_del	c.677	p.P226fs	0.892	NULL	pfam_CSP_DNA-bd,superfamily_NA-bd_OB-fold,smart_Cold_shock_prot,prints_CSP_DNA-bd	-	no_errors	YBX2	HGNC	ENSG00000006047				437	0	0	288	48	14.2857
ENSG00000252258	0	genome.wustl.edu	37	18	3025533	3025533	+	RNA	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	3025533	3025533	A	-	DEL	ENSG00000252258	ENST00000516449	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORA70	RFAM	ENSG00000252258				36	0	0	26	7	21.2121
CCDC178	0	genome.wustl.edu	37	18	30873148	30873148	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	30873148	30873148	T	-	DEL	CCDC178	ENST00000406524	human	ensembl	74_37	-1	known	frame_shift_del	c.1151	p.N384fs	0.004	NULL	NULL	-	no_errors	CCDC178	HGNC	ENSG00000166960				56	0	0	50	17	25.3731
MOCOS	0	genome.wustl.edu	37	18	33848647	33848647	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	18	33848647	33848647	A	-	DEL	MOCOS	ENST00000261326	human	ensembl	74_37	+1	known	frame_shift_del	c.2666	p.*889fs	0.029	NULL	pfam_MOSC_N,pfam_MoCF_Sase_C,pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,superfamily_Pyrv_Knase-like_insert_dom	-	no_errors	MOCOS	HGNC	ENSG00000075643				126	0	0	88	43	32.8244
ZNF564	0	genome.wustl.edu	37	19	12637603	12637604	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	12637603	12637604	AT	-	DEL	ZNF564	ENST00000339282	human	ensembl	74_37	-1	known	frame_shift_del	c.1319_1318	p.M440fs	0.010:0.018	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF564	HGNC	ENSG00000249709				463	0	0	325	123	27.4554
CD22	0	genome.wustl.edu	37	19	35832248	35832249	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	35832248	35832249	-	C	INS	CD22	ENST00000085219	human	ensembl	74_37	+1	known	frame_shift_ins	c.1510_1511	p.R506fs	1.000:1.000	pfscan_Ig-like_dom	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD22	HGNC	ENSG00000012124				61	0	0	35	15	30
LMTK3	0	genome.wustl.edu	37	19	49000740	49000740	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	49000740	49000740	C	-	DEL	LMTK3	ENST00000270238	human	ensembl	74_37	-1	known	frame_shift_del	c.3673	p.D1225fs	1.000	smart_Ser/Thr_dual-sp_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC	ENSG00000142235				87	0	0	52	9	14.7541
ZSCAN5B	0	genome.wustl.edu	37	19	56701679	56701680	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	56701679	56701680	-	G	INS	ZSCAN5B	ENST00000358992	human	ensembl	74_37	-1	known	frame_shift_ins	c.1005_1004	p.G336fs	0.000:0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5B	HGNC	ENSG00000197213				258	0	0	158	52	24.7619
OR7E24	0	genome.wustl.edu	37	19	9361741	9361741	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	19	9361741	9361741	T	-	DEL	OR7E24	ENST00000456448	human	ensembl	74_37	+1	known	frame_shift_del	c.22	p.F11fs	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7E24	HGNC	ENSG00000237521				13	0	0	5	14	73.6842
GLI2	0	genome.wustl.edu	37	2	121708914	121708914	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	121708914	121708914	C	-	DEL	GLI2	ENST00000361492	human	ensembl	74_37	+1	known	frame_shift_del	c.350	p.H119fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047				194	0	0	133	28	17.3913
IWS1	0	genome.wustl.edu	37	2	128238676	128238676	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	128238676	128238676	T	-	DEL	IWS1	ENST00000295321	human	ensembl	74_37	-1	known	frame_shift_del	c.2404	p.S802fs	1.000	NULL	pfam_TFIIS_N,superfamily_TFIIS_N	-	no_errors	IWS1	HGNC	ENSG00000163166				179	0	0	150	16	9.63855
COBLL1	0	genome.wustl.edu	37	2	165551296	165551296	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	165551296	165551296	A	-	DEL	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	frame_shift_del	c.2921	p.L974fs	0.972	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438				39	0	0	57	9	13.6364
DNAH7	0	genome.wustl.edu	37	2	196788374	196788374	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	196788374	196788374	T	-	DEL	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	frame_shift_del	c.3770	p.N1257fs	0.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997				68	0	0	73	29	28.4314
STK11IP	0	genome.wustl.edu	37	2	220478946	220478946	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	220478946	220478946	C	-	DEL	STK11IP	ENST00000456909	human	ensembl	74_37	+1	novel	frame_shift_del	c.2780	p.Q929fs	1.000	NULL	NULL	-	no_errors	STK11IP	HGNC	ENSG00000144589				101	0	0	64	13	16.8831
ATRAID	0	genome.wustl.edu	37	2	27436083	27436083	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	27436083	27436083	A	-	DEL	ATRAID	ENST00000380171	human	ensembl	74_37	+1	known	frame_shift_del	c.303	p.V103fs	0.439	NULL	pfscan_EG-like_dom	-	no_errors	ATRAID	HGNC	ENSG00000138085				264	0	0	188	21	10.0478
TTC31	0	genome.wustl.edu	37	2	74718259	74718259	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	74718259	74718259	A	-	DEL	TTC31	ENST00000442235	human	ensembl	74_37	+1	known	frame_shift_del	c.119	p.K41fs	1.000	NULL	NULL	-	no_errors	TTC31	HGNC	ENSG00000115282				173	0	0	128	56	30.4348
SEMA4C	0	genome.wustl.edu	37	2	97526589	97526589	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	97526589	97526589	G	-	DEL	SEMA4C	ENST00000305476	human	ensembl	74_37	-1	known	frame_shift_del	c.2276	p.P759fs	0.998	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4C	HGNC	ENSG00000168758				144	0	0	85	27	24.1071
TAF1B	0	genome.wustl.edu	37	2	9989571	9989571	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	2	9989571	9989571	A	-	DEL	TAF1B	ENST00000263663	human	ensembl	74_37	+1	known	frame_shift_del	c.187	p.N66fs	0.991	NULL	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750				11	0	0	5	4	44.4444
LPIN3	0	genome.wustl.edu	37	20	39977298	39977299	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	39977298	39977299	-	G	INS	LPIN3	ENST00000373257	human	ensembl	74_37	+1	known	frame_shift_ins	c.328_329	p.L113fs	0.845:0.917	NULL	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,smart_LNS2	-	no_errors	LPIN3	HGNC	ENSG00000132793				110	0	0	77	17	18.0851
SALL4	0	genome.wustl.edu	37	20	50400983	50400983	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	50400983	50400983	C	-	DEL	SALL4	ENST00000217086	human	ensembl	74_37	-1	known	frame_shift_del	c.2983	p.V995fs	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL4	HGNC	ENSG00000101115				119	0	0	78	33	29.7297
TSHZ2	0	genome.wustl.edu	37	20	51872444	51872445	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	51872444	51872445	-	C	INS	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	frame_shift_ins	c.2447_2448	p.M819fs	1.000:1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463				129	0	0	115	24	17.2662
DNAJC5	0	genome.wustl.edu	37	20	62562334	62562334	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	20	62562334	62562334	C	-	DEL	DNAJC5	ENST00000360864	human	ensembl	74_37	+1	known	frame_shift_del	c.452	p.E153fs	1.000	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC5	HGNC	ENSG00000101152				105	0	0	60	17	22.0779
NRIP1	0	genome.wustl.edu	37	21	16338330	16338330	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	21	16338330	16338330	T	-	DEL	NRIP1	ENST00000318948	human	ensembl	74_37	-1	known	frame_shift_del	c.2184	p.E729fs	0.998	NULL	NULL	-	no_errors	NRIP1	HGNC	ENSG00000180530				53	0	0	53	26	32.9114
BACE2	0	genome.wustl.edu	37	21	42540489	42540489	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	21	42540489	42540489	C	-	DEL	BACE2	ENST00000330333	human	ensembl	74_37	+1	known	frame_shift_del	c.299	p.P102fs	1.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Pept_A1_BACE,prints_Pept_A1_BACE2,prints_Aspartic_peptidase,prints_Pept_A1_BACE1	-	no_errors	BACE2	HGNC	ENSG00000182240				21	0	0	21	3	12.5
BPIFC	0	genome.wustl.edu	37	22	32831829	32831829	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	32831829	32831829	G	-	DEL	BPIFC	ENST00000300399	human	ensembl	74_37	-1	known	frame_shift_del	c.786	p.F263fs	0.148	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFC	HGNC	ENSG00000184459				114	0	0	80	22	21.5686
DDX17	0	genome.wustl.edu	37	22	38895455	38895455	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	38895455	38895455	C	-	DEL	DDX17	ENST00000396821	human	ensembl	74_37	-1	known	frame_shift_del	c.488	p.G163fs	0.996	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX17	HGNC	ENSG00000100201				186	0	0	136	42	23.5955
CELSR1	0	genome.wustl.edu	37	22	46760471	46760471	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	46760471	46760471	G	-	DEL	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	frame_shift_del	c.8717	p.P2906fs	0.005	NULL	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				107	0	0	61	15	19.7368
ADM2	0	genome.wustl.edu	37	22	50921041	50921041	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	22	50921041	50921041	C	-	DEL	ADM2	ENST00000395737	human	ensembl	74_37	+1	known	frame_shift_del	c.156	p.A54fs	0.000	NULL	pfam_Procalcitonin/adrenomedullin	-	no_errors	ADM2	HGNC	ENSG00000128165				17	0	0	6	3	33.3333
ZBTB20	0	genome.wustl.edu	37	3	114057967	114057967	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	114057967	114057967	G	-	DEL	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	frame_shift_del	c.2111	p.P704fs	0.991	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				96	0	0	79	23	22.549
RNF13	0	genome.wustl.edu	37	3	149678568	149678568	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	149678568	149678568	A	-	DEL	RNF13	ENST00000344229	human	ensembl	74_37	+1	known	frame_shift_del	c.823	p.T277fs	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF13	HGNC	ENSG00000082996				83	0	0	91	29	24.1667
ATP13A5	0	genome.wustl.edu	37	3	193028483	193028483	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	193028483	193028483	A	-	DEL	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	frame_shift_del	c.2469	p.F823fs	1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527				40	0	0	65	22	25.2874
RNF168	0	genome.wustl.edu	37	3	196199236	196199237	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	196199236	196199237	-	T	INS	RNF168	ENST00000318037	human	ensembl	74_37	-1	known	frame_shift_ins	c.1170_1169	p.N390fs	0.035:0.034	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF168	HGNC	ENSG00000163961				274	0	0	155	60	27.907
GOLGA4	0	genome.wustl.edu	37	3	37367468	37367468	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	37367468	37367468	A	-	DEL	GOLGA4	ENST00000361924	human	ensembl	74_37	+1	known	frame_shift_del	c.4091	p.V1367fs	0.993	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,superfamily_t-SNARE,superfamily_Prefoldin,smart_GRIP,pfscan_GRIP	-	no_errors	GOLGA4	HGNC	ENSG00000144674				31	0	0	29	19	39.5833
APEH	0	genome.wustl.edu	37	3	49719319	49719319	+	Splice_Site	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	49719319	49719319	G	-	DEL	APEH	ENST00000296456	human	ensembl	74_37	+1	known	splice_site_del	c.1523-1	e17-1	1.000	-	-	-	no_errors	APEH	HGNC	ENSG00000164062				223	0	0	154	56	26.6667
MAPKAPK3	0	genome.wustl.edu	37	3	50655080	50655080	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	50655080	50655080	G	-	DEL	MAPKAPK3	ENST00000357955	human	ensembl	74_37	+1	known	frame_shift_del	c.84	p.R31fs	0.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPKAPK3	HGNC	ENSG00000114738				151	0	0	108	9	7.69231
CCDC66	0	genome.wustl.edu	37	3	56600689	56600690	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	3	56600689	56600690	-	A	INS	CCDC66	ENST00000394672	human	ensembl	74_37	+1	known	frame_shift_ins	c.612_613	p.T206fs	0.062:0.530	NULL	NULL	-	no_errors	CCDC66	HGNC	ENSG00000180376				86	0	0	51	16	23.8806
ANK2	0	genome.wustl.edu	37	4	114278230	114278230	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	114278230	114278230	A	-	DEL	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	frame_shift_del	c.8456	p.D2821fs	0.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				77	0	0	165	21	11.2903
QRFPR	0	genome.wustl.edu	37	4	122250740	122250740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	122250740	122250740	T	-	DEL	QRFPR	ENST00000394427	human	ensembl	74_37	-1	known	frame_shift_del	c.1025	p.N342fs	1.000	pfam_7TM_GPCR_olfarory/Srsx,prints_NPY_rcpt,prints_NPFF_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	QRFPR	HGNC	ENSG00000186867				67	0	0	48	27	36
KIAA1109	0	genome.wustl.edu	37	4	123165029	123165029	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	123165029	123165029	A	-	DEL	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	frame_shift_del	c.4763	p.K1590fs	0.999	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688				53	0	0	98	13	11.7117
LRBA	0	genome.wustl.edu	37	4	151774054	151774054	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	151774054	151774054	A	-	DEL	LRBA	ENST00000357115	human	ensembl	74_37	-1	known	frame_shift_del	c.2808	p.F936fs	0.992	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC	ENSG00000198589				71	0	0	82	10	10.8696
TENM3	0	genome.wustl.edu	37	4	183673077	183673077	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	183673077	183673077	A	-	DEL	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	frame_shift_del	c.3754	p.N1253fs	0.994	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336				79	0	0	55	37	40.2174
FAM193A	0	genome.wustl.edu	37	4	2661592	2661593	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	2661592	2661593	-	C	INS	FAM193A	ENST00000324666	human	ensembl	74_37	+1	known	frame_shift_ins	c.683_684	p.V231fs	1.000:0.995	NULL	NULL	-	no_errors	FAM193A	HGNC	ENSG00000125386				232	0	0	181	14	7.17949
UGT2A3	0	genome.wustl.edu	37	4	69817137	69817137	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	69817137	69817137	A	-	DEL	UGT2A3	ENST00000251566	human	ensembl	74_37	-1	known	frame_shift_del	c.342	p.F114fs	0.001	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2A3	HGNC	ENSG00000135220				15	0	0	73	13	15.1163
RUFY3	0	genome.wustl.edu	37	4	71660543	71660546	+	Frame_Shift_Del	DEL	AAAG	AAAG	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	AAAG	AAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	71660543	71660546	AAAG	-	DEL	RUFY3	ENST00000381006	human	ensembl	74_37	+1	novel	frame_shift_del	c.1489_1492	p.R499fs	1.000:1.000:1.000:0.999	NULL	pfam_Run,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,smart_Run,smart_Znf_FYVE,pfscan_Run	-	no_errors	RUFY3	HGNC	ENSG00000018189				152	0	0	127	53	29.4444
C4orf22	0	genome.wustl.edu	37	4	81791254	81791254	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	81791254	81791254	A	-	DEL	C4orf22	ENST00000508675	human	ensembl	74_37	+1	known	frame_shift_del	c.492	p.R167fs	0.769	NULL	NULL	-	no_errors	C4orf22	HGNC	ENSG00000197826				166	1	0.598802	145	41	22.043
PLAC8	0	genome.wustl.edu	37	4	84026050	84026050	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	84026050	84026050	G	-	DEL	PLAC8	ENST00000311507	human	ensembl	74_37	-1	known	frame_shift_del	c.242	p.P81fs	1.000	pfam_Uncharacterised_Cys-rich,tigrfam_Uncharacterised_Cys-rich	pfam_Uncharacterised_Cys-rich,tigrfam_Uncharacterised_Cys-rich	-	no_errors	PLAC8	HGNC	ENSG00000145287				170	0	0	127	44	25.731
BMPR1B	0	genome.wustl.edu	37	4	96025645	96025646	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	96025645	96025646	-	C	INS	BMPR1B	ENST00000440890	human	ensembl	74_37	+1	known	frame_shift_ins	c.160_161	p.R56fs	1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	BMPR1B	HGNC	ENSG00000138696				65	0	0	79	30	27.5229
STPG2	0	genome.wustl.edu	37	4	99027105	99027105	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	4	99027105	99027105	T	-	DEL	STPG2	ENST00000295268	human	ensembl	74_37	-1	known	frame_shift_del	c.611	p.K204fs	1.000	NULL	NULL	-	no_errors	STPG2	HGNC	ENSG00000163116				13	0	0	18	6	25
PAM	0	genome.wustl.edu	37	5	102309949	102309949	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	102309949	102309949	A	-	DEL	PAM	ENST00000304400	human	ensembl	74_37	+1	known	frame_shift_del	c.1292	p.K433fs	1.000	NULL	pfam_NHL_repeat,pfam_Cu2_ascorb_mOase_N,superfamily_PHM/PNGase_F_dom,pfscan_NHL_repeat_subgr,prints_Pep_amidat_mOase	-	no_errors	PAM	HGNC	ENSG00000145730				65	0	0	104	37	26.2411
CCDC112	0	genome.wustl.edu	37	5	114606950	114606952	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	114606950	114606952	CTT	-	DEL	CCDC112	ENST00000379611	human	ensembl	74_37	-1	known	in_frame_del	c.1292_1290	p.R431in_frame_del	1.000:1.000:1.000	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC112	HGNC	ENSG00000164221				104	0	0	137	47	25.5435
KIF3A	0	genome.wustl.edu	37	5	132039275	132039276	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	132039275	132039276	-	T	INS	KIF3A	ENST00000378735	human	ensembl	74_37	-1	known	frame_shift_ins	c.1274_1273	p.M425fs	1.000:1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF3A	HGNC	ENSG00000131437				40	0	0	35	8	18.6047
GUSBP1	0	genome.wustl.edu	37	5	21462041	21462042	+	RNA	INS	-	-	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	21462041	21462042	-	A	INS	GUSBP1	ENST00000509649	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.025:0.042	-	-	-	no_errors	GUSBP1	HGNC	ENSG00000183666				25	0	0	13	8	38.0952
IL7R	0	genome.wustl.edu	37	5	35867540	35867541	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	35867540	35867541	-	A	INS	IL7R	ENST00000303115	human	ensembl	74_37	+1	known	frame_shift_ins	c.354_355	p.I120fs	0.290:0.165	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3	-	no_errors	IL7R	HGNC	ENSG00000168685				76	0	0	105	26	19.8473
SKIV2L2	0	genome.wustl.edu	37	5	54696236	54696236	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	54696236	54696236	A	-	DEL	SKIV2L2	ENST00000230640	human	ensembl	74_37	+1	known	frame_shift_del	c.2468	p.A826fs	1.000	pirsf_RNA_helicase_ATP-dep_SK12/DOB1	pfam_DSH_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pirsf_RNA_helicase_ATP-dep_SK12/DOB1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SKIV2L2	HGNC	ENSG00000039123				67	0	0	72	6	7.69231
MIER3	0	genome.wustl.edu	37	5	56233480	56233481	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	56233480	56233481	GA	-	DEL	MIER3	ENST00000381199	human	ensembl	74_37	-1	known	frame_shift_del	c.361_360	p.Q121fs	1.000:0.775	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	MIER3	HGNC	ENSG00000155545				130	0	0	98	44	30.9859
CWC27	0	genome.wustl.edu	37	5	64181326	64181326	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	64181326	64181326	A	-	DEL	CWC27	ENST00000381070	human	ensembl	74_37	+1	known	frame_shift_del	c.995	p.V335fs	1.000	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	CWC27	HGNC	ENSG00000153015				20	0	0	23	6	20.6897
ZNF366	0	genome.wustl.edu	37	5	71756154	71756154	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	5	71756154	71756154	G	-	DEL	ZNF366	ENST00000318442	human	ensembl	74_37	-1	known	frame_shift_del	c.1170	p.I391fs	0.994	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF366	HGNC	ENSG00000178175				56	0	0	38	13	25.4902
KIAA1919	0	genome.wustl.edu	37	6	111587360	111587361	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	111587360	111587361	-	T	INS	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	frame_shift_ins	c.595_596	p.C202fs	0.469:0.469	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214				77	0	0	89	6	6.31579
ATXN1	0	genome.wustl.edu	37	6	16328093	16328093	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	16328093	16328093	G	-	DEL	ATXN1	ENST00000244769	human	ensembl	74_37	-1	known	frame_shift_del	c.449	p.P150fs	0.997	NULL	pfam_Ataxin-1_HBP1,pfam_Capicua_tscrpt_rep_mod,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1	HGNC	ENSG00000124788				181	0	0	127	35	21.6049
KIF13A	0	genome.wustl.edu	37	6	17788022	17788023	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	17788022	17788023	-	T	INS	KIF13A	ENST00000259711	human	ensembl	74_37	-1	known	frame_shift_ins	c.3346_3345	p.V1115fs	1.000:1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13A	HGNC	ENSG00000137177				222	0	0	126	63	33.3333
MDC1	0	genome.wustl.edu	37	6	30671005	30671005	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	30671005	30671005	C	-	DEL	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	frame_shift_del	c.5741	p.G1914fs	0.994	superfamily_BRCT_dom,pfscan_BRCT_dom	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337				90	0	0	59	8	11.9403
HLA-B	0	genome.wustl.edu	37	6	31323363	31323363	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	31323363	31323363	G	-	DEL	HLA-B	ENST00000412585	human	ensembl	74_37	-1	known	frame_shift_del	c.626	p.P209fs	0.142	pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-B	HGNC	ENSG00000234745				301	0	0	200	51	20.3187
TAP1	0	genome.wustl.edu	37	6	32821048	32821048	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	32821048	32821048	G	-	DEL	TAP1	ENST00000354258	human	ensembl	74_37	-1	known	frame_shift_del	c.546	p.S184fs	0.000	tigrfam_Ag_transporter2	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_ABC_B2,tigrfam_Ag_transporter2	-	no_errors	TAP1	HGNC	ENSG00000168394				12	0	0	8	3	27.2727
ICK	0	genome.wustl.edu	37	6	52878581	52878581	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	52878581	52878581	G	-	DEL	ICK	ENST00000350082	human	ensembl	74_37	-1	known	frame_shift_del	c.1031	p.P344fs	0.195	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ICK	HGNC	ENSG00000112144				197	0	0	128	48	27.2727
BAI3	0	genome.wustl.edu	37	6	69348994	69348994	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	69348994	69348994	A	-	DEL	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	frame_shift_del	c.427	p.E146fs	1.000	pfscan_CUB_dom	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				77	0	0	85	40	32
CASP8AP2	0	genome.wustl.edu	37	6	90576391	90576391	+	RNA	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	6	90576391	90576391	A	-	DEL	CASP8AP2	ENST00000237177	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CASP8AP2	HGNC	ENSG00000118412				23	0	0	18	7	28
PLOD3	0	genome.wustl.edu	37	7	100855927	100855927	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	100855927	100855927	G	-	DEL	PLOD3	ENST00000223127	human	ensembl	74_37	-1	known	frame_shift_del	c.889	p.R297fs	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397				102	0	0	66	10	13.1579
TMEM168	0	genome.wustl.edu	37	7	112424190	112424191	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	112424190	112424191	-	A	INS	TMEM168	ENST00000312814	human	ensembl	74_37	-1	known	frame_shift_ins	c.691_690	p.I230fs	1.000:1.000	NULL	superfamily_ConA-like_lec_gl_sf	-	no_errors	TMEM168	HGNC	ENSG00000146802				106	0	0	135	35	20.5882
TSGA13	0	genome.wustl.edu	37	7	130357652	130357652	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	130357652	130357652	T	-	DEL	TSGA13	ENST00000356588	human	ensembl	74_37	-1	known	frame_shift_del	c.452	p.K151fs	0.011	NULL	NULL	-	no_errors	TSGA13	HGNC	ENSG00000213265				112	0	0	85	26	23.4234
DENND2A	0	genome.wustl.edu	37	7	140273783	140273783	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	140273783	140273783	A	-	DEL	DENND2A	ENST00000275884	human	ensembl	74_37	-1	known	frame_shift_del	c.1271	p.F424fs	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2A	HGNC	ENSG00000146966				319	0	0	215	77	26.3699
ELMO1	0	genome.wustl.edu	37	7	37355558	37355559	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	37355558	37355559	-	T	INS	ELMO1	ENST00000310758	human	ensembl	74_37	-1	known	frame_shift_ins	c.85_84	p.P28fs	0.998:0.923	NULL	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849				208	0	0	162	26	13.8298
C7orf63	0	genome.wustl.edu	37	7	89939466	89939466	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	89939466	89939466	A	-	DEL	C7orf63	ENST00000389297	human	ensembl	74_37	+1	known	frame_shift_del	c.2740	p.K915fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	C7orf63	HGNC	ENSG00000105792				88	0	0	131	49	27.2222
PPP1R9A	0	genome.wustl.edu	37	7	94539504	94539504	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	7	94539504	94539504	T	-	DEL	PPP1R9A	ENST00000289495	human	ensembl	74_37	+1	known	frame_shift_del	c.79	p.Q28fs	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,pfam_PDZ,superfamily_PDZ,superfamily_SAM/pointed,superfamily_Smac_DIABLO-like,smart_PDZ,smart_SAM,pfscan_PDZ,pfscan_SAM	-	no_errors	PPP1R9A	HGNC	ENSG00000158528				51	0	0	58	19	24.6753
MTMR9	0	genome.wustl.edu	37	8	11162509	11162509	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	11162509	11162509	A	-	DEL	MTMR9	ENST00000221086	human	ensembl	74_37	+1	known	frame_shift_del	c.577	p.N195fs	0.997	pfam_Myotubularin-like_Pase_dom	pfam_Myotubularin-like_Pase_dom	-	no_errors	MTMR9	HGNC	ENSG00000104643				50	0	0	56	18	24.3243
CPSF1	0	genome.wustl.edu	37	8	145620377	145620377	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	145620377	145620377	G	-	DEL	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	frame_shift_del	c.3208	p.Q1070fs	0.993	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894				61	0	0	30	11	26.8293
PRKDC	0	genome.wustl.edu	37	8	48845618	48845618	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	48845618	48845618	C	-	DEL	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	frame_shift_del	c.1738	p.D580fs	1.000	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				16	0	0	13	10	43.4783
PLAG1	0	genome.wustl.edu	37	8	57078932	57078932	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	57078932	57078932	G	-	DEL	PLAG1	ENST00000316981	human	ensembl	74_37	-1	known	frame_shift_del	c.1373	p.P458fs	0.414	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PLAG1	HGNC	ENSG00000181690				161	0	0	248	23	8.48708
MCPH1	0	genome.wustl.edu	37	8	6302639	6302639	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	6302639	6302639	A	-	DEL	MCPH1	ENST00000344683	human	ensembl	74_37	+1	known	frame_shift_del	c.1396	p.T468fs	0.010	pfam_Microcephalin	pfam_Microcephalin,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom,prints_BRCA1	-	no_errors	MCPH1	HGNC	ENSG00000147316				134	0	0	91	31	25.4098
PREX2	0	genome.wustl.edu	37	8	68992721	68992721	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	68992721	68992721	T	-	DEL	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	frame_shift_del	c.1686	p.S565fs	0.015	smart_DEP_dom,pfscan_DEP_dom	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889				94	0	0	93	22	19.1304
SLCO5A1	0	genome.wustl.edu	37	8	70617403	70617403	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	8	70617403	70617403	T	-	DEL	SLCO5A1	ENST00000260126	human	ensembl	74_37	-1	known	frame_shift_del	c.1485	p.K495fs	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO5A1	HGNC	ENSG00000137571				81	0	0	88	28	24.1379
TCEAL6	0	genome.wustl.edu	37	X	101396280	101396281	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	101396280	101396281	-	T	INS	TCEAL6	ENST00000372773	human	ensembl	74_37	-1	known	frame_shift_ins	c.24_23	p.N8fs	0.103:0.079	pfam_TF_A-like/BEX-like	pfam_TF_A-like/BEX-like	-	no_errors	TCEAL6	HGNC	ENSG00000204071				95	0	0	63	24	27.5862
NKAP	0	genome.wustl.edu	37	X	119072752	119072753	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	119072752	119072753	TC	-	DEL	NKAP	ENST00000371410	human	ensembl	74_37	-1	known	frame_shift_del	c.408_407	p.R136fs	0.996:1.000	NULL	pfam_DUF926	-	no_errors	NKAP	HGNC	ENSG00000101882				248	0	0	180	30	14.2857
FLNA	0	genome.wustl.edu	37	X	153577261	153577261	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	153577261	153577261	C	-	DEL	FLNA	ENST00000369850	human	ensembl	74_37	-1	known	frame_shift_del	c.7900	p.D2634fs	0.997	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924				168	0	0	103	33	24.2647
GYG2	0	genome.wustl.edu	37	X	2779579	2779580	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	2779579	2779580	-	G	INS	GYG2	ENST00000381163	human	ensembl	74_37	+1	known	frame_shift_ins	c.947_948	p.P319fs	0.000:0.000	NULL	pfam_Glyco_trans_8	-	no_errors	GYG2	HGNC	ENSG00000056998				80	0	0	57	9	13.6364
DMD	0	genome.wustl.edu	37	X	31198546	31198546	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	31198546	31198546	A	-	DEL	DMD	ENST00000357033	human	ensembl	74_37	-1	known	frame_shift_del	c.10027	p.S3343fs	1.000	pfam_Znf_ZZ,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_Znf_ZZ	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				92	0	0	136	42	23.5955
DMD	0	genome.wustl.edu	37	X	32366647	32366648	+	Splice_Site	INS	-	-	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	32366647	32366648	-	A	INS	DMD	ENST00000357033	human	ensembl	74_37	-1	known	splice_site_ins	c.5326-3_5326-2	e38-2	1.000:1.000	-	-	-	no_errors	DMD	HGNC	ENSG00000198947				21	0	0	26	11	29.7297
ALAS2	0	genome.wustl.edu	37	X	55052384	55052384	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	55052384	55052384	C	-	DEL	ALAS2	ENST00000330807	human	ensembl	74_37	-1	known	frame_shift_del	c.50	p.G17fs	0.016	pfam_5aminolev_synth_preseq	pfam_Aminotransferase_I/II,pfam_5aminolev_synth_preseq,pfam_Aminotrans_V/Cys_dSase,pfam_Cys/Met-Metab_PyrdxlP-dep_enz,superfamily_PyrdxlP-dep_Trfase,tigrfam_4pyrrol_synth_NH2levulA_synth	-	no_errors	ALAS2	HGNC	ENSG00000158578				57	0	0	72	14	16.2791
ZMYM3	0	genome.wustl.edu	37	X	70468355	70468355	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	70468355	70468355	C	-	DEL	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	frame_shift_del	c.1763	p.G588fs	1.000	pfam_Znf_MYM	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130				35	0	0	26	7	21.2121
XIST	0	genome.wustl.edu	37	X	73071979	73071980	+	RNA	INS	-	-	A			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	73071979	73071980	-	A	INS	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.349:0.285	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				19	0	0	13	7	35
RPS6KA6	0	genome.wustl.edu	37	X	83352796	83352796	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	83352796	83352796	A	-	DEL	RPS6KA6	ENST00000262752	human	ensembl	74_37	-1	known	frame_shift_del	c.1837	p.Y613fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA6	HGNC	ENSG00000072133				193	0	0	188	56	22.9508
PCDH19	0	genome.wustl.edu	37	X	99662505	99662505	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4465-01A-01D-1158-08	TCGA-CG-4465-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6a4d2322-4237-4711-81fa-af35e6172e7a	13f23952-b672-4ba2-a98f-33a96de06f95	X	99662505	99662505	G	-	DEL	PCDH19	ENST00000373034	human	ensembl	74_37	-1	known	frame_shift_del	c.1091	p.P364fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH19	HGNC	ENSG00000165194				144	0	0	114	7	5.78512
