Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
HIST2H2BA	0	genome.wustl.edu	37	1	120906195	120906195	+	RNA	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	120906195	120906195	C	A	SNP	HIST2H2BA	ENST00000430394	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HIST2H2BA	HGNC	ENSG00000223345				259	0	0	163	40	19.7044
DHRS3	0	genome.wustl.edu	37	1	12638806	12638806	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	12638806	12638806	C	T	SNP	DHRS3	ENST00000376223	human	ensembl	74_37	-1	known	missense	c.638	p.S213N	0.971	smart_PKS/FAS_KR,prints_Glc/ribitol_DH	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Polysac_CapD-like,smart_PKS/FAS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	DHRS3	HGNC	ENSG00000162496				53	0	0	51	18	26.087
NBPF10	0	genome.wustl.edu	37	1	145301732	145301732	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	145301732	145301732	G	A	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.1001	p.C334Y	0.000	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386				725	0	0	635	53	7.70349
KCNT2	0	genome.wustl.edu	37	1	196398783	196398783	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	196398783	196398783	A	G	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.743	p.V248A	1.000	pfam_2pore_dom_K_chnl_dom	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687				87	0	0	84	26	23.6364
CFHR4	0	genome.wustl.edu	37	1	196887428	196887428	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	196887428	196887428	G	A	SNP	CFHR4	ENST00000367416	human	ensembl	74_37	+1	known	silent	c.1626	p.G542	0.248	superfamily_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR4	HGNC	ENSG00000134365				171	0	0	132	98	42.6087
PTPRC	0	genome.wustl.edu	37	1	198703498	198703498	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	198703498	198703498	T	C	SNP	PTPRC	ENST00000442510	human	ensembl	74_37	+1	known	missense	c.2221	p.W741R	1.000	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC	ENSG00000081237				546	0	0	690	154	18.2464
EPHA8	0	genome.wustl.edu	37	1	22922618	22922618	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	22922618	22922618	G	A	SNP	EPHA8	ENST00000166244	human	ensembl	74_37	+1	known	missense	c.1717	p.A573T	1.000	pirsf_Tyr_kinase_ephrin_rcpt	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA8	HGNC	ENSG00000070886				69	0	0	58	20	25.641
ACTRT2	0	genome.wustl.edu	37	1	2938675	2938675	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	2938675	2938675	C	A	SNP	ACTRT2	ENST00000378404	human	ensembl	74_37	+1	known	missense	c.425	p.A142E	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT2	HGNC	ENSG00000169717				86	0	0	58	23	28.3951
BAI2	0	genome.wustl.edu	37	1	32207043	32207043	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	32207043	32207043	G	A	SNP	BAI2	ENST00000373658	human	ensembl	74_37	-1	known	silent	c.1725	p.G575	0.012	smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753				29	0	0	9	4	30.7692
CHD5	0	genome.wustl.edu	37	1	6189111	6189111	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	6189111	6189111	G	A	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	missense	c.3406	p.R1136C	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254				46	0	0	37	10	21.2766
CNNM2	0	genome.wustl.edu	37	10	104809484	104809484	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	10	104809484	104809484	G	A	SNP	CNNM2	ENST00000369878	human	ensembl	74_37	+1	known	missense	c.1642	p.V548M	1.000	NULL	pfam_DUF21,superfamily_cNMP-bd-like	-	no_errors	CNNM2	HGNC	ENSG00000148842				222	0	0	133	58	30.3665
ADD3	0	genome.wustl.edu	37	10	111860438	111860438	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	10	111860438	111860438	G	A	SNP	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	silent	c.27	p.V9	1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700				57	0	0	56	14	20
ARHGAP21	0	genome.wustl.edu	37	10	24874724	24874724	+	Silent	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	10	24874724	24874724	C	T	SNP	ARHGAP21	ENST00000396432	human	ensembl	74_37	-1	known	silent	c.4494	p.T1498	0.000	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP21	HGNC	ENSG00000107863				604	0	0	319	121	27.5
GALNT18	0	genome.wustl.edu	37	11	11400736	11400736	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	11	11400736	11400736	C	T	SNP	GALNT18	ENST00000227756	human	ensembl	74_37	-1	known	missense	c.671	p.R224H	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT18	HGNC	ENSG00000110328				116	0	0	54	23	29.8701
MUC15	0	genome.wustl.edu	37	11	26586967	26586967	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	11	26586967	26586967	C	T	SNP	MUC15	ENST00000436318	human	ensembl	74_37	-1	known	missense	c.520	p.E174K	0.039	NULL	NULL	-	no_errors	MUC15	HGNC	ENSG00000169550				255	0	0	154	52	25.2427
KCNA4	0	genome.wustl.edu	37	11	30033281	30033281	+	Silent	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	11	30033281	30033281	C	T	SNP	KCNA4	ENST00000328224	human	ensembl	74_37	-1	known	silent	c.945	p.L315	1.000	prints_K_chnl	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255				209	1	0.47619	112	34	23.2877
OR51D1	0	genome.wustl.edu	37	11	4661733	4661733	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	11	4661733	4661733	T	C	SNP	OR51D1	ENST00000357605	human	ensembl	74_37	+1	known	missense	c.713	p.V238A	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51D1	HGNC	ENSG00000197428				242	0	0	136	40	22.7273
GDPD4	0	genome.wustl.edu	37	11	76956374	76956374	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	11	76956374	76956374	G	A	SNP	GDPD4	ENST00000376217	human	ensembl	74_37	-1	known	silent	c.1038	p.V346	0.003	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD4	HGNC	ENSG00000178795				247	0	0	144	56	28
TMTC2	0	genome.wustl.edu	37	12	83526052	83526052	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	12	83526052	83526052	G	A	SNP	TMTC2	ENST00000321196	human	ensembl	74_37	+1	known	missense	c.2395	p.E799K	1.000	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_TPR-4,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC2	HGNC	ENSG00000179104				80	0	0	29	11	27.5
A2M	0	genome.wustl.edu	37	12	9222365	9222365	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	12	9222365	9222365	G	T	SNP	A2M	ENST00000318602	human	ensembl	74_37	-1	known	missense	c.4239	p.N1413K	1.000	pfam_A-macroglobulin_rcpt-bd,superfamily_A-macroglobulin_rcpt-bd	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,superfamily_Beta-lactam/transpept-like,superfamily_Cupredoxin	-	no_errors	A2M	HGNC	ENSG00000175899				270	1	0.369004	199	60	23.166
OR4N5	0	genome.wustl.edu	37	14	20612757	20612757	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	14	20612757	20612757	C	T	SNP	OR4N5	ENST00000333629	human	ensembl	74_37	+1	known	missense	c.863	p.T288M	0.961	prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR4N5	HGNC	ENSG00000184394				343	0	0	297	154	34.1463
RNASE4	0	genome.wustl.edu	37	14	21167713	21167713	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	14	21167713	21167713	G	A	SNP	RNASE4	ENST00000304704	human	ensembl	74_37	+1	known	silent	c.183	p.K61	0.998	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE4	HGNC	ENSG00000258818				281	0	0	293	56	16.0458
HECTD1	0	genome.wustl.edu	37	14	31598579	31598579	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	14	31598579	31598579	T	C	SNP	HECTD1	ENST00000399332	human	ensembl	74_37	-1	known	missense	c.3998	p.K1333R	1.000	pfam_Mib_Herc2	pfam_HECT,pfam_Sad1_UNC_C,pfam_Mib_Herc2,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,superfamily_Galactose-bd-like,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT	-	no_errors	HECTD1	HGNC	ENSG00000092148				170	1	0.584795	58	96	62.3377
FSCB	0	genome.wustl.edu	37	14	44975349	44975349	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	14	44975349	44975349	G	A	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.842	p.A281V	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139				196	0	0	46	66	58.9286
SIPA1L1	0	genome.wustl.edu	37	14	72152300	72152300	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	14	72152300	72152300	C	A	SNP	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	missense	c.3326	p.A1109D	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555				79	0	0	39	45	53.5714
ATP10A	0	genome.wustl.edu	37	15	25963546	25963546	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	15	25963546	25963546	G	A	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.1364	p.A455V	1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190				11	0	0	11	3	21.4286
ENSG00000187812	0	genome.wustl.edu	37	15	76074470	76074470	+	RNA	SNP	A	A	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	15	76074470	76074470	A	G	SNP	ENSG00000187812	ENST00000395215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.030	-	-	-	no_errors	RP11-24M17.5	Clone_based_vega_gene	ENSG00000187812				47	0	0	34	4	10.5263
PEAK1	0	genome.wustl.edu	37	15	77473569	77473569	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	15	77473569	77473569	C	T	SNP	PEAK1	ENST00000312493	human	ensembl	74_37	-1	known	missense	c.700	p.E234K	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	PEAK1	HGNC	ENSG00000173517				349	0	0	206	80	27.972
SSTR5	0	genome.wustl.edu	37	16	1129842	1129842	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	16	1129842	1129842	C	T	SNP	SSTR5	ENST00000293897	human	ensembl	74_37	+1	known	missense	c.974	p.S325F	0.080	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt_5,prints_Somatstn_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt	-	no_errors	SSTR5	HGNC	ENSG00000162009				38	0	0	20	7	25.9259
MKL2	0	genome.wustl.edu	37	16	14345840	14345840	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	16	14345840	14345840	C	T	SNP	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	missense	c.2492	p.P831L	0.012	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260				231	0	0	160	48	23.0769
SMG1	0	genome.wustl.edu	37	16	18828719	18828719	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	16	18828719	18828719	T	C	SNP	SMG1	ENST00000389467	human	ensembl	74_37	-1	known	missense	c.9971	p.D3324G	1.000	NULL	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106				26	0	0	12	8	40
CLEC18C	0	genome.wustl.edu	37	16	70211226	70211226	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	16	70211226	70211226	T	C	SNP	CLEC18C	ENST00000314151	human	ensembl	74_37	+1	known	missense	c.299	p.L100P	0.000	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1	pfam_C-type_lectin,pfam_CAP_domain,superfamily_CAP_domain,superfamily_C-type_lectin_fold,smart_Allrgn_V5/Tpx1,smart_EG-like_dom,smart_C-type_lectin,prints_Allrgn_V5/Tpx1,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CLEC18C	HGNC	ENSG00000157335				22	0	0	12	3	20
SSH2	0	genome.wustl.edu	37	17	27958032	27958032	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	17	27958032	27958032	T	G	SNP	SSH2	ENST00000269033	human	ensembl	74_37	-1	known	missense	c.4099	p.S1367R	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH2	HGNC	ENSG00000141298				277	0	0	148	10	6.32911
KCNJ2	0	genome.wustl.edu	37	17	68171975	68171975	+	Silent	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	17	68171975	68171975	C	T	SNP	KCNJ2	ENST00000243457	human	ensembl	74_37	+1	known	silent	c.795	p.S265	0.159	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.1	-	no_errors	KCNJ2	HGNC	ENSG00000123700				202	0	0	122	33	21.2903
CASKIN2	0	genome.wustl.edu	37	17	73499201	73499201	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	17	73499201	73499201	C	G	SNP	CASKIN2	ENST00000321617	human	ensembl	74_37	-1	known	missense	c.1954	p.E652Q	1.000	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_SH3_domain,prints_Ankyrin_rpt	-	no_errors	CASKIN2	HGNC	ENSG00000177303				16	0	0	6	5	45.4545
TP53	0	genome.wustl.edu	37	17	7578556	7578556	+	Splice_Site	SNP	T	T	C			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	17	7578556	7578556	T	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	splice_site	c.376-2	e4-2	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510				65	0	0	20	20	50
CHD3	0	genome.wustl.edu	37	17	7797156	7797156	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	17	7797156	7797156	G	A	SNP	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	missense	c.827	p.R276Q	1.000	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				320	0	0	262	79	23.1672
PIEZO2	0	genome.wustl.edu	37	18	10681657	10681657	+	Splice_Site	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	18	10681657	10681657	C	T	SNP	PIEZO2	ENST00000582913	human	ensembl	74_37	-1	known	splice_site	c.4422+1	e30+1	1.000	-	-	-	no_errors	PIEZO2	HGNC	ENSG00000154864				278	0	0	158	58	26.8519
MC5R	0	genome.wustl.edu	37	18	13825858	13825858	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	18	13825858	13825858	C	A	SNP	MC5R	ENST00000324750	human	ensembl	74_37	+1	known	missense	c.94	p.P32T	0.004	prints_Melancort_rcpt_5	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melancort_rcpt_5,prints_Melcrt_ACTH_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC5R	HGNC	ENSG00000176136				167	0	0	93	39	29.5455
EPG5	0	genome.wustl.edu	37	18	43510778	43510778	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	18	43510778	43510778	T	A	SNP	EPG5	ENST00000282041	human	ensembl	74_37	-1	known	missense	c.2276	p.N759I	0.990	NULL	NULL	-	no_errors	EPG5	HGNC	ENSG00000152223				99	0	0	32	46	58.9744
CD22	0	genome.wustl.edu	37	19	35836516	35836516	+	Silent	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	19	35836516	35836516	C	T	SNP	CD22	ENST00000085219	human	ensembl	74_37	+1	known	silent	c.2220	p.A740	0.029	NULL	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD22	HGNC	ENSG00000012124				118	0	0	50	18	26.4706
RYR1	0	genome.wustl.edu	37	19	38976765	38976765	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	19	38976765	38976765	C	A	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.5470	p.Q1824K	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				180	0	0	96	36	27.2727
LILRA5	0	genome.wustl.edu	37	19	54818815	54818815	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	19	54818815	54818815	G	A	SNP	LILRA5	ENST00000301219	human	ensembl	74_37	-1	known	silent	c.783	p.Y261	0.005	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	LILRA5	HGNC	ENSG00000187116				149	0	0	93	19	16.9643
ZNF264	0	genome.wustl.edu	37	19	57724120	57724120	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	19	57724120	57724120	C	T	SNP	ZNF264	ENST00000263095	human	ensembl	74_37	+1	known	missense	c.1655	p.S552L	0.684	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF264	HGNC	ENSG00000083844				158	0	0	106	37	25.8741
MAP2K7	0	genome.wustl.edu	37	19	7977035	7977035	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	19	7977035	7977035	C	T	SNP	MAP2K7	ENST00000545011	human	ensembl	74_37	+1	known	missense	c.1207	p.L403F	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K7	HGNC	ENSG00000076984				164	0	0	83	7	7.77778
POTEJ	0	genome.wustl.edu	37	2	131415102	131415102	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	131415102	131415102	G	A	SNP	POTEJ	ENST00000409602	human	ensembl	74_37	+1	novel	silent	c.2769	p.A923	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEJ	HGNC	ENSG00000222038				94	0	0	108	42	28
TPO	0	genome.wustl.edu	37	2	1437238	1437238	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	1437238	1437238	C	A	SNP	TPO	ENST00000329066	human	ensembl	74_37	+1	known	missense	c.208	p.P70T	0.582	NULL	pfam_Haem_peroxidase_animal,pfam_EGF-like_Ca-bd_dom,superfamily_Haem_peroxidase,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	TPO	HGNC	ENSG00000115705				121	0	0	77	78	50.3226
KIAA1715	0	genome.wustl.edu	37	2	176844567	176844567	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	176844567	176844567	A	G	SNP	KIAA1715	ENST00000544803	human	ensembl	74_37	-1	known	missense	c.287	p.F96S	1.000	NULL	pfam_DUF2296	-	no_errors	KIAA1715	HGNC	ENSG00000144320				29	0	0	72	4	5.26316
GPR55	0	genome.wustl.edu	37	2	231775023	231775023	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	231775023	231775023	C	A	SNP	GPR55	ENST00000392039	human	ensembl	74_37	-1	known	missense	c.655	p.V219L	0.190	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR55	HGNC	ENSG00000135898				158	0	0	77	68	46.8966
AQP12A	0	genome.wustl.edu	37	2	241631398	241631398	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	241631398	241631398	G	A	SNP	AQP12A	ENST00000429564	human	ensembl	74_37	+1	known	missense	c.68	p.R23Q	0.774	pirsf_Aquaporin_11/12,prints_Aquaporin_12	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_Aquaporin_12,prints_MIP	-	no_errors	AQP12A	HGNC	ENSG00000184945				81	0	0	84	9	9.67742
BIRC6	0	genome.wustl.edu	37	2	32715111	32715111	+	Nonsense_Mutation	SNP	C	C	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	32715111	32715111	C	G	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	nonsense	c.8099	p.S2700*	1.000	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760				294	0	0	245	83	25.3049
GPATCH11	0	genome.wustl.edu	37	2	37321291	37321291	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	37321291	37321291	G	A	SNP	GPATCH11	ENST00000409774	human	ensembl	74_37	+1	known	missense	c.673	p.E225K	1.000	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH11	HGNC	ENSG00000152133				9	0	0	10	5	33.3333
SIX3	0	genome.wustl.edu	37	2	45170028	45170028	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	45170028	45170028	G	A	SNP	SIX3	ENST00000260653	human	ensembl	74_37	+1	known	missense	c.785	p.R262H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX3	HGNC	ENSG00000138083				33	0	0	11	13	54.1667
SUCLG1	0	genome.wustl.edu	37	2	84670454	84670454	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	84670454	84670454	C	T	SNP	SUCLG1	ENST00000393868	human	ensembl	74_37	-1	known	missense	c.272	p.G91E	1.000	pfam_CoA-bd,smart_CoA-bd,pirsf_CoA_lig_alpha,tigrfam_CoA_lig_alpha	pfam_CoA-bd,pfam_CoA_ligase,superfamily_Succinyl-CoA_synth-like,smart_CoA-bd,pirsf_CoA_lig_alpha,prints_CoA_lig_alpha,tigrfam_CoA_lig_alpha	-	no_errors	SUCLG1	HGNC	ENSG00000163541				138	0	0	128	37	22.4242
ELMOD3	0	genome.wustl.edu	37	2	85598245	85598245	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	85598245	85598245	G	A	SNP	ELMOD3	ENST00000315658	human	ensembl	74_37	+1	known	missense	c.397	p.A133T	0.623	NULL	pfam_Engulfment_cell_motility_ELMO	-	no_errors	ELMOD3	HGNC	ENSG00000115459				168	0	0	101	99	49.5
CNGA3	0	genome.wustl.edu	37	2	99008435	99008435	+	Splice_Site	SNP	T	T	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	99008435	99008435	T	A	SNP	CNGA3	ENST00000272602	human	ensembl	74_37	+1	known	splice_site	c.673+2	e6+2	1.000	-	-	-	no_errors	CNGA3	HGNC	ENSG00000144191				78	0	0	44	24	35.2941
MKKS	0	genome.wustl.edu	37	20	10389282	10389282	+	Silent	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	20	10389282	10389282	C	T	SNP	MKKS	ENST00000347364	human	ensembl	74_37	-1	known	silent	c.1155	p.E385	0.987	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	-	no_errors	MKKS	HGNC	ENSG00000125863				134	0	0	108	31	22.3022
ZSWIM3	0	genome.wustl.edu	37	20	44506535	44506535	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	20	44506535	44506535	G	A	SNP	ZSWIM3	ENST00000255152	human	ensembl	74_37	+1	known	silent	c.1338	p.P446	0.003	NULL	pfam_Znf_SWIM,pfam_MULE_transposase_dom,pfam_Transposase,smart_Znf_PMZ,pfscan_Znf_SWIM	-	no_errors	ZSWIM3	HGNC	ENSG00000132801				83	0	0	77	19	19.7917
SYNJ1	0	genome.wustl.edu	37	21	34042633	34042633	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	21	34042633	34042633	C	T	SNP	SYNJ1	ENST00000433931	human	ensembl	74_37	-1	known	missense	c.1893	p.M631I	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Syja_N,pfam_Endo/exonuclease/phosphatase,pfam_DUF1866,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ1	HGNC	ENSG00000159082				88	0	0	52	17	24.6377
TTC3	0	genome.wustl.edu	37	21	38494156	38494156	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	21	38494156	38494156	G	A	SNP	TTC3	ENST00000354749	human	ensembl	74_37	+1	known	missense	c.940	p.E314K	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like_dom,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670				106	0	0	70	26	27.0833
RFPL2	0	genome.wustl.edu	37	22	32587233	32587233	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	22	32587233	32587233	G	A	SNP	RFPL2	ENST00000400237	human	ensembl	74_37	-1	known	silent	c.663	p.A221	0.933	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	RFPL2	HGNC	ENSG00000128253				192	0	0	134	27	16.7702
TNRC6B	0	genome.wustl.edu	37	22	40711358	40711358	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	22	40711358	40711358	A	G	SNP	TNRC6B	ENST00000454349	human	ensembl	74_37	+1	known	missense	c.4750	p.K1584E	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354				96	0	0	51	23	31.0811
ATXN10	0	genome.wustl.edu	37	22	46125373	46125373	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	22	46125373	46125373	C	G	SNP	ATXN10	ENST00000252934	human	ensembl	74_37	+1	known	missense	c.797	p.P266R	0.016	superfamily_ARM-type_fold	pfam_Ataxin-10_domain,superfamily_ARM-type_fold	-	no_errors	ATXN10	HGNC	ENSG00000130638				233	0	0	151	40	20.9424
ALCAM	0	genome.wustl.edu	37	3	105266363	105266363	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	3	105266363	105266363	A	G	SNP	ALCAM	ENST00000306107	human	ensembl	74_37	+1	known	missense	c.1370	p.N457S	1.000	smart_Ig_sub2,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	ALCAM	HGNC	ENSG00000170017				253	0	0	197	57	22.4409
ARHGAP31	0	genome.wustl.edu	37	3	119118073	119118073	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	3	119118073	119118073	A	T	SNP	ARHGAP31	ENST00000264245	human	ensembl	74_37	+1	known	missense	c.1034	p.K345I	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081				120	0	0	78	29	27.1028
DZIP1L	0	genome.wustl.edu	37	3	137822729	137822729	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	3	137822729	137822729	G	A	SNP	DZIP1L	ENST00000327532	human	ensembl	74_37	-1	known	missense	c.85	p.R29C	0.969	NULL	pfscan_Znf_C2H2	-	no_errors	DZIP1L	HGNC	ENSG00000158163				196	0	0	102	49	32.4503
SDHAP1	0	genome.wustl.edu	37	3	195692347	195692347	+	RNA	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	3	195692347	195692347	G	A	SNP	SDHAP1	ENST00000354559	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SDHAP1	HGNC	ENSG00000185485				24	0	0	25	3	10.7143
CNTN4	0	genome.wustl.edu	37	3	3078938	3078938	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	3	3078938	3078938	G	A	SNP	CNTN4	ENST00000397461	human	ensembl	74_37	+1	known	missense	c.2018	p.R673H	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN4	HGNC	ENSG00000144619				365	2	0.544959	206	94	31.3333
PTH1R	0	genome.wustl.edu	37	3	46937225	46937225	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	3	46937225	46937225	C	G	SNP	PTH1R	ENST00000313049	human	ensembl	74_37	+1	known	missense	c.179	p.A60G	0.243	pfscan_GPCR_2_extracellular_dom	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_parathyroid_rcpt	-	no_errors	PTH1R	HGNC	ENSG00000160801				142	0	0	93	19	16.9643
PTH1R	0	genome.wustl.edu	37	3	46937234	46937234	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	3	46937234	46937234	T	G	SNP	PTH1R	ENST00000313049	human	ensembl	74_37	+1	known	missense	c.188	p.M63R	0.998	pfscan_GPCR_2_extracellular_dom	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_parathyroid_rcpt	-	no_errors	PTH1R	HGNC	ENSG00000160801				148	0	0	90	17	15.8879
ITPR1	0	genome.wustl.edu	37	3	4744539	4744539	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	3	4744539	4744539	T	C	SNP	ITPR1	ENST00000302640	human	ensembl	74_37	+1	known	missense	c.4517	p.L1506P	1.000	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995				55	0	0	39	10	20.4082
ACSL1	0	genome.wustl.edu	37	4	185689562	185689562	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	4	185689562	185689562	C	G	SNP	ACSL1	ENST00000281455	human	ensembl	74_37	-1	known	missense	c.1036	p.G346R	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL1	HGNC	ENSG00000151726				331	0	0	203	64	23.97
SLIT2	0	genome.wustl.edu	37	4	20530620	20530620	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	4	20530620	20530620	T	A	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.1511	p.L504Q	1.000	NULL	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				225	0	0	179	14	7.25389
YTHDC1	0	genome.wustl.edu	37	4	69179894	69179894	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	4	69179894	69179894	G	A	SNP	YTHDC1	ENST00000344157	human	ensembl	74_37	-1	known	missense	c.2107	p.R703C	1.000	NULL	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDC1	HGNC	ENSG00000083896				62	0	0	42	10	19.2308
ZNF595	0	genome.wustl.edu	37	4	87098	87098	+	RNA	SNP	A	A	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	4	87098	87098	A	G	SNP	ZNF595	ENST00000339368	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.159	-	-	-	no_errors	ZNF595	HGNC	ENSG00000197701				97	0	0	71	20	21.978
PCDHGA6	0	genome.wustl.edu	37	5	140755889	140755889	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	5	140755889	140755889	C	T	SNP	PCDHGA6	ENST00000517434	human	ensembl	74_37	+1	known	missense	c.2239	p.R747W	0.986	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA6	HGNC	ENSG00000253731				135	0	0	42	23	35.3846
ZNF300	0	genome.wustl.edu	37	5	150275535	150275535	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	5	150275535	150275535	G	A	SNP	ZNF300	ENST00000446148	human	ensembl	74_37	-1	known	silent	c.1314	p.S438	0.003	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF300	HGNC	ENSG00000145908				137	0	0	78	40	33.8983
ADCY2	0	genome.wustl.edu	37	5	7521010	7521010	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	5	7521010	7521010	C	A	SNP	ADCY2	ENST00000338316	human	ensembl	74_37	+1	known	missense	c.568	p.Q190K	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY2	HGNC	ENSG00000078295				162	0	0	180	22	10.8911
ACOT12	0	genome.wustl.edu	37	5	80641711	80641711	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	5	80641711	80641711	G	T	SNP	ACOT12	ENST00000307624	human	ensembl	74_37	-1	known	missense	c.766	p.Q256K	1.000	pfam_Thioestr_supf	pfam_Thioestr_supf,pfam_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	ACOT12	HGNC	ENSG00000172497				139	0	0	40	30	42.8571
GRM1	0	genome.wustl.edu	37	6	146678789	146678789	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	6	146678789	146678789	C	T	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.1561	p.R521W	0.994	pfam_GPCR_3_9-Cys_dom	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				117	0	0	79	31	28.1818
SYNE1	0	genome.wustl.edu	37	6	152652266	152652266	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	6	152652266	152652266	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.13554	p.R4518	0.020	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				373	1	0.26738	225	76	25.2492
SYNE1	0	genome.wustl.edu	37	6	152748759	152748759	+	Silent	SNP	T	T	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	6	152748759	152748759	T	G	SNP	SYNE1	ENST00000367253	human	ensembl	74_37	-1	novel	silent	c.5169	p.I1723	0.000	NULL	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain	-	no_errors	SYNE1	HGNC	ENSG00000131018				65	0	0	29	37	56.0606
ZSCAN31	0	genome.wustl.edu	37	6	28294157	28294157	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	6	28294157	28294157	G	A	SNP	ZSCAN31	ENST00000344279	human	ensembl	74_37	-1	known	missense	c.1007	p.S336L	0.006	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN31	HGNC	ENSG00000235109				524	0	0	272	100	26.8817
OR11A1	0	genome.wustl.edu	37	6	29394891	29394891	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	6	29394891	29394891	G	T	SNP	OR11A1	ENST00000377147	human	ensembl	74_37	-1	known	missense	c.528	p.D176E	0.028	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR11A1	HGNC	ENSG00000204694				77	0	0	39	20	33.8983
HLA-F	0	genome.wustl.edu	37	6	29692871	29692871	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	6	29692871	29692871	G	T	SNP	HLA-F	ENST00000259951	human	ensembl	74_37	+1	known	missense	c.674	p.W225L	1.000	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-F	HGNC	ENSG00000204642				97	0	0	44	24	35.2941
HLA-A	0	genome.wustl.edu	37	6	29911302	29911302	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	6	29911302	29911302	G	A	SNP	HLA-A	ENST00000376806	human	ensembl	74_37	+1	known	missense	c.601	p.E201K	0.975	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-A	HGNC	ENSG00000206503				44	0	0	26	5	16.129
PKHD1	0	genome.wustl.edu	37	6	51907736	51907736	+	Silent	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	6	51907736	51907736	G	A	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	silent	c.3018	p.I1006	0.027	superfamily_Ig_E-set	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				201	0	0	126	96	43.2432
RELN	0	genome.wustl.edu	37	7	103141292	103141292	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	7	103141292	103141292	C	A	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.8567	p.C2856F	1.000	pfam_EGF_extracell,superfamily_Sialidases,smart_EG-like_dom	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				271	0	0	251	67	21.0692
MGAM	0	genome.wustl.edu	37	7	141631645	141631645	+	RNA	SNP	T	T	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	7	141631645	141631645	T	A	SNP	MGAM	ENST00000497554	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MGAM	HGNC	ENSG00000257335				121	0	0	109	25	18.6567
MACC1	0	genome.wustl.edu	37	7	20198397	20198397	+	Silent	SNP	A	A	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	7	20198397	20198397	A	T	SNP	MACC1	ENST00000332878	human	ensembl	74_37	-1	known	silent	c.1587	p.S529	0.028	NULL	pfam_SH3_2,superfamily_DEATH-like_dom	-	no_errors	MACC1	HGNC	ENSG00000183742				324	0	0	272	73	21.1594
IGFBP1	0	genome.wustl.edu	37	7	45931540	45931540	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	7	45931540	45931540	C	T	SNP	IGFBP1	ENST00000275525	human	ensembl	74_37	+1	known	nonsense	c.529	p.R177*	0.990	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,pfscan_Thyroglobulin_1,prints_IGFBP_1-6_chordata	pfam_Thyroglobulin_1,pfam_IGFBP-like,superfamily_Thyroglobulin_1,superfamily_Growth_fac_rcpt_N_dom,smart_IGFBP-like,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1,prints_IGFBP_1-6_chordata,prints_IGFBP1	-	no_errors	IGFBP1	HGNC	ENSG00000146678				96	0	0	76	11	12.6437
RHBDD2	0	genome.wustl.edu	37	7	75517437	75517437	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	7	75517437	75517437	G	A	SNP	RHBDD2	ENST00000006777	human	ensembl	74_37	+1	known	missense	c.865	p.G289R	0.327	NULL	pfam_Peptidase_S54_rhomboid_dom	-	no_errors	RHBDD2	HGNC	ENSG00000005486				239	1	0.416667	195	56	22.3108
PCLO	0	genome.wustl.edu	37	7	82584541	82584541	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	7	82584541	82584541	C	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.5728	p.A1910S	0.006	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				119	0	0	74	17	18.6813
PCLO	0	genome.wustl.edu	37	7	82784814	82784814	+	Silent	SNP	A	A	C			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	7	82784814	82784814	A	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.1143	p.P381	0.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				123	0	0	104	26	20
LMTK2	0	genome.wustl.edu	37	7	97800978	97800978	+	Silent	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	7	97800978	97800978	C	T	SNP	LMTK2	ENST00000297293	human	ensembl	74_37	+1	known	silent	c.783	p.F261	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK2	HGNC	ENSG00000164715				58	0	0	41	8	16.3265
DGAT1	0	genome.wustl.edu	37	8	145540279	145540279	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	8	145540279	145540279	C	T	SNP	DGAT1	ENST00000332324	human	ensembl	74_37	-1	known	missense	c.1405	p.V469I	0.999	pfam_MBOAT_fam	pfam_MBOAT_fam,superfamily_PEP-util_enz_mobile_dom	-	no_errors	DGAT1	HGNC	ENSG00000185000				12	0	0	14	14	50
RHOBTB2	0	genome.wustl.edu	37	8	22874894	22874894	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	8	22874894	22874894	G	A	SNP	RHOBTB2	ENST00000251822	human	ensembl	74_37	+1	known	missense	c.2096	p.R699Q	1.000	NULL	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB2	HGNC	ENSG00000008853				69	0	0	18	20	52.6316
WDR5	0	genome.wustl.edu	37	9	137007762	137007762	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	9	137007762	137007762	A	G	SNP	WDR5	ENST00000358625	human	ensembl	74_37	+1	known	missense	c.449	p.D150G	1.000	pfam_WD40_repeat,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR5	HGNC	ENSG00000196363				154	0	0	88	23	20.7207
SPATA31A6	0	genome.wustl.edu	37	9	43626810	43626810	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	9	43626810	43626810	G	A	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	missense	c.1877	p.S626L	0.003	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775				237	0	0	61	33	35.1064
DMRT1	0	genome.wustl.edu	37	9	894128	894128	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	9	894128	894128	C	T	SNP	DMRT1	ENST00000382276	human	ensembl	74_37	+1	known	missense	c.755	p.P252L	0.996	NULL	pfam_DM_DNA-bd,pfam_DMRT1-like,superfamily_DM_DNA-bd,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRT1	HGNC	ENSG00000137090				189	0	0	73	49	40.1639
RHOXF1	0	genome.wustl.edu	37	X	119243203	119243203	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	X	119243203	119243203	C	T	SNP	RHOXF1	ENST00000217999	human	ensembl	74_37	-1	known	missense	c.502	p.A168T	0.000	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	RHOXF1	HGNC	ENSG00000101883				150	0	0	113	27	19.2857
DCAF12L1	0	genome.wustl.edu	37	X	125685718	125685718	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	X	125685718	125685718	C	T	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	missense	c.874	p.G292R	0.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				123	0	0	82	27	24.7706
PLXNB3	0	genome.wustl.edu	37	X	153044076	153044076	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	X	153044076	153044076	T	G	SNP	PLXNB3	ENST00000538966	human	ensembl	74_37	+1	known	missense	c.5641	p.C1881G	0.797	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Plexin_repeat,pfam_Semap_dom,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB3	HGNC	ENSG00000198753				29	0	0	10	4	28.5714
ATP6AP1	0	genome.wustl.edu	37	X	153661991	153661991	+	Silent	SNP	C	C	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	X	153661991	153661991	C	A	SNP	ATP6AP1	ENST00000369762	human	ensembl	74_37	+1	known	silent	c.609	p.I203	0.356	pfam_BIG/ATPase_V1_suS1	pfam_BIG/ATPase_V1_suS1	-	no_errors	ATP6AP1	HGNC	ENSG00000071553				114	0	0	100	30	23.0769
CNKSR2	0	genome.wustl.edu	37	X	21581449	21581449	+	Nonsense_Mutation	SNP	C	C	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	X	21581449	21581449	C	G	SNP	CNKSR2	ENST00000379510	human	ensembl	74_37	+1	known	nonsense	c.1487	p.S496*	1.000	pfam_CNKSR2	pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM	-	no_errors	CNKSR2	HGNC	ENSG00000149970				130	0	0	79	13	14.1304
CCDC120	0	genome.wustl.edu	37	X	48920041	48920041	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	X	48920041	48920041	G	A	SNP	CCDC120	ENST00000603986	human	ensembl	74_37	+1	known	missense	c.197	p.R66H	1.000	pfam_DUF3338	pfam_DUF3338	-	no_errors	CCDC120	HGNC	ENSG00000147144				69	0	0	56	15	21.1268
XIST	0	genome.wustl.edu	37	X	73047029	73047029	+	RNA	SNP	A	A	G			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	X	73047029	73047029	A	G	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				362	0	0	240	69	22.3301
USP21	0	genome.wustl.edu	37	1	161134659	161134660	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	1	161134659	161134660	-	A	INS	USP21	ENST00000289865	human	ensembl	74_37	+1	known	frame_shift_ins	c.1419_1420	p.S475fs	1.000:1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP21	HGNC	ENSG00000143258				128	0	0	130	20	13.3333
GLIPR1L2	0	genome.wustl.edu	37	12	75816820	75816820	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	12	75816820	75816820	A	-	DEL	GLIPR1L2	ENST00000320460	human	ensembl	74_37	+1	known	frame_shift_del	c.721	p.N242fs	0.001	NULL	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	GLIPR1L2	HGNC	ENSG00000180481				146	0	0	118	32	21.3333
APOB	0	genome.wustl.edu	37	2	21238075	21238076	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	2	21238075	21238076	-	T	INS	APOB	ENST00000233242	human	ensembl	74_37	-1	known	frame_shift_ins	c.3566_3565	p.M1189fs	0.002:0.001	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				295	0	0	205	43	17.3387
APC	0	genome.wustl.edu	37	5	112170788	112170788	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5718-01A-11D-1600-08	TCGA-CG-5718-10A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6984870c-6068-43b9-963e-19c487be25fa	29dcdb6f-c7c7-4b02-9dbb-f1abf297a26a	5	112170788	112170788	T	-	DEL	APC	ENST00000257430	human	ensembl	74_37	+1	known	frame_shift_del	c.1884	p.L629fs	0.814	superfamily_ARM-type_fold,smart_Armadillo	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				120	0	0	53	31	36.9048
