Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
MTOR	0	genome.wustl.edu	37	1	11181417	11181417	+	Silent	SNP	C	C	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	11181417	11181417	C	A	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	silent	c.6819	p.P2273	0.939	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793				195	0	0	71	6	7.79221
BCL2L15	0	genome.wustl.edu	37	1	114429946	114429946	+	Silent	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	114429946	114429946	G	A	SNP	BCL2L15	ENST00000393316	human	ensembl	74_37	-1	known	silent	c.52	p.L18	0.022	NULL	NULL	-	no_errors	BCL2L15	HGNC	ENSG00000188761				237	0	0	140	9	6.04027
FLG	0	genome.wustl.edu	37	1	152286817	152286817	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	152286817	152286817	T	G	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.545	p.K182T	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				228	0	0	116	37	24.183
PVRL4	0	genome.wustl.edu	37	1	161043088	161043088	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	161043088	161043088	G	A	SNP	PVRL4	ENST00000368012	human	ensembl	74_37	-1	known	missense	c.1235	p.P412L	1.000	NULL	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PVRL4	HGNC	ENSG00000143217				71	0	0	28	8	22.2222
PRDX6	0	genome.wustl.edu	37	1	173457025	173457025	+	RNA	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	173457025	173457025	G	A	SNP	PRDX6	ENST00000470017	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.038	-	-	-	no_errors	PRDX6	HGNC	ENSG00000117592				113	0	0	40	11	21.5686
MUL1	0	genome.wustl.edu	37	1	20827537	20827537	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	20827537	20827537	C	T	SNP	MUL1	ENST00000264198	human	ensembl	74_37	-1	known	silent	c.705	p.S235	0.017	pfam_MULAN	pfam_MULAN,pfscan_Znf_RING	-	no_errors	MUL1	HGNC	ENSG00000090432				143	0	0	76	19	20
ACTN2	0	genome.wustl.edu	37	1	236850010	236850010	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	236850010	236850010	G	A	SNP	ACTN2	ENST00000366578	human	ensembl	74_37	+1	known	missense	c.37	p.V13M	1.000	superfamily_CH-domain	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN2	HGNC	ENSG00000077522				41	0	0	29	12	29.2683
EXO5	0	genome.wustl.edu	37	1	40981216	40981216	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	40981216	40981216	G	C	SNP	EXO5	ENST00000296380	human	ensembl	74_37	+1	known	missense	c.1000	p.G334R	1.000	pfam_EXOV	pfam_EXOV	-	no_errors	EXO5	HGNC	ENSG00000164002				110	0	0	65	4	5.7971
ZSWIM5	0	genome.wustl.edu	37	1	45501806	45501806	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	45501806	45501806	C	T	SNP	ZSWIM5	ENST00000359600	human	ensembl	74_37	-1	known	missense	c.2060	p.R687H	1.000	NULL	pfscan_Znf_SWIM	-	no_errors	ZSWIM5	HGNC	ENSG00000162415				121	0	0	77	17	18.0851
LURAP1	0	genome.wustl.edu	37	1	46685674	46685674	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	46685674	46685674	G	A	SNP	LURAP1	ENST00000371980	human	ensembl	74_37	+1	known	missense	c.502	p.E168K	0.007	NULL	NULL	-	no_errors	LURAP1	HGNC	ENSG00000171357				167	0	0	68	23	25.2747
UPF2	0	genome.wustl.edu	37	10	11971960	11971960	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	10	11971960	11971960	C	T	SNP	UPF2	ENST00000356352	human	ensembl	74_37	-1	known	missense	c.3713	p.R1238H	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Up-fram_suppressor-2,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	UPF2	HGNC	ENSG00000151461				245	0	0	111	27	19.5652
TIAL1	0	genome.wustl.edu	37	10	121339500	121339500	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	10	121339500	121339500	T	C	SNP	TIAL1	ENST00000369093	human	ensembl	74_37	-1	known	missense	c.445	p.M149V	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TIAL1	HGNC	ENSG00000151923				129	0	0	82	15	15.4639
FGFR2	0	genome.wustl.edu	37	10	123274809	123274809	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	10	123274809	123274809	G	T	SNP	FGFR2	ENST00000457416	human	ensembl	74_37	-1	known	missense	c.1112	p.T371K	0.008	pirsf_FGF_rcpt_fam	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468				179	0	0	110	24	17.9104
EIF3M	0	genome.wustl.edu	37	11	32610588	32610588	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	11	32610588	32610588	G	C	SNP	EIF3M	ENST00000531120	human	ensembl	74_37	+1	known	missense	c.345	p.K115N	1.000	superfamily_ARM-type_fold	pfam_PCI_dom,superfamily_ARM-type_fold,smart_PCI_dom	-	no_errors	EIF3M	HGNC	ENSG00000149100				165	0	0	51	13	20.3125
UBQLNL	0	genome.wustl.edu	37	11	5537612	5537612	+	Silent	SNP	C	C	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	11	5537612	5537612	C	A	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	silent	c.60	p.L20	0.001	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518				213	0	0	89	34	27.6423
AMOTL1	0	genome.wustl.edu	37	11	94602566	94602566	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	11	94602566	94602566	C	T	SNP	AMOTL1	ENST00000433060	human	ensembl	74_37	+1	known	missense	c.2692	p.R898W	0.845	NULL	pfam_Angiomotin_C,prints_Angiomotin	-	no_errors	AMOTL1	HGNC	ENSG00000166025				20	0	0	13	4	23.5294
JRKL	0	genome.wustl.edu	37	11	96124155	96124155	+	Silent	SNP	A	A	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	11	96124155	96124155	A	G	SNP	JRKL	ENST00000332349	human	ensembl	74_37	+1	known	silent	c.342	p.G114	0.901	pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	JRKL	HGNC	ENSG00000183340				303	0	0	122	49	28.655
TMEM119	0	genome.wustl.edu	37	12	108985349	108985349	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	12	108985349	108985349	C	T	SNP	TMEM119	ENST00000392806	human	ensembl	74_37	-1	known	missense	c.811	p.E271K	0.001	NULL	NULL	-	no_errors	TMEM119	HGNC	ENSG00000183160				278	0	0	157	30	16.0428
GOLGA3	0	genome.wustl.edu	37	12	133398686	133398686	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	12	133398686	133398686	C	T	SNP	GOLGA3	ENST00000204726	human	ensembl	74_37	-1	known	missense	c.29	p.G10D	0.012	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615				123	0	0	54	16	22.8571
ARID2	0	genome.wustl.edu	37	12	46245192	46245192	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	12	46245192	46245192	C	T	SNP	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	nonsense	c.3286	p.Q1096*	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079				170	1	0.584795	93	27	22.5
ITGB7	0	genome.wustl.edu	37	12	53586645	53586645	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	12	53586645	53586645	C	T	SNP	ITGB7	ENST00000267082	human	ensembl	74_37	-1	known	silent	c.1776	p.T592	0.416	pirsf_Integrin_bsu,pfam_EGF_extracell	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_EGF_extracell,superfamily_Plexin-like_fold,superfamily_Integrin_bsu_tail,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB7	HGNC	ENSG00000139626				111	0	0	31	4	11.4286
MYF5	0	genome.wustl.edu	37	12	81111227	81111227	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	12	81111227	81111227	C	T	SNP	MYF5	ENST00000228644	human	ensembl	74_37	+1	known	missense	c.385	p.R129C	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_Basic,pfam_Myf5,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYF5	HGNC	ENSG00000111049				280	1	0.355872	137	57	29.3814
UGGT2	0	genome.wustl.edu	37	13	96592282	96592282	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	13	96592282	96592282	G	A	SNP	UGGT2	ENST00000376747	human	ensembl	74_37	-1	known	nonsense	c.1741	p.Q581*	0.011	NULL	pfam_UDP-g_GGtrans,pfam_Glyco_trans_8	-	no_errors	UGGT2	HGNC	ENSG00000102595				233	0	0	65	15	18.75
BNIP3P1	0	genome.wustl.edu	37	14	28734470	28734470	+	RNA	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	14	28734470	28734470	G	A	SNP	BNIP3P1	ENST00000550043	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	BNIP3P1	HGNC	ENSG00000197358				20	0	0	9	3	25
NPAS3	0	genome.wustl.edu	37	14	34270057	34270057	+	Silent	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	14	34270057	34270057	G	A	SNP	NPAS3	ENST00000356141	human	ensembl	74_37	+1	known	silent	c.2544	p.A848	1.000	NULL	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS3	HGNC	ENSG00000151322				15	0	0	5	4	44.4444
PAX9	0	genome.wustl.edu	37	14	37132608	37132608	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	14	37132608	37132608	G	A	SNP	PAX9	ENST00000361487	human	ensembl	74_37	+1	known	missense	c.511	p.A171T	0.981	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX9	HGNC	ENSG00000198807				82	0	0	39	9	18.75
SERPINA1	0	genome.wustl.edu	37	14	94844974	94844974	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	14	94844974	94844974	C	T	SNP	SERPINA1	ENST00000355814	human	ensembl	74_37	-1	known	missense	c.1069	p.V357M	0.001	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA1	HGNC	ENSG00000197249				73	0	0	27	5	15.625
HAPLN3	0	genome.wustl.edu	37	15	89424648	89424648	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	15	89424648	89424648	G	T	SNP	HAPLN3	ENST00000359595	human	ensembl	74_37	-1	known	missense	c.433	p.R145S	1.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like_dom,prints_Link	-	no_errors	HAPLN3	HGNC	ENSG00000140511				138	0	0	97	34	25.9542
SCNN1B	0	genome.wustl.edu	37	16	23382763	23382763	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	16	23382763	23382763	A	G	SNP	SCNN1B	ENST00000307331	human	ensembl	74_37	+1	known	missense	c.1159	p.T387A	1.000	pfam_Na+channel_ASC,tigrfam_EnaC	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	SCNN1B	HGNC	ENSG00000168447				76	0	0	28	4	12.5
CDH1	0	genome.wustl.edu	37	16	68842627	68842627	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	16	68842627	68842627	T	A	SNP	CDH1	ENST00000261769	human	ensembl	74_37	+1	known	missense	c.563	p.V188D	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068				97	0	0	33	18	35.2941
RBFOX1	0	genome.wustl.edu	37	16	7759122	7759122	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	16	7759122	7759122	G	A	SNP	RBFOX1	ENST00000311745	human	ensembl	74_37	+1	known	missense	c.1123	p.V375I	1.000	pirsf_RNA-bd_Fox-1	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC	ENSG00000078328				218	1	0.456621	97	29	23.0159
FAM27L	0	genome.wustl.edu	37	17	21826201	21826201	+	RNA	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	17	21826201	21826201	C	T	SNP	FAM27L	ENST00000426869	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	FAM27L	HGNC	ENSG00000178130				145	0	0	58	15	20.5479
TNS4	0	genome.wustl.edu	37	17	38652436	38652436	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	17	38652436	38652436	G	A	SNP	TNS4	ENST00000254051	human	ensembl	74_37	-1	known	missense	c.242	p.P81L	0.000	NULL	pfam_PTB,pfam_SH2,smart_SH2,smart_PTB/PI_dom,pfscan_SH2	-	no_errors	TNS4	HGNC	ENSG00000131746				223	0	0	112	34	23.2877
ATP6V0A1	0	genome.wustl.edu	37	17	40639324	40639324	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	17	40639324	40639324	C	T	SNP	ATP6V0A1	ENST00000264649	human	ensembl	74_37	+1	known	missense	c.983	p.A328V	1.000	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	ATP6V0A1	HGNC	ENSG00000033627				220	0	0	118	16	11.9403
HOXB2	0	genome.wustl.edu	37	17	46621062	46621062	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	17	46621062	46621062	G	A	SNP	HOXB2	ENST00000330070	human	ensembl	74_37	-1	known	missense	c.439	p.R147C	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB2	HGNC	ENSG00000173917				47	0	0	34	5	12.8205
KCNH6	0	genome.wustl.edu	37	17	61621612	61621612	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	17	61621612	61621612	G	A	SNP	KCNH6	ENST00000583023	human	ensembl	74_37	+1	known	missense	c.2344	p.A782T	0.166	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_ELK,prints_2pore_dom_K_chnl,pfscan_cNMP-bd_dom	-	no_errors	KCNH6	HGNC	ENSG00000173826				72	0	0	46	12	20.6897
SEC14L1	0	genome.wustl.edu	37	17	75209548	75209548	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	17	75209548	75209548	C	T	SNP	SEC14L1	ENST00000392476	human	ensembl	74_37	+1	known	silent	c.2016	p.T672	0.068	superfamily_GOLD,pfscan_GOLD	pfam_PRELI/MSF1,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,pfscan_PRELI/MSF1	-	no_errors	SEC14L1	HGNC	ENSG00000129657				80	0	0	53	4	7.01754
RPTOR	0	genome.wustl.edu	37	17	78854264	78854264	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	17	78854264	78854264	C	T	SNP	RPTOR	ENST00000306801	human	ensembl	74_37	+1	known	missense	c.1559	p.S520L	0.962	superfamily_ARM-type_fold	pfam_HEAT,pfam_WD40_repeat,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Raptor	-	no_errors	RPTOR	HGNC	ENSG00000141564				103	0	0	36	4	10
SMARCA4	0	genome.wustl.edu	37	19	11123694	11123694	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	19	11123694	11123694	G	A	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.2344	p.G782S	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				98	0	0	61	10	14.0845
PCSK4	0	genome.wustl.edu	37	19	1481952	1481952	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	19	1481952	1481952	G	A	SNP	PCSK4	ENST00000300954	human	ensembl	74_37	-1	known	missense	c.2074	p.R692C	0.003	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK4	HGNC	ENSG00000115257				86	0	0	6	5	45.4545
MAST3	0	genome.wustl.edu	37	19	18218412	18218412	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	19	18218412	18218412	C	T	SNP	MAST3	ENST00000262811	human	ensembl	74_37	+1	known	missense	c.55	p.P19S	0.999	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST3	HGNC	ENSG00000099308				553	0	0	247	16	6.08365
MAST3	0	genome.wustl.edu	37	19	18255980	18255980	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	19	18255980	18255980	C	T	SNP	MAST3	ENST00000262811	human	ensembl	74_37	+1	known	missense	c.2893	p.R965W	1.000	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST3	HGNC	ENSG00000099308				197	1	0.505051	162	32	16.4948
HOMER3	0	genome.wustl.edu	37	19	19049214	19049214	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	19	19049214	19049214	C	T	SNP	HOMER3	ENST00000392351	human	ensembl	74_37	-1	known	missense	c.251	p.R84H	1.000	pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	HOMER3	HGNC	ENSG00000051128				268	0	0	108	51	32.0755
HDGFRP2	0	genome.wustl.edu	37	19	4499495	4499495	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	19	4499495	4499495	G	A	SNP	HDGFRP2	ENST00000301284	human	ensembl	74_37	+1	known	missense	c.1583	p.R528H	1.000	pfam_LEDGF	pfam_LEDGF,pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	HDGFRP2	Uniprot_gn	ENSG00000167674				33	0	0	11	9	45
IL4I1	0	genome.wustl.edu	37	19	50398344	50398344	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	19	50398344	50398344	G	A	SNP	IL4I1	ENST00000341114	human	ensembl	74_37	-1	known	missense	c.412	p.R138C	1.000	pfam_Amino_oxidase	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_CHP00275_HI0933-like,pfam_FAD_bind_dom,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_AlaDH/PNT_NAD(H)-bd,pfam_mOase_FAD-bd,prints_Flavin_amine_oxidase	-	no_errors	IL4I1	HGNC	ENSG00000104951				81	0	0	54	3	5.26316
TTN	0	genome.wustl.edu	37	2	179604668	179604668	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	2	179604668	179604668	T	G	SNP	TTN	ENST00000342175	human	ensembl	74_37	-1	known	missense	c.12779	p.N4260T	0.000	superfamily_RNaseH-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				231	0	0	122	34	21.7949
MPP4	0	genome.wustl.edu	37	2	202558645	202558645	+	Silent	SNP	T	T	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	2	202558645	202558645	T	G	SNP	MPP4	ENST00000359962	human	ensembl	74_37	-1	known	silent	c.33	p.P11	0.000	NULL	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_PDZ,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP4	HGNC	ENSG00000082126				844	1	0.118343	440	33	6.97674
ADAM23	0	genome.wustl.edu	37	2	207424813	207424813	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	2	207424813	207424813	G	T	SNP	ADAM23	ENST00000264377	human	ensembl	74_37	+1	known	missense	c.1140	p.K380N	0.993	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM23	HGNC	ENSG00000114948				90	0	0	60	21	25.9259
MSL3P1	0	genome.wustl.edu	37	2	234775774	234775774	+	RNA	SNP	T	T	C			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	2	234775774	234775774	T	C	SNP	MSL3P1	ENST00000438684	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	MSL3P1	HGNC	ENSG00000224287				87	0	0	44	8	15.3846
ANO7	0	genome.wustl.edu	37	2	242141701	242141701	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	2	242141701	242141701	C	T	SNP	ANO7	ENST00000274979	human	ensembl	74_37	+1	known	silent	c.867	p.A289	0.001	NULL	pfam_Anoctamin	-	no_errors	ANO7	HGNC	ENSG00000146205				105	0	0	51	12	19.0476
GALM	0	genome.wustl.edu	37	2	38908455	38908455	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	2	38908455	38908455	G	A	SNP	GALM	ENST00000272252	human	ensembl	74_37	+1	known	missense	c.379	p.V127I	0.923	pfam_Aldose_1/G6P_1-epimerase,superfamily_Gal_mutarotase_SF_dom	pfam_Aldose_1/G6P_1-epimerase,superfamily_Gal_mutarotase_SF_dom	-	no_errors	GALM	HGNC	ENSG00000143891				299	0	0	186	56	23.1405
KIAA1211L	0	genome.wustl.edu	37	2	99449454	99449454	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	2	99449454	99449454	C	T	SNP	KIAA1211L	ENST00000397899	human	ensembl	74_37	-1	known	silent	c.246	p.S82	0.178	NULL	NULL	-	no_errors	KIAA1211L	HGNC	ENSG00000196872				255	0	0	155	28	15.3005
SLC24A3	0	genome.wustl.edu	37	20	19662610	19662610	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	20	19662610	19662610	C	T	SNP	SLC24A3	ENST00000328041	human	ensembl	74_37	+1	known	silent	c.876	p.D292	0.628	tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A3	HGNC	ENSG00000185052				104	0	0	40	7	14.8936
TM9SF4	0	genome.wustl.edu	37	20	30742950	30742950	+	Silent	SNP	A	A	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	20	30742950	30742950	A	G	SNP	TM9SF4	ENST00000398022	human	ensembl	74_37	+1	known	silent	c.1290	p.V430	0.000	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF4	HGNC	ENSG00000101337				174	0	0	108	11	9.2437
SLC4A11	0	genome.wustl.edu	37	20	3214843	3214843	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	20	3214843	3214843	G	A	SNP	SLC4A11	ENST00000380059	human	ensembl	74_37	-1	known	missense	c.538	p.R180W	0.462	superfamily_PTrfase/Anion_transptr	pfam_HCO3_transpt_C,pfam_PTS_EIIA_type-2_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk	-	no_errors	SLC4A11	HGNC	ENSG00000088836				208	1	0.478469	117	27	18.75
ACSS2	0	genome.wustl.edu	37	20	33508432	33508432	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	20	33508432	33508432	T	A	SNP	ACSS2	ENST00000253382	human	ensembl	74_37	+1	known	missense	c.1102	p.C368S	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSS2	HGNC	ENSG00000131069				198	0	0	96	7	6.79612
ZBTB46	0	genome.wustl.edu	37	20	62421407	62421407	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	20	62421407	62421407	G	A	SNP	ZBTB46	ENST00000245663	human	ensembl	74_37	-1	known	missense	c.704	p.P235L	1.000	NULL	pfam_BTB_POZ,pfam_DUF3342,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB46	HGNC	ENSG00000130584				86	0	0	44	15	25.4237
SON	0	genome.wustl.edu	37	21	34918579	34918579	+	Silent	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	21	34918579	34918579	G	A	SNP	SON	ENST00000356577	human	ensembl	74_37	+1	known	silent	c.138	p.A46	1.000	NULL	pfam_G_patch_dom,superfamily_WD40_repeat_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_dsRNA-bd_dom	-	no_errors	SON	HGNC	ENSG00000159140				154	0	0	72	26	26.5306
SON	0	genome.wustl.edu	37	21	34924325	34924325	+	Silent	SNP	T	T	C			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	21	34924325	34924325	T	C	SNP	SON	ENST00000356577	human	ensembl	74_37	+1	known	silent	c.2788	p.L930	1.000	NULL	pfam_G_patch_dom,superfamily_WD40_repeat_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_dsRNA-bd_dom	-	no_errors	SON	HGNC	ENSG00000159140				111	0	0	54	3	5.26316
MX1	0	genome.wustl.edu	37	21	42824698	42824698	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	21	42824698	42824698	A	C	SNP	MX1	ENST00000398598	human	ensembl	74_37	+1	known	missense	c.1660	p.K554Q	0.000	pfam_Dynamin_central,superfamily_P-loop_NTPase	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_GED,prints_Dynamin_SF	-	no_errors	MX1	HGNC	ENSG00000157601				591	0	0	306	113	26.969
MYH9	0	genome.wustl.edu	37	22	36685273	36685273	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	22	36685273	36685273	C	G	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	missense	c.4415	p.R1472P	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345				65	0	0	32	6	15.7895
SEC13	0	genome.wustl.edu	37	3	10354288	10354288	+	Silent	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	3	10354288	10354288	G	A	SNP	SEC13	ENST00000350697	human	ensembl	74_37	-1	known	silent	c.291	p.H97	0.350	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC13	HGNC	ENSG00000157020				200	0	0	103	41	28.4722
GALNT15	0	genome.wustl.edu	37	3	16217180	16217180	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	3	16217180	16217180	C	T	SNP	GALNT15	ENST00000339732	human	ensembl	74_37	+1	known	silent	c.522	p.P174	0.443	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT15	HGNC	ENSG00000131386				78	0	0	36	8	18.1818
NLGN1	0	genome.wustl.edu	37	3	173525589	173525589	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	3	173525589	173525589	G	A	SNP	NLGN1	ENST00000401917	human	ensembl	74_37	+1	known	missense	c.733	p.V245I	1.000	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760				211	0	0	66	29	30.5263
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	3	178936082	178936082	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.1624	p.E542K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879				109	0	0	42	15	26.3158
CPNE9	0	genome.wustl.edu	37	3	9757165	9757165	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	3	9757165	9757165	C	A	SNP	CPNE9	ENST00000383832	human	ensembl	74_37	+1	known	missense	c.777	p.N259K	1.000	superfamily_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE9	HGNC	ENSG00000144550				95	0	0	87	9	9.375
BOD1L1	0	genome.wustl.edu	37	4	13602962	13602962	+	Silent	SNP	A	A	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	4	13602962	13602962	A	G	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	silent	c.5562	p.I1854	0.989	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219				187	1	0.531915	136	8	5.55556
FGA	0	genome.wustl.edu	37	4	155507659	155507659	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	4	155507659	155507659	G	A	SNP	FGA	ENST00000302053	human	ensembl	74_37	-1	known	nonsense	c.922	p.R308*	0.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,pfam_Fibrinogen_a/b/g_coil_dom,pfam_Fibrinogen_aC,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGA	HGNC	ENSG00000171560				279	0	0	181	50	21.645
EVC2	0	genome.wustl.edu	37	4	5564606	5564606	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	4	5564606	5564606	T	A	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	missense	c.3896	p.K1299I	0.946	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040				358	1	0.278552	154	41	21.0256
ADAMTS3	0	genome.wustl.edu	37	4	73175207	73175207	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	4	73175207	73175207	T	A	SNP	ADAMTS3	ENST00000286657	human	ensembl	74_37	-1	known	missense	c.2086	p.N696Y	1.000	prints_Peptidase_M12B_ADAM-TS	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS3	HGNC	ENSG00000156140				162	0	0	90	35	28
MCC	0	genome.wustl.edu	37	5	112406814	112406814	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	5	112406814	112406814	C	T	SNP	MCC	ENST00000302475	human	ensembl	74_37	-1	known	silent	c.1332	p.A444	0.950	pfam_USH1C-bd_PDZ_domain	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm	-	no_errors	MCC	HGNC	ENSG00000171444				276	0	0	153	33	17.7419
RAB24	0	genome.wustl.edu	37	5	176730061	176730061	+	Silent	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	5	176730061	176730061	G	A	SNP	RAB24	ENST00000303251	human	ensembl	74_37	-1	known	silent	c.135	p.F45	0.999	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB24	HGNC	ENSG00000169228				83	0	0	55	6	9.83607
FLT4	0	genome.wustl.edu	37	5	180038423	180038423	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	5	180038423	180038423	G	C	SNP	FLT4	ENST00000261937	human	ensembl	74_37	-1	known	missense	c.3594	p.S1198R	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR3_rcpt	-	no_errors	FLT4	HGNC	ENSG00000037280				214	0	0	100	39	28.0576
MAST4	0	genome.wustl.edu	37	5	66430465	66430465	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	5	66430465	66430465	G	A	SNP	MAST4	ENST00000404260	human	ensembl	74_37	+1	known	missense	c.2350	p.V784M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST4	HGNC	ENSG00000069020				415	0	0	172	41	19.2488
VCAN	0	genome.wustl.edu	37	5	82816386	82816386	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	5	82816386	82816386	C	A	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.2261	p.T754K	0.000	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				128	1	0.775194	72	16	18.1818
GPR98	0	genome.wustl.edu	37	5	89923174	89923174	+	Silent	SNP	T	T	C			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	5	89923174	89923174	T	C	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	silent	c.819	p.P273	0.505	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				311	0	0	162	15	8.47458
RIOK2	0	genome.wustl.edu	37	5	96503524	96503524	+	Silent	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	5	96503524	96503524	G	A	SNP	RIOK2	ENST00000283109	human	ensembl	74_37	-1	known	silent	c.1044	p.Y348	0.000	NULL	pfam_RIO-like_kinase,pfam_RIO2_kinase_winged_hlx_N,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_RIO_kinase	-	no_errors	RIOK2	HGNC	ENSG00000058729				567	1	0.176056	384	66	14.6667
HIVEP1	0	genome.wustl.edu	37	6	12123037	12123037	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	6	12123037	12123037	C	T	SNP	HIVEP1	ENST00000379388	human	ensembl	74_37	+1	known	silent	c.3009	p.P1003	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP1	HGNC	ENSG00000095951				420	1	0.23753	185	38	17.0404
CENPW	0	genome.wustl.edu	37	6	126661513	126661513	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	6	126661513	126661513	C	T	SNP	CENPW	ENST00000368325	human	ensembl	74_37	+1	known	nonsense	c.94	p.Q32*	0.975	NULL	NULL	-	no_errors	CENPW	HGNC	ENSG00000203760				182	0	0	65	16	19.7531
PRRC2A	0	genome.wustl.edu	37	6	31600597	31600597	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	6	31600597	31600597	C	T	SNP	PRRC2A	ENST00000376007	human	ensembl	74_37	+1	known	missense	c.4147	p.R1383W	0.999	NULL	pfam_BAT2_N	-	no_errors	PRRC2A	HGNC	ENSG00000204469				306	0	0	181	38	17.3516
RWDD2A	0	genome.wustl.edu	37	6	83905791	83905791	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	6	83905791	83905791	G	A	SNP	RWDD2A	ENST00000369724	human	ensembl	74_37	+1	known	missense	c.679	p.V227M	0.000	pfam_DUF1115,pirsf_UCP038021_RWD	pfam_DUF1115,pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pirsf_UCP038021_RWD,pfscan_RWD-domain	-	no_errors	RWDD2A	HGNC	ENSG00000013392				245	0	0	113	31	21.5278
TBX18	0	genome.wustl.edu	37	6	85446536	85446536	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	6	85446536	85446536	G	A	SNP	TBX18	ENST00000369663	human	ensembl	74_37	-1	known	missense	c.1691	p.T564M	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	TBX18	HGNC	ENSG00000112837				227	0	0	88	20	18.5185
TRPV6	0	genome.wustl.edu	37	7	142573294	142573294	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	7	142573294	142573294	C	T	SNP	TRPV6	ENST00000359396	human	ensembl	74_37	-1	known	missense	c.1049	p.R350H	1.000	prints_TRPV5/TRPV6,tigrfam_TRP_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6,prints_TRPV6_channel,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV6	HGNC	ENSG00000165125				308	0	0	171	16	8.55615
FASTK	0	genome.wustl.edu	37	7	150775728	150775728	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	7	150775728	150775728	C	T	SNP	FASTK	ENST00000297532	human	ensembl	74_37	-1	known	missense	c.746	p.R249Q	1.000	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTK	HGNC	ENSG00000164896				65	0	0	47	5	9.61538
ACTB	0	genome.wustl.edu	37	7	5568970	5568970	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	7	5568970	5568970	C	G	SNP	ACTB	ENST00000331789	human	ensembl	74_37	-1	known	missense	c.185	p.R62T	1.000	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTB	HGNC	ENSG00000075624				202	0	0	131	30	18.6335
HGF	0	genome.wustl.edu	37	7	81381520	81381520	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	7	81381520	81381520	G	A	SNP	HGF	ENST00000222390	human	ensembl	74_37	-1	known	nonsense	c.541	p.R181*	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGF	HGNC	ENSG00000019991				162	0	0	97	14	12.6126
KIAA1324L	0	genome.wustl.edu	37	7	86526893	86526893	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	7	86526893	86526893	C	T	SNP	KIAA1324L	ENST00000450689	human	ensembl	74_37	-1	known	missense	c.2614	p.A872T	1.000	superfamily_Man6P_isomerase_rcpt-bd_dom	superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Growth_fac_rcpt_N_dom	-	no_errors	KIAA1324L	HGNC	ENSG00000164659				96	0	0	105	13	11.0169
SOX7	0	genome.wustl.edu	37	8	10583557	10583557	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	8	10583557	10583557	C	T	SNP	SOX7	ENST00000553390	human	ensembl	74_37	-1	known	silent	c.1014	p.P338	0.003	pfam_Sox_C_TAD	pfam_Sox_C_TAD,pfam_G_patch_dom,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_HMG_box_dom	-	no_errors	SOX7	HGNC	ENSG00000171056				232	0	0	40	9	18.3673
DLC1	0	genome.wustl.edu	37	8	13259102	13259102	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	8	13259102	13259102	C	T	SNP	DLC1	ENST00000276297	human	ensembl	74_37	-1	known	silent	c.1050	p.A350	0.000	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741				207	0	0	104	18	14.7541
TACC1	0	genome.wustl.edu	37	8	38693782	38693782	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	8	38693782	38693782	G	A	SNP	TACC1	ENST00000379931	human	ensembl	74_37	+1	known	missense	c.1852	p.V618M	0.998	pfam_TACC	pfam_TACC	-	no_errors	TACC1	HGNC	ENSG00000147526				131	0	0	79	12	13.1868
CHRNB3	0	genome.wustl.edu	37	8	42586889	42586889	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	8	42586889	42586889	G	A	SNP	CHRNB3	ENST00000289957	human	ensembl	74_37	+1	known	missense	c.439	p.A147T	0.994	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB3	HGNC	ENSG00000147432				65	0	0	36	14	28
MCM4	0	genome.wustl.edu	37	8	48874864	48874864	+	Splice_Site	SNP	G	G	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	8	48874864	48874864	G	T	SNP	MCM4	ENST00000262105	human	ensembl	74_37	+1	known	splice_site	c.400-1	e4-1	1.000	-	-	-	no_errors	MCM4	HGNC	ENSG00000104738				118	0	0	64	6	8.57143
MCPH1	0	genome.wustl.edu	37	8	6500543	6500543	+	Silent	SNP	C	C	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	8	6500543	6500543	C	T	SNP	MCPH1	ENST00000344683	human	ensembl	74_37	+1	known	silent	c.2481	p.A827	0.365	superfamily_BRCT_dom,pfscan_BRCT_dom	pfam_Microcephalin,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom,prints_BRCA1	-	no_errors	MCPH1	HGNC	ENSG00000147316				67	0	0	44	3	6.38298
NUP214	0	genome.wustl.edu	37	9	134049567	134049567	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	9	134049567	134049567	G	A	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	missense	c.3022	p.E1008K	0.975	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883				296	0	0	147	24	14.0351
XPNPEP2	0	genome.wustl.edu	37	X	128878049	128878049	+	Splice_Site	SNP	T	T	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	X	128878049	128878049	T	G	SNP	XPNPEP2	ENST00000371106	human	ensembl	74_37	+1	known	splice_site	c.234+2	e3+2	0.999	-	-	-	no_errors	XPNPEP2	HGNC	ENSG00000122121				225	0	0	147	36	19.6721
G6PD	0	genome.wustl.edu	37	X	153763395	153763395	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	X	153763395	153763395	C	A	SNP	G6PD	ENST00000369620	human	ensembl	74_37	-1	known	missense	c.473	p.C158F	1.000	pfam_G6P_DH_NAD-bd,pirsf_G6P_DH	pfam_G6P_DH_C,pfam_G6P_DH_NAD-bd,pirsf_G6P_DH,prints_G6P_DH	-	no_errors	G6PD	HGNC	ENSG00000160211				310	0	0	119	27	18.4932
TMLHE	0	genome.wustl.edu	37	X	154736649	154736649	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	X	154736649	154736649	A	G	SNP	TMLHE	ENST00000334398	human	ensembl	74_37	-1	known	missense	c.905	p.I302T	1.000	pfam_Taurine_dOase,tigrfam_Trimethyllysine_dOase	pfam_Taurine_dOase,pfam_DUF971,tigrfam_Trimethyllysine_dOase	-	no_errors	TMLHE	HGNC	ENSG00000185973				400	0	0	179	54	23.176
DMD	0	genome.wustl.edu	37	X	31854892	31854892	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	X	31854892	31854892	C	A	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.7143	p.E2381D	0.999	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				279	0	0	153	28	15.4696
CYSLTR1	0	genome.wustl.edu	37	X	77529189	77529189	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	X	77529189	77529189	C	G	SNP	CYSLTR1	ENST00000373304	human	ensembl	74_37	-1	known	missense	c.55	p.D19H	1.000	prints_Cyst_leuk_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_Cyst_leuk_rcpt,prints_CLT1_recept,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	CYSLTR1	HGNC	ENSG00000173198				305	0	0	109	25	18.6567
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251				93	0	0	71	7	8.97436
BAG3	0	genome.wustl.edu	37	10	121431795	121431796	+	In_Frame_Ins	INS	-	-	CTCATC			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	10	121431795	121431796	-	CTCATC	INS	BAG3	ENST00000369085	human	ensembl	74_37	+1	known	in_frame_ins	c.536_537	p.183in_frame_insSS	0.997:0.998	NULL	pfam_BAG_domain,pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,smart_BAG_domain,pfscan_BAG_domain,pfscan_WW_dom	-	no_errors	BAG3	HGNC	ENSG00000151929				126	0	0	80	11	12.0879
ARID2	0	genome.wustl.edu	37	12	46246525	46246528	+	Frame_Shift_Del	DEL	CAAT	CAAT	-			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	CAAT	CAAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	12	46246525	46246528	CAAT	-	DEL	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	frame_shift_del	c.4619_4622	p.I1541fs	1.000:1.000:1.000:1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079				127	0	0	60	24	28.5714
CHD4	0	genome.wustl.edu	37	12	6680117	6680118	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	12	6680117	6680118	GG	-	DEL	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	frame_shift_del	c.5723_5722	p.P1908fs	1.000:1.000	pfam_CHD_C2	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642				795	0	0	381	86	18.4154
THSD1	0	genome.wustl.edu	37	13	52971746	52971747	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	13	52971746	52971747	AT	-	DEL	THSD1	ENST00000258613	human	ensembl	74_37	-1	known	frame_shift_del	c.642_641	p.Y214fs	0.981:0.984	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD1	HGNC	ENSG00000136114				127	0	0	66	18	21.4286
RHPN2	0	genome.wustl.edu	37	19	33486993	33486994	+	Frame_Shift_Del	DEL	CG	CG	-			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	CG	CG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	19	33486993	33486994	CG	-	DEL	RHPN2	ENST00000254260	human	ensembl	74_37	-1	known	frame_shift_del	c.1359_1358	p.T453fs	0.993:1.000	pfam_BRO1_dom,pfscan_BRO1_dom	pfam_BRO1_dom,pfam_HR1_rho-bd,superfamily_HR1_rho-bd,superfamily_PDZ,smart_HR1_rho-bd,smart_PDZ,pfscan_BRO1_dom	-	no_errors	RHPN2	HGNC	ENSG00000131941				153	0	0	100	18	15.2542
EIF2AK3	0	genome.wustl.edu	37	2	88890489	88890489	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	2	88890489	88890489	A	-	DEL	EIF2AK3	ENST00000303236	human	ensembl	74_37	-1	known	frame_shift_del	c.849	p.F283fs	0.984	superfamily_Quinonprotein_ADH-like_supfam	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK3	HGNC	ENSG00000172071				256	0	0	163	30	15.544
UPK1B	0	genome.wustl.edu	37	3	118917988	118917991	+	Splice_Site	DEL	GTGA	GTGA	-			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	GTGA	GTGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	3	118917988	118917991	GTGA	-	DEL	UPK1B	ENST00000264234	human	ensembl	74_37	+1	known	splice_site_del	c.732+1_732+1	e6+1	0.999:1.000:1.000:1.000	-	-	-	no_errors	UPK1B	HGNC	ENSG00000114638				91	0	0	65	5	7.14286
ATXN7L1	0	genome.wustl.edu	37	7	105254802	105254804	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	7	105254802	105254804	GAG	-	DEL	ATXN7L1	ENST00000419735	human	ensembl	74_37	-1	known	in_frame_del	c.1979_1977	p.S661in_frame_del	0.098:0.098:0.097	NULL	pfam_SCA7_dom	-	no_errors	ATXN7L1	HGNC	ENSG00000146776				13	0	0	4	2	33.3333
ZDHHC4	0	genome.wustl.edu	37	7	6621848	6621849	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	7	6621848	6621849	-	T	INS	ZDHHC4	ENST00000335965	human	ensembl	74_37	+1	known	frame_shift_ins	c.336_337	p.T115fs	0.935:0.001	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC4	HGNC	ENSG00000136247				407	0	0	362	20	5.2356
AFF2	0	genome.wustl.edu	37	X	148062319	148062322	+	Frame_Shift_Del	DEL	AAGT	AAGT	-			TCGA-CG-4474-01A-02D-1158-08	TCGA-CG-4474-10A-01D-1158-08	AAGT	AAGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	76ca314e-8af8-4dd2-a136-9df8e9bd052d	4db705ef-e1e4-4403-8ba3-e8bed2fe3e22	X	148062319	148062322	AAGT	-	DEL	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	frame_shift_del	c.3622_3623	p.K1208fs	1.000:1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				218	0	0	90	15	14.2857
