Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
LOC100996735	0	genome.wustl.edu	37	1	148933298	148933298	+	RNA	SNP	T	T	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	148933298	148933298	T	G	SNP	LOC100996735	ENST00000294715	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.249	-	-	-	no_errors	RP11-14N7.2	Clone_based_vega_gene	ENSG00000232527				32	0	0	47	4	7.84314
FLG	0	genome.wustl.edu	37	1	152283872	152283872	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	152283872	152283872	T	G	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.3490	p.T1164P	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				743	2	0.268456	957	85	8.15739
ASH1L	0	genome.wustl.edu	37	1	155449351	155449351	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	155449351	155449351	G	C	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.3310	p.P1104A	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				133	0	0	96	144	60
ASH1L	0	genome.wustl.edu	37	1	155450163	155450163	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	155450163	155450163	G	C	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.2498	p.S833C	0.997	smart_AT_hook_DNA-bd_motif	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				290	0	0	302	262	46.4539
CROCCP2	0	genome.wustl.edu	37	1	16946471	16946471	+	RNA	SNP	G	G	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	16946471	16946471	G	C	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908				18	0	0	21	6	22.2222
SIPA1L2	0	genome.wustl.edu	37	1	232564213	232564213	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	232564213	232564213	C	T	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.4354	p.D1452N	1.000	pfam_DUF3401	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				138	0	0	116	12	9.375
HEATR1	0	genome.wustl.edu	37	1	236718881	236718881	+	Silent	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	236718881	236718881	G	A	SNP	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	silent	c.5724	p.S1908	0.129	pfam_BP28_C_dom,superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285				136	0	0	89	19	17.5926
TFB2M	0	genome.wustl.edu	37	1	246727680	246727680	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	246727680	246727680	C	T	SNP	TFB2M	ENST00000366514	human	ensembl	74_37	-1	known	missense	c.370	p.E124K	1.000	pfam_rRNA_Ade_methylase_transferase,smart_rRNA_Ade_methylase_Trfase_N,pirsf_Mt_di-Me-Ado_Trfase_2_prcur	pfam_rRNA_Ade_methylase_transferase,smart_rRNA_Ade_methylase_Trfase_N,pirsf_Mt_di-Me-Ado_Trfase_2_prcur	-	no_errors	TFB2M	HGNC	ENSG00000162851				166	0	0	125	26	17.2185
OR2M3	0	genome.wustl.edu	37	1	248366472	248366472	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	248366472	248366472	T	C	SNP	OR2M3	ENST00000456743	human	ensembl	74_37	+1	known	missense	c.103	p.F35L	0.031	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M3	HGNC	ENSG00000228198				551	0	0	311	163	34.3882
OR2M3	0	genome.wustl.edu	37	1	248366498	248366498	+	Silent	SNP	T	T	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	248366498	248366498	T	C	SNP	OR2M3	ENST00000456743	human	ensembl	74_37	+1	known	silent	c.129	p.S43	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M3	HGNC	ENSG00000228198				584	0	0	318	149	31.9058
OR2M3	0	genome.wustl.edu	37	1	248366499	248366499	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	248366499	248366499	G	A	SNP	OR2M3	ENST00000456743	human	ensembl	74_37	+1	known	missense	c.130	p.V44I	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M3	HGNC	ENSG00000228198				583	0	0	319	154	32.5581
OR2M7	0	genome.wustl.edu	37	1	248487715	248487715	+	Silent	SNP	A	A	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	248487715	248487715	A	G	SNP	OR2M7	ENST00000317965	human	ensembl	74_37	-1	known	silent	c.156	p.D52	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M7	HGNC	ENSG00000177186				569	0	0	576	55	8.71632
SRSF11	0	genome.wustl.edu	37	1	70716454	70716454	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	70716454	70716454	A	G	SNP	SRSF11	ENST00000370950	human	ensembl	74_37	+1	known	missense	c.1421	p.D474G	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF11	HGNC	ENSG00000116754				154	0	0	106	47	30.719
KAT6B	0	genome.wustl.edu	37	10	76789623	76789623	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	10	76789623	76789623	G	A	SNP	KAT6B	ENST00000287239	human	ensembl	74_37	+1	known	missense	c.5041	p.E1681K	1.000	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,pfam_Histone_H1/H5_H15,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6B	HGNC	ENSG00000156650				155	0	0	83	46	35.6589
C11orf87	0	genome.wustl.edu	37	11	109294681	109294681	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	11	109294681	109294681	G	A	SNP	C11orf87	ENST00000327419	human	ensembl	74_37	+1	known	missense	c.322	p.G108S	1.000	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	C11orf87	HGNC	ENSG00000185742				213	0	0	174	31	15.122
UTP20	0	genome.wustl.edu	37	12	101739354	101739354	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	12	101739354	101739354	C	T	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	missense	c.4628	p.T1543I	0.757	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800				60	0	0	36	17	32.0755
PRPH	0	genome.wustl.edu	37	12	49690240	49690240	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	12	49690240	49690240	G	T	SNP	PRPH	ENST00000257860	human	ensembl	74_37	+1	known	missense	c.632	p.R211L	1.000	pfam_IF,prints_Keratin_I	pfam_IF,pfam_Intermed_filament_DNA-bd,prints_Keratin_I	-	no_errors	PRPH	HGNC	ENSG00000135406				49	0	0	40	10	20
ESPL1	0	genome.wustl.edu	37	12	53673625	53673625	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	12	53673625	53673625	C	T	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	missense	c.2474	p.T825I	0.060	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476				244	0	0	182	41	18.3857
ZFC3H1	0	genome.wustl.edu	37	12	72038074	72038074	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	12	72038074	72038074	T	A	SNP	ZFC3H1	ENST00000378743	human	ensembl	74_37	-1	known	missense	c.1304	p.Q435L	1.000	NULL	pfam_Putative_zinc-finger_domain,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	ZFC3H1	HGNC	ENSG00000133858				41	0	0	38	10	20.8333
POMP	0	genome.wustl.edu	37	13	29238647	29238647	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	13	29238647	29238647	T	G	SNP	POMP	ENST00000380842	human	ensembl	74_37	+1	known	missense	c.103	p.F35V	0.999	pfam_UMP1	pfam_UMP1	-	no_errors	POMP	HGNC	ENSG00000132963				39	0	0	20	17	45.9459
ESD	0	genome.wustl.edu	37	13	47351721	47351721	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	13	47351721	47351721	C	A	SNP	ESD	ENST00000378720	human	ensembl	74_37	-1	known	missense	c.638	p.G213V	0.425	pfam_Esterase_put,pfam_Peptidase_S9,tigrfam_S-formylglutathione_hydrol	pfam_Esterase_put,pfam_Peptidase_S9,pfam_AXE1,tigrfam_S-formylglutathione_hydrol	-	no_errors	ESD	HGNC	ENSG00000139684				128	0	0	87	63	42
ASPG	0	genome.wustl.edu	37	14	104570728	104570728	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	14	104570728	104570728	C	T	SNP	ASPG	ENST00000455920	human	ensembl	74_37	+1	known	nonsense	c.841	p.Q281*	0.017	pfam_Asparaginase/glutaminase,superfamily_Asparaginase/glutaminase,smart_Asparaginase/glutaminase,tigrfam_AsnASEI	pfam_Asparaginase/glutaminase,pfam_Ankyrin_rpt,superfamily_Asparaginase/glutaminase,superfamily_Ankyrin_rpt-contain_dom,smart_Asparaginase/glutaminase,smart_Ankyrin_rpt,prints_Asparaginase/glutaminase,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_AsnASEI	-	no_errors	ASPG	HGNC	ENSG00000166183				54	0	0	48	7	12.7273
RTF1	0	genome.wustl.edu	37	15	41766890	41766890	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	15	41766890	41766890	C	G	SNP	RTF1	ENST00000389629	human	ensembl	74_37	+1	known	missense	c.1276	p.L426V	0.625	pfam_Plus-3,smart_Plus3-dom_subgr	pfam_Plus-3,smart_Plus3-dom_subgr	-	no_errors	RTF1	HGNC	ENSG00000137815				235	0	0	145	88	37.7682
ACSM2A	0	genome.wustl.edu	37	16	20497944	20497944	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	16	20497944	20497944	C	T	SNP	ACSM2A	ENST00000219054	human	ensembl	74_37	+1	known	nonsense	c.1678	p.R560*	0.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2A	HGNC	ENSG00000183747				363	0	0	285	170	37.3626
MYH3	0	genome.wustl.edu	37	17	10546195	10546195	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	17	10546195	10546195	G	A	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	missense	c.1529	p.T510M	0.100	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063				301	0	0	212	42	16.5354
UBBP4	0	genome.wustl.edu	37	17	21731501	21731501	+	Silent	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	17	21731501	21731501	G	A	SNP	UBBP4	ENST00000578713	human	ensembl	74_37	+1	putative	silent	c.576	p.Q192	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBBP4	HGNC	ENSG00000263563				81	0	0	50	22	30.5556
NGFR	0	genome.wustl.edu	37	17	47587929	47587929	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	17	47587929	47587929	G	A	SNP	NGFR	ENST00000172229	human	ensembl	74_37	+1	known	missense	c.724	p.V242M	0.515	NULL	pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_16	-	no_errors	NGFR	HGNC	ENSG00000064300				127	0	0	99	22	18.1818
CPAMD8	0	genome.wustl.edu	37	19	17025586	17025586	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	19	17025586	17025586	G	A	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.3808	p.R1270C	0.994	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				79	0	0	43	27	38.5714
CAPN12	0	genome.wustl.edu	37	19	39228254	39228254	+	Silent	SNP	G	G	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	19	39228254	39228254	G	C	SNP	CAPN12	ENST00000328867	human	ensembl	74_37	-1	known	silent	c.990	p.L330	0.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN12	HGNC	ENSG00000182472				42	0	0	25	23	47.9167
ZNF283	0	genome.wustl.edu	37	19	44351768	44351768	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	19	44351768	44351768	A	G	SNP	ZNF283	ENST00000324461	human	ensembl	74_37	+1	known	missense	c.1015	p.I339V	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF283	HGNC	ENSG00000167637				101	0	0	114	24	17.3913
MADCAM1	0	genome.wustl.edu	37	19	501786	501786	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	19	501786	501786	C	A	SNP	MADCAM1	ENST00000215637	human	ensembl	74_37	+1	known	missense	c.785	p.P262Q	0.000	NULL	pfam_Adhes-Ig-like,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	MADCAM1	HGNC	ENSG00000099866				18	0	0	9	5	35.7143
ENSG00000267751	0	genome.wustl.edu	37	19	571480	571480	+	RNA	SNP	T	T	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	19	571480	571480	T	C	SNP	ENSG00000267751	ENST00000588290	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.082	-	-	-	no_errors	AC009005.2	Clone_based_vega_gene	ENSG00000267751				55	0	0	25	17	40.4762
ZNF530	0	genome.wustl.edu	37	19	58117777	58117777	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	19	58117777	58117777	A	C	SNP	ZNF530	ENST00000332854	human	ensembl	74_37	+1	known	missense	c.884	p.Y295S	0.774	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF530	HGNC	ENSG00000183647				210	1	0.473934	221	30	11.9522
TTN	0	genome.wustl.edu	37	2	179543553	179543553	+	Silent	SNP	A	A	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	2	179543553	179543553	A	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.30015	p.P10005	0.999	pfam_PPAK_motif,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				79	0	0	61	50	45.045
COL3A1	0	genome.wustl.edu	37	2	189859318	189859318	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	2	189859318	189859318	C	T	SNP	COL3A1	ENST00000304636	human	ensembl	74_37	+1	known	missense	c.1345	p.R449C	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL3A1	HGNC	ENSG00000168542				135	0	0	46	45	49.4505
WDR35	0	genome.wustl.edu	37	2	20135333	20135333	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	2	20135333	20135333	G	A	SNP	WDR35	ENST00000345530	human	ensembl	74_37	-1	known	missense	c.2479	p.R827W	0.997	pirsf_WD_repeat_p35	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pirsf_WD_repeat_p35,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR35	HGNC	ENSG00000118965				158	0	0	71	39	35.4545
NRXN1	0	genome.wustl.edu	37	2	50724576	50724576	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	2	50724576	50724576	G	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.2750	p.T917N	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				105	0	0	107	25	18.9394
ZNF133	0	genome.wustl.edu	37	20	18297430	18297430	+	Silent	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	20	18297430	18297430	G	A	SNP	ZNF133	ENST00000396026	human	ensembl	74_37	+1	known	silent	c.1944	p.G648	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF133	HGNC	ENSG00000125846				142	0	0	115	32	21.7687
TTI1	0	genome.wustl.edu	37	20	36624824	36624824	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	20	36624824	36624824	A	C	SNP	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	missense	c.3039	p.I1013M	1.000	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407				88	0	0	73	18	19.7802
TSHZ2	0	genome.wustl.edu	37	20	51872838	51872838	+	Silent	SNP	T	T	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	20	51872838	51872838	T	G	SNP	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	silent	c.2841	p.S947	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463				136	0	0	154	18	10.4651
BACE2	0	genome.wustl.edu	37	21	42647386	42647386	+	Silent	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	21	42647386	42647386	C	T	SNP	BACE2	ENST00000330333	human	ensembl	74_37	+1	known	silent	c.1392	p.S464	0.000	prints_Pept_A1_BACE2	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Pept_A1_BACE,prints_Pept_A1_BACE2,prints_Aspartic_peptidase,prints_Pept_A1_BACE1	-	no_errors	BACE2	HGNC	ENSG00000182240				164	0	0	122	17	12.2302
POM121L9P	0	genome.wustl.edu	37	22	24659734	24659734	+	RNA	SNP	T	T	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	22	24659734	24659734	T	C	SNP	POM121L9P	ENST00000414583	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	POM121L9P	HGNC	ENSG00000128262				32	0	0	29	3	9.375
ATP2C1	0	genome.wustl.edu	37	3	130698260	130698260	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	3	130698260	130698260	A	G	SNP	ATP2C1	ENST00000393221	human	ensembl	74_37	+1	known	missense	c.1840	p.I614V	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_PMR1	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2C1	HGNC	ENSG00000017260				167	0	0	131	27	17.0886
FGFR3	0	genome.wustl.edu	37	4	1808924	1808924	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	4	1808924	1808924	G	A	SNP	FGFR3	ENST00000340107	human	ensembl	74_37	+1	known	missense	c.2362	p.D788N	1.000	pirsf_FGF_rcpt_fam	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR3	HGNC	ENSG00000068078				30	0	0	22	2	8.33333
GRID2	0	genome.wustl.edu	37	4	94436498	94436498	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	4	94436498	94436498	G	A	SNP	GRID2	ENST00000282020	human	ensembl	74_37	+1	known	missense	c.2129	p.R710Q	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208				121	0	0	89	27	23.2759
PCDHGA10	0	genome.wustl.edu	37	5	140792994	140792994	+	Silent	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	5	140792994	140792994	C	T	SNP	PCDHGA10	ENST00000398610	human	ensembl	74_37	+1	known	silent	c.252	p.R84	0.017	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA10	HGNC	ENSG00000253846				305	0	0	207	34	14.1079
SPRY4	0	genome.wustl.edu	37	5	141694444	141694444	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	5	141694444	141694444	G	A	SNP	SPRY4	ENST00000344120	human	ensembl	74_37	-1	known	missense	c.299	p.T100M	0.066	NULL	pfam_Sprouty	-	no_errors	SPRY4	HGNC	ENSG00000187678				90	0	0	44	39	46.988
FAT2	0	genome.wustl.edu	37	5	150934214	150934214	+	Silent	SNP	C	C	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	5	150934214	150934214	C	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	silent	c.3654	p.G1218	0.128	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570				180	0	0	120	63	34.4262
HMGCS1	0	genome.wustl.edu	37	5	43294196	43294196	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	5	43294196	43294196	G	C	SNP	HMGCS1	ENST00000325110	human	ensembl	74_37	-1	known	missense	c.1145	p.T382S	1.000	pfam_HMG_CoA_synt_C,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk	pfam_HMG_CoA_synt_C,pfam_HMG_CoA_synth_N,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk	-	no_errors	HMGCS1	HGNC	ENSG00000112972				130	1	0.763359	91	46	33.5766
PTPRK	0	genome.wustl.edu	37	6	128298175	128298175	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	6	128298175	128298175	T	A	SNP	PTPRK	ENST00000368227	human	ensembl	74_37	-1	known	missense	c.3787	p.I1263F	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRK	HGNC	ENSG00000152894				286	0	0	137	82	37.4429
MAP3K4	0	genome.wustl.edu	37	6	161470483	161470483	+	Silent	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	6	161470483	161470483	C	T	SNP	MAP3K4	ENST00000392142	human	ensembl	74_37	+1	known	silent	c.1179	p.L393	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511				182	0	0	142	27	15.9763
NOTCH4	0	genome.wustl.edu	37	6	32172008	32172008	+	Silent	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	6	32172008	32172008	G	A	SNP	NOTCH4	ENST00000375023	human	ensembl	74_37	-1	known	silent	c.3024	p.D1008	0.919	pirsf_Notch,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_Ankyrin_rpt,pfam_EGF-like_Ca-bd_dom,pfam_Notch_dom,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_4,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH4	HGNC	ENSG00000204301				71	0	0	69	5	6.75676
GJA10	0	genome.wustl.edu	37	6	90605698	90605698	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	6	90605698	90605698	C	G	SNP	GJA10	ENST00000369352	human	ensembl	74_37	+1	known	missense	c.1511	p.P504R	0.005	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJA10	HGNC	ENSG00000135355				185	0	0	103	43	29.4521
INTS4L1	0	genome.wustl.edu	37	7	64639816	64639816	+	RNA	SNP	A	A	G			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	7	64639816	64639816	A	G	SNP	INTS4L1	ENST00000587624	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	INTS4L1	HGNC	ENSG00000164669				89	0	0	76	35	31.5315
VPS13B	0	genome.wustl.edu	37	8	100673652	100673652	+	Silent	SNP	A	A	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	8	100673652	100673652	A	T	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	silent	c.6054	p.I2018	0.997	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				178	0	0	202	20	9.00901
ZFPM2	0	genome.wustl.edu	37	8	106815406	106815406	+	Silent	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	8	106815406	106815406	G	A	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	silent	c.3096	p.L1032	0.998	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946				56	0	0	44	31	41.3333
CSMD3	0	genome.wustl.edu	37	8	114186043	114186043	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	8	114186043	114186043	G	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.617	p.T206I	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				209	0	0	318	21	6.19469
TEX15	0	genome.wustl.edu	37	8	30695201	30695201	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	8	30695201	30695201	A	T	SNP	TEX15	ENST00000256246	human	ensembl	74_37	-1	known	missense	c.7450	p.S2484T	0.000	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863				305	0	0	165	53	24.3119
OSGIN2	0	genome.wustl.edu	37	8	90937575	90937575	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	8	90937575	90937575	G	A	SNP	OSGIN2	ENST00000451899	human	ensembl	74_37	+1	known	missense	c.1465	p.E489K	1.000	NULL	NULL	-	no_errors	OSGIN2	HGNC	ENSG00000164823				348	0	0	418	91	17.8782
GSN	0	genome.wustl.edu	37	9	124094717	124094717	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	9	124094717	124094717	C	T	SNP	GSN	ENST00000373818	human	ensembl	74_37	+1	known	missense	c.2185	p.R729W	1.000	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	GSN	HGNC	ENSG00000148180				188	0	0	137	39	22.1591
URM1	0	genome.wustl.edu	37	9	131151545	131151545	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	9	131151545	131151545	C	T	SNP	URM1	ENST00000452446	human	ensembl	74_37	+1	known	missense	c.194	p.P65L	1.000	pfam_Urm1,superfamily_Mopterin_synth/thiamin_S_b	pfam_Urm1,superfamily_Mopterin_synth/thiamin_S_b	-	no_errors	URM1	HGNC	ENSG00000167118				181	0	0	112	16	12.5
LAMC3	0	genome.wustl.edu	37	9	133948214	133948214	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	9	133948214	133948214	G	A	SNP	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	missense	c.3409	p.A1137T	0.000	NULL	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555				33	0	0	25	9	26.4706
PRRC2B	0	genome.wustl.edu	37	9	134319661	134319661	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	9	134319661	134319661	G	C	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.559	p.E187Q	1.000	pfam_BAT2_N	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723				63	0	0	45	6	11.7647
PRRC2B	0	genome.wustl.edu	37	9	134319676	134319676	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	9	134319676	134319676	G	A	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.574	p.D192N	1.000	pfam_BAT2_N	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723				41	0	0	33	6	15.3846
ALG13	0	genome.wustl.edu	37	X	110988126	110988126	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	X	110988126	110988126	C	A	SNP	ALG13	ENST00000394780	human	ensembl	74_37	+1	putative	missense	c.2926	p.P976T	0.999	NULL	pfam_Glyco_trans_28_C,pfam_OTU,pfscan_OTU,pfscan_Tudor	-	no_errors	ALG13	HGNC	ENSG00000101901				30	0	0	28	3	9.67742
NUDT17	0	genome.wustl.edu	37	1	145588424	145588424	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	1	145588424	145588424	T	-	DEL	NUDT17	ENST00000334513	human	ensembl	74_37	-1	known	frame_shift_del	c.449	p.H150fs	0.999	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT17	HGNC	ENSG00000186364				201	0	0	161	15	8.52273
MUC6	0	genome.wustl.edu	37	11	1016412	1016414	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	11	1016412	1016414	GAG	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	in_frame_del	c.6389_6387	p.S2130in_frame_del	0.002:0.002:0.018	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				69	0	0	38	6	13.6364
MUC6	0	genome.wustl.edu	37	11	1017246	1017251	+	In_Frame_Del	DEL	GTACTT	GTACTT	-			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	GTACTT	GTACTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	11	1017246	1017251	GTACTT	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	in_frame_del	c.5555_5550	p.ST1851in_frame_del	0.005:0.001:0.000:0.000:0.006:0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				1104	0	0	619	44	6.6365
ORAI1	0	genome.wustl.edu	37	12	122078977	122078982	+	In_Frame_Del	DEL	GACCAC	GACCAC	-			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	GACCAC	GACCAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	12	122078977	122078982	GACCAC	-	DEL	ORAI1	ENST00000330079	human	ensembl	74_37	+1	known	in_frame_del	c.340_345	p.HD115in_frame_del	0.278:0.260:0.004:0.976:0.999:0.990	pfam_CRAC_channel	pfam_CRAC_channel	-	no_errors	ORAI1	HGNC	ENSG00000182500				43	0	0	37	6	13.9535
SHARPIN	0	genome.wustl.edu	37	8	145154720	145154720	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-4475-01A-01D-1158-08	TCGA-CG-4475-10A-01D-1158-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e11c7c6f-b094-4085-9982-f59dc50a8d5b	5977bd46-27a4-4c94-9ad2-7c6cc053d322	8	145154720	145154720	G	-	DEL	SHARPIN	ENST00000398712	human	ensembl	74_37	-1	known	frame_shift_del	c.545	p.A182fs	0.965	NULL	pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	SHARPIN	HGNC	ENSG00000179526				170	0	0	175	33	15.8654
