Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
KIF1B	0	genome.wustl.edu	37	1	10386385	10386385	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	10386385	10386385	C	T	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	silent	c.2754	p.Y918	1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				146	1	0.680272	114	30	20.8333
PGD	0	genome.wustl.edu	37	1	10477532	10477532	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	10477532	10477532	G	A	SNP	PGD	ENST00000270776	human	ensembl	74_37	+1	known	missense	c.1075	p.A359T	1.000	pfam_6PGDH_C,superfamily_6-PGluconate_DH_C-like,tigrfam_6PGDH_decarbox	pfam_6PGDH_C,pfam_6PGDH_NADP-bd,superfamily_6-PGluconate_DH_C-like,tigrfam_6PGDH_decarbox	-	no_errors	PGD	HGNC	ENSG00000142657				203	2	0.97561	122	44	26.506
PSRC1	0	genome.wustl.edu	37	1	109823609	109823609	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	109823609	109823609	G	A	SNP	PSRC1	ENST00000409138	human	ensembl	74_37	-1	known	missense	c.784	p.R262C	0.994	NULL	NULL	-	no_errors	PSRC1	HGNC	ENSG00000134222				46	0	0	35	9	20.4545
ATXN7L2	0	genome.wustl.edu	37	1	110032913	110032913	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	110032913	110032913	G	A	SNP	ATXN7L2	ENST00000369870	human	ensembl	74_37	+1	known	silent	c.1257	p.R419	1.000	NULL	pfam_SCA7_dom	-	no_errors	ATXN7L2	HGNC	ENSG00000162650				147	0	0	88	24	21.4286
GNAI3	0	genome.wustl.edu	37	1	110129408	110129408	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	110129408	110129408	A	G	SNP	GNAI3	ENST00000369851	human	ensembl	74_37	+1	known	missense	c.778	p.T260A	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I,prints_Fungi_Gprotein_alpha	-	no_errors	GNAI3	HGNC	ENSG00000065135				145	0	0	98	24	19.6721
SLC6A17	0	genome.wustl.edu	37	1	110737297	110737297	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	110737297	110737297	C	T	SNP	SLC6A17	ENST00000331565	human	ensembl	74_37	+1	known	missense	c.1396	p.L466F	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A17	HGNC	ENSG00000197106				93	0	0	82	23	21.9048
KCNC4	0	genome.wustl.edu	37	1	110765858	110765858	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	110765858	110765858	C	T	SNP	KCNC4	ENST00000369787	human	ensembl	74_37	+1	known	silent	c.951	p.I317	0.980	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_K_chnl_volt-dep_Kv3_ID,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.4,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC4	HGNC	ENSG00000116396				93	0	0	65	20	23.5294
KCNA2	0	genome.wustl.edu	37	1	111146620	111146620	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	111146620	111146620	G	A	SNP	KCNA2	ENST00000316361	human	ensembl	74_37	-1	known	missense	c.785	p.A262V	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.2,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1.3,prints_2pore_dom_K_chnl,prints_K_chnl_volt-dep_Kv1.1	-	no_errors	KCNA2	HGNC	ENSG00000177301				147	0	0	115	29	20.1389
CHI3L2	0	genome.wustl.edu	37	1	111784915	111784915	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	111784915	111784915	A	G	SNP	CHI3L2	ENST00000369748	human	ensembl	74_37	+1	known	missense	c.1102	p.T368A	0.652	superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	CHI3L2	HGNC	ENSG00000064886				274	2	0.724638	197	49	19.9187
MTOR	0	genome.wustl.edu	37	1	11307985	11307985	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	11307985	11307985	T	C	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.1007	p.Y336C	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793				155	0	0	113	42	27.0968
UBIAD1	0	genome.wustl.edu	37	1	11345717	11345717	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	11345717	11345717	C	T	SNP	UBIAD1	ENST00000376810	human	ensembl	74_37	+1	known	silent	c.546	p.Y182	0.420	pfam_UbiA_prenyltransferase	pfam_UbiA_prenyltransferase	-	no_errors	UBIAD1	HGNC	ENSG00000120942				86	0	0	49	15	23.4375
IGSF3	0	genome.wustl.edu	37	1	117122210	117122210	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	117122210	117122210	G	A	SNP	IGSF3	ENST00000318837	human	ensembl	74_37	-1	known	silent	c.3198	p.G1066	0.973	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF3	HGNC	ENSG00000143061				56	0	0	37	14	27.451
IGSF3	0	genome.wustl.edu	37	1	117156664	117156664	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	117156664	117156664	C	T	SNP	IGSF3	ENST00000318837	human	ensembl	74_37	-1	known	silent	c.555	p.R185	1.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF3	HGNC	ENSG00000143061				98	0	0	77	15	16.3043
SPAG17	0	genome.wustl.edu	37	1	118527387	118527387	+	Silent	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	118527387	118527387	T	G	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	silent	c.5688	p.T1896	0.000	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761				172	0	0	111	21	15.9091
CLCN6	0	genome.wustl.edu	37	1	11889314	11889314	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	11889314	11889314	G	C	SNP	CLCN6	ENST00000346436	human	ensembl	74_37	+1	known	missense	c.1183	p.V395L	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-6	-	no_errors	CLCN6	HGNC	ENSG00000011021				276	1	0.361011	215	70	24.5614
WARS2	0	genome.wustl.edu	37	1	119575832	119575832	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	119575832	119575832	A	G	SNP	WARS2	ENST00000235521	human	ensembl	74_37	-1	known	missense	c.785	p.V262A	1.000	pfam_aa-tRNA-synth_Ic,tigrfam_Trp-tRNA-ligase	pfam_aa-tRNA-synth_Ic,prints_Trp-tRNA-ligase,tigrfam_Trp-tRNA-ligase	-	no_errors	WARS2	HGNC	ENSG00000116874				173	0	0	112	25	18.2482
NOTCH2	0	genome.wustl.edu	37	1	120462059	120462059	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	120462059	120462059	C	T	SNP	NOTCH2	ENST00000256646	human	ensembl	74_37	-1	known	missense	c.5657	p.R1886H	1.000	pirsf_Notch,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250				87	0	0	67	11	14.1026
VPS13D	0	genome.wustl.edu	37	1	12569099	12569099	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	12569099	12569099	C	T	SNP	VPS13D	ENST00000496628	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	VPS13D	HGNC	ENSG00000048707				140	0	0	102	30	22.7273
AADACL4	0	genome.wustl.edu	37	1	12725975	12725975	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	12725975	12725975	C	T	SNP	AADACL4	ENST00000376221	human	ensembl	74_37	+1	known	silent	c.453	p.Y151	1.000	pfam_AB_hydrolase_3,pirsf_Arylacetamide_deacetylase	pfam_AB_hydrolase_3,pirsf_Arylacetamide_deacetylase	-	no_errors	AADACL4	HGNC	ENSG00000204518				106	0	0	88	16	15.3846
HNRNPCL1	0	genome.wustl.edu	37	1	12907847	12907847	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	12907847	12907847	C	T	SNP	HNRNPCL1	ENST00000317869	human	ensembl	74_37	-1	known	missense	c.296	p.R99Q	0.999	pirsf_hnRNP_C_Raly	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	HNRNPCL1	HGNC	ENSG00000179172				257	0	0	213	26	10.8787
PRDM2	0	genome.wustl.edu	37	1	14105507	14105507	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	14105507	14105507	G	A	SNP	PRDM2	ENST00000235372	human	ensembl	74_37	+1	known	missense	c.1217	p.R406Q	0.994	smart_Znf_C2H2-like,pirsf_RIZ_retinblastoma-bd_prot,pfscan_Znf_C2H2	pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pirsf_RIZ_retinblastoma-bd_prot,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM2	HGNC	ENSG00000116731				92	0	0	61	22	26.506
PRDM2	0	genome.wustl.edu	37	1	14107336	14107336	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	14107336	14107336	G	A	SNP	PRDM2	ENST00000235372	human	ensembl	74_37	+1	known	missense	c.3046	p.A1016T	0.004	pirsf_RIZ_retinblastoma-bd_prot	pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pirsf_RIZ_retinblastoma-bd_prot,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM2	HGNC	ENSG00000116731				99	0	0	84	20	19.2308
PDE4DIP	0	genome.wustl.edu	37	1	144994711	144994711	+	Silent	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	144994711	144994711	A	C	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	silent	c.21	p.T7	1.000	pfam_Spindle_assoc	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				141	0	0	128	7	5.18519
FMO5	0	genome.wustl.edu	37	1	146696691	146696691	+	RNA	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	146696691	146696691	A	G	SNP	FMO5	ENST00000465173	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.057	-	-	-	no_errors	FMO5	HGNC	ENSG00000131781				93	0	0	87	32	26.8908
BCL9	0	genome.wustl.edu	37	1	147091961	147091961	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	147091961	147091961	G	A	SNP	BCL9	ENST00000234739	human	ensembl	74_37	+1	known	missense	c.2000	p.R667H	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128				89	0	0	47	14	22.9508
NBPF15	0	genome.wustl.edu	37	1	148594462	148594462	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	148594462	148594462	A	G	SNP	NBPF15	ENST00000369187	human	ensembl	74_37	+1	known	missense	c.1835	p.Y612C	0.001	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF15	HGNC	ENSG00000243452				637	0	0	453	128	22.031
BOLA1	0	genome.wustl.edu	37	1	149872116	149872116	+	RNA	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	149872116	149872116	G	T	SNP	BOLA1	ENST00000476344	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BOLA1	HGNC	ENSG00000178096				21	0	0	13	7	35
PLEKHO1	0	genome.wustl.edu	37	1	150128314	150128314	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	150128314	150128314	T	C	SNP	PLEKHO1	ENST00000025469	human	ensembl	74_37	+1	known	missense	c.232	p.C78R	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHO1	HGNC	ENSG00000023902				233	0	0	128	56	30.4348
SEMA6C	0	genome.wustl.edu	37	1	151109008	151109008	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	151109008	151109008	C	T	SNP	SEMA6C	ENST00000368913	human	ensembl	74_37	-1	known	missense	c.1022	p.R341H	0.589	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,pfscan_Semap_dom	-	no_errors	SEMA6C	HGNC	ENSG00000143434				266	0	0	204	51	20
HRNR	0	genome.wustl.edu	37	1	152192304	152192304	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	152192304	152192304	C	T	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.1801	p.G601R	0.004	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915				381	1	0.26178	278	89	24.2507
CRNN	0	genome.wustl.edu	37	1	152382676	152382676	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	152382676	152382676	G	A	SNP	CRNN	ENST00000271835	human	ensembl	74_37	-1	known	silent	c.882	p.H294	0.001	NULL	pfam_S100_Ca-bd_sub,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CRNN	HGNC	ENSG00000143536				372	0	0	296	89	23.1169
DENND4B	0	genome.wustl.edu	37	1	153910311	153910311	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	153910311	153910311	G	A	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	missense	c.1994	p.P665L	0.746	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837				183	0	0	135	51	27.4194
ADAR	0	genome.wustl.edu	37	1	154574993	154574993	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	154574993	154574993	T	C	SNP	ADAR	ENST00000292205	human	ensembl	74_37	-1	known	missense	c.254	p.K85R	0.995	NULL	pfam_A_deamin,pfam_dsRNA_A_deaminase,pfam_dsRNA-bd_dom,smart_dsRNA_A_deaminase,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_dsRNA_A_deaminase,pfscan_A_deamin	-	no_errors	ADAR	HGNC	ENSG00000160710				86	0	0	59	21	26.25
TRIM46	0	genome.wustl.edu	37	1	155152112	155152112	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	155152112	155152112	T	C	SNP	TRIM46	ENST00000543729	human	ensembl	74_37	+1	known	missense	c.1349	p.L450P	0.983	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box	-	no_errors	TRIM46	HGNC	ENSG00000163462				50	0	0	33	7	17.5
ARHGEF2	0	genome.wustl.edu	37	1	155920909	155920909	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	155920909	155920909	G	A	SNP	ARHGEF2	ENST00000368315	human	ensembl	74_37	-1	known	missense	c.2417	p.A806V	0.910	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF2	HGNC	ENSG00000116584				15	0	0	17	4	19.0476
MEX3A	0	genome.wustl.edu	37	1	156047125	156047125	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	156047125	156047125	A	G	SNP	MEX3A	ENST00000532414	human	ensembl	74_37	-1	known	missense	c.803	p.F268S	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3A	HGNC	ENSG00000254726				36	0	0	30	16	34.7826
HAPLN2	0	genome.wustl.edu	37	1	156593354	156593354	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	156593354	156593354	C	A	SNP	HAPLN2	ENST00000255039	human	ensembl	74_37	+1	known	silent	c.72	p.A24	0.084	NULL	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like_dom,prints_Link	-	no_errors	HAPLN2	HGNC	ENSG00000132702				34	0	0	18	7	28
ARHGEF11	0	genome.wustl.edu	37	1	156917127	156917127	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	156917127	156917127	G	A	SNP	ARHGEF11	ENST00000368194	human	ensembl	74_37	-1	known	silent	c.2457	p.F819	0.994	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_RGS-like_dom,pfam_DH-domain,pfam_PDZ,pfam_RGS_dom,superfamily_DH-domain,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_Regulat_G_prot_signal_superfam,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_DH-domain	-	no_errors	ARHGEF11	HGNC	ENSG00000132694				133	1	0.746269	90	24	21.0526
FCRL3	0	genome.wustl.edu	37	1	157665908	157665908	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	157665908	157665908	C	T	SNP	FCRL3	ENST00000492769	human	ensembl	74_37	-1	known	missense	c.1054	p.D352N	0.007	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL3	HGNC	ENSG00000160856				157	0	0	98	18	15.5172
KIRREL	0	genome.wustl.edu	37	1	158061243	158061243	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	158061243	158061243	C	T	SNP	KIRREL	ENST00000368173	human	ensembl	74_37	+1	known	silent	c.1416	p.L472	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL	HGNC	ENSG00000183853				135	0	0	97	33	25.3846
DNAJC16	0	genome.wustl.edu	37	1	15892742	15892742	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	15892742	15892742	C	T	SNP	DNAJC16	ENST00000479655	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DNAJC16	HGNC	ENSG00000116138				16	0	0	9	4	30.7692
SLAMF8	0	genome.wustl.edu	37	1	159796723	159796723	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	159796723	159796723	G	T	SNP	SLAMF8	ENST00000289707	human	ensembl	74_37	+1	known	missense	c.35	p.W12L	1.000	NULL	pfscan_Ig-like_dom	-	no_errors	SLAMF8	HGNC	ENSG00000158714				96	0	0	70	17	19.5402
SLAMF8	0	genome.wustl.edu	37	1	159799686	159799686	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	159799686	159799686	A	G	SNP	SLAMF8	ENST00000289707	human	ensembl	74_37	+1	known	missense	c.71	p.Q24R	0.951	NULL	pfscan_Ig-like_dom	-	no_errors	SLAMF8	HGNC	ENSG00000158714				229	0	0	154	60	28.0374
CCDC19	0	genome.wustl.edu	37	1	159842872	159842872	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	159842872	159842872	C	T	SNP	CCDC19	ENST00000368099	human	ensembl	74_37	-1	known	missense	c.1439	p.R480H	1.000	NULL	NULL	-	no_errors	CCDC19	HGNC	ENSG00000213085				86	0	0	69	23	25
TAGLN2	0	genome.wustl.edu	37	1	159889527	159889527	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	159889527	159889527	G	A	SNP	TAGLN2	ENST00000368096	human	ensembl	74_37	-1	known	silent	c.342	p.I114	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,prints_SM22_calponin	pfam_CH-domain,pfam_Calponin_repeat,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,pfscan_Calponin_repeat,prints_SM22_calponin	-	no_errors	TAGLN2	HGNC	ENSG00000158710				357	0	0	275	65	19.1176
IGSF9	0	genome.wustl.edu	37	1	159901412	159901412	+	RNA	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	159901412	159901412	G	T	SNP	IGSF9	ENST00000496645	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	IGSF9	HGNC	ENSG00000085552				47	0	0	37	12	24.4898
IGSF9	0	genome.wustl.edu	37	1	159912853	159912853	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	159912853	159912853	C	T	SNP	IGSF9	ENST00000368094	human	ensembl	74_37	-1	known	silent	c.147	p.R49	0.969	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9	HGNC	ENSG00000085552				22	0	0	16	8	33.3333
ATP1A2	0	genome.wustl.edu	37	1	160091015	160091015	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	160091015	160091015	C	T	SNP	ATP1A2	ENST00000361216	human	ensembl	74_37	+1	known	missense	c.151	p.R51C	1.000	pfam_ATPase_P-typ_cation-transptr_N,smart_ATPase_P-typ_cation-transptr_N,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A2	HGNC	ENSG00000018625				302	0	0	267	64	19.3353
TMEM82	0	genome.wustl.edu	37	1	16071011	16071011	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	16071011	16071011	G	A	SNP	TMEM82	ENST00000375782	human	ensembl	74_37	+1	known	silent	c.693	p.S231	0.632	NULL	NULL	-	no_errors	TMEM82	HGNC	ENSG00000162460				20	0	0	16	5	23.8095
ADAMTS4	0	genome.wustl.edu	37	1	161163532	161163532	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	161163532	161163532	G	T	SNP	ADAMTS4	ENST00000367996	human	ensembl	74_37	-1	known	silent	c.1633	p.R545	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS	pfam_ADAM_spacer1,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS4	HGNC	ENSG00000158859				139	0	0	106	35	24.8227
SDHC	0	genome.wustl.edu	37	1	161298208	161298208	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	161298208	161298208	G	A	SNP	SDHC	ENST00000367975	human	ensembl	74_37	+1	known	missense	c.100	p.A34T	1.000	pirsf_Succ_DH_cytb560	pfam_Succ_DH_Fumarate_Rdtase_TM-su,pirsf_Succ_DH_cytb560,tigrfam_Succ_DH_cytb556	-	no_errors	SDHC	HGNC	ENSG00000143252				260	0	0	168	44	20.7547
FCGR2B	0	genome.wustl.edu	37	1	161642933	161642933	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	161642933	161642933	A	G	SNP	FCGR2B	ENST00000358671	human	ensembl	74_37	+1	known	missense	c.560	p.N187S	0.283	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCGR2B	HGNC	ENSG00000072694				60	0	0	41	10	19.6078
OLFML2B	0	genome.wustl.edu	37	1	161969979	161969979	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	161969979	161969979	G	T	SNP	OLFML2B	ENST00000294794	human	ensembl	74_37	-1	known	silent	c.873	p.S291	1.000	NULL	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745				102	0	0	65	18	21.6867
CLCNKB	0	genome.wustl.edu	37	1	16377497	16377497	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	16377497	16377497	C	T	SNP	CLCNKB	ENST00000375679	human	ensembl	74_37	+1	known	missense	c.1181	p.P394L	0.999	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-K	-	no_errors	CLCNKB	HGNC	ENSG00000184908				98	0	0	62	17	21.519
DUSP27	0	genome.wustl.edu	37	1	167097443	167097443	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	167097443	167097443	G	A	SNP	DUSP27	ENST00000271385	human	ensembl	74_37	+1	known	silent	c.3075	p.T1025	0.105	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842				105	0	0	78	18	18.75
GPR161	0	genome.wustl.edu	37	1	168059836	168059836	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	168059836	168059836	C	T	SNP	GPR161	ENST00000537209	human	ensembl	74_37	-1	known	silent	c.1230	p.T410	0.025	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR161	HGNC	ENSG00000143147				32	0	0	20	6	23.0769
TBX19	0	genome.wustl.edu	37	1	168262443	168262443	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	168262443	168262443	C	T	SNP	TBX19	ENST00000367821	human	ensembl	74_37	+1	known	missense	c.530	p.A177V	0.938	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_Brachyury	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box,prints_TF_Brachyury	-	no_errors	TBX19	HGNC	ENSG00000143178				133	0	0	86	24	21.8182
XCL1	0	genome.wustl.edu	37	1	168550351	168550351	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	168550351	168550351	G	A	SNP	XCL1	ENST00000367818	human	ensembl	74_37	+1	known	missense	c.238	p.V80M	0.018	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_XCL1	-	no_errors	XCL1	HGNC	ENSG00000143184				102	0	0	70	23	24.7312
FMO1	0	genome.wustl.edu	37	1	171254496	171254496	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	171254496	171254496	A	G	SNP	FMO1	ENST00000354841	human	ensembl	74_37	+1	known	missense	c.1412	p.Y471C	1.000	pfam_Flavin_mOase-like,pirsf_DiMe-aniline_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_1,prints_Flavin_mOase_2	-	no_errors	FMO1	HGNC	ENSG00000010932				153	0	0	147	34	18.7845
SUCO	0	genome.wustl.edu	37	1	172520731	172520731	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	172520731	172520731	G	A	SNP	SUCO	ENST00000608151	human	ensembl	74_37	+1	known	missense	c.730	p.A244T	0.540	NULL	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUCO	HGNC	ENSG00000094975				95	0	0	50	16	24.2424
SUCO	0	genome.wustl.edu	37	1	172558904	172558904	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	172558904	172558904	A	G	SNP	SUCO	ENST00000608151	human	ensembl	74_37	+1	known	missense	c.3119	p.Y1040C	1.000	NULL	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUCO	HGNC	ENSG00000094975				274	0	0	217	45	17.1756
ATP13A2	0	genome.wustl.edu	37	1	17331318	17331318	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	17331318	17331318	T	C	SNP	ATP13A2	ENST00000326735	human	ensembl	74_37	-1	known	splice_site	c.348-2	e5-2	1.000	-	-	-	no_errors	ATP13A2	HGNC	ENSG00000159363				98	0	0	82	16	16.3265
SERPINC1	0	genome.wustl.edu	37	1	173883880	173883880	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	173883880	173883880	C	T	SNP	SERPINC1	ENST00000367698	human	ensembl	74_37	-1	known	silent	c.219	p.P73	0.001	superfamily_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINC1	HGNC	ENSG00000117601				259	0	0	209	64	23.4432
GPR52	0	genome.wustl.edu	37	1	174417662	174417662	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	174417662	174417662	A	G	SNP	GPR52	ENST00000367685	human	ensembl	74_37	+1	known	missense	c.413	p.D138G	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR52	HGNC	ENSG00000203737				425	1	0.234742	327	115	26.0181
TNN	0	genome.wustl.edu	37	1	175067522	175067522	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	175067522	175067522	C	T	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	missense	c.1910	p.T637M	0.745	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332				129	0	0	88	30	25.4237
TNN	0	genome.wustl.edu	37	1	175096130	175096130	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	175096130	175096130	C	T	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	missense	c.2954	p.T985M	0.012	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332				100	0	0	107	24	18.3206
RASAL2	0	genome.wustl.edu	37	1	178421675	178421675	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	178421675	178421675	G	A	SNP	RASAL2	ENST00000367649	human	ensembl	74_37	+1	known	missense	c.1897	p.A633T	1.000	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP	pfam_DUF3498,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,superfamily_PP1_inhibitor,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	RASAL2	HGNC	ENSG00000075391				359	0	0	315	83	20.8543
ABL2	0	genome.wustl.edu	37	1	179078139	179078139	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	179078139	179078139	G	A	SNP	ABL2	ENST00000502732	human	ensembl	74_37	-1	known	missense	c.2263	p.R755C	0.999	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_F-actin_binding,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,pfam_SH3-like_bac-type,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL2	HGNC	ENSG00000143322				99	0	0	65	20	23.5294
TOR1AIP1	0	genome.wustl.edu	37	1	179887298	179887298	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	179887298	179887298	G	A	SNP	TOR1AIP1	ENST00000528443	human	ensembl	74_37	+1	known	missense	c.1679	p.G560D	1.000	pfam_Lamina-ass_polypeptide_CLAP1C	pfam_Lamina-ass_polypeptide_CLAP1C	-	no_errors	TOR1AIP1	HGNC	ENSG00000143337				114	0	0	83	31	27.193
LHX4	0	genome.wustl.edu	37	1	180241138	180241138	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	180241138	180241138	C	T	SNP	LHX4	ENST00000263726	human	ensembl	74_37	+1	known	nonsense	c.775	p.R259*	1.000	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX4	HGNC	ENSG00000121454				45	0	0	45	10	18.1818
LAMC2	0	genome.wustl.edu	37	1	183212369	183212369	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	183212369	183212369	G	A	SNP	LAMC2	ENST00000264144	human	ensembl	74_37	+1	known	missense	c.3416	p.R1139Q	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_B_type_IV,superfamily_Growth_fac_rcpt_N_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin	-	no_errors	LAMC2	HGNC	ENSG00000058085				150	0	0	113	41	26.6234
NCF2	0	genome.wustl.edu	37	1	183538297	183538297	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	183538297	183538297	C	T	SNP	NCF2	ENST00000367535	human	ensembl	74_37	-1	known	silent	c.693	p.P231	0.998	superfamily_SH3_domain,prints_p67phox	pfam_SH3_domain,pfam_SH3_2,pfam_TPR_1,pfam_OPR_PB1,superfamily_SH3_domain,smart_TPR_repeat,smart_SH3_domain,smart_OPR_PB1,pfscan_SH3_domain,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_p67phox,prints_SH3_domain	-	no_errors	NCF2	HGNC	ENSG00000116701				314	0	0	205	65	24.0741
IGSF21	0	genome.wustl.edu	37	1	18661444	18661444	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	18661444	18661444	G	A	SNP	IGSF21	ENST00000251296	human	ensembl	74_37	+1	known	missense	c.364	p.D122N	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	IGSF21	HGNC	ENSG00000117154				55	0	0	36	13	26.5306
IGSF21	0	genome.wustl.edu	37	1	18691970	18691970	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	18691970	18691970	T	C	SNP	IGSF21	ENST00000251296	human	ensembl	74_37	+1	known	missense	c.794	p.I265T	1.000	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	IGSF21	HGNC	ENSG00000117154				212	0	0	126	35	21.7391
RGS1	0	genome.wustl.edu	37	1	192545493	192545493	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	192545493	192545493	T	C	SNP	RGS1	ENST00000367459	human	ensembl	74_37	+1	known	silent	c.216	p.D72	0.860	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS1	HGNC	ENSG00000090104				117	0	0	93	30	24.3902
EMC1	0	genome.wustl.edu	37	1	19549974	19549974	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	19549974	19549974	G	A	SNP	EMC1	ENST00000477853	human	ensembl	74_37	-1	known	silent	c.2292	p.G764	0.010	NULL	pfam_DUF1620,superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	EMC1	HGNC	ENSG00000127463				239	0	0	151	60	28.436
PTPRC	0	genome.wustl.edu	37	1	198711039	198711039	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	198711039	198711039	G	A	SNP	PTPRC	ENST00000442510	human	ensembl	74_37	+1	known	silent	c.2445	p.Q815	1.000	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC	ENSG00000081237				59	0	0	54	11	16.9231
MIR181A1	0	genome.wustl.edu	37	1	198828243	198828243	+	RNA	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	198828243	198828243	C	A	SNP	MIR181A1	ENST00000385026	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR181A1	HGNC	ENSG00000207759				262	0	0	182	51	21.8884
NAV1	0	genome.wustl.edu	37	1	201779831	201779831	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	201779831	201779831	G	A	SNP	NAV1	ENST00000367296	human	ensembl	74_37	+1	known	missense	c.4742	p.R1581H	0.998	superfamily_P-loop_NTPase,smart_AAA+_ATPase	superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	NAV1	HGNC	ENSG00000134369				54	0	0	25	7	21.875
TIMM17A	0	genome.wustl.edu	37	1	201926647	201926647	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	201926647	201926647	C	G	SNP	TIMM17A	ENST00000367287	human	ensembl	74_37	+1	known	missense	c.135	p.N45K	1.000	pfam_Tim17/Tim22/Tim23/PMP24,tigrfam_Tim17	pfam_Tim17/Tim22/Tim23/PMP24,tigrfam_Tim17	-	no_errors	TIMM17A	HGNC	ENSG00000134375				124	0	0	93	21	18.4211
KDM5B	0	genome.wustl.edu	37	1	202710666	202710666	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	202710666	202710666	T	G	SNP	KDM5B	ENST00000367264	human	ensembl	74_37	-1	known	missense	c.2882	p.Q961P	0.992	pfam_Lys_sp_deMease_like_dom	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5B	HGNC	ENSG00000117139				110	0	0	83	24	22.4299
ATP2B4	0	genome.wustl.edu	37	1	203693073	203693073	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	203693073	203693073	T	C	SNP	ATP2B4	ENST00000357681	human	ensembl	74_37	+1	known	missense	c.3089	p.L1030P	0.987	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Ca-transp_plasma	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B4	HGNC	ENSG00000058668				158	0	0	100	23	18.6992
ZC3H11A	0	genome.wustl.edu	37	1	203821512	203821512	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	203821512	203821512	A	G	SNP	ZC3H11A	ENST00000332127	human	ensembl	74_37	+1	known	silent	c.2418	p.E806	1.000	NULL	smart_Znf_CCCH	-	no_errors	ZC3H11A	HGNC	ENSG00000058673				80	0	0	48	12	20
SOX13	0	genome.wustl.edu	37	1	204091075	204091075	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	204091075	204091075	A	G	SNP	SOX13	ENST00000367204	human	ensembl	74_37	+1	known	missense	c.823	p.K275E	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX13	HGNC	ENSG00000143842				22	0	0	21	7	25
CR2	0	genome.wustl.edu	37	1	207644832	207644832	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	207644832	207644832	C	T	SNP	CR2	ENST00000367057	human	ensembl	74_37	+1	known	missense	c.1558	p.R520C	0.993	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322				224	0	0	186	55	22.8216
LAMB3	0	genome.wustl.edu	37	1	209797343	209797343	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	209797343	209797343	C	T	SNP	LAMB3	ENST00000356082	human	ensembl	74_37	-1	known	missense	c.1979	p.R660Q	0.039	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB3	HGNC	ENSG00000196878				137	0	0	72	26	26.5306
IRF6	0	genome.wustl.edu	37	1	209963054	209963054	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	209963054	209963054	C	T	SNP	IRF6	ENST00000367021	human	ensembl	74_37	-1	known	nonsense	c.1137	p.W379*	1.000	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF6	HGNC	ENSG00000117595				149	0	0	104	22	17.4603
KIF17	0	genome.wustl.edu	37	1	21042044	21042044	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	21042044	21042044	G	A	SNP	KIF17	ENST00000247986	human	ensembl	74_37	-1	known	missense	c.320	p.P107L	0.349	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF17	HGNC	ENSG00000117245				88	0	0	67	14	17.284
PPP2R5A	0	genome.wustl.edu	37	1	212532095	212532095	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	212532095	212532095	G	A	SNP	PPP2R5A	ENST00000261461	human	ensembl	74_37	+1	known	missense	c.1294	p.D432N	1.000	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5A	HGNC	ENSG00000066027				171	0	0	125	39	23.7805
MARK1	0	genome.wustl.edu	37	1	220835431	220835431	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	220835431	220835431	C	T	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.2311	p.R771C	1.000	pfam_KA1_dom,superfamily_KA1/Ssp2_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141				165	0	0	88	29	24.7863
HSPG2	0	genome.wustl.edu	37	1	22150206	22150206	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	22150206	22150206	G	A	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	silent	c.12906	p.G4302	0.984	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				78	0	0	52	20	27.7778
HHIPL2	0	genome.wustl.edu	37	1	222716949	222716949	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	222716949	222716949	C	A	SNP	HHIPL2	ENST00000343410	human	ensembl	74_37	-1	known	nonsense	c.904	p.E302*	1.000	superfamily_Quinoprot_gluc/sorb_DH	pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Quinoprot_gluc/sorb_DH,superfamily_Saposin-like	-	no_errors	HHIPL2	HGNC	ENSG00000143512				599	0	0	468	119	20.2726
FAM177B	0	genome.wustl.edu	37	1	222922880	222922880	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	222922880	222922880	C	T	SNP	FAM177B	ENST00000360827	human	ensembl	74_37	+1	known	silent	c.315	p.N105	0.007	NULL	NULL	-	no_errors	FAM177B	HGNC	ENSG00000197520				133	0	0	109	22	16.7939
H3F3A	0	genome.wustl.edu	37	1	226259158	226259158	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	226259158	226259158	G	A	SNP	H3F3A	ENST00000366813	human	ensembl	74_37	+1	known	missense	c.389	p.R130H	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	H3F3A	HGNC	ENSG00000163041				33	0	0	21	9	30
ITPKB	0	genome.wustl.edu	37	1	226924312	226924312	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	226924312	226924312	G	A	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	missense	c.848	p.P283L	0.000	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772				110	0	0	79	33	29.4643
GJC2	0	genome.wustl.edu	37	1	228345575	228345575	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	228345575	228345575	C	T	SNP	GJC2	ENST00000366714	human	ensembl	74_37	+1	known	missense	c.116	p.T39M	1.000	pfam_Connexin_N,prints_Connexin	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJC2	HGNC	ENSG00000198835				20	0	0	17	7	29.1667
OBSCN	0	genome.wustl.edu	37	1	228466411	228466411	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	228466411	228466411	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.6881	p.R2294H	1.000	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				57	0	0	36	12	25
OBSCN	0	genome.wustl.edu	37	1	228480371	228480371	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	228480371	228480371	T	C	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.10751	p.L3584P	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				157	0	0	107	48	30.9677
OBSCN	0	genome.wustl.edu	37	1	228505745	228505745	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	228505745	228505745	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.14002	p.R4668W	0.993	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				105	0	0	63	16	20.2532
OBSCN	0	genome.wustl.edu	37	1	228548354	228548354	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	228548354	228548354	C	A	SNP	OBSCN	ENST00000366709	human	ensembl	74_37	+1	known	silent	c.11118	p.T3706	0.834	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_DH-domain,pfam_Fibronectin_type3,pfam_IQ_motif_EF-hand-BS,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				26	0	0	28	10	26.3158
NUP133	0	genome.wustl.edu	37	1	229606455	229606455	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	229606455	229606455	C	T	SNP	NUP133	ENST00000261396	human	ensembl	74_37	-1	known	missense	c.1948	p.A650T	0.992	pfam_Nucleoporin_Nup133/Nup155_C	pfam_Nucleoporin_Nup133/Nup155_C,pfam_Nucleoporin_Nup133/Nup155_N	-	no_errors	NUP133	HGNC	ENSG00000069248				86	0	0	80	19	19.1919
MORN1	0	genome.wustl.edu	37	1	2318864	2318864	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	2318864	2318864	G	A	SNP	MORN1	ENST00000378531	human	ensembl	74_37	-1	known	missense	c.352	p.R118W	0.305	pfam_MORN,smart_MORN	pfam_MORN,smart_MORN	-	no_errors	MORN1	HGNC	ENSG00000116151				143	0	0	116	14	10.7692
SIPA1L2	0	genome.wustl.edu	37	1	232650507	232650507	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	232650507	232650507	T	C	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	silent	c.579	p.G193	0.968	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				246	0	0	187	58	23.6735
KCNK1	0	genome.wustl.edu	37	1	233802452	233802452	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	233802452	233802452	T	C	SNP	KCNK1	ENST00000366621	human	ensembl	74_37	+1	known	missense	c.467	p.I156T	1.000	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TWIK1	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TWIK1,prints_2pore_dom_K_chnl_TWIK,prints_2pore_dom_K_chnl	-	no_errors	KCNK1	HGNC	ENSG00000135750				75	0	0	39	14	26.4151
NID1	0	genome.wustl.edu	37	1	236189283	236189283	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	236189283	236189283	G	T	SNP	NID1	ENST00000264187	human	ensembl	74_37	-1	known	missense	c.1897	p.L633I	1.000	superfamily_GFP,smart_G2_nidogen/fibulin_G2F,pfscan_G2_nidogen/fibulin_G2F	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd_dom,superfamily_GFP,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_G2_nidogen/fibulin_G2F,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID1	HGNC	ENSG00000116962				274	0	0	210	51	19.5402
GPR137B	0	genome.wustl.edu	37	1	236371377	236371377	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	236371377	236371377	A	G	SNP	GPR137B	ENST00000366592	human	ensembl	74_37	+1	known	silent	c.1119	p.G373	0.998	NULL	NULL	-	no_errors	GPR137B	HGNC	ENSG00000077585				119	0	0	95	18	15.9292
HEATR1	0	genome.wustl.edu	37	1	236719118	236719118	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	236719118	236719118	G	A	SNP	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	missense	c.5636	p.A1879V	1.000	pfam_BP28_C_dom,superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285				265	0	0	182	72	28.3465
HEATR1	0	genome.wustl.edu	37	1	236721561	236721561	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	236721561	236721561	G	A	SNP	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	missense	c.5180	p.A1727V	1.000	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285				140	0	0	113	31	21.5278
ACTN2	0	genome.wustl.edu	37	1	236925802	236925802	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	236925802	236925802	G	A	SNP	ACTN2	ENST00000366578	human	ensembl	74_37	+1	known	silent	c.2568	p.P856	0.035	pfam_EF-hand_Ca_insen	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN2	HGNC	ENSG00000077522				98	0	0	72	17	19.1011
FMN2	0	genome.wustl.edu	37	1	240255930	240255930	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	240255930	240255930	G	T	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.521	p.R174M	1.000	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				62	0	0	31	5	13.8889
FMN2	0	genome.wustl.edu	37	1	240370992	240370992	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	240370992	240370992	C	T	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	silent	c.2880	p.P960	0.001	pfam_Formin_homology_1,smart_FH2_Formin	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				29	0	0	32	6	15.7895
CEP170	0	genome.wustl.edu	37	1	243289821	243289821	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	243289821	243289821	G	A	SNP	CEP170	ENST00000366542	human	ensembl	74_37	-1	known	missense	c.4685	p.A1562V	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_Fibronectin_type3,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170	HGNC	ENSG00000143702				36	0	0	18	7	28
PANK4	0	genome.wustl.edu	37	1	2440356	2440356	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	2440356	2440356	G	A	SNP	PANK4	ENST00000378466	human	ensembl	74_37	-1	known	missense	c.2252	p.A751V	1.000	pfam_DUF89,superfamily_DUF89,pirsf_PanK_long	pfam_Type_II_PanK,pfam_DUF89,superfamily_DUF89,pirsf_PanK_long,tigrfam_Type_II_PanK	-	no_errors	PANK4	HGNC	ENSG00000157881				19	0	0	12	5	29.4118
KIF26B	0	genome.wustl.edu	37	1	245849899	245849899	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	245849899	245849899	G	A	SNP	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	missense	c.3614	p.G1205D	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849				16	0	0	16	7	30.4348
TFB2M	0	genome.wustl.edu	37	1	246729434	246729434	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	246729434	246729434	T	A	SNP	TFB2M	ENST00000366514	human	ensembl	74_37	-1	known	missense	c.7	p.I3F	0.461	pirsf_Mt_di-Me-Ado_Trfase_2_prcur	pfam_rRNA_Ade_methylase_transferase,smart_rRNA_Ade_methylase_Trfase_N,pirsf_Mt_di-Me-Ado_Trfase_2_prcur	-	no_errors	TFB2M	HGNC	ENSG00000162851				48	0	0	39	10	20.4082
CNST	0	genome.wustl.edu	37	1	246823624	246823624	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	246823624	246823624	A	G	SNP	CNST	ENST00000366513	human	ensembl	74_37	+1	known	missense	c.1960	p.S654G	0.010	NULL	NULL	-	no_errors	CNST	HGNC	ENSG00000162852				175	0	0	129	50	27.933
OR6F1	0	genome.wustl.edu	37	1	247875954	247875954	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	247875954	247875954	T	C	SNP	OR6F1	ENST00000302084	human	ensembl	74_37	-1	known	missense	c.104	p.Y35C	0.814	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6F1	HGNC	ENSG00000169214				209	0	0	147	46	23.8342
SMPDL3B	0	genome.wustl.edu	37	1	28285220	28285220	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	28285220	28285220	C	T	SNP	SMPDL3B	ENST00000373894	human	ensembl	74_37	+1	known	silent	c.1239	p.H413	0.817	pirsf_ASM-like_Pdiesterase_prd	pfam_PEstase_dom,pirsf_ASM-like_Pdiesterase_prd	-	no_errors	SMPDL3B	HGNC	ENSG00000130768				149	0	0	107	26	19.5489
ACTRT2	0	genome.wustl.edu	37	1	2939367	2939367	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	2939367	2939367	C	A	SNP	ACTRT2	ENST00000378404	human	ensembl	74_37	+1	known	missense	c.1117	p.Q373K	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT2	HGNC	ENSG00000169717				209	0	0	143	35	19.6629
MATN1	0	genome.wustl.edu	37	1	31187163	31187163	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	31187163	31187163	A	G	SNP	MATN1	ENST00000373765	human	ensembl	74_37	-1	known	missense	c.1372	p.C458R	0.998	pfam_Matrilin_coiled-coil_trimer	pfam_VWF_A,pfam_Matrilin_coiled-coil_trimer,pfam_EGF-like_Ca-bd_dom,smart_VWF_A,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_VWF_A	-	no_errors	MATN1	HGNC	ENSG00000162510				17	0	0	13	3	18.75
BSDC1	0	genome.wustl.edu	37	1	32834083	32834083	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	32834083	32834083	G	A	SNP	BSDC1	ENST00000341071	human	ensembl	74_37	-1	known	nonsense	c.1276	p.Q426*	1.000	NULL	pfam_BSD,smart_BSD,pfscan_BSD	-	no_errors	BSDC1	HGNC	ENSG00000160058				87	0	0	62	21	25.3012
S100PBP	0	genome.wustl.edu	37	1	33292032	33292032	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	33292032	33292032	C	A	SNP	S100PBP	ENST00000373475	human	ensembl	74_37	+1	known	missense	c.332	p.P111H	0.915	NULL	NULL	-	no_errors	S100PBP	HGNC	ENSG00000116497				121	0	0	94	36	27.6923
MEGF6	0	genome.wustl.edu	37	1	3410383	3410383	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	3410383	3410383	C	T	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	missense	c.4339	p.G1447S	0.997	smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591				22	0	0	15	4	21.0526
MEGF6	0	genome.wustl.edu	37	1	3417655	3417655	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	3417655	3417655	C	T	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	missense	c.2450	p.C817Y	1.000	smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591				69	0	0	45	11	19.6429
MEGF6	0	genome.wustl.edu	37	1	3421847	3421847	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	3421847	3421847	C	T	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	missense	c.2113	p.V705M	0.998	smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591				32	0	0	33	7	17.5
THRAP3	0	genome.wustl.edu	37	1	36755130	36755130	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	36755130	36755130	C	T	SNP	THRAP3	ENST00000354618	human	ensembl	74_37	+1	known	missense	c.1510	p.R504W	0.999	NULL	NULL	-	no_errors	THRAP3	HGNC	ENSG00000054118				179	0	0	130	36	21.6867
OSCP1	0	genome.wustl.edu	37	1	36883724	36883724	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	36883724	36883724	C	T	SNP	OSCP1	ENST00000471369	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OSCP1	HGNC	ENSG00000116885				46	0	0	36	6	14.2857
SF3A3	0	genome.wustl.edu	37	1	38444662	38444662	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	38444662	38444662	G	A	SNP	SF3A3	ENST00000373019	human	ensembl	74_37	-1	known	silent	c.825	p.G275	0.976	NULL	pfam_DUF3449,pfam_SF3a60_bindingd,pfscan_Znf_C2H2_matrin	-	no_errors	SF3A3	HGNC	ENSG00000183431				110	0	0	76	21	21.6495
MACF1	0	genome.wustl.edu	37	1	39751055	39751055	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	39751055	39751055	T	C	SNP	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	missense	c.1361	p.L454P	1.000	NULL	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603				93	0	0	80	24	23.0769
MACF1	0	genome.wustl.edu	37	1	39758498	39758498	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	39758498	39758498	C	T	SNP	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	nonsense	c.1990	p.Q664*	1.000	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603				64	0	0	51	12	19.0476
BMP8B	0	genome.wustl.edu	37	1	40230521	40230521	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	40230521	40230521	G	A	SNP	BMP8B	ENST00000397360	human	ensembl	74_37	-1	known	missense	c.833	p.P278L	0.000	NULL	pfam_TGF-b_N	-	no_errors	BMP8B	HGNC	ENSG00000116985				58	0	0	54	12	18.1818
HIVEP3	0	genome.wustl.edu	37	1	42049096	42049096	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	42049096	42049096	C	T	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.1373	p.R458Q	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				94	0	0	53	14	20.8955
CLDN19	0	genome.wustl.edu	37	1	43205659	43205659	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	43205659	43205659	C	T	SNP	CLDN19	ENST00000296387	human	ensembl	74_37	-1	known	missense	c.76	p.A26T	0.994	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	-	no_errors	CLDN19	HGNC	ENSG00000164007				15	0	0	2	3	60
WDR65	0	genome.wustl.edu	37	1	43675514	43675514	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	43675514	43675514	G	A	SNP	WDR65	ENST00000528956	human	ensembl	74_37	+1	known	missense	c.1856	p.R619H	1.000	superfamily_Quinonprotein_ADH-like_supfam	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR65	HGNC	ENSG00000243710				148	0	0	108	34	23.9437
CDC20	0	genome.wustl.edu	37	1	43828733	43828733	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	43828733	43828733	C	T	SNP	CDC20	ENST00000310955	human	ensembl	74_37	+1	known	missense	c.1433	p.A478V	0.604	pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CDC20	HGNC	ENSG00000117399				109	0	0	78	28	26.4151
HPDL	0	genome.wustl.edu	37	1	45793679	45793679	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	45793679	45793679	T	C	SNP	HPDL	ENST00000334815	human	ensembl	74_37	+1	known	missense	c.859	p.Y287H	0.998	pirsf_4OHPhenylPyrv_dOase	pirsf_4OHPhenylPyrv_dOase	-	no_errors	HPDL	HGNC	ENSG00000186603				102	0	0	79	21	21
IPP	0	genome.wustl.edu	37	1	46193312	46193312	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	46193312	46193312	C	T	SNP	IPP	ENST00000396478	human	ensembl	74_37	-1	known	missense	c.1039	p.A347T	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	IPP	HGNC	ENSG00000197429				204	0	0	162	44	21.3592
MAST2	0	genome.wustl.edu	37	1	46500323	46500323	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	46500323	46500323	C	T	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	missense	c.3982	p.R1328C	1.000	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015				102	0	0	75	23	23.4694
ORC1	0	genome.wustl.edu	37	1	52859407	52859407	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	52859407	52859407	G	A	SNP	ORC1	ENST00000371566	human	ensembl	74_37	-1	known	missense	c.790	p.R264W	0.290	NULL	pfam_BAH_dom,pfam_ATPase_AAA_core,pfam_Cdc6_C_dom,pfam_DUF2075,superfamily_P-loop_NTPase,smart_BAH_dom,smart_AAA+_ATPase,pfscan_BAH_dom	-	no_errors	ORC1	HGNC	ENSG00000085840				113	0	0	95	24	20.1681
C1orf87	0	genome.wustl.edu	37	1	60491079	60491079	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	60491079	60491079	T	C	SNP	C1orf87	ENST00000371201	human	ensembl	74_37	-1	known	missense	c.1121	p.E374G	1.000	NULL	NULL	-	no_errors	C1orf87	HGNC	ENSG00000162598				166	0	0	99	29	22.6562
L1TD1	0	genome.wustl.edu	37	1	62676034	62676034	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	62676034	62676034	C	T	SNP	L1TD1	ENST00000498273	human	ensembl	74_37	+1	known	missense	c.1588	p.H530Y	0.000	pfam_Transposase_22	pfam_Transposase_22,superfamily_STAT_TF_coiled-coil	-	no_errors	L1TD1	HGNC	ENSG00000240563				82	0	0	64	14	17.9487
PLEKHG5	0	genome.wustl.edu	37	1	6530390	6530390	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	6530390	6530390	T	C	SNP	PLEKHG5	ENST00000537245	human	ensembl	74_37	-1	known	missense	c.1943	p.D648G	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG5	HGNC	ENSG00000171680				61	0	0	36	19	34.5455
LEPR	0	genome.wustl.edu	37	1	66085623	66085623	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	66085623	66085623	C	A	SNP	LEPR	ENST00000349533	human	ensembl	74_37	+1	known	missense	c.2408	p.P803H	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_IgC2-like_lig-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LEPR	HGNC	ENSG00000116678				148	0	0	97	21	17.7966
WLS	0	genome.wustl.edu	37	1	68603590	68603590	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	68603590	68603590	G	A	SNP	WLS	ENST00000540432	human	ensembl	74_37	-1	known	silent	c.1389	p.G463	0.026	NULL	NULL	-	no_errors	WLS	HGNC	ENSG00000116729				125	0	0	85	41	32.5397
LRRC7	0	genome.wustl.edu	37	1	70493956	70493956	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	70493956	70493956	C	T	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	missense	c.1783	p.R595C	1.000	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122				124	0	0	70	23	24.7312
LRRIQ3	0	genome.wustl.edu	37	1	74649222	74649222	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	74649222	74649222	G	A	SNP	LRRIQ3	ENST00000354431	human	ensembl	74_37	-1	known	silent	c.147	p.C49	0.998	NULL	pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ3	HGNC	ENSG00000162620				128	0	0	117	10	7.87402
AK5	0	genome.wustl.edu	37	1	77752792	77752792	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	77752792	77752792	G	A	SNP	AK5	ENST00000354567	human	ensembl	74_37	+1	known	missense	c.227	p.R76Q	1.000	NULL	pfam_Adenylate_kin,pfam_Dpy-30_motif,superfamily_P-loop_NTPase,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,prints_Adenylate_kin,tigrfam_Adenylate_kin1	-	no_errors	AK5	HGNC	ENSG00000154027				109	0	0	97	29	23.0159
NEXN	0	genome.wustl.edu	37	1	78383873	78383873	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	78383873	78383873	C	T	SNP	NEXN	ENST00000334785	human	ensembl	74_37	+1	known	missense	c.362	p.T121M	0.854	NULL	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	NEXN	HGNC	ENSG00000162614				125	0	0	119	32	21.1921
SLC45A1	0	genome.wustl.edu	37	1	8390770	8390770	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	8390770	8390770	G	A	SNP	SLC45A1	ENST00000377479	human	ensembl	74_37	+1	known	missense	c.1319	p.R440Q	0.992	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A1	HGNC	ENSG00000162426				49	0	0	30	18	37.5
SSX2IP	0	genome.wustl.edu	37	1	85136475	85136475	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	85136475	85136475	T	C	SNP	SSX2IP	ENST00000342203	human	ensembl	74_37	-1	known	missense	c.67	p.T23A	1.000	NULL	pfam_Afadin/alpha-actinin-bd	-	no_errors	SSX2IP	HGNC	ENSG00000117155				349	0	0	290	65	18.3099
MCOLN2	0	genome.wustl.edu	37	1	85431290	85431290	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	85431290	85431290	C	T	SNP	MCOLN2	ENST00000370608	human	ensembl	74_37	-1	known	missense	c.179	p.R60H	0.575	NULL	pfam_PKD1_2_channel	-	no_errors	MCOLN2	HGNC	ENSG00000153898				138	0	0	104	20	16.129
COL24A1	0	genome.wustl.edu	37	1	86249817	86249817	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	86249817	86249817	G	T	SNP	COL24A1	ENST00000370571	human	ensembl	74_37	-1	known	missense	c.4200	p.F1400L	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL24A1	HGNC	ENSG00000171502				167	0	0	118	36	23.3766
RERE	0	genome.wustl.edu	37	1	8684392	8684392	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	8684392	8684392	A	G	SNP	RERE	ENST00000337907	human	ensembl	74_37	-1	known	missense	c.373	p.C125R	1.000	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599				246	0	0	183	39	17.5676
CLCA4	0	genome.wustl.edu	37	1	87029383	87029383	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	87029383	87029383	G	C	SNP	CLCA4	ENST00000370563	human	ensembl	74_37	+1	known	missense	c.488	p.G163A	1.000	pfam_Cl_channel_Ca,tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,superfamily_Fibronectin_type3,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA4	HGNC	ENSG00000016602				90	0	0	90	24	21.0526
NOC2L	0	genome.wustl.edu	37	1	886561	886561	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	886561	886561	C	T	SNP	NOC2L	ENST00000327044	human	ensembl	74_37	-1	known	silent	c.1389	p.T463	0.206	pfam_Noc2,superfamily_ARM-type_fold	pfam_Noc2,superfamily_ARM-type_fold	-	no_errors	NOC2L	HGNC	ENSG00000188976				12	0	0	9	3	25
LRRC8B	0	genome.wustl.edu	37	1	90048284	90048284	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	90048284	90048284	C	T	SNP	LRRC8B	ENST00000330947	human	ensembl	74_37	+1	known	silent	c.75	p.D25	0.959	pfam_LRR_protein-8_N	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8B	HGNC	ENSG00000197147				325	0	0	243	49	16.7808
ZNF326	0	genome.wustl.edu	37	1	90473107	90473107	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	90473107	90473107	G	A	SNP	ZNF326	ENST00000340281	human	ensembl	74_37	+1	known	missense	c.413	p.R138H	1.000	NULL	pfam_AKAP95	-	no_errors	ZNF326	HGNC	ENSG00000162664				187	0	0	162	45	21.7391
HFM1	0	genome.wustl.edu	37	1	91781412	91781412	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	91781412	91781412	C	T	SNP	HFM1	ENST00000370425	human	ensembl	74_37	-1	known	missense	c.3100	p.G1034S	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HFM1	HGNC	ENSG00000162669				126	0	0	97	27	21.7742
HFM1	0	genome.wustl.edu	37	1	91843716	91843716	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	91843716	91843716	G	A	SNP	HFM1	ENST00000370425	human	ensembl	74_37	-1	known	missense	c.1261	p.R421C	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HFM1	HGNC	ENSG00000162669				130	0	0	90	30	25
BRDT	0	genome.wustl.edu	37	1	92443769	92443769	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	92443769	92443769	G	A	SNP	BRDT	ENST00000362005	human	ensembl	74_37	+1	known	silent	c.1014	p.A338	0.988	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRDT	HGNC	ENSG00000137948				142	1	0.699301	110	32	22.5352
BTBD8	0	genome.wustl.edu	37	1	92595319	92595319	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	92595319	92595319	C	T	SNP	BTBD8	ENST00000342818	human	ensembl	74_37	+1	known	silent	c.738	p.Y246	0.002	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	BTBD8	HGNC	ENSG00000189195				127	1	0.78125	94	24	20.339
ABCA4	0	genome.wustl.edu	37	1	94495142	94495142	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	94495142	94495142	C	T	SNP	ABCA4	ENST00000370225	human	ensembl	74_37	-1	known	silent	c.4398	p.V1466	0.996	tigrfam_Rim_ABC_transpt	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Rim_ABC_transpt	-	no_errors	ABCA4	HGNC	ENSG00000198691				53	0	0	40	6	13.0435
C1orf200	0	genome.wustl.edu	37	1	9714277	9714277	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	9714277	9714277	G	A	SNP	C1orf200	ENST00000377320	human	ensembl	74_37	-1	known	missense	c.218	p.A73V	0.001	NULL	NULL	-	no_errors	C1orf200	HGNC	ENSG00000179840				49	0	0	29	3	9.375
PIK3CD	0	genome.wustl.edu	37	1	9784903	9784903	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	9784903	9784903	G	A	SNP	PIK3CD	ENST00000536656	human	ensembl	74_37	+1	known	missense	c.2978	p.R993H	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CD	HGNC	ENSG00000171608				111	0	0	99	23	18.8525
SLC25A28	0	genome.wustl.edu	37	10	101370949	101370949	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	101370949	101370949	T	G	SNP	SLC25A28	ENST00000370495	human	ensembl	74_37	-1	known	missense	c.752	p.E251A	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A28	HGNC	ENSG00000155287				133	0	0	106	29	21.4815
ENTPD7	0	genome.wustl.edu	37	10	101455831	101455831	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	101455831	101455831	G	A	SNP	ENTPD7	ENST00000370489	human	ensembl	74_37	+1	known	missense	c.962	p.R321Q	1.000	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD7	HGNC	ENSG00000198018				169	0	0	115	38	24.8366
PKD2L1	0	genome.wustl.edu	37	10	102054754	102054754	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	102054754	102054754	C	T	SNP	PKD2L1	ENST00000318222	human	ensembl	74_37	-1	known	missense	c.1483	p.G495S	1.000	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2,prints_PKD_1	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2,prints_PKD_1	-	no_errors	PKD2L1	HGNC	ENSG00000107593				101	1	0.980392	64	29	31.1828
GBF1	0	genome.wustl.edu	37	10	104128078	104128078	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	104128078	104128078	C	T	SNP	GBF1	ENST00000369983	human	ensembl	74_37	+1	known	silent	c.2743	p.L915	1.000	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	GBF1	HGNC	ENSG00000107862				197	0	0	133	41	23.5632
ITPRIP	0	genome.wustl.edu	37	10	106074825	106074825	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	106074825	106074825	C	T	SNP	ITPRIP	ENST00000278071	human	ensembl	74_37	-1	known	missense	c.985	p.D329N	1.000	NULL	NULL	-	no_errors	ITPRIP	HGNC	ENSG00000148841				175	0	0	121	25	17.1233
SORCS1	0	genome.wustl.edu	37	10	108448006	108448006	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	108448006	108448006	G	A	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.1504	p.R502C	0.997	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018				183	0	0	135	28	17.1779
WDR37	0	genome.wustl.edu	37	10	1126020	1126020	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	1126020	1126020	T	C	SNP	WDR37	ENST00000263150	human	ensembl	74_37	+1	known	missense	c.305	p.L102P	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR37	HGNC	ENSG00000047056				64	0	0	58	10	14.7059
TCF7L2	0	genome.wustl.edu	37	10	114911564	114911564	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	114911564	114911564	T	G	SNP	TCF7L2	ENST00000355995	human	ensembl	74_37	+1	known	missense	c.1082	p.M361R	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7L2	HGNC	ENSG00000148737				83	0	0	85	27	24.1071
FAM160B1	0	genome.wustl.edu	37	10	116602749	116602749	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	116602749	116602749	T	C	SNP	FAM160B1	ENST00000369248	human	ensembl	74_37	+1	known	silent	c.580	p.L194	0.004	pfam_RetinoicA-induced_16-like	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160B1	HGNC	ENSG00000151553				115	0	0	102	14	12.069
FAM160B1	0	genome.wustl.edu	37	10	116606441	116606441	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	116606441	116606441	C	T	SNP	FAM160B1	ENST00000369248	human	ensembl	74_37	+1	known	missense	c.1522	p.P508S	1.000	NULL	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160B1	HGNC	ENSG00000151553				152	0	0	105	19	15.3226
HSPA12A	0	genome.wustl.edu	37	10	118441370	118441370	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	118441370	118441370	C	T	SNP	HSPA12A	ENST00000369209	human	ensembl	74_37	-1	known	missense	c.854	p.R285H	1.000	NULL	NULL	-	no_errors	HSPA12A	HGNC	ENSG00000165868				77	0	0	76	25	24.7525
PDZD8	0	genome.wustl.edu	37	10	119042787	119042787	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	119042787	119042787	A	G	SNP	PDZD8	ENST00000334464	human	ensembl	74_37	-1	known	missense	c.3457	p.S1153P	1.000	NULL	pfam_PDZ,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_PDZ,smart_PDZ,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_PDZ,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PDZD8	HGNC	ENSG00000165650				180	0	0	119	40	25.1572
PRLHR	0	genome.wustl.edu	37	10	120354444	120354444	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	120354444	120354444	A	G	SNP	PRLHR	ENST00000239032	human	ensembl	74_37	-1	known	missense	c.313	p.S105P	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prolrel_pep_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	PRLHR	HGNC	ENSG00000119973				56	0	0	62	6	8.82353
INPP5F	0	genome.wustl.edu	37	10	121586928	121586928	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	121586928	121586928	C	T	SNP	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	missense	c.3035	p.S1012L	0.999	NULL	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825				260	0	0	161	35	17.8571
DHTKD1	0	genome.wustl.edu	37	10	12162823	12162823	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	12162823	12162823	C	A	SNP	DHTKD1	ENST00000263035	human	ensembl	74_37	+1	known	missense	c.2696	p.A899D	1.000	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_Transketolase-like_Pyr-bd,pfam_DH_E1,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	DHTKD1	HGNC	ENSG00000181192				77	0	0	49	14	22.2222
FGFR2	0	genome.wustl.edu	37	10	123353418	123353418	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	123353418	123353418	C	T	SNP	FGFR2	ENST00000490349	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	FGFR2	HGNC	ENSG00000066468				28	0	0	18	10	35.7143
DMBT1	0	genome.wustl.edu	37	10	124331836	124331836	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	124331836	124331836	C	T	SNP	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	missense	c.194	p.P65L	0.000	NULL	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908				214	0	0	167	64	27.7056
ADAM12	0	genome.wustl.edu	37	10	127730759	127730759	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	127730759	127730759	C	A	SNP	ADAM12	ENST00000368676	human	ensembl	74_37	-1	known	missense	c.2159	p.G720V	0.000	NULL	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,prints_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM12	HGNC	ENSG00000148848				87	0	0	62	9	12.6761
DOCK1	0	genome.wustl.edu	37	10	129160405	129160405	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	129160405	129160405	C	T	SNP	DOCK1	ENST00000280333	human	ensembl	74_37	+1	known	missense	c.3298	p.R1100C	0.986	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c-like_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK1	HGNC	ENSG00000150760				47	0	0	38	7	15.5556
MCM10	0	genome.wustl.edu	37	10	13240764	13240764	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	13240764	13240764	A	G	SNP	MCM10	ENST00000484800	human	ensembl	74_37	+1	known	missense	c.2198	p.K733R	1.000	pfam_Rep_factor_Mcm10	pfam_Rep_factor_Mcm10,pfam_Znf_Mcm10/DnaG	-	no_errors	MCM10	HGNC	ENSG00000065328				72	0	0	59	20	25.3165
PPP2R2D	0	genome.wustl.edu	37	10	133769302	133769302	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	133769302	133769302	A	C	SNP	PPP2R2D	ENST00000455566	human	ensembl	74_37	+1	known	missense	c.1104	p.K368N	0.992	superfamily_WD40_repeat_dom,pirsf_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2D	HGNC	ENSG00000175470				64	0	0	57	19	25
BEND7	0	genome.wustl.edu	37	10	13523008	13523008	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	13523008	13523008	C	T	SNP	BEND7	ENST00000396900	human	ensembl	74_37	-1	known	silent	c.954	p.A318	0.570	pfam_BEN_domain	pfam_BEN_domain	-	no_errors	BEND7	HGNC	ENSG00000165626				268	0	0	193	56	22.49
FAM107B	0	genome.wustl.edu	37	10	14816491	14816491	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	14816491	14816491	C	T	SNP	FAM107B	ENST00000181796	human	ensembl	74_37	-1	known	missense	c.172	p.A58T	0.953	NULL	pfam_DUF1151	-	no_errors	FAM107B	HGNC	ENSG00000065809				157	0	0	119	32	21.1921
CUBN	0	genome.wustl.edu	37	10	16992003	16992003	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	16992003	16992003	G	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	nonsense	c.5077	p.R1693*	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				49	0	0	32	9	21.9512
CUBN	0	genome.wustl.edu	37	10	17026127	17026127	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	17026127	17026127	G	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.4502	p.A1501V	0.801	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				245	0	0	183	52	22.1277
CUBN	0	genome.wustl.edu	37	10	17152969	17152969	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	17152969	17152969	C	T	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.964	p.V322I	0.996	pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				95	0	0	72	29	28.7129
GPR158	0	genome.wustl.edu	37	10	25701295	25701295	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	25701295	25701295	G	A	SNP	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	missense	c.1228	p.V410I	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025				348	0	0	245	83	25.3049
GPR158	0	genome.wustl.edu	37	10	25887671	25887671	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	25887671	25887671	A	C	SNP	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	missense	c.3116	p.N1039T	0.873	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025				163	1	0.609756	104	39	27.2727
ACBD5	0	genome.wustl.edu	37	10	27512289	27512289	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	27512289	27512289	G	A	SNP	ACBD5	ENST00000375888	human	ensembl	74_37	-1	known	silent	c.462	p.G154	0.990	pirsf_M-assoc_diazepam-bd-inh	pfam_Acyl-CoA-binding_protein,superfamily_Acyl-CoA-binding_protein,pirsf_M-assoc_diazepam-bd-inh,prints_Acyl-CoA-binding_protein	-	no_errors	ACBD5	HGNC	ENSG00000107897				150	0	0	109	24	18.0451
ARMC4P1	0	genome.wustl.edu	37	10	27551918	27551918	+	RNA	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	27551918	27551918	G	T	SNP	ARMC4P1	ENST00000576034	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARMC4P1	HGNC	ENSG00000238021				35	0	0	28	11	28.2051
MKX	0	genome.wustl.edu	37	10	28030368	28030368	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	28030368	28030368	A	G	SNP	MKX	ENST00000375790	human	ensembl	74_37	-1	known	missense	c.254	p.L85P	1.000	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	MKX	HGNC	ENSG00000150051				114	1	0.869565	89	18	16.8224
MKX	0	genome.wustl.edu	37	10	28030415	28030415	+	Silent	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	28030415	28030415	C	G	SNP	MKX	ENST00000375790	human	ensembl	74_37	-1	known	silent	c.207	p.G69	0.959	superfamily_Homeodomain-like,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	MKX	HGNC	ENSG00000150051				86	0	0	67	16	19.2771
SVIL	0	genome.wustl.edu	37	10	29777554	29777554	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	29777554	29777554	T	C	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.4324	p.R1442G	1.000	smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				37	0	0	28	9	24.3243
SVIL	0	genome.wustl.edu	37	10	29788162	29788162	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	29788162	29788162	T	C	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.3547	p.T1183A	1.000	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				117	0	0	95	17	15.1786
KIAA1462	0	genome.wustl.edu	37	10	30336508	30336508	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	30336508	30336508	G	A	SNP	KIAA1462	ENST00000375377	human	ensembl	74_37	-1	known	silent	c.234	p.G78	0.024	NULL	NULL	-	no_errors	KIAA1462	HGNC	ENSG00000165757				78	0	0	85	23	21.2963
ZNF33A	0	genome.wustl.edu	37	10	38345312	38345312	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	38345312	38345312	T	C	SNP	ZNF33A	ENST00000432900	human	ensembl	74_37	+1	known	missense	c.2278	p.C760R	0.974	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33A	HGNC	ENSG00000189180				183	0	0	148	43	22.5131
RBP3	0	genome.wustl.edu	37	10	48389993	48389993	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	48389993	48389993	C	T	SNP	RBP3	ENST00000224600	human	ensembl	74_37	-1	known	silent	c.885	p.T295	0.035	pfam_Interphotoreceptor_retinol-bd,smart_Interphotoreceptor_retinol-bd	pfam_Interphotoreceptor_retinol-bd,pfam_Interphotorcpt_retinol-bd_N,smart_Interphotoreceptor_retinol-bd	-	no_errors	RBP3	HGNC	ENSG00000107618				51	0	0	26	13	33.3333
DKK1	0	genome.wustl.edu	37	10	54074424	54074424	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	54074424	54074424	T	C	SNP	DKK1	ENST00000373970	human	ensembl	74_37	+1	known	missense	c.230	p.I77T	0.022	NULL	pfam_Dickkopf_N	-	no_errors	DKK1	HGNC	ENSG00000107984				72	0	0	63	23	26.7442
NET1	0	genome.wustl.edu	37	10	5493800	5493800	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	5493800	5493800	G	T	SNP	NET1	ENST00000355029	human	ensembl	74_37	+1	known	missense	c.263	p.S88I	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	NET1	HGNC	ENSG00000173848				331	0	0	249	61	19.6774
NET1	0	genome.wustl.edu	37	10	5494448	5494448	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	5494448	5494448	T	C	SNP	NET1	ENST00000355029	human	ensembl	74_37	+1	known	missense	c.491	p.M164T	0.998	superfamily_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	NET1	HGNC	ENSG00000173848				66	0	0	38	16	29.6296
PCDH15	0	genome.wustl.edu	37	10	55912943	55912943	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	55912943	55912943	G	A	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	silent	c.1701	p.I567	0.991	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				133	0	0	86	31	26.4957
FAM208B	0	genome.wustl.edu	37	10	5791573	5791573	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	5791573	5791573	G	A	SNP	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	silent	c.6189	p.L2063	0.000	NULL	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021				198	0	0	147	39	20.9677
ANK3	0	genome.wustl.edu	37	10	61846456	61846456	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	61846456	61846456	G	A	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.3727	p.R1243C	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				129	0	0	90	37	29.1339
EGR2	0	genome.wustl.edu	37	10	64573060	64573060	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	64573060	64573060	G	A	SNP	EGR2	ENST00000242480	human	ensembl	74_37	-1	known	silent	c.1338	p.G446	0.480	NULL	pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR2	HGNC	ENSG00000122877				100	0	0	79	21	21
HKDC1	0	genome.wustl.edu	37	10	71010120	71010120	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	71010120	71010120	C	T	SNP	HKDC1	ENST00000354624	human	ensembl	74_37	+1	known	missense	c.1645	p.R549W	0.624	pfam_Hexokinase_N	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HKDC1	HGNC	ENSG00000156510				222	0	0	168	56	25
ADAMTS14	0	genome.wustl.edu	37	10	72462119	72462119	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	72462119	72462119	C	T	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	missense	c.574	p.R192W	0.972	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316				128	1	0.775194	71	30	29.703
SGPL1	0	genome.wustl.edu	37	10	72633180	72633180	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	72633180	72633180	G	A	SNP	SGPL1	ENST00000373202	human	ensembl	74_37	+1	known	missense	c.1132	p.V378I	0.986	pfam_PyrdxlP-dep_de-COase,pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,pfam_Aminotrans_V/Cys_dSase,pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	SGPL1	HGNC	ENSG00000166224				299	0	0	194	61	23.9216
CDH23	0	genome.wustl.edu	37	10	73375330	73375330	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	73375330	73375330	G	A	SNP	CDH23	ENST00000461841	human	ensembl	74_37	+1	known	missense	c.1037	p.R346Q	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				52	0	0	50	10	16.6667
MYOZ1	0	genome.wustl.edu	37	10	75394429	75394429	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	75394429	75394429	G	T	SNP	MYOZ1	ENST00000359322	human	ensembl	74_37	-1	known	missense	c.315	p.F105L	0.999	pfam_Calsarcin-bd	pfam_Calsarcin-bd	-	no_errors	MYOZ1	HGNC	ENSG00000177791				106	0	0	87	25	22.3214
DUPD1	0	genome.wustl.edu	37	10	76803726	76803726	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	76803726	76803726	C	T	SNP	DUPD1	ENST00000338487	human	ensembl	74_37	-1	known	missense	c.250	p.V84M	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP_famA,prints_Atypical_DUSP	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP_famA,prints_Atypical_DUSP	-	no_errors	DUPD1	HGNC	ENSG00000188716				59	0	0	36	12	25
ITIH2	0	genome.wustl.edu	37	10	7759669	7759669	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	7759669	7759669	A	G	SNP	ITIH2	ENST00000358415	human	ensembl	74_37	+1	known	missense	c.548	p.Y183C	1.000	pfam_VIT,smart_VIT	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH2	HGNC	ENSG00000151655				281	1	0.35461	200	75	27.2727
ITIH2	0	genome.wustl.edu	37	10	7771947	7771947	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	7771947	7771947	G	A	SNP	ITIH2	ENST00000358415	human	ensembl	74_37	+1	known	missense	c.1312	p.V438I	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH2	HGNC	ENSG00000151655				106	0	0	93	25	21.1864
POLR3A	0	genome.wustl.edu	37	10	79764517	79764517	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	79764517	79764517	T	G	SNP	POLR3A	ENST00000372371	human	ensembl	74_37	-1	known	missense	c.2204	p.K735T	1.000	pfam_RNA_pol_Rpb1_4	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,smart_RNA_pol_N	-	no_errors	POLR3A	HGNC	ENSG00000148606				50	0	0	31	12	27.907
TAF3	0	genome.wustl.edu	37	10	8006390	8006390	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	8006390	8006390	C	T	SNP	TAF3	ENST00000344293	human	ensembl	74_37	+1	known	missense	c.917	p.S306F	0.998	NULL	pfam_BTP,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Histone-fold,smart_BTP,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	TAF3	HGNC	ENSG00000165632				80	0	0	73	19	20.6522
TAF3	0	genome.wustl.edu	37	10	8056685	8056685	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	8056685	8056685	C	T	SNP	TAF3	ENST00000344293	human	ensembl	74_37	+1	known	missense	c.2761	p.H921Y	1.000	superfamily_Znf_FYVE_PHD	pfam_BTP,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Histone-fold,smart_BTP,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	TAF3	HGNC	ENSG00000165632				21	0	0	10	5	33.3333
NRG3	0	genome.wustl.edu	37	10	83635626	83635626	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	83635626	83635626	C	T	SNP	NRG3	ENST00000404547	human	ensembl	74_37	+1	known	missense	c.530	p.A177V	1.000	NULL	pfscan_EG-like_dom	-	no_errors	NRG3	HGNC	ENSG00000185737				45	0	0	30	3	9.09091
GLUD1	0	genome.wustl.edu	37	10	88854214	88854214	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	88854214	88854214	T	G	SNP	GLUD1	ENST00000277865	human	ensembl	74_37	-1	known	missense	c.313	p.I105L	1.000	NULL	pfam_Glu/Leu/Phe/Val_DH_C,pfam_Glu/Leu/Phe/Val_DH_dimer_dom,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	-	no_errors	GLUD1	HGNC	ENSG00000148672				70	0	0	41	15	26.7857
PANK1	0	genome.wustl.edu	37	10	91371452	91371452	+	Splice_Site	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	91371452	91371452	C	T	SNP	PANK1	ENST00000307534	human	ensembl	74_37	-1	known	splice_site	c.1056+1	e2+1	1.000	-	-	-	no_errors	PANK1	HGNC	ENSG00000152782				102	0	0	74	24	24.4898
RPP30	0	genome.wustl.edu	37	10	92634643	92634643	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	92634643	92634643	G	A	SNP	RPP30	ENST00000413330	human	ensembl	74_37	+1	known	missense	c.100	p.A34T	1.000	superfamily_Pol/histidinol_Pase-like	pfam_RNase_P_p30,superfamily_Pol/histidinol_Pase-like	-	no_errors	RPP30	HGNC	ENSG00000148688				135	0	0	77	17	18.0851
TUBB8	0	genome.wustl.edu	37	10	93569	93569	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	93569	93569	C	T	SNP	TUBB8	ENST00000309812	human	ensembl	74_37	-1	known	missense	c.763	p.V255M	1.000	superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Gamma_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB8	HGNC	ENSG00000173876				59	0	0	45	8	15.0943
BTAF1	0	genome.wustl.edu	37	10	93749219	93749219	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	93749219	93749219	G	A	SNP	BTAF1	ENST00000265990	human	ensembl	74_37	+1	known	silent	c.2736	p.T912	0.722	pfam_DUF3535,superfamily_ARM-type_fold	pfam_DUF3535,pfam_SNF2_N,pfam_HEAT,pfam_Helicase_C,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	BTAF1	HGNC	ENSG00000095564				157	0	0	103	30	22.5564
CYP26A1	0	genome.wustl.edu	37	10	94836985	94836985	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	94836985	94836985	C	T	SNP	CYP26A1	ENST00000224356	human	ensembl	74_37	+1	known	missense	c.1418	p.T473I	0.999	superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP26A1	HGNC	ENSG00000095596				90	0	0	74	15	16.8539
MMP3	0	genome.wustl.edu	37	11	102714181	102714181	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	102714181	102714181	G	A	SNP	MMP3	ENST00000299855	human	ensembl	74_37	-1	known	missense	c.97	p.L33F	0.000	pirsf_Pept_M10A_Metazoans,pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP3	HGNC	ENSG00000149968				48	0	0	39	7	15.2174
ALKBH8	0	genome.wustl.edu	37	11	107427630	107427630	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	107427630	107427630	G	A	SNP	ALKBH8	ENST00000417449	human	ensembl	74_37	-1	known	missense	c.238	p.P80S	1.000	NULL	pfam_Methyltransf_11,pfam_AlkB_hom8_N,pfam_Oxoglu/Fe-dep_dioxygenase,pfam_Methyltransferase-rel	-	no_errors	ALKBH8	HGNC	ENSG00000137760				117	0	0	82	23	21.9048
ATM	0	genome.wustl.edu	37	11	108117798	108117798	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	108117798	108117798	C	T	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	missense	c.1009	p.R337C	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311				121	0	0	98	25	20.3252
SIK2	0	genome.wustl.edu	37	11	111591703	111591703	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	111591703	111591703	T	C	SNP	SIK2	ENST00000304987	human	ensembl	74_37	+1	known	missense	c.1861	p.Y621H	0.980	pirsf_Ser/Thr_kinase_SIK1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SIK2	HGNC	ENSG00000170145				201	0	0	128	38	22.8916
PPP2R1B	0	genome.wustl.edu	37	11	111597740	111597740	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	111597740	111597740	A	G	SNP	PPP2R1B	ENST00000311129	human	ensembl	74_37	-1	known	silent	c.1953	p.L651	0.060	NULL	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1B	HGNC	ENSG00000137713				110	0	0	73	24	24.7423
ATF4P4	0	genome.wustl.edu	37	11	113660472	113660472	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	113660472	113660472	G	A	SNP	ATF4P4	ENST00000393544	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ATF4P4	HGNC	ENSG00000256167				12	0	0	9	4	30.7692
HTR3A	0	genome.wustl.edu	37	11	113853876	113853876	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	113853876	113853876	G	A	SNP	HTR3A	ENST00000355556	human	ensembl	74_37	+1	known	missense	c.427	p.V143M	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_5HT3_rcpt_A,prints_5HT3_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_5HT3_rcpt_A,prints_5HT3_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	HTR3A	HGNC	ENSG00000166736				238	0	0	156	61	28.1106
SIDT2	0	genome.wustl.edu	37	11	117054505	117054505	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	117054505	117054505	T	A	SNP	SIDT2	ENST00000278951	human	ensembl	74_37	+1	known	missense	c.713	p.F238Y	1.000	NULL	NULL	-	no_errors	SIDT2	HGNC	ENSG00000149577				91	0	0	81	8	8.98876
RNF214	0	genome.wustl.edu	37	11	117152859	117152859	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	117152859	117152859	G	A	SNP	RNF214	ENST00000300650	human	ensembl	74_37	+1	known	missense	c.1585	p.A529T	0.868	NULL	pfscan_Znf_RING	-	no_errors	RNF214	HGNC	ENSG00000167257				221	0	0	154	48	23.7624
DSCAML1	0	genome.wustl.edu	37	11	117302319	117302319	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	117302319	117302319	C	T	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.5485	p.V1829M	0.966	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				106	0	0	100	30	23.0769
DSCAML1	0	genome.wustl.edu	37	11	117303931	117303931	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	117303931	117303931	G	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.5129	p.P1710L	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				75	0	0	42	4	8.69565
CXCR5	0	genome.wustl.edu	37	11	118765107	118765107	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	118765107	118765107	C	T	SNP	CXCR5	ENST00000292174	human	ensembl	74_37	+1	known	missense	c.854	p.A285V	0.009	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR5,prints_GPCR_Rhodpsn,prints_Chemokine_CXCR4,prints_ATII_rcpt	-	no_errors	CXCR5	HGNC	ENSG00000160683				85	0	0	63	21	25
SC5D	0	genome.wustl.edu	37	11	121177962	121177962	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	121177962	121177962	G	A	SNP	SC5D	ENST00000264027	human	ensembl	74_37	+1	known	missense	c.641	p.R214H	1.000	pfam_Fatty_acid_hydroxylase	pfam_Fatty_acid_hydroxylase	-	no_errors	SC5D	HGNC	ENSG00000109929				372	0	0	320	82	20.398
OR8B8	0	genome.wustl.edu	37	11	124310573	124310573	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	124310573	124310573	A	G	SNP	OR8B8	ENST00000328064	human	ensembl	74_37	-1	known	missense	c.409	p.S137P	0.483	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8B8	HGNC	ENSG00000197125				79	0	0	54	19	26.0274
TBRG1	0	genome.wustl.edu	37	11	124496862	124496862	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	124496862	124496862	T	A	SNP	TBRG1	ENST00000441174	human	ensembl	74_37	+1	known	missense	c.654	p.S218R	1.000	pfam_FYrich_N,smart_FYrich_N	pfam_FYrich_N,pfam_FYrich_C,smart_FYrich_N,smart_FYrich_C	-	no_errors	TBRG1	HGNC	ENSG00000154144				23	0	0	13	5	27.7778
HEPACAM	0	genome.wustl.edu	37	11	124794736	124794736	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	124794736	124794736	G	A	SNP	HEPACAM	ENST00000298251	human	ensembl	74_37	-1	known	silent	c.315	p.G105	0.999	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	HEPACAM	HGNC	ENSG00000165478				215	0	0	140	52	27.0833
STT3A	0	genome.wustl.edu	37	11	125484229	125484229	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	125484229	125484229	C	A	SNP	STT3A	ENST00000392708	human	ensembl	74_37	+1	known	missense	c.1682	p.S561Y	1.000	pfam_Oligo_trans_STT3	pfam_Oligo_trans_STT3	-	no_errors	STT3A	HGNC	ENSG00000134910				489	1	0.204082	369	105	22.1519
FOXRED1	0	genome.wustl.edu	37	11	126147409	126147409	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	126147409	126147409	T	C	SNP	FOXRED1	ENST00000263578	human	ensembl	74_37	+1	known	missense	c.1286	p.V429A	0.031	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase	-	no_errors	FOXRED1	HGNC	ENSG00000110074				99	0	0	94	25	21.0084
MUC5B	0	genome.wustl.edu	37	11	1263618	1263618	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	1263618	1263618	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.5517	p.P1839	0.024	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				68	0	0	43	13	23.2143
MUC5B	0	genome.wustl.edu	37	11	1272678	1272678	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	1272678	1272678	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.14577	p.T4859	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				61	0	0	51	19	27.1429
ARHGAP32	0	genome.wustl.edu	37	11	128842466	128842466	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	128842466	128842466	C	T	SNP	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	missense	c.3893	p.R1298H	0.976	NULL	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909				147	0	0	123	44	26.3473
ARHGAP32	0	genome.wustl.edu	37	11	128846512	128846512	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	128846512	128846512	T	C	SNP	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	missense	c.2098	p.T700A	1.000	NULL	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909				170	0	0	117	38	24.5161
ARHGAP32	0	genome.wustl.edu	37	11	128851443	128851443	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	128851443	128851443	C	A	SNP	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	nonsense	c.1606	p.E536*	1.000	superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909				150	0	0	90	34	27.4194
ST14	0	genome.wustl.edu	37	11	130060404	130060404	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	130060404	130060404	G	A	SNP	ST14	ENST00000278742	human	ensembl	74_37	+1	known	silent	c.690	p.T230	0.095	pirsf_Peptidase_S1A_matripase,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_Peptidase_S1A_matripase,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_LDrepeatLR_classA_rpt,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	ST14	HGNC	ENSG00000149418				48	0	0	27	14	34.1463
IGSF9B	0	genome.wustl.edu	37	11	133791085	133791085	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	133791085	133791085	C	T	SNP	IGSF9B	ENST00000321016	human	ensembl	74_37	-1	known	silent	c.2535	p.T845	0.477	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9B	HGNC	ENSG00000080854				65	0	0	41	11	21.1538
IGSF9B	0	genome.wustl.edu	37	11	133794769	133794769	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	133794769	133794769	C	T	SNP	IGSF9B	ENST00000321016	human	ensembl	74_37	-1	known	missense	c.2065	p.V689I	0.998	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9B	HGNC	ENSG00000080854				163	0	0	114	32	21.9178
ARNTL	0	genome.wustl.edu	37	11	13393835	13393835	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	13393835	13393835	G	A	SNP	ARNTL	ENST00000403290	human	ensembl	74_37	+1	known	missense	c.946	p.A316T	0.999	prints_Nuc_translocat	pfam_PAS_fold,pfam_PAS_fold_3,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	ARNTL	HGNC	ENSG00000133794				121	0	0	104	33	24.0876
JAM3	0	genome.wustl.edu	37	11	134014848	134014848	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	134014848	134014848	C	T	SNP	JAM3	ENST00000529443	human	ensembl	74_37	+1	known	missense	c.706	p.R236C	0.964	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	JAM3	HGNC	ENSG00000166086				121	0	0	81	23	22.1154
NCAPD3	0	genome.wustl.edu	37	11	134022911	134022911	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	134022911	134022911	G	T	SNP	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	silent	c.4425	p.P1475	0.994	NULL	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503				193	0	0	141	38	21.2291
GLB1L2	0	genome.wustl.edu	37	11	134212847	134212847	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	134212847	134212847	T	C	SNP	GLB1L2	ENST00000339772	human	ensembl	74_37	+1	known	splice_site	c.284+2	e2+2	1.000	-	-	-	no_errors	GLB1L2	HGNC	ENSG00000149328				96	0	0	77	16	17.2043
ABCC8	0	genome.wustl.edu	37	11	17428178	17428178	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	17428178	17428178	G	A	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.3323	p.A1108V	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071				41	0	0	39	15	27.7778
ABCC8	0	genome.wustl.edu	37	11	17491700	17491700	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	17491700	17491700	G	A	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	silent	c.360	p.S120	0.067	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071				45	0	0	34	9	20.9302
MYOD1	0	genome.wustl.edu	37	11	17741819	17741819	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	17741819	17741819	C	T	SNP	MYOD1	ENST00000250003	human	ensembl	74_37	+1	known	silent	c.490	p.L164	1.000	superfamily_bHLH_dom,smart_bHLH_dom	pfam_Basic,pfam_Myf5,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYOD1	HGNC	ENSG00000129152				30	0	0	19	5	20.8333
UEVLD	0	genome.wustl.edu	37	11	18587900	18587900	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	18587900	18587900	T	C	SNP	UEVLD	ENST00000396197	human	ensembl	74_37	-1	known	missense	c.487	p.T163A	1.000	NULL	pfam_UEV_N,pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Lactate_DH/Glyco_Ohase_4_C,prints_L-lactate/malate_DH	-	no_errors	UEVLD	HGNC	ENSG00000151116				107	0	0	85	32	27.3504
ANO3	0	genome.wustl.edu	37	11	26556078	26556078	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	26556078	26556078	C	T	SNP	ANO3	ENST00000256737	human	ensembl	74_37	+1	known	silent	c.945	p.R315	0.993	NULL	pfam_Anoctamin	-	no_errors	ANO3	HGNC	ENSG00000134343				143	0	0	113	34	23.1293
METTL15	0	genome.wustl.edu	37	11	28134963	28134963	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	28134963	28134963	G	A	SNP	METTL15	ENST00000303459	human	ensembl	74_37	+1	known	missense	c.82	p.V28I	0.001	NULL	pfam_RsmH,superfamily_SAM-dep_MeTrfase_MraW_recog,tigrfam_RsmH	-	no_errors	METTL15	HGNC	ENSG00000169519				116	0	0	90	28	23.7288
TCP11L1	0	genome.wustl.edu	37	11	33087459	33087459	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	33087459	33087459	C	T	SNP	TCP11L1	ENST00000527661	human	ensembl	74_37	+1	known	silent	c.1056	p.V352	0.985	pfam_Tcp11	pfam_Tcp11	-	no_errors	TCP11L1	HGNC	ENSG00000176148				293	0	0	204	67	24.7232
HIPK3	0	genome.wustl.edu	37	11	33308232	33308232	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	33308232	33308232	C	T	SNP	HIPK3	ENST00000303296	human	ensembl	74_37	+1	known	missense	c.272	p.A91V	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK3	HGNC	ENSG00000110422				121	0	0	109	24	18.0451
HIPK3	0	genome.wustl.edu	37	11	33308858	33308858	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	33308858	33308858	C	T	SNP	HIPK3	ENST00000303296	human	ensembl	74_37	+1	known	missense	c.898	p.R300W	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK3	HGNC	ENSG00000110422				280	0	0	204	40	16.3934
NUP98	0	genome.wustl.edu	37	11	3712640	3712640	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	3712640	3712640	T	G	SNP	NUP98	ENST00000324932	human	ensembl	74_37	-1	known	missense	c.4391	p.E1464A	0.998	pfam_Nup96	pfam_Nup96,pfam_Peptidase_S59,superfamily_Peptidase_S59	-	no_errors	NUP98	HGNC	ENSG00000110713				124	0	0	77	14	15.3846
NUP98	0	genome.wustl.edu	37	11	3733808	3733808	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	3733808	3733808	C	T	SNP	NUP98	ENST00000324932	human	ensembl	74_37	-1	known	missense	c.2728	p.A910T	1.000	NULL	pfam_Nup96,pfam_Peptidase_S59,superfamily_Peptidase_S59	-	no_errors	NUP98	HGNC	ENSG00000110713				186	0	0	111	46	29.2994
OR52K1	0	genome.wustl.edu	37	11	4510535	4510535	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	4510535	4510535	G	A	SNP	OR52K1	ENST00000307632	human	ensembl	74_37	+1	known	silent	c.405	p.T135	0.023	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52K1	HGNC	ENSG00000196778				75	0	0	66	14	17.5
CHST1	0	genome.wustl.edu	37	11	45671376	45671376	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	45671376	45671376	G	A	SNP	CHST1	ENST00000308064	human	ensembl	74_37	-1	known	silent	c.1098	p.Y366	0.988	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST1	HGNC	ENSG00000175264				113	0	0	94	23	19.6581
CHST1	0	genome.wustl.edu	37	11	45671881	45671881	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	45671881	45671881	C	T	SNP	CHST1	ENST00000308064	human	ensembl	74_37	-1	known	missense	c.593	p.R198H	0.743	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST1	HGNC	ENSG00000175264				37	0	0	27	8	22.8571
GYLTL1B	0	genome.wustl.edu	37	11	45949777	45949777	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	45949777	45949777	C	T	SNP	GYLTL1B	ENST00000325468	human	ensembl	74_37	+1	known	missense	c.1804	p.R602W	1.000	NULL	pfam_Glyco_trans_8	-	no_errors	GYLTL1B	HGNC	ENSG00000165905				139	1	0.714286	87	15	14.7059
GYLTL1B	0	genome.wustl.edu	37	11	45949840	45949840	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	45949840	45949840	C	T	SNP	GYLTL1B	ENST00000325468	human	ensembl	74_37	+1	known	missense	c.1867	p.P623S	0.999	NULL	pfam_Glyco_trans_8	-	no_errors	GYLTL1B	HGNC	ENSG00000165905				219	1	0.454545	163	39	19.3069
PHF21A	0	genome.wustl.edu	37	11	45967444	45967444	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	45967444	45967444	T	C	SNP	PHF21A	ENST00000257821	human	ensembl	74_37	-1	known	missense	c.1399	p.T467A	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21A	HGNC	ENSG00000135365				80	0	0	78	21	21.2121
CKAP5	0	genome.wustl.edu	37	11	46837768	46837768	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	46837768	46837768	T	G	SNP	CKAP5	ENST00000415402	human	ensembl	74_37	-1	known	missense	c.439	p.T147P	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,superfamily_Homing_endonucl,pfscan_HEAT_type_2	-	no_errors	CKAP5	HGNC	ENSG00000175216				262	1	0.380228	205	37	15.2893
MADD	0	genome.wustl.edu	37	11	47310991	47310991	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	47310991	47310991	C	T	SNP	MADD	ENST00000311027	human	ensembl	74_37	+1	known	silent	c.2763	p.S921	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514				389	0	0	267	79	22.8324
AGBL2	0	genome.wustl.edu	37	11	47726206	47726206	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	47726206	47726206	G	A	SNP	AGBL2	ENST00000357610	human	ensembl	74_37	-1	known	missense	c.475	p.R159C	0.056	NULL	pfam_Peptidase_M14	-	no_errors	AGBL2	HGNC	ENSG00000165923				182	0	0	124	31	20
PTPRJ	0	genome.wustl.edu	37	11	48157734	48157734	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	48157734	48157734	T	C	SNP	PTPRJ	ENST00000418331	human	ensembl	74_37	+1	known	missense	c.1759	p.Y587H	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRJ	HGNC	ENSG00000149177				182	0	0	118	41	25.7862
LOC440040	0	genome.wustl.edu	37	11	49831725	49831725	+	RNA	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	49831725	49831725	A	G	SNP	LOC440040	ENST00000527477	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.306	-	-	-	no_errors	RP11-707M1.1	Clone_based_vega_gene	ENSG00000205035				323	0	0	226	64	22.069
HBE1	0	genome.wustl.edu	37	11	5290793	5290793	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	5290793	5290793	A	G	SNP	HBE1	ENST00000292896	human	ensembl	74_37	-1	known	missense	c.206	p.L69P	1.000	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Myoglobin	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b,prints_Myoglobin	-	no_errors	HBE1	HGNC	ENSG00000213931				172	1	0.578035	119	28	19.0476
OR51I2	0	genome.wustl.edu	37	11	5474944	5474944	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	5474944	5474944	G	A	SNP	OR51I2	ENST00000341449	human	ensembl	74_37	+1	known	missense	c.226	p.A76T	0.348	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51I2	HGNC	ENSG00000187918				194	1	0.512821	138	32	18.8235
UBQLN3	0	genome.wustl.edu	37	11	5529920	5529920	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	5529920	5529920	G	C	SNP	UBQLN3	ENST00000311659	human	ensembl	74_37	-1	known	missense	c.869	p.T290S	0.008	NULL	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN3	HGNC	ENSG00000175520				196	0	0	148	40	21.2766
OR5D18	0	genome.wustl.edu	37	11	55587205	55587205	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	55587205	55587205	G	A	SNP	OR5D18	ENST00000333976	human	ensembl	74_37	+1	known	missense	c.100	p.A34T	0.006	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D18	HGNC	ENSG00000186119				238	0	0	194	63	24.5136
OR5T2	0	genome.wustl.edu	37	11	56000654	56000654	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	56000654	56000654	T	C	SNP	OR5T2	ENST00000313264	human	ensembl	74_37	-1	known	missense	c.8	p.Y3C	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T2	HGNC	ENSG00000181718				251	0	0	186	43	18.7773
APLNR	0	genome.wustl.edu	37	11	57004240	57004240	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	57004240	57004240	A	G	SNP	APLNR	ENST00000257254	human	ensembl	74_37	-1	known	missense	c.239	p.V80A	1.000	pfam_GPCR_Rhodpsn,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM,prints_APJ_rcpt,prints_GPCR_Rhodpsn,prints_ATII_rcpt	-	no_errors	APLNR	HGNC	ENSG00000134817				77	0	0	41	18	30.5085
TNKS1BP1	0	genome.wustl.edu	37	11	57069355	57069355	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	57069355	57069355	G	A	SNP	TNKS1BP1	ENST00000358252	human	ensembl	74_37	-1	known	missense	c.4897	p.R1633W	1.000	NULL	NULL	-	no_errors	TNKS1BP1	HGNC	ENSG00000149115				84	0	0	67	12	15.1899
SSRP1	0	genome.wustl.edu	37	11	57095279	57095279	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	57095279	57095279	C	A	SNP	SSRP1	ENST00000278412	human	ensembl	74_37	-1	known	missense	c.1689	p.E563D	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_SSRP1_dom,pfam_DUF1747,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom,prints_SSrcognition	-	no_errors	SSRP1	HGNC	ENSG00000149136				220	0	0	138	53	27.7487
ZDHHC5	0	genome.wustl.edu	37	11	57467412	57467412	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	57467412	57467412	G	A	SNP	ZDHHC5	ENST00000287169	human	ensembl	74_37	+1	known	missense	c.2057	p.G686D	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC5	HGNC	ENSG00000156599				84	0	0	51	15	22.7273
OR10Q1	0	genome.wustl.edu	37	11	57995413	57995413	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	57995413	57995413	C	T	SNP	OR10Q1	ENST00000316770	human	ensembl	74_37	-1	known	missense	c.935	p.R312H	0.262	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Q1	HGNC	ENSG00000180475				327	1	0.304878	213	60	21.978
FAM111B	0	genome.wustl.edu	37	11	58893587	58893587	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	58893587	58893587	C	T	SNP	FAM111B	ENST00000343597	human	ensembl	74_37	+1	known	nonsense	c.2017	p.R673*	0.000	superfamily_Trypsin-like_Pept_dom	superfamily_Trypsin-like_Pept_dom	-	no_errors	FAM111B	HGNC	ENSG00000189057				265	0	0	140	59	29.6482
STX3	0	genome.wustl.edu	37	11	59559674	59559674	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	59559674	59559674	G	A	SNP	STX3	ENST00000337979	human	ensembl	74_37	+1	known	missense	c.452	p.R151Q	1.000	superfamily_t-SNARE	pfam_Syntaxin_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX3	HGNC	ENSG00000166900				43	0	0	20	7	25.9259
TCN1	0	genome.wustl.edu	37	11	59629106	59629106	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	59629106	59629106	G	A	SNP	TCN1	ENST00000257264	human	ensembl	74_37	-1	known	silent	c.450	p.D150	0.000	pfam_Cbl-bd_transpt_euk	pfam_Cbl-bd_transpt_euk	-	no_errors	TCN1	HGNC	ENSG00000134827				164	0	0	116	35	23.1788
PTGDR2	0	genome.wustl.edu	37	11	60620738	60620738	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	60620738	60620738	A	G	SNP	PTGDR2	ENST00000332539	human	ensembl	74_37	-1	known	missense	c.458	p.L153P	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Formyl_pep_rcpt,prints_Anphylx_rcpt	-	no_errors	PTGDR2	HGNC	ENSG00000183134				24	0	0	9	7	43.75
TMEM132A	0	genome.wustl.edu	37	11	60695270	60695270	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	60695270	60695270	C	T	SNP	TMEM132A	ENST00000005286	human	ensembl	74_37	+1	known	missense	c.473	p.P158L	1.000	NULL	NULL	-	no_errors	TMEM132A	HGNC	ENSG00000006118				76	0	0	44	15	25.4237
CD5	0	genome.wustl.edu	37	11	60886386	60886386	+	Splice_Site	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	60886386	60886386	G	T	SNP	CD5	ENST00000347785	human	ensembl	74_37	+1	known	splice_site	c.401-1	e4-1	0.998	-	-	-	no_errors	CD5	HGNC	ENSG00000110448				48	0	0	24	8	25
OR56B4	0	genome.wustl.edu	37	11	6129484	6129484	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	6129484	6129484	G	A	SNP	OR56B4	ENST00000316529	human	ensembl	74_37	+1	known	missense	c.476	p.G159D	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR56B4	HGNC	ENSG00000180919				221	0	0	148	40	21.2766
IRF7	0	genome.wustl.edu	37	11	613969	613969	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	613969	613969	G	C	SNP	IRF7	ENST00000330243	human	ensembl	74_37	-1	known	missense	c.787	p.P263A	0.002	NULL	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF7	HGNC	ENSG00000185507				22	0	0	17	14	45.1613
AHNAK	0	genome.wustl.edu	37	11	62297658	62297658	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	62297658	62297658	C	T	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	missense	c.4231	p.V1411I	0.051	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942				475	0	0	370	115	23.7113
METTL12	0	genome.wustl.edu	37	11	62434242	62434242	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	62434242	62434242	C	A	SNP	METTL12	ENST00000532971	human	ensembl	74_37	+1	known	missense	c.442	p.L148M	0.998	pfam_Methyltransf_11	pfam_Methyltransf_11	-	no_errors	METTL12	HGNC	ENSG00000214756				111	0	0	71	21	22.8261
HNRNPUL2	0	genome.wustl.edu	37	11	62487636	62487636	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	62487636	62487636	G	A	SNP	HNRNPUL2	ENST00000301785	human	ensembl	74_37	-1	known	missense	c.1639	p.R547W	0.996	pfam_Chromatin_KTI12,superfamily_P-loop_NTPase	pfam_SPRY_rcpt,pfam_SAP_dom,pfam_Zeta_toxin_domain,pfam_Chromatin_KTI12,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL2	HGNC	ENSG00000214753				246	0	0	189	61	24.4
TTC9C	0	genome.wustl.edu	37	11	62496515	62496515	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	62496515	62496515	C	T	SNP	TTC9C	ENST00000513247	human	ensembl	74_37	+1	known	silent	c.594	p.N198	0.006	NULL	NULL	-	no_errors	TTC9C	HGNC	ENSG00000162222				68	0	0	66	13	16.4557
SLC22A9	0	genome.wustl.edu	37	11	63137671	63137671	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	63137671	63137671	G	A	SNP	SLC22A9	ENST00000279178	human	ensembl	74_37	+1	known	missense	c.143	p.R48H	1.000	NULL	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A9	HGNC	ENSG00000149742				393	0	0	249	67	21.2025
FLRT1	0	genome.wustl.edu	37	11	63884234	63884234	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	63884234	63884234	C	T	SNP	FLRT1	ENST00000246841	human	ensembl	74_37	+1	known	silent	c.495	p.T165	0.994	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT1	HGNC	ENSG00000126500				64	0	0	42	10	19.2308
NUDT22	0	genome.wustl.edu	37	11	63994403	63994403	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	63994403	63994403	C	A	SNP	NUDT22	ENST00000279206	human	ensembl	74_37	+1	known	silent	c.279	p.T93	1.000	NULL	superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT22	HGNC	ENSG00000149761				60	0	0	57	14	19.7183
SLC22A12	0	genome.wustl.edu	37	11	64367852	64367852	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	64367852	64367852	G	A	SNP	SLC22A12	ENST00000377574	human	ensembl	74_37	+1	known	silent	c.1299	p.L433	0.903	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A12	HGNC	ENSG00000197891				13	0	0	10	3	23.0769
PYGM	0	genome.wustl.edu	37	11	64522768	64522768	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	64522768	64522768	G	A	SNP	PYGM	ENST00000164139	human	ensembl	74_37	-1	known	missense	c.832	p.R278C	0.970	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGM	HGNC	ENSG00000068976				92	0	0	67	19	22.093
ATG2A	0	genome.wustl.edu	37	11	64678286	64678286	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	64678286	64678286	T	C	SNP	ATG2A	ENST00000421419	human	ensembl	74_37	-1	known	missense	c.1607	p.Y536C	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2A	HGNC	ENSG00000110046				16	0	0	17	4	19.0476
PPP2R5B	0	genome.wustl.edu	37	11	64695857	64695857	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	64695857	64695857	C	T	SNP	PPP2R5B	ENST00000164133	human	ensembl	74_37	+1	known	missense	c.682	p.R228W	1.000	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5B	HGNC	ENSG00000068971				104	1	0.952381	80	22	21.5686
SLC22A20	0	genome.wustl.edu	37	11	65000741	65000741	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	65000741	65000741	C	T	SNP	SLC22A20	ENST00000525437	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.030	-	-	-	no_errors	SLC22A20	HGNC	ENSG00000197847				34	0	0	23	10	30.303
FRMD8	0	genome.wustl.edu	37	11	65156922	65156922	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	65156922	65156922	G	A	SNP	FRMD8	ENST00000317568	human	ensembl	74_37	+1	known	missense	c.176	p.R59H	0.917	smart_Band_41_domain,pfscan_FERM_domain	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD8	HGNC	ENSG00000126391				67	0	0	50	21	29.5775
LTBP3	0	genome.wustl.edu	37	11	65321528	65321528	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	65321528	65321528	C	T	SNP	LTBP3	ENST00000301873	human	ensembl	74_37	-1	known	missense	c.655	p.A219T	0.989	NULL	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056				48	0	0	35	4	10.2564
PCNXL3	0	genome.wustl.edu	37	11	65396168	65396168	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	65396168	65396168	G	A	SNP	PCNXL3	ENST00000355703	human	ensembl	74_37	+1	known	missense	c.3805	p.V1269M	1.000	NULL	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136				35	0	0	28	4	12.5
GAL3ST3	0	genome.wustl.edu	37	11	65810516	65810516	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	65810516	65810516	C	T	SNP	GAL3ST3	ENST00000312006	human	ensembl	74_37	-1	known	missense	c.758	p.R253H	1.000	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST3	HGNC	ENSG00000175229				52	0	0	44	15	25.4237
GAL3ST3	0	genome.wustl.edu	37	11	65810617	65810617	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	65810617	65810617	G	A	SNP	GAL3ST3	ENST00000312006	human	ensembl	74_37	-1	known	silent	c.657	p.D219	0.199	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST3	HGNC	ENSG00000175229				76	0	0	79	22	21.7822
ADRBK1	0	genome.wustl.edu	37	11	67047323	67047323	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	67047323	67047323	A	T	SNP	ADRBK1	ENST00000308595	human	ensembl	74_37	+1	known	missense	c.455	p.E152V	1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	ADRBK1	HGNC	ENSG00000173020				85	0	0	68	16	19.0476
PITPNM1	0	genome.wustl.edu	37	11	67259599	67259599	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	67259599	67259599	T	C	SNP	PITPNM1	ENST00000356404	human	ensembl	74_37	-1	known	missense	c.3640	p.S1214G	1.000	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697				50	0	0	53	3	5.35714
PITPNM1	0	genome.wustl.edu	37	11	67269822	67269822	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	67269822	67269822	C	A	SNP	PITPNM1	ENST00000356404	human	ensembl	74_37	-1	known	missense	c.356	p.G119V	1.000	pfam_PI_transfer,prints_PI_transfer	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697				120	0	0	68	20	22.7273
OR2D2	0	genome.wustl.edu	37	11	6913632	6913632	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	6913632	6913632	C	T	SNP	OR2D2	ENST00000299459	human	ensembl	74_37	-1	known	missense	c.100	p.V34I	0.019	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Olfact_rcpt	-	no_errors	OR2D2	HGNC	ENSG00000166368				119	0	0	81	31	27.6786
RBMXL2	0	genome.wustl.edu	37	11	7111248	7111248	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	7111248	7111248	G	A	SNP	RBMXL2	ENST00000306904	human	ensembl	74_37	+1	known	silent	c.897	p.P299	1.000	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL2	HGNC	ENSG00000170748				29	0	0	11	9	45
NUMA1	0	genome.wustl.edu	37	11	71719794	71719794	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	71719794	71719794	T	C	SNP	NUMA1	ENST00000393695	human	ensembl	74_37	-1	known	missense	c.5156	p.D1719G	1.000	NULL	superfamily_Prefoldin	-	no_errors	NUMA1	HGNC	ENSG00000137497				147	0	0	104	38	26.7606
CLPB	0	genome.wustl.edu	37	11	72091323	72091323	+	Splice_Site	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	72091323	72091323	A	G	SNP	CLPB	ENST00000294053	human	ensembl	74_37	-1	known	splice_site	c.646+2	e4+2	1.000	-	-	-	no_errors	CLPB	HGNC	ENSG00000162129				71	0	0	44	15	25.4237
CHRDL2	0	genome.wustl.edu	37	11	74415529	74415529	+	Splice_Site	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	74415529	74415529	A	G	SNP	CHRDL2	ENST00000263671	human	ensembl	74_37	-1	known	splice_site	c.751+2	e7+2	0.998	-	-	-	no_errors	CHRDL2	HGNC	ENSG00000054938				69	0	0	39	12	23.5294
CHRDL2	0	genome.wustl.edu	37	11	74417543	74417543	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	74417543	74417543	G	T	SNP	CHRDL2	ENST00000263671	human	ensembl	74_37	-1	known	missense	c.571	p.L191I	0.000	NULL	pfam_VWF_C,smart_VWF_C,pfscan_VWF_C	-	no_errors	CHRDL2	HGNC	ENSG00000054938				130	0	0	76	22	22.449
SPCS2	0	genome.wustl.edu	37	11	74688037	74688037	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	74688037	74688037	T	C	SNP	SPCS2	ENST00000263672	human	ensembl	74_37	+1	known	silent	c.630	p.P210	1.000	pfam_SigPept_cplx_su2	pfam_SigPept_cplx_su2	-	no_errors	SPCS2	HGNC	ENSG00000118363				49	0	0	35	6	14.6341
UVRAG	0	genome.wustl.edu	37	11	75852178	75852178	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	75852178	75852178	G	A	SNP	UVRAG	ENST00000356136	human	ensembl	74_37	+1	known	silent	c.1821	p.G607	0.001	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	UVRAG	HGNC	ENSG00000198382				60	0	0	47	17	26.5625
C11orf30	0	genome.wustl.edu	37	11	76207359	76207359	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	76207359	76207359	A	G	SNP	C11orf30	ENST00000334736	human	ensembl	74_37	+1	known	silent	c.1209	p.Q403	1.000	NULL	pfam_ENT_N,pfscan_ENT_N	-	no_errors	C11orf30	HGNC	ENSG00000158636				232	0	0	193	69	26.3359
LRRC32	0	genome.wustl.edu	37	11	76371656	76371656	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	76371656	76371656	A	G	SNP	LRRC32	ENST00000260061	human	ensembl	74_37	-1	known	silent	c.981	p.I327	0.383	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC32	HGNC	ENSG00000137507				44	0	0	34	9	20.9302
CAPN5	0	genome.wustl.edu	37	11	76825332	76825332	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	76825332	76825332	A	C	SNP	CAPN5	ENST00000278559	human	ensembl	74_37	+1	known	missense	c.551	p.D184A	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN5	HGNC	ENSG00000149260				252	1	0.395257	178	43	19.457
PAK1	0	genome.wustl.edu	37	11	77090970	77090970	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	77090970	77090970	A	G	SNP	PAK1	ENST00000278568	human	ensembl	74_37	-1	known	missense	c.260	p.V87A	1.000	pfam_CRIB_dom,superfamily_WASP_C,smart_CRIB_dom,pfscan_CRIB_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,superfamily_WASP_C,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom	-	no_errors	PAK1	HGNC	ENSG00000149269				132	0	0	118	30	20.2703
TENM4	0	genome.wustl.edu	37	11	78412977	78412977	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	78412977	78412977	G	A	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.4681	p.R1561W	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				167	0	0	116	28	19.4444
FOLH1B	0	genome.wustl.edu	37	11	89395322	89395322	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	89395322	89395322	C	T	SNP	FOLH1B	ENST00000525540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	FOLH1B	HGNC	ENSG00000134612				74	0	0	54	3	5.26316
C11orf16	0	genome.wustl.edu	37	11	8947037	8947037	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	8947037	8947037	C	T	SNP	C11orf16	ENST00000326053	human	ensembl	74_37	-1	known	missense	c.1177	p.G393R	0.009	NULL	NULL	-	no_errors	C11orf16	HGNC	ENSG00000176029				112	0	0	92	33	26.4
TMEM9B	0	genome.wustl.edu	37	11	8969887	8969887	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	8969887	8969887	G	A	SNP	TMEM9B	ENST00000534025	human	ensembl	74_37	-1	known	missense	c.577	p.R193W	1.000	pfam_TMEM9	pfam_TMEM9	-	no_errors	TMEM9B	HGNC	ENSG00000175348				213	0	0	129	44	25.4335
SCUBE2	0	genome.wustl.edu	37	11	9069032	9069032	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	9069032	9069032	C	T	SNP	SCUBE2	ENST00000457346	human	ensembl	74_37	-1	known	missense	c.1873	p.V625I	1.000	NULL	pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE2	HGNC	ENSG00000175356				82	0	0	60	22	26.8293
HEPHL1	0	genome.wustl.edu	37	11	93837908	93837908	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	93837908	93837908	G	C	SNP	HEPHL1	ENST00000315765	human	ensembl	74_37	+1	known	missense	c.2897	p.R966T	0.960	superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPHL1	HGNC	ENSG00000181333				216	0	0	151	52	25.6158
KDM4E	0	genome.wustl.edu	37	11	94759423	94759423	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	94759423	94759423	C	A	SNP	KDM4E	ENST00000450979	human	ensembl	74_37	+1	known	silent	c.702	p.G234	0.928	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,pfam_TF_JmjN,smart_TF_JmjN,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4E	HGNC	ENSG00000235268				53	0	0	51	13	20.3125
UTP20	0	genome.wustl.edu	37	12	101736764	101736764	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	101736764	101736764	G	A	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	missense	c.4342	p.V1448I	0.997	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800				205	0	0	139	39	21.9101
SPIC	0	genome.wustl.edu	37	12	101880330	101880330	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	101880330	101880330	C	T	SNP	SPIC	ENST00000299272	human	ensembl	74_37	+1	known	silent	c.528	p.Y176	0.994	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	SPIC	HGNC	ENSG00000166211				138	0	0	93	43	31.6176
RAD52	0	genome.wustl.edu	37	12	1025516	1025516	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	1025516	1025516	T	C	SNP	RAD52	ENST00000358495	human	ensembl	74_37	-1	known	missense	c.859	p.S287G	0.000	NULL	pfam_Rad52_Rad22,tigrfam_DNA_recomb/repair_Rad52	-	no_errors	RAD52	HGNC	ENSG00000002016				29	0	0	19	5	20.8333
STAB2	0	genome.wustl.edu	37	12	104044321	104044321	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	104044321	104044321	C	A	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	missense	c.1222	p.L408M	1.000	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011				78	0	0	63	14	18.1818
STAB2	0	genome.wustl.edu	37	12	104071360	104071360	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	104071360	104071360	G	A	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	missense	c.2776	p.A926T	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011				123	0	0	99	15	13.1579
NUAK1	0	genome.wustl.edu	37	12	106532257	106532257	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	106532257	106532257	C	A	SNP	NUAK1	ENST00000261402	human	ensembl	74_37	-1	known	nonsense	c.175	p.E59*	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NUAK1	HGNC	ENSG00000074590				35	0	0	26	8	23.5294
MTERFD3	0	genome.wustl.edu	37	12	107372251	107372251	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	107372251	107372251	G	A	SNP	MTERFD3	ENST00000240050	human	ensembl	74_37	-1	known	missense	c.242	p.A81V	0.908	pfam_Mit_transcrip_term-rel	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD3	HGNC	ENSG00000120832				328	0	0	201	69	25.5556
FAM222A	0	genome.wustl.edu	37	12	110206229	110206229	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	110206229	110206229	G	A	SNP	FAM222A	ENST00000358906	human	ensembl	74_37	+1	known	silent	c.495	p.A165	0.647	NULL	NULL	-	no_errors	FAM222A	HGNC	ENSG00000139438				30	0	0	16	5	23.8095
FAM222A	0	genome.wustl.edu	37	12	110206380	110206380	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	110206380	110206380	G	A	SNP	FAM222A	ENST00000358906	human	ensembl	74_37	+1	known	missense	c.646	p.A216T	0.953	NULL	NULL	-	no_errors	FAM222A	HGNC	ENSG00000139438				49	0	0	21	7	25
GIT2	0	genome.wustl.edu	37	12	110421431	110421431	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	110421431	110421431	T	G	SNP	GIT2	ENST00000355312	human	ensembl	74_37	-1	known	missense	c.474	p.Q158H	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_GIT1_C,pfam_GIT_SHD,pfam_ArfGAP,superfamily_Ankyrin_rpt-contain_dom,smart_ArfGAP,smart_Ankyrin_rpt,smart_GIT_SHD,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	GIT2	HGNC	ENSG00000139436				226	1	0.440529	149	42	21.9895
ATP2A2	0	genome.wustl.edu	37	12	110783139	110783139	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	110783139	110783139	T	C	SNP	ATP2A2	ENST00000539276	human	ensembl	74_37	+1	known	missense	c.2693	p.M898T	1.000	pfam_ATPase_P-typ_cation-transptr_C	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A2	HGNC	ENSG00000174437				277	1	0.359712	209	66	24
MYL2	0	genome.wustl.edu	37	12	111358330	111358330	+	Splice_Site	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	111358330	111358330	C	T	SNP	MYL2	ENST00000228841	human	ensembl	74_37	-1	known	splice_site	c.3+1	e1+1	1.000	-	-	-	no_errors	MYL2	HGNC	ENSG00000111245				107	0	0	68	13	16.0494
ACAD10	0	genome.wustl.edu	37	12	112185167	112185167	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	112185167	112185167	C	T	SNP	ACAD10	ENST00000455480	human	ensembl	74_37	+1	known	silent	c.2556	p.N852	0.003	pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase_NM_dom	pfam_Aminoglycoside_PTrfase,pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_DH_2_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_HAD-like_dom,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_Kinase-like_dom,superfamily_AcylCo_DH/oxidase_C,superfamily_HAD-like_dom,prints_HAD-SF_hydro_IA,tigrfam_HAD-SF_ppase_IA/epoxid_hydro_N,tigrfam_HAD-SF_hydro_IA	-	no_errors	ACAD10	HGNC	ENSG00000111271				193	0	0	121	41	25.3086
ERP29	0	genome.wustl.edu	37	12	112460088	112460088	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	112460088	112460088	G	A	SNP	ERP29	ENST00000261735	human	ensembl	74_37	+1	known	missense	c.418	p.A140T	1.000	pfam_ERp29_N,superfamily_Thioredoxin-like_fold,pirsf_ER_p29	pfam_ERp29_N,pfam_ER_p29_C,superfamily_ER_p29_C,superfamily_Thioredoxin-like_fold,pirsf_ER_p29	-	no_errors	ERP29	HGNC	ENSG00000089248				74	0	0	70	19	21.3483
LHX5	0	genome.wustl.edu	37	12	113906172	113906172	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	113906172	113906172	G	A	SNP	LHX5	ENST00000261731	human	ensembl	74_37	-1	known	silent	c.435	p.L145	1.000	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX5	HGNC	ENSG00000089116				47	0	0	44	12	21.4286
MED13L	0	genome.wustl.edu	37	12	116408482	116408482	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	116408482	116408482	T	C	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	missense	c.5984	p.H1995R	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066				176	1	0.564972	116	36	23.6842
TESC	0	genome.wustl.edu	37	12	117494684	117494684	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	117494684	117494684	T	C	SNP	TESC	ENST00000392545	human	ensembl	74_37	-1	known	missense	c.295	p.N99D	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	TESC	HGNC	ENSG00000088992				121	0	0	79	30	27.5229
NOS1	0	genome.wustl.edu	37	12	117672429	117672429	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	117672429	117672429	G	A	SNP	NOS1	ENST00000317775	human	ensembl	74_37	-1	known	missense	c.3176	p.A1059V	1.000	pfam_FAD-binding_1,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_euk,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250				43	0	0	42	14	25
WSB2	0	genome.wustl.edu	37	12	118474213	118474213	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	118474213	118474213	C	T	SNP	WSB2	ENST00000315436	human	ensembl	74_37	-1	known	missense	c.763	p.V255I	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_SOCS_C,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WSB2	HGNC	ENSG00000176871				211	0	0	161	23	12.5
KNTC1	0	genome.wustl.edu	37	12	123055441	123055441	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	123055441	123055441	T	C	SNP	KNTC1	ENST00000333479	human	ensembl	74_37	+1	known	silent	c.1879	p.L627	1.000	NULL	pfam_RZZ-complex_KNTC1/ROD_C,superfamily_Quino_amine_DH_bsu,superfamily_WD40_repeat_dom,superfamily_PAH	-	no_errors	KNTC1	HGNC	ENSG00000184445				14	0	0	15	6	28.5714
HCAR1	0	genome.wustl.edu	37	12	123214828	123214828	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	123214828	123214828	G	A	SNP	HCAR1	ENST00000356987	human	ensembl	74_37	-1	known	missense	c.59	p.P20L	0.977	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	HCAR1	HGNC	ENSG00000196917				43	0	0	29	5	14.7059
EIF2B1	0	genome.wustl.edu	37	12	124106442	124106442	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	124106442	124106442	G	A	SNP	EIF2B1	ENST00000424014	human	ensembl	74_37	-1	known	missense	c.779	p.A260V	0.000	pfam_IF-2B-related	pfam_IF-2B-related	-	no_errors	EIF2B1	HGNC	ENSG00000111361				86	0	0	36	13	26.5306
ATP6V0A2	0	genome.wustl.edu	37	12	124209219	124209219	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	124209219	124209219	G	A	SNP	ATP6V0A2	ENST00000330342	human	ensembl	74_37	+1	known	missense	c.313	p.E105K	1.000	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	ATP6V0A2	HGNC	ENSG00000185344				380	0	0	265	91	25.5618
SCARB1	0	genome.wustl.edu	37	12	125294823	125294823	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	125294823	125294823	G	A	SNP	SCARB1	ENST00000415380	human	ensembl	74_37	-1	known	missense	c.739	p.H247Y	0.864	pfam_CD36	pfam_CD36,prints_CD36,prints_CD36_antigen	-	no_errors	SCARB1	HGNC	ENSG00000073060				55	0	0	31	10	24.3902
MIR613	0	genome.wustl.edu	37	12	12917591	12917591	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	12917591	12917591	C	T	SNP	MIR613	ENST00000385248	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR613	HGNC	ENSG00000207983				136	1	0.729927	92	20	17.8571
FZD10	0	genome.wustl.edu	37	12	130648515	130648515	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	130648515	130648515	G	A	SNP	FZD10	ENST00000229030	human	ensembl	74_37	+1	known	missense	c.1028	p.G343D	1.000	pfam_Frizzled,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD10	HGNC	ENSG00000111432				45	0	0	32	15	31.9149
GPR133	0	genome.wustl.edu	37	12	131451073	131451073	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	131451073	131451073	C	T	SNP	GPR133	ENST00000261654	human	ensembl	74_37	+1	known	missense	c.169	p.L57F	0.992	superfamily_ConA-like_lec_gl_sf	pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR133	HGNC	ENSG00000111452				76	0	0	55	9	14.0625
GSG1	0	genome.wustl.edu	37	12	13238096	13238096	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	13238096	13238096	G	T	SNP	GSG1	ENST00000324458	human	ensembl	74_37	-1	known	missense	c.828	p.F276L	1.000	NULL	pfam_GSG-1	-	no_errors	GSG1	HGNC	ENSG00000111305				85	0	0	49	19	27.9412
ULK1	0	genome.wustl.edu	37	12	132393458	132393458	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	132393458	132393458	C	T	SNP	ULK1	ENST00000321867	human	ensembl	74_37	+1	known	missense	c.506	p.A169V	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ser/Thr_kinase_C,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK1	HGNC	ENSG00000177169				41	0	0	31	3	8.82353
PDE3A	0	genome.wustl.edu	37	12	20766556	20766556	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	20766556	20766556	C	T	SNP	PDE3A	ENST00000359062	human	ensembl	74_37	+1	known	silent	c.1191	p.P397	0.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3A	HGNC	ENSG00000172572				128	0	0	107	30	21.8978
SLCO1A2	0	genome.wustl.edu	37	12	21448696	21448696	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	21448696	21448696	C	T	SNP	SLCO1A2	ENST00000307378	human	ensembl	74_37	-1	known	missense	c.1106	p.G369E	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1A2	HGNC	ENSG00000084453				93	0	0	71	20	21.978
GYS2	0	genome.wustl.edu	37	12	21693395	21693395	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	21693395	21693395	C	T	SNP	GYS2	ENST00000261195	human	ensembl	74_37	-1	known	silent	c.1758	p.R586	0.985	pfam_Glycogen_synth,pfam_Glyco_trans_1	pfam_Glycogen_synth,pfam_Glyco_trans_1	-	no_errors	GYS2	HGNC	ENSG00000111713				392	0	0	292	76	20.6522
ST8SIA1	0	genome.wustl.edu	37	12	22354586	22354586	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	22354586	22354586	A	G	SNP	ST8SIA1	ENST00000396037	human	ensembl	74_37	-1	known	missense	c.971	p.M324T	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA1	HGNC	ENSG00000111728				183	1	0.543478	141	40	22.0994
ITPR2	0	genome.wustl.edu	37	12	26572040	26572040	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	26572040	26572040	G	A	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.7052	p.A2351V	0.002	pfam_Ion_trans_dom	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104				71	0	0	56	21	27.2727
CACNA1C	0	genome.wustl.edu	37	12	2705039	2705039	+	Splice_Site	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	2705039	2705039	G	T	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	splice_site	c.2664-1	e20-1	1.000	-	-	-	no_errors	CACNA1C	HGNC	ENSG00000151067				102	0	0	99	21	17.5
FGFR1OP2	0	genome.wustl.edu	37	12	27113500	27113500	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	27113500	27113500	G	A	SNP	FGFR1OP2	ENST00000229395	human	ensembl	74_37	+1	known	missense	c.449	p.R150Q	1.000	superfamily_DNA-bd_dom_put	pfam_SIKE,superfamily_DNA-bd_dom_put	-	no_errors	FGFR1OP2	HGNC	ENSG00000111790				136	0	0	98	23	19.0083
DDX11	0	genome.wustl.edu	37	12	31254802	31254802	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	31254802	31254802	C	T	SNP	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	silent	c.2088	p.C696	0.896	tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573				134	0	0	97	30	23.622
KIAA1551	0	genome.wustl.edu	37	12	32138395	32138395	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	32138395	32138395	G	A	SNP	KIAA1551	ENST00000312561	human	ensembl	74_37	+1	known	silent	c.4506	p.V1502	0.000	NULL	NULL	-	no_errors	KIAA1551	HGNC	ENSG00000174718				91	0	0	52	16	23.5294
FGD4	0	genome.wustl.edu	37	12	32777363	32777363	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	32777363	32777363	C	T	SNP	FGD4	ENST00000427716	human	ensembl	74_37	+1	known	nonsense	c.1519	p.Q507*	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD4	HGNC	ENSG00000139132				42	0	0	38	13	25.4902
KDM5A	0	genome.wustl.edu	37	12	416792	416792	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	416792	416792	G	A	SNP	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	missense	c.3758	p.A1253V	1.000	pfam_Lys_sp_deMease_like_dom	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614				108	0	0	81	25	23.5849
ADAMTS20	0	genome.wustl.edu	37	12	43837660	43837660	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	43837660	43837660	C	T	SNP	ADAMTS20	ENST00000389420	human	ensembl	74_37	-1	known	missense	c.2224	p.A742T	0.000	pfam_ADAM_spacer1	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157				288	0	0	209	58	21.7228
KDM5A	0	genome.wustl.edu	37	12	443551	443551	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	443551	443551	G	A	SNP	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	missense	c.1346	p.P449L	1.000	smart_JmjC_dom,pfscan_JmjC_dom	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614				352	0	0	293	65	18.1564
TMEM117	0	genome.wustl.edu	37	12	44782314	44782314	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	44782314	44782314	C	T	SNP	TMEM117	ENST00000266534	human	ensembl	74_37	+1	known	silent	c.1404	p.C468	0.994	NULL	NULL	-	no_errors	TMEM117	HGNC	ENSG00000139173				248	0	0	185	41	18.1416
ARID2	0	genome.wustl.edu	37	12	46211569	46211569	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	46211569	46211569	G	A	SNP	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	missense	c.535	p.V179I	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079				145	0	0	106	25	19.084
SCAF11	0	genome.wustl.edu	37	12	46322307	46322307	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	46322307	46322307	A	G	SNP	SCAF11	ENST00000369367	human	ensembl	74_37	-1	known	missense	c.1177	p.S393P	0.881	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	SCAF11	HGNC	ENSG00000139218				235	0	0	177	44	19.9095
PFKM	0	genome.wustl.edu	37	12	48501948	48501948	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	48501948	48501948	C	T	SNP	PFKM	ENST00000547581	human	ensembl	74_37	+1	known	missense	c.176	p.T59I	0.004	NULL	NULL	-	no_errors	PFKM	HGNC	ENSG00000152556				248	0	0	154	40	20.6186
ZNF641	0	genome.wustl.edu	37	12	48737327	48737327	+	Nonsense_Mutation	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	48737327	48737327	G	C	SNP	ZNF641	ENST00000301042	human	ensembl	74_37	-1	known	nonsense	c.746	p.S249*	0.989	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF641	HGNC	ENSG00000167528				141	0	0	88	24	21.4286
DDX23	0	genome.wustl.edu	37	12	49225894	49225894	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	49225894	49225894	G	A	SNP	DDX23	ENST00000308025	human	ensembl	74_37	-1	known	silent	c.2031	p.C677	0.343	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX23	HGNC	ENSG00000174243				106	0	0	70	16	18.6047
KMT2D	0	genome.wustl.edu	37	12	49434444	49434444	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	49434444	49434444	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.7109	p.R2370H	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				66	0	0	32	5	13.5135
TROAP	0	genome.wustl.edu	37	12	49722991	49722991	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	49722991	49722991	G	A	SNP	TROAP	ENST00000257909	human	ensembl	74_37	+1	known	silent	c.1068	p.R356	0.982	NULL	NULL	-	no_errors	TROAP	HGNC	ENSG00000135451				307	0	0	230	25	9.80392
KCNH3	0	genome.wustl.edu	37	12	49937067	49937067	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	49937067	49937067	G	A	SNP	KCNH3	ENST00000257981	human	ensembl	74_37	+1	known	missense	c.589	p.G197R	1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_4,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH3	HGNC	ENSG00000135519				46	0	0	35	17	32.6923
AQP6	0	genome.wustl.edu	37	12	50369362	50369362	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	50369362	50369362	G	A	SNP	AQP6	ENST00000315520	human	ensembl	74_37	+1	known	missense	c.757	p.V253I	0.000	prints_Aquaporin_6	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,prints_Aquaporin_6,tigrfam_MIP	-	no_errors	AQP6	HGNC	ENSG00000086159				119	0	0	70	33	32.0388
SLC4A8	0	genome.wustl.edu	37	12	51844755	51844755	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	51844755	51844755	C	T	SNP	SLC4A8	ENST00000453097	human	ensembl	74_37	+1	known	missense	c.226	p.R76W	0.997	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A8	HGNC	ENSG00000050438				19	0	0	13	9	40.9091
KRT2	0	genome.wustl.edu	37	12	53044214	53044214	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	53044214	53044214	T	C	SNP	KRT2	ENST00000309680	human	ensembl	74_37	-1	known	missense	c.709	p.K237E	0.931	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT2	HGNC	ENSG00000172867				365	0	0	280	73	20.6799
KRT8	0	genome.wustl.edu	37	12	53295004	53295004	+	Splice_Site	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	53295004	53295004	C	A	SNP	KRT8	ENST00000293308	human	ensembl	74_37	-1	known	splice_site	c.534-1	e3-1	1.000	-	-	-	no_errors	KRT8	HGNC	ENSG00000170421				217	0	0	147	39	20.9677
SP7	0	genome.wustl.edu	37	12	53722463	53722463	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	53722463	53722463	C	T	SNP	SP7	ENST00000303846	human	ensembl	74_37	-1	known	missense	c.763	p.G255R	0.556	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP7	HGNC	ENSG00000170374				58	0	0	31	10	24.3902
SP1	0	genome.wustl.edu	37	12	53776718	53776718	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	53776718	53776718	T	C	SNP	SP1	ENST00000327443	human	ensembl	74_37	+1	known	silent	c.987	p.T329	0.990	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP1	HGNC	ENSG00000185591				193	0	0	120	37	23.5669
LRP1	0	genome.wustl.edu	37	12	57537482	57537482	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	57537482	57537482	C	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.349	p.R117C	0.006	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				65	0	0	40	11	21.5686
LRP1	0	genome.wustl.edu	37	12	57577935	57577935	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	57577935	57577935	C	A	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	silent	c.5997	p.R1999	0.736	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				54	0	0	29	13	30.9524
LRP1	0	genome.wustl.edu	37	12	57602495	57602495	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	57602495	57602495	A	G	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.12040	p.T4014A	0.993	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				64	0	0	45	12	21.0526
AGAP2	0	genome.wustl.edu	37	12	58124646	58124646	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	58124646	58124646	C	T	SNP	AGAP2	ENST00000547588	human	ensembl	74_37	-1	known	missense	c.2236	p.A746T	0.997	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP2	HGNC	ENSG00000135439				27	0	0	25	9	26.4706
METTL21B	0	genome.wustl.edu	37	12	58174183	58174183	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	58174183	58174183	C	T	SNP	METTL21B	ENST00000300209	human	ensembl	74_37	+1	known	silent	c.435	p.D145	1.000	pfam_Nicotinamide_N-MeTfrase-like	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL21B	HGNC	ENSG00000123427				109	0	0	55	23	29.4872
VWF	0	genome.wustl.edu	37	12	6128544	6128544	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	6128544	6128544	A	G	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.4040	p.V1347A	0.927	pirsf_VWF,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				104	0	0	76	24	24
MON2	0	genome.wustl.edu	37	12	62943525	62943525	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	62943525	62943525	G	A	SNP	MON2	ENST00000393630	human	ensembl	74_37	+1	known	missense	c.2834	p.C945Y	1.000	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold	-	no_errors	MON2	HGNC	ENSG00000061987				213	0	0	138	40	22.4719
PPM1H	0	genome.wustl.edu	37	12	63195794	63195794	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	63195794	63195794	G	A	SNP	PPM1H	ENST00000228705	human	ensembl	74_37	-1	known	silent	c.558	p.V186	0.756	superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1H	HGNC	ENSG00000111110				78	0	0	58	11	15.942
PLEKHG6	0	genome.wustl.edu	37	12	6427575	6427575	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	6427575	6427575	C	T	SNP	PLEKHG6	ENST00000011684	human	ensembl	74_37	+1	known	nonsense	c.1264	p.R422*	0.904	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG6	HGNC	ENSG00000008323				56	0	0	33	16	32.6531
GNS	0	genome.wustl.edu	37	12	65113872	65113872	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	65113872	65113872	T	C	SNP	GNS	ENST00000258145	human	ensembl	74_37	-1	known	missense	c.1510	p.N504D	1.000	superfamily_Alkaline_phosphatase_core,pirsf_GlcNAc_6-SO4ase	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core,pirsf_GlcNAc_6-SO4ase	-	no_errors	GNS	HGNC	ENSG00000135677				429	0	0	309	105	25.3623
CAND1	0	genome.wustl.edu	37	12	67692780	67692780	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	67692780	67692780	T	C	SNP	CAND1	ENST00000545606	human	ensembl	74_37	+1	known	missense	c.905	p.L302P	1.000	superfamily_ARM-type_fold	pfam_TATA-bd_TIP120,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	CAND1	HGNC	ENSG00000111530				106	0	0	64	16	20
GPR162	0	genome.wustl.edu	37	12	6934773	6934773	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	6934773	6934773	G	A	SNP	GPR162	ENST00000311268	human	ensembl	74_37	+1	known	missense	c.992	p.R331H	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR162,prints_GCR_153/162	-	no_errors	GPR162	HGNC	ENSG00000250510				19	0	0	4	4	50
GPR162	0	genome.wustl.edu	37	12	6935968	6935968	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	6935968	6935968	C	A	SNP	GPR162	ENST00000311268	human	ensembl	74_37	+1	known	missense	c.1366	p.L456M	0.999	prints_GPR162	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR162,prints_GCR_153/162	-	no_errors	GPR162	HGNC	ENSG00000250510				104	0	0	91	34	27.2
TSPAN8	0	genome.wustl.edu	37	12	71531789	71531789	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	71531789	71531789	C	T	SNP	TSPAN8	ENST00000247829	human	ensembl	74_37	-1	known	missense	c.388	p.A130T	0.000	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN8	HGNC	ENSG00000127324				174	0	0	135	39	22.4138
C1S	0	genome.wustl.edu	37	12	7169970	7169970	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	7169970	7169970	C	T	SNP	C1S	ENST00000328916	human	ensembl	74_37	+1	known	missense	c.197	p.A66V	0.024	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	C1S	HGNC	ENSG00000182326				229	2	0.865801	161	41	20.297
SLC2A14	0	genome.wustl.edu	37	12	7984225	7984225	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	7984225	7984225	C	T	SNP	SLC2A14	ENST00000396589	human	ensembl	74_37	-1	known	missense	c.316	p.G106R	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A14	HGNC	ENSG00000173262				98	0	0	57	15	20.8333
TMTC2	0	genome.wustl.edu	37	12	83379735	83379735	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	83379735	83379735	C	T	SNP	TMTC2	ENST00000321196	human	ensembl	74_37	+1	known	silent	c.1980	p.P660	0.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_TPR-4,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC2	HGNC	ENSG00000179104				306	0	0	257	42	14.0468
FAM90A1	0	genome.wustl.edu	37	12	8374755	8374755	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	8374755	8374755	G	A	SNP	FAM90A1	ENST00000307435	human	ensembl	74_37	-1	known	missense	c.1058	p.P353L	0.001	NULL	NULL	-	no_errors	FAM90A1	HGNC	ENSG00000171847				50	0	0	29	12	29.2683
PLXNC1	0	genome.wustl.edu	37	12	94562942	94562942	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	94562942	94562942	A	G	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	missense	c.1076	p.Q359R	0.002	superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040				109	0	0	100	31	23.6641
APAF1	0	genome.wustl.edu	37	12	99126270	99126270	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	99126270	99126270	G	A	SNP	APAF1	ENST00000551964	human	ensembl	74_37	+1	known	missense	c.3673	p.V1225M	1.000	superfamily_WD40_repeat_dom,pirsf_Apoptotic_pept-activating_1	pfam_WD40_repeat,pfam_NB-ARC,pfam_CARD,superfamily_WD40_repeat_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pirsf_Apoptotic_pept-activating_1,pfscan_CARD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Disease_R,prints_G-protein_beta_WD-40_rep	-	no_errors	APAF1	HGNC	ENSG00000120868				108	0	0	78	25	24.2718
KDELC1	0	genome.wustl.edu	37	13	103436732	103436732	+	RNA	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	103436732	103436732	A	C	SNP	KDELC1	ENST00000460338	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KDELC1	HGNC	ENSG00000134901				28	0	0	19	5	20.8333
FAM155A	0	genome.wustl.edu	37	13	107822998	107822998	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	107822998	107822998	T	C	SNP	FAM155A	ENST00000375915	human	ensembl	74_37	-1	known	silent	c.1224	p.S408	0.997	NULL	NULL	-	no_errors	FAM155A	HGNC	ENSG00000204442				104	0	0	75	20	21.0526
ARHGEF7	0	genome.wustl.edu	37	13	111953116	111953116	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	111953116	111953116	C	T	SNP	ARHGEF7	ENST00000370623	human	ensembl	74_37	+1	known	missense	c.1940	p.P647L	1.000	NULL	pfam_DH-domain,pfam_SH3_2,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_CH-domain,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CH-domain,smart_CH-domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain	-	no_errors	ARHGEF7	HGNC	ENSG00000102606				200	0	0	142	38	21.1111
CENPJ	0	genome.wustl.edu	37	13	25457398	25457398	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	25457398	25457398	C	T	SNP	CENPJ	ENST00000381884	human	ensembl	74_37	-1	known	missense	c.3934	p.G1312S	1.000	pfam_Tcp10_C_dom	pfam_Tcp10_C_dom	-	no_errors	CENPJ	HGNC	ENSG00000151849				398	0	0	248	69	21.7666
LNX2	0	genome.wustl.edu	37	13	28136599	28136599	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	28136599	28136599	C	A	SNP	LNX2	ENST00000316334	human	ensembl	74_37	-1	known	missense	c.1175	p.G392V	0.989	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	LNX2	HGNC	ENSG00000139517				273	0	0	154	53	25.6039
FLT3	0	genome.wustl.edu	37	13	28636133	28636133	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	28636133	28636133	G	A	SNP	FLT3	ENST00000380982	human	ensembl	74_37	-1	known	missense	c.239	p.A80V	0.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FLT3	HGNC	ENSG00000122025				139	0	0	86	35	28.9256
FLT1	0	genome.wustl.edu	37	13	29008007	29008007	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	29008007	29008007	A	G	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	silent	c.762	p.A254	0.092	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755				257	0	0	159	40	20.1005
SLC46A3	0	genome.wustl.edu	37	13	29287374	29287374	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	29287374	29287374	C	T	SNP	SLC46A3	ENST00000266943	human	ensembl	74_37	-1	known	missense	c.503	p.R168Q	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC46A3	HGNC	ENSG00000139508				151	0	0	81	35	30.1724
FRY	0	genome.wustl.edu	37	13	32868578	32868578	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	32868578	32868578	A	G	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	missense	c.8654	p.D2885G	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910				80	0	0	46	14	23.3333
BRCA2	0	genome.wustl.edu	37	13	32972903	32972903	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	32972903	32972903	T	G	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.10253	p.I3418S	0.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618				81	0	0	57	22	27.8481
SPG20	0	genome.wustl.edu	37	13	36900787	36900787	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	36900787	36900787	A	G	SNP	SPG20	ENST00000355182	human	ensembl	74_37	-1	known	missense	c.1213	p.C405R	0.232	NULL	pfam_Senescence/spartin,pfam_MIT,smart_MIT	-	no_errors	SPG20	HGNC	ENSG00000133104				123	0	0	68	16	19.0476
SMAD9	0	genome.wustl.edu	37	13	37439797	37439797	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	37439797	37439797	G	A	SNP	SMAD9	ENST00000379826	human	ensembl	74_37	-1	known	nonsense	c.880	p.R294*	0.998	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD9	HGNC	ENSG00000120693				157	0	0	116	29	20
PROSER1	0	genome.wustl.edu	37	13	39603448	39603448	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	39603448	39603448	T	G	SNP	PROSER1	ENST00000352251	human	ensembl	74_37	-1	known	missense	c.245	p.D82A	1.000	NULL	NULL	-	no_errors	PROSER1	HGNC	ENSG00000120685				143	0	0	102	25	19.685
SLC25A15	0	genome.wustl.edu	37	13	41379273	41379273	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	41379273	41379273	G	A	SNP	SLC25A15	ENST00000338625	human	ensembl	74_37	+1	known	missense	c.334	p.A112T	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A15	HGNC	ENSG00000102743				118	0	0	91	42	31.5789
MTRF1	0	genome.wustl.edu	37	13	41827154	41827154	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	41827154	41827154	G	T	SNP	MTRF1	ENST00000430347	human	ensembl	74_37	-1	known	missense	c.559	p.L187I	0.753	pfam_PCRF,smart_PCRF	pfam_Pep_chain_release_fac_I_II,pfam_PCRF,smart_PCRF	-	no_errors	MTRF1	HGNC	ENSG00000120662				94	0	0	86	5	5.49451
NAA16	0	genome.wustl.edu	37	13	41943362	41943362	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	41943362	41943362	A	T	SNP	NAA16	ENST00000379406	human	ensembl	74_37	+1	known	missense	c.1890	p.E630D	0.133	pirsf_NatA_aux_su	pfam_TPR_2,pfam_NatA_aux_su,pfam_TPR_1,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA16	HGNC	ENSG00000172766				148	0	0	82	29	26.1261
SLC25A30	0	genome.wustl.edu	37	13	45980026	45980026	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	45980026	45980026	C	T	SNP	SLC25A30	ENST00000519676	human	ensembl	74_37	-1	known	missense	c.299	p.R100H	0.082	superfamily_Mt_carrier_dom,prints_Mit_uncoupling	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_uncoupling,prints_Mit_carrier	-	no_errors	SLC25A30	HGNC	ENSG00000174032				91	0	0	67	12	15.1899
RB1	0	genome.wustl.edu	37	13	48919235	48919235	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	48919235	48919235	T	G	SNP	RB1	ENST00000267163	human	ensembl	74_37	+1	known	missense	c.400	p.L134V	0.987	pfam_RB_N,superfamily_Cyclin-like	pfam_RB_C,pfam_RB_A,pfam_RB_B,pfam_RB_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RB1	HGNC	ENSG00000139687				157	0	0	116	32	21.6216
SERPINE3	0	genome.wustl.edu	37	13	51936035	51936035	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	51936035	51936035	A	G	SNP	SERPINE3	ENST00000521255	human	ensembl	74_37	+1	known	missense	c.1177	p.T393A	0.006	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINE3	HGNC	ENSG00000253309				177	0	0	82	23	21.9048
ALG11	0	genome.wustl.edu	37	13	52602510	52602510	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	52602510	52602510	C	T	SNP	ALG11	ENST00000523764	human	ensembl	74_37	+1	novel	missense	c.100	p.P34S	1.000	NULL	NULL	-	no_errors	ALG11	HGNC	ENSG00000253710				231	0	0	129	33	20.3704
PCDH8	0	genome.wustl.edu	37	13	53420927	53420927	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	53420927	53420927	A	G	SNP	PCDH8	ENST00000377942	human	ensembl	74_37	-1	known	missense	c.1645	p.S549P	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH8	HGNC	ENSG00000136099				8	0	0	5	2	28.5714
PCDH17	0	genome.wustl.edu	37	13	58208186	58208186	+	Silent	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	58208186	58208186	C	G	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	silent	c.1506	p.G502	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946				65	0	0	44	15	25.4237
PCDH17	0	genome.wustl.edu	37	13	58208609	58208609	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	58208609	58208609	C	T	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	silent	c.1929	p.G643	0.992	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946				265	0	0	174	26	13
DACH1	0	genome.wustl.edu	37	13	72146986	72146986	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	72146986	72146986	T	C	SNP	DACH1	ENST00000359684	human	ensembl	74_37	-1	known	missense	c.1447	p.T483A	1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH1	HGNC	ENSG00000165659				136	0	0	84	22	20.7547
TBC1D4	0	genome.wustl.edu	37	13	75901914	75901914	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	75901914	75901914	G	A	SNP	TBC1D4	ENST00000377636	human	ensembl	74_37	-1	known	missense	c.1780	p.R594W	0.991	NULL	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D4	HGNC	ENSG00000136111				231	1	0.431034	161	60	27.1493
UCHL3	0	genome.wustl.edu	37	13	76179898	76179898	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	76179898	76179898	C	T	SNP	UCHL3	ENST00000377595	human	ensembl	74_37	+1	known	missense	c.643	p.R215C	1.000	pfam_Peptidase_C12	pfam_Peptidase_C12,prints_Peptidase_C12	-	no_errors	UCHL3	HGNC	ENSG00000118939				141	0	0	84	26	23.6364
MIR379	0	genome.wustl.edu	37	14	101488429	101488429	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	101488429	101488429	C	T	SNP	MIR379	ENST00000362218	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR379	HGNC	ENSG00000199088				102	0	0	77	16	17.2043
TECPR2	0	genome.wustl.edu	37	14	102910059	102910059	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	102910059	102910059	G	A	SNP	TECPR2	ENST00000359520	human	ensembl	74_37	+1	known	missense	c.2828	p.R943Q	0.999	superfamily_RCC1/BLIP-II,smart_Beta-propeller_rpt_TECPR	pfam_Beta-propeller_rpt_TECPR,superfamily_WD40_repeat_dom,superfamily_RCC1/BLIP-II,smart_WD40_repeat,smart_Beta-propeller_rpt_TECPR	-	no_errors	TECPR2	HGNC	ENSG00000196663				60	0	0	46	7	13.2075
POTEG	0	genome.wustl.edu	37	14	19553815	19553815	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	19553815	19553815	C	A	SNP	POTEG	ENST00000409832	human	ensembl	74_37	+1	known	nonsense	c.399	p.Y133*	0.002	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEG	HGNC	ENSG00000222036				355	0	0	321	23	6.68605
LOC101929948	0	genome.wustl.edu	37	14	19563232	19563232	+	RNA	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	19563232	19563232	T	C	SNP	LOC101929948	ENST00000548748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.050	-	-	-	no_errors	CTD-2311B13.5	Clone_based_vega_gene	ENSG00000258252				18	0	0	13	4	23.5294
OR4M1	0	genome.wustl.edu	37	14	20248598	20248598	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	20248598	20248598	A	G	SNP	OR4M1	ENST00000315957	human	ensembl	74_37	+1	known	silent	c.117	p.L39	0.901	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4M1	HGNC	ENSG00000176299				1022	0	0	853	126	12.8703
OR4K15	0	genome.wustl.edu	37	14	20443718	20443718	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	20443718	20443718	A	C	SNP	OR4K15	ENST00000305051	human	ensembl	74_37	+1	known	missense	c.41	p.Q14P	0.055	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K15	HGNC	ENSG00000169488				223	1	0.446429	126	37	22.6994
OSGEP	0	genome.wustl.edu	37	14	20915437	20915437	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	20915437	20915437	A	G	SNP	OSGEP	ENST00000206542	human	ensembl	74_37	-1	known	missense	c.970	p.Y324H	1.000	NULL	pfam_Gcp-like_dom,prints_KAE1/YgjD,tigrfam_KAE1/YgjD	-	no_errors	OSGEP	HGNC	ENSG00000092094				312	1	0.319489	229	69	23.1544
RNASE4	0	genome.wustl.edu	37	14	21167799	21167799	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	21167799	21167799	T	C	SNP	RNASE4	ENST00000304704	human	ensembl	74_37	+1	known	missense	c.269	p.I90T	0.067	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE4	HGNC	ENSG00000258818				252	0	0	164	49	23.0047
CHD8	0	genome.wustl.edu	37	14	21862288	21862288	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	21862288	21862288	C	T	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	missense	c.5666	p.R1889H	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888				81	0	0	49	20	28.9855
CHD8	0	genome.wustl.edu	37	14	21868764	21868764	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	21868764	21868764	G	A	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	nonsense	c.4378	p.R1460*	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888				58	0	0	35	18	33.9623
CHD8	0	genome.wustl.edu	37	14	21896123	21896123	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	21896123	21896123	G	A	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	silent	c.1506	p.R502	0.992	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888				116	0	0	94	25	21.0084
MYH7	0	genome.wustl.edu	37	14	23885266	23885266	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	23885266	23885266	G	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.4900	p.R1634C	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054				110	0	0	82	24	22.6415
JPH4	0	genome.wustl.edu	37	14	24040254	24040254	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	24040254	24040254	C	T	SNP	JPH4	ENST00000356300	human	ensembl	74_37	-1	known	silent	c.1686	p.T562	0.000	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH4	HGNC	ENSG00000092051				93	0	0	55	18	24.6575
PCK2	0	genome.wustl.edu	37	14	24572402	24572402	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	24572402	24572402	G	A	SNP	PCK2	ENST00000216780	human	ensembl	74_37	+1	known	missense	c.1406	p.R469H	1.000	pfam_PEP_carboxykinase_GTP,pirsf_PEP_carboxykinase_GTP	pfam_PEP_carboxykinase_GTP,superfamily_PEP_carboxykinase_N,pirsf_PEP_carboxykinase_GTP	-	no_errors	PCK2	HGNC	ENSG00000100889				70	0	0	39	12	23.5294
RIPK3	0	genome.wustl.edu	37	14	24806443	24806443	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	24806443	24806443	T	C	SNP	RIPK3	ENST00000216274	human	ensembl	74_37	-1	known	missense	c.1124	p.Q375R	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RIPK3	HGNC	ENSG00000129465				203	0	0	163	49	23.1132
NFATC4	0	genome.wustl.edu	37	14	24846139	24846139	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	24846139	24846139	A	G	SNP	NFATC4	ENST00000413692	human	ensembl	74_37	+1	known	missense	c.2885	p.H962R	0.197	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC4	HGNC	ENSG00000100968				12	0	0	10	4	28.5714
COCH	0	genome.wustl.edu	37	14	31348147	31348147	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	31348147	31348147	A	G	SNP	COCH	ENST00000216361	human	ensembl	74_37	+1	known	missense	c.370	p.T124A	0.978	superfamily_LCCL	pfam_VWF_A,pfam_LCCL,superfamily_LCCL,smart_LCCL,smart_VWF_A,pfscan_LCCL,pfscan_VWF_A	-	no_errors	COCH	HGNC	ENSG00000100473				266	0	0	209	42	16.7331
WDHD1	0	genome.wustl.edu	37	14	55411081	55411081	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	55411081	55411081	C	T	SNP	WDHD1	ENST00000360586	human	ensembl	74_37	-1	known	missense	c.3158	p.R1053Q	1.000	superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_WD40_repeat,pfam_DUF3639,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,superfamily_HMG_box_dom,smart_WD40_repeat,smart_HMG_box_dom,pfscan_HMG_box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDHD1	HGNC	ENSG00000198554				190	0	0	120	33	21.5686
SOCS4	0	genome.wustl.edu	37	14	55510977	55510977	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	55510977	55510977	C	T	SNP	SOCS4	ENST00000339298	human	ensembl	74_37	+1	known	silent	c.1218	p.I406	0.979	pfam_SOCS_C,smart_SOCS_C,pfscan_SOCS_C	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS4	HGNC	ENSG00000180008				164	0	0	124	38	23.4568
FBXO34	0	genome.wustl.edu	37	14	55818441	55818441	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	55818441	55818441	C	T	SNP	FBXO34	ENST00000313833	human	ensembl	74_37	+1	known	nonsense	c.1333	p.R445*	0.006	NULL	superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO34	HGNC	ENSG00000178974				307	0	0	237	69	22.549
ATG14	0	genome.wustl.edu	37	14	55836623	55836623	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	55836623	55836623	C	T	SNP	ATG14	ENST00000247178	human	ensembl	74_37	-1	known	missense	c.1193	p.R398Q	0.878	NULL	pfam_UV_resistance/autophagy_Atg14	-	no_errors	ATG14	HGNC	ENSG00000126775				119	0	0	100	9	8.25688
TMEM260	0	genome.wustl.edu	37	14	57052563	57052563	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	57052563	57052563	C	T	SNP	TMEM260	ENST00000261556	human	ensembl	74_37	+1	known	missense	c.277	p.R93C	1.000	pfam_DUF2723	pfam_DUF2723	-	no_errors	TMEM260	HGNC	ENSG00000070269				318	0	0	235	63	21.1409
EXOC5	0	genome.wustl.edu	37	14	57714400	57714400	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	57714400	57714400	G	A	SNP	EXOC5	ENST00000413566	human	ensembl	74_37	-1	known	missense	c.58	p.R20C	0.996	NULL	pfam_Sec10-like	-	no_errors	EXOC5	HGNC	ENSG00000070367				11	0	0	4	3	42.8571
AP5M1	0	genome.wustl.edu	37	14	57735870	57735870	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	57735870	57735870	G	A	SNP	AP5M1	ENST00000554213	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	AP5M1	HGNC	ENSG00000053770				14	0	0	7	2	22.2222
PPP1R36	0	genome.wustl.edu	37	14	65054921	65054921	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	65054921	65054921	C	T	SNP	PPP1R36	ENST00000298705	human	ensembl	74_37	+1	known	silent	c.990	p.N330	0.015	NULL	NULL	-	no_errors	PPP1R36	HGNC	ENSG00000165807				215	0	0	129	42	24.5614
PLEKHG3	0	genome.wustl.edu	37	14	65208796	65208796	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	65208796	65208796	T	C	SNP	PLEKHG3	ENST00000394691	human	ensembl	74_37	+1	known	missense	c.2561	p.L854P	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG3	HGNC	ENSG00000126822				52	0	0	61	12	16.4384
FNTB	0	genome.wustl.edu	37	14	65520041	65520041	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	65520041	65520041	G	A	SNP	FNTB	ENST00000447296	human	ensembl	74_37	+1	known	silent	c.1143	p.A381	0.000	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_Prenyltrans,pfam_Transcrpt_activator_Churchill,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	FNTB	HGNC	ENSG00000257365				52	0	0	29	14	32.5581
MAP3K9	0	genome.wustl.edu	37	14	71200020	71200020	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	71200020	71200020	C	T	SNP	MAP3K9	ENST00000555993	human	ensembl	74_37	-1	known	missense	c.2108	p.R703H	0.386	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_Regulat_G_prot_signal_superfam,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K9	HGNC	ENSG00000006432				46	0	0	38	9	19.1489
RBM25	0	genome.wustl.edu	37	14	73554751	73554751	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	73554751	73554751	G	A	SNP	RBM25	ENST00000261973	human	ensembl	74_37	+1	known	missense	c.425	p.R142H	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_PWI_dom,pfam_RRM_dom,superfamily_PWI_dom,smart_RRM_dom,smart_PWI_dom,pfscan_RRM_dom	-	no_errors	RBM25	HGNC	ENSG00000119707				145	0	0	111	22	16.5414
CCDC176	0	genome.wustl.edu	37	14	74514756	74514756	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	74514756	74514756	T	C	SNP	CCDC176	ENST00000394009	human	ensembl	74_37	+1	known	silent	c.771	p.H257	0.000	NULL	NULL	-	no_errors	CCDC176	HGNC	ENSG00000119636				89	0	0	71	10	12.3457
LTBP2	0	genome.wustl.edu	37	14	74995349	74995349	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	74995349	74995349	G	A	SNP	LTBP2	ENST00000261978	human	ensembl	74_37	-1	known	silent	c.2205	p.S735	1.000	superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP2	HGNC	ENSG00000119681				81	0	0	44	20	31.25
YLPM1	0	genome.wustl.edu	37	14	75265268	75265268	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	75265268	75265268	C	T	SNP	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	missense	c.3268	p.R1090W	0.960	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596				69	0	0	68	23	25.2747
TMED10	0	genome.wustl.edu	37	14	75643173	75643173	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	75643173	75643173	G	A	SNP	TMED10	ENST00000303575	human	ensembl	74_37	-1	known	missense	c.110	p.P37L	1.000	pfam_GOLD	pfam_GOLD,pfscan_GOLD	-	no_errors	TMED10	HGNC	ENSG00000170348				124	0	0	63	16	20.2532
NRXN3	0	genome.wustl.edu	37	14	80328296	80328296	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	80328296	80328296	T	C	SNP	NRXN3	ENST00000335750	human	ensembl	74_37	+1	known	missense	c.3175	p.Y1059H	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				38	0	0	27	9	25
TSHR	0	genome.wustl.edu	37	14	81610228	81610228	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	81610228	81610228	G	A	SNP	TSHR	ENST00000298171	human	ensembl	74_37	+1	known	missense	c.1826	p.R609Q	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_TSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_FSH_rcpt,prints_LSH_rcpt	-	no_errors	TSHR	HGNC	ENSG00000165409				446	1	0.223714	351	88	20.0456
FLRT2	0	genome.wustl.edu	37	14	86088134	86088134	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	86088134	86088134	G	A	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	silent	c.276	p.T92	0.048	NULL	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070				247	0	0	166	51	23.5023
KCNK10	0	genome.wustl.edu	37	14	88652183	88652183	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	88652183	88652183	G	A	SNP	KCNK10	ENST00000312350	human	ensembl	74_37	-1	known	missense	c.1328	p.A443V	0.981	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl_TREK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TRAAK,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK10	HGNC	ENSG00000100433				129	0	0	117	36	23.5294
PTPN21	0	genome.wustl.edu	37	14	88945665	88945665	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	88945665	88945665	C	A	SNP	PTPN21	ENST00000328736	human	ensembl	74_37	-1	known	missense	c.2110	p.A704S	1.000	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN21	HGNC	ENSG00000070778				53	0	0	48	9	15.7895
TDP1	0	genome.wustl.edu	37	14	90429630	90429630	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	90429630	90429630	A	G	SNP	TDP1	ENST00000335725	human	ensembl	74_37	+1	known	missense	c.172	p.R58G	0.969	NULL	pfam_Tyr-DNA_phospho	-	no_errors	TDP1	HGNC	ENSG00000042088				164	1	0.606061	120	41	25.4658
DICER1	0	genome.wustl.edu	37	14	95583999	95583999	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	95583999	95583999	C	T	SNP	DICER1	ENST00000343455	human	ensembl	74_37	-1	known	missense	c.1469	p.R490H	1.000	superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_RNase_III_dom,pfam_PAZ_dom,pfam_Dicer_dimerisation_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,superfamily_RNase_III_dom,superfamily_P-loop_NTPase,superfamily_PAZ_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_PAZ_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_PAZ_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DICER1	HGNC	ENSG00000100697				207	0	0	149	44	22.7979
SYNE3	0	genome.wustl.edu	37	14	95912388	95912388	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	95912388	95912388	G	A	SNP	SYNE3	ENST00000334258	human	ensembl	74_37	-1	known	missense	c.1490	p.T497M	0.104	NULL	pfam_KASH,pfam_Spectrin_repeat,superfamily_Retrov_capsid_C,smart_Spectrin/alpha-actinin,pfscan_KASH	-	no_errors	SYNE3	HGNC	ENSG00000176438				194	0	0	161	40	19.9005
BCL11B	0	genome.wustl.edu	37	14	99723922	99723922	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	99723922	99723922	C	T	SNP	BCL11B	ENST00000357195	human	ensembl	74_37	-1	known	missense	c.313	p.E105K	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11B	HGNC	ENSG00000127152				103	0	0	85	25	22.7273
LRRK1	0	genome.wustl.edu	37	15	101569367	101569367	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	101569367	101569367	C	T	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	nonsense	c.2893	p.Q965*	0.289	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237				69	0	0	45	14	23.7288
LRRK1	0	genome.wustl.edu	37	15	101606891	101606891	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	101606891	101606891	G	A	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	missense	c.5815	p.A1939T	0.001	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237				317	0	0	234	61	20.678
SNRPA1	0	genome.wustl.edu	37	15	101821975	101821975	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	101821975	101821975	T	C	SNP	SNRPA1	ENST00000254193	human	ensembl	74_37	-1	known	missense	c.722	p.D241G	0.999	NULL	smart_U2A'_phosphoprotein32A_C	-	no_errors	SNRPA1	HGNC	ENSG00000131876				90	0	0	78	17	17.8947
DNM1P47	0	genome.wustl.edu	37	15	102304770	102304770	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	102304770	102304770	C	T	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660				20	0	0	12	3	20
DNM1P47	0	genome.wustl.edu	37	15	102304869	102304869	+	RNA	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	102304869	102304869	T	C	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660				18	0	0	16	5	23.8095
HERC2P3	0	genome.wustl.edu	37	15	20643883	20643883	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	20643883	20643883	G	A	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229				243	0	0	225	17	7.02479
NIPA2	0	genome.wustl.edu	37	15	23014510	23014510	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	23014510	23014510	G	C	SNP	NIPA2	ENST00000337451	human	ensembl	74_37	-1	known	missense	c.215	p.A72G	1.000	pfam_Mg_trans_NIPA,pfam_DMT	pfam_Mg_trans_NIPA,pfam_DMT	-	no_errors	NIPA2	HGNC	ENSG00000140157				24	0	0	15	5	25
MAGEL2	0	genome.wustl.edu	37	15	23890346	23890346	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	23890346	23890346	C	T	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	silent	c.735	p.S245	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585				108	0	0	90	22	19.6429
SNORD116-20	0	genome.wustl.edu	37	15	25332944	25332944	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	25332944	25332944	C	T	SNP	SNORD116-20	ENST00000567527	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD116-20	HGNC	ENSG00000261069				162	0	0	120	32	21.0526
SNHG14	0	genome.wustl.edu	37	15	25453173	25453173	+	RNA	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	25453173	25453173	T	C	SNP	SNHG14	ENST00000424333	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				153	0	0	102	34	25
SNHG14	0	genome.wustl.edu	37	15	25458718	25458718	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	25458718	25458718	G	A	SNP	SNHG14	ENST00000424208	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				58	0	0	57	18	24
HERC2	0	genome.wustl.edu	37	15	28408251	28408251	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	28408251	28408251	C	T	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.10735	p.A3579T	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				77	0	0	58	35	37.6344
TJP1	0	genome.wustl.edu	37	15	30011319	30011319	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	30011319	30011319	G	A	SNP	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	silent	c.3027	p.P1009	0.581	NULL	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067				255	1	0.390625	192	70	26.7176
RYR3	0	genome.wustl.edu	37	15	33831643	33831643	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	33831643	33831643	G	A	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.526	p.V176M	1.000	pfam_Ins145_P3_rcpt,superfamily_MIR_motif,smart_MIR_motif,prints_Ryan_recept,pfscan_MIR_motif	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				32	0	0	11	3	21.4286
RYR3	0	genome.wustl.edu	37	15	33988594	33988594	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	33988594	33988594	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	silent	c.6036	p.S2012	0.997	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				120	0	0	68	23	25.2747
RYR3	0	genome.wustl.edu	37	15	34145782	34145782	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	34145782	34145782	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	silent	c.13698	p.Y4566	0.861	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				79	0	0	53	16	23.1884
KATNBL1	0	genome.wustl.edu	37	15	34445071	34445071	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	34445071	34445071	T	C	SNP	KATNBL1	ENST00000256544	human	ensembl	74_37	-1	known	missense	c.358	p.T120A	0.793	NULL	NULL	-	no_errors	KATNBL1	HGNC	ENSG00000134152				193	0	0	186	10	5.10204
SLC12A6	0	genome.wustl.edu	37	15	34531353	34531353	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	34531353	34531353	C	T	SNP	SLC12A6	ENST00000558589	human	ensembl	74_37	-1	known	silent	c.2418	p.K806	1.000	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A6	HGNC	ENSG00000140199				216	1	0.460829	189	53	21.9008
MEIS2	0	genome.wustl.edu	37	15	37187361	37187361	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	37187361	37187361	G	A	SNP	MEIS2	ENST00000561208	human	ensembl	74_37	-1	known	missense	c.1138	p.R380W	1.000	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	MEIS2	HGNC	ENSG00000134138				125	0	0	65	19	22.619
THBS1	0	genome.wustl.edu	37	15	39875834	39875834	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	39875834	39875834	T	C	SNP	THBS1	ENST00000260356	human	ensembl	74_37	+1	known	missense	c.644	p.V215A	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801				146	1	0.680272	105	29	21.6418
FSIP1	0	genome.wustl.edu	37	15	40018788	40018788	+	Splice_Site	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	40018788	40018788	A	G	SNP	FSIP1	ENST00000350221	human	ensembl	74_37	-1	known	splice_site	c.1050+2	e8+2	0.897	-	-	-	no_errors	FSIP1	HGNC	ENSG00000150667				120	0	0	87	16	15.534
KNSTRN	0	genome.wustl.edu	37	15	40683717	40683717	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	40683717	40683717	T	G	SNP	KNSTRN	ENST00000249776	human	ensembl	74_37	+1	known	missense	c.709	p.S237A	0.000	NULL	NULL	-	no_errors	KNSTRN	HGNC	ENSG00000128944				136	0	0	82	24	22.6415
CHAC1	0	genome.wustl.edu	37	15	41247781	41247781	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	41247781	41247781	G	A	SNP	CHAC1	ENST00000446533	human	ensembl	74_37	+1	known	missense	c.604	p.A202T	1.000	pfam_ChaC	pfam_ChaC	-	no_errors	CHAC1	HGNC	ENSG00000128965				211	1	0.471698	140	38	21.3483
DUOX2	0	genome.wustl.edu	37	15	45386840	45386840	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	45386840	45386840	G	A	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	missense	c.4445	p.T1482M	1.000	pfam_Fe_red_NAD-bd_6	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279				28	0	0	22	9	29.0323
DUOX1	0	genome.wustl.edu	37	15	45444515	45444515	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	45444515	45444515	C	T	SNP	DUOX1	ENST00000321429	human	ensembl	74_37	+1	known	silent	c.3225	p.I1075	1.000	NULL	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX1	HGNC	ENSG00000137857				52	0	0	35	11	23.913
MYEF2	0	genome.wustl.edu	37	15	48459562	48459562	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	48459562	48459562	G	A	SNP	MYEF2	ENST00000324324	human	ensembl	74_37	-1	known	missense	c.407	p.A136V	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MYEF2	HGNC	ENSG00000104177				121	0	0	92	25	21.3675
SECISBP2L	0	genome.wustl.edu	37	15	49304949	49304949	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	49304949	49304949	G	A	SNP	SECISBP2L	ENST00000559471	human	ensembl	74_37	-1	known	missense	c.1627	p.P543S	1.000	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2L	HGNC	ENSG00000138593				205	0	0	143	37	20.5556
GALK2	0	genome.wustl.edu	37	15	49493385	49493385	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	49493385	49493385	A	G	SNP	GALK2	ENST00000560031	human	ensembl	74_37	+1	known	missense	c.80	p.N27S	0.954	pfam_GalKase_gal-bd,superfamily_Ribosomal_S5_D2-typ_fold,pirsf_Galactokinase,tigrfam_Galactokinase	pfam_GalKase_gal-bd,pfam_GHMP_kinase_N_dom,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,pirsf_Galactokinase,prints_Mevalonate/galactokinase,prints_Galactokinase,tigrfam_Galactokinase	-	no_errors	GALK2	HGNC	ENSG00000156958				80	0	0	62	12	16.2162
ATP8B4	0	genome.wustl.edu	37	15	50215592	50215592	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	50215592	50215592	G	A	SNP	ATP8B4	ENST00000284509	human	ensembl	74_37	-1	known	missense	c.1742	p.T581M	0.981	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B4	HGNC	ENSG00000104043				115	0	0	84	21	20
TMOD3	0	genome.wustl.edu	37	15	52194210	52194210	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	52194210	52194210	C	T	SNP	TMOD3	ENST00000308580	human	ensembl	74_37	+1	known	missense	c.1001	p.A334V	1.000	NULL	pfam_Tropomodulin	-	no_errors	TMOD3	HGNC	ENSG00000138594				97	0	0	73	20	21.5054
MYO5A	0	genome.wustl.edu	37	15	52662454	52662454	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	52662454	52662454	G	A	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	missense	c.2978	p.A993V	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535				199	0	0	159	50	23.9234
WDR72	0	genome.wustl.edu	37	15	53907708	53907708	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	53907708	53907708	C	G	SNP	WDR72	ENST00000360509	human	ensembl	74_37	-1	known	missense	c.2695	p.D899H	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415				114	0	0	80	22	21.5686
UNC13C	0	genome.wustl.edu	37	15	54307652	54307652	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	54307652	54307652	A	G	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	missense	c.2552	p.D851G	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766				106	0	0	97	22	18.4874
RFX7	0	genome.wustl.edu	37	15	56388135	56388135	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	56388135	56388135	G	A	SNP	RFX7	ENST00000423270	human	ensembl	74_37	-1	known	silent	c.1791	p.D597	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX7	HGNC	ENSG00000181827				69	0	0	49	16	24.6154
ALDH1A2	0	genome.wustl.edu	37	15	58287284	58287284	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	58287284	58287284	T	A	SNP	ALDH1A2	ENST00000249750	human	ensembl	74_37	-1	known	missense	c.547	p.I183F	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A2	HGNC	ENSG00000128918				214	0	0	177	62	25.9414
TLN2	0	genome.wustl.edu	37	15	62978963	62978963	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	62978963	62978963	C	T	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	missense	c.1081	p.R361C	1.000	pfam_Insln_rcpt_S1,pfscan_FERM_domain	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914				62	0	0	42	10	19.2308
TLN2	0	genome.wustl.edu	37	15	63004122	63004122	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	63004122	63004122	G	A	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	missense	c.2480	p.R827H	1.000	NULL	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914				78	0	0	59	17	22.3684
HERC1	0	genome.wustl.edu	37	15	63990925	63990925	+	Splice_Site	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	63990925	63990925	A	G	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	splice_site	c.4905+2	e25+2	1.000	-	-	-	no_errors	HERC1	HGNC	ENSG00000103657				46	0	0	39	9	18.75
TRIP4	0	genome.wustl.edu	37	15	64717782	64717782	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	64717782	64717782	C	T	SNP	TRIP4	ENST00000261884	human	ensembl	74_37	+1	known	silent	c.1527	p.G509	0.998	pfam_ASCH_domain,superfamily_PUA-like_domain	pfam_ASCH_domain,pfam_Znf_C2HC5,superfamily_PUA-like_domain	-	no_errors	TRIP4	HGNC	ENSG00000103671				238	0	0	160	47	22.7053
CILP	0	genome.wustl.edu	37	15	65491212	65491212	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	65491212	65491212	G	A	SNP	CILP	ENST00000261883	human	ensembl	74_37	-1	known	missense	c.1412	p.T471M	0.998	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP	HGNC	ENSG00000138615				58	0	0	52	9	14.7541
IGDCC4	0	genome.wustl.edu	37	15	65702545	65702545	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	65702545	65702545	C	A	SNP	IGDCC4	ENST00000352385	human	ensembl	74_37	-1	novel	missense	c.534	p.K178N	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGDCC4	HGNC	ENSG00000103742				110	1	0.900901	81	16	16.4948
DENND4A	0	genome.wustl.edu	37	15	66048497	66048497	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	66048497	66048497	G	A	SNP	DENND4A	ENST00000443035	human	ensembl	74_37	-1	known	missense	c.292	p.P98S	1.000	pfscan_uDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,tigrfam_Pentatricopeptide_repeat	-	no_errors	DENND4A	HGNC	ENSG00000174485				36	0	0	33	9	21.4286
MAP2K1	0	genome.wustl.edu	37	15	66737006	66737006	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	66737006	66737006	C	A	SNP	MAP2K1	ENST00000307102	human	ensembl	74_37	+1	known	missense	c.529	p.L177M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP2K1	HGNC	ENSG00000169032				193	0	0	122	38	23.75
FEM1B	0	genome.wustl.edu	37	15	68583129	68583129	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	68583129	68583129	A	T	SNP	FEM1B	ENST00000306917	human	ensembl	74_37	+1	known	missense	c.1433	p.D478V	1.000	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	FEM1B	HGNC	ENSG00000169018				293	0	0	231	63	21.4286
TLE3	0	genome.wustl.edu	37	15	70345628	70345628	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	70345628	70345628	T	G	SNP	TLE3	ENST00000558939	human	ensembl	74_37	-1	known	missense	c.1921	p.T641P	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE3	HGNC	ENSG00000140332				11	0	0	4	4	50
THSD4	0	genome.wustl.edu	37	15	72039263	72039263	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	72039263	72039263	C	T	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	missense	c.2123	p.A708V	1.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720				38	0	0	33	13	28.2609
STRA6	0	genome.wustl.edu	37	15	74490099	74490099	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	74490099	74490099	C	T	SNP	STRA6	ENST00000563965	human	ensembl	74_37	-1	known	silent	c.291	p.S97	0.181	NULL	NULL	-	no_errors	STRA6	HGNC	ENSG00000137868				51	0	0	44	18	29.0323
CCDC33	0	genome.wustl.edu	37	15	74536466	74536466	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	74536466	74536466	C	T	SNP	CCDC33	ENST00000321288	human	ensembl	74_37	+1	known	silent	c.771	p.S257	0.055	pfam_C2_dom,superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom	-	no_errors	CCDC33	HGNC	ENSG00000140481				90	0	0	65	20	23.5294
CYP1A2	0	genome.wustl.edu	37	15	75042486	75042486	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	75042486	75042486	G	A	SNP	CYP1A2	ENST00000343932	human	ensembl	74_37	+1	known	missense	c.407	p.R136H	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP1,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP1A2	HGNC	ENSG00000140505				191	1	0.520833	157	48	23.4146
CYP1A2	0	genome.wustl.edu	37	15	75047412	75047412	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	75047412	75047412	C	T	SNP	CYP1A2	ENST00000343932	human	ensembl	74_37	+1	known	missense	c.1534	p.R512C	0.871	superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP1,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP1A2	HGNC	ENSG00000140505				49	0	0	32	9	21.9512
SCAMP5	0	genome.wustl.edu	37	15	75308975	75308975	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	75308975	75308975	G	A	SNP	SCAMP5	ENST00000562212	human	ensembl	74_37	+1	known	missense	c.178	p.A60T	1.000	pfam_SCAMP	pfam_SCAMP	-	no_errors	SCAMP5	HGNC	ENSG00000198794				102	0	0	60	25	29.4118
CSPG4	0	genome.wustl.edu	37	15	75968067	75968067	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	75968067	75968067	G	A	SNP	CSPG4	ENST00000308508	human	ensembl	74_37	-1	known	missense	c.6793	p.R2265C	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	-	no_errors	CSPG4	HGNC	ENSG00000173546				95	0	0	78	23	22.7723
CSPG4	0	genome.wustl.edu	37	15	75981657	75981657	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	75981657	75981657	C	T	SNP	CSPG4	ENST00000308508	human	ensembl	74_37	-1	known	silent	c.1749	p.P583	0.001	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	-	no_errors	CSPG4	HGNC	ENSG00000173546				45	0	0	39	13	25
PEAK1	0	genome.wustl.edu	37	15	77426055	77426055	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	77426055	77426055	T	C	SNP	PEAK1	ENST00000312493	human	ensembl	74_37	-1	known	silent	c.3369	p.P1123	0.564	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	PEAK1	HGNC	ENSG00000173517				161	0	0	92	30	24.5902
CHRNA3	0	genome.wustl.edu	37	15	78894011	78894011	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	78894011	78894011	C	T	SNP	CHRNA3	ENST00000326828	human	ensembl	74_37	-1	known	missense	c.973	p.V325M	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA3	HGNC	ENSG00000080644				213	0	0	168	45	21.1268
ADAMTS7	0	genome.wustl.edu	37	15	79063957	79063957	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	79063957	79063957	C	T	SNP	ADAMTS7	ENST00000388820	human	ensembl	74_37	-1	known	silent	c.2346	p.P782	0.116	pfam_ADAM_spacer1	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378				30	0	0	19	5	20.8333
ABHD17C	0	genome.wustl.edu	37	15	81041945	81041945	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	81041945	81041945	G	A	SNP	ABHD17C	ENST00000258884	human	ensembl	74_37	+1	known	missense	c.682	p.A228T	1.000	pfam_Peptidase_S9,pfam_Dienelactn_hydro	pfam_Peptidase_S9,pfam_Dienelactn_hydro	-	no_errors	ABHD17C	HGNC	ENSG00000136379				120	0	0	84	27	24.3243
TMC3	0	genome.wustl.edu	37	15	81666342	81666342	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	81666342	81666342	G	A	SNP	TMC3	ENST00000359440	human	ensembl	74_37	-1	known	missense	c.77	p.S26F	1.000	NULL	pfam_TMC	-	no_errors	TMC3	HGNC	ENSG00000188869				39	0	0	36	11	23.4043
FAM154B	0	genome.wustl.edu	37	15	82564031	82564031	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	82564031	82564031	T	C	SNP	FAM154B	ENST00000339465	human	ensembl	74_37	+1	known	silent	c.141	p.G47	0.156	NULL	NULL	-	no_errors	FAM154B	HGNC	ENSG00000188659				105	0	0	87	9	9.375
ADAMTSL3	0	genome.wustl.edu	37	15	84651204	84651204	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	84651204	84651204	T	C	SNP	ADAMTSL3	ENST00000286744	human	ensembl	74_37	+1	known	missense	c.2824	p.S942P	0.916	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218				164	0	0	103	35	25.3623
ALPK3	0	genome.wustl.edu	37	15	85383249	85383249	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	85383249	85383249	C	T	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	silent	c.1345	p.L449	0.006	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383				48	0	0	24	11	31.4286
NTRK3	0	genome.wustl.edu	37	15	88680684	88680684	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	88680684	88680684	G	A	SNP	NTRK3	ENST00000360948	human	ensembl	74_37	-1	known	silent	c.573	p.N191	0.000	smart_Cys-rich_flank_reg_C	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Kinase-like_dom,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Tyr_kinase_NGF_rcpt,prints_Tyr_kin_neurotrophic_rcpt_3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NTRK3	HGNC	ENSG00000140538				68	0	0	55	19	25.6757
C15orf38-AP3S2	0	genome.wustl.edu	37	15	90451554	90451554	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	90451554	90451554	C	T	SNP	C15orf38-AP3S2	ENST00000398333	human	ensembl	74_37	-1	known	missense	c.259	p.A87T	1.000	pfam_UPF0552	pfam_UPF0552,pfam_AP_mu_sigma_su,superfamily_Longin-like_dom	-	no_errors	C15orf38-AP3S2	HGNC	ENSG00000250021				79	0	0	77	26	25.2427
TTLL13	0	genome.wustl.edu	37	15	90799471	90799471	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	90799471	90799471	G	A	SNP	TTLL13	ENST00000438251	human	ensembl	74_37	+1	known	missense	c.647	p.R216Q	0.930	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL13	HGNC	ENSG00000213471				115	0	0	77	26	25.2427
TTLL13	0	genome.wustl.edu	37	15	90800412	90800412	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	90800412	90800412	G	A	SNP	TTLL13	ENST00000438251	human	ensembl	74_37	+1	known	missense	c.748	p.V250I	1.000	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL13	HGNC	ENSG00000213471				121	0	0	97	30	23.622
CHD2	0	genome.wustl.edu	37	15	93489428	93489428	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	93489428	93489428	C	T	SNP	CHD2	ENST00000420239	human	ensembl	74_37	+1	known	silent	c.1359	p.I453	1.000	pfscan_Chromo_domain/shadow	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575				95	0	0	85	25	22.7273
RGMA	0	genome.wustl.edu	37	15	93595502	93595502	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	93595502	93595502	C	T	SNP	RGMA	ENST00000329082	human	ensembl	74_37	-1	known	silent	c.366	p.S122	0.882	pfam_RGM_N	pfam_RGM_N,pfam_RGM_C	-	no_errors	RGMA	HGNC	ENSG00000182175				56	0	0	34	14	29.1667
PGPEP1L	0	genome.wustl.edu	37	15	99511846	99511846	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	99511846	99511846	G	A	SNP	PGPEP1L	ENST00000378919	human	ensembl	74_37	-1	known	missense	c.452	p.S151L	0.325	superfamily_Peptidase_C15-like	pfam_Peptidase_C15,superfamily_Peptidase_C15-like	-	no_errors	PGPEP1L	HGNC	ENSG00000183571				16	0	0	15	5	25
TPSD1	0	genome.wustl.edu	37	16	1306669	1306669	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	1306669	1306669	G	A	SNP	TPSD1	ENST00000211076	human	ensembl	74_37	+1	known	missense	c.235	p.A79T	0.991	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	TPSD1	HGNC	ENSG00000095917				77	0	0	58	21	26.5823
TSR3	0	genome.wustl.edu	37	16	1400145	1400145	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	1400145	1400145	G	A	SNP	TSR3	ENST00000007390	human	ensembl	74_37	-1	known	missense	c.617	p.A206V	0.945	pfam_DUF367	pfam_DUF367,pfam_RNaseL-inhib_metal-bd_dom	-	no_errors	TSR3	HGNC	ENSG00000007520				29	0	0	19	2	9.52381
BFAR	0	genome.wustl.edu	37	16	14743706	14743706	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	14743706	14743706	G	A	SNP	BFAR	ENST00000261658	human	ensembl	74_37	+1	known	missense	c.514	p.D172N	0.991	NULL	pfam_SAM_type1,pfam_Znf_C3HC4_RING-type,pfam_SAM_2,superfamily_SAM/pointed,smart_Znf_RING,smart_SAM,pfscan_SAM,pfscan_Znf_RING	-	no_errors	BFAR	HGNC	ENSG00000103429				101	0	0	67	21	23.8636
MYH11	0	genome.wustl.edu	37	16	15811163	15811163	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	15811163	15811163	C	T	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	missense	c.5359	p.A1787T	0.944	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392				117	0	0	88	17	16.1905
MYH11	0	genome.wustl.edu	37	16	15814829	15814829	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	15814829	15814829	T	C	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	missense	c.4679	p.D1560G	0.999	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392				117	1	0.847458	74	24	24.4898
MYH11	0	genome.wustl.edu	37	16	15853542	15853542	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	15853542	15853542	C	T	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	missense	c.1313	p.R438H	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392				111	0	0	89	35	28.2258
ABCC6	0	genome.wustl.edu	37	16	16267261	16267261	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	16267261	16267261	C	T	SNP	ABCC6	ENST00000456970	human	ensembl	74_37	-1	known	missense	c.2492	p.G831D	0.742	smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC6	HGNC	ENSG00000091262				230	0	0	144	40	21.7391
CRAMP1L	0	genome.wustl.edu	37	16	1712579	1712579	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	1712579	1712579	G	A	SNP	CRAMP1L	ENST00000293925	human	ensembl	74_37	+1	known	silent	c.2502	p.P834	0.240	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	CRAMP1L	HGNC	ENSG00000007545				151	0	0	97	36	27.0677
XYLT1	0	genome.wustl.edu	37	16	17202689	17202689	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	17202689	17202689	T	C	SNP	XYLT1	ENST00000261381	human	ensembl	74_37	-1	known	missense	c.2743	p.T915A	0.989	NULL	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT1	HGNC	ENSG00000103489				58	0	0	34	5	12.8205
EME2	0	genome.wustl.edu	37	16	1824335	1824335	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	1824335	1824335	C	T	SNP	EME2	ENST00000307394	human	ensembl	74_37	+1	known	silent	c.459	p.G153	0.103	pfam_ERCC4_domain,smart_ERCC4_domain	pfam_ERCC4_domain,smart_ERCC4_domain	-	no_errors	EME2	HGNC	ENSG00000197774				72	0	0	63	11	14.8649
SPSB3	0	genome.wustl.edu	37	16	1827312	1827312	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	1827312	1827312	A	C	SNP	SPSB3	ENST00000301717	human	ensembl	74_37	-1	known	missense	c.854	p.L285R	1.000	superfamily_ConA-like_lec_gl_sf,smart_SOCS_C,pfscan_SOCS_C	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_SOCS_C,pfscan_B30.2/SPRY,pfscan_SOCS_C	-	no_errors	SPSB3	HGNC	ENSG00000162032				53	0	0	28	8	22.2222
SYT17	0	genome.wustl.edu	37	16	19278340	19278340	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	19278340	19278340	G	A	SNP	SYT17	ENST00000355377	human	ensembl	74_37	+1	known	missense	c.1367	p.S456N	1.000	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT17	HGNC	ENSG00000103528				50	0	0	38	18	32.1429
PDILT	0	genome.wustl.edu	37	16	20380924	20380924	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	20380924	20380924	C	T	SNP	PDILT	ENST00000302451	human	ensembl	74_37	-1	known	missense	c.1006	p.V336I	0.745	superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	PDILT	HGNC	ENSG00000169340				280	0	0	182	59	24.4813
UQCRC2	0	genome.wustl.edu	37	16	21983256	21983256	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	21983256	21983256	A	T	SNP	UQCRC2	ENST00000268379	human	ensembl	74_37	+1	known	missense	c.779	p.E260V	0.939	pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	UQCRC2	HGNC	ENSG00000140740				125	0	0	92	19	17.1171
MLST8	0	genome.wustl.edu	37	16	2258729	2258729	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	2258729	2258729	G	A	SNP	MLST8	ENST00000301724	human	ensembl	74_37	+1	putative	missense	c.977	p.R326H	0.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MLST8	HGNC	ENSG00000167965				183	0	0	124	39	23.9264
USP31	0	genome.wustl.edu	37	16	23091276	23091276	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	23091276	23091276	G	A	SNP	USP31	ENST00000219689	human	ensembl	74_37	-1	known	missense	c.2167	p.H723Y	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP31	HGNC	ENSG00000103404				84	0	0	46	18	28.125
USP31	0	genome.wustl.edu	37	16	23096246	23096246	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	23096246	23096246	G	T	SNP	USP31	ENST00000219689	human	ensembl	74_37	-1	known	missense	c.1765	p.R589S	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP31	HGNC	ENSG00000103404				504	0	0	419	88	17.357
PALB2	0	genome.wustl.edu	37	16	23614847	23614847	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	23614847	23614847	G	A	SNP	PALB2	ENST00000261584	human	ensembl	74_37	-1	known	missense	c.3494	p.S1165L	0.994	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom	-	no_errors	PALB2	HGNC	ENSG00000083093				172	0	0	127	42	24.8521
AMDHD2	0	genome.wustl.edu	37	16	2577818	2577818	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	2577818	2577818	G	A	SNP	AMDHD2	ENST00000413459	human	ensembl	74_37	+1	known	missense	c.460	p.A154T	1.000	superfamily_Metal-dep_hydrolase_composite	pfam_Amidohydro_1,pfam_Amidohydro_3,superfamily_Metal-dep_hydrolase_composite	-	no_errors	AMDHD2	HGNC	ENSG00000162066				21	0	0	5	5	50
GTF3C1	0	genome.wustl.edu	37	16	27539991	27539991	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	27539991	27539991	C	T	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	missense	c.901	p.G301R	0.871	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235				232	0	0	146	50	25.5102
KIAA0556	0	genome.wustl.edu	37	16	27784524	27784524	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	27784524	27784524	G	A	SNP	KIAA0556	ENST00000261588	human	ensembl	74_37	+1	known	missense	c.4303	p.E1435K	0.999	NULL	superfamily_Thaumatin	-	no_errors	KIAA0556	HGNC	ENSG00000047578				33	0	0	30	3	9.09091
SRRM2	0	genome.wustl.edu	37	16	2810378	2810378	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	2810378	2810378	G	A	SNP	SRRM2	ENST00000301740	human	ensembl	74_37	+1	known	missense	c.910	p.G304R	0.979	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM2	HGNC	ENSG00000167978				55	0	0	36	7	16.2791
XPO6	0	genome.wustl.edu	37	16	28117503	28117503	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	28117503	28117503	C	T	SNP	XPO6	ENST00000304658	human	ensembl	74_37	-1	known	missense	c.2645	p.G882D	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO6	HGNC	ENSG00000169180				100	0	0	94	6	6
APOBR	0	genome.wustl.edu	37	16	28509138	28509138	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	28509138	28509138	G	A	SNP	APOBR	ENST00000564831	human	ensembl	74_37	+1	known	missense	c.2776	p.G926R	0.000	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730				18	0	0	12	5	29.4118
IL27	0	genome.wustl.edu	37	16	28511129	28511129	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	28511129	28511129	G	A	SNP	IL27	ENST00000356897	human	ensembl	74_37	-1	known	missense	c.575	p.P192L	0.001	superfamily_4_helix_cytokine-like_core	superfamily_4_helix_cytokine-like_core	-	no_errors	IL27	HGNC	ENSG00000197272				11	0	0	3	3	50
ATP2A1	0	genome.wustl.edu	37	16	28906263	28906263	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	28906263	28906263	G	A	SNP	ATP2A1	ENST00000357084	human	ensembl	74_37	+1	known	missense	c.1408	p.A470T	0.999	superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A1	HGNC	ENSG00000196296				64	0	0	55	13	19.1176
LOC101928215	0	genome.wustl.edu	37	16	29115246	29115246	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	29115246	29115246	G	A	SNP	LOC101928215	ENST00000562618	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTB-134H23.3	Clone_based_vega_gene	ENSG00000260908				16	0	0	8	4	33.3333
PAGR1	0	genome.wustl.edu	37	16	29828545	29828545	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	29828545	29828545	C	T	SNP	PAGR1	ENST00000609618	human	ensembl	74_37	+1	known	missense	c.497	p.T166M	1.000	NULL	NULL	-	no_errors	PAGR1	Uniprot_gn	ENSG00000263136				60	0	0	43	14	24.5614
TAOK2	0	genome.wustl.edu	37	16	29999115	29999115	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	29999115	29999115	G	A	SNP	TAOK2	ENST00000308893	human	ensembl	74_37	+1	known	silent	c.3522	p.P1174	0.133	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK2	HGNC	ENSG00000149930				46	0	0	41	18	30.5085
GDPD3	0	genome.wustl.edu	37	16	30124065	30124065	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	30124065	30124065	G	A	SNP	GDPD3	ENST00000406256	human	ensembl	74_37	-1	known	missense	c.232	p.R78W	0.005	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD3	HGNC	ENSG00000102886				71	0	0	65	22	25.2874
PRR14	0	genome.wustl.edu	37	16	30666220	30666220	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	30666220	30666220	G	A	SNP	PRR14	ENST00000300835	human	ensembl	74_37	+1	known	missense	c.929	p.R310H	1.000	NULL	NULL	-	no_errors	PRR14	HGNC	ENSG00000156858				52	0	0	45	10	18.1818
SRCAP	0	genome.wustl.edu	37	16	30723463	30723463	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	30723463	30723463	G	A	SNP	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	silent	c.1800	p.T600	0.703	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603				129	0	0	73	32	30.4762
RNF40	0	genome.wustl.edu	37	16	30779279	30779279	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	30779279	30779279	A	G	SNP	RNF40	ENST00000324685	human	ensembl	74_37	+1	known	silent	c.1494	p.K498	1.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF40	HGNC	ENSG00000103549				168	0	0	128	31	19.4969
ZNF646	0	genome.wustl.edu	37	16	31092480	31092480	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	31092480	31092480	G	A	SNP	ZNF646	ENST00000300850	human	ensembl	74_37	+1	known	missense	c.4835	p.S1612N	0.309	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395				79	0	0	66	18	21.4286
KAT8	0	genome.wustl.edu	37	16	31138555	31138555	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	31138555	31138555	G	A	SNP	KAT8	ENST00000448516	human	ensembl	74_37	+1	known	missense	c.562	p.E188K	1.000	superfamily_Acyl_CoA_acyltransferase	pfam_MOZ_SAS,pfam_Tudor-knot,superfamily_Acyl_CoA_acyltransferase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow	-	no_errors	KAT8	HGNC	ENSG00000103510				154	0	0	108	34	23.9437
TRIM72	0	genome.wustl.edu	37	16	31232241	31232241	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	31232241	31232241	T	C	SNP	TRIM72	ENST00000322122	human	ensembl	74_37	+1	known	splice_site	c.740+2	e4+2	1.000	-	-	-	no_errors	TRIM72	HGNC	ENSG00000177238				140	1	0.70922	125	34	21.3836
ITGAM	0	genome.wustl.edu	37	16	31283278	31283278	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	31283278	31283278	G	T	SNP	ITGAM	ENST00000544665	human	ensembl	74_37	+1	known	silent	c.669	p.G223	0.010	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAM	HGNC	ENSG00000169896				145	1	0.684932	89	18	16.8224
ITGAM	0	genome.wustl.edu	37	16	31284825	31284825	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	31284825	31284825	C	T	SNP	ITGAM	ENST00000544665	human	ensembl	74_37	+1	known	missense	c.844	p.R282C	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAM	HGNC	ENSG00000169896				94	0	0	66	30	31.25
ZSCAN10	0	genome.wustl.edu	37	16	3140022	3140022	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	3140022	3140022	C	T	SNP	ZSCAN10	ENST00000252463	human	ensembl	74_37	-1	known	silent	c.1248	p.P416	0.000	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN10	HGNC	ENSG00000130182				14	0	0	6	5	45.4545
ARMC5	0	genome.wustl.edu	37	16	31473837	31473837	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	31473837	31473837	C	T	SNP	ARMC5	ENST00000408912	human	ensembl	74_37	+1	known	silent	c.1254	p.G418	0.335	superfamily_ARM-type_fold,smart_Armadillo	superfamily_ARM-type_fold,superfamily_BTB/POZ_fold,smart_Armadillo,pfscan_Armadillo,pfscan_BTB/POZ-like	-	no_errors	ARMC5	HGNC	ENSG00000140691				69	0	0	51	17	25
C16orf58	0	genome.wustl.edu	37	16	31510649	31510649	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	31510649	31510649	T	C	SNP	C16orf58	ENST00000327237	human	ensembl	74_37	-1	known	missense	c.574	p.T192A	0.564	pfam_RUS2/WXR1	pfam_RUS2/WXR1	-	no_errors	C16orf58	HGNC	ENSG00000140688				34	0	0	20	3	13.0435
ZNF213	0	genome.wustl.edu	37	16	3191292	3191292	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	3191292	3191292	G	A	SNP	ZNF213	ENST00000396878	human	ensembl	74_37	+1	known	missense	c.1324	p.A442T	0.990	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF213	HGNC	ENSG00000085644				65	0	0	40	10	20
ZNF267	0	genome.wustl.edu	37	16	31927586	31927586	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	31927586	31927586	G	A	SNP	ZNF267	ENST00000300870	human	ensembl	74_37	+1	known	silent	c.2016	p.R672	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF267	HGNC	ENSG00000185947				151	0	0	90	27	23.0769
AXIN1	0	genome.wustl.edu	37	16	338227	338227	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	338227	338227	G	A	SNP	AXIN1	ENST00000262320	human	ensembl	74_37	-1	known	silent	c.2484	p.S828	0.997	pfam_DIX,smart_DIX,pfscan_DIX	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN1	HGNC	ENSG00000103126				137	1	0.724638	100	40	28.5714
MRPL28	0	genome.wustl.edu	37	16	418565	418565	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	418565	418565	C	T	SNP	MRPL28	ENST00000199706	human	ensembl	74_37	-1	known	missense	c.512	p.R171Q	0.998	NULL	NULL	-	no_errors	MRPL28	HGNC	ENSG00000086504				67	0	0	51	12	19.0476
CORO7-PAM16	0	genome.wustl.edu	37	16	4463375	4463375	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	4463375	4463375	C	T	SNP	CORO7-PAM16	ENST00000572467	human	ensembl	74_37	-1	known	missense	c.91	p.A31T	0.000	NULL	pfam_DUF1900,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO7-PAM16	HGNC	ENSG00000103426				20	0	0	8	3	27.2727
VPS35	0	genome.wustl.edu	37	16	46714715	46714715	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	46714715	46714715	G	T	SNP	VPS35	ENST00000299138	human	ensembl	74_37	-1	known	missense	c.374	p.S125Y	1.000	pfam_VPS35	pfam_VPS35,superfamily_ARM-type_fold	-	no_errors	VPS35	HGNC	ENSG00000069329				162	0	0	108	31	22.3022
N4BP1	0	genome.wustl.edu	37	16	48594921	48594921	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	48594921	48594921	G	A	SNP	N4BP1	ENST00000262384	human	ensembl	74_37	-1	known	missense	c.1633	p.R545C	0.026	NULL	pfam_RNase_Zc3h12	-	no_errors	N4BP1	HGNC	ENSG00000102921				235	0	0	169	41	19.5238
PPL	0	genome.wustl.edu	37	16	4950862	4950862	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	4950862	4950862	C	A	SNP	PPL	ENST00000345988	human	ensembl	74_37	-1	known	missense	c.575	p.S192I	0.912	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898				267	1	0.373134	248	27	9.81818
ZNF423	0	genome.wustl.edu	37	16	49670430	49670430	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	49670430	49670430	T	C	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	missense	c.2633	p.D878G	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935				118	0	0	79	20	20.202
CES5A	0	genome.wustl.edu	37	16	55903594	55903594	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	55903594	55903594	G	A	SNP	CES5A	ENST00000521992	human	ensembl	74_37	-1	known	silent	c.567	p.S189	0.861	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES5A	HGNC	ENSG00000159398				40	0	0	38	15	28.3019
NLRC5	0	genome.wustl.edu	37	16	57060576	57060576	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	57060576	57060576	G	A	SNP	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	missense	c.1721	p.R574H	0.007	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853				112	0	0	79	19	19.3878
NLRC5	0	genome.wustl.edu	37	16	57060597	57060597	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	57060597	57060597	C	T	SNP	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	missense	c.1742	p.A581V	0.844	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853				100	0	0	93	22	19.1304
POLR2C	0	genome.wustl.edu	37	16	57503122	57503122	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	57503122	57503122	A	G	SNP	POLR2C	ENST00000219252	human	ensembl	74_37	+1	known	missense	c.304	p.T102A	1.000	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,superfamily_RBP11-like_dimer,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,superfamily_RBP11-like_dimer,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	-	no_errors	POLR2C	HGNC	ENSG00000102978				148	0	0	117	29	19.863
GPR56	0	genome.wustl.edu	37	16	57695814	57695814	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	57695814	57695814	T	A	SNP	GPR56	ENST00000379696	human	ensembl	74_37	+1	known	missense	c.1888	p.F630I	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,prints_GPCR_2_orphan_rcpt_GPR56,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR56	HGNC	ENSG00000205336				115	0	0	75	22	22.6804
CNGB1	0	genome.wustl.edu	37	16	57918222	57918222	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	57918222	57918222	G	A	SNP	CNGB1	ENST00000251102	human	ensembl	74_37	-1	known	missense	c.3602	p.P1201L	0.428	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB1	HGNC	ENSG00000070729				18	0	0	24	5	17.2414
C16orf80	0	genome.wustl.edu	37	16	58149340	58149340	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	58149340	58149340	G	A	SNP	C16orf80	ENST00000262498	human	ensembl	74_37	-1	known	missense	c.298	p.R100C	1.000	pfam_DUF667	pfam_DUF667	-	no_errors	C16orf80	HGNC	ENSG00000070761				81	0	0	46	20	30.303
PRSS54	0	genome.wustl.edu	37	16	58314269	58314269	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	58314269	58314269	C	T	SNP	PRSS54	ENST00000219301	human	ensembl	74_37	-1	known	silent	c.1047	p.A349	0.000	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	-	no_errors	PRSS54	HGNC	ENSG00000103023				129	0	0	112	25	18.2482
CA7	0	genome.wustl.edu	37	16	66881124	66881124	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	66881124	66881124	C	T	SNP	CA7	ENST00000338437	human	ensembl	74_37	+1	known	nonsense	c.232	p.R78*	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA7	HGNC	ENSG00000168748				30	0	0	22	9	29.0323
CTCF	0	genome.wustl.edu	37	16	67662409	67662409	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	67662409	67662409	C	A	SNP	CTCF	ENST00000264010	human	ensembl	74_37	+1	known	missense	c.1655	p.P552H	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCF	HGNC	ENSG00000102974				226	0	0	188	16	7.84314
EDC4	0	genome.wustl.edu	37	16	67914081	67914081	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	67914081	67914081	G	A	SNP	EDC4	ENST00000358933	human	ensembl	74_37	+1	known	missense	c.2059	p.A687T	1.000	NULL	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EDC4	HGNC	ENSG00000038358				42	0	0	36	14	28
WWP2	0	genome.wustl.edu	37	16	69942692	69942692	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	69942692	69942692	C	T	SNP	WWP2	ENST00000356003	human	ensembl	74_37	+1	known	missense	c.943	p.R315C	0.993	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	pfam_HECT,pfam_WW_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_WW_dom	-	no_errors	WWP2	HGNC	ENSG00000198373				204	0	0	145	52	26.3959
WWP2	0	genome.wustl.edu	37	16	69963368	69963368	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	69963368	69963368	G	T	SNP	WWP2	ENST00000356003	human	ensembl	74_37	+1	known	nonsense	c.1252	p.G418*	1.000	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	pfam_HECT,pfam_WW_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_WW_dom	-	no_errors	WWP2	HGNC	ENSG00000198373				76	0	0	58	20	25.641
PDPR	0	genome.wustl.edu	37	16	70172927	70172927	+	Splice_Site	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	70172927	70172927	G	A	SNP	PDPR	ENST00000288050	human	ensembl	74_37	+1	known	splice_site	c.1315+1	e9+1	1.000	-	-	-	no_errors	PDPR	HGNC	ENSG00000090857				58	0	0	49	10	16.9492
FUK	0	genome.wustl.edu	37	16	70501297	70501297	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	70501297	70501297	C	T	SNP	FUK	ENST00000378912	human	ensembl	74_37	+1	known	missense	c.601	p.R201W	1.000	pfam_Fucokinase	pfam_Fucokinase,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Trimer_LpxA-like,prints_Galkinase	-	no_errors	FUK	HGNC	ENSG00000157353				24	0	0	14	5	26.3158
PHLPP2	0	genome.wustl.edu	37	16	71690580	71690580	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	71690580	71690580	T	C	SNP	PHLPP2	ENST00000356272	human	ensembl	74_37	-1	known	missense	c.2284	p.I762V	1.000	NULL	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom	-	no_errors	PHLPP2	HGNC	ENSG00000040199				252	0	0	177	58	24.6809
RHOT2	0	genome.wustl.edu	37	16	722950	722950	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	722950	722950	C	T	SNP	RHOT2	ENST00000315082	human	ensembl	74_37	+1	known	missense	c.1550	p.T517I	0.998	pirsf_Rho_GTPase_Mt,pfam_MIRO-like,superfamily_P-loop_NTPase	pirsf_Rho_GTPase_Mt,pfam_EF_hand_assoc_2,pfam_MIRO-like,pfam_EF_hand_assoc_1,pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,pfscan_EF_hand_dom	-	no_errors	RHOT2	HGNC	ENSG00000140983				89	0	0	63	14	18.1818
ZFHX3	0	genome.wustl.edu	37	16	72992888	72992888	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	72992888	72992888	C	T	SNP	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	missense	c.1157	p.G386D	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				190	0	0	117	41	25.9494
BCAR1	0	genome.wustl.edu	37	16	75263765	75263765	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	75263765	75263765	C	T	SNP	BCAR1	ENST00000418647	human	ensembl	74_37	-1	known	missense	c.2395	p.A799T	1.000	pfam_CAS_DUF3513	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	BCAR1	HGNC	ENSG00000050820				85	0	0	54	13	19.403
CNTNAP4	0	genome.wustl.edu	37	16	76555939	76555939	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	76555939	76555939	C	T	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	missense	c.2537	p.P846L	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910				277	0	0	213	56	20.8178
PKD1L2	0	genome.wustl.edu	37	16	81249919	81249919	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	81249919	81249919	C	T	SNP	PKD1L2	ENST00000337114	human	ensembl	74_37	-1	known	missense	c.394	p.G132R	0.001	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_Lectin_gal-bd_dom,pfam_C-type_lectin,pfam_PKD/REJ-like,superfamily_C-type_lectin_fold,superfamily_Coatomer/clathrin_app_Ig-like,superfamily_PKD_dom,smart_C-type_lectin,pfscan_C-type_lectin,pfscan_Lectin_gal-bd_dom,pfscan_REJ-like	-	no_errors	PKD1L2	HGNC	ENSG00000166473				82	0	0	76	25	24.7525
PKD1L2	0	genome.wustl.edu	37	16	81253808	81253808	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	81253808	81253808	G	A	SNP	PKD1L2	ENST00000337114	human	ensembl	74_37	-1	known	silent	c.168	p.C56	0.711	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_Lectin_gal-bd_dom,pfam_C-type_lectin,pfam_PKD/REJ-like,superfamily_C-type_lectin_fold,superfamily_Coatomer/clathrin_app_Ig-like,superfamily_PKD_dom,smart_C-type_lectin,pfscan_C-type_lectin,pfscan_Lectin_gal-bd_dom,pfscan_REJ-like	-	no_errors	PKD1L2	HGNC	ENSG00000166473				145	0	0	94	35	27.1318
PLCG2	0	genome.wustl.edu	37	16	81934352	81934352	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	81934352	81934352	G	A	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	+1	known	silent	c.1329	p.S443	0.047	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pirsf_PLC-gamma,pfscan_PLipase_C_PInositol-sp_X_dom,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	-	no_errors	PLCG2	HGNC	ENSG00000197943				42	0	0	41	7	14.5833
PLCG2	0	genome.wustl.edu	37	16	81944173	81944173	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	81944173	81944173	C	T	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	+1	known	silent	c.1782	p.G594	0.466	pfam_SH2,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_SH2,pirsf_PLC-gamma,pfscan_SH2	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	-	no_errors	PLCG2	HGNC	ENSG00000197943				162	0	0	118	44	27.1605
PLCG2	0	genome.wustl.edu	37	16	81965249	81965249	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	81965249	81965249	T	A	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	+1	known	missense	c.2729	p.I910N	0.758	superfamily_PLC-like_Pdiesterase_TIM-brl,smart_Pleckstrin_homology,pirsf_PLC-gamma	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	-	no_errors	PLCG2	HGNC	ENSG00000197943				138	0	0	97	18	15.6522
RPUSD1	0	genome.wustl.edu	37	16	836152	836152	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	836152	836152	G	A	SNP	RPUSD1	ENST00000007264	human	ensembl	74_37	-1	known	missense	c.737	p.S246L	0.066	NULL	pfam_PsdUridine_synth_RsuA/RluD,superfamily_PsdUridine_synth_cat_dom	-	no_errors	RPUSD1	HGNC	ENSG00000007376				64	0	0	55	17	23.6111
MLYCD	0	genome.wustl.edu	37	16	83948976	83948976	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	83948976	83948976	G	A	SNP	MLYCD	ENST00000262430	human	ensembl	74_37	+1	known	missense	c.1364	p.R455H	1.000	pfam_Malonyl_CoA_deC	pfam_Malonyl_CoA_deC	-	no_errors	MLYCD	HGNC	ENSG00000103150				63	0	0	54	15	21.7391
TAF1C	0	genome.wustl.edu	37	16	84218535	84218535	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	84218535	84218535	G	A	SNP	TAF1C	ENST00000378541	human	ensembl	74_37	-1	known	silent	c.60	p.S20	0.001	NULL	superfamily_WD40_repeat_dom	-	no_errors	TAF1C	HGNC	ENSG00000103168				23	0	0	25	5	16.6667
USP10	0	genome.wustl.edu	37	16	84806195	84806195	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	84806195	84806195	G	A	SNP	USP10	ENST00000570191	human	ensembl	74_37	+1	known	missense	c.2059	p.V687M	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Ataxin-2_C,pfscan_Peptidase_C19/C67	-	no_errors	USP10	HGNC	ENSG00000103194				298	0	0	252	73	22.4615
IRF8	0	genome.wustl.edu	37	16	85948086	85948086	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	85948086	85948086	G	A	SNP	IRF8	ENST00000268638	human	ensembl	74_37	+1	known	silent	c.561	p.P187	0.162	NULL	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF8	HGNC	ENSG00000140968				80	0	0	34	12	26.087
SLC7A5	0	genome.wustl.edu	37	16	87872417	87872417	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	87872417	87872417	C	T	SNP	SLC7A5	ENST00000261622	human	ensembl	74_37	-1	known	missense	c.946	p.G316R	1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1,tigrfam_L_AA_transporter	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1,tigrfam_L_AA_transporter	-	no_errors	SLC7A5	HGNC	ENSG00000103257				91	0	0	74	14	15.9091
GALNS	0	genome.wustl.edu	37	16	88901652	88901652	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	88901652	88901652	G	A	SNP	GALNS	ENST00000268695	human	ensembl	74_37	-1	known	silent	c.867	p.N289	0.615	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	GALNS	HGNC	ENSG00000141012				18	0	0	11	6	35.2941
ANKRD11	0	genome.wustl.edu	37	16	89345633	89345633	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	89345633	89345633	G	A	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	silent	c.7317	p.F2439	0.995	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522				47	0	0	24	6	20
TUBB3	0	genome.wustl.edu	37	16	90001817	90001817	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	90001817	90001817	C	T	SNP	TUBB3	ENST00000315491	human	ensembl	74_37	+1	known	missense	c.958	p.R320C	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB3	Uniprot_gn	ENSG00000258947				123	0	0	98	28	22.2222
TUSC5	0	genome.wustl.edu	37	17	1183640	1183640	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	1183640	1183640	C	T	SNP	TUSC5	ENST00000333813	human	ensembl	74_37	+1	known	silent	c.345	p.P115	0.755	pfam_CD225/Dispanin_fam	pfam_CD225/Dispanin_fam	-	no_errors	TUSC5	HGNC	ENSG00000184811				156	0	0	125	32	20.3822
MYOCD	0	genome.wustl.edu	37	17	12639605	12639605	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	12639605	12639605	C	T	SNP	MYOCD	ENST00000425538	human	ensembl	74_37	+1	known	silent	c.543	p.D181	0.218	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MYOCD	HGNC	ENSG00000141052				207	1	0.480769	171	42	19.7183
TRIM16	0	genome.wustl.edu	37	17	15532000	15532000	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	15532000	15532000	C	T	SNP	TRIM16	ENST00000336708	human	ensembl	74_37	-1	known	missense	c.1624	p.A542T	0.006	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,prints_Butyrophylin	-	no_errors	TRIM16	HGNC	ENSG00000221926				80	0	0	54	9	14.2857
NCOR1	0	genome.wustl.edu	37	17	15973548	15973548	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	15973548	15973548	G	A	SNP	NCOR1	ENST00000268712	human	ensembl	74_37	-1	known	missense	c.4444	p.R1482W	0.999	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027				384	0	0	324	82	20.197
ENSG00000226145	0	genome.wustl.edu	37	17	16722181	16722181	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	16722181	16722181	G	A	SNP	ENSG00000226145	ENST00000417510	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC022596.6	Clone_based_vega_gene	ENSG00000226145				47	0	0	26	14	35
ENSG00000226145	0	genome.wustl.edu	37	17	16723374	16723374	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	16723374	16723374	G	A	SNP	ENSG00000226145	ENST00000417510	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.928	-	-	-	no_errors	AC022596.6	Clone_based_vega_gene	ENSG00000226145				109	1	0.909091	99	23	18.8525
RAI1	0	genome.wustl.edu	37	17	17699170	17699170	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	17699170	17699170	G	A	SNP	RAI1	ENST00000353383	human	ensembl	74_37	+1	known	missense	c.2908	p.A970T	0.000	NULL	smart_Znf_PHD	-	no_errors	RAI1	HGNC	ENSG00000108557				43	0	0	30	11	26.8293
FLII	0	genome.wustl.edu	37	17	18148975	18148975	+	Splice_Site	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	18148975	18148975	C	A	SNP	FLII	ENST00000327031	human	ensembl	74_37	-1	known	splice_site	c.3504-1	e28-1	1.000	-	-	-	no_errors	FLII	HGNC	ENSG00000177731				180	0	0	142	45	24.0642
MIEF2	0	genome.wustl.edu	37	17	18167618	18167618	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	18167618	18167618	C	T	SNP	MIEF2	ENST00000323019	human	ensembl	74_37	+1	known	missense	c.905	p.A302V	0.005	NULL	NULL	-	no_errors	MIEF2	HGNC	ENSG00000177427				124	0	0	82	23	21.9048
FBXW10	0	genome.wustl.edu	37	17	18647733	18647733	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	18647733	18647733	G	T	SNP	FBXW10	ENST00000308799	human	ensembl	74_37	+1	known	missense	c.176	p.G59V	0.129	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW10	HGNC	ENSG00000171931				260	0	0	190	52	21.4876
RNF112	0	genome.wustl.edu	37	17	19319112	19319112	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	19319112	19319112	G	A	SNP	RNF112	ENST00000461366	human	ensembl	74_37	+1	novel	missense	c.1520	p.R507H	0.000	NULL	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF112	HGNC	ENSG00000128482				47	0	0	34	24	41.3793
SMG6	0	genome.wustl.edu	37	17	2200581	2200581	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	2200581	2200581	A	G	SNP	SMG6	ENST00000263073	human	ensembl	74_37	-1	known	missense	c.2107	p.Y703H	1.000	pfam_EST1	pfam_EST1,smart_PIN_dom	-	no_errors	SMG6	HGNC	ENSG00000070366				232	0	0	175	36	17.0616
KIAA0100	0	genome.wustl.edu	37	17	26961681	26961681	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	26961681	26961681	G	A	SNP	KIAA0100	ENST00000528896	human	ensembl	74_37	-1	known	missense	c.2924	p.A975V	1.000	NULL	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202				173	0	0	129	37	22.2892
SUPT6H	0	genome.wustl.edu	37	17	27017981	27017981	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	27017981	27017981	G	A	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.3533	p.R1178H	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				68	0	0	47	17	26.5625
SUPT6H	0	genome.wustl.edu	37	17	27028023	27028023	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	27028023	27028023	C	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.4871	p.T1624M	1.000	NULL	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				187	0	0	155	51	24.7573
FLOT2	0	genome.wustl.edu	37	17	27209007	27209007	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	27209007	27209007	G	A	SNP	FLOT2	ENST00000394908	human	ensembl	74_37	-1	known	missense	c.739	p.R247C	0.982	smart_Band_7	pfam_Band_7,smart_Band_7	-	no_errors	FLOT2	HGNC	ENSG00000132589				63	0	0	58	23	28.3951
PHF12	0	genome.wustl.edu	37	17	27238239	27238239	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	27238239	27238239	G	A	SNP	PHF12	ENST00000332830	human	ensembl	74_37	-1	known	silent	c.2106	p.P702	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_SMAD_FHA_domain,smart_Znf_PHD,pfscan_FHA_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF12	HGNC	ENSG00000109118				75	0	0	47	10	17.5439
CORO6	0	genome.wustl.edu	37	17	27946167	27946167	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	27946167	27946167	G	A	SNP	CORO6	ENST00000345068	human	ensembl	74_37	-1	known	missense	c.362	p.T121M	0.998	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO6	HGNC	ENSG00000167549				48	0	0	31	6	16.2162
CPD	0	genome.wustl.edu	37	17	28791650	28791650	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	28791650	28791650	T	G	SNP	CPD	ENST00000225719	human	ensembl	74_37	+1	known	missense	c.3961	p.C1321G	1.000	NULL	pfam_Peptidase_M14,superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPD	HGNC	ENSG00000108582				347	2	0.573066	223	80	26.4026
RAP1GAP2	0	genome.wustl.edu	37	17	2894595	2894595	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	2894595	2894595	T	C	SNP	RAP1GAP2	ENST00000254695	human	ensembl	74_37	+1	known	missense	c.818	p.L273P	0.997	pfscan_Rap_GAP_dom	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	-	no_errors	RAP1GAP2	HGNC	ENSG00000132359				21	0	0	15	3	16.6667
ADAP2	0	genome.wustl.edu	37	17	29280306	29280306	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	29280306	29280306	C	T	SNP	ADAP2	ENST00000330889	human	ensembl	74_37	+1	known	missense	c.742	p.L248F	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,smart_ArfGAP,smart_Pleckstrin_homology,prints_ArfGAP,pfscan_Pleckstrin_homology,pfscan_ArfGAP	-	no_errors	ADAP2	HGNC	ENSG00000184060				54	0	0	41	14	25.4545
OR1D2	0	genome.wustl.edu	37	17	2996177	2996177	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	2996177	2996177	C	T	SNP	OR1D2	ENST00000331459	human	ensembl	74_37	-1	known	silent	c.114	p.T38	0.000	pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1D2	HGNC	ENSG00000184166				246	0	0	157	38	19.4872
ASPA	0	genome.wustl.edu	37	17	3402247	3402247	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	3402247	3402247	G	A	SNP	ASPA	ENST00000263080	human	ensembl	74_37	+1	known	silent	c.807	p.T269	0.563	pfam_Aste_AspA,pirsf_Aspartoacylase	pfam_Aste_AspA,pirsf_Aspartoacylase	-	no_errors	ASPA	HGNC	ENSG00000108381				57	0	0	44	13	22.807
ZNHIT3	0	genome.wustl.edu	37	17	34848677	34848677	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	34848677	34848677	C	T	SNP	ZNHIT3	ENST00000225410	human	ensembl	74_37	+1	known	missense	c.139	p.R47C	0.000	NULL	pfam_Znf_HIT,pfscan_Znf_HIT	-	no_errors	ZNHIT3	HGNC	ENSG00000108278				214	0	0	143	28	16.3743
MYO19	0	genome.wustl.edu	37	17	34869254	34869254	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	34869254	34869254	C	T	SNP	MYO19	ENST00000586007	human	ensembl	74_37	-1	known	silent	c.912	p.T304	0.000	smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO19	HGNC	ENSG00000141140				69	0	0	55	17	23.6111
ACACA	0	genome.wustl.edu	37	17	35487138	35487138	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	35487138	35487138	C	T	SNP	ACACA	ENST00000353139	human	ensembl	74_37	-1	known	missense	c.5686	p.G1896R	0.765	pfam_Carboxyl_trans,pfscan_COA_CT_N	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACA	HGNC	ENSG00000132142				177	0	0	127	32	20.1258
SRCIN1	0	genome.wustl.edu	37	17	36708724	36708724	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	36708724	36708724	C	A	SNP	SRCIN1	ENST00000264659	human	ensembl	74_37	-1	known	missense	c.2439	p.K813N	0.998	NULL	pfam_AIP3_C	-	no_errors	SRCIN1	HGNC	ENSG00000017373				12	0	0	3	4	57.1429
PLXDC1	0	genome.wustl.edu	37	17	37234200	37234200	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	37234200	37234200	G	T	SNP	PLXDC1	ENST00000315392	human	ensembl	74_37	-1	known	silent	c.1152	p.S384	0.991	NULL	pfam_Plexin_repeat,superfamily_Plexin-like_fold	-	no_errors	PLXDC1	HGNC	ENSG00000161381				110	0	0	84	22	20.7547
IKZF3	0	genome.wustl.edu	37	17	37922577	37922577	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	37922577	37922577	C	T	SNP	IKZF3	ENST00000346872	human	ensembl	74_37	-1	known	silent	c.996	p.S332	0.002	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF3	HGNC	ENSG00000161405				157	0	0	116	34	22.6667
ATP2A3	0	genome.wustl.edu	37	17	3851105	3851105	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	3851105	3851105	G	T	SNP	ATP2A3	ENST00000359983	human	ensembl	74_37	-1	known	silent	c.675	p.A225	0.994	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A3	HGNC	ENSG00000074370				46	0	0	19	5	20.8333
TNS4	0	genome.wustl.edu	37	17	38635981	38635981	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	38635981	38635981	C	T	SNP	TNS4	ENST00000254051	human	ensembl	74_37	-1	known	missense	c.1855	p.V619M	0.939	pfam_PTB,smart_PTB/PI_dom	pfam_PTB,pfam_SH2,smart_SH2,smart_PTB/PI_dom,pfscan_SH2	-	no_errors	TNS4	HGNC	ENSG00000131746				80	0	0	73	12	14.1176
KRT10	0	genome.wustl.edu	37	17	38976553	38976553	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	38976553	38976553	T	G	SNP	KRT10	ENST00000269576	human	ensembl	74_37	-1	known	missense	c.990	p.E330D	0.025	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT10	HGNC	ENSG00000186395				273	0	0	259	29	10.0694
KRTAP4-2	0	genome.wustl.edu	37	17	39334156	39334156	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	39334156	39334156	T	C	SNP	KRTAP4-2	ENST00000377726	human	ensembl	74_37	-1	known	silent	c.261	p.R87	0.003	NULL	NULL	-	no_errors	KRTAP4-2	HGNC	ENSG00000244537				93	0	0	80	19	19.1919
KRT36	0	genome.wustl.edu	37	17	39643638	39643638	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	39643638	39643638	C	T	SNP	KRT36	ENST00000328119	human	ensembl	74_37	-1	known	missense	c.952	p.A318T	0.009	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT36	HGNC	ENSG00000126337				29	0	0	34	5	12.8205
KRT13	0	genome.wustl.edu	37	17	39658827	39658827	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	39658827	39658827	G	A	SNP	KRT13	ENST00000246635	human	ensembl	74_37	-1	known	missense	c.1043	p.T348M	0.007	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT13	HGNC	ENSG00000171401				184	1	0.540541	134	34	20.2381
DHX58	0	genome.wustl.edu	37	17	40256929	40256929	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	40256929	40256929	C	T	SNP	DHX58	ENST00000251642	human	ensembl	74_37	-1	known	missense	c.1418	p.R473Q	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX58	HGNC	ENSG00000108771				116	0	0	68	25	26.8817
KAT2A	0	genome.wustl.edu	37	17	40266539	40266539	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	40266539	40266539	C	T	SNP	KAT2A	ENST00000225916	human	ensembl	74_37	-1	known	silent	c.2103	p.R701	0.996	pirsf_Hist_acetylase_PCAF,superfamily_Bromodomain	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom,prints_Bromodomain	-	no_errors	KAT2A	HGNC	ENSG00000108773				207	0	0	168	47	21.8605
PLEKHH3	0	genome.wustl.edu	37	17	40825735	40825735	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	40825735	40825735	G	A	SNP	PLEKHH3	ENST00000591022	human	ensembl	74_37	-1	known	missense	c.416	p.A139V	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_MyTH4_dom,pfam_FERM_central,pfam_Ras-assoc,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH3	HGNC	ENSG00000068137				39	0	0	19	7	26.9231
CNTNAP1	0	genome.wustl.edu	37	17	40839898	40839898	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	40839898	40839898	G	A	SNP	CNTNAP1	ENST00000264638	human	ensembl	74_37	+1	known	missense	c.1205	p.R402H	0.673	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797				138	0	0	94	22	18.9655
IFI35	0	genome.wustl.edu	37	17	41165127	41165127	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	41165127	41165127	G	A	SNP	IFI35	ENST00000438323	human	ensembl	74_37	+1	known	missense	c.184	p.V62M	0.000	pfam_Nmi/IFP35_N	pfam_Nmi/IFP35_dom,pfam_Nmi/IFP35_N	-	no_errors	IFI35	HGNC	ENSG00000068079				288	0	0	217	70	24.3902
DHX8	0	genome.wustl.edu	37	17	41598812	41598812	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	41598812	41598812	G	A	SNP	DHX8	ENST00000262415	human	ensembl	74_37	+1	known	missense	c.3142	p.V1048M	1.000	superfamily_P-loop_NTPase	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX8	HGNC	ENSG00000067596				60	0	0	38	13	25.4902
ARHGAP27	0	genome.wustl.edu	37	17	43475404	43475404	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	43475404	43475404	G	A	SNP	ARHGAP27	ENST00000428638	human	ensembl	74_37	-1	known	nonsense	c.1753	p.R585*	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_WW_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP27	HGNC	ENSG00000159314				89	0	0	64	10	13.5135
SMTNL2	0	genome.wustl.edu	37	17	4497136	4497136	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	4497136	4497136	G	A	SNP	SMTNL2	ENST00000389313	human	ensembl	74_37	+1	known	silent	c.750	p.T250	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTNL2	HGNC	ENSG00000188176				90	0	0	71	14	16.4706
LRRC46	0	genome.wustl.edu	37	17	45914298	45914298	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	45914298	45914298	A	G	SNP	LRRC46	ENST00000269025	human	ensembl	74_37	+1	known	missense	c.778	p.T260A	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC46	HGNC	ENSG00000141294				199	0	0	111	31	21.831
HOXB1	0	genome.wustl.edu	37	17	46606967	46606967	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	46606967	46606967	G	A	SNP	HOXB1	ENST00000239174	human	ensembl	74_37	-1	known	missense	c.848	p.A283V	0.923	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB1	HGNC	ENSG00000120094				113	0	0	71	23	24.4681
HOXB3	0	genome.wustl.edu	37	17	46628527	46628527	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	46628527	46628527	G	A	SNP	HOXB3	ENST00000311626	human	ensembl	74_37	-1	known	silent	c.465	p.G155	0.995	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB3	HGNC	ENSG00000120093				12	0	0	8	9	52.9412
ATP5G1	0	genome.wustl.edu	37	17	46973023	46973023	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	46973023	46973023	G	A	SNP	ATP5G1	ENST00000355938	human	ensembl	74_37	+1	known	silent	c.303	p.P101	0.993	pfam_ATPase_proteolipid_c_like_dom,superfamily_ATPase_proteolipid_c_like_dom,prints_ATPase_F0-cplx_csu	pfam_ATPase_proteolipid_c_like_dom,superfamily_ATPase_proteolipid_c_like_dom,prints_ATPase_F0-cplx_csu	-	no_errors	ATP5G1	HGNC	ENSG00000159199				350	0	0	240	81	25.2336
GNGT2	0	genome.wustl.edu	37	17	47284234	47284234	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	47284234	47284234	G	A	SNP	GNGT2	ENST00000300406	human	ensembl	74_37	-1	known	missense	c.95	p.A32V	0.979	pfam_G-protein_gamma-like_dom,superfamily_G-protein_gamma-like_dom,smart_G-protein_gamma-like_dom,pfscan_G-protein_gamma-like_dom,prints_Gprotein-gamma	pfam_G-protein_gamma-like_dom,superfamily_G-protein_gamma-like_dom,smart_G-protein_gamma-like_dom,pfscan_G-protein_gamma-like_dom,prints_Gprotein-gamma	-	no_errors	GNGT2	HGNC	ENSG00000167083				190	0	0	111	36	24.4898
ZNF652	0	genome.wustl.edu	37	17	47394604	47394604	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	47394604	47394604	C	T	SNP	ZNF652	ENST00000362063	human	ensembl	74_37	-1	known	missense	c.484	p.A162T	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF652	HGNC	ENSG00000198740				377	0	0	278	66	19.186
ANKRD40	0	genome.wustl.edu	37	17	48777178	48777178	+	Silent	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	48777178	48777178	A	T	SNP	ANKRD40	ENST00000285243	human	ensembl	74_37	-1	known	silent	c.360	p.V120	0.999	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD40	HGNC	ENSG00000154945				70	0	0	47	17	26.5625
BZRAP1	0	genome.wustl.edu	37	17	56389568	56389568	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	56389568	56389568	G	A	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	missense	c.2614	p.R872C	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379				35	0	0	14	6	30
TRIM37	0	genome.wustl.edu	37	17	57157177	57157177	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	57157177	57157177	G	A	SNP	TRIM37	ENST00000262294	human	ensembl	74_37	-1	known	missense	c.554	p.A185V	1.000	smart_Bbox_C	pfam_Znf_B-box,pfam_MATH,superfamily_TRAF-like,smart_Znf_B-box,smart_Bbox_C,smart_MATH,pfscan_MATH,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM37	HGNC	ENSG00000108395				235	0	0	156	49	23.9024
DHX40	0	genome.wustl.edu	37	17	57679949	57679949	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	57679949	57679949	G	A	SNP	DHX40	ENST00000251241	human	ensembl	74_37	+1	known	missense	c.1873	p.A625T	1.000	pfam_DUF1605	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX40	HGNC	ENSG00000108406				124	0	0	92	30	24.5902
CLTC	0	genome.wustl.edu	37	17	57759076	57759076	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	57759076	57759076	G	A	SNP	CLTC	ENST00000269122	human	ensembl	74_37	+1	known	silent	c.3318	p.A1106	0.035	pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTC	HGNC	ENSG00000141367				169	0	0	131	40	23.3918
MED13	0	genome.wustl.edu	37	17	60059997	60059997	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	60059997	60059997	T	C	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	missense	c.3367	p.T1123A	1.000	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510				308	1	0.323625	221	59	21.0714
CEP95	0	genome.wustl.edu	37	17	62518978	62518978	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	62518978	62518978	G	A	SNP	CEP95	ENST00000556440	human	ensembl	74_37	+1	known	missense	c.874	p.V292I	0.000	NULL	superfamily_CH-domain	-	no_errors	CEP95	HGNC	ENSG00000258890				38	0	0	28	10	26.3158
RGS9	0	genome.wustl.edu	37	17	63189717	63189717	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	63189717	63189717	T	G	SNP	RGS9	ENST00000262406	human	ensembl	74_37	+1	known	missense	c.803	p.L268R	0.999	pfam_G-protein_gamma-like_dom,superfamily_G-protein_gamma-like_dom,smart_G-protein_gamma-like_dom	pfam_RGS_dom,pfam_G-protein_gamma-like_dom,pfam_DEP_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_G-protein_gamma-like_dom,smart_DEP_dom,smart_G-protein_gamma-like_dom,smart_Regulat_G_prot_signal_superfam,pfscan_DEP_dom,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS9	HGNC	ENSG00000108370				88	0	0	74	14	15.9091
AIPL1	0	genome.wustl.edu	37	17	6328845	6328845	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	6328845	6328845	C	T	SNP	AIPL1	ENST00000381129	human	ensembl	74_37	-1	known	missense	c.1090	p.A364T	0.000	NULL	pfam_PPIase_FKBP_dom,smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	AIPL1	HGNC	ENSG00000129221				76	0	0	48	17	26.1538
KPNA2	0	genome.wustl.edu	37	17	66036862	66036862	+	Silent	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	66036862	66036862	C	G	SNP	KPNA2	ENST00000330459	human	ensembl	74_37	+1	known	silent	c.282	p.L94	0.967	pfam_Importin-a_IBB,superfamily_ARM-type_fold	pfam_Armadillo,pfam_Importin-a_IBB,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA2	HGNC	ENSG00000182481				250	0	0	177	44	19.9095
FAM20A	0	genome.wustl.edu	37	17	66538187	66538187	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	66538187	66538187	C	T	SNP	FAM20A	ENST00000592554	human	ensembl	74_37	-1	known	missense	c.1048	p.A350T	1.000	pfam_DUF1193	pfam_DUF1193	-	no_errors	FAM20A	HGNC	ENSG00000108950				135	0	0	93	36	27.907
ABCA9	0	genome.wustl.edu	37	17	67031809	67031809	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	67031809	67031809	G	T	SNP	ABCA9	ENST00000340001	human	ensembl	74_37	-1	known	missense	c.934	p.L312M	0.980	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258				84	0	0	39	16	29.0909
NXN	0	genome.wustl.edu	37	17	708453	708453	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	708453	708453	G	A	SNP	NXN	ENST00000336868	human	ensembl	74_37	-1	known	silent	c.855	p.G285	0.905	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	-	no_errors	NXN	HGNC	ENSG00000167693				32	0	0	18	5	21.7391
TTYH2	0	genome.wustl.edu	37	17	72218769	72218769	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	72218769	72218769	C	T	SNP	TTYH2	ENST00000269346	human	ensembl	74_37	+1	known	missense	c.275	p.T92M	0.943	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH2	HGNC	ENSG00000141540				94	0	0	31	26	45.614
KIF19	0	genome.wustl.edu	37	17	72342526	72342526	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	72342526	72342526	C	T	SNP	KIF19	ENST00000389916	human	ensembl	74_37	+1	known	missense	c.787	p.R263C	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF19	HGNC	ENSG00000196169				10	0	0	0	2	100
KCTD2	0	genome.wustl.edu	37	17	73059172	73059172	+	RNA	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	73059172	73059172	G	T	SNP	KCTD2	ENST00000577516	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	KCTD2	HGNC	ENSG00000180901				44	0	0	34	2	5.55556
SLC16A5	0	genome.wustl.edu	37	17	73096181	73096181	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	73096181	73096181	C	T	SNP	SLC16A5	ENST00000329783	human	ensembl	74_37	+1	known	silent	c.423	p.N141	0.979	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A5	HGNC	ENSG00000170190				33	0	0	22	5	18.5185
NLGN2	0	genome.wustl.edu	37	17	7320376	7320376	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7320376	7320376	T	C	SNP	NLGN2	ENST00000302926	human	ensembl	74_37	+1	known	missense	c.1766	p.V589A	1.000	pfam_CarbesteraseB,prints_Neuroligin	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN2	HGNC	ENSG00000169992				51	0	0	23	8	25.8065
LLGL2	0	genome.wustl.edu	37	17	73555400	73555400	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	73555400	73555400	G	A	SNP	LLGL2	ENST00000392550	human	ensembl	74_37	+1	known	missense	c.439	p.G147S	1.000	superfamily_WD40_repeat_dom	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL2	HGNC	ENSG00000073350				76	0	0	36	15	29.4118
GALK1	0	genome.wustl.edu	37	17	73754610	73754610	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	73754610	73754610	C	T	SNP	GALK1	ENST00000437911	human	ensembl	74_37	-1	known	silent	c.954	p.T318	0.000	pirsf_Galactokinase,prints_Galactokinase,tigrfam_Galactokinase	pfam_GalKase_gal-bd,pfam_GHMP_kinase_C_dom,pfam_GHMP_kinase_N_dom,superfamily_Ribosomal_S5_D2-typ_fold,pirsf_Galactokinase,prints_Mevalonate/galactokinase,prints_Galactokinase,prints_Galkinase,tigrfam_Galactokinase	-	no_errors	GALK1	HGNC	ENSG00000108479				12	0	0	5	3	37.5
EVPL	0	genome.wustl.edu	37	17	74004930	74004930	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	74004930	74004930	C	T	SNP	EVPL	ENST00000301607	human	ensembl	74_37	-1	known	silent	c.4356	p.R1452	0.997	NULL	pfam_Plectin_repeat,superfamily_Ferritin-like_SF,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	EVPL	HGNC	ENSG00000167880				171	0	0	109	37	25.3425
EXOC7	0	genome.wustl.edu	37	17	74080177	74080177	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	74080177	74080177	G	A	SNP	EXOC7	ENST00000335146	human	ensembl	74_37	-1	known	missense	c.2015	p.A672V	1.000	pfam_Exo70,superfamily_Cullin_repeat-like_dom	pfam_Exo70,superfamily_Cullin_repeat-like_dom	-	no_errors	EXOC7	HGNC	ENSG00000182473				58	0	0	36	15	29.4118
POLR2A	0	genome.wustl.edu	37	17	7415852	7415852	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7415852	7415852	A	G	SNP	POLR2A	ENST00000322644	human	ensembl	74_37	+1	known	missense	c.4549	p.M1517V	1.000	NULL	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_Rpb1_6,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_7,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_II_repeat_euk,smart_RNA_pol_N	-	no_errors	POLR2A	HGNC	ENSG00000181222				86	0	0	63	5	7.35294
POLR2A	0	genome.wustl.edu	37	17	7417070	7417070	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7417070	7417070	G	A	SNP	POLR2A	ENST00000322644	human	ensembl	74_37	+1	known	silent	c.5487	p.S1829	0.293	pfam_RNA_pol_II_repeat_euk	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_Rpb1_6,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_7,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_II_repeat_euk,smart_RNA_pol_N	-	no_errors	POLR2A	HGNC	ENSG00000181222				266	0	0	225	58	20.4947
SPHK1	0	genome.wustl.edu	37	17	74382511	74382511	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	74382511	74382511	C	T	SNP	SPHK1	ENST00000323374	human	ensembl	74_37	+1	known	missense	c.554	p.T185I	0.006	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	SPHK1	HGNC	ENSG00000176170				65	0	0	38	13	25.4902
SEPT9	0	genome.wustl.edu	37	17	75478334	75478334	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	75478334	75478334	G	A	SNP	SEPT9	ENST00000427177	human	ensembl	74_37	+1	known	missense	c.830	p.G277D	1.000	superfamily_P-loop_NTPase	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	SEPT9	HGNC	ENSG00000184640				50	0	0	36	9	20
TP53	0	genome.wustl.edu	37	17	7578424	7578424	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7578424	7578424	A	G	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.506	p.M169T	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				85	0	0	40	5	11.1111
DNAH17	0	genome.wustl.edu	37	17	76430202	76430202	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	76430202	76430202	C	A	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.12115	p.A4039S	0.955	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775				167	0	0	118	33	21.8543
TIMP2	0	genome.wustl.edu	37	17	76869992	76869992	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	76869992	76869992	G	A	SNP	TIMP2	ENST00000262768	human	ensembl	74_37	-1	known	missense	c.140	p.A47V	1.000	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	-	no_errors	TIMP2	HGNC	ENSG00000035862				113	0	0	92	35	27.5591
DNAH2	0	genome.wustl.edu	37	17	7691222	7691222	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7691222	7691222	G	A	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	silent	c.6648	p.P2216	0.382	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914				116	1	0.854701	92	18	16.3636
C1QTNF1	0	genome.wustl.edu	37	17	77043914	77043914	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	77043914	77043914	T	C	SNP	C1QTNF1	ENST00000354124	human	ensembl	74_37	+1	known	missense	c.620	p.L207P	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF1	HGNC	ENSG00000173918				136	1	0.729927	97	17	14.9123
DNAH2	0	genome.wustl.edu	37	17	7710586	7710586	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7710586	7710586	C	T	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	silent	c.9561	p.G3187	0.981	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914				139	0	0	96	32	25
CYB5D1	0	genome.wustl.edu	37	17	7761538	7761538	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7761538	7761538	A	T	SNP	CYB5D1	ENST00000332439	human	ensembl	74_37	+1	known	missense	c.86	p.N29I	1.000	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pfscan_Cyt_B5-like_heme/steroid-bd	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pfscan_Cyt_B5-like_heme/steroid-bd	-	no_errors	CYB5D1	HGNC	ENSG00000182224				107	0	0	86	36	29.5082
CBX8	0	genome.wustl.edu	37	17	77769888	77769888	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	77769888	77769888	G	A	SNP	CBX8	ENST00000269385	human	ensembl	74_37	-1	known	missense	c.214	p.R72C	1.000	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CBX8	HGNC	ENSG00000141570				375	0	0	313	81	20.5584
CHD3	0	genome.wustl.edu	37	17	7803346	7803346	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7803346	7803346	T	C	SNP	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	missense	c.2677	p.S893P	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				50	0	0	36	15	29.4118
RNF213	0	genome.wustl.edu	37	17	78317076	78317076	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	78317076	78317076	C	T	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.6134	p.A2045V	0.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821				50	0	0	37	5	11.9048
GUCY2D	0	genome.wustl.edu	37	17	7917326	7917326	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7917326	7917326	A	G	SNP	GUCY2D	ENST00000254854	human	ensembl	74_37	+1	known	missense	c.2392	p.M798V	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Haem_no_assoc-bd,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	GUCY2D	HGNC	ENSG00000132518				146	0	0	86	26	23.2143
C17orf70	0	genome.wustl.edu	37	17	79514156	79514156	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	79514156	79514156	T	C	SNP	C17orf70	ENST00000327787	human	ensembl	74_37	-1	known	missense	c.1952	p.Q651R	1.000	NULL	NULL	-	no_errors	C17orf70	HGNC	ENSG00000185504				59	0	0	44	10	18.5185
SLC16A3	0	genome.wustl.edu	37	17	80195343	80195343	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	80195343	80195343	G	A	SNP	SLC16A3	ENST00000392339	human	ensembl	74_37	+1	known	missense	c.697	p.V233M	0.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A3	HGNC	ENSG00000141526				24	0	0	20	5	20
TBCD	0	genome.wustl.edu	37	17	80884364	80884364	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	80884364	80884364	C	T	SNP	TBCD	ENST00000355528	human	ensembl	74_37	+1	known	missense	c.2468	p.A823V	0.101	superfamily_ARM-type_fold	pfam_Tubulin_specific_chaperoneD_C,superfamily_ARM-type_fold	-	no_errors	TBCD	HGNC	ENSG00000141556				41	0	0	40	10	20
SLC25A35	0	genome.wustl.edu	37	17	8197809	8197809	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	8197809	8197809	G	A	SNP	SLC25A35	ENST00000577745	human	ensembl	74_37	-1	known	missense	c.317	p.A106V	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A35	HGNC	ENSG00000125434				51	0	0	37	7	15.9091
MYH10	0	genome.wustl.edu	37	17	8381732	8381732	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	8381732	8381732	C	T	SNP	MYH10	ENST00000396239	human	ensembl	74_37	-1	known	missense	c.5600	p.R1867H	0.994	pfam_Myosin_tail,superfamily_HR1_rho-bd	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026				197	0	0	143	43	23.1183
CCDC42	0	genome.wustl.edu	37	17	8638419	8638419	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	8638419	8638419	C	T	SNP	CCDC42	ENST00000293845	human	ensembl	74_37	-1	known	missense	c.868	p.D290N	1.000	NULL	NULL	-	no_errors	CCDC42	HGNC	ENSG00000161973				80	0	0	47	11	18.9655
USP43	0	genome.wustl.edu	37	17	9570015	9570015	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	9570015	9570015	T	C	SNP	USP43	ENST00000285199	human	ensembl	74_37	+1	known	silent	c.687	p.A229	0.196	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP43	HGNC	ENSG00000154914				47	0	0	25	7	21.875
GAS7	0	genome.wustl.edu	37	17	9828912	9828912	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	9828912	9828912	C	T	SNP	GAS7	ENST00000432992	human	ensembl	74_37	-1	known	missense	c.1019	p.R340Q	1.000	NULL	pfam_FCH_dom,pfam_WW_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_WW_dom,smart_SH3_domain,smart_WW_dom,smart_FCH_dom,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_WW_dom	-	no_errors	GAS7	HGNC	ENSG00000007237				129	0	0	83	22	20.9524
GAS7	0	genome.wustl.edu	37	17	9923135	9923135	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	9923135	9923135	G	A	SNP	GAS7	ENST00000432992	human	ensembl	74_37	-1	known	missense	c.263	p.S88L	1.000	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	pfam_FCH_dom,pfam_WW_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_WW_dom,smart_SH3_domain,smart_WW_dom,smart_FCH_dom,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_WW_dom	-	no_errors	GAS7	HGNC	ENSG00000007237				98	0	0	67	16	19.2771
CTAGE1	0	genome.wustl.edu	37	18	19996086	19996086	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	19996086	19996086	G	T	SNP	CTAGE1	ENST00000391403	human	ensembl	74_37	-1	known	silent	c.1689	p.P563	0.002	NULL	NULL	-	no_errors	CTAGE1	HGNC	ENSG00000212710				125	0	0	82	33	28.6957
OSBPL1A	0	genome.wustl.edu	37	18	21891961	21891961	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	21891961	21891961	T	C	SNP	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	missense	c.1079	p.K360R	0.993	NULL	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447				391	0	0	279	95	25.4011
DSG4	0	genome.wustl.edu	37	18	28991227	28991227	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	28991227	28991227	C	T	SNP	DSG4	ENST00000359747	human	ensembl	74_37	+1	known	missense	c.2228	p.T743M	0.827	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmosomal_cadherin	-	no_errors	DSG4	HGNC	ENSG00000175065				125	0	0	90	16	15.0943
KIAA1328	0	genome.wustl.edu	37	18	34465570	34465570	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	34465570	34465570	A	G	SNP	KIAA1328	ENST00000280020	human	ensembl	74_37	+1	known	missense	c.383	p.E128G	1.000	NULL	NULL	-	no_errors	KIAA1328	HGNC	ENSG00000150477				18	0	0	14	3	17.6471
COLEC12	0	genome.wustl.edu	37	18	347267	347267	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	347267	347267	G	A	SNP	COLEC12	ENST00000400256	human	ensembl	74_37	-1	known	missense	c.355	p.R119C	0.989	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	COLEC12	HGNC	ENSG00000158270				227	0	0	148	58	28.1553
DLGAP1	0	genome.wustl.edu	37	18	3879906	3879906	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	3879906	3879906	C	A	SNP	DLGAP1	ENST00000315677	human	ensembl	74_37	-1	known	missense	c.163	p.A55S	1.000	NULL	pfam_GKAP	-	no_errors	DLGAP1	HGNC	ENSG00000170579				79	0	0	71	22	23.6559
ST8SIA5	0	genome.wustl.edu	37	18	44260327	44260327	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	44260327	44260327	G	A	SNP	ST8SIA5	ENST00000315087	human	ensembl	74_37	-1	known	missense	c.809	p.S270L	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA5	HGNC	ENSG00000101638				58	0	0	35	8	18.6047
ZBTB7C	0	genome.wustl.edu	37	18	45566726	45566726	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	45566726	45566726	G	A	SNP	ZBTB7C	ENST00000332053	human	ensembl	74_37	-1	known	silent	c.753	p.F251	0.009	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7C	HGNC	ENSG00000184828				88	0	0	51	13	20.3125
ME2	0	genome.wustl.edu	37	18	48473730	48473730	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	48473730	48473730	G	A	SNP	ME2	ENST00000585680	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	ME2	HGNC	ENSG00000082212				10	0	0	6	2	25
WDR7	0	genome.wustl.edu	37	18	54603098	54603098	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	54603098	54603098	G	A	SNP	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	missense	c.3793	p.A1265T	1.000	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157				153	0	0	79	35	30.7018
ZNF532	0	genome.wustl.edu	37	18	56586342	56586342	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	56586342	56586342	G	A	SNP	ZNF532	ENST00000336078	human	ensembl	74_37	+1	known	missense	c.823	p.A275T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF532	HGNC	ENSG00000074657				134	0	0	93	35	27.3438
ZNF532	0	genome.wustl.edu	37	18	56646392	56646392	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	56646392	56646392	G	A	SNP	ZNF532	ENST00000336078	human	ensembl	74_37	+1	known	missense	c.3256	p.A1086T	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF532	HGNC	ENSG00000074657				163	0	0	98	23	19.0083
CPLX4	0	genome.wustl.edu	37	18	56979989	56979989	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	56979989	56979989	A	G	SNP	CPLX4	ENST00000299721	human	ensembl	74_37	-1	known	silent	c.183	p.A61	0.753	pfam_Synaphin	pfam_Synaphin	-	no_errors	CPLX4	HGNC	ENSG00000166569				103	0	0	79	18	18.5567
LMAN1	0	genome.wustl.edu	37	18	57020530	57020530	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	57020530	57020530	G	A	SNP	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	silent	c.543	p.D181	1.000	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf,superfamily_HMG_box_dom	-	no_errors	LMAN1	HGNC	ENSG00000074695				213	0	0	179	17	8.67347
KIAA1468	0	genome.wustl.edu	37	18	59895676	59895676	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	59895676	59895676	A	G	SNP	KIAA1468	ENST00000256858	human	ensembl	74_37	+1	known	silent	c.1293	p.G431	0.000	NULL	pfam_HEAT,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_HEAT_type_2,pfscan_LisH_dimerisation	-	no_errors	KIAA1468	HGNC	ENSG00000134444				154	1	0.645161	144	31	17.7143
SERPINB3	0	genome.wustl.edu	37	18	61326636	61326636	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	61326636	61326636	T	C	SNP	SERPINB3	ENST00000283752	human	ensembl	74_37	-1	known	silent	c.348	p.L116	0.585	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB3	HGNC	ENSG00000057149				220	0	0	131	43	24.7126
RTTN	0	genome.wustl.edu	37	18	67836303	67836303	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	67836303	67836303	C	A	SNP	RTTN	ENST00000255674	human	ensembl	74_37	-1	known	missense	c.1477	p.A493S	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225				83	0	0	69	22	24.1758
LAMA1	0	genome.wustl.edu	37	18	7044752	7044752	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	7044752	7044752	C	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	silent	c.945	p.P315	0.021	pfam_EGF_laminin,smart_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				269	0	0	199	40	16.7364
TIMM21	0	genome.wustl.edu	37	18	71822600	71822600	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	71822600	71822600	T	C	SNP	TIMM21	ENST00000169551	human	ensembl	74_37	+1	known	missense	c.424	p.Y142H	1.000	pfam_Tim21	pfam_Tim21	-	no_errors	TIMM21	HGNC	ENSG00000075336				149	0	0	110	27	19.708
TSHZ1	0	genome.wustl.edu	37	18	72999246	72999246	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	72999246	72999246	G	A	SNP	TSHZ1	ENST00000580243	human	ensembl	74_37	+1	known	silent	c.1884	p.T628	0.993	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ1	HGNC	ENSG00000179981				55	0	0	39	10	20.4082
NFATC1	0	genome.wustl.edu	37	18	77211059	77211059	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	77211059	77211059	C	T	SNP	NFATC1	ENST00000427363	human	ensembl	74_37	+1	known	silent	c.1695	p.R565	0.000	pfam_RHD,superfamily_p53-like_TF_DNA-bd,pfscan_RHD	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC1	HGNC	ENSG00000131196				117	0	0	91	37	28.9062
RAB12	0	genome.wustl.edu	37	18	8636338	8636338	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	8636338	8636338	G	A	SNP	RAB12	ENST00000329286	human	ensembl	74_37	+1	known	missense	c.604	p.D202N	1.000	pfam_Small_GTPase,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB12	HGNC	ENSG00000206418				63	0	0	40	9	18.3673
ICAM5	0	genome.wustl.edu	37	19	10404792	10404792	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	10404792	10404792	T	C	SNP	ICAM5	ENST00000221980	human	ensembl	74_37	+1	known	silent	c.1788	p.C596	0.990	smart_Ig_sub	pfam_Ig_I-set,pfam_ICAM_N,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM5	HGNC	ENSG00000105376				130	0	0	82	36	30.5085
PDE4A	0	genome.wustl.edu	37	19	10570296	10570296	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	10570296	10570296	G	A	SNP	PDE4A	ENST00000352831	human	ensembl	74_37	+1	known	missense	c.1226	p.R409H	0.957	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4A	HGNC	ENSG00000065989				55	0	0	39	7	15.2174
HMHA1	0	genome.wustl.edu	37	19	1085856	1085856	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	1085856	1085856	G	A	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	missense	c.3262	p.G1088R	0.002	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448				60	0	0	48	19	28.3582
DNM2	0	genome.wustl.edu	37	19	10908090	10908090	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	10908090	10908090	G	T	SNP	DNM2	ENST00000314646	human	ensembl	74_37	+1	known	missense	c.1231	p.A411S	1.000	pfam_Dynamin_central	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM2	HGNC	ENSG00000079805				79	0	0	81	28	25.6881
RAB3D	0	genome.wustl.edu	37	19	11446182	11446182	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	11446182	11446182	T	G	SNP	RAB3D	ENST00000222120	human	ensembl	74_37	-1	known	missense	c.413	p.D138A	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB3D	HGNC	ENSG00000105514				66	0	0	70	22	23.913
PRKCSH	0	genome.wustl.edu	37	19	11559934	11559934	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	11559934	11559934	G	A	SNP	PRKCSH	ENST00000252455	human	ensembl	74_37	+1	known	missense	c.1384	p.A462T	0.682	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_LDrepeatLR_classA_rpt,pfscan_EF_hand_dom	-	no_errors	PRKCSH	HGNC	ENSG00000130175				77	0	0	57	18	24
ENSG00000188474	0	genome.wustl.edu	37	19	12223806	12223806	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	12223806	12223806	G	A	SNP	ENSG00000188474	ENST00000339302	human	ensembl	74_37	+1	known	missense	c.1444	p.A482T	0.863	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF788	Uniprot_gn	ENSG00000188474				45	0	0	39	10	20.4082
ZNF625	0	genome.wustl.edu	37	19	12256589	12256589	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	12256589	12256589	A	G	SNP	ZNF625	ENST00000439556	human	ensembl	74_37	-1	known	silent	c.642	p.T214	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF625	HGNC	ENSG00000257591				245	0	0	182	42	18.75
ZNF799	0	genome.wustl.edu	37	19	12501871	12501871	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	12501871	12501871	T	G	SNP	ZNF799	ENST00000430385	human	ensembl	74_37	-1	known	missense	c.1341	p.K447N	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF799	HGNC	ENSG00000196466				190	0	0	151	52	25.6158
ZNF791	0	genome.wustl.edu	37	19	12739381	12739381	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	12739381	12739381	C	T	SNP	ZNF791	ENST00000343325	human	ensembl	74_37	+1	known	silent	c.1038	p.H346	0.164	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF791	HGNC	ENSG00000173875				131	0	0	118	35	22.8758
DHPS	0	genome.wustl.edu	37	19	12791075	12791075	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	12791075	12791075	C	T	SNP	DHPS	ENST00000210060	human	ensembl	74_37	-1	known	missense	c.272	p.R91H	1.000	pfam_Deoxyhypusine_synthase,tigrfam_Deoxyhypusine_synthase	pfam_Deoxyhypusine_synthase,tigrfam_Deoxyhypusine_synthase	-	no_errors	DHPS	HGNC	ENSG00000095059				279	1	0.357143	186	73	28.1853
FBXW9	0	genome.wustl.edu	37	19	12800036	12800036	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	12800036	12800036	C	T	SNP	FBXW9	ENST00000380339	human	ensembl	74_37	-1	known	silent	c.1461	p.Q487	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW9	HGNC	ENSG00000132004				66	0	0	40	14	25.9259
NFIX	0	genome.wustl.edu	37	19	13184812	13184812	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	13184812	13184812	C	T	SNP	NFIX	ENST00000585575	human	ensembl	74_37	+1	known	missense	c.766	p.R256W	0.999	pfam_CTF/NFI	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIX	HGNC	ENSG00000008441				80	0	0	63	7	10
CACNA1A	0	genome.wustl.edu	37	19	13323306	13323306	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	13323306	13323306	G	A	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.6081	p.S2027	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				15	0	0	4	4	50
CACNA1A	0	genome.wustl.edu	37	19	13414687	13414687	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	13414687	13414687	G	A	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.1998	p.G666	0.599	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCCAlpha1	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				165	0	0	111	36	24.4898
CACNA1A	0	genome.wustl.edu	37	19	13470495	13470495	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	13470495	13470495	G	A	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.903	p.F301	0.997	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				23	0	0	18	4	18.1818
LPHN1	0	genome.wustl.edu	37	19	14288438	14288438	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	14288438	14288438	G	A	SNP	LPHN1	ENST00000340736	human	ensembl	74_37	-1	known	silent	c.189	p.Y63	0.992	pfam_Lectin_gal-bd_dom,pfscan_Lectin_gal-bd_dom	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN1	HGNC	ENSG00000072071				184	0	0	124	33	21.0191
DAZAP1	0	genome.wustl.edu	37	19	1428934	1428934	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	1428934	1428934	G	A	SNP	DAZAP1	ENST00000233078	human	ensembl	74_37	+1	known	missense	c.640	p.A214T	0.998	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	DAZAP1	HGNC	ENSG00000071626				31	0	0	25	7	21.875
APC2	0	genome.wustl.edu	37	19	1466376	1466376	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	1466376	1466376	C	T	SNP	APC2	ENST00000233607	human	ensembl	74_37	+1	known	missense	c.3076	p.R1026W	0.409	NULL	pfam_APC_basic_dom,pfam_APC_dom,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Armadillo	-	no_errors	APC2	HGNC	ENSG00000115266				12	0	0	7	6	46.1538
OR7A17	0	genome.wustl.edu	37	19	14991937	14991937	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	14991937	14991937	T	C	SNP	OR7A17	ENST00000327462	human	ensembl	74_37	-1	known	silent	c.231	p.T77	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7A17	HGNC	ENSG00000185385				104	0	0	88	28	24.1379
AKAP8	0	genome.wustl.edu	37	19	15483787	15483787	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	15483787	15483787	A	G	SNP	AKAP8	ENST00000269701	human	ensembl	74_37	-1	known	missense	c.736	p.S246P	0.043	NULL	pfam_AKAP95	-	no_errors	AKAP8	HGNC	ENSG00000105127				19	0	0	18	4	18.1818
OR10H5	0	genome.wustl.edu	37	19	15905420	15905420	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	15905420	15905420	G	T	SNP	OR10H5	ENST00000308940	human	ensembl	74_37	+1	known	missense	c.562	p.A188S	0.990	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H5	HGNC	ENSG00000172519				119	0	0	79	36	31.3043
CYP4F11	0	genome.wustl.edu	37	19	16034738	16034738	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	16034738	16034738	C	T	SNP	CYP4F11	ENST00000248041	human	ensembl	74_37	-1	known	missense	c.802	p.D268N	0.646	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F11	HGNC	ENSG00000171903				164	0	0	136	39	22.2857
CPAMD8	0	genome.wustl.edu	37	19	17014586	17014586	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	17014586	17014586	C	T	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.4474	p.A1492T	1.000	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				174	0	0	110	29	20.8633
CPAMD8	0	genome.wustl.edu	37	19	17108023	17108023	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	17108023	17108023	G	A	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	silent	c.1134	p.V378	0.999	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				42	0	0	39	7	15.2174
USE1	0	genome.wustl.edu	37	19	17327091	17327091	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	17327091	17327091	G	A	SNP	USE1	ENST00000263897	human	ensembl	74_37	+1	known	silent	c.345	p.A115	0.560	pfam_Vesicle_transport_protein_Use1	pfam_Vesicle_transport_protein_Use1	-	no_errors	USE1	HGNC	ENSG00000053501				94	0	0	60	10	14.2857
PLVAP	0	genome.wustl.edu	37	19	17476377	17476377	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	17476377	17476377	G	A	SNP	PLVAP	ENST00000252590	human	ensembl	74_37	-1	known	silent	c.897	p.R299	0.121	pfam_PV-1	pfam_PV-1	-	no_errors	PLVAP	HGNC	ENSG00000130300				59	0	0	40	19	32.2034
MAP1S	0	genome.wustl.edu	37	19	17838387	17838387	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	17838387	17838387	C	T	SNP	MAP1S	ENST00000324096	human	ensembl	74_37	+1	known	missense	c.2194	p.P732S	0.871	NULL	NULL	-	no_errors	MAP1S	HGNC	ENSG00000130479				21	0	0	22	7	24.1379
IL12RB1	0	genome.wustl.edu	37	19	18177481	18177481	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	18177481	18177481	C	T	SNP	IL12RB1	ENST00000593993	human	ensembl	74_37	-1	known	missense	c.1354	p.V452I	0.005	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL12RB1	HGNC	ENSG00000096996				176	0	0	134	36	21.1765
IL12RB1	0	genome.wustl.edu	37	19	18183096	18183096	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	18183096	18183096	G	A	SNP	IL12RB1	ENST00000593993	human	ensembl	74_37	-1	known	nonsense	c.847	p.R283*	0.001	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL12RB1	HGNC	ENSG00000096996				58	0	0	36	9	20
REXO1	0	genome.wustl.edu	37	19	1825905	1825905	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	1825905	1825905	G	A	SNP	REXO1	ENST00000170168	human	ensembl	74_37	-1	known	missense	c.1949	p.S650L	0.000	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	REXO1	HGNC	ENSG00000079313				115	0	0	82	26	24.0741
RAB3A	0	genome.wustl.edu	37	19	18313398	18313398	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	18313398	18313398	G	A	SNP	RAB3A	ENST00000222256	human	ensembl	74_37	-1	known	silent	c.153	p.F51	0.939	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB3A	HGNC	ENSG00000105649				247	0	0	196	61	23.7354
UPF1	0	genome.wustl.edu	37	19	18966799	18966799	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	18966799	18966799	C	T	SNP	UPF1	ENST00000599848	human	ensembl	74_37	+1	known	missense	c.1643	p.T548M	1.000	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase	pfam_RNA-helicase_UPF1_UPF2-interct,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase	-	no_errors	UPF1	HGNC	ENSG00000005007				33	0	0	31	8	20.5128
SUGP2	0	genome.wustl.edu	37	19	19136833	19136833	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	19136833	19136833	G	A	SNP	SUGP2	ENST00000456085	human	ensembl	74_37	-1	known	missense	c.29	p.A10V	0.987	NULL	pfam_Surp,pfam_G_patch_dom,superfamily_Surp,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	SUGP2	HGNC	ENSG00000064607				179	0	0	141	45	24.1935
NCAN	0	genome.wustl.edu	37	19	19329854	19329854	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	19329854	19329854	C	T	SNP	NCAN	ENST00000252575	human	ensembl	74_37	+1	known	silent	c.204	p.S68	0.000	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Link,pfam_C-type_lectin,pfam_Sushi_SCR_CCP,pfam_Ig_V-set,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link,prints_AntifreezeII	-	no_errors	NCAN	HGNC	ENSG00000130287				57	0	0	42	9	17.6471
NCAN	0	genome.wustl.edu	37	19	19351447	19351447	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	19351447	19351447	G	A	SNP	NCAN	ENST00000252575	human	ensembl	74_37	+1	known	missense	c.3445	p.D1149N	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	pfam_Link,pfam_C-type_lectin,pfam_Sushi_SCR_CCP,pfam_Ig_V-set,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link,prints_AntifreezeII	-	no_errors	NCAN	HGNC	ENSG00000130287				87	0	0	69	23	25
GATAD2A	0	genome.wustl.edu	37	19	19576260	19576260	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	19576260	19576260	T	C	SNP	GATAD2A	ENST00000358713	human	ensembl	74_37	+1	known	silent	c.106	p.L36	0.257	NULL	pfam_Znf_GATA,pfscan_Znf_GATA	-	no_errors	GATAD2A	HGNC	ENSG00000167491				104	0	0	74	16	17.7778
GATAD2A	0	genome.wustl.edu	37	19	19613299	19613299	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	19613299	19613299	G	A	SNP	GATAD2A	ENST00000358713	human	ensembl	74_37	+1	known	missense	c.1735	p.A579T	0.001	NULL	pfam_Znf_GATA,pfscan_Znf_GATA	-	no_errors	GATAD2A	HGNC	ENSG00000167491				142	0	0	70	26	27.0833
ZNF714	0	genome.wustl.edu	37	19	21300337	21300337	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	21300337	21300337	T	C	SNP	ZNF714	ENST00000596143	human	ensembl	74_37	+1	known	silent	c.867	p.C289	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF714	HGNC	ENSG00000160352				26	0	0	20	7	25.9259
ZNF57	0	genome.wustl.edu	37	19	2917163	2917163	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	2917163	2917163	C	T	SNP	ZNF57	ENST00000306908	human	ensembl	74_37	+1	known	missense	c.544	p.H182Y	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF57	HGNC	ENSG00000171970				109	0	0	77	19	19.7917
TLE6	0	genome.wustl.edu	37	19	2987969	2987969	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	2987969	2987969	C	T	SNP	TLE6	ENST00000246112	human	ensembl	74_37	+1	known	silent	c.699	p.V233	0.877	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE6	HGNC	ENSG00000104953				34	0	0	17	8	32
ZNF536	0	genome.wustl.edu	37	19	31040042	31040042	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	31040042	31040042	C	A	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	silent	c.3516	p.S1172	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597				108	0	0	73	26	26.2626
GNA11	0	genome.wustl.edu	37	19	3119270	3119270	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	3119270	3119270	T	G	SNP	GNA11	ENST00000078429	human	ensembl	74_37	+1	known	missense	c.802	p.S268A	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_Q	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_Q,prints_Fungi_Gprotein_alpha	-	no_errors	GNA11	HGNC	ENSG00000088256				144	0	0	92	27	22.6891
TSHZ3	0	genome.wustl.edu	37	19	31768425	31768425	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	31768425	31768425	C	T	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	silent	c.2274	p.A758	0.905	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297				101	0	0	69	22	24.1758
KIAA0355	0	genome.wustl.edu	37	19	34838949	34838949	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	34838949	34838949	T	C	SNP	KIAA0355	ENST00000299505	human	ensembl	74_37	+1	known	splice_site	c.2687+2	e10+2	1.000	-	-	-	no_errors	KIAA0355	HGNC	ENSG00000166398				50	0	0	30	7	18.9189
ZNF599	0	genome.wustl.edu	37	19	35250008	35250008	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	35250008	35250008	A	G	SNP	ZNF599	ENST00000329285	human	ensembl	74_37	-1	known	silent	c.1698	p.N566	0.024	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF599	HGNC	ENSG00000153896				292	0	0	200	77	27.7978
LSR	0	genome.wustl.edu	37	19	35753459	35753459	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	35753459	35753459	C	T	SNP	LSR	ENST00000361790	human	ensembl	74_37	+1	known	silent	c.786	p.F262	0.673	pfam_LISCH7	pfam_LISCH7,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	LSR	HGNC	ENSG00000105699				199	0	0	144	38	20.8791
MAG	0	genome.wustl.edu	37	19	35800979	35800979	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	35800979	35800979	G	A	SNP	MAG	ENST00000392213	human	ensembl	74_37	+1	known	silent	c.1434	p.G478	0.014	NULL	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MAG	HGNC	ENSG00000105695				54	0	0	30	13	30.2326
TBXA2R	0	genome.wustl.edu	37	19	3600476	3600476	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	3600476	3600476	G	A	SNP	TBXA2R	ENST00000411851	human	ensembl	74_37	-1	known	missense	c.157	p.R53W	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Thbox_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	TBXA2R	HGNC	ENSG00000006638				21	0	0	11	8	42.1053
ATP4A	0	genome.wustl.edu	37	19	36043937	36043937	+	Splice_Site	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	36043937	36043937	A	G	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	splice_site	c.2751+2	e18+2	1.000	-	-	-	no_errors	ATP4A	HGNC	ENSG00000105675				72	0	0	69	15	17.8571
ATP4A	0	genome.wustl.edu	37	19	36046581	36046581	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	36046581	36046581	C	T	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	missense	c.2003	p.R668H	0.978	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675				214	0	0	135	40	22.8571
ARHGAP33	0	genome.wustl.edu	37	19	36269464	36269464	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	36269464	36269464	G	A	SNP	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	silent	c.369	p.P123	0.989	superfamily_Phox	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777				90	0	0	89	19	17.5926
WDR62	0	genome.wustl.edu	37	19	36557260	36557260	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	36557260	36557260	A	G	SNP	WDR62	ENST00000401500	human	ensembl	74_37	+1	known	silent	c.492	p.S164	0.996	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR62	HGNC	ENSG00000075702				31	0	0	28	6	17.6471
APBA3	0	genome.wustl.edu	37	19	3760158	3760158	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	3760158	3760158	G	A	SNP	APBA3	ENST00000316757	human	ensembl	74_37	-1	known	silent	c.105	p.S35	0.001	NULL	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA3	HGNC	ENSG00000011132				80	0	0	50	13	20.6349
DPF1	0	genome.wustl.edu	37	19	38706786	38706786	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	38706786	38706786	G	A	SNP	DPF1	ENST00000355526	human	ensembl	74_37	-1	known	nonsense	c.973	p.R325*	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_C2H2-like,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2	-	no_errors	DPF1	HGNC	ENSG00000011332				106	0	0	75	30	28.5714
RYR1	0	genome.wustl.edu	37	19	38949797	38949797	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	38949797	38949797	C	T	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.2179	p.R727C	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				74	0	0	57	12	17.3913
RYR1	0	genome.wustl.edu	37	19	39003103	39003103	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	39003103	39003103	A	G	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.9452	p.Q3151R	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				92	0	0	68	32	32
EEF2	0	genome.wustl.edu	37	19	3976737	3976737	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	3976737	3976737	C	T	SNP	EEF2	ENST00000309311	human	ensembl	74_37	-1	known	missense	c.2392	p.A798T	1.000	pfam_EFG_V,superfamily_EFG_III-V,smart_EFG_V	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EEF2	HGNC	ENSG00000167658				14	0	0	14	2	12.5
LGALS16	0	genome.wustl.edu	37	19	40149264	40149264	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	40149264	40149264	G	A	SNP	LGALS16	ENST00000392051	human	ensembl	74_37	+1	known	missense	c.257	p.G86D	0.145	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS16	HGNC	ENSG00000249861				22	0	0	19	6	24
DYRK1B	0	genome.wustl.edu	37	19	40316485	40316485	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	40316485	40316485	G	A	SNP	DYRK1B	ENST00000323039	human	ensembl	74_37	-1	known	missense	c.1760	p.P587L	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1B	HGNC	ENSG00000105204				23	0	0	9	7	43.75
CNTD2	0	genome.wustl.edu	37	19	40730477	40730477	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	40730477	40730477	C	T	SNP	CNTD2	ENST00000430325	human	ensembl	74_37	-1	known	missense	c.431	p.R144H	0.015	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CNTD2	HGNC	ENSG00000105219				221	0	0	128	45	26.0116
LTBP4	0	genome.wustl.edu	37	19	41132925	41132925	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	41132925	41132925	G	T	SNP	LTBP4	ENST00000308370	human	ensembl	74_37	+1	known	missense	c.4229	p.S1410I	1.000	superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006				24	0	0	16	3	15.7895
AXL	0	genome.wustl.edu	37	19	41745098	41745098	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	41745098	41745098	G	T	SNP	AXL	ENST00000301178	human	ensembl	74_37	+1	known	missense	c.1164	p.E388D	0.988	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AXL	HGNC	ENSG00000167601				105	0	0	69	16	18.8235
HNRNPUL1	0	genome.wustl.edu	37	19	41798252	41798252	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	41798252	41798252	C	A	SNP	HNRNPUL1	ENST00000392006	human	ensembl	74_37	+1	known	missense	c.1102	p.L368I	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_SAP_dom,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323				265	1	0.37594	197	55	21.8254
B3GNT8	0	genome.wustl.edu	37	19	41932375	41932375	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	41932375	41932375	G	A	SNP	B3GNT8	ENST00000321702	human	ensembl	74_37	-1	known	silent	c.309	p.T103	0.003	NULL	pfam_Glyco_trans_31	-	no_errors	B3GNT8	HGNC	ENSG00000177191				33	0	0	23	7	23.3333
GRIK5	0	genome.wustl.edu	37	19	42563569	42563569	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	42563569	42563569	G	A	SNP	GRIK5	ENST00000301218	human	ensembl	74_37	-1	known	missense	c.619	p.R207C	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK5	HGNC	ENSG00000105737				145	0	0	103	18	14.876
POU2F2	0	genome.wustl.edu	37	19	42621421	42621421	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	42621421	42621421	G	A	SNP	POU2F2	ENST00000342301	human	ensembl	74_37	-1	known	missense	c.284	p.T95M	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU,prints_TF_octamer	-	no_errors	POU2F2	HGNC	ENSG00000028277				172	0	0	111	35	23.9726
DEDD2	0	genome.wustl.edu	37	19	42713974	42713974	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	42713974	42713974	C	T	SNP	DEDD2	ENST00000595337	human	ensembl	74_37	-1	known	missense	c.467	p.R156Q	1.000	NULL	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	-	no_errors	DEDD2	HGNC	ENSG00000160570				51	0	0	32	11	25.5814
MEGF8	0	genome.wustl.edu	37	19	42861648	42861648	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	42861648	42861648	G	A	SNP	MEGF8	ENST00000251268	human	ensembl	74_37	+1	known	silent	c.4923	p.P1641	0.002	superfamily_Gal_Oxase/kelch_b-propeller	pfam_CUB_dom,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_CUB_dom,smart_EG-like_dom,smart_Plexin-like_fold,smart_EGF-like_Ca-bd_dom,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429				56	0	0	65	14	17.7215
LYPD3	0	genome.wustl.edu	37	19	43967403	43967403	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	43967403	43967403	C	T	SNP	LYPD3	ENST00000244333	human	ensembl	74_37	-1	known	missense	c.419	p.C140Y	1.000	pfam_LY6_UPAR	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LYPD3	HGNC	ENSG00000124466				83	0	0	60	18	23.0769
KCNN4	0	genome.wustl.edu	37	19	44280754	44280754	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	44280754	44280754	A	C	SNP	KCNN4	ENST00000262888	human	ensembl	74_37	-1	known	missense	c.194	p.I65S	1.000	pfam_K_chnl_Ca-activ_SK	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom	-	no_errors	KCNN4	HGNC	ENSG00000104783				43	0	0	27	15	35.7143
ZNF225	0	genome.wustl.edu	37	19	44635779	44635779	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	44635779	44635779	C	A	SNP	ZNF225	ENST00000262894	human	ensembl	74_37	+1	known	missense	c.1012	p.H338N	0.865	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF225	HGNC	ENSG00000256294				280	0	0	188	62	24.8
ZNF112	0	genome.wustl.edu	37	19	44832877	44832877	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	44832877	44832877	A	G	SNP	ZNF112	ENST00000536500	human	ensembl	74_37	-1	known	missense	c.1502	p.L501S	0.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF112	HGNC	ENSG00000062370				360	0	0	221	89	28.7097
PLIN4	0	genome.wustl.edu	37	19	4512549	4512549	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	4512549	4512549	C	T	SNP	PLIN4	ENST00000301286	human	ensembl	74_37	-1	novel	missense	c.1381	p.G461S	0.005	superfamily_Ankyrin_rpt-contain_dom	pfam_Perilipin,superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PLIN4	HGNC	ENSG00000167676				253	0	0	157	53	25.2381
PLIN5	0	genome.wustl.edu	37	19	4523795	4523795	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	4523795	4523795	C	T	SNP	PLIN5	ENST00000381848	human	ensembl	74_37	-1	known	silent	c.1137	p.A379	0.218	pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN5	HGNC	ENSG00000214456				26	0	0	21	5	19.2308
ZNF296	0	genome.wustl.edu	37	19	45574970	45574970	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	45574970	45574970	C	T	SNP	ZNF296	ENST00000303809	human	ensembl	74_37	-1	known	silent	c.1317	p.T439	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF296	HGNC	ENSG00000170684				118	0	0	97	27	21.7742
DMWD	0	genome.wustl.edu	37	19	46288989	46288989	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	46288989	46288989	C	T	SNP	DMWD	ENST00000270223	human	ensembl	74_37	-1	known	missense	c.1765	p.E589K	0.997	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMWD	HGNC	ENSG00000185800				67	0	0	41	6	12.766
PPP5C	0	genome.wustl.edu	37	19	46890636	46890636	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	46890636	46890636	G	A	SNP	PPP5C	ENST00000012443	human	ensembl	74_37	+1	known	missense	c.1061	p.G354D	1.000	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,pirsf_Ser/Thr_PPase_5,prints_Ser/Thr-sp_prot-phosphatase	pfam_PEstase_dom,pfam_PPP_dom,pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_Ser/Thr-sp_prot-phosphatase,pirsf_Ser/Thr_PPase_5,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP5C	HGNC	ENSG00000011485				46	0	0	31	12	27.907
CCDC8	0	genome.wustl.edu	37	19	46914767	46914767	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	46914767	46914767	G	A	SNP	CCDC8	ENST00000307522	human	ensembl	74_37	-1	known	missense	c.1301	p.A434V	0.000	NULL	NULL	-	no_errors	CCDC8	HGNC	ENSG00000169515				79	0	0	68	23	25.2747
NPAS1	0	genome.wustl.edu	37	19	47548656	47548656	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	47548656	47548656	C	T	SNP	NPAS1	ENST00000449844	human	ensembl	74_37	+1	known	missense	c.1520	p.P507L	0.000	NULL	pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS1	HGNC	ENSG00000130751				19	0	0	28	7	20
NAPA	0	genome.wustl.edu	37	19	47991636	47991636	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	47991636	47991636	T	C	SNP	NAPA	ENST00000263354	human	ensembl	74_37	-1	known	missense	c.797	p.Y266C	0.959	prints_NSF_attach	prints_NSF_attach	-	no_errors	NAPA	HGNC	ENSG00000105402				76	0	0	50	12	19.3548
TPRX1	0	genome.wustl.edu	37	19	48306062	48306062	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	48306062	48306062	G	A	SNP	TPRX1	ENST00000535759	human	ensembl	74_37	-1	known	missense	c.497	p.T166M	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TPRX1	HGNC	ENSG00000178928				13	0	0	6	3	33.3333
PLA2G4C	0	genome.wustl.edu	37	19	48565257	48565257	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	48565257	48565257	C	T	SNP	PLA2G4C	ENST00000599111	human	ensembl	74_37	-1	known	missense	c.1285	p.E429K	0.962	superfamily_Acyl_Trfase/lysoPLipase,smart_LysoPLipase_cat_dom,pfscan_LysoPLipase_cat_dom	pfam_LysoPLipase_cat_dom,superfamily_Acyl_Trfase/lysoPLipase,smart_LysoPLipase_cat_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4C	HGNC	ENSG00000105499				201	0	0	129	50	27.933
DHDH	0	genome.wustl.edu	37	19	49448111	49448111	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	49448111	49448111	C	T	SNP	DHDH	ENST00000221403	human	ensembl	74_37	+1	known	missense	c.926	p.S309L	0.137	NULL	pfam_Oxidoreductase_N	-	no_errors	DHDH	HGNC	ENSG00000104808				168	0	0	121	23	15.9722
PIH1D1	0	genome.wustl.edu	37	19	49949668	49949668	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	49949668	49949668	C	T	SNP	PIH1D1	ENST00000262265	human	ensembl	74_37	-1	known	missense	c.844	p.A282T	0.994	pfam_PIH	pfam_PIH	-	no_errors	PIH1D1	HGNC	ENSG00000104872				65	0	0	33	12	26.6667
ZNF473	0	genome.wustl.edu	37	19	50548543	50548543	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	50548543	50548543	G	A	SNP	ZNF473	ENST00000270617	human	ensembl	74_37	+1	known	nonsense	c.843	p.W281*	0.851	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF473	HGNC	ENSG00000142528				255	0	0	196	56	22.2222
MYH14	0	genome.wustl.edu	37	19	50747580	50747580	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	50747580	50747580	T	C	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	missense	c.1196	p.M399T	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357				44	0	0	29	10	25.641
LRRC4B	0	genome.wustl.edu	37	19	51021091	51021091	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	51021091	51021091	C	T	SNP	LRRC4B	ENST00000389201	human	ensembl	74_37	-1	known	missense	c.1879	p.A627T	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4B	HGNC	ENSG00000131409				20	0	0	14	4	22.2222
KLK12	0	genome.wustl.edu	37	19	51535273	51535273	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	51535273	51535273	C	T	SNP	KLK12	ENST00000250351	human	ensembl	74_37	-1	known	missense	c.316	p.E106K	0.835	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK12	HGNC	ENSG00000186474				35	0	0	13	12	48
SIGLEC8	0	genome.wustl.edu	37	19	51961233	51961233	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	51961233	51961233	A	G	SNP	SIGLEC8	ENST00000321424	human	ensembl	74_37	-1	known	missense	c.409	p.S137P	0.000	smart_Ig_sub	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC8	HGNC	ENSG00000105366				251	0	0	205	58	22.0532
PTPRS	0	genome.wustl.edu	37	19	5212474	5212474	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	5212474	5212474	C	A	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	missense	c.4646	p.R1549L	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426				19	0	0	6	2	25
PTPRS	0	genome.wustl.edu	37	19	5244133	5244133	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	5244133	5244133	G	A	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	missense	c.1352	p.P451L	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426				125	0	0	92	6	6.12245
ZNF836	0	genome.wustl.edu	37	19	52659509	52659509	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	52659509	52659509	C	T	SNP	ZNF836	ENST00000322146	human	ensembl	74_37	-1	known	missense	c.1427	p.G476D	0.976	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF836	HGNC	ENSG00000196267				306	0	0	188	57	23.2653
PPP2R1A	0	genome.wustl.edu	37	19	52715983	52715983	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	52715983	52715983	G	A	SNP	PPP2R1A	ENST00000322088	human	ensembl	74_37	+1	known	missense	c.548	p.R183Q	1.000	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1A	HGNC	ENSG00000105568				95	0	0	69	18	20.6897
PPP2R1A	0	genome.wustl.edu	37	19	52724264	52724264	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	52724264	52724264	C	A	SNP	PPP2R1A	ENST00000322088	human	ensembl	74_37	+1	known	missense	c.1396	p.L466M	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1A	HGNC	ENSG00000105568				141	0	0	140	8	5.40541
ZNF83	0	genome.wustl.edu	37	19	53158850	53158850	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	53158850	53158850	C	T	SNP	ZNF83	ENST00000595171	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.455	-	-	-	no_errors	ZNF83	HGNC	ENSG00000167766				226	0	0	146	52	26.2626
ZNF813	0	genome.wustl.edu	37	19	53994075	53994075	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	53994075	53994075	C	T	SNP	ZNF813	ENST00000396403	human	ensembl	74_37	+1	known	missense	c.589	p.R197W	0.026	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF813	HGNC	ENSG00000198346				254	0	0	195	64	24.7104
NLRP12	0	genome.wustl.edu	37	19	54314260	54314260	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	54314260	54314260	G	A	SNP	NLRP12	ENST00000324134	human	ensembl	74_37	-1	known	missense	c.653	p.A218V	0.844	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP12	HGNC	ENSG00000142405				139	0	0	105	28	21.0526
TMC4	0	genome.wustl.edu	37	19	54669187	54669187	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	54669187	54669187	C	T	SNP	TMC4	ENST00000301187	human	ensembl	74_37	-1	known	missense	c.911	p.R304Q	0.496	NULL	pfam_TMC	-	no_errors	TMC4	HGNC	ENSG00000167608				22	0	0	18	4	18.1818
LILRB3	0	genome.wustl.edu	37	19	54721312	54721312	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	54721312	54721312	G	A	SNP	LILRB3	ENST00000407860	human	ensembl	74_37	-1	known	missense	c.1676	p.T559M	0.000	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB3	HGNC	ENSG00000204577				75	0	0	63	15	19.2308
LAIR1	0	genome.wustl.edu	37	19	54872811	54872811	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	54872811	54872811	G	T	SNP	LAIR1	ENST00000391742	human	ensembl	74_37	-1	known	missense	c.76	p.L26M	0.001	NULL	smart_Ig_sub	-	no_errors	LAIR1	HGNC	ENSG00000167613				197	0	0	147	36	19.6721
LILRA2	0	genome.wustl.edu	37	19	55086397	55086397	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	55086397	55086397	C	T	SNP	LILRA2	ENST00000251377	human	ensembl	74_37	+1	known	silent	c.552	p.P184	0.000	smart_Ig_sub,pirsf_A1B_glyco/leuk_Ig-like_rcpt	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA2	HGNC	ENSG00000239998				178	0	0	142	39	21.547
KIR2DL3	0	genome.wustl.edu	37	19	55250015	55250015	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	55250015	55250015	C	T	SNP	KIR2DL3	ENST00000434419	human	ensembl	74_37	+1	known	missense	c.5	p.S2L	0.978	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL3	HGNC	ENSG00000243772				42	0	0	24	11	31.4286
NLRP7	0	genome.wustl.edu	37	19	55451377	55451377	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	55451377	55451377	G	A	SNP	NLRP7	ENST00000446217	human	ensembl	74_37	-1	known	silent	c.894	p.C298	0.000	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634				95	0	0	70	23	24.7312
NLRP2	0	genome.wustl.edu	37	19	55481476	55481476	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	55481476	55481476	G	A	SNP	NLRP2	ENST00000448584	human	ensembl	74_37	+1	known	silent	c.93	p.T31	0.004	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP2	HGNC	ENSG00000022556				110	0	0	86	17	16.5049
BRSK1	0	genome.wustl.edu	37	19	55816195	55816195	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	55816195	55816195	G	A	SNP	BRSK1	ENST00000590333	human	ensembl	74_37	+1	known	missense	c.1672	p.G558S	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	BRSK1	HGNC	ENSG00000160469				12	0	0	6	3	33.3333
SAFB2	0	genome.wustl.edu	37	19	5592763	5592763	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	5592763	5592763	G	A	SNP	SAFB2	ENST00000252542	human	ensembl	74_37	-1	known	silent	c.2343	p.I781	0.003	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254				53	0	0	32	11	25.5814
ZNF628	0	genome.wustl.edu	37	19	55993938	55993938	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	55993938	55993938	G	T	SNP	ZNF628	ENST00000598519	human	ensembl	74_37	+1	known	missense	c.1378	p.G460C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF628	HGNC	ENSG00000197483				30	0	0	12	4	25
ZNF470	0	genome.wustl.edu	37	19	57088950	57088950	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	57088950	57088950	C	T	SNP	ZNF470	ENST00000330619	human	ensembl	74_37	+1	known	missense	c.1153	p.R385C	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF470	HGNC	ENSG00000197016				143	0	0	102	29	22.1374
ZIM2	0	genome.wustl.edu	37	19	57286617	57286617	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	57286617	57286617	T	C	SNP	ZIM2	ENST00000221722	human	ensembl	74_37	-1	known	silent	c.1023	p.V341	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZIM2	HGNC	ENSG00000269699				190	0	0	156	37	19.171
ZNF776	0	genome.wustl.edu	37	19	58266024	58266024	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	58266024	58266024	T	C	SNP	ZNF776	ENST00000317178	human	ensembl	74_37	+1	known	missense	c.1526	p.V509A	0.118	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF776	HGNC	ENSG00000152443				129	0	0	94	29	23.5772
ZNF814	0	genome.wustl.edu	37	19	58385049	58385049	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	58385049	58385049	T	C	SNP	ZNF814	ENST00000435989	human	ensembl	74_37	-1	known	missense	c.1709	p.H570R	0.994	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF814	HGNC	ENSG00000204514				56	0	0	47	21	30.8824
ZNF814	0	genome.wustl.edu	37	19	58385762	58385762	+	Silent	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	58385762	58385762	C	G	SNP	ZNF814	ENST00000435989	human	ensembl	74_37	-1	known	silent	c.996	p.S332	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF814	HGNC	ENSG00000204514				12	0	0	6	3	33.3333
ZSCAN1	0	genome.wustl.edu	37	19	58565039	58565039	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	58565039	58565039	C	T	SNP	ZSCAN1	ENST00000282326	human	ensembl	74_37	+1	known	missense	c.847	p.P283S	0.011	NULL	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN1	HGNC	ENSG00000152467				56	0	0	70	5	6.66667
ZNF8	0	genome.wustl.edu	37	19	58806136	58806136	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	58806136	58806136	C	T	SNP	ZNF8	ENST00000196548	human	ensembl	74_37	+1	known	missense	c.962	p.S321F	0.997	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF8	Uniprot_gn	ENSG00000083842				112	0	0	94	28	22.9508
ZSCAN22	0	genome.wustl.edu	37	19	58849911	58849911	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	58849911	58849911	C	T	SNP	ZSCAN22	ENST00000329665	human	ensembl	74_37	+1	known	missense	c.695	p.A232V	0.000	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN22	HGNC	ENSG00000182318				340	0	0	242	70	22.4359
ZNF324B	0	genome.wustl.edu	37	19	58967706	58967706	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	58967706	58967706	C	T	SNP	ZNF324B	ENST00000336614	human	ensembl	74_37	+1	known	silent	c.1395	p.G465	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324B	HGNC	ENSG00000249471				112	0	0	74	16	17.7778
RFX2	0	genome.wustl.edu	37	19	6016119	6016119	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	6016119	6016119	G	A	SNP	RFX2	ENST00000303657	human	ensembl	74_37	-1	known	missense	c.761	p.T254M	0.997	pfam_DNA-bd_RFX	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX2	HGNC	ENSG00000087903				63	0	0	49	11	18.3333
POLRMT	0	genome.wustl.edu	37	19	621725	621725	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	621725	621725	G	A	SNP	POLRMT	ENST00000588649	human	ensembl	74_37	-1	known	missense	c.1973	p.P658L	0.298	NULL	pfam_DNA-dir_Rpol_phage-type	-	no_errors	POLRMT	HGNC	ENSG00000099821				19	0	0	8	6	42.8571
DENND1C	0	genome.wustl.edu	37	19	6470356	6470356	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	6470356	6470356	G	A	SNP	DENND1C	ENST00000381480	human	ensembl	74_37	-1	known	missense	c.1312	p.H438Y	0.991	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1C	HGNC	ENSG00000205744				19	0	0	7	5	41.6667
TRIP10	0	genome.wustl.edu	37	19	6743586	6743586	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	6743586	6743586	G	A	SNP	TRIP10	ENST00000313244	human	ensembl	74_37	+1	known	missense	c.490	p.A164T	1.000	NULL	pfam_FCH_dom,pfam_SH3_domain,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	TRIP10	HGNC	ENSG00000125733				61	0	0	49	19	27.9412
ENSG00000269680	0	genome.wustl.edu	37	19	6751381	6751381	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	6751381	6751381	C	T	SNP	ENSG00000269680	ENST00000594056	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-3128G10.6	Clone_based_vega_gene	ENSG00000269680				11	0	0	5	4	44.4444
SH2D3A	0	genome.wustl.edu	37	19	6752655	6752655	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	6752655	6752655	C	T	SNP	SH2D3A	ENST00000245908	human	ensembl	74_37	-1	known	silent	c.1680	p.K560	1.000	smart_RasGRF_CDC25	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,prints_SH2	-	no_errors	SH2D3A	HGNC	ENSG00000125731				11	0	0	4	3	42.8571
C19orf45	0	genome.wustl.edu	37	19	7573246	7573246	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	7573246	7573246	G	A	SNP	C19orf45	ENST00000361664	human	ensembl	74_37	+1	known	missense	c.1448	p.R483H	0.000	NULL	NULL	-	no_errors	C19orf45	HGNC	ENSG00000198723				61	0	0	33	10	23.2558
MISP	0	genome.wustl.edu	37	19	758615	758615	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	758615	758615	C	T	SNP	MISP	ENST00000215582	human	ensembl	74_37	+1	known	missense	c.1669	p.R557W	0.851	NULL	NULL	-	no_errors	MISP	HGNC	ENSG00000099812				109	0	0	79	21	21
XAB2	0	genome.wustl.edu	37	19	7687494	7687494	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	7687494	7687494	G	A	SNP	XAB2	ENST00000358368	human	ensembl	74_37	-1	known	silent	c.1425	p.P475	0.412	smart_HAT	smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	XAB2	HGNC	ENSG00000076924				70	0	0	55	10	15.3846
CLEC4M	0	genome.wustl.edu	37	19	7830511	7830511	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	7830511	7830511	C	T	SNP	CLEC4M	ENST00000359059	human	ensembl	74_37	+1	known	missense	c.139	p.L47F	0.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CLEC4M	HGNC	ENSG00000104938				104	0	0	105	7	6.25
CTXN1	0	genome.wustl.edu	37	19	7990265	7990265	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	7990265	7990265	C	T	SNP	CTXN1	ENST00000318978	human	ensembl	74_37	-1	known	silent	c.159	p.L53	1.000	pfam_Cortexin	pfam_Cortexin	-	no_errors	CTXN1	HGNC	ENSG00000178531				19	0	0	5	3	37.5
LPPR3	0	genome.wustl.edu	37	19	815844	815844	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	815844	815844	A	G	SNP	LPPR3	ENST00000359894	human	ensembl	74_37	-1	known	missense	c.83	p.I28T	0.999	superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR3	Uniprot_gn	ENSG00000129951				48	0	0	33	6	15.3846
ADAMTS10	0	genome.wustl.edu	37	19	8651120	8651120	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	8651120	8651120	G	A	SNP	ADAMTS10	ENST00000270328	human	ensembl	74_37	-1	known	missense	c.2546	p.A849V	0.979	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS10	HGNC	ENSG00000142303				32	0	0	21	8	27.5862
MED16	0	genome.wustl.edu	37	19	877065	877065	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	877065	877065	T	G	SNP	MED16	ENST00000325464	human	ensembl	74_37	-1	known	missense	c.1469	p.D490A	1.000	pfam_Mediator_Med16	pfam_Mediator_Med16,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MED16	HGNC	ENSG00000175221				30	0	0	25	3	10.7143
MUC16	0	genome.wustl.edu	37	19	9026257	9026257	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	9026257	9026257	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.36729	p.Y12243	0.000	pfam_SEA_dom,smart_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				246	1	0.404858	185	41	18.1416
MUC16	0	genome.wustl.edu	37	19	9072974	9072974	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	9072974	9072974	C	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.14472	p.T4824	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				144	0	0	116	34	22.6667
ZNF562	0	genome.wustl.edu	37	19	9764462	9764462	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	9764462	9764462	A	G	SNP	ZNF562	ENST00000448622	human	ensembl	74_37	-1	known	silent	c.444	p.N148	0.008	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF562	HGNC	ENSG00000171466				186	0	0	130	43	24.8555
GRHL1	0	genome.wustl.edu	37	2	10140825	10140825	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	10140825	10140825	C	T	SNP	GRHL1	ENST00000324907	human	ensembl	74_37	+1	known	missense	c.1847	p.T616M	1.000	NULL	pfam_CP2	-	no_errors	GRHL1	HGNC	ENSG00000134317				173	0	0	107	40	27.2109
RNF149	0	genome.wustl.edu	37	2	101910512	101910512	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	101910512	101910512	G	A	SNP	RNF149	ENST00000295317	human	ensembl	74_37	-1	known	silent	c.744	p.G248	1.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF149	HGNC	ENSG00000163162				280	0	0	212	50	19.084
NCK2	0	genome.wustl.edu	37	2	106497880	106497880	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	106497880	106497880	G	A	SNP	NCK2	ENST00000233154	human	ensembl	74_37	+1	known	missense	c.323	p.R108H	1.000	pirsf_Cytoplasmic_NCK	pfam_SH3_domain,pfam_SH3_2,pfam_SH2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pirsf_Cytoplasmic_NCK,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	NCK2	HGNC	ENSG00000071051				36	0	0	29	6	17.1429
ATP6V1C2	0	genome.wustl.edu	37	2	10908887	10908887	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	10908887	10908887	G	A	SNP	ATP6V1C2	ENST00000272238	human	ensembl	74_37	+1	known	missense	c.421	p.A141T	0.761	pfam_ATPase_V1-cplx_csu	pfam_ATPase_V1-cplx_csu	-	no_errors	ATP6V1C2	HGNC	ENSG00000143882				102	1	0.970874	79	5	5.95238
SH3RF3	0	genome.wustl.edu	37	2	109964227	109964227	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	109964227	109964227	G	A	SNP	SH3RF3	ENST00000309415	human	ensembl	74_37	+1	known	missense	c.671	p.R224Q	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,prints_p67phox,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Znf_RING,smart_SH3_domain,prints_p67phox,pfscan_SH3_domain,pfscan_Znf_RING	-	no_errors	SH3RF3	HGNC	ENSG00000172985				54	0	0	29	12	29.2683
KCNF1	0	genome.wustl.edu	37	2	11053802	11053802	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	11053802	11053802	G	A	SNP	KCNF1	ENST00000295082	human	ensembl	74_37	+1	known	missense	c.1250	p.R417H	1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNF1	HGNC	ENSG00000162975				54	0	0	32	12	27.2727
ANAPC1	0	genome.wustl.edu	37	2	112608477	112608477	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	112608477	112608477	A	G	SNP	ANAPC1	ENST00000341068	human	ensembl	74_37	-1	known	missense	c.1526	p.V509A	1.000	NULL	NULL	-	no_errors	ANAPC1	HGNC	ENSG00000153107				73	0	0	74	10	11.9048
ZC3H6	0	genome.wustl.edu	37	2	113089479	113089479	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	113089479	113089479	C	T	SNP	ZC3H6	ENST00000343936	human	ensembl	74_37	+1	known	missense	c.2984	p.A995V	0.999	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H6	HGNC	ENSG00000188177				73	0	0	62	13	17.3333
RGPD8	0	genome.wustl.edu	37	2	113147712	113147712	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	113147712	113147712	T	C	SNP	RGPD8	ENST00000302558	human	ensembl	74_37	-1	known	missense	c.2810	p.E937G	0.565	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD8	HGNC	ENSG00000169629				398	0	0	238	71	22.9773
CKAP2L	0	genome.wustl.edu	37	2	113520087	113520087	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	113520087	113520087	T	A	SNP	CKAP2L	ENST00000302450	human	ensembl	74_37	-1	known	missense	c.97	p.N33Y	0.419	NULL	NULL	-	no_errors	CKAP2L	HGNC	ENSG00000169607				89	0	0	63	23	26.7442
LPIN1	0	genome.wustl.edu	37	2	11923961	11923961	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	11923961	11923961	G	A	SNP	LPIN1	ENST00000449576	human	ensembl	74_37	+1	known	missense	c.1418	p.R473Q	0.999	NULL	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,superfamily_WD40_repeat_dom,smart_LNS2	-	no_errors	LPIN1	HGNC	ENSG00000134324				441	0	0	288	101	25.964
GLI2	0	genome.wustl.edu	37	2	121746587	121746587	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	121746587	121746587	G	A	SNP	GLI2	ENST00000361492	human	ensembl	74_37	+1	known	missense	c.3097	p.E1033K	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047				23	0	0	15	5	25
TFCP2L1	0	genome.wustl.edu	37	2	121997154	121997154	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	121997154	121997154	G	A	SNP	TFCP2L1	ENST00000263707	human	ensembl	74_37	-1	known	silent	c.840	p.N280	0.983	superfamily_SAM/pointed	pfam_CP2,superfamily_SAM/pointed	-	no_errors	TFCP2L1	HGNC	ENSG00000115112				95	0	0	49	11	18.3333
CLASP1	0	genome.wustl.edu	37	2	122286272	122286272	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	122286272	122286272	T	C	SNP	CLASP1	ENST00000263710	human	ensembl	74_37	-1	known	missense	c.359	p.D120G	1.000	pfam_CLASP_N_dom,superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054				300	0	0	252	58	18.7097
IWS1	0	genome.wustl.edu	37	2	128249666	128249666	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	128249666	128249666	T	C	SNP	IWS1	ENST00000295321	human	ensembl	74_37	-1	known	splice_site	c.1930-2	e10-2	1.000	-	-	-	no_errors	IWS1	HGNC	ENSG00000163166				82	0	0	73	16	17.9775
IWS1	0	genome.wustl.edu	37	2	128250886	128250886	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	128250886	128250886	G	A	SNP	IWS1	ENST00000295321	human	ensembl	74_37	-1	known	missense	c.1900	p.R634W	1.000	superfamily_TFIIS_N	pfam_TFIIS_N,superfamily_TFIIS_N	-	no_errors	IWS1	HGNC	ENSG00000163166				135	1	0.735294	93	33	26.1905
POTEF	0	genome.wustl.edu	37	2	130832415	130832415	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	130832415	130832415	C	T	SNP	POTEF	ENST00000357462	human	ensembl	74_37	-1	known	missense	c.2630	p.R877H	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEF	HGNC	ENSG00000196604				75	0	0	41	5	10.8696
PLEKHB2	0	genome.wustl.edu	37	2	132110744	132110744	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	132110744	132110744	G	A	SNP	PLEKHB2	ENST00000303908	human	ensembl	74_37	+1	known	missense	c.575	p.R192H	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHB2	HGNC	ENSG00000115762				14	0	0	11	5	31.25
MZT2A	0	genome.wustl.edu	37	2	132241708	132241708	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	132241708	132241708	G	A	SNP	MZT2A	ENST00000309451	human	ensembl	74_37	-1	known	missense	c.403	p.P135S	1.000	NULL	NULL	-	no_errors	MZT2A	HGNC	ENSG00000173272				153	0	0	124	15	10.7914
GPR39	0	genome.wustl.edu	37	2	133174929	133174929	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	133174929	133174929	C	A	SNP	GPR39	ENST00000329321	human	ensembl	74_37	+1	known	missense	c.314	p.T105N	0.013	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR39	HGNC	ENSG00000183840				108	0	0	71	27	27.551
NCKAP5	0	genome.wustl.edu	37	2	133540971	133540971	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	133540971	133540971	T	C	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	missense	c.3413	p.H1138R	0.902	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771				252	0	0	190	50	20.8333
KIF5C	0	genome.wustl.edu	37	2	149806952	149806952	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	149806952	149806952	A	G	SNP	KIF5C	ENST00000435030	human	ensembl	74_37	+1	known	missense	c.944	p.K315R	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF5C	HGNC	ENSG00000168280				59	0	0	46	8	14.8148
CACNB4	0	genome.wustl.edu	37	2	152695721	152695721	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	152695721	152695721	T	C	SNP	CACNB4	ENST00000539935	human	ensembl	74_37	-1	known	missense	c.1475	p.Y492C	1.000	NULL	pfam_GK/Ca_channel_bsu,pfam_VDCC_L_bsu,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_SH3_domain,prints_VDCC_L_bsu	-	no_errors	CACNB4	HGNC	ENSG00000182389				113	0	0	71	16	18.3908
CACNB4	0	genome.wustl.edu	37	2	152737372	152737372	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	152737372	152737372	A	G	SNP	CACNB4	ENST00000539935	human	ensembl	74_37	-1	known	missense	c.332	p.V111A	1.000	superfamily_SH3_domain	pfam_GK/Ca_channel_bsu,pfam_VDCC_L_bsu,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_SH3_domain,prints_VDCC_L_bsu	-	no_errors	CACNB4	HGNC	ENSG00000182389				42	0	0	39	10	20.4082
KCNJ3	0	genome.wustl.edu	37	2	155555962	155555962	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	155555962	155555962	C	T	SNP	KCNJ3	ENST00000295101	human	ensembl	74_37	+1	known	silent	c.675	p.S225	0.537	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.1,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ3	HGNC	ENSG00000162989				31	0	0	14	4	22.2222
TANC1	0	genome.wustl.edu	37	2	160087129	160087129	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	160087129	160087129	C	T	SNP	TANC1	ENST00000263635	human	ensembl	74_37	+1	known	missense	c.5192	p.A1731V	0.999	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC1	HGNC	ENSG00000115183				153	1	0.649351	131	23	14.9351
TBR1	0	genome.wustl.edu	37	2	162274319	162274319	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	162274319	162274319	C	T	SNP	TBR1	ENST00000389554	human	ensembl	74_37	+1	known	silent	c.825	p.G275	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBR1	HGNC	ENSG00000136535				138	0	0	90	31	25.6198
PXDN	0	genome.wustl.edu	37	2	1653400	1653400	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	1653400	1653400	C	T	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	missense	c.2152	p.A718T	1.000	NULL	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508				99	0	0	64	23	26.4368
LRP2	0	genome.wustl.edu	37	2	170044552	170044552	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	170044552	170044552	G	A	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.9256	p.R3086C	0.985	pfam_LDrepeatLR_classA_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				204	0	0	164	42	20.3883
WIPF1	0	genome.wustl.edu	37	2	175432803	175432803	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	175432803	175432803	T	C	SNP	WIPF1	ENST00000272746	human	ensembl	74_37	-1	known	splice_site	c.1130-2	e5-2	0.998	-	-	-	no_errors	WIPF1	HGNC	ENSG00000115935				38	0	0	37	6	13.9535
CHRNA1	0	genome.wustl.edu	37	2	175622359	175622359	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	175622359	175622359	G	A	SNP	CHRNA1	ENST00000261007	human	ensembl	74_37	-1	known	silent	c.354	p.G118	0.009	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNA1	HGNC	ENSG00000138435				131	0	0	99	24	19.5122
HOXD9	0	genome.wustl.edu	37	2	176987564	176987564	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	176987564	176987564	A	G	SNP	HOXD9	ENST00000249499	human	ensembl	74_37	+1	known	missense	c.68	p.D23G	1.000	pfam_Hox9_activation_N,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXD9	HGNC	ENSG00000128709				22	0	0	21	5	19.2308
TTN	0	genome.wustl.edu	37	2	179422756	179422756	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	179422756	179422756	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.79621	p.T26541A	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				338	0	0	235	81	25.6329
TTN	0	genome.wustl.edu	37	2	179474066	179474066	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	179474066	179474066	A	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.44267	p.I14756T	0.959	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				90	0	0	76	14	15.5556
TTN	0	genome.wustl.edu	37	2	179474465	179474465	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	179474465	179474465	C	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.43981	p.G14661C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				485	0	0	320	121	27.4376
TTN	0	genome.wustl.edu	37	2	179484758	179484758	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	179484758	179484758	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.38682	p.C12894	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				153	0	0	111	36	24.4898
TTN	0	genome.wustl.edu	37	2	179498235	179498235	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	179498235	179498235	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.35147	p.R11716H	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				149	0	0	101	38	27.3381
GEN1	0	genome.wustl.edu	37	2	17961961	17961961	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	17961961	17961961	A	C	SNP	GEN1	ENST00000317402	human	ensembl	74_37	+1	known	missense	c.1482	p.K494N	0.498	NULL	pfam_XPG-I_dom,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	GEN1	HGNC	ENSG00000178295				153	0	0	110	38	25.6757
TTN	0	genome.wustl.edu	37	2	179640257	179640257	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	179640257	179640257	A	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.6334	p.Y2112H	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				137	0	0	84	18	17.6471
ZNF385B	0	genome.wustl.edu	37	2	180309623	180309623	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	180309623	180309623	G	A	SNP	ZNF385B	ENST00000410066	human	ensembl	74_37	-1	known	missense	c.1177	p.R393W	1.000	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZNF385B	HGNC	ENSG00000144331				364	0	0	234	79	25.2396
NUP35	0	genome.wustl.edu	37	2	184023042	184023042	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	184023042	184023042	G	A	SNP	NUP35	ENST00000295119	human	ensembl	74_37	+1	known	missense	c.641	p.R214H	1.000	pfam_RRM_NUP35_dom,pirsf_Nucleoporin_NUP53	pfam_RRM_NUP35_dom,pirsf_Nucleoporin_NUP53	-	no_errors	NUP35	HGNC	ENSG00000163002				105	0	0	70	23	24.7312
ITGAV	0	genome.wustl.edu	37	2	187541575	187541575	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	187541575	187541575	G	A	SNP	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	silent	c.2964	p.A988	0.037	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448				204	0	0	144	41	22.1622
TFPI	0	genome.wustl.edu	37	2	188348879	188348879	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	188348879	188348879	C	T	SNP	TFPI	ENST00000233156	human	ensembl	74_37	-1	known	silent	c.600	p.P200	0.000	pirsf_Prot_inhib_I2_TFPI	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	TFPI	HGNC	ENSG00000003436				129	0	0	78	24	23.5294
COL5A2	0	genome.wustl.edu	37	2	189907474	189907474	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	189907474	189907474	G	T	SNP	COL5A2	ENST00000374866	human	ensembl	74_37	-1	known	missense	c.3497	p.A1166D	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL5A2	HGNC	ENSG00000204262				75	0	0	36	9	20
STAT4	0	genome.wustl.edu	37	2	191898219	191898219	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	191898219	191898219	T	A	SNP	STAT4	ENST00000358470	human	ensembl	74_37	-1	known	missense	c.1849	p.S617C	0.976	pfam_SH2,pfscan_SH2	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,pfscan_SH2	-	no_errors	STAT4	HGNC	ENSG00000138378				118	0	0	85	29	25.4386
MYO1B	0	genome.wustl.edu	37	2	192228478	192228478	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	192228478	192228478	A	G	SNP	MYO1B	ENST00000304164	human	ensembl	74_37	+1	known	missense	c.790	p.M264V	0.935	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1B	HGNC	ENSG00000128641				266	0	0	200	46	18.6992
TMEFF2	0	genome.wustl.edu	37	2	193049142	193049142	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	193049142	193049142	C	T	SNP	TMEFF2	ENST00000272771	human	ensembl	74_37	-1	known	missense	c.350	p.R117Q	0.996	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom,pfscan_EG-like_dom	-	no_errors	TMEFF2	HGNC	ENSG00000144339				139	0	0	84	33	28.2051
DNAH7	0	genome.wustl.edu	37	2	196605585	196605585	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	196605585	196605585	T	C	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.11773	p.I3925V	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997				175	0	0	126	33	20.7547
SATB2	0	genome.wustl.edu	37	2	200173523	200173523	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	200173523	200173523	C	T	SNP	SATB2	ENST00000260926	human	ensembl	74_37	-1	known	missense	c.1700	p.R567H	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	SATB2	HGNC	ENSG00000119042				184	0	0	100	32	24.2424
TYW5	0	genome.wustl.edu	37	2	200813094	200813094	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	200813094	200813094	A	G	SNP	TYW5	ENST00000354611	human	ensembl	74_37	-1	known	silent	c.180	p.I60	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	TYW5	HGNC	ENSG00000162971				187	0	0	160	23	12.5683
CASP10	0	genome.wustl.edu	37	2	202070608	202070608	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	202070608	202070608	A	C	SNP	CASP10	ENST00000286186	human	ensembl	74_37	+1	known	missense	c.725	p.N242T	0.000	NULL	pfam_Pept_C14_caspase,pfam_DED,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,prints_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20	-	no_errors	CASP10	HGNC	ENSG00000003400				92	0	0	54	20	27.027
NRP2	0	genome.wustl.edu	37	2	206587232	206587232	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	206587232	206587232	G	A	SNP	NRP2	ENST00000360409	human	ensembl	74_37	+1	known	missense	c.464	p.S155N	0.998	pirsf_Neuropilin,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_Neuropilin,pfam_CUB_dom,pfam_Coagulation_fac_5/8-C_type_dom,pfam_MAM_dom,pfam_Neuropilin1_C,superfamily_Galactose-bd-like,superfamily_CUB_dom,superfamily_ConA-like_lec_gl_sf,smart_CUB_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_MAM_dom,prints_MAM_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_MAM_dom	-	no_errors	NRP2	HGNC	ENSG00000118257				99	0	0	73	19	20.6522
INO80D	0	genome.wustl.edu	37	2	206874404	206874404	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	206874404	206874404	G	A	SNP	INO80D	ENST00000403263	human	ensembl	74_37	-1	known	missense	c.1657	p.R553C	1.000	NULL	NULL	-	no_errors	INO80D	HGNC	ENSG00000114933				58	0	0	41	12	22.6415
INO80D	0	genome.wustl.edu	37	2	206884472	206884472	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	206884472	206884472	G	A	SNP	INO80D	ENST00000403263	human	ensembl	74_37	-1	known	missense	c.1396	p.H466Y	1.000	NULL	NULL	-	no_errors	INO80D	HGNC	ENSG00000114933				49	0	0	47	10	17.5439
FASTKD2	0	genome.wustl.edu	37	2	207636937	207636937	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	207636937	207636937	A	T	SNP	FASTKD2	ENST00000236980	human	ensembl	74_37	+1	known	missense	c.1147	p.I383F	0.001	NULL	pfam_FAST_Leu-rich,pfam_FAST_2,pfam_RAP,smart_RAP	-	no_errors	FASTKD2	HGNC	ENSG00000118246				168	0	0	94	37	28.2443
CRYGD	0	genome.wustl.edu	37	2	208988911	208988911	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	208988911	208988911	G	A	SNP	CRYGD	ENST00000264376	human	ensembl	74_37	-1	known	silent	c.177	p.R59	0.720	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYGD	HGNC	ENSG00000118231				33	0	0	27	8	22.8571
APOB	0	genome.wustl.edu	37	2	21233212	21233212	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	21233212	21233212	T	C	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	silent	c.6528	p.T2176	0.908	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				114	0	0	68	24	26.087
APOB	0	genome.wustl.edu	37	2	21235467	21235467	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	21235467	21235467	A	G	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.4273	p.S1425P	0.001	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				158	1	0.628931	124	29	18.9542
FN1	0	genome.wustl.edu	37	2	216274341	216274341	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	216274341	216274341	C	T	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	silent	c.2244	p.S748	0.029	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				97	0	0	51	25	32.8947
MREG	0	genome.wustl.edu	37	2	216809644	216809644	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	216809644	216809644	A	G	SNP	MREG	ENST00000263268	human	ensembl	74_37	-1	known	missense	c.587	p.V196A	0.756	NULL	NULL	-	no_errors	MREG	HGNC	ENSG00000118242				69	0	0	48	13	21.3115
RPL37A	0	genome.wustl.edu	37	2	217366124	217366124	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	217366124	217366124	G	A	SNP	RPL37A	ENST00000491306	human	ensembl	74_37	+1	known	silent	c.276	p.Q92	1.000	NULL	pfam_Ribosomal_L37ae,superfamily_Ribosomal_zn-bd,tigrfam_Ribosomal_L37ae	-	no_errors	RPL37A	HGNC	ENSG00000197756				105	0	0	55	19	25.6757
TNS1	0	genome.wustl.edu	37	2	218686571	218686571	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	218686571	218686571	G	T	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	missense	c.3152	p.A1051D	0.000	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				20	0	0	5	3	37.5
AAMP	0	genome.wustl.edu	37	2	219131233	219131233	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	219131233	219131233	C	T	SNP	AAMP	ENST00000248450	human	ensembl	74_37	-1	known	silent	c.612	p.P204	0.022	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AAMP	HGNC	ENSG00000127837				68	0	0	40	20	33.3333
FEV	0	genome.wustl.edu	37	2	219846723	219846723	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	219846723	219846723	A	G	SNP	FEV	ENST00000295727	human	ensembl	74_37	-1	known	missense	c.383	p.F128S	1.000	pfam_Ets_dom,smart_Ets_dom	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	FEV	HGNC	ENSG00000163497				20	0	0	22	7	24.1379
ATG9A	0	genome.wustl.edu	37	2	220085516	220085516	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	220085516	220085516	C	T	SNP	ATG9A	ENST00000361242	human	ensembl	74_37	-1	known	missense	c.2467	p.V823M	0.998	NULL	pfam_Autophagy-rel_prot_9,superfamily_Cyt_c_oxidase_su3	-	no_errors	ATG9A	HGNC	ENSG00000198925				116	1	0.854701	77	28	26.6667
SPEG	0	genome.wustl.edu	37	2	220342646	220342646	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	220342646	220342646	C	T	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	missense	c.4846	p.R1616W	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195				181	0	0	105	31	22.7941
ASIC4	0	genome.wustl.edu	37	2	220402406	220402406	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	220402406	220402406	G	A	SNP	ASIC4	ENST00000347842	human	ensembl	74_37	+1	known	missense	c.1778	p.R593Q	0.993	NULL	pfam_Na+channel_ASC,prints_Na+channel_ASC	-	no_errors	ASIC4	HGNC	ENSG00000072182				55	0	0	34	9	20.9302
OBSL1	0	genome.wustl.edu	37	2	220418400	220418400	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	220418400	220418400	C	A	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.4885	p.V1629L	1.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006				31	0	0	24	3	11.1111
WDFY1	0	genome.wustl.edu	37	2	224746715	224746715	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	224746715	224746715	G	A	SNP	WDFY1	ENST00000233055	human	ensembl	74_37	-1	known	silent	c.1008	p.G336	1.000	pfam_Znf_FYVE,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	pfam_WD40_repeat,pfam_Znf_FYVE,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,smart_WD40_repeat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDFY1	HGNC	ENSG00000085449				399	0	0	269	76	22.029
IRS1	0	genome.wustl.edu	37	2	227663330	227663330	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	227663330	227663330	G	A	SNP	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	missense	c.125	p.A42V	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047				123	1	0.806452	90	25	21.7391
HTR2B	0	genome.wustl.edu	37	2	231973769	231973769	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	231973769	231973769	C	T	SNP	HTR2B	ENST00000258400	human	ensembl	74_37	-1	known	missense	c.908	p.R303Q	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_5HT2B_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_5HT2B_rcpt,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR2B	HGNC	ENSG00000135914				327	0	0	234	65	21.7391
NGEF	0	genome.wustl.edu	37	2	233834974	233834974	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	233834974	233834974	C	T	SNP	NGEF	ENST00000264051	human	ensembl	74_37	-1	known	missense	c.333	p.M111I	0.000	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	NGEF	HGNC	ENSG00000066248				212	0	0	154	46	23
UGT1A6	0	genome.wustl.edu	37	2	234602124	234602124	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	234602124	234602124	C	T	SNP	UGT1A6	ENST00000305139	human	ensembl	74_37	+1	known	silent	c.474	p.I158	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A6	HGNC	ENSG00000167165				302	0	0	212	60	22.0588
ESPNL	0	genome.wustl.edu	37	2	239038938	239038938	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	239038938	239038938	G	A	SNP	ESPNL	ENST00000343063	human	ensembl	74_37	+1	known	missense	c.1583	p.S528N	0.743	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ESPNL	HGNC	ENSG00000144488				10	0	0	11	5	31.25
ILKAP	0	genome.wustl.edu	37	2	239079276	239079276	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	239079276	239079276	G	A	SNP	ILKAP	ENST00000254654	human	ensembl	74_37	-1	known	silent	c.1080	p.D360	0.576	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	ILKAP	HGNC	ENSG00000132323				89	0	0	46	17	26.9841
OTOF	0	genome.wustl.edu	37	2	26693574	26693574	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	26693574	26693574	C	T	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	missense	c.3910	p.E1304K	1.000	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155				85	0	0	55	19	25.6757
OTOF	0	genome.wustl.edu	37	2	26696092	26696092	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	26696092	26696092	C	T	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	missense	c.3641	p.R1214H	1.000	pfam_C2_dom,superfamily_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155				45	0	0	36	9	20
GPN1	0	genome.wustl.edu	37	2	27851977	27851977	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	27851977	27851977	C	T	SNP	GPN1	ENST00000264718	human	ensembl	74_37	+1	known	missense	c.94	p.H32Y	0.000	smart_AAA+_ATPase	pfam_Uncharacterised_ATP-bd,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	GPN1	HGNC	ENSG00000198522				96	0	0	70	13	15.6627
FOSL2	0	genome.wustl.edu	37	2	28627079	28627079	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	28627079	28627079	A	G	SNP	FOSL2	ENST00000264716	human	ensembl	74_37	+1	known	missense	c.208	p.T70A	1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	FOSL2	HGNC	ENSG00000075426				132	0	0	80	24	23.0769
TRMT61B	0	genome.wustl.edu	37	2	29083987	29083987	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	29083987	29083987	G	A	SNP	TRMT61B	ENST00000306108	human	ensembl	74_37	-1	known	silent	c.990	p.D330	1.000	pfam_tRNA_MeTrfase_GCD14,pfam_PCMT	pfam_tRNA_MeTrfase_GCD14,pfam_PCMT	-	no_errors	TRMT61B	HGNC	ENSG00000171103				145	0	0	101	30	22.9008
CAPN13	0	genome.wustl.edu	37	2	30987098	30987098	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	30987098	30987098	A	G	SNP	CAPN13	ENST00000295055	human	ensembl	74_37	-1	known	missense	c.599	p.I200T	0.994	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN13	HGNC	ENSG00000162949				41	0	0	28	7	20
CRIM1	0	genome.wustl.edu	37	2	36704126	36704126	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	36704126	36704126	C	T	SNP	CRIM1	ENST00000280527	human	ensembl	74_37	+1	known	silent	c.1086	p.G362	0.409	pfam_VWF_C,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	pfam_VWF_C,pfam_Antistasin-like,superfamily_Hirudin/antistatin,smart_IGFBP-like,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	-	no_errors	CRIM1	HGNC	ENSG00000150938				193	1	0.515464	148	50	25.2525
VIT	0	genome.wustl.edu	37	2	37035710	37035710	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	37035710	37035710	C	T	SNP	VIT	ENST00000379242	human	ensembl	74_37	+1	known	silent	c.1485	p.D495	1.000	NULL	pfam_VWF_A,pfam_LCCL,superfamily_LCCL,smart_LCCL,smart_VWF_A,pfscan_LCCL,pfscan_VWF_A	-	no_errors	VIT	HGNC	ENSG00000205221				94	0	0	55	16	22.5352
THUMPD2	0	genome.wustl.edu	37	2	39964026	39964026	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	39964026	39964026	G	A	SNP	THUMPD2	ENST00000505747	human	ensembl	74_37	-1	known	missense	c.1361	p.A454V	0.000	NULL	pfam_RNA_methylase_dom,pfam_Methyltransf_11,pfam_THUMP,pfam_Small_mtfrase_dom,pfam_UbiE/COQ5_MeTrFase,smart_THUMP,pfscan_THUMP	-	no_errors	THUMPD2	HGNC	ENSG00000138050				371	0	0	264	65	19.7568
ABCG8	0	genome.wustl.edu	37	2	44099366	44099366	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	44099366	44099366	G	A	SNP	ABCG8	ENST00000272286	human	ensembl	74_37	+1	known	missense	c.1132	p.V378M	0.132	NULL	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	-	no_errors	ABCG8	HGNC	ENSG00000143921				88	0	0	64	19	22.8916
PPM1B	0	genome.wustl.edu	37	2	44459529	44459529	+	RNA	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	44459529	44459529	A	G	SNP	PPM1B	ENST00000459690	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PPM1B	HGNC	ENSG00000138032				140	0	0	128	26	16.8831
PRKCE	0	genome.wustl.edu	37	2	45879393	45879393	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	45879393	45879393	G	A	SNP	PRKCE	ENST00000306156	human	ensembl	74_37	+1	known	missense	c.154	p.G52S	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Prot_kin_PKC_delta,pfscan_C2_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCE	HGNC	ENSG00000171132				81	0	0	51	9	15
STON1-GTF2A1L	0	genome.wustl.edu	37	2	48808788	48808788	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	48808788	48808788	G	A	SNP	STON1-GTF2A1L	ENST00000309827	human	ensembl	74_37	+1	known	missense	c.1016	p.S339N	0.999	pfscan_SHD	pfam_TFIIA_asu/bsu,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,superfamily_TFIIA_b-brl,superfamily_TFIIA_a-hlx,pfscan_Clathrin_mu_C,pfscan_SHD	-	no_errors	STON1-GTF2A1L	HGNC	ENSG00000068781				254	0	0	158	50	24.0385
FSHR	0	genome.wustl.edu	37	2	49190059	49190059	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	49190059	49190059	C	T	SNP	FSHR	ENST00000406846	human	ensembl	74_37	-1	known	missense	c.1901	p.R634H	1.000	prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_GnHR_TM,pfam_LRR-contain_N,pfam_Leu-rich_rpt,smart_LRR-contain_N,pfscan_GPCR_Rhodpsn_7TM,prints_FSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt	-	no_errors	FSHR	HGNC	ENSG00000170820				107	0	0	64	17	20.9877
NRXN1	0	genome.wustl.edu	37	2	51255151	51255151	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	51255151	51255151	G	A	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	silent	c.261	p.G87	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				14	0	0	9	5	35.7143
PSME4	0	genome.wustl.edu	37	2	54119956	54119956	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	54119956	54119956	T	A	SNP	PSME4	ENST00000404125	human	ensembl	74_37	-1	known	missense	c.4180	p.T1394S	1.000	superfamily_ARM-type_fold	pfam_DUF3437,superfamily_ARM-type_fold	-	no_errors	PSME4	HGNC	ENSG00000068878				186	0	0	125	41	24.6988
PNPT1	0	genome.wustl.edu	37	2	55870530	55870530	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	55870530	55870530	G	A	SNP	PNPT1	ENST00000415374	human	ensembl	74_37	-1	known	missense	c.1937	p.T646M	1.000	pfam_KH_dom_type_1,smart_KH_dom,pirsf_PNPase,pfscan_KH_dom_type_1,tigrfam_PNPase	pfam_ExoRNase_PH_dom1,pfam_ExoRNase_PH_dom2,pfam_PNPase_PH_RNA-bd_bac/org-type,pfam_KH_dom_type_1,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ExoRNase_PH_dom2,superfamily_PNPase_PH_RNA-bd_bac/org-type,superfamily_NA-bd_OB-fold,smart_KH_dom,smart_RNA-binding_domain_S1,pirsf_PNPase,pfscan_KH_dom_type_1,pfscan_Rbsml_prot_S1_RNA-bd_dom,tigrfam_PNPase	-	no_errors	PNPT1	HGNC	ENSG00000138035				160	0	0	114	31	21.3793
PUS10	0	genome.wustl.edu	37	2	61188656	61188656	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	61188656	61188656	T	C	SNP	PUS10	ENST00000316752	human	ensembl	74_37	-1	known	silent	c.816	p.P272	1.000	NULL	superfamily_PsdUridine_synth_cat_dom	-	no_errors	PUS10	HGNC	ENSG00000162927				444	0	0	327	77	19.0594
UGP2	0	genome.wustl.edu	37	2	64111196	64111196	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	64111196	64111196	C	T	SNP	UGP2	ENST00000337130	human	ensembl	74_37	+1	known	missense	c.544	p.R182C	1.000	pfam_UDPGP_trans,pirsf_UDPGP_trans_subgr	pfam_UDPGP_trans,pirsf_UDPGP_trans_subgr	-	no_errors	UGP2	HGNC	ENSG00000169764				130	0	0	89	20	18.3486
CEP68	0	genome.wustl.edu	37	2	65298797	65298797	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	65298797	65298797	C	T	SNP	CEP68	ENST00000377990	human	ensembl	74_37	+1	known	silent	c.567	p.S189	0.000	NULL	NULL	-	no_errors	CEP68	HGNC	ENSG00000011523				86	0	0	47	19	28.7879
SPRED2	0	genome.wustl.edu	37	2	65541135	65541135	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	65541135	65541135	G	A	SNP	SPRED2	ENST00000356388	human	ensembl	74_37	-1	known	missense	c.757	p.R253C	1.000	NULL	pfam_Sprouty,pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	SPRED2	HGNC	ENSG00000198369				153	0	0	90	27	23.0769
ADD2	0	genome.wustl.edu	37	2	70900460	70900460	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	70900460	70900460	T	C	SNP	ADD2	ENST00000355733	human	ensembl	74_37	-1	putative	splice_site	c.1742-2	e13-2	0.004	-	-	-	no_errors	ADD2	HGNC	ENSG00000075340				53	0	0	62	14	18.4211
CLEC4F	0	genome.wustl.edu	37	2	71043195	71043195	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	71043195	71043195	G	A	SNP	CLEC4F	ENST00000272367	human	ensembl	74_37	-1	known	nonsense	c.1318	p.Q440*	0.064	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_Prefoldin,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	CLEC4F	HGNC	ENSG00000152672				111	0	0	84	24	22.2222
ZNF638	0	genome.wustl.edu	37	2	71658541	71658541	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	71658541	71658541	C	T	SNP	ZNF638	ENST00000264447	human	ensembl	74_37	+1	known	missense	c.5735	p.A1912V	0.003	NULL	pfam_RRM_dom,smart_Znf_U1,smart_Znf_C2H2-like,smart_RRM_dom,pfscan_Znf_C2H2_matrin,pfscan_RRM_dom	-	no_errors	ZNF638	HGNC	ENSG00000075292				86	0	0	62	18	22.5
DYSF	0	genome.wustl.edu	37	2	71801436	71801436	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	71801436	71801436	C	T	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	missense	c.3376	p.R1126C	1.000	smart_Peroxin/Ferlin	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636				162	0	0	76	21	21.6495
ALMS1	0	genome.wustl.edu	37	2	73676827	73676827	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	73676827	73676827	T	C	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	missense	c.3170	p.V1057A	0.007	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127				277	0	0	175	55	23.913
ALMS1	0	genome.wustl.edu	37	2	73680921	73680921	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	73680921	73680921	A	C	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	missense	c.7264	p.N2422H	0.761	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127				228	0	0	168	46	21.4953
C2orf78	0	genome.wustl.edu	37	2	74042785	74042785	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	74042785	74042785	G	A	SNP	C2orf78	ENST00000409561	human	ensembl	74_37	+1	novel	missense	c.1435	p.A479T	0.000	NULL	NULL	-	no_errors	C2orf78	HGNC	ENSG00000187833				77	0	0	55	21	27.6316
DCTN1	0	genome.wustl.edu	37	2	74596483	74596483	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	74596483	74596483	C	T	SNP	DCTN1	ENST00000361874	human	ensembl	74_37	-1	known	missense	c.1528	p.V510I	1.000	superfamily_P-loop_NTPase	pfam_Dynactin,pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Polyketide_synth_docking,superfamily_P-loop_NTPase,pfscan_CAP-Gly_domain	-	no_errors	DCTN1	HGNC	ENSG00000204843				81	0	0	65	22	25.2874
CTNNA2	0	genome.wustl.edu	37	2	80085186	80085186	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	80085186	80085186	T	A	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.448	p.S150T	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				155	0	0	120	27	18.3673
CTNNA2	0	genome.wustl.edu	37	2	80085188	80085188	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	80085188	80085188	G	A	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	silent	c.450	p.S150	0.002	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				153	0	0	102	45	30.6122
LRRTM1	0	genome.wustl.edu	37	2	80530111	80530111	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	80530111	80530111	G	T	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	silent	c.834	p.T278	0.975	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951				78	0	0	45	13	22.4138
TRABD2A	0	genome.wustl.edu	37	2	85051153	85051153	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	85051153	85051153	G	A	SNP	TRABD2A	ENST00000409520	human	ensembl	74_37	-1	known	missense	c.1258	p.R420W	0.003	NULL	NULL	-	no_errors	TRABD2A	HGNC	ENSG00000186854				36	0	0	22	9	29.0323
ELMOD3	0	genome.wustl.edu	37	2	85598687	85598687	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	85598687	85598687	T	C	SNP	ELMOD3	ENST00000315658	human	ensembl	74_37	+1	known	splice_site	c.607+2	e7+2	1.000	-	-	-	no_errors	ELMOD3	HGNC	ENSG00000115459				155	0	0	116	26	18.3099
SFTPB	0	genome.wustl.edu	37	2	85893744	85893744	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	85893744	85893744	T	C	SNP	SFTPB	ENST00000393822	human	ensembl	74_37	-1	known	missense	c.425	p.Q142R	0.994	pfam_SapB_2,superfamily_Saposin-like,smart_SaposinB,pfscan_SaposinB	pfam_SapB_2,pfam_SapA,pfam_SapB_1,superfamily_Saposin-like,smart_SapA,smart_SaposinB,pfscan_SapA,pfscan_SaposinB,prints_Saposin	-	no_errors	SFTPB	HGNC	ENSG00000168878				119	1	0.833333	101	21	17.2131
MRPL35	0	genome.wustl.edu	37	2	86437712	86437712	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	86437712	86437712	C	T	SNP	MRPL35	ENST00000337109	human	ensembl	74_37	+1	known	missense	c.488	p.T163M	0.984	NULL	pfam_Ribosomal_L35	-	no_errors	MRPL35	HGNC	ENSG00000132313				157	0	0	112	43	27.7419
KCNIP3	0	genome.wustl.edu	37	2	96040058	96040058	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	96040058	96040058	G	A	SNP	KCNIP3	ENST00000295225	human	ensembl	74_37	+1	known	missense	c.196	p.E66K	1.000	NULL	pfam_EF_hand_dom,pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	KCNIP3	HGNC	ENSG00000115041				110	0	0	73	14	16.092
SNRNP200	0	genome.wustl.edu	37	2	96943411	96943411	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	96943411	96943411	T	C	SNP	SNRNP200	ENST00000323853	human	ensembl	74_37	-1	known	missense	c.5797	p.N1933D	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SNRNP200	HGNC	ENSG00000144028				129	1	0.769231	88	24	21.4286
CNNM4	0	genome.wustl.edu	37	2	97463265	97463265	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	97463265	97463265	G	A	SNP	CNNM4	ENST00000377075	human	ensembl	74_37	+1	known	missense	c.1562	p.R521Q	1.000	NULL	pfam_DUF21,pfam_CBS_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	CNNM4	HGNC	ENSG00000158158				99	0	0	71	35	33.0189
ZAP70	0	genome.wustl.edu	37	2	98340772	98340772	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	98340772	98340772	C	T	SNP	ZAP70	ENST00000264972	human	ensembl	74_37	+1	known	silent	c.273	p.P91	0.028	smart_SH2,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ZAP70	HGNC	ENSG00000115085				16	0	0	3	2	40
JAG1	0	genome.wustl.edu	37	20	10620527	10620527	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	10620527	10620527	G	A	SNP	JAG1	ENST00000254958	human	ensembl	74_37	-1	known	silent	c.3276	p.C1092	1.000	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	JAG1	HGNC	ENSG00000101384				45	0	0	22	4	15.3846
SNPH	0	genome.wustl.edu	37	20	1277814	1277814	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	1277814	1277814	C	T	SNP	SNPH	ENST00000381867	human	ensembl	74_37	+1	known	missense	c.208	p.R70W	1.000	NULL	NULL	-	no_errors	SNPH	HGNC	ENSG00000101298				41	0	0	23	5	17.8571
PCSK2	0	genome.wustl.edu	37	20	17417441	17417441	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	17417441	17417441	C	T	SNP	PCSK2	ENST00000262545	human	ensembl	74_37	+1	known	silent	c.798	p.S266	0.922	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK2	HGNC	ENSG00000125851				79	0	0	38	20	34.4828
RALGAPA2	0	genome.wustl.edu	37	20	20586055	20586055	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	20586055	20586055	G	A	SNP	RALGAPA2	ENST00000202677	human	ensembl	74_37	-1	known	missense	c.1802	p.T601M	1.000	NULL	pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPA2	HGNC	ENSG00000188559				59	0	0	40	11	21.5686
TPX2	0	genome.wustl.edu	37	20	30370135	30370135	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	30370135	30370135	G	A	SNP	TPX2	ENST00000340513	human	ensembl	74_37	+1	known	missense	c.1246	p.A416T	1.000	pfam_TPX2_central_dom	pfam_TPX2_central_dom,pfam_Aurora-A-bd,pfam_TPX2_dom_C	-	no_errors	TPX2	HGNC	ENSG00000088325				293	0	0	170	51	23.0769
FOXS1	0	genome.wustl.edu	37	20	30433127	30433127	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	30433127	30433127	G	A	SNP	FOXS1	ENST00000375978	human	ensembl	74_37	-1	known	silent	c.219	p.N73	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXS1	HGNC	ENSG00000179772				81	0	0	56	15	21.1268
BPIFA3	0	genome.wustl.edu	37	20	31805219	31805219	+	RNA	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	31805219	31805219	G	T	SNP	BPIFA3	ENST00000471233	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.742	-	-	-	no_errors	BPIFA3	HGNC	ENSG00000131059				30	0	0	21	6	22.2222
MYL9	0	genome.wustl.edu	37	20	35176475	35176475	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	35176475	35176475	C	T	SNP	MYL9	ENST00000279022	human	ensembl	74_37	+1	known	silent	c.225	p.S75	0.587	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MYL9	HGNC	ENSG00000101335				43	0	0	29	6	17.1429
TGM2	0	genome.wustl.edu	37	20	36767986	36767986	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	36767986	36767986	C	T	SNP	TGM2	ENST00000361475	human	ensembl	74_37	-1	known	silent	c.1170	p.A390	0.044	NULL	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM2	HGNC	ENSG00000198959				119	0	0	63	19	23.1707
DHX35	0	genome.wustl.edu	37	20	37638972	37638972	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	37638972	37638972	T	C	SNP	DHX35	ENST00000252011	human	ensembl	74_37	+1	known	silent	c.1272	p.R424	0.970	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX35	HGNC	ENSG00000101452				172	0	0	100	27	21.2598
CDC25B	0	genome.wustl.edu	37	20	3780933	3780933	+	Splice_Site	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	3780933	3780933	A	C	SNP	CDC25B	ENST00000245960	human	ensembl	74_37	+1	known	splice_site	c.381-2	e4-2	1.000	-	-	-	no_errors	CDC25B	HGNC	ENSG00000101224				80	0	0	44	14	24.1379
MAVS	0	genome.wustl.edu	37	20	3844972	3844972	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	3844972	3844972	G	A	SNP	MAVS	ENST00000428216	human	ensembl	74_37	+1	known	missense	c.695	p.R232H	0.840	NULL	NULL	-	no_errors	MAVS	HGNC	ENSG00000088888				177	1	0.561798	96	31	24.4094
PTPRT	0	genome.wustl.edu	37	20	41306614	41306614	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	41306614	41306614	G	A	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.1045	p.H349Y	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				258	1	0.3861	145	41	22.043
SMOX	0	genome.wustl.edu	37	20	4164225	4164225	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	4164225	4164225	C	T	SNP	SMOX	ENST00000305958	human	ensembl	74_37	+1	known	missense	c.1454	p.T485M	1.000	pfam_Amino_oxidase	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_FAD_bind_dom	-	no_errors	SMOX	HGNC	ENSG00000088826				137	0	0	69	15	17.8571
ADRA1D	0	genome.wustl.edu	37	20	4229311	4229311	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	4229311	4229311	G	A	SNP	ADRA1D	ENST00000379453	human	ensembl	74_37	-1	known	silent	c.294	p.G98	0.859	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_ADRA1D_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	ADRA1D	HGNC	ENSG00000171873				8	0	0	8	5	38.4615
MYBL2	0	genome.wustl.edu	37	20	42302493	42302493	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	42302493	42302493	C	T	SNP	MYBL2	ENST00000217026	human	ensembl	74_37	+1	known	missense	c.68	p.P23L	0.963	NULL	pfam_C-myb_C,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL2	HGNC	ENSG00000101057				13	0	0	5	5	50
JPH2	0	genome.wustl.edu	37	20	42788479	42788479	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	42788479	42788479	G	A	SNP	JPH2	ENST00000372980	human	ensembl	74_37	-1	known	silent	c.948	p.G316	0.996	pfam_MORN,smart_MORN,pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH2	HGNC	ENSG00000149596				43	0	0	30	9	23.0769
HNF4A	0	genome.wustl.edu	37	20	43057109	43057109	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	43057109	43057109	C	T	SNP	HNF4A	ENST00000316099	human	ensembl	74_37	+1	known	nonsense	c.1264	p.R422*	0.997	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4A	HGNC	ENSG00000101076				57	0	0	32	10	23.8095
NEURL2	0	genome.wustl.edu	37	20	44518902	44518902	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	44518902	44518902	C	A	SNP	NEURL2	ENST00000372518	human	ensembl	74_37	-1	known	missense	c.729	p.Q243H	1.000	pfscan_Neu_Z	pfam_Neu_Z,pfam_SOCS_C,smart_Neu_Z,smart_SOCS_C,pfscan_Neu_Z,pfscan_SOCS_C	-	no_errors	NEURL2	HGNC	ENSG00000124257				76	0	0	54	10	15.625
ZNF334	0	genome.wustl.edu	37	20	45140720	45140720	+	Splice_Site	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	45140720	45140720	C	T	SNP	ZNF334	ENST00000347606	human	ensembl	74_37	-1	known	splice_site	c.21+1	e1+1	1.000	-	-	-	no_errors	ZNF334	HGNC	ENSG00000198185				132	0	0	95	27	22.1311
PRNP	0	genome.wustl.edu	37	20	4680491	4680491	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	4680491	4680491	G	A	SNP	PRNP	ENST00000379440	human	ensembl	74_37	+1	known	missense	c.625	p.V209M	0.542	pfam_Prion/Doppel_prot_b-ribbon_dom,superfamily_Prion/Doppel_prot_b-ribbon_dom,smart_Prion,prints_Prion	pfam_Prion/Doppel_prot_b-ribbon_dom,pfam_Prion_N_dom,superfamily_Prion/Doppel_prot_b-ribbon_dom,smart_Prion,prints_Prion	-	no_errors	PRNP	HGNC	ENSG00000171867				114	1	0.869565	90	8	8.16327
FAM65C	0	genome.wustl.edu	37	20	49214161	49214161	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	49214161	49214161	G	A	SNP	FAM65C	ENST00000535356	human	ensembl	74_37	-1	known	silent	c.1746	p.F582	0.007	NULL	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062				18	0	0	26	8	23.5294
MOCS3	0	genome.wustl.edu	37	20	49576679	49576679	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	49576679	49576679	T	C	SNP	MOCS3	ENST00000244051	human	ensembl	74_37	+1	known	silent	c.1300	p.L434	0.983	pfam_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	pfam_ThiF_NAD_FAD-bd,pfam_MoeZ_MoeB,pfam_Rhodanese-like_dom,superfamily_Molybdenum_cofac_synth_MoeB,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	-	no_errors	MOCS3	HGNC	ENSG00000124217				170	0	0	105	42	28.5714
KCNG1	0	genome.wustl.edu	37	20	49626567	49626567	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	49626567	49626567	G	A	SNP	KCNG1	ENST00000371571	human	ensembl	74_37	-1	known	silent	c.309	p.N103	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv6	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG1	HGNC	ENSG00000026559				69	0	0	30	11	26.8293
ZFP64	0	genome.wustl.edu	37	20	50768821	50768821	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	50768821	50768821	T	C	SNP	ZFP64	ENST00000216923	human	ensembl	74_37	-1	known	missense	c.1910	p.N637S	0.121	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP64	HGNC	ENSG00000020256				149	0	0	82	20	19.6078
ZFP64	0	genome.wustl.edu	37	20	50769100	50769100	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	50769100	50769100	C	T	SNP	ZFP64	ENST00000216923	human	ensembl	74_37	-1	known	missense	c.1631	p.R544H	0.970	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP64	HGNC	ENSG00000020256				60	0	0	46	12	20.6897
ZFP64	0	genome.wustl.edu	37	20	50769117	50769117	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	50769117	50769117	G	T	SNP	ZFP64	ENST00000216923	human	ensembl	74_37	-1	known	missense	c.1614	p.S538R	0.987	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP64	HGNC	ENSG00000020256				57	0	0	38	6	13.6364
CSTF1	0	genome.wustl.edu	37	20	54978560	54978560	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	54978560	54978560	A	G	SNP	CSTF1	ENST00000217109	human	ensembl	74_37	+1	known	missense	c.1073	p.Q358R	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CSTF1	HGNC	ENSG00000101138				96	0	0	55	15	21.4286
CTCFL	0	genome.wustl.edu	37	20	56078505	56078505	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	56078505	56078505	G	A	SNP	CTCFL	ENST00000423479	human	ensembl	74_37	-1	known	silent	c.1827	p.A609	0.088	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCFL	HGNC	ENSG00000124092				246	0	0	143	44	23.5294
CDH4	0	genome.wustl.edu	37	20	60348097	60348097	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	60348097	60348097	T	C	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	silent	c.435	p.S145	0.000	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242				54	0	0	21	9	30
CDH4	0	genome.wustl.edu	37	20	60498692	60498692	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	60498692	60498692	G	A	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	missense	c.1558	p.V520M	0.425	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242				70	0	0	40	11	21.5686
MTG2	0	genome.wustl.edu	37	20	60770906	60770906	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	60770906	60770906	G	A	SNP	MTG2	ENST00000370823	human	ensembl	74_37	+1	known	missense	c.253	p.G85R	0.998	pfam_GTP1_OBG_dom,superfamily_GTP1_OBG_dom,pirsf_GTP-bd_Obg/CgtA,tigrfam_GTP-bd_Obg/CgtA	pfam_GTP1_OBG_dom,pfam_GTP_binding_domain,pfam_Fe2_transport_prot_B_N,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GTP1_OBG_dom,pirsf_GTP-bd_Obg/CgtA,prints_GTP_binding_domain,tigrfam_GTP-bd_Obg/CgtA,tigrfam_Small_GTP-bd_dom	-	no_errors	MTG2	HGNC	ENSG00000101181				74	0	0	39	8	17.0213
DIDO1	0	genome.wustl.edu	37	20	61510982	61510982	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	61510982	61510982	G	A	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.6326	p.A2109V	0.005	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191				231	1	0.431034	115	34	22.8188
DIDO1	0	genome.wustl.edu	37	20	61512957	61512957	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	61512957	61512957	C	A	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.4351	p.D1451Y	0.033	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191				189	0	0	108	39	26.5306
NKAIN4	0	genome.wustl.edu	37	20	61881322	61881322	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	61881322	61881322	C	A	SNP	NKAIN4	ENST00000370316	human	ensembl	74_37	-1	known	missense	c.157	p.G53C	0.998	pfam_Na/K-Atpase_Interacting	pfam_Na/K-Atpase_Interacting	-	no_errors	NKAIN4	HGNC	ENSG00000101198				40	0	0	25	9	26.4706
ARFGAP1	0	genome.wustl.edu	37	20	61907543	61907543	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	61907543	61907543	T	G	SNP	ARFGAP1	ENST00000353546	human	ensembl	74_37	+1	known	missense	c.161	p.V54G	0.998	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ARFGAP1	HGNC	ENSG00000101199				71	0	0	46	17	26.9841
HELZ2	0	genome.wustl.edu	37	20	62194495	62194495	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	62194495	62194495	C	T	SNP	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	missense	c.5680	p.G1894S	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589				21	0	0	7	3	30
RTEL1	0	genome.wustl.edu	37	20	62321137	62321137	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	62321137	62321137	C	T	SNP	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	missense	c.2060	p.A687V	1.000	superfamily_P-loop_NTPase,smart_ATP-dep_Helicase_C,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366				30	0	0	16	5	23.8095
ZNF512B	0	genome.wustl.edu	37	20	62591325	62591325	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	62591325	62591325	G	A	SNP	ZNF512B	ENST00000217130	human	ensembl	74_37	-1	known	silent	c.2595	p.D865	0.338	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF512B	HGNC	ENSG00000196700				99	0	0	63	20	24.0964
TCEA2	0	genome.wustl.edu	37	20	62701593	62701593	+	RNA	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	62701593	62701593	G	T	SNP	TCEA2	ENST00000465111	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TCEA2	HGNC	ENSG00000171703				93	0	0	75	21	21.875
SRXN1	0	genome.wustl.edu	37	20	629410	629410	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	629410	629410	G	A	SNP	SRXN1	ENST00000381962	human	ensembl	74_37	-1	known	missense	c.362	p.T121I	1.000	pfam_ParB/Sulfiredoxin_dom,superfamily_ParB/Sulfiredoxin_dom,smart_ParB/Sulfiredoxin_dom,pirsf_Sulfiredoxin	pfam_ParB/Sulfiredoxin_dom,superfamily_ParB/Sulfiredoxin_dom,smart_ParB/Sulfiredoxin_dom,pirsf_Sulfiredoxin	-	no_errors	SRXN1	HGNC	ENSG00000271303				220	0	0	115	34	22.8188
BMP2	0	genome.wustl.edu	37	20	6759236	6759236	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	6759236	6759236	G	T	SNP	BMP2	ENST00000378827	human	ensembl	74_37	+1	known	missense	c.691	p.A231S	0.880	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP2	HGNC	ENSG00000125845				72	0	0	39	7	15.2174
PAK7	0	genome.wustl.edu	37	20	9520201	9520201	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	9520201	9520201	T	C	SNP	PAK7	ENST00000353224	human	ensembl	74_37	-1	known	missense	c.2068	p.T690A	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom	-	no_errors	PAK7	HGNC	ENSG00000101349				423	0	0	257	77	23.0539
BAGE2	0	genome.wustl.edu	37	21	11038824	11038824	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	11038824	11038824	G	A	SNP	BAGE2	ENST00000470054	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BAGE2	HGNC	ENSG00000187172				504	0	0	487	27	5.25292
BAGE2	0	genome.wustl.edu	37	21	11098732	11098732	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	11098732	11098732	C	T	SNP	BAGE2	ENST00000470054	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	BAGE2	HGNC	ENSG00000187172				96	0	0	77	11	12.5
ADAMTS5	0	genome.wustl.edu	37	21	28305340	28305340	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	28305340	28305340	T	C	SNP	ADAMTS5	ENST00000284987	human	ensembl	74_37	-1	known	silent	c.1713	p.G571	0.081	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS5,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS5	HGNC	ENSG00000154736				47	0	0	35	6	14.6341
LTN1	0	genome.wustl.edu	37	21	30324485	30324485	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	30324485	30324485	T	C	SNP	LTN1	ENST00000389194	human	ensembl	74_37	-1	known	missense	c.3479	p.E1160G	1.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_ARM-type_fold,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	LTN1	HGNC	ENSG00000198862				102	0	0	80	23	22.3301
KRTAP19-5	0	genome.wustl.edu	37	21	31874344	31874344	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	31874344	31874344	C	T	SNP	KRTAP19-5	ENST00000334151	human	ensembl	74_37	-1	known	missense	c.65	p.G22D	1.000	pfam_KRTAP_type6/8/16/19/20	pfam_KRTAP_type6/8/16/19/20	-	no_errors	KRTAP19-5	HGNC	ENSG00000186977				133	0	0	90	23	20.354
TIAM1	0	genome.wustl.edu	37	21	32513434	32513434	+	Splice_Site	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	32513434	32513434	A	G	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	splice_site	c.3774+2	e19+2	1.000	-	-	-	no_errors	TIAM1	HGNC	ENSG00000156299				92	0	0	69	20	22.4719
SCAF4	0	genome.wustl.edu	37	21	33044413	33044413	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	33044413	33044413	A	C	SNP	SCAF4	ENST00000286835	human	ensembl	74_37	-1	known	missense	c.2743	p.F915V	1.000	NULL	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304				63	0	0	51	8	13.5593
HUNK	0	genome.wustl.edu	37	21	33340661	33340661	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	33340661	33340661	C	T	SNP	HUNK	ENST00000270112	human	ensembl	74_37	+1	known	missense	c.974	p.T325M	0.618	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HUNK	HGNC	ENSG00000142149				129	0	0	106	31	22.6277
CRYZL1	0	genome.wustl.edu	37	21	34971554	34971554	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	34971554	34971554	G	A	SNP	CRYZL1	ENST00000381554	human	ensembl	74_37	-1	known	missense	c.578	p.A193V	1.000	pfam_ADH_C,smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	CRYZL1	HGNC	ENSG00000205758				96	0	0	88	22	20
RUNX1	0	genome.wustl.edu	37	21	36252918	36252918	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	36252918	36252918	G	A	SNP	RUNX1	ENST00000300305	human	ensembl	74_37	-1	known	silent	c.444	p.T148	0.416	pfam_Runt_dom,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_Runt_dom,prints_AML1_Runt	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX1	HGNC	ENSG00000159216				68	0	0	51	19	27.1429
CHAF1B	0	genome.wustl.edu	37	21	37788576	37788576	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	37788576	37788576	C	T	SNP	CHAF1B	ENST00000314103	human	ensembl	74_37	+1	known	missense	c.1592	p.T531M	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Gprotein_B	-	no_errors	CHAF1B	HGNC	ENSG00000159259				38	0	0	34	7	17.0732
KCNJ15	0	genome.wustl.edu	37	21	39671314	39671314	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	39671314	39671314	A	G	SNP	KCNJ15	ENST00000328656	human	ensembl	74_37	+1	known	missense	c.131	p.D44G	1.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.3	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.3,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.1	-	no_errors	KCNJ15	HGNC	ENSG00000157551				178	0	0	115	35	23.3333
ETS2	0	genome.wustl.edu	37	21	40194777	40194777	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	40194777	40194777	C	T	SNP	ETS2	ENST00000360214	human	ensembl	74_37	+1	known	silent	c.1374	p.H458	0.997	pirsf_Transform_prot_C-ets	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pirsf_Transform_prot_C-ets,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETS2	HGNC	ENSG00000157557				51	0	0	28	8	22.2222
IGSF5	0	genome.wustl.edu	37	21	41151166	41151166	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	41151166	41151166	T	C	SNP	IGSF5	ENST00000380588	human	ensembl	74_37	+1	novel	missense	c.868	p.C290R	0.006	NULL	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	IGSF5	HGNC	ENSG00000183067				58	0	0	52	13	20
DSCAM	0	genome.wustl.edu	37	21	41416171	41416171	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	41416171	41416171	C	T	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	silent	c.5217	p.G1739	0.516	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587				51	0	0	36	8	18.1818
BACE2	0	genome.wustl.edu	37	21	42647470	42647470	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	42647470	42647470	G	A	SNP	BACE2	ENST00000330333	human	ensembl	74_37	+1	known	silent	c.1476	p.L492	0.734	NULL	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Pept_A1_BACE,prints_Pept_A1_BACE2,prints_Aspartic_peptidase,prints_Pept_A1_BACE1	-	no_errors	BACE2	HGNC	ENSG00000182240				90	0	0	61	22	26.506
TMPRSS2	0	genome.wustl.edu	37	21	42866364	42866364	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	42866364	42866364	C	T	SNP	TMPRSS2	ENST00000398585	human	ensembl	74_37	-1	known	missense	c.268	p.A90T	0.003	NULL	pfam_Peptidase_S1,pfam_SRCR,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_LDrepeatLR_classA_rpt,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS2	HGNC	ENSG00000184012				80	0	0	57	20	25.974
RRP1B	0	genome.wustl.edu	37	21	45107917	45107917	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	45107917	45107917	C	T	SNP	RRP1B	ENST00000340648	human	ensembl	74_37	+1	known	silent	c.1662	p.P554	0.000	NULL	pfam_Nop52	-	no_errors	RRP1B	HGNC	ENSG00000160208				23	0	0	20	6	23.0769
PWP2	0	genome.wustl.edu	37	21	45540348	45540348	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	45540348	45540348	C	T	SNP	PWP2	ENST00000291576	human	ensembl	74_37	+1	known	silent	c.1308	p.D436	0.896	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_SSU_processome_Utp12,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PWP2	HGNC	ENSG00000241945				216	1	0.460829	150	32	17.5824
AIRE	0	genome.wustl.edu	37	21	45711065	45711065	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	45711065	45711065	C	A	SNP	AIRE	ENST00000291582	human	ensembl	74_37	+1	known	missense	c.967	p.L323M	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Sp100,pfam_Znf_PHD-finger,pfam_SAND_dom,superfamily_Znf_FYVE_PHD,superfamily_SAND_dom-like,smart_SAND_dom,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_SAND_dom,prints_AIRE	-	no_errors	AIRE	HGNC	ENSG00000160224				43	0	0	37	13	26
KRTAP10-9	0	genome.wustl.edu	37	21	46047185	46047185	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	46047185	46047185	G	A	SNP	KRTAP10-9	ENST00000397911	human	ensembl	74_37	+1	known	missense	c.97	p.A33T	0.002	NULL	NULL	-	no_errors	KRTAP10-9	HGNC	ENSG00000221837				52	0	0	43	18	29.5082
KRTAP10-10	0	genome.wustl.edu	37	21	46057386	46057386	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	46057386	46057386	C	T	SNP	KRTAP10-10	ENST00000380095	human	ensembl	74_37	+1	known	missense	c.52	p.R18W	0.989	NULL	NULL	-	no_errors	KRTAP10-10	HGNC	ENSG00000221859				156	1	0.636943	125	29	18.8312
COL6A1	0	genome.wustl.edu	37	21	47423577	47423577	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	47423577	47423577	G	A	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	missense	c.2737	p.A913T	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156				59	0	0	41	8	16.3265
MCM3AP	0	genome.wustl.edu	37	21	47697478	47697478	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	47697478	47697478	G	A	SNP	MCM3AP	ENST00000291688	human	ensembl	74_37	-1	known	silent	c.1821	p.Y607	1.000	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	MCM3AP	HGNC	ENSG00000160294				208	0	0	139	47	25.2688
IL17RA	0	genome.wustl.edu	37	22	17581248	17581248	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	17581248	17581248	C	T	SNP	IL17RA	ENST00000319363	human	ensembl	74_37	+1	known	missense	c.427	p.R143C	0.724	NULL	pfam_SEFIR	-	no_errors	IL17RA	HGNC	ENSG00000177663				290	1	0.343643	240	61	20.2658
CECR1	0	genome.wustl.edu	37	22	17688177	17688177	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	17688177	17688177	G	A	SNP	CECR1	ENST00000262607	human	ensembl	74_37	-1	known	missense	c.326	p.A109V	1.000	tigrfam_Ad_deam-like	pfam_A/AMP_deaminase_dom,pfam_A_deaminase_N,tigrfam_Ad_deam-like	-	no_errors	CECR1	HGNC	ENSG00000093072				101	0	0	77	24	23.7624
CECR1	0	genome.wustl.edu	37	22	17690434	17690434	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	17690434	17690434	C	T	SNP	CECR1	ENST00000262607	human	ensembl	74_37	-1	known	missense	c.134	p.R45Q	0.000	pfam_A_deaminase_N,tigrfam_Ad_deam-like	pfam_A/AMP_deaminase_dom,pfam_A_deaminase_N,tigrfam_Ad_deam-like	-	no_errors	CECR1	HGNC	ENSG00000093072				53	0	0	45	17	27.4194
DGCR5	0	genome.wustl.edu	37	22	18975310	18975310	+	RNA	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	18975310	18975310	A	G	SNP	DGCR5	ENST00000421572	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.825	-	-	-	no_errors	DGCR5	HGNC	ENSG00000237517				35	0	0	30	10	25
SEPT5	0	genome.wustl.edu	37	22	19709399	19709399	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	19709399	19709399	C	T	SNP	SEPT5	ENST00000383045	human	ensembl	74_37	+1	known	missense	c.896	p.T299M	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT5	HGNC	ENSG00000184702				70	0	0	54	15	21.7391
COMT	0	genome.wustl.edu	37	22	19956143	19956143	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	19956143	19956143	C	T	SNP	COMT	ENST00000361682	human	ensembl	74_37	+1	known	missense	c.700	p.R234C	0.997	pirsf_Catechol_O-MeTrfase_euk	pfam_O-MeTrfase_3,pirsf_Catechol_O-MeTrfase_euk	-	no_errors	COMT	HGNC	ENSG00000093010				69	0	0	51	16	23.8806
PI4KA	0	genome.wustl.edu	37	22	21082088	21082088	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	21082088	21082088	C	T	SNP	PI4KA	ENST00000255882	human	ensembl	74_37	-1	known	missense	c.4747	p.V1583I	1.000	superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PI4KA	HGNC	ENSG00000241973				114	0	0	67	17	20.2381
LZTR1	0	genome.wustl.edu	37	22	21343941	21343941	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	21343941	21343941	C	T	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	silent	c.621	p.L207	0.978	NULL	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	LZTR1	HGNC	ENSG00000099949				42	0	0	35	7	16.6667
BCR	0	genome.wustl.edu	37	22	23653915	23653915	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	23653915	23653915	C	T	SNP	BCR	ENST00000305877	human	ensembl	74_37	+1	known	missense	c.3214	p.R1072C	0.998	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Bcr-Abl_oncoprot_oligo,pfam_DH-domain,pfam_C2_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_Bcr-Abl_oncoprot_oligo,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	BCR	HGNC	ENSG00000186716				34	0	0	38	7	15.5556
ZNF70	0	genome.wustl.edu	37	22	24086165	24086165	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	24086165	24086165	C	T	SNP	ZNF70	ENST00000341976	human	ensembl	74_37	-1	known	missense	c.1163	p.G388D	0.681	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF70	HGNC	ENSG00000187792				186	0	0	149	72	32.5792
SNRPD3	0	genome.wustl.edu	37	22	24964007	24964007	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	24964007	24964007	T	C	SNP	SNRPD3	ENST00000439775	human	ensembl	74_37	+1	known	splice_site	c.180+2	e2+2	0.998	-	-	-	no_errors	SNRPD3	HGNC	ENSG00000100028				125	1	0.793651	97	28	22.4
MYO18B	0	genome.wustl.edu	37	22	26423370	26423370	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	26423370	26423370	C	T	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.7430	p.T2477M	0.006	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454				82	0	0	81	25	23.5849
SEZ6L	0	genome.wustl.edu	37	22	26747187	26747187	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	26747187	26747187	G	A	SNP	SEZ6L	ENST00000248933	human	ensembl	74_37	+1	known	silent	c.2577	p.T859	0.140	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L	HGNC	ENSG00000100095				124	0	0	80	25	23.8095
MTMR3	0	genome.wustl.edu	37	22	30413941	30413941	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	30413941	30413941	G	A	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	missense	c.1700	p.R567H	1.000	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330				181	0	0	117	37	24.026
TBC1D10A	0	genome.wustl.edu	37	22	30691728	30691728	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	30691728	30691728	G	A	SNP	TBC1D10A	ENST00000215790	human	ensembl	74_37	-1	known	silent	c.522	p.H174	0.777	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D10A	HGNC	ENSG00000099992				43	0	0	25	7	21.875
GAL3ST1	0	genome.wustl.edu	37	22	30951416	30951416	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	30951416	30951416	G	A	SNP	GAL3ST1	ENST00000338911	human	ensembl	74_37	-1	known	silent	c.796	p.L266	1.000	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST1	HGNC	ENSG00000128242				82	0	0	80	15	15.7895
INPP5J	0	genome.wustl.edu	37	22	31524009	31524009	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	31524009	31524009	C	T	SNP	INPP5J	ENST00000331075	human	ensembl	74_37	+1	known	silent	c.1860	p.I620	0.812	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	-	no_errors	INPP5J	HGNC	ENSG00000185133				43	0	0	23	10	30.303
PLA2G3	0	genome.wustl.edu	37	22	31534345	31534345	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	31534345	31534345	G	A	SNP	PLA2G3	ENST00000215885	human	ensembl	74_37	-1	known	silent	c.699	p.G233	0.993	pfam_PLipase_A2,superfamily_PLipase_A2_dom	pfam_PLipase_A2,superfamily_PLipase_A2_dom	-	no_errors	PLA2G3	HGNC	ENSG00000100078				53	0	0	35	13	27.0833
PISD	0	genome.wustl.edu	37	22	32017120	32017120	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	32017120	32017120	A	G	SNP	PISD	ENST00000439502	human	ensembl	74_37	-1	known	missense	c.706	p.C236R	0.000	pfam_PS_Dcarbxylase,tigrfam_PS_decarb	pfam_PS_Dcarbxylase,tigrfam_PS_decarb	-	no_errors	PISD	HGNC	ENSG00000241878				91	0	0	55	21	27.6316
DEPDC5	0	genome.wustl.edu	37	22	32200207	32200207	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	32200207	32200207	A	G	SNP	DEPDC5	ENST00000266091	human	ensembl	74_37	+1	known	missense	c.1141	p.K381E	1.000	pfam_IML1	pfam_IML1,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC5	HGNC	ENSG00000100150				190	0	0	131	36	21.5569
DEPDC5	0	genome.wustl.edu	37	22	32302427	32302427	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	32302427	32302427	C	T	SNP	DEPDC5	ENST00000266091	human	ensembl	74_37	+1	known	missense	c.4690	p.R1564W	1.000	NULL	pfam_IML1,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC5	HGNC	ENSG00000100150				284	0	0	213	43	16.7969
HMOX1	0	genome.wustl.edu	37	22	35783055	35783055	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	35783055	35783055	T	A	SNP	HMOX1	ENST00000216117	human	ensembl	74_37	+1	known	missense	c.522	p.S174R	0.346	pfam_Haem_Oase-like,superfamily_Haem_Oase-like_multi-hlx,pirsf_Haem_Oase,prints_Haem_Oase	pfam_Haem_Oase-like,superfamily_Haem_Oase-like_multi-hlx,pirsf_Haem_Oase,prints_Haem_Oase	-	no_errors	HMOX1	HGNC	ENSG00000100292				145	0	0	115	24	17.2662
APOL3	0	genome.wustl.edu	37	22	36541536	36541536	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	36541536	36541536	G	A	SNP	APOL3	ENST00000349314	human	ensembl	74_37	-1	known	missense	c.335	p.A112V	0.000	pfam_ApoL	pfam_ApoL	-	no_errors	APOL3	HGNC	ENSG00000128284				98	0	0	65	23	26.1364
CSF2RB	0	genome.wustl.edu	37	22	37334294	37334294	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	37334294	37334294	T	A	SNP	CSF2RB	ENST00000262825	human	ensembl	74_37	+1	known	missense	c.2462	p.V821D	0.997	pirsf_IL3_rcpt_beta	pirsf_IL3_rcpt_beta,pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CSF2RB	HGNC	ENSG00000100368				189	1	0.526316	144	48	25
KCNJ4	0	genome.wustl.edu	37	22	38823826	38823826	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	38823826	38823826	G	A	SNP	KCNJ4	ENST00000303592	human	ensembl	74_37	-1	known	silent	c.312	p.G104	0.066	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.3	-	no_errors	KCNJ4	HGNC	ENSG00000168135				39	0	0	20	8	28.5714
CACNA1I	0	genome.wustl.edu	37	22	40066157	40066157	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	40066157	40066157	T	C	SNP	CACNA1I	ENST00000336649	human	ensembl	74_37	+1	known	missense	c.4327	p.C1443R	1.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC	ENSG00000100346				173	0	0	128	43	25.1462
CACNA1I	0	genome.wustl.edu	37	22	40066850	40066850	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	40066850	40066850	G	A	SNP	CACNA1I	ENST00000336649	human	ensembl	74_37	+1	known	missense	c.4448	p.R1483Q	1.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC	ENSG00000100346				127	0	0	89	26	22.6087
FAM83F	0	genome.wustl.edu	37	22	40417465	40417465	+	Silent	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	40417465	40417465	T	G	SNP	FAM83F	ENST00000333407	human	ensembl	74_37	+1	known	silent	c.951	p.T317	0.012	NULL	pfam_DUF1669	-	no_errors	FAM83F	HGNC	ENSG00000133477				189	0	0	124	33	21.0191
TNRC6B	0	genome.wustl.edu	37	22	40661673	40661673	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	40661673	40661673	C	T	SNP	TNRC6B	ENST00000454349	human	ensembl	74_37	+1	known	missense	c.1439	p.T480M	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354				50	0	0	29	14	32.5581
MKL1	0	genome.wustl.edu	37	22	40815358	40815358	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	40815358	40815358	G	A	SNP	MKL1	ENST00000355630	human	ensembl	74_37	-1	known	nonsense	c.1084	p.R362*	1.000	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL1	HGNC	ENSG00000196588				48	0	0	38	6	13.6364
XPNPEP3	0	genome.wustl.edu	37	22	41322429	41322429	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	41322429	41322429	A	G	SNP	XPNPEP3	ENST00000357137	human	ensembl	74_37	+1	known	missense	c.1514	p.Q505R	0.034	NULL	pfam_Pept_M24_structural-domain,pfam_Aminopep_P_N,superfamily_Pept_M24_structural-domain	-	no_errors	XPNPEP3	HGNC	ENSG00000196236				200	0	0	176	33	15.7895
ZC3H7B	0	genome.wustl.edu	37	22	41716681	41716681	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	41716681	41716681	G	A	SNP	ZC3H7B	ENST00000351589	human	ensembl	74_37	+1	known	missense	c.17	p.R6Q	1.000	NULL	pfam_Znf_CCCH,pfam_TPR_1,smart_TPR_repeat,smart_Znf_CCCH,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ZC3H7B	HGNC	ENSG00000100403				161	0	0	112	21	15.7895
SMDT1	0	genome.wustl.edu	37	22	42475806	42475806	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	42475806	42475806	G	T	SNP	SMDT1	ENST00000331479	human	ensembl	74_37	+1	known	missense	c.34	p.A12S	0.011	NULL	pfam_UPF0466	-	no_errors	SMDT1	HGNC	ENSG00000183172				45	0	0	26	7	21.2121
ARHGAP8	0	genome.wustl.edu	37	22	45210627	45210627	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	45210627	45210627	G	A	SNP	ARHGAP8	ENST00000447333	human	ensembl	74_37	+1	known	missense	c.436	p.A146T	0.937	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	ARHGAP8	HGNC	ENSG00000241484				121	0	0	85	22	20.5607
PHF21B	0	genome.wustl.edu	37	22	45309814	45309814	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	45309814	45309814	G	A	SNP	PHF21B	ENST00000313237	human	ensembl	74_37	-1	known	missense	c.719	p.T240M	0.232	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21B	HGNC	ENSG00000056487				121	0	0	84	13	13.4021
RIBC2	0	genome.wustl.edu	37	22	45818285	45818285	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	45818285	45818285	C	T	SNP	RIBC2	ENST00000538017	human	ensembl	74_37	+1	known	silent	c.657	p.S219	0.635	pfam_RIB43A	pfam_RIB43A	-	no_errors	RIBC2	HGNC	ENSG00000128408				237	0	0	173	50	22.4215
CELSR1	0	genome.wustl.edu	37	22	46765660	46765660	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	46765660	46765660	C	T	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.7801	p.D2601N	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				65	0	0	57	5	8.06452
PANX2	0	genome.wustl.edu	37	22	50615711	50615711	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	50615711	50615711	C	T	SNP	PANX2	ENST00000395842	human	ensembl	74_37	+1	known	silent	c.570	p.R190	0.806	pfam_Innexin,pfscan_Innexin	pfam_Innexin,pfscan_Innexin	-	no_errors	PANX2	HGNC	ENSG00000073150				23	0	0	15	9	37.5
ABI3BP	0	genome.wustl.edu	37	3	100469446	100469446	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	100469446	100469446	T	C	SNP	ABI3BP	ENST00000284322	human	ensembl	74_37	-1	known	missense	c.3121	p.R1041G	1.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	ABI3BP	HGNC	ENSG00000154175				207	0	0	135	48	26.2295
TRMT10C	0	genome.wustl.edu	37	3	101284698	101284698	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	101284698	101284698	G	A	SNP	TRMT10C	ENST00000309922	human	ensembl	74_37	+1	known	missense	c.1073	p.R358H	1.000	pfam_tRNA_m1G_MeTrfase	pfam_tRNA_m1G_MeTrfase	-	no_errors	TRMT10C	HGNC	ENSG00000174173				89	0	0	72	29	28.7129
NXPE3	0	genome.wustl.edu	37	3	101535714	101535714	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	101535714	101535714	C	T	SNP	NXPE3	ENST00000273347	human	ensembl	74_37	+1	known	missense	c.998	p.P333L	1.000	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE3	HGNC	ENSG00000144815				208	0	0	183	45	19.7368
ATP2B2	0	genome.wustl.edu	37	3	10387766	10387766	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	10387766	10387766	G	A	SNP	ATP2B2	ENST00000352432	human	ensembl	74_37	-1	known	silent	c.2460	p.D820	0.912	pfam_HAD-like_dom,superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B2	HGNC	ENSG00000157087				33	0	0	27	13	32.5
MORC1	0	genome.wustl.edu	37	3	108776228	108776228	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	108776228	108776228	C	T	SNP	MORC1	ENST00000232603	human	ensembl	74_37	-1	known	missense	c.1137	p.M379I	1.000	NULL	pfam_Znf_CW,superfamily_HATPase_ATP-bd,pfscan_Znf_CW	-	no_errors	MORC1	HGNC	ENSG00000114487				219	0	0	161	39	19.5
DPPA4	0	genome.wustl.edu	37	3	109049561	109049561	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	109049561	109049561	T	C	SNP	DPPA4	ENST00000335658	human	ensembl	74_37	-1	known	silent	c.489	p.T163	0.000	NULL	NULL	-	no_errors	DPPA4	HGNC	ENSG00000121570				141	0	0	121	25	17.1233
DPPA4	0	genome.wustl.edu	37	3	109050783	109050783	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	109050783	109050783	T	C	SNP	DPPA4	ENST00000335658	human	ensembl	74_37	-1	known	missense	c.274	p.N92D	0.000	NULL	NULL	-	no_errors	DPPA4	HGNC	ENSG00000121570				206	0	0	168	52	23.6364
PHLDB2	0	genome.wustl.edu	37	3	111693410	111693410	+	Nonstop_Mutation	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	111693410	111693410	G	C	SNP	PHLDB2	ENST00000393925	human	ensembl	74_37	+1	known	nonstop	c.3762	p.*1254Y	0.541	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB2	HGNC	ENSG00000144824				141	0	0	97	40	29.1971
HRH1	0	genome.wustl.edu	37	3	11301400	11301400	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	11301400	11301400	T	G	SNP	HRH1	ENST00000397056	human	ensembl	74_37	+1	known	missense	c.677	p.L226R	0.994	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H1_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H1_rcpt,prints_GPCR_Rhodpsn,prints_Musac_Ach_rcpt	-	no_errors	HRH1	HGNC	ENSG00000196639				157	0	0	108	71	39.6648
ATG7	0	genome.wustl.edu	37	3	11382179	11382179	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	11382179	11382179	T	C	SNP	ATG7	ENST00000354449	human	ensembl	74_37	+1	known	missense	c.950	p.V317A	1.000	tigrfam_Atg7	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_Atg7	-	no_errors	ATG7	HGNC	ENSG00000197548				64	0	0	69	10	12.6582
ZBTB20	0	genome.wustl.edu	37	3	114057858	114057858	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	114057858	114057858	G	A	SNP	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	silent	c.2220	p.D740	0.997	pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				186	0	0	116	38	24.6753
ZBTB20	0	genome.wustl.edu	37	3	114070178	114070178	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	114070178	114070178	C	T	SNP	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	silent	c.747	p.A249	0.669	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				99	0	0	83	17	17
POGLUT1	0	genome.wustl.edu	37	3	119198976	119198976	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	119198976	119198976	A	G	SNP	POGLUT1	ENST00000295588	human	ensembl	74_37	+1	known	missense	c.535	p.T179A	1.000	pfam_LipoPS_modifying,smart_LipoPS_modifying	pfam_LipoPS_modifying,smart_LipoPS_modifying	-	no_errors	POGLUT1	HGNC	ENSG00000163389				204	1	0.487805	107	30	21.8978
TIMMDC1	0	genome.wustl.edu	37	3	119222428	119222428	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	119222428	119222428	G	A	SNP	TIMMDC1	ENST00000494664	human	ensembl	74_37	+1	known	missense	c.410	p.R137H	1.000	pfam_Tim17/Tim22/Tim23/PMP24	pfam_Tim17/Tim22/Tim23/PMP24	-	no_errors	TIMMDC1	HGNC	ENSG00000113845				40	0	0	24	3	11.1111
POLQ	0	genome.wustl.edu	37	3	121158877	121158877	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	121158877	121158877	G	A	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	missense	c.7351	p.P2451S	1.000	pfam_DNA-dir_DNA_pol_A_palm_dom,smart_DNA-dir_DNA_pol_A_palm_dom	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341				172	0	0	124	29	18.9542
CASR	0	genome.wustl.edu	37	3	121980496	121980496	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	121980496	121980496	G	A	SNP	CASR	ENST00000498619	human	ensembl	74_37	+1	known	missense	c.614	p.R205H	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	CASR	HGNC	ENSG00000036828				234	0	0	187	70	27.2374
PDIA5	0	genome.wustl.edu	37	3	122864423	122864423	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	122864423	122864423	T	G	SNP	PDIA5	ENST00000316218	human	ensembl	74_37	+1	known	missense	c.965	p.L322R	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,pfam_AhpC/TSA,superfamily_Thioredoxin-like_fold,prints_Thioredoxin	-	no_errors	PDIA5	HGNC	ENSG00000065485				66	0	0	55	6	9.83607
KALRN	0	genome.wustl.edu	37	3	123946846	123946846	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	123946846	123946846	G	A	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.77	p.R26Q	1.000	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145				258	0	0	207	38	15.5102
HEG1	0	genome.wustl.edu	37	3	124709815	124709815	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	124709815	124709815	T	C	SNP	HEG1	ENST00000311127	human	ensembl	74_37	-1	known	missense	c.3668	p.Y1223C	1.000	smart_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HEG1	HGNC	ENSG00000173706				10	0	0	7	2	22.2222
RAF1	0	genome.wustl.edu	37	3	12660191	12660191	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	12660191	12660191	C	T	SNP	RAF1	ENST00000442415	human	ensembl	74_37	-1	known	silent	c.30	p.T10	0.975	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	RAF1	HGNC	ENSG00000132155				89	0	0	75	22	22.6804
PLXNA1	0	genome.wustl.edu	37	3	126746844	126746844	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	126746844	126746844	G	A	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	missense	c.4424	p.G1475D	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				62	0	0	57	14	19.7183
LOC653712	0	genome.wustl.edu	37	3	128584202	128584202	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	128584202	128584202	G	A	SNP	LOC653712	ENST00000480931	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-723O4.2	Clone_based_vega_gene	ENSG00000231305				68	0	0	45	16	26.2295
COL6A5	0	genome.wustl.edu	37	3	130162359	130162359	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	130162359	130162359	C	T	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	missense	c.6527	p.A2176V	0.008	NULL	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752				105	0	0	73	23	23.9583
ASTE1	0	genome.wustl.edu	37	3	130743595	130743595	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	130743595	130743595	T	C	SNP	ASTE1	ENST00000264992	human	ensembl	74_37	-1	known	missense	c.556	p.I186V	0.000	NULL	pfam_XPG_DNA_repair_N	-	no_errors	ASTE1	HGNC	ENSG00000034533				167	0	0	131	35	21.0843
PRR23B	0	genome.wustl.edu	37	3	138739139	138739139	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	138739139	138739139	A	G	SNP	PRR23B	ENST00000329447	human	ensembl	74_37	-1	known	missense	c.365	p.L122P	0.001	pfam_UPF0572	pfam_UPF0572	-	no_errors	PRR23B	HGNC	ENSG00000184814				75	0	0	51	12	19.0476
CHST2	0	genome.wustl.edu	37	3	142840602	142840602	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	142840602	142840602	C	T	SNP	CHST2	ENST00000309575	human	ensembl	74_37	+1	known	missense	c.944	p.A315V	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST2	HGNC	ENSG00000175040				14	0	0	7	5	41.6667
GRIP2	0	genome.wustl.edu	37	3	14564529	14564529	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	14564529	14564529	G	A	SNP	GRIP2	ENST00000273083	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRIP2	HGNC	ENSG00000144596				123	0	0	99	19	16.1017
GRIP2	0	genome.wustl.edu	37	3	14564548	14564548	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	14564548	14564548	C	T	SNP	GRIP2	ENST00000273083	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.433	-	-	-	no_errors	GRIP2	HGNC	ENSG00000144596				129	0	0	76	49	39.2
C3orf20	0	genome.wustl.edu	37	3	14769959	14769959	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	14769959	14769959	T	C	SNP	C3orf20	ENST00000253697	human	ensembl	74_37	+1	known	silent	c.1704	p.I568	0.008	NULL	NULL	-	no_errors	C3orf20	HGNC	ENSG00000131379				99	0	0	83	18	17.8218
FGD5	0	genome.wustl.edu	37	3	14863039	14863039	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	14863039	14863039	G	A	SNP	FGD5	ENST00000285046	human	ensembl	74_37	+1	known	missense	c.2461	p.V821M	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD5	HGNC	ENSG00000154783				100	0	0	92	27	22.6891
SIAH2	0	genome.wustl.edu	37	3	150460061	150460061	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	150460061	150460061	C	T	SNP	SIAH2	ENST00000312960	human	ensembl	74_37	-1	known	missense	c.842	p.R281H	0.999	pfam_7-in-absentia-prot_TRAF-dom,superfamily_TRAF-like	pfam_7-in-absentia-prot_TRAF-dom,superfamily_TRAF-like,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	SIAH2	HGNC	ENSG00000181788				105	0	0	91	33	26.6129
GPR87	0	genome.wustl.edu	37	3	151012131	151012131	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	151012131	151012131	G	A	SNP	GPR87	ENST00000260843	human	ensembl	74_37	-1	known	silent	c.903	p.F301	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_P2Y13_rcpt,prints_P2Y14_rcpt	-	no_errors	GPR87	HGNC	ENSG00000138271				252	0	0	171	40	18.9573
LXN	0	genome.wustl.edu	37	3	158387236	158387236	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	158387236	158387236	G	A	SNP	LXN	ENST00000264265	human	ensembl	74_37	-1	known	missense	c.356	p.A119V	1.000	pfam_Prot_inh_latexin,pirsf_Prot_inh_latexin	pfam_Prot_inh_latexin,pirsf_Prot_inh_latexin	-	no_errors	LXN	HGNC	ENSG00000079257				148	0	0	78	31	28.4404
RFTN1	0	genome.wustl.edu	37	3	16419565	16419565	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	16419565	16419565	T	C	SNP	RFTN1	ENST00000334133	human	ensembl	74_37	-1	known	missense	c.486	p.I162M	0.168	NULL	NULL	-	no_errors	RFTN1	HGNC	ENSG00000131378				51	0	0	52	24	31.5789
GHSR	0	genome.wustl.edu	37	3	172163150	172163150	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	172163150	172163150	C	T	SNP	GHSR	ENST00000241256	human	ensembl	74_37	-1	known	missense	c.902	p.S301N	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GHS-R,prints_GPCR_Rhodpsn	-	no_errors	GHSR	HGNC	ENSG00000121853				149	0	0	128	34	20.9877
TBC1D5	0	genome.wustl.edu	37	3	17255739	17255739	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	17255739	17255739	C	T	SNP	TBC1D5	ENST00000253692	human	ensembl	74_37	-1	known	missense	c.1712	p.R571H	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D5	HGNC	ENSG00000131374				117	0	0	96	48	33.3333
MCF2L2	0	genome.wustl.edu	37	3	182947567	182947567	+	Silent	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	182947567	182947567	T	A	SNP	MCF2L2	ENST00000328913	human	ensembl	74_37	-1	known	silent	c.1932	p.G644	0.356	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2L2	HGNC	ENSG00000053524				203	0	0	160	36	18.3673
B3GNT5	0	genome.wustl.edu	37	3	182988259	182988259	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	182988259	182988259	C	T	SNP	B3GNT5	ENST00000326505	human	ensembl	74_37	+1	known	missense	c.673	p.R225C	0.818	pfam_Glyco_trans_31,superfamily_Luciferase-like_dom	pfam_Glyco_trans_31,superfamily_Luciferase-like_dom	-	no_errors	B3GNT5	HGNC	ENSG00000176597				307	0	0	216	66	23.4043
CLDN16	0	genome.wustl.edu	37	3	190127782	190127782	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	190127782	190127782	G	A	SNP	CLDN16	ENST00000264734	human	ensembl	74_37	+1	known	missense	c.875	p.R292H	0.725	NULL	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin16,prints_Claudin	-	no_errors	CLDN16	HGNC	ENSG00000113946				150	0	0	95	37	28.0303
TMEM207	0	genome.wustl.edu	37	3	190158096	190158096	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	190158096	190158096	G	A	SNP	TMEM207	ENST00000354905	human	ensembl	74_37	-1	known	nonsense	c.241	p.R81*	0.000	NULL	NULL	-	no_errors	TMEM207	HGNC	ENSG00000198398				65	0	0	38	10	20.8333
TMEM44	0	genome.wustl.edu	37	3	194344358	194344358	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	194344358	194344358	G	A	SNP	TMEM44	ENST00000392432	human	ensembl	74_37	-1	known	missense	c.425	p.P142L	0.962	NULL	NULL	-	no_errors	TMEM44	HGNC	ENSG00000145014				53	0	0	28	11	28.2051
BDH1	0	genome.wustl.edu	37	3	197273282	197273282	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	197273282	197273282	T	C	SNP	BDH1	ENST00000358186	human	ensembl	74_37	-1	known	silent	c.33	p.S11	0.920	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	BDH1	HGNC	ENSG00000161267				183	0	0	154	33	17.6471
RARB	0	genome.wustl.edu	37	3	25622169	25622169	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	25622169	25622169	G	A	SNP	RARB	ENST00000404969	human	ensembl	74_37	+1	known	missense	c.763	p.A255T	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARB	HGNC	ENSG00000077092				90	0	0	62	40	39.2157
STT3B	0	genome.wustl.edu	37	3	31621466	31621466	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	31621466	31621466	G	A	SNP	STT3B	ENST00000295770	human	ensembl	74_37	+1	known	missense	c.589	p.A197T	1.000	pfam_Oligo_trans_STT3	pfam_Oligo_trans_STT3	-	no_errors	STT3B	HGNC	ENSG00000163527				334	0	0	271	65	19.3452
TRIM71	0	genome.wustl.edu	37	3	32932581	32932581	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	32932581	32932581	C	T	SNP	TRIM71	ENST00000383763	human	ensembl	74_37	+1	known	missense	c.1885	p.R629C	1.000	pfam_NHL_repeat,pfscan_NHL_repeat_subgr	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM71	HGNC	ENSG00000206557				44	0	0	19	24	55.814
GOLGA4	0	genome.wustl.edu	37	3	37367422	37367422	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	37367422	37367422	T	A	SNP	GOLGA4	ENST00000361924	human	ensembl	74_37	+1	known	missense	c.4045	p.S1349T	0.022	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,superfamily_t-SNARE,superfamily_Prefoldin,smart_GRIP,pfscan_GRIP	-	no_errors	GOLGA4	HGNC	ENSG00000144674				65	0	0	32	33	50.7692
ITGA9	0	genome.wustl.edu	37	3	37523078	37523078	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	37523078	37523078	C	T	SNP	ITGA9	ENST00000264741	human	ensembl	74_37	+1	known	missense	c.524	p.T175M	0.531	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA9	HGNC	ENSG00000144668				224	0	0	93	91	49.4565
SCN10A	0	genome.wustl.edu	37	3	38763811	38763811	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	38763811	38763811	C	T	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.3445	p.V1149M	1.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				138	0	0	67	65	49.2424
SCN11A	0	genome.wustl.edu	37	3	38892065	38892065	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	38892065	38892065	C	A	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	nonsense	c.4234	p.E1412*	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356				292	0	0	211	61	22.4265
CCDC13	0	genome.wustl.edu	37	3	42794103	42794103	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	42794103	42794103	C	T	SNP	CCDC13	ENST00000310232	human	ensembl	74_37	-1	known	silent	c.477	p.K159	1.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC13	HGNC	ENSG00000244607				116	0	0	49	46	48.4211
KIF15	0	genome.wustl.edu	37	3	44828026	44828026	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	44828026	44828026	C	T	SNP	KIF15	ENST00000326047	human	ensembl	74_37	+1	known	missense	c.599	p.A200V	0.996	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF15	HGNC	ENSG00000163808				118	0	0	51	47	47.9592
DHX30	0	genome.wustl.edu	37	3	47890175	47890175	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	47890175	47890175	C	T	SNP	DHX30	ENST00000445061	human	ensembl	74_37	+1	known	silent	c.2637	p.T879	0.017	pfam_Helicase-assoc_dom,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX30	HGNC	ENSG00000132153				67	0	0	34	34	50
ITPR1	0	genome.wustl.edu	37	3	4810193	4810193	+	Splice_Site	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	4810193	4810193	A	T	SNP	ITPR1	ENST00000302640	human	ensembl	74_37	+1	known	splice_site	c.5681-2	e43-2	0.991	-	-	-	no_errors	ITPR1	HGNC	ENSG00000150995				56	0	0	45	23	33.8235
CCDC51	0	genome.wustl.edu	37	3	48476334	48476334	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	48476334	48476334	G	A	SNP	CCDC51	ENST00000395694	human	ensembl	74_37	-1	known	missense	c.205	p.H69Y	0.144	NULL	NULL	-	no_errors	CCDC51	HGNC	ENSG00000164051				130	0	0	58	55	48.6726
ATRIP	0	genome.wustl.edu	37	3	48506346	48506346	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	48506346	48506346	G	A	SNP	ATRIP	ENST00000320211	human	ensembl	74_37	+1	known	silent	c.2172	p.V724	0.992	NULL	NULL	-	no_errors	ATRIP	HGNC	ENSG00000164053				61	0	0	39	24	38.0952
COL7A1	0	genome.wustl.edu	37	3	48623373	48623373	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	48623373	48623373	C	A	SNP	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	missense	c.3759	p.K1253N	1.000	pfam_Collagen	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270				183	0	0	76	73	48.9933
IP6K2	0	genome.wustl.edu	37	3	48732686	48732686	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	48732686	48732686	G	A	SNP	IP6K2	ENST00000328631	human	ensembl	74_37	-1	known	silent	c.39	p.R13	0.006	NULL	pfam_IPK	-	no_errors	IP6K2	HGNC	ENSG00000068745				97	0	0	40	33	45.2055
P4HTM	0	genome.wustl.edu	37	3	49042326	49042326	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	49042326	49042326	T	G	SNP	P4HTM	ENST00000343546	human	ensembl	74_37	+1	known	missense	c.920	p.I307S	1.000	smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	P4HTM	HGNC	ENSG00000178467				106	0	0	53	44	45.3608
DALRD3	0	genome.wustl.edu	37	3	49054740	49054740	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	49054740	49054740	A	G	SNP	DALRD3	ENST00000341949	human	ensembl	74_37	-1	known	missense	c.848	p.V283A	1.000	NULL	pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,smart_DALR_anticod-bd	-	no_errors	DALRD3	HGNC	ENSG00000178149				168	0	0	71	62	46.6165
USP19	0	genome.wustl.edu	37	3	49147938	49147938	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	49147938	49147938	A	G	SNP	USP19	ENST00000398888	human	ensembl	74_37	-1	known	silent	c.3489	p.G1163	0.007	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_MYND,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom,pfscan_Znf_MYND,pfscan_Peptidase_C19/C67	-	no_errors	USP19	HGNC	ENSG00000172046				120	1	0.826446	78	14	15.2174
USP19	0	genome.wustl.edu	37	3	49149374	49149374	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	49149374	49149374	C	T	SNP	USP19	ENST00000398888	human	ensembl	74_37	-1	known	missense	c.2564	p.R855H	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_MYND,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom,pfscan_Znf_MYND,pfscan_Peptidase_C19/C67	-	no_errors	USP19	HGNC	ENSG00000172046				72	0	0	38	15	28.3019
ACY1	0	genome.wustl.edu	37	3	52021432	52021432	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	52021432	52021432	G	T	SNP	ACY1	ENST00000458031	human	ensembl	74_37	+1	known	missense	c.1085	p.S362I	0.997	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,tigrfam_N-acyl_aa_amidohydrolase	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,tigrfam_N-acyl_aa_amidohydrolase	-	no_errors	ACY1	HGNC	ENSG00000243989				54	0	0	59	4	6.34921
STAB1	0	genome.wustl.edu	37	3	52551981	52551981	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	52551981	52551981	G	A	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.4723	p.V1575M	0.705	superfamily_FAS1_domain,smart_EG-like_dom,pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327				90	0	0	53	33	38.3721
ITIH1	0	genome.wustl.edu	37	3	52824813	52824813	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	52824813	52824813	C	T	SNP	ITIH1	ENST00000273283	human	ensembl	74_37	+1	known	silent	c.2370	p.D790	0.000	pfam_ITI_HC_C,superfamily_PsdUridine_synth_cat_dom	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,superfamily_PsdUridine_synth_cat_dom,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH1	HGNC	ENSG00000055957				266	0	0	133	131	49.6212
CACNA1D	0	genome.wustl.edu	37	3	53694205	53694205	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	53694205	53694205	C	T	SNP	CACNA1D	ENST00000288139	human	ensembl	74_37	+1	known	silent	c.669	p.G223	0.998	pfam_Ion_trans_dom,prints_LVDCC_a1dsu	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_LVDCC_a1dsu	-	no_errors	CACNA1D	HGNC	ENSG00000157388				109	0	0	77	13	14.4444
LRTM1	0	genome.wustl.edu	37	3	54952711	54952711	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	54952711	54952711	G	A	SNP	LRTM1	ENST00000273286	human	ensembl	74_37	-1	known	silent	c.813	p.C271	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM1	HGNC	ENSG00000144771				75	0	0	31	36	53.7313
ACOX2	0	genome.wustl.edu	37	3	58519212	58519212	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	58519212	58519212	G	A	SNP	ACOX2	ENST00000302819	human	ensembl	74_37	-1	known	silent	c.543	p.H181	1.000	pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX2	HGNC	ENSG00000168306				176	0	0	153	34	18.1818
PTPRG	0	genome.wustl.edu	37	3	62258734	62258734	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	62258734	62258734	G	A	SNP	PTPRG	ENST00000474889	human	ensembl	74_37	+1	known	missense	c.3296	p.R1099H	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRG	HGNC	ENSG00000144724				102	0	0	71	15	17.4419
PSMD6	0	genome.wustl.edu	37	3	64004505	64004505	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	64004505	64004505	G	T	SNP	PSMD6	ENST00000295901	human	ensembl	74_37	-1	known	missense	c.706	p.L236I	1.000	pfam_26S_proteasome_reg_su-Rpn7	pfam_26S_proteasome_reg_su-Rpn7,pfam_PCI_dom,smart_PCI_dom	-	no_errors	PSMD6	HGNC	ENSG00000163636				165	0	0	127	33	20.625
MITF	0	genome.wustl.edu	37	3	69928397	69928397	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	69928397	69928397	C	T	SNP	MITF	ENST00000448226	human	ensembl	74_37	+1	known	missense	c.217	p.R73C	1.000	NULL	pfam_bHLH_ZIP_TF_MiT/TFE,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MITF	HGNC	ENSG00000187098				86	0	0	70	20	22.2222
FOXP1	0	genome.wustl.edu	37	3	71015109	71015109	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	71015109	71015109	G	A	SNP	FOXP1	ENST00000318789	human	ensembl	74_37	-1	known	silent	c.1821	p.N607	0.955	NULL	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	-	no_errors	FOXP1	HGNC	ENSG00000114861				346	0	0	303	81	21.0938
PDZRN3	0	genome.wustl.edu	37	3	73432878	73432878	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	73432878	73432878	C	T	SNP	PDZRN3	ENST00000263666	human	ensembl	74_37	-1	known	missense	c.2839	p.A947T	1.000	NULL	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	PDZRN3	HGNC	ENSG00000121440				56	0	0	40	12	23.0769
CNTN3	0	genome.wustl.edu	37	3	74474011	74474011	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	74474011	74474011	G	A	SNP	CNTN3	ENST00000263665	human	ensembl	74_37	-1	known	missense	c.439	p.P147S	1.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN3	HGNC	ENSG00000113805				46	0	0	40	7	14.8936
EPHA3	0	genome.wustl.edu	37	3	89499405	89499405	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	89499405	89499405	G	A	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	missense	c.2575	p.D859N	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524				110	0	0	83	19	18.6275
EPHA6	0	genome.wustl.edu	37	3	96706210	96706210	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	96706210	96706210	C	T	SNP	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	missense	c.487	p.P163S	1.000	pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224				188	0	0	140	36	20.4545
BRPF1	0	genome.wustl.edu	37	3	9780731	9780731	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	9780731	9780731	C	T	SNP	BRPF1	ENST00000383829	human	ensembl	74_37	+1	known	silent	c.648	p.D216	1.000	pfam_Enhancer_polycomb-like_N	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRPF1	HGNC	ENSG00000156983				78	0	0	45	34	43.038
OR5H2	0	genome.wustl.edu	37	3	98002130	98002130	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	98002130	98002130	A	G	SNP	OR5H2	ENST00000355273	human	ensembl	74_37	+1	known	silent	c.399	p.K133	0.974	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5H2	HGNC	ENSG00000197938				206	0	0	178	37	17.2093
ADH5	0	genome.wustl.edu	37	4	100006300	100006300	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	100006300	100006300	A	G	SNP	ADH5	ENST00000296412	human	ensembl	74_37	-1	known	missense	c.80	p.V27A	1.000	superfamily_GroES-like,tigrfam_ADH_3	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,tigrfam_ADH_3	-	no_errors	ADH5	HGNC	ENSG00000197894				15	0	0	19	2	9.52381
DDIT4L	0	genome.wustl.edu	37	4	101109133	101109133	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	101109133	101109133	G	A	SNP	DDIT4L	ENST00000273990	human	ensembl	74_37	-1	known	missense	c.283	p.L95F	0.999	pfam_RTP801-like	pfam_RTP801-like	-	no_errors	DDIT4L	HGNC	ENSG00000145358				207	0	0	202	30	12.931
MANBA	0	genome.wustl.edu	37	4	103555971	103555971	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	103555971	103555971	C	T	SNP	MANBA	ENST00000226578	human	ensembl	74_37	-1	known	missense	c.2389	p.V797M	0.000	NULL	pfam_Glyco_hydro_2_N,pfam_Glyco_hydro_2_TIM,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,superfamily_Glyco_hydro_2_Ig-like	-	no_errors	MANBA	HGNC	ENSG00000109323				118	0	0	69	18	20.6897
LEF1	0	genome.wustl.edu	37	4	108969924	108969924	+	RNA	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	108969924	108969924	T	C	SNP	LEF1	ENST00000503879	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.597	-	-	-	no_errors	LEF1	HGNC	ENSG00000138795				71	0	0	64	12	15.7895
SEC24B	0	genome.wustl.edu	37	4	110451569	110451569	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	110451569	110451569	G	T	SNP	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	silent	c.3201	p.A1067	0.004	pfam_Sec23/24_helical_dom,superfamily_Sec23/24_helical_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802				175	0	0	143	51	26.2887
CCDC109B	0	genome.wustl.edu	37	4	110605647	110605647	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	110605647	110605647	C	A	SNP	CCDC109B	ENST00000394650	human	ensembl	74_37	+1	known	missense	c.661	p.L221M	0.975	pfam_Coiled-coil-dom_prot_109_C	pfam_Coiled-coil-dom_prot_109_C	-	no_errors	CCDC109B	HGNC	ENSG00000005059				114	0	0	83	27	24.5455
LRIT3	0	genome.wustl.edu	37	4	110791250	110791250	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	110791250	110791250	A	G	SNP	LRIT3	ENST00000594814	human	ensembl	74_37	+1	known	missense	c.1345	p.K449E	0.968	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIT3	HGNC	ENSG00000183423				148	0	0	88	24	21.4286
NEUROG2	0	genome.wustl.edu	37	4	113436263	113436263	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	113436263	113436263	G	A	SNP	NEUROG2	ENST00000313341	human	ensembl	74_37	-1	known	silent	c.369	p.N123	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NEUROG2	HGNC	ENSG00000178403				81	0	0	59	17	22.3684
ARSJ	0	genome.wustl.edu	37	4	114823740	114823740	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	114823740	114823740	T	C	SNP	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	missense	c.1490	p.N497S	1.000	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801				131	0	0	92	36	28.125
SYNPO2	0	genome.wustl.edu	37	4	119951141	119951141	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	119951141	119951141	C	T	SNP	SYNPO2	ENST00000307142	human	ensembl	74_37	+1	known	missense	c.1211	p.A404V	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2	HGNC	ENSG00000172403				224	0	0	150	59	28.2297
CTBP1-AS2	0	genome.wustl.edu	37	4	1244943	1244943	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	1244943	1244943	G	A	SNP	CTBP1-AS2	ENST00000357591	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTBP1-AS2	HGNC	ENSG00000196810				39	0	0	46	10	17.8571
ANKRD50	0	genome.wustl.edu	37	4	125592090	125592090	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	125592090	125592090	C	T	SNP	ANKRD50	ENST00000504087	human	ensembl	74_37	-1	known	missense	c.2342	p.G781D	0.997	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD50	HGNC	ENSG00000151458				214	0	0	176	41	18.894
FAT4	0	genome.wustl.edu	37	4	126372844	126372844	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	126372844	126372844	T	C	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.10673	p.F3558S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				347	0	0	241	59	19.6667
FAT4	0	genome.wustl.edu	37	4	126389930	126389930	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	126389930	126389930	T	G	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.12163	p.S4055A	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				248	0	0	155	55	26.1905
MAEA	0	genome.wustl.edu	37	4	1305821	1305821	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	1305821	1305821	C	T	SNP	MAEA	ENST00000303400	human	ensembl	74_37	+1	known	missense	c.124	p.R42W	1.000	NULL	smart_LisH_dimerisation,smart_CTLH_C,smart_CRA_dom,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	MAEA	HGNC	ENSG00000090316				50	0	0	33	15	31.25
PCDH10	0	genome.wustl.edu	37	4	134072704	134072704	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	134072704	134072704	T	C	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	missense	c.1409	p.V470A	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650				182	1	0.546448	144	31	17.7143
BOD1L1	0	genome.wustl.edu	37	4	13601693	13601693	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	13601693	13601693	G	A	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	silent	c.6831	p.G2277	0.001	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219				24	0	0	28	11	28.2051
ELMOD2	0	genome.wustl.edu	37	4	141446595	141446595	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	141446595	141446595	T	G	SNP	ELMOD2	ENST00000323570	human	ensembl	74_37	+1	known	missense	c.13	p.L5V	0.990	NULL	pfam_Engulfment_cell_motility_ELMO	-	no_errors	ELMOD2	HGNC	ENSG00000179387				287	0	0	188	63	25.0996
INPP4B	0	genome.wustl.edu	37	4	143067054	143067054	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	143067054	143067054	G	A	SNP	INPP4B	ENST00000509777	human	ensembl	74_37	-1	known	silent	c.1659	p.G553	0.000	NULL	superfamily_C2_dom	-	no_errors	INPP4B	HGNC	ENSG00000109452				283	1	0.352113	196	63	24.3243
POU4F2	0	genome.wustl.edu	37	4	147561385	147561385	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	147561385	147561385	G	A	SNP	POU4F2	ENST00000281321	human	ensembl	74_37	+1	known	missense	c.655	p.A219T	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F2	HGNC	ENSG00000151615				15	0	0	8	5	38.4615
LRBA	0	genome.wustl.edu	37	4	151749498	151749498	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	151749498	151749498	A	G	SNP	LRBA	ENST00000357115	human	ensembl	74_37	-1	known	missense	c.5005	p.S1669P	0.974	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC	ENSG00000198589				232	0	0	170	50	22.7273
PET112	0	genome.wustl.edu	37	4	152637228	152637228	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	152637228	152637228	C	T	SNP	PET112	ENST00000263985	human	ensembl	74_37	-1	known	silent	c.696	p.A232	0.789	pfam_Asn/Gln-tRNA_Trfase_suB/E_cat,tigrfam_Apn/Gln-ADT_bsu	pfam_Asn/Gln-tRNA_Trfase_suB/E_cat,pfam_Asn/Gln_amidotransferase,superfamily_Asn/Gln_tRNA_amidoTrfrase-rel,smart_Asn/Gln_amidotransferase,tigrfam_Apn/Gln-ADT_bsu	-	no_errors	PET112	HGNC	ENSG00000059691				72	0	0	49	15	23.4375
FBXW7	0	genome.wustl.edu	37	4	153249385	153249385	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	153249385	153249385	G	A	SNP	FBXW7	ENST00000281708	human	ensembl	74_37	-1	known	missense	c.1393	p.R465C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC	ENSG00000109670				402	0	0	295	67	18.5083
C1QTNF7	0	genome.wustl.edu	37	4	15437526	15437526	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	15437526	15437526	G	A	SNP	C1QTNF7	ENST00000429690	human	ensembl	74_37	+1	known	silent	c.159	p.G53	0.958	pfam_Collagen	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF7	HGNC	ENSG00000163145				78	0	0	44	17	27.8689
DCHS2	0	genome.wustl.edu	37	4	155163925	155163925	+	Splice_Site	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	155163925	155163925	C	T	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	splice_site	c.5577-1	e22-1	1.000	-	-	-	no_errors	DCHS2	HGNC	ENSG00000197410				124	0	0	91	19	17.2727
GRIA2	0	genome.wustl.edu	37	4	158284167	158284167	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	158284167	158284167	G	A	SNP	GRIA2	ENST00000264426	human	ensembl	74_37	+1	known	missense	c.2623	p.V875I	1.000	NULL	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA2	HGNC	ENSG00000120251				274	1	0.363636	214	63	22.7437
FNIP2	0	genome.wustl.edu	37	4	159782803	159782803	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	159782803	159782803	C	T	SNP	FNIP2	ENST00000379346	human	ensembl	74_37	+1	known	missense	c.1409	p.A470V	1.000	NULL	NULL	-	no_errors	FNIP2	HGNC	ENSG00000052795				210	0	0	131	49	27.2222
TMA16	0	genome.wustl.edu	37	4	164428219	164428219	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	164428219	164428219	A	G	SNP	TMA16	ENST00000358572	human	ensembl	74_37	+1	known	missense	c.38	p.E13G	1.000	pfam_Tma16	pfam_Tma16	-	no_errors	TMA16	HGNC	ENSG00000198498				14	0	0	7	4	36.3636
GLRA3	0	genome.wustl.edu	37	4	175580334	175580334	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	175580334	175580334	T	G	SNP	GLRA3	ENST00000274093	human	ensembl	74_37	-1	known	missense	c.942	p.K314N	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_Glycine_rcpt_A3,prints_Glycine_rcpt_A,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GLRA3	HGNC	ENSG00000145451				121	0	0	88	29	24.7863
LCORL	0	genome.wustl.edu	37	4	17963635	17963635	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	17963635	17963635	A	T	SNP	LCORL	ENST00000382226	human	ensembl	74_37	-1	known	missense	c.321	p.D107E	1.000	NULL	pfam_HTH_Psq,superfamily_Homeodomain-like,pfscan_HTH_Psq	-	no_errors	LCORL	HGNC	ENSG00000178177				89	0	0	70	21	23.0769
RWDD4	0	genome.wustl.edu	37	4	184577096	184577096	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	184577096	184577096	G	A	SNP	RWDD4	ENST00000326397	human	ensembl	74_37	-1	known	missense	c.43	p.R15C	1.000	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pfscan_RWD-domain	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pfscan_RWD-domain	-	no_errors	RWDD4	HGNC	ENSG00000182552				211	0	0	160	45	21.9512
ACSL1	0	genome.wustl.edu	37	4	185689450	185689450	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	185689450	185689450	C	A	SNP	ACSL1	ENST00000504900	human	ensembl	74_37	-1	putative	missense	c.1148	p.S383I	0.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL1	HGNC	ENSG00000151726				145	0	0	96	42	30.4348
FAM149A	0	genome.wustl.edu	37	4	187077204	187077204	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	187077204	187077204	G	A	SNP	FAM149A	ENST00000356371	human	ensembl	74_37	+1	known	missense	c.1307	p.R436H	0.000	NULL	pfam_DUF3719	-	no_errors	FAM149A	HGNC	ENSG00000109794				98	0	0	63	28	30.7692
ZFP42	0	genome.wustl.edu	37	4	188924074	188924074	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	188924074	188924074	C	T	SNP	ZFP42	ENST00000326866	human	ensembl	74_37	+1	known	missense	c.113	p.A38V	0.001	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP42	HGNC	ENSG00000179059				132	0	0	88	24	21.4286
WHSC1	0	genome.wustl.edu	37	4	1980497	1980497	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	1980497	1980497	G	A	SNP	WHSC1	ENST00000382891	human	ensembl	74_37	+1	known	missense	c.3959	p.R1320Q	0.048	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_box_dom,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_PWWP_dom,smart_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_box_dom	-	no_errors	WHSC1	HGNC	ENSG00000109685				85	0	0	54	11	16.9231
DHX15	0	genome.wustl.edu	37	4	24572442	24572442	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	24572442	24572442	C	T	SNP	DHX15	ENST00000336812	human	ensembl	74_37	-1	known	missense	c.536	p.R179Q	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606				98	0	0	90	34	27.4194
DHX15	0	genome.wustl.edu	37	4	24578185	24578185	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	24578185	24578185	G	A	SNP	DHX15	ENST00000336812	human	ensembl	74_37	-1	known	missense	c.188	p.A63V	1.000	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606				137	0	0	111	38	25.5034
SEL1L3	0	genome.wustl.edu	37	4	25849480	25849480	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	25849480	25849480	C	T	SNP	SEL1L3	ENST00000399878	human	ensembl	74_37	-1	known	missense	c.169	p.V57I	0.855	NULL	pfam_Sel1-like,superfamily_ConA-like_lec_gl_sf,smart_Sel1-like	-	no_errors	SEL1L3	HGNC	ENSG00000091490				42	0	0	34	8	19.0476
CCKAR	0	genome.wustl.edu	37	4	26487494	26487494	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	26487494	26487494	T	C	SNP	CCKAR	ENST00000295589	human	ensembl	74_37	-1	known	missense	c.391	p.N131D	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_CholecystokininA_recpt_N,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Cholcy_rcpt_A,prints_Cholcskin_rcpt,prints_GPCR_Rhodpsn,prints_Gastrin_rcpt,prints_NPY_rcpt	-	no_errors	CCKAR	HGNC	ENSG00000163394				58	0	0	39	4	9.30233
PCDH7	0	genome.wustl.edu	37	4	30724650	30724650	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	30724650	30724650	G	A	SNP	PCDH7	ENST00000543491	human	ensembl	74_37	+1	known	missense	c.1606	p.G536S	0.942	superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH7	HGNC	ENSG00000169851				75	0	0	53	21	28.3784
RGS12	0	genome.wustl.edu	37	4	3424203	3424203	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	3424203	3424203	C	T	SNP	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	missense	c.2939	p.A980V	0.690	pfam_Raf-like_ras-bd,smart_Raf-like_ras-bd,pfscan_Raf-like_ras-bd	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788				42	0	0	26	9	25.7143
TLR6	0	genome.wustl.edu	37	4	38830759	38830759	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	38830759	38830759	C	T	SNP	TLR6	ENST00000381950	human	ensembl	74_37	-1	known	silent	c.336	p.L112	0.002	pirsf_Toll-like_receptor,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,pfam_Cys-rich_flank_reg_C,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR6	HGNC	ENSG00000174130				124	0	0	101	34	25.1852
KCTD8	0	genome.wustl.edu	37	4	44177000	44177000	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	44177000	44177000	C	G	SNP	KCTD8	ENST00000360029	human	ensembl	74_37	-1	known	missense	c.1229	p.S410T	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD8	HGNC	ENSG00000183783				514	0	0	391	99	20.2041
ATP10D	0	genome.wustl.edu	37	4	47559796	47559796	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	47559796	47559796	A	C	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	missense	c.1940	p.E647A	0.821	superfamily_HAD-like_dom	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246				148	0	0	114	35	23.4899
STK32B	0	genome.wustl.edu	37	4	5458560	5458560	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	5458560	5458560	G	A	SNP	STK32B	ENST00000282908	human	ensembl	74_37	+1	known	silent	c.693	p.T231	0.227	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK32B	HGNC	ENSG00000152953				42	0	0	28	14	33.3333
PDGFRA	0	genome.wustl.edu	37	4	55146618	55146618	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	55146618	55146618	T	C	SNP	PDGFRA	ENST00000257290	human	ensembl	74_37	+1	known	silent	c.2292	p.R764	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRA	HGNC	ENSG00000134853				87	0	0	81	22	21.3592
EVC2	0	genome.wustl.edu	37	4	5620258	5620258	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	5620258	5620258	G	A	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	nonsense	c.2653	p.R885*	0.990	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040				66	0	0	34	10	22.7273
EVC2	0	genome.wustl.edu	37	4	5624349	5624349	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	5624349	5624349	C	T	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	missense	c.2416	p.V806M	0.166	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040				45	0	0	33	10	23.2558
MAN2B2	0	genome.wustl.edu	37	4	6610856	6610856	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	6610856	6610856	G	A	SNP	MAN2B2	ENST00000285599	human	ensembl	74_37	+1	known	missense	c.1837	p.V613M	0.008	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B2	HGNC	ENSG00000013288				68	0	0	52	11	17.4603
TMPRSS11B	0	genome.wustl.edu	37	4	69095169	69095169	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	69095169	69095169	C	T	SNP	TMPRSS11B	ENST00000332644	human	ensembl	74_37	-1	known	missense	c.752	p.R251Q	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_HAT/DESC1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_HAT/DESC1,pfscan_SEA_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS11B	HGNC	ENSG00000185873				131	0	0	126	29	18.7097
CSN3	0	genome.wustl.edu	37	4	71114945	71114945	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	71114945	71114945	T	C	SNP	CSN3	ENST00000304954	human	ensembl	74_37	+1	known	silent	c.318	p.T106	0.000	pfam_Casein_kappa,pirsf_Casein_kappa	pfam_Casein_kappa,pirsf_Casein_kappa	-	no_errors	CSN3	HGNC	ENSG00000171209				104	0	0	87	23	20.9091
CABS1	0	genome.wustl.edu	37	4	71201895	71201895	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	71201895	71201895	C	T	SNP	CABS1	ENST00000273936	human	ensembl	74_37	+1	known	missense	c.1139	p.T380M	0.239	NULL	NULL	-	no_errors	CABS1	HGNC	ENSG00000145309				153	0	0	126	36	22.2222
RUFY3	0	genome.wustl.edu	37	4	71672462	71672462	+	RNA	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	71672462	71672462	T	A	SNP	RUFY3	ENST00000507333	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RUFY3	HGNC	ENSG00000018189				73	0	0	71	16	18.3908
GC	0	genome.wustl.edu	37	4	72618297	72618297	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	72618297	72618297	G	A	SNP	GC	ENST00000273951	human	ensembl	74_37	-1	known	missense	c.1333	p.H445Y	0.001	pfam_VitD-bind_III,superfamily_Serum_albumin-like,prints_VitD-bd,prints_ALB/AFP/VDB	pfam_Serum_albumin_N,pfam_VitD-bind_III,superfamily_Serum_albumin-like,smart_Serum_albumin_N,prints_VitD-bd,prints_ALB/AFP/VDB	-	no_errors	GC	HGNC	ENSG00000145321				178	0	0	113	38	25.1656
USO1	0	genome.wustl.edu	37	4	76695833	76695833	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	76695833	76695833	T	C	SNP	USO1	ENST00000538159	human	ensembl	74_37	+1	known	missense	c.566	p.V189A	1.000	superfamily_ARM-type_fold	pfam_Vesicle_Uso1_P115_head,pfam_Uso1_p115_C,superfamily_ARM-type_fold,superfamily_t-SNARE	-	no_errors	USO1	HGNC	ENSG00000138768				89	0	0	76	13	14.6067
PPEF2	0	genome.wustl.edu	37	4	76793201	76793201	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	76793201	76793201	G	A	SNP	PPEF2	ENST00000286719	human	ensembl	74_37	-1	known	silent	c.1626	p.T542	1.000	pirsf_Ser/Thr-Pase_EF-hand_contain	pirsf_Ser/Thr-Pase_EF-hand_contain,pfam_PEstase_dom,pfam_PPP_dom,smart_Ser/Thr-sp_prot-phosphatase,smart_EF_hand_dom,prints_Ser/Thr-sp_prot-phosphatase,pfscan_EF_hand_dom	-	no_errors	PPEF2	HGNC	ENSG00000156194				217	0	0	124	30	19.4805
ABLIM2	0	genome.wustl.edu	37	4	8108356	8108356	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	8108356	8108356	G	A	SNP	ABLIM2	ENST00000447017	human	ensembl	74_37	-1	known	missense	c.19	p.P7S	0.992	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM2	HGNC	ENSG00000163995				22	0	0	16	5	23.8095
RASGEF1B	0	genome.wustl.edu	37	4	82377783	82377783	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	82377783	82377783	G	A	SNP	RASGEF1B	ENST00000436139	human	ensembl	74_37	-1	putative	missense	c.460	p.R154W	0.000	superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGEF1B	HGNC	ENSG00000138670				104	0	0	83	30	26.5487
SEC31A	0	genome.wustl.edu	37	4	83785682	83785682	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	83785682	83785682	G	A	SNP	SEC31A	ENST00000432794	human	ensembl	74_37	-1	known	nonsense	c.1267	p.Q423*	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31A	HGNC	ENSG00000138674				92	0	0	88	11	11.1111
THAP9	0	genome.wustl.edu	37	4	83838784	83838784	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	83838784	83838784	G	A	SNP	THAP9	ENST00000302236	human	ensembl	74_37	+1	known	silent	c.1419	p.L473	0.923	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP9	HGNC	ENSG00000168152				349	0	0	265	92	25.7703
WDFY3	0	genome.wustl.edu	37	4	85617311	85617311	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	85617311	85617311	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.8713	p.A2905T	1.000	pfam_BEACH_dom,superfamily_BEACH_dom,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625				215	0	0	144	43	22.9947
PTPN13	0	genome.wustl.edu	37	4	87696414	87696414	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	87696414	87696414	C	T	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	nonsense	c.5614	p.R1872*	1.000	pirsf_Tyr_Pase_non-rcpt_typ-13,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629				92	0	0	43	17	28.3333
DMP1	0	genome.wustl.edu	37	4	88584427	88584427	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	88584427	88584427	A	C	SNP	DMP1	ENST00000339673	human	ensembl	74_37	+1	known	missense	c.1497	p.K499N	0.995	pfam_DMP1	pfam_DMP1	-	no_errors	DMP1	HGNC	ENSG00000152592				253	1	0.393701	187	61	24.5968
SMARCAD1	0	genome.wustl.edu	37	4	95198191	95198191	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	95198191	95198191	C	T	SNP	SMARCAD1	ENST00000359052	human	ensembl	74_37	+1	known	missense	c.1963	p.L655F	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_UBA-like,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_CUE,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAD1	HGNC	ENSG00000163104				209	0	0	176	50	22.1239
PDHA2	0	genome.wustl.edu	37	4	96761471	96761471	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	96761471	96761471	C	T	SNP	PDHA2	ENST00000295266	human	ensembl	74_37	+1	known	missense	c.170	p.A57V	1.000	NULL	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	-	no_errors	PDHA2	HGNC	ENSG00000163114				79	0	0	59	14	19.1781
ST8SIA4	0	genome.wustl.edu	37	5	100222206	100222206	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	100222206	100222206	C	T	SNP	ST8SIA4	ENST00000231461	human	ensembl	74_37	-1	known	missense	c.344	p.R115H	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA4	HGNC	ENSG00000113532				226	1	0.440529	139	34	19.6532
GIN1	0	genome.wustl.edu	37	5	102444277	102444277	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	102444277	102444277	G	A	SNP	GIN1	ENST00000399004	human	ensembl	74_37	-1	known	silent	c.135	p.F45	1.000	NULL	pfam_Integrase_cat-core,pfam_Znf_H2C2_histone_UAS-bd,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	-	no_errors	GIN1	HGNC	ENSG00000145723				132	0	0	97	26	21.1382
FER	0	genome.wustl.edu	37	5	108380463	108380463	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	108380463	108380463	A	G	SNP	FER	ENST00000281092	human	ensembl	74_37	+1	known	missense	c.1796	p.Q599R	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_FCH_dom,superfamily_Kinase-like_dom,smart_FCH_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,pfscan_FCH_dom,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	FER	HGNC	ENSG00000151422				211	0	0	182	40	18.018
PJA2	0	genome.wustl.edu	37	5	108672997	108672997	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	108672997	108672997	C	A	SNP	PJA2	ENST00000361189	human	ensembl	74_37	-1	known	missense	c.2062	p.A688S	0.323	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PJA2	HGNC	ENSG00000198961				133	0	0	70	25	26.3158
DCP2	0	genome.wustl.edu	37	5	112328441	112328441	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	112328441	112328441	G	A	SNP	DCP2	ENST00000389063	human	ensembl	74_37	+1	known	missense	c.406	p.A136T	1.000	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	pfam_mRNA_decapping_BoxA,pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	DCP2	HGNC	ENSG00000172795				108	0	0	92	19	17.1171
CTNND2	0	genome.wustl.edu	37	5	11346489	11346489	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	11346489	11346489	A	T	SNP	CTNND2	ENST00000304623	human	ensembl	74_37	-1	known	missense	c.1623	p.D541E	0.992	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND2	HGNC	ENSG00000169862				148	0	0	99	17	14.6552
SEMA6A	0	genome.wustl.edu	37	5	115840539	115840539	+	Splice_Site	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	115840539	115840539	A	G	SNP	SEMA6A	ENST00000257414	human	ensembl	74_37	-1	known	splice_site	c.100+2	e1+2	1.000	-	-	-	no_errors	SEMA6A	HGNC	ENSG00000092421				22	0	0	15	5	25
SNCAIP	0	genome.wustl.edu	37	5	121780285	121780285	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	121780285	121780285	A	G	SNP	SNCAIP	ENST00000379533	human	ensembl	74_37	+1	known	missense	c.1591	p.T531A	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SNCAIP	HGNC	ENSG00000064692				171	0	0	135	30	18.1818
MEGF10	0	genome.wustl.edu	37	5	126769111	126769111	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	126769111	126769111	C	T	SNP	MEGF10	ENST00000274473	human	ensembl	74_37	+1	known	missense	c.1750	p.P584S	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF_laminin,pfam_EGF_extracell,superfamily_Proteinase_amylase_inhib_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF10	HGNC	ENSG00000145794				198	0	0	113	33	22.6027
RAPGEF6	0	genome.wustl.edu	37	5	130840422	130840422	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	130840422	130840422	T	C	SNP	RAPGEF6	ENST00000509018	human	ensembl	74_37	-1	known	missense	c.1151	p.E384G	1.000	superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom	pfam_RasGRF_CDC25,pfam_PDZ,pfam_Ras-assoc,pfam_cNMP-bd_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF6	HGNC	ENSG00000158987				138	0	0	114	37	24.5033
CDKL3	0	genome.wustl.edu	37	5	133695646	133695646	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	133695646	133695646	C	T	SNP	CDKL3	ENST00000265334	human	ensembl	74_37	-1	known	missense	c.302	p.R101Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDKL3	HGNC	ENSG00000006837				27	0	0	16	3	15.7895
SPOCK1	0	genome.wustl.edu	37	5	136834163	136834163	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	136834163	136834163	C	T	SNP	SPOCK1	ENST00000282223	human	ensembl	74_37	-1	known	missense	c.85	p.G29R	0.398	NULL	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK1	HGNC	ENSG00000152377				9	0	0	8	8	50
FAM53C	0	genome.wustl.edu	37	5	137682483	137682483	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	137682483	137682483	C	A	SNP	FAM53C	ENST00000239906	human	ensembl	74_37	+1	known	silent	c.1014	p.P338	1.000	NULL	NULL	-	no_errors	FAM53C	HGNC	ENSG00000120709				80	0	0	70	23	24.7312
MATR3	0	genome.wustl.edu	37	5	138643309	138643309	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	138643309	138643309	G	A	SNP	MATR3	ENST00000361059	human	ensembl	74_37	+1	known	missense	c.205	p.A69T	1.000	NULL	smart_Znf_U1,smart_RRM_dom,pfscan_Znf_C2H2_matrin,pfscan_RRM_dom	-	no_errors	MATR3	HGNC	ENSG00000015479				233	0	0	156	61	28.1106
NRG2	0	genome.wustl.edu	37	5	139235336	139235336	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	139235336	139235336	A	G	SNP	NRG2	ENST00000545385	human	ensembl	74_37	-1	known	missense	c.1223	p.V408A	1.000	pfam_Neuregulin_1_C	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_EG-like_dom,pfscan_Ig-like_dom	-	no_errors	NRG2	HGNC	ENSG00000158458				137	1	0.724638	111	23	17.1642
PCDHA1	0	genome.wustl.edu	37	5	140167303	140167303	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140167303	140167303	G	A	SNP	PCDHA1	ENST00000504120	human	ensembl	74_37	+1	known	silent	c.1428	p.T476	0.849	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970				128	0	0	88	30	25.4237
PCDHA1	0	genome.wustl.edu	37	5	140167617	140167617	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140167617	140167617	T	C	SNP	PCDHA1	ENST00000504120	human	ensembl	74_37	+1	known	missense	c.1742	p.V581A	1.000	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970				137	0	0	94	19	16.8142
PCDHA2	0	genome.wustl.edu	37	5	140175140	140175140	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140175140	140175140	G	A	SNP	PCDHA2	ENST00000526136	human	ensembl	74_37	+1	known	silent	c.591	p.G197	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969				179	1	0.555556	139	35	20.1149
PCDHA2	0	genome.wustl.edu	37	5	140175673	140175673	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140175673	140175673	C	T	SNP	PCDHA2	ENST00000526136	human	ensembl	74_37	+1	known	missense	c.1124	p.S375L	0.008	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969				155	0	0	110	32	22.5352
PCDHA4	0	genome.wustl.edu	37	5	140188759	140188759	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140188759	140188759	G	A	SNP	PCDHA4	ENST00000530339	human	ensembl	74_37	+1	known	missense	c.1987	p.A663T	0.989	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA4	HGNC	ENSG00000204967				95	0	0	71	22	23.6559
PCDHA5	0	genome.wustl.edu	37	5	140203164	140203164	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140203164	140203164	T	C	SNP	PCDHA5	ENST00000529859	human	ensembl	74_37	+1	known	missense	c.1804	p.Y602H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA5	HGNC	ENSG00000204965				68	0	0	61	21	25.6098
PCDHA6	0	genome.wustl.edu	37	5	140209139	140209139	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140209139	140209139	C	T	SNP	PCDHA6	ENST00000529310	human	ensembl	74_37	+1	known	missense	c.1463	p.A488V	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA6	HGNC	ENSG00000081842				95	0	0	70	18	20.4545
PCDHA9	0	genome.wustl.edu	37	5	140229360	140229360	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140229360	140229360	C	T	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	missense	c.1280	p.A427V	0.996	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961				155	0	0	101	32	24.0602
PCDHA11	0	genome.wustl.edu	37	5	140250297	140250297	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140250297	140250297	C	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	missense	c.1609	p.R537S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158				112	0	0	92	31	25.2033
PCDHA13	0	genome.wustl.edu	37	5	140263587	140263587	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140263587	140263587	C	T	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	silent	c.1734	p.S578	0.648	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389				75	0	0	76	24	24
PCDHAC2	0	genome.wustl.edu	37	5	140347691	140347691	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140347691	140347691	C	T	SNP	PCDHAC2	ENST00000289269	human	ensembl	74_37	+1	known	missense	c.1340	p.P447L	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC2	HGNC	ENSG00000243232				224	0	0	156	58	27.1028
PCDHB6	0	genome.wustl.edu	37	5	140532163	140532163	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140532163	140532163	G	T	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.2325	p.Q775H	0.036	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				142	0	0	113	26	18.705
PCDHB8	0	genome.wustl.edu	37	5	140559277	140559277	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140559277	140559277	C	T	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	silent	c.1662	p.D554	0.988	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322				85	0	0	71	15	17.4419
PCDHB16	0	genome.wustl.edu	37	5	140563395	140563395	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140563395	140563395	C	A	SNP	PCDHB16	ENST00000361016	human	ensembl	74_37	+1	known	missense	c.1261	p.L421I	0.982	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963				124	0	0	95	30	24
PCDHGA1	0	genome.wustl.edu	37	5	140712379	140712379	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140712379	140712379	G	A	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	missense	c.2128	p.V710M	0.234	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956				99	0	0	79	15	15.9574
PCDHGA2	0	genome.wustl.edu	37	5	140720690	140720690	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140720690	140720690	C	T	SNP	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	missense	c.2152	p.R718C	0.713	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853				116	0	0	84	30	26.3158
PCDHGA3	0	genome.wustl.edu	37	5	140725511	140725511	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140725511	140725511	G	A	SNP	PCDHGA3	ENST00000253812	human	ensembl	74_37	+1	known	silent	c.1911	p.A637	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245				81	0	0	54	11	16.9231
PCDHGB2	0	genome.wustl.edu	37	5	140739781	140739781	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140739781	140739781	G	A	SNP	PCDHGB2	ENST00000522605	human	ensembl	74_37	+1	known	missense	c.79	p.G27R	0.000	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB2	HGNC	ENSG00000253910				29	0	0	18	5	21.7391
PCDHGB4	0	genome.wustl.edu	37	5	140769353	140769353	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140769353	140769353	C	T	SNP	PCDHGB4	ENST00000519479	human	ensembl	74_37	+1	known	silent	c.1902	p.D634	0.954	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB4	HGNC	ENSG00000253953				57	0	0	30	12	28.5714
PCDHGA10	0	genome.wustl.edu	37	5	140795052	140795052	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140795052	140795052	T	A	SNP	PCDHGA10	ENST00000398610	human	ensembl	74_37	+1	known	missense	c.2310	p.S770R	0.996	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA10	HGNC	ENSG00000253846				135	0	0	113	28	19.8582
PCDHGA11	0	genome.wustl.edu	37	5	140801469	140801469	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140801469	140801469	C	T	SNP	PCDHGA11	ENST00000398587	human	ensembl	74_37	+1	known	silent	c.675	p.G225	0.005	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873				116	0	0	106	29	21.4815
RNF14	0	genome.wustl.edu	37	5	141358224	141358224	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	141358224	141358224	T	C	SNP	RNF14	ENST00000347642	human	ensembl	74_37	+1	known	silent	c.663	p.S221	0.920	pfscan_Znf_RING	pfam_RWD-domain,pfam_Znf_C6HC,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,smart_Znf_C6HC,pfscan_RWD-domain,pfscan_Znf_RING	-	no_errors	RNF14	HGNC	ENSG00000013561				204	1	0.487805	160	54	25.2336
DPYSL3	0	genome.wustl.edu	37	5	146788339	146788339	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	146788339	146788339	T	C	SNP	DPYSL3	ENST00000398514	human	ensembl	74_37	-1	known	silent	c.642	p.E214	1.000	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL3	HGNC	ENSG00000113657				127	0	0	93	31	25
ABLIM3	0	genome.wustl.edu	37	5	148619446	148619446	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	148619446	148619446	G	A	SNP	ABLIM3	ENST00000309868	human	ensembl	74_37	+1	known	missense	c.1199	p.R400H	1.000	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM3	HGNC	ENSG00000173210				152	1	0.653595	110	43	28.1046
AFAP1L1	0	genome.wustl.edu	37	5	148687114	148687114	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	148687114	148687114	C	T	SNP	AFAP1L1	ENST00000296721	human	ensembl	74_37	+1	known	missense	c.685	p.R229W	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1L1	HGNC	ENSG00000157510				76	0	0	56	13	18.8406
CSF1R	0	genome.wustl.edu	37	5	149447811	149447811	+	Silent	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	149447811	149447811	C	G	SNP	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	silent	c.1593	p.L531	0.991	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578				88	0	0	65	14	17.7215
RPS14	0	genome.wustl.edu	37	5	149826384	149826384	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	149826384	149826384	G	A	SNP	RPS14	ENST00000312037	human	ensembl	74_37	-1	known	missense	c.292	p.R98W	1.000	pfam_Ribosomal_S11,pirsf_Ribosomal_S11	pfam_Ribosomal_S11,pirsf_Ribosomal_S11	-	no_errors	RPS14	HGNC	ENSG00000164587				140	0	0	85	17	16.6667
NDST1	0	genome.wustl.edu	37	5	149927860	149927860	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	149927860	149927860	G	A	SNP	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	silent	c.2226	p.S742	0.002	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614				73	0	0	61	15	19.7368
ZNF300P1	0	genome.wustl.edu	37	5	150310667	150310667	+	RNA	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	150310667	150310667	T	G	SNP	ZNF300P1	ENST00000520773	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF300P1	HGNC	ENSG00000197083				33	0	0	25	4	13.7931
ANXA6	0	genome.wustl.edu	37	5	150505975	150505975	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	150505975	150505975	C	A	SNP	ANXA6	ENST00000354546	human	ensembl	74_37	-1	known	silent	c.1044	p.V348	1.000	prints_AnnexinVI	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinVI,prints_AnnexinIV	-	no_errors	ANXA6	HGNC	ENSG00000197043				28	0	0	15	3	16.6667
GALNT10	0	genome.wustl.edu	37	5	153674465	153674465	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	153674465	153674465	C	T	SNP	GALNT10	ENST00000297107	human	ensembl	74_37	+1	known	silent	c.249	p.D83	0.005	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT10	HGNC	ENSG00000164574				86	0	0	48	10	17.2414
MYO10	0	genome.wustl.edu	37	5	16694613	16694613	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	16694613	16694613	C	T	SNP	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	missense	c.3667	p.G1223R	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555				136	1	0.729927	80	25	23.8095
RARS	0	genome.wustl.edu	37	5	167915644	167915644	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	167915644	167915644	G	A	SNP	RARS	ENST00000231572	human	ensembl	74_37	+1	known	missense	c.83	p.R28Q	0.565	NULL	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,pfam_Arg-tRNA-synth_N,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	-	no_errors	RARS	HGNC	ENSG00000113643				137	0	0	93	40	30.0752
SLIT3	0	genome.wustl.edu	37	5	168093623	168093623	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	168093623	168093623	C	A	SNP	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	missense	c.4408	p.A1470S	0.978	smart_Cys_knot_C,pfscan_Cys_knot_C	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347				83	0	0	60	21	25.9259
DOCK2	0	genome.wustl.edu	37	5	169496192	169496192	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	169496192	169496192	C	A	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	missense	c.4696	p.L1566M	1.000	pfam_DOCK_C,superfamily_Cyt_c-like_dom	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516				49	0	0	37	7	15.9091
FAF2	0	genome.wustl.edu	37	5	175933771	175933771	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	175933771	175933771	A	G	SNP	FAF2	ENST00000261942	human	ensembl	74_37	+1	known	silent	c.1158	p.V386	0.762	pfam_UBX,pfscan_UBX	pfam_UBX,superfamily_UBA-like,smart_UAS,pfscan_UBX	-	no_errors	FAF2	HGNC	ENSG00000113194				507	0	0	324	88	21.3592
CDHR2	0	genome.wustl.edu	37	5	176003174	176003174	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	176003174	176003174	C	T	SNP	CDHR2	ENST00000261944	human	ensembl	74_37	+1	known	silent	c.1182	p.Y394	0.777	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR2	HGNC	ENSG00000074276				65	0	0	49	14	22.2222
FGFR4	0	genome.wustl.edu	37	5	176517487	176517487	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	176517487	176517487	G	A	SNP	FGFR4	ENST00000292408	human	ensembl	74_37	+1	known	missense	c.188	p.G63D	0.998	pirsf_FGF_rcpt_fam,smart_Ig_sub,smart_Ig_sub2	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR4	HGNC	ENSG00000160867				90	0	0	74	12	13.9535
MXD3	0	genome.wustl.edu	37	5	176734722	176734722	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	176734722	176734722	C	T	SNP	MXD3	ENST00000423571	human	ensembl	74_37	-1	putative	missense	c.565	p.G189R	0.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MXD3	HGNC	ENSG00000213347				48	0	0	30	5	14.2857
LMAN2	0	genome.wustl.edu	37	5	176761333	176761333	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	176761333	176761333	C	T	SNP	LMAN2	ENST00000303127	human	ensembl	74_37	-1	known	missense	c.862	p.D288N	1.000	NULL	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	-	no_errors	LMAN2	HGNC	ENSG00000169223				68	0	0	49	19	27.9412
FAM153C	0	genome.wustl.edu	37	5	177473894	177473894	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	177473894	177473894	G	A	SNP	FAM153C	ENST00000507848	human	ensembl	74_37	+1	known	missense	c.295	p.A99T	0.000	prints_FAM153	prints_FAM153	-	no_errors	FAM153C	HGNC	ENSG00000204677				111	0	0	119	33	21.7105
GRM6	0	genome.wustl.edu	37	5	178413540	178413540	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	178413540	178413540	C	T	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	missense	c.1715	p.R572H	0.997	NULL	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262				21	0	0	30	7	18.9189
GRM6	0	genome.wustl.edu	37	5	178413854	178413854	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	178413854	178413854	C	T	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	silent	c.1485	p.E495	0.888	superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt_4	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262				40	0	0	24	12	33.3333
GFPT2	0	genome.wustl.edu	37	5	179743769	179743769	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	179743769	179743769	C	T	SNP	GFPT2	ENST00000253778	human	ensembl	74_37	-1	known	missense	c.1147	p.V383M	1.000	pfam_SIS,tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT2	HGNC	ENSG00000131459				61	0	0	33	13	28.2609
FLT4	0	genome.wustl.edu	37	5	180053236	180053236	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	180053236	180053236	C	T	SNP	FLT4	ENST00000261937	human	ensembl	74_37	-1	known	missense	c.1133	p.R378H	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR3_rcpt	-	no_errors	FLT4	HGNC	ENSG00000037280				107	0	0	108	11	9.2437
TRIM52	0	genome.wustl.edu	37	5	180687440	180687440	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	180687440	180687440	T	C	SNP	TRIM52	ENST00000327767	human	ensembl	74_37	-1	known	silent	c.375	p.E125	0.362	smart_Znf_RING	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM52	HGNC	ENSG00000183718				333	0	0	250	63	20.1278
CDH18	0	genome.wustl.edu	37	5	19838877	19838877	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	19838877	19838877	A	G	SNP	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	silent	c.219	p.Y73	1.000	pfam_Cadherin,superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526				99	0	0	74	22	22.9167
DROSHA	0	genome.wustl.edu	37	5	31449476	31449476	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	31449476	31449476	A	G	SNP	DROSHA	ENST00000344624	human	ensembl	74_37	-1	known	silent	c.2733	p.D911	1.000	superfamily_RNase_III_dom,pfscan_RNase_III_dom	pfam_RNase_III_dom,pfam_dsRNA-bd_dom,superfamily_RNase_III_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DROSHA	HGNC	ENSG00000113360				36	0	0	27	8	22.8571
NPR3	0	genome.wustl.edu	37	5	32712294	32712294	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	32712294	32712294	T	C	SNP	NPR3	ENST00000265074	human	ensembl	74_37	+1	known	missense	c.412	p.Y138H	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_Ntpep_rcpt	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_Ntpep_rcpt	-	no_errors	NPR3	HGNC	ENSG00000113389				107	0	0	83	19	18.6275
RAI14	0	genome.wustl.edu	37	5	34823324	34823324	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	34823324	34823324	C	T	SNP	RAI14	ENST00000515799	human	ensembl	74_37	+1	known	silent	c.1386	p.L462	0.998	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_t-SNARE,superfamily_UBA-like,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	RAI14	HGNC	ENSG00000039560				142	0	0	88	24	21.4286
SPEF2	0	genome.wustl.edu	37	5	35691158	35691158	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	35691158	35691158	C	T	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	missense	c.1544	p.A515V	0.292	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582				139	0	0	109	26	19.2593
IRX1	0	genome.wustl.edu	37	5	3599722	3599722	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	3599722	3599722	C	T	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	silent	c.660	p.D220	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549				43	0	0	45	10	18.1818
NIPBL	0	genome.wustl.edu	37	5	37017251	37017251	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	37017251	37017251	G	A	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.4907	p.R1636H	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				64	0	0	68	8	10.5263
GDNF	0	genome.wustl.edu	37	5	37815784	37815784	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	37815784	37815784	T	G	SNP	GDNF	ENST00000326524	human	ensembl	74_37	-1	known	missense	c.605	p.K202T	1.000	pfam_TGF-b_C,smart_TGF-b_C,pirsf_GDNF	pfam_TGF-b_C,smart_TGF-b_C,pirsf_GDNF	-	no_errors	GDNF	HGNC	ENSG00000168621				186	0	0	130	27	17.1975
RICTOR	0	genome.wustl.edu	37	5	38947433	38947433	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	38947433	38947433	G	A	SNP	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	missense	c.4319	p.A1440V	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327				211	0	0	162	47	22.488
CARD6	0	genome.wustl.edu	37	5	40852450	40852450	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	40852450	40852450	C	T	SNP	CARD6	ENST00000254691	human	ensembl	74_37	+1	known	missense	c.1016	p.T339I	0.965	NULL	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pfscan_CARD	-	no_errors	CARD6	HGNC	ENSG00000132357				75	0	0	58	20	25.641
OXCT1	0	genome.wustl.edu	37	5	41862805	41862805	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	41862805	41862805	A	G	SNP	OXCT1	ENST00000196371	human	ensembl	74_37	-1	known	silent	c.126	p.F42	1.000	pirsf_3-oxoacid_CoA-transferase,tigrfam_3-oxoacid_CoA-transf_A	pfam_CoA_trans_fam_I,smart_CoA_trans_fam_I,pirsf_3-oxoacid_CoA-transferase,tigrfam_3-oxoacid_CoA-transf_B,tigrfam_3-oxoacid_CoA-transf_A	-	no_errors	OXCT1	HGNC	ENSG00000083720				128	0	0	87	24	21.6216
ZNF131	0	genome.wustl.edu	37	5	43161497	43161497	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	43161497	43161497	C	T	SNP	ZNF131	ENST00000399534	human	ensembl	74_37	+1	known	missense	c.518	p.A173V	0.994	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZNF131	HGNC	ENSG00000172262				165	0	0	119	27	18.4932
ITGA1	0	genome.wustl.edu	37	5	52177731	52177731	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	52177731	52177731	C	T	SNP	ITGA1	ENST00000282588	human	ensembl	74_37	+1	known	silent	c.651	p.N217	0.233	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA1	HGNC	ENSG00000213949				148	0	0	111	17	13.2812
MCCC2	0	genome.wustl.edu	37	5	70942086	70942086	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	70942086	70942086	T	C	SNP	MCCC2	ENST00000340941	human	ensembl	74_37	+1	known	missense	c.1198	p.F400L	1.000	pfam_Carboxyl_trans,pfscan_COA_CT_C	pfam_Carboxyl_trans,pfscan_COA_CT_N,pfscan_COA_CT_C	-	no_errors	MCCC2	HGNC	ENSG00000131844				129	0	0	83	24	22.4299
MRPS27	0	genome.wustl.edu	37	5	71533950	71533950	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	71533950	71533950	C	T	SNP	MRPS27	ENST00000513900	human	ensembl	74_37	-1	known	missense	c.329	p.R110Q	1.000	pfam_Ribosomal_S27_mit	pfam_Ribosomal_S27_mit	-	no_errors	MRPS27	HGNC	ENSG00000113048				168	0	0	79	40	33.6134
ZNF366	0	genome.wustl.edu	37	5	71739855	71739855	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	71739855	71739855	C	T	SNP	ZNF366	ENST00000318442	human	ensembl	74_37	-1	known	missense	c.1963	p.A655T	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF366	HGNC	ENSG00000178175				338	0	0	242	70	22.4359
VCAN	0	genome.wustl.edu	37	5	82815203	82815203	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	82815203	82815203	G	A	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.1078	p.A360T	0.996	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				259	0	0	200	65	24.5283
COX7C	0	genome.wustl.edu	37	5	85913901	85913901	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	85913901	85913901	C	T	SNP	COX7C	ENST00000247655	human	ensembl	74_37	+1	known	missense	c.29	p.T10I	0.994	pfam_COX7C/Cox8	pfam_COX7C/Cox8,superfamily_COX7C/Cox8	-	no_errors	COX7C	HGNC	ENSG00000127184				46	0	0	26	7	21.2121
SEMA5A	0	genome.wustl.edu	37	5	9044506	9044506	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	9044506	9044506	G	A	SNP	SEMA5A	ENST00000382496	human	ensembl	74_37	-1	known	silent	c.3084	p.Y1028	0.048	NULL	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902				231	0	0	177	45	20.2703
SEMA5A	0	genome.wustl.edu	37	5	9108327	9108327	+	Silent	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	9108327	9108327	T	G	SNP	SEMA5A	ENST00000382496	human	ensembl	74_37	-1	known	silent	c.1998	p.T666	0.294	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902				77	0	0	51	8	13.5593
PCSK1	0	genome.wustl.edu	37	5	95748029	95748029	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	95748029	95748029	A	G	SNP	PCSK1	ENST00000311106	human	ensembl	74_37	-1	known	missense	c.875	p.V292A	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,pfam_Proho_convert,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK1	HGNC	ENSG00000175426				156	0	0	92	24	20.6897
LNPEP	0	genome.wustl.edu	37	5	96363452	96363452	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	96363452	96363452	C	A	SNP	LNPEP	ENST00000231368	human	ensembl	74_37	+1	known	silent	c.2880	p.S960	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	LNPEP	HGNC	ENSG00000113441				169	1	0.588235	121	22	15.3846
SIM1	0	genome.wustl.edu	37	6	100838779	100838779	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	100838779	100838779	C	T	SNP	SIM1	ENST00000262901	human	ensembl	74_37	-1	known	missense	c.1759	p.A587T	0.843	pfam_SIM_C	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	SIM1	HGNC	ENSG00000112246				182	0	0	130	45	25.7143
ASCC3	0	genome.wustl.edu	37	6	101037604	101037604	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	101037604	101037604	G	A	SNP	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	missense	c.5456	p.A1819V	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249				243	0	0	172	39	18.4834
ASCC3	0	genome.wustl.edu	37	6	101315870	101315870	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	101315870	101315870	C	A	SNP	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	missense	c.4	p.A2S	1.000	NULL	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249				79	0	0	54	11	16.9231
BEND3	0	genome.wustl.edu	37	6	107390422	107390422	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	107390422	107390422	C	T	SNP	BEND3	ENST00000369042	human	ensembl	74_37	-1	known	missense	c.1973	p.R658H	1.000	NULL	pfam_BEN_domain	-	no_errors	BEND3	HGNC	ENSG00000178409				86	0	0	56	20	26.3158
SOBP	0	genome.wustl.edu	37	6	107908293	107908293	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	107908293	107908293	G	T	SNP	SOBP	ENST00000317357	human	ensembl	74_37	+1	known	nonsense	c.583	p.E195*	1.000	NULL	NULL	-	no_errors	SOBP	HGNC	ENSG00000112320				351	0	0	291	69	19.1667
SLC16A10	0	genome.wustl.edu	37	6	111498462	111498462	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	111498462	111498462	G	T	SNP	SLC16A10	ENST00000368851	human	ensembl	74_37	+1	known	missense	c.536	p.G179V	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A10	HGNC	ENSG00000112394				176	0	0	138	39	22.0339
NEDD9	0	genome.wustl.edu	37	6	11191366	11191366	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	11191366	11191366	G	A	SNP	NEDD9	ENST00000379446	human	ensembl	74_37	-1	known	missense	c.736	p.P246S	1.000	NULL	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NEDD9	HGNC	ENSG00000111859				103	0	0	65	22	25.2874
DSE	0	genome.wustl.edu	37	6	116580017	116580017	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	116580017	116580017	T	C	SNP	DSE	ENST00000540275	human	ensembl	74_37	+1	known	silent	c.411	p.H137	1.000	NULL	NULL	-	no_errors	DSE	HGNC	ENSG00000111817				52	0	0	52	6	10.3448
ROS1	0	genome.wustl.edu	37	6	117706978	117706978	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	117706978	117706978	G	A	SNP	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	silent	c.2172	p.G724	0.038	smart_LDLR_classB_rpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936				176	0	0	159	11	6.47059
DCBLD1	0	genome.wustl.edu	37	6	117860470	117860470	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	117860470	117860470	T	C	SNP	DCBLD1	ENST00000338728	human	ensembl	74_37	+1	known	silent	c.1029	p.S343	0.994	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_LCCL,pfam_CUB_dom,superfamily_Galactose-bd-like,superfamily_LCCL,superfamily_CUB_dom,smart_CUB_dom,smart_LCCL,smart_Coagulation_fac_5/8-C_type_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_LCCL	-	no_errors	DCBLD1	HGNC	ENSG00000164465				175	1	0.568182	139	34	19.6532
TBC1D32	0	genome.wustl.edu	37	6	121412168	121412168	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	121412168	121412168	G	A	SNP	TBC1D32	ENST00000275159	human	ensembl	74_37	-1	putative	missense	c.3608	p.T1203I	1.000	superfamily_Rab-GTPase-TBC_dom	superfamily_Rab-GTPase-TBC_dom	-	no_errors	TBC1D32	HGNC	ENSG00000146350				208	0	0	155	30	16.2162
HSF2	0	genome.wustl.edu	37	6	122743435	122743435	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	122743435	122743435	T	C	SNP	HSF2	ENST00000368455	human	ensembl	74_37	+1	known	silent	c.822	p.D274	0.995	pfam_Vert_HSTF_C	pfam_Vert_HSTF_C,pfam_HSF_DNA-bd,smart_HSF_DNA-bd,prints_HSF_DNA-bd	-	no_errors	HSF2	HGNC	ENSG00000025156				329	0	0	250	67	21.1356
PTPRK	0	genome.wustl.edu	37	6	128297891	128297891	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	128297891	128297891	G	A	SNP	PTPRK	ENST00000368227	human	ensembl	74_37	-1	known	nonsense	c.3931	p.R1311*	0.973	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRK	HGNC	ENSG00000152894				102	0	0	57	21	26.9231
MED23	0	genome.wustl.edu	37	6	131914253	131914253	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	131914253	131914253	A	T	SNP	MED23	ENST00000368058	human	ensembl	74_37	-1	known	missense	c.3309	p.F1103L	1.000	pfam_Mediator_Med23	pfam_Mediator_Med23	-	no_errors	MED23	HGNC	ENSG00000112282				85	0	0	73	19	20.6522
GFOD1	0	genome.wustl.edu	37	6	13365145	13365145	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	13365145	13365145	C	T	SNP	GFOD1	ENST00000379287	human	ensembl	74_37	-1	known	missense	c.1003	p.A335T	1.000	NULL	pfam_Oxidoreductase_N,pfam_OxRdtase_C	-	no_errors	GFOD1	HGNC	ENSG00000145990				66	0	0	39	13	25
BCLAF1	0	genome.wustl.edu	37	6	136590726	136590726	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	136590726	136590726	A	G	SNP	BCLAF1	ENST00000531224	human	ensembl	74_37	-1	known	missense	c.2068	p.S690P	1.000	NULL	NULL	-	no_errors	BCLAF1	HGNC	ENSG00000029363				143	0	0	142	9	5.96026
KIAA1244	0	genome.wustl.edu	37	6	138601240	138601240	+	Silent	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	138601240	138601240	A	C	SNP	KIAA1244	ENST00000251691	human	ensembl	74_37	+1	known	silent	c.2400	p.G800	0.122	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold,superfamily_Sec7_dom,smart_Sec7_dom	-	no_errors	KIAA1244	HGNC	ENSG00000112379				70	0	0	41	15	26.7857
KIAA1244	0	genome.wustl.edu	37	6	138632618	138632618	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	138632618	138632618	G	A	SNP	KIAA1244	ENST00000251691	human	ensembl	74_37	+1	known	missense	c.4171	p.A1391T	1.000	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold,superfamily_Sec7_dom,smart_Sec7_dom	-	no_errors	KIAA1244	HGNC	ENSG00000112379				15	0	0	12	3	20
SASH1	0	genome.wustl.edu	37	6	148865429	148865429	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	148865429	148865429	C	T	SNP	SASH1	ENST00000367467	human	ensembl	74_37	+1	known	silent	c.2823	p.H941	0.000	NULL	pfam_rSAM/SH3_domain-containing,pfam_SAM_2,pfam_SAM_type1,pfam_SH3_2,superfamily_SAM/pointed,superfamily_SH3_domain,smart_SH3_domain,smart_SAM,pfscan_SAM	-	no_errors	SASH1	HGNC	ENSG00000111961				120	1	0.826446	95	21	18.1034
UST	0	genome.wustl.edu	37	6	149342593	149342593	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	149342593	149342593	G	A	SNP	UST	ENST00000367463	human	ensembl	74_37	+1	known	missense	c.913	p.V305M	1.000	pfam_Sulfotransferase,pfam_Gal-3-0_sulfotransfrase	pfam_Sulfotransferase,pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	UST	HGNC	ENSG00000111962				195	0	0	123	44	26.3473
CCDC170	0	genome.wustl.edu	37	6	151869460	151869460	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	151869460	151869460	A	G	SNP	CCDC170	ENST00000367290	human	ensembl	74_37	+1	known	missense	c.610	p.N204D	0.974	NULL	superfamily_Prefoldin,superfamily_Smac_DIABLO-like	-	no_errors	CCDC170	HGNC	ENSG00000120262				54	0	0	53	10	15.873
JARID2	0	genome.wustl.edu	37	6	15496493	15496493	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	15496493	15496493	C	A	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	missense	c.1037	p.A346D	1.000	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				123	0	0	84	22	20.7547
NOX3	0	genome.wustl.edu	37	6	155776222	155776222	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	155776222	155776222	C	T	SNP	NOX3	ENST00000159060	human	ensembl	74_37	-1	known	silent	c.90	p.T30	0.134	NULL	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX3	HGNC	ENSG00000074771				83	0	0	62	14	18.4211
ARID1B	0	genome.wustl.edu	37	6	157522175	157522175	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	157522175	157522175	G	T	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	missense	c.4567	p.G1523C	0.999	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618				90	0	0	54	21	28
ZDHHC14	0	genome.wustl.edu	37	6	157803268	157803268	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	157803268	157803268	T	G	SNP	ZDHHC14	ENST00000359775	human	ensembl	74_37	+1	known	missense	c.215	p.L72R	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC14	HGNC	ENSG00000175048				60	0	0	60	11	15.493
LPA	0	genome.wustl.edu	37	6	161014990	161014990	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	161014990	161014990	C	T	SNP	LPA	ENST00000316300	human	ensembl	74_37	-1	known	missense	c.3629	p.G1210D	0.936	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	LPA	HGNC	ENSG00000198670				157	0	0	109	27	19.8529
PLG	0	genome.wustl.edu	37	6	161134156	161134156	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	161134156	161134156	A	C	SNP	PLG	ENST00000308192	human	ensembl	74_37	+1	known	missense	c.546	p.E182D	1.000	pirsf_Pept_S1A_plasmin,superfamily_Kringle-like,smart_Kringle	pirsf_Pept_S1A_plasmin,pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	PLG	HGNC	ENSG00000122194				205	0	0	150	35	18.9189
PLG	0	genome.wustl.edu	37	6	161159605	161159605	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	161159605	161159605	C	T	SNP	PLG	ENST00000308192	human	ensembl	74_37	+1	known	missense	c.1838	p.S613F	0.966	pirsf_Pept_S1A_plasmin,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	pirsf_Pept_S1A_plasmin,pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	PLG	HGNC	ENSG00000122194				130	0	0	117	21	15.2174
QKI	0	genome.wustl.edu	37	6	163956101	163956101	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	163956101	163956101	G	A	SNP	QKI	ENST00000361752	human	ensembl	74_37	+1	known	missense	c.490	p.A164T	1.000	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	QKI	HGNC	ENSG00000112531				127	0	0	101	17	14.4068
QKI	0	genome.wustl.edu	37	6	163984455	163984455	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	163984455	163984455	C	G	SNP	QKI	ENST00000361752	human	ensembl	74_37	+1	known	missense	c.638	p.A213G	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	QKI	HGNC	ENSG00000112531				78	0	0	42	10	19.2308
QKI	0	genome.wustl.edu	37	6	163987788	163987788	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	163987788	163987788	C	T	SNP	QKI	ENST00000361752	human	ensembl	74_37	+1	known	missense	c.970	p.R324C	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	QKI	HGNC	ENSG00000112531				49	0	0	33	12	26.6667
T	0	genome.wustl.edu	37	6	166571818	166571818	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	166571818	166571818	C	T	SNP	T	ENST00000296946	human	ensembl	74_37	-1	known	silent	c.1293	p.S431	0.982	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_Brachyury,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	T	HGNC	ENSG00000164458				162	1	0.613497	123	32	20.6452
RNASET2	0	genome.wustl.edu	37	6	167352465	167352465	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	167352465	167352465	C	T	SNP	RNASET2	ENST00000476238	human	ensembl	74_37	-1	known	missense	c.364	p.A122T	0.997	pfam_RNase_T2-like,superfamily_RNase_T2-like	pfam_RNase_T2-like,superfamily_RNase_T2-like	-	no_errors	RNASET2	HGNC	ENSG00000026297				151	0	0	100	28	21.875
SMOC2	0	genome.wustl.edu	37	6	168949813	168949813	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	168949813	168949813	T	C	SNP	SMOC2	ENST00000354536	human	ensembl	74_37	+1	known	silent	c.600	p.I200	0.843	superfamily_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_EF_hand_dom,pfscan_Thyroglobulin_1	-	no_errors	SMOC2	HGNC	ENSG00000112562				170	0	0	123	37	23.125
DLL1	0	genome.wustl.edu	37	6	170597466	170597466	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	170597466	170597466	G	A	SNP	DLL1	ENST00000366756	human	ensembl	74_37	-1	known	silent	c.531	p.F177	0.957	pfam_DSL,smart_DSL,pfscan_DSL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	DLL1	HGNC	ENSG00000198719				79	0	0	60	12	16.6667
RNF144B	0	genome.wustl.edu	37	6	18399734	18399734	+	RNA	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	18399734	18399734	T	C	SNP	RNF144B	ENST00000486622	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RNF144B	HGNC	ENSG00000137393				73	0	0	41	12	22.6415
KIAA0319	0	genome.wustl.edu	37	6	24588957	24588957	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	24588957	24588957	G	A	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	silent	c.858	p.T286	0.000	NULL	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261				134	0	0	103	26	20.155
TRIM38	0	genome.wustl.edu	37	6	25966795	25966795	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	25966795	25966795	C	A	SNP	TRIM38	ENST00000349458	human	ensembl	74_37	+1	known	silent	c.45	p.T15	0.921	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM38	HGNC	ENSG00000112343				92	0	0	62	18	22.5
HIST1H1A	0	genome.wustl.edu	37	6	26017758	26017758	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	26017758	26017758	G	A	SNP	HIST1H1A	ENST00000244573	human	ensembl	74_37	-1	known	missense	c.203	p.A68V	1.000	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1A	HGNC	ENSG00000124610				57	0	0	54	6	10
HIST1H3F	0	genome.wustl.edu	37	6	26250706	26250706	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	26250706	26250706	C	A	SNP	HIST1H3F	ENST00000446824	human	ensembl	74_37	-1	known	missense	c.128	p.R43M	1.000	superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3F	HGNC	ENSG00000256316				153	0	0	116	35	23.1788
HIST1H2AL	0	genome.wustl.edu	37	6	27833428	27833428	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	27833428	27833428	G	A	SNP	HIST1H2AL	ENST00000357320	human	ensembl	74_37	+1	known	missense	c.296	p.G99D	1.000	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AL	HGNC	ENSG00000198374				172	1	0.578035	119	30	20.1342
NKAPL	0	genome.wustl.edu	37	6	28227419	28227419	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	28227419	28227419	G	A	SNP	NKAPL	ENST00000343684	human	ensembl	74_37	+1	known	silent	c.270	p.S90	0.001	NULL	pfam_DUF926	-	no_errors	NKAPL	HGNC	ENSG00000189134				106	0	0	71	26	26.8041
OR10C1	0	genome.wustl.edu	37	6	29408492	29408492	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	29408492	29408492	C	T	SNP	OR10C1	ENST00000444197	human	ensembl	74_37	+1	known	missense	c.700	p.R234C	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR10C1	HGNC	ENSG00000206474				377	0	0	262	92	25.9887
CLIC1	0	genome.wustl.edu	37	6	31704062	31704062	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	31704062	31704062	G	A	SNP	CLIC1	ENST00000375779	human	ensembl	74_37	-1	known	missense	c.16	p.P6S	0.995	superfamily_Thioredoxin-like_fold,tigrfam_Int_Cl_channel	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	-	no_errors	CLIC1	HGNC	ENSG00000213719				78	0	0	51	16	23.8806
NEU1	0	genome.wustl.edu	37	6	31829855	31829855	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	31829855	31829855	G	A	SNP	NEU1	ENST00000375631	human	ensembl	74_37	-1	known	silent	c.273	p.L91	0.266	superfamily_Sialidases	superfamily_Sialidases	-	no_errors	NEU1	HGNC	ENSG00000204386				79	0	0	66	14	17.5
PRRT1	0	genome.wustl.edu	37	6	32117390	32117390	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	32117390	32117390	T	C	SNP	PRRT1	ENST00000211413	human	ensembl	74_37	-1	known	missense	c.668	p.Y223C	1.000	pfam_CD225/Dispanin_fam	pfam_CD225/Dispanin_fam	-	no_errors	PRRT1	HGNC	ENSG00000204314				58	0	0	52	7	11.8644
AGPAT1	0	genome.wustl.edu	37	6	32137211	32137211	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	32137211	32137211	G	A	SNP	AGPAT1	ENST00000336984	human	ensembl	74_37	-1	known	missense	c.694	p.R232W	0.995	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase,tigrfam_AGP_acyltrans	-	no_errors	AGPAT1	HGNC	ENSG00000204310				102	0	0	91	26	22.2222
TAP2	0	genome.wustl.edu	37	6	32803500	32803500	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	32803500	32803500	C	T	SNP	TAP2	ENST00000374897	human	ensembl	74_37	-1	known	missense	c.659	p.R220Q	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_Ag_transporter2	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_ABC_B3,prints_ABC_B2,tigrfam_Ag_transporter2	-	no_errors	TAP2	HGNC	ENSG00000204267				98	0	0	66	18	21.4286
KIFC1	0	genome.wustl.edu	37	6	33373357	33373357	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	33373357	33373357	G	T	SNP	KIFC1	ENST00000428849	human	ensembl	74_37	+1	known	missense	c.1485	p.E495D	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIFC1	HGNC	ENSG00000237649				35	0	0	24	11	31.4286
ITPR3	0	genome.wustl.edu	37	6	33643506	33643506	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	33643506	33643506	G	A	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	missense	c.3155	p.G1052D	1.000	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				59	0	0	34	13	27.6596
GRM4	0	genome.wustl.edu	37	6	34008452	34008452	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	34008452	34008452	G	A	SNP	GRM4	ENST00000374181	human	ensembl	74_37	-1	known	silent	c.1242	p.Y414	0.991	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_4,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM4	HGNC	ENSG00000124493				79	0	0	52	10	16.129
GRM4	0	genome.wustl.edu	37	6	34101128	34101128	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	34101128	34101128	A	T	SNP	GRM4	ENST00000374181	human	ensembl	74_37	-1	known	missense	c.146	p.I49N	1.000	superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_4,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM4	HGNC	ENSG00000124493				70	0	0	47	9	16.0714
PACSIN1	0	genome.wustl.edu	37	6	34499507	34499507	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	34499507	34499507	G	A	SNP	PACSIN1	ENST00000244458	human	ensembl	74_37	+1	known	missense	c.1168	p.V390M	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PACSIN1	HGNC	ENSG00000124507				175	0	0	137	46	25.1366
UHRF1BP1	0	genome.wustl.edu	37	6	34804017	34804017	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	34804017	34804017	C	T	SNP	UHRF1BP1	ENST00000192788	human	ensembl	74_37	+1	known	missense	c.925	p.R309C	1.000	NULL	NULL	-	no_errors	UHRF1BP1	HGNC	ENSG00000065060				264	0	0	160	60	27.2727
PPARD	0	genome.wustl.edu	37	6	35392439	35392439	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	35392439	35392439	C	T	SNP	PPARD	ENST00000311565	human	ensembl	74_37	+1	known	missense	c.961	p.R321C	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_1Cnucl_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_1Cnucl_rcpt,prints_Str_hrmn_rcpt,prints_1Cnucl_rcpt_B,prints_Znf_hrmn_rcpt,prints_1Cnucl_rcpt_A	-	no_errors	PPARD	HGNC	ENSG00000112033				53	0	0	42	9	17.6471
ETV7	0	genome.wustl.edu	37	6	36343699	36343699	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	36343699	36343699	C	T	SNP	ETV7	ENST00000340181	human	ensembl	74_37	-1	known	missense	c.256	p.A86T	1.000	pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV7	HGNC	ENSG00000010030				131	0	0	90	22	19.6429
FAM50B	0	genome.wustl.edu	37	6	3850865	3850865	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	3850865	3850865	G	A	SNP	FAM50B	ENST00000380272	human	ensembl	74_37	+1	novel	missense	c.820	p.V274M	1.000	pfam_XAP5	pfam_XAP5	-	no_errors	FAM50B	HGNC	ENSG00000145945				65	0	0	61	12	16.4384
DAAM2	0	genome.wustl.edu	37	6	39824082	39824082	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	39824082	39824082	G	A	SNP	DAAM2	ENST00000274867	human	ensembl	74_37	+1	known	missense	c.4	p.A2T	1.000	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DAAM2	HGNC	ENSG00000146122				8	0	0	2	2	50
LRFN2	0	genome.wustl.edu	37	6	40360464	40360464	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	40360464	40360464	G	A	SNP	LRFN2	ENST00000338305	human	ensembl	74_37	-1	known	silent	c.1588	p.L530	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN2	HGNC	ENSG00000156564				37	0	0	41	10	19.6078
FOXP4	0	genome.wustl.edu	37	6	41533592	41533592	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	41533592	41533592	G	A	SNP	FOXP4	ENST00000307972	human	ensembl	74_37	+1	known	missense	c.94	p.G32S	0.941	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP4	HGNC	ENSG00000137166				168	0	0	86	35	28.9256
MDFI	0	genome.wustl.edu	37	6	41613956	41613956	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	41613956	41613956	G	A	SNP	MDFI	ENST00000230321	human	ensembl	74_37	+1	known	missense	c.169	p.A57T	0.191	NULL	NULL	-	no_errors	MDFI	HGNC	ENSG00000112559				84	0	0	95	7	6.86275
USP49	0	genome.wustl.edu	37	6	41773695	41773695	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	41773695	41773695	C	A	SNP	USP49	ENST00000373009	human	ensembl	74_37	-1	known	nonsense	c.1027	p.E343*	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP49	HGNC	ENSG00000164663				56	0	0	41	21	33.871
TRERF1	0	genome.wustl.edu	37	6	42227276	42227276	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	42227276	42227276	C	T	SNP	TRERF1	ENST00000541110	human	ensembl	74_37	-1	known	silent	c.2130	p.P710	0.811	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	TRERF1	HGNC	ENSG00000124496				40	0	0	37	10	21.2766
CUL7	0	genome.wustl.edu	37	6	43010580	43010580	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	43010580	43010580	G	A	SNP	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	missense	c.3857	p.A1286V	0.994	pfam_Cullin_N	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090				20	0	0	17	6	26.087
TTBK1	0	genome.wustl.edu	37	6	43222808	43222808	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	43222808	43222808	C	T	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	nonsense	c.598	p.R200*	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216				89	0	0	57	27	32.1429
YIPF3	0	genome.wustl.edu	37	6	43480020	43480020	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	43480020	43480020	G	A	SNP	YIPF3	ENST00000372422	human	ensembl	74_37	-1	known	missense	c.938	p.P313L	0.995	NULL	NULL	-	no_errors	YIPF3	HGNC	ENSG00000137207				133	0	0	92	36	28.125
RSPH9	0	genome.wustl.edu	37	6	43612906	43612906	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	43612906	43612906	G	A	SNP	RSPH9	ENST00000372165	human	ensembl	74_37	+1	known	missense	c.71	p.R24H	0.987	NULL	NULL	-	no_errors	RSPH9	HGNC	ENSG00000172426				70	0	0	40	17	29.8246
SLC29A1	0	genome.wustl.edu	37	6	44198398	44198398	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	44198398	44198398	G	A	SNP	SLC29A1	ENST00000313248	human	ensembl	74_37	+1	known	missense	c.920	p.R307H	0.000	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,tigrfam_Eqnu_transpt	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt,tigrfam_Eqnu_transpt	-	no_errors	SLC29A1	HGNC	ENSG00000112759				84	0	0	42	14	25
CDYL	0	genome.wustl.edu	37	6	4943797	4943797	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	4943797	4943797	T	C	SNP	CDYL	ENST00000328908	human	ensembl	74_37	+1	known	missense	c.1301	p.F434S	1.000	pfam_Crotonase_core_superfam	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL	HGNC	ENSG00000153046				190	0	0	167	48	22.3256
CDYL	0	genome.wustl.edu	37	6	4952537	4952537	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	4952537	4952537	C	T	SNP	CDYL	ENST00000328908	human	ensembl	74_37	+1	known	missense	c.1532	p.A511V	0.998	pfam_Crotonase_core_superfam	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL	HGNC	ENSG00000153046				93	0	0	63	16	20.2532
CRISP1	0	genome.wustl.edu	37	6	49825053	49825053	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	49825053	49825053	T	C	SNP	CRISP1	ENST00000335847	human	ensembl	74_37	-1	known	missense	c.61	p.M21V	0.000	superfamily_CAP_domain	pfam_Cysteine_rich_secretory,pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1,prints_V5_allergen	-	no_errors	CRISP1	HGNC	ENSG00000124812				76	0	0	49	16	24.6154
PKHD1	0	genome.wustl.edu	37	6	51892954	51892954	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	51892954	51892954	C	T	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.3560	p.G1187E	1.000	superfamily_Ig_E-set,smart_IPT	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				330	0	0	259	25	8.80282
ICK	0	genome.wustl.edu	37	6	52883237	52883237	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	52883237	52883237	G	A	SNP	ICK	ENST00000350082	human	ensembl	74_37	-1	known	missense	c.554	p.A185V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ICK	HGNC	ENSG00000112144				247	0	0	184	61	24.898
FARS2	0	genome.wustl.edu	37	6	5369002	5369002	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	5369002	5369002	A	G	SNP	FARS2	ENST00000274680	human	ensembl	74_37	+1	known	missense	c.199	p.T67A	0.078	NULL	pfam_Phenylalanyl-tRNA_Synthase,pfam_PheS_beta_Fdx_antiC-bd,superfamily_PheS_beta_Fdx_antiC-bd,smart_PheS_beta_Fdx_antiC-bd,pfscan_aa-tRNA-synth_II,tigrfam_Phe-tRNA-synth_IIc_mito	-	no_errors	FARS2	HGNC	ENSG00000145982				54	0	0	40	14	25.9259
COL21A1	0	genome.wustl.edu	37	6	56047377	56047377	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	56047377	56047377	G	A	SNP	COL21A1	ENST00000244728	human	ensembl	74_37	-1	known	silent	c.40	p.L14	0.941	NULL	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL21A1	HGNC	ENSG00000124749				23	0	0	14	3	17.6471
DST	0	genome.wustl.edu	37	6	56382024	56382024	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	56382024	56382024	C	T	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.18236	p.C6079Y	0.995	pfam_Spectrin_repeat,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				377	0	0	264	63	19.2661
DST	0	genome.wustl.edu	37	6	56489995	56489995	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	56489995	56489995	C	T	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.4691	p.R1564H	0.996	superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				368	0	0	249	56	18.3607
DST	0	genome.wustl.edu	37	6	56501366	56501366	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	56501366	56501366	C	T	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.2950	p.A984T	0.045	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				208	0	0	149	33	18.1319
KIAA1586	0	genome.wustl.edu	37	6	56917509	56917509	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	56917509	56917509	G	A	SNP	KIAA1586	ENST00000370733	human	ensembl	74_37	+1	known	missense	c.212	p.R71Q	0.756	NULL	superfamily_RNaseH-like_dom	-	no_errors	KIAA1586	HGNC	ENSG00000168116				112	0	0	76	17	18.2796
LY86	0	genome.wustl.edu	37	6	6588968	6588968	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	6588968	6588968	A	G	SNP	LY86	ENST00000230568	human	ensembl	74_37	+1	known	missense	c.1	p.M1V	0.994	NULL	pfam_ML_dom,superfamily_Ig_E-set,smart_ML_dom	-	no_errors	LY86	HGNC	ENSG00000112799				95	0	0	80	24	23.0769
COL9A1	0	genome.wustl.edu	37	6	70944498	70944498	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	70944498	70944498	G	A	SNP	COL9A1	ENST00000357250	human	ensembl	74_37	-1	known	missense	c.2258	p.P753L	1.000	pfam_Collagen	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL9A1	HGNC	ENSG00000112280				48	0	0	36	14	28
OGFRL1	0	genome.wustl.edu	37	6	72011140	72011140	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	72011140	72011140	G	A	SNP	OGFRL1	ENST00000370435	human	ensembl	74_37	+1	known	silent	c.744	p.E248	1.000	pfam_OGF_rcpt	pfam_OGF_rcpt	-	no_errors	OGFRL1	HGNC	ENSG00000119900				602	0	0	468	135	22.3881
RREB1	0	genome.wustl.edu	37	6	7248924	7248924	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	7248924	7248924	C	T	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.4952	p.A1651V	0.991	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				55	0	0	31	7	18.4211
DSP	0	genome.wustl.edu	37	6	7576615	7576615	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	7576615	7576615	C	T	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.2719	p.R907C	1.000	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				198	0	0	147	41	21.8085
DSP	0	genome.wustl.edu	37	6	7585193	7585193	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	7585193	7585193	T	C	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	silent	c.7698	p.G2566	0.000	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				145	1	0.684932	97	28	22.4
COL12A1	0	genome.wustl.edu	37	6	75875263	75875263	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	75875263	75875263	A	G	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	silent	c.2943	p.S981	0.997	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				251	0	0	182	54	22.8814
TMEM30A	0	genome.wustl.edu	37	6	75968604	75968604	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	75968604	75968604	G	A	SNP	TMEM30A	ENST00000230461	human	ensembl	74_37	-1	known	missense	c.784	p.R262C	1.000	pfam_DUF284_TM_euk,pirsf_DUF284_TM_euk	pfam_DUF284_TM_euk,pirsf_DUF284_TM_euk	-	no_errors	TMEM30A	HGNC	ENSG00000112697				157	0	0	121	39	24.375
SENP6	0	genome.wustl.edu	37	6	76425219	76425219	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	76425219	76425219	G	T	SNP	SENP6	ENST00000370014	human	ensembl	74_37	+1	known	missense	c.3248	p.S1083I	1.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP6	HGNC	ENSG00000112701				166	0	0	145	38	20.765
MYO6	0	genome.wustl.edu	37	6	76623846	76623846	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	76623846	76623846	G	A	SNP	MYO6	ENST00000369981	human	ensembl	74_37	+1	known	missense	c.3509	p.R1170H	1.000	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO6	HGNC	ENSG00000196586				193	0	0	143	45	23.9362
MYO6	0	genome.wustl.edu	37	6	76624589	76624589	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	76624589	76624589	C	T	SNP	MYO6	ENST00000369981	human	ensembl	74_37	+1	known	missense	c.3721	p.R1241C	1.000	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO6	HGNC	ENSG00000196586				96	0	0	55	16	22.5352
IBTK	0	genome.wustl.edu	37	6	82933262	82933262	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	82933262	82933262	A	C	SNP	IBTK	ENST00000306270	human	ensembl	74_37	-1	known	missense	c.1019	p.I340S	0.047	superfamily_RCC1/BLIP-II	pfam_Reg_chr_condens,pfam_BTB_POZ,pfam_Ankyrin_rpt,superfamily_RCC1/BLIP-II,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like,pfscan_Reg_chr_condens	-	no_errors	IBTK	HGNC	ENSG00000005700				135	0	0	110	24	17.9104
C6orf165	0	genome.wustl.edu	37	6	88136278	88136278	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	88136278	88136278	T	C	SNP	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	missense	c.875	p.M292T	0.990	pfam_DUF3508	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514				56	0	0	42	10	19.2308
CNR1	0	genome.wustl.edu	37	6	88854388	88854388	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	88854388	88854388	G	T	SNP	CNR1	ENST00000369499	human	ensembl	74_37	-1	known	silent	c.606	p.A202	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Canbinoid_rcpt_1,prints_Cnbnoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CNR1	HGNC	ENSG00000118432				48	0	0	35	10	22.2222
GNB2	0	genome.wustl.edu	37	7	100276081	100276081	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	100276081	100276081	G	A	SNP	GNB2	ENST00000303210	human	ensembl	74_37	+1	known	missense	c.760	p.D254N	1.000	pirsf_Guanine_nucleotide-bd_bsu,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pirsf_Guanine_nucleotide-bd_bsu,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Gprotein_B,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GNB2	HGNC	ENSG00000172354				45	0	0	39	13	25
TRIP6	0	genome.wustl.edu	37	7	100469273	100469273	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	100469273	100469273	C	T	SNP	TRIP6	ENST00000200457	human	ensembl	74_37	+1	known	missense	c.1108	p.R370C	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	TRIP6	HGNC	ENSG00000087077				75	0	0	54	10	15.625
PLOD3	0	genome.wustl.edu	37	7	100853896	100853896	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	100853896	100853896	G	A	SNP	PLOD3	ENST00000223127	human	ensembl	74_37	-1	known	missense	c.1417	p.R473W	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397				87	0	0	48	22	31.4286
ARMC10	0	genome.wustl.edu	37	7	102738805	102738805	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	102738805	102738805	A	G	SNP	ARMC10	ENST00000323716	human	ensembl	74_37	+1	known	silent	c.837	p.R279	0.896	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	ARMC10	HGNC	ENSG00000170632				127	0	0	129	12	8.51064
PIK3CG	0	genome.wustl.edu	37	7	106508673	106508673	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	106508673	106508673	G	A	SNP	PIK3CG	ENST00000359195	human	ensembl	74_37	+1	known	missense	c.667	p.V223I	0.227	pfam_PI3K_Ras-bd_dom,smart_PI3K_Ras-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CG	HGNC	ENSG00000105851				127	0	0	78	33	29.7297
NRCAM	0	genome.wustl.edu	37	7	107822325	107822325	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	107822325	107822325	C	T	SNP	NRCAM	ENST00000379028	human	ensembl	74_37	-1	known	missense	c.2587	p.E863K	0.991	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NRCAM	HGNC	ENSG00000091129				77	0	0	68	22	24.4444
NRCAM	0	genome.wustl.edu	37	7	107834488	107834488	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	107834488	107834488	C	A	SNP	NRCAM	ENST00000379028	human	ensembl	74_37	-1	known	missense	c.1758	p.R586S	0.373	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NRCAM	HGNC	ENSG00000091129				177	0	0	114	46	28.75
WNT2	0	genome.wustl.edu	37	7	116955281	116955281	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	116955281	116955281	G	A	SNP	WNT2	ENST00000265441	human	ensembl	74_37	-1	known	silent	c.432	p.S144	0.005	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt2	-	no_errors	WNT2	HGNC	ENSG00000105989				152	0	0	107	37	25.6944
SPAM1	0	genome.wustl.edu	37	7	123593853	123593853	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	123593853	123593853	G	A	SNP	SPAM1	ENST00000340011	human	ensembl	74_37	+1	known	missense	c.229	p.G77R	0.985	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	SPAM1	HGNC	ENSG00000106304				121	0	0	91	17	15.7407
ZNF800	0	genome.wustl.edu	37	7	127014342	127014342	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	127014342	127014342	A	G	SNP	ZNF800	ENST00000265827	human	ensembl	74_37	-1	known	missense	c.1048	p.S350P	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF800	HGNC	ENSG00000048405				233	0	0	169	58	25.5507
FSCN3	0	genome.wustl.edu	37	7	127236393	127236393	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	127236393	127236393	C	T	SNP	FSCN3	ENST00000265825	human	ensembl	74_37	+1	known	missense	c.853	p.R285C	0.171	pfam_Fascin-domain,superfamily_Actin_cross-linking	pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FSCN3	HGNC	ENSG00000106328				284	0	0	222	66	22.9167
RBM28	0	genome.wustl.edu	37	7	127955004	127955004	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	127955004	127955004	G	A	SNP	RBM28	ENST00000223073	human	ensembl	74_37	-1	known	nonsense	c.1858	p.Q620*	0.030	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM28	HGNC	ENSG00000106344				352	0	0	304	68	18.2796
IRF5	0	genome.wustl.edu	37	7	128588011	128588011	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	128588011	128588011	G	A	SNP	IRF5	ENST00000357234	human	ensembl	74_37	+1	known	missense	c.1016	p.R339H	0.999	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF5	HGNC	ENSG00000128604				108	0	0	104	19	15.4472
SMO	0	genome.wustl.edu	37	7	128845469	128845469	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	128845469	128845469	T	C	SNP	SMO	ENST00000249373	human	ensembl	74_37	+1	known	missense	c.766	p.W256R	1.000	pfam_Frizzled,pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,pfam_GPCR_2_secretin-like,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	SMO	HGNC	ENSG00000128602				231	1	0.431034	143	46	24.3386
KLHDC10	0	genome.wustl.edu	37	7	129770479	129770479	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	129770479	129770479	C	T	SNP	KLHDC10	ENST00000335420	human	ensembl	74_37	+1	known	silent	c.1222	p.L408	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1	-	no_errors	KLHDC10	HGNC	ENSG00000128607				199	0	0	186	10	5.10204
PODXL	0	genome.wustl.edu	37	7	131195812	131195812	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	131195812	131195812	T	C	SNP	PODXL	ENST00000541194	human	ensembl	74_37	-1	known	missense	c.487	p.K163E	0.000	pirsf_Podocalyxin-like_p1	pfam_CD34/Podocalyxin,pirsf_Podocalyxin-like_p1	-	no_errors	PODXL	HGNC	ENSG00000128567				396	2	0.502513	312	74	19.171
PLXNA4	0	genome.wustl.edu	37	7	132192606	132192606	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	132192606	132192606	G	T	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	missense	c.847	p.L283I	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866				108	0	0	54	19	26.0274
EXOC4	0	genome.wustl.edu	37	7	132973835	132973835	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	132973835	132973835	G	A	SNP	EXOC4	ENST00000253861	human	ensembl	74_37	+1	known	missense	c.436	p.A146T	1.000	NULL	pfam_Sec8_exocyst	-	no_errors	EXOC4	HGNC	ENSG00000131558				47	0	0	42	10	19.2308
EXOC4	0	genome.wustl.edu	37	7	133164813	133164813	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	133164813	133164813	G	A	SNP	EXOC4	ENST00000253861	human	ensembl	74_37	+1	known	silent	c.1338	p.S446	0.006	NULL	pfam_Sec8_exocyst	-	no_errors	EXOC4	HGNC	ENSG00000131558				153	0	0	109	29	21.0145
CNOT4	0	genome.wustl.edu	37	7	135047807	135047807	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	135047807	135047807	C	T	SNP	CNOT4	ENST00000541284	human	ensembl	74_37	-1	known	missense	c.1972	p.A658T	1.000	NULL	pfam_RRM_dom,smart_RRM_dom_euk,pfscan_Znf_RING,pfscan_RRM_dom	-	no_errors	CNOT4	HGNC	ENSG00000080802				195	0	0	123	45	26.7857
MGAM	0	genome.wustl.edu	37	7	141795515	141795515	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	141795515	141795515	T	C	SNP	MGAM	ENST00000549489	human	ensembl	74_37	+1	known	splice_site	c.4919+2	e40+2	1.000	-	-	-	no_errors	MGAM	HGNC	ENSG00000257335				325	0	0	350	19	5.14905
ZNF282	0	genome.wustl.edu	37	7	148921352	148921352	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	148921352	148921352	G	A	SNP	ZNF282	ENST00000479907	human	ensembl	74_37	+1	putative	missense	c.1372	p.A458T	0.999	NULL	pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF282	HGNC	ENSG00000170265				26	0	0	20	4	16.6667
ZNF767	0	genome.wustl.edu	37	7	149318586	149318586	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	149318586	149318586	G	A	SNP	ZNF767	ENST00000463567	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ZNF767	HGNC	ENSG00000133624				150	0	0	87	45	34.0909
SSPO	0	genome.wustl.edu	37	7	149508775	149508775	+	RNA	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	149508775	149508775	G	A	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.851	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				144	1	0.689655	80	24	23.0769
KCNH2	0	genome.wustl.edu	37	7	150647278	150647278	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	150647278	150647278	G	A	SNP	KCNH2	ENST00000262186	human	ensembl	74_37	-1	known	silent	c.2376	p.G792	0.010	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118				89	0	0	58	18	23.6842
KCNH2	0	genome.wustl.edu	37	7	150671835	150671835	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	150671835	150671835	C	T	SNP	KCNH2	ENST00000262186	human	ensembl	74_37	-1	known	missense	c.271	p.E91K	1.000	pfam_PAS_fold,pfam_PAS_fold_3,superfamily_PAS,tigrfam_PAS	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118				16	0	0	9	5	35.7143
NOS3	0	genome.wustl.edu	37	7	150696110	150696110	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	150696110	150696110	A	C	SNP	NOS3	ENST00000297494	human	ensembl	74_37	+1	known	missense	c.893	p.D298A	1.000	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS3	HGNC	ENSG00000164867				175	0	0	123	31	20.1299
ABCB8	0	genome.wustl.edu	37	7	150725583	150725583	+	Silent	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	150725583	150725583	T	A	SNP	ABCB8	ENST00000542328	human	ensembl	74_37	+1	known	silent	c.30	p.A10	0.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB8	HGNC	ENSG00000197150				14	0	0	6	4	40
CDK5	0	genome.wustl.edu	37	7	150752436	150752436	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	150752436	150752436	G	A	SNP	CDK5	ENST00000485972	human	ensembl	74_37	-1	known	missense	c.508	p.P170S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	CDK5	HGNC	ENSG00000164885				50	0	0	26	10	27.7778
AGAP3	0	genome.wustl.edu	37	7	150814817	150814817	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	150814817	150814817	G	A	SNP	AGAP3	ENST00000397238	human	ensembl	74_37	+1	known	missense	c.659	p.S220N	1.000	pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP3	HGNC	ENSG00000133612				135	0	0	107	33	23.5714
UBE3C	0	genome.wustl.edu	37	7	157041136	157041136	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	157041136	157041136	C	T	SNP	UBE3C	ENST00000348165	human	ensembl	74_37	+1	known	silent	c.2556	p.A852	0.026	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,superfamily_HECT,superfamily_DHFR-like_dom,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3C	HGNC	ENSG00000009335				234	0	0	159	50	23.9234
VIPR2	0	genome.wustl.edu	37	7	158935152	158935152	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	158935152	158935152	G	A	SNP	VIPR2	ENST00000262178	human	ensembl	74_37	-1	known	missense	c.137	p.T46I	0.021	pfscan_GPCR_2_extracellular_dom,prints_GPCR_2_VIP_rcpt_2	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_VIP_rcpt_2,prints_GPCR_2_secretin-like,prints_GPCR_2_VIP_rcpt	-	no_errors	VIPR2	HGNC	ENSG00000106018				393	0	0	272	80	22.7273
FTSJ2	0	genome.wustl.edu	37	7	2279097	2279097	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	2279097	2279097	G	A	SNP	FTSJ2	ENST00000242257	human	ensembl	74_37	-1	known	missense	c.254	p.A85V	0.998	pfam_rRNA_MeTrfase_FtsJ_dom,pirsf_rRNA-MeTfrase_E	pfam_rRNA_MeTrfase_FtsJ_dom,pirsf_rRNA-MeTfrase_E	-	no_errors	FTSJ2	HGNC	ENSG00000122687				26	0	0	19	5	20.8333
KLHL7	0	genome.wustl.edu	37	7	23164385	23164385	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	23164385	23164385	T	C	SNP	KLHL7	ENST00000339077	human	ensembl	74_37	+1	known	missense	c.302	p.F101S	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL7	HGNC	ENSG00000122550				151	0	0	87	27	23.6842
TRA2A	0	genome.wustl.edu	37	7	23547109	23547109	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	23547109	23547109	G	A	SNP	TRA2A	ENST00000297071	human	ensembl	74_37	-1	known	missense	c.571	p.R191W	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TRA2A	HGNC	ENSG00000164548				239	0	0	168	60	26.3158
DFNA5	0	genome.wustl.edu	37	7	24738827	24738827	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	24738827	24738827	T	G	SNP	DFNA5	ENST00000342947	human	ensembl	74_37	-1	known	missense	c.1309	p.T437P	0.950	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	DFNA5	HGNC	ENSG00000105928				75	0	0	56	24	30
BRAT1	0	genome.wustl.edu	37	7	2594050	2594050	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	2594050	2594050	C	T	SNP	BRAT1	ENST00000340611	human	ensembl	74_37	-1	known	missense	c.16	p.A6T	0.833	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	BRAT1	HGNC	ENSG00000106009				59	0	0	39	18	31.5789
HOXA1	0	genome.wustl.edu	37	7	27135386	27135386	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	27135386	27135386	C	T	SNP	HOXA1	ENST00000343060	human	ensembl	74_37	-1	known	missense	c.146	p.G49D	0.998	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	HOXA1	HGNC	ENSG00000105991				98	0	0	87	24	21.6216
HOXA-AS3	0	genome.wustl.edu	37	7	27194919	27194919	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	27194919	27194919	C	T	SNP	HOXA-AS3	ENST00000518947	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.099	-	-	-	no_errors	HOXA-AS3	HGNC	ENSG00000254369				28	0	0	24	14	36.8421
INMT	0	genome.wustl.edu	37	7	30795381	30795381	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	30795381	30795381	C	A	SNP	INMT	ENST00000013222	human	ensembl	74_37	+1	known	missense	c.706	p.L236I	0.000	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	INMT	HGNC	ENSG00000241644				154	0	0	117	35	23.0263
RP9	0	genome.wustl.edu	37	7	33136929	33136929	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	33136929	33136929	C	T	SNP	RP9	ENST00000297157	human	ensembl	74_37	-1	known	missense	c.359	p.C120Y	1.000	NULL	NULL	-	no_errors	RP9	HGNC	ENSG00000164610				178	0	0	121	29	19.3333
BBS9	0	genome.wustl.edu	37	7	33296948	33296948	+	Silent	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	33296948	33296948	T	G	SNP	BBS9	ENST00000242067	human	ensembl	74_37	+1	known	silent	c.543	p.P181	0.979	NULL	NULL	-	no_errors	BBS9	HGNC	ENSG00000122507				211	0	0	151	31	17.033
NPSR1	0	genome.wustl.edu	37	7	34917702	34917702	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	34917702	34917702	G	A	SNP	NPSR1	ENST00000359791	human	ensembl	74_37	+1	known	missense	c.1040	p.R347H	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Vasoprsn_rcpt	-	no_errors	NPSR1	HGNC	ENSG00000187258				23	0	0	20	6	23.0769
NPSR1	0	genome.wustl.edu	37	7	34917721	34917721	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	34917721	34917721	G	A	SNP	NPSR1	ENST00000359791	human	ensembl	74_37	+1	known	silent	c.1059	p.A353	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Vasoprsn_rcpt	-	no_errors	NPSR1	HGNC	ENSG00000187258				27	0	0	21	7	25
INHBA	0	genome.wustl.edu	37	7	41729889	41729889	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	41729889	41729889	G	A	SNP	INHBA	ENST00000242208	human	ensembl	74_37	-1	known	missense	c.640	p.R214W	0.997	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaA,prints_Inhibin_asu	-	no_errors	INHBA	HGNC	ENSG00000122641				55	0	0	57	10	14.9254
GLI3	0	genome.wustl.edu	37	7	42085063	42085063	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	42085063	42085063	C	T	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.746	p.S249N	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				147	0	0	85	28	24.7788
C7orf25	0	genome.wustl.edu	37	7	42950002	42950002	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	42950002	42950002	G	A	SNP	C7orf25	ENST00000431882	human	ensembl	74_37	-1	known	silent	c.672	p.I224	0.990	pfam_DUF1308	pfam_DUF1308	-	no_errors	C7orf25	HGNC	ENSG00000136197				142	0	0	103	30	22.5564
COA1	0	genome.wustl.edu	37	7	43684886	43684886	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	43684886	43684886	G	A	SNP	COA1	ENST00000223336	human	ensembl	74_37	-1	known	silent	c.228	p.I76	0.000	NULL	NULL	-	no_errors	COA1	HGNC	ENSG00000106603				79	0	0	69	21	23.3333
NPC1L1	0	genome.wustl.edu	37	7	44579262	44579262	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	44579262	44579262	T	G	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	missense	c.734	p.E245A	0.113	NULL	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520				87	0	0	56	27	32.5301
NPC1L1	0	genome.wustl.edu	37	7	44579700	44579700	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	44579700	44579700	A	G	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	missense	c.296	p.L99P	0.679	NULL	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520				67	0	0	49	18	26.8657
TNS3	0	genome.wustl.edu	37	7	47408881	47408881	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	47408881	47408881	G	T	SNP	TNS3	ENST00000311160	human	ensembl	74_37	-1	known	silent	c.1362	p.T454	0.001	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS3	HGNC	ENSG00000136205				87	0	0	73	23	23.9583
ABCA13	0	genome.wustl.edu	37	7	48319362	48319362	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	48319362	48319362	C	T	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	silent	c.8571	p.T2857	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869				190	0	0	127	37	22.561
COBL	0	genome.wustl.edu	37	7	51096683	51096683	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	51096683	51096683	C	T	SNP	COBL	ENST00000395542	human	ensembl	74_37	-1	known	missense	c.2356	p.G786S	0.996	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	COBL	HGNC	ENSG00000106078				139	0	0	109	41	27.3333
POM121L12	0	genome.wustl.edu	37	7	53104026	53104026	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	53104026	53104026	G	T	SNP	POM121L12	ENST00000408890	human	ensembl	74_37	+1	known	missense	c.662	p.S221I	0.000	NULL	NULL	-	no_errors	POM121L12	HGNC	ENSG00000221900				64	0	0	61	10	14.0845
ACTB	0	genome.wustl.edu	37	7	5567738	5567738	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	5567738	5567738	T	C	SNP	ACTB	ENST00000331789	human	ensembl	74_37	-1	known	missense	c.881	p.Y294C	0.999	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTB	HGNC	ENSG00000075624				253	0	0	194	59	23.3202
PHKG1	0	genome.wustl.edu	37	7	56148844	56148844	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	56148844	56148844	C	T	SNP	PHKG1	ENST00000452681	human	ensembl	74_37	-1	known	missense	c.1163	p.G388D	1.000	prints_Phosph_kin_gamma	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Phosph_kin_gamma	-	no_errors	PHKG1	HGNC	ENSG00000164776				85	0	0	73	36	33.0275
PMS2	0	genome.wustl.edu	37	7	6037037	6037037	+	Silent	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	6037037	6037037	A	C	SNP	PMS2	ENST00000265849	human	ensembl	74_37	-1	known	silent	c.723	p.P241	0.993	superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_DNA_mismatch_repair_N	pfam_MutL_C,pfam_DNA_mismatch_repair_C,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_MutL_C,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS2	HGNC	ENSG00000122512				39	0	0	27	6	18.1818
CYTH3	0	genome.wustl.edu	37	7	6210912	6210912	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	6210912	6210912	C	T	SNP	CYTH3	ENST00000350796	human	ensembl	74_37	-1	known	silent	c.483	p.E161	1.000	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	CYTH3	HGNC	ENSG00000008256				109	0	0	71	29	29
AUTS2	0	genome.wustl.edu	37	7	70255700	70255700	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	70255700	70255700	G	A	SNP	AUTS2	ENST00000342771	human	ensembl	74_37	+1	known	silent	c.3498	p.R1166	0.994	NULL	prints_AUTS2	-	no_errors	AUTS2	HGNC	ENSG00000158321				46	0	0	25	12	32.4324
BAZ1B	0	genome.wustl.edu	37	7	72884801	72884801	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	72884801	72884801	C	T	SNP	BAZ1B	ENST00000339594	human	ensembl	74_37	-1	known	missense	c.2606	p.R869H	0.983	superfamily_ARM-type_fold	pfam_WSTF_Acf1_Cbp146,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_WSTF_Acf1_Cbp146,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ1B	HGNC	ENSG00000009954				180	0	0	145	40	21.6216
MLXIPL	0	genome.wustl.edu	37	7	73009996	73009996	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	73009996	73009996	G	A	SNP	MLXIPL	ENST00000313375	human	ensembl	74_37	-1	known	missense	c.2281	p.R761C	0.996	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MLXIPL	HGNC	ENSG00000009950				93	0	0	58	14	19.4444
RHBDD2	0	genome.wustl.edu	37	7	75517524	75517524	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	75517524	75517524	A	G	SNP	RHBDD2	ENST00000006777	human	ensembl	74_37	+1	known	missense	c.952	p.S318G	0.000	NULL	pfam_Peptidase_S54_rhomboid_dom	-	no_errors	RHBDD2	HGNC	ENSG00000005486				274	0	0	182	53	22.5532
HGF	0	genome.wustl.edu	37	7	81346622	81346622	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	81346622	81346622	T	C	SNP	HGF	ENST00000222390	human	ensembl	74_37	-1	known	missense	c.1331	p.D444G	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGF	HGNC	ENSG00000019991				205	0	0	115	32	21.7687
CACNA2D1	0	genome.wustl.edu	37	7	81588629	81588629	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	81588629	81588629	G	A	SNP	CACNA2D1	ENST00000356253	human	ensembl	74_37	-1	known	nonsense	c.3157	p.R1053*	1.000	NULL	pfam_VDCC_a2/dsu,pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D1	HGNC	ENSG00000153956				164	0	0	108	32	22.8571
SEMA3E	0	genome.wustl.edu	37	7	83277848	83277848	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	83277848	83277848	G	A	SNP	SEMA3E	ENST00000307792	human	ensembl	74_37	-1	known	missense	c.11	p.A4V	0.015	NULL	pfam_Semap_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3E	HGNC	ENSG00000170381				46	0	0	39	11	22
ABCB4	0	genome.wustl.edu	37	7	87073078	87073078	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	87073078	87073078	A	G	SNP	ABCB4	ENST00000265723	human	ensembl	74_37	-1	known	silent	c.1131	p.I377	1.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB4	HGNC	ENSG00000005471				130	0	0	78	22	22
SUN1	0	genome.wustl.edu	37	7	881705	881705	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	881705	881705	G	A	SNP	SUN1	ENST00000456758	human	ensembl	74_37	+1	known	missense	c.563	p.R188Q	0.001	pfam_SUN1	pfam_SUN1,pfam_Sad1_UNC_C	-	no_errors	SUN1	HGNC	ENSG00000164828				72	0	0	46	19	29.2308
ZNF804B	0	genome.wustl.edu	37	7	88963047	88963047	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	88963047	88963047	T	C	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.751	p.S251P	0.995	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348				127	0	0	86	31	26.4957
ZNF804B	0	genome.wustl.edu	37	7	88964676	88964676	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	88964676	88964676	G	T	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	nonsense	c.2380	p.E794*	0.452	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348				116	0	0	56	25	30.8642
ANKIB1	0	genome.wustl.edu	37	7	92028112	92028112	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	92028112	92028112	A	C	SNP	ANKIB1	ENST00000265742	human	ensembl	74_37	+1	known	missense	c.3119	p.N1040T	0.359	NULL	pfam_Znf_C6HC,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Znf_RING,smart_Znf_C6HC,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif,pfscan_Znf_RING	-	no_errors	ANKIB1	HGNC	ENSG00000001629				36	0	0	17	7	29.1667
TECPR1	0	genome.wustl.edu	37	7	97861206	97861206	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	97861206	97861206	G	A	SNP	TECPR1	ENST00000379795	human	ensembl	74_37	-1	known	silent	c.1887	p.D629	0.983	NULL	pfam_Beta-propeller_rpt_TECPR,superfamily_RCC1/BLIP-II,smart_Beta-propeller_rpt_TECPR,smart_Peroxin/Ferlin	-	no_errors	TECPR1	HGNC	ENSG00000205356				40	0	0	24	8	25
BAIAP2L1	0	genome.wustl.edu	37	7	97944910	97944910	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	97944910	97944910	A	G	SNP	BAIAP2L1	ENST00000005260	human	ensembl	74_37	-1	known	silent	c.501	p.V167	0.007	pfam_IRSp53/MIM_homology_IMD	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2L1	HGNC	ENSG00000006453				122	0	0	105	36	25.5319
TMEM130	0	genome.wustl.edu	37	7	98453803	98453803	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	98453803	98453803	G	A	SNP	TMEM130	ENST00000416379	human	ensembl	74_37	-1	known	silent	c.555	p.T185	0.988	superfamily_PKD_dom,pfscan_PKD_dom	superfamily_PKD_dom,pfscan_PKD_dom	-	no_errors	TMEM130	HGNC	ENSG00000166448				44	0	0	38	8	17.3913
TRRAP	0	genome.wustl.edu	37	7	98609946	98609946	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	98609946	98609946	C	T	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	missense	c.11548	p.R3850C	1.000	pfscan_FATC	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367				19	0	0	10	4	28.5714
ZNF394	0	genome.wustl.edu	37	7	99091496	99091496	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	99091496	99091496	C	A	SNP	ZNF394	ENST00000337673	human	ensembl	74_37	-1	known	missense	c.1342	p.G448W	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF394	HGNC	ENSG00000160908				304	0	0	219	48	17.9775
SPDYE3	0	genome.wustl.edu	37	7	99917282	99917282	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	99917282	99917282	C	T	SNP	SPDYE3	ENST00000332397	human	ensembl	74_37	+1	known	missense	c.1441	p.R481C	0.000	pfam_Cell_cycle_regulatory_Spy1	pfam_Cell_cycle_regulatory_Spy1	-	no_errors	SPDYE3	HGNC	ENSG00000214300				153	0	0	116	26	18.3099
VPS13B	0	genome.wustl.edu	37	8	100866205	100866205	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	100866205	100866205	G	A	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	missense	c.10663	p.A3555T	0.004	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				211	0	0	178	46	20.5357
UBR5	0	genome.wustl.edu	37	8	103297393	103297393	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	103297393	103297393	C	T	SNP	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	silent	c.5658	p.A1886	0.322	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				176	0	0	128	35	21.4724
DCSTAMP	0	genome.wustl.edu	37	8	105361783	105361783	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	105361783	105361783	G	T	SNP	DCSTAMP	ENST00000297581	human	ensembl	74_37	+1	known	nonsense	c.1003	p.E335*	0.042	pfam_DC_STAMP-like,superfamily_ABC1_TM_dom	pfam_DC_STAMP-like,superfamily_ABC1_TM_dom	-	no_errors	DCSTAMP	HGNC	ENSG00000164935				381	1	0.26178	250	70	21.875
DPYS	0	genome.wustl.edu	37	8	105459576	105459576	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	105459576	105459576	C	T	SNP	DPYS	ENST00000351513	human	ensembl	74_37	-1	known	silent	c.579	p.A193	0.007	pfam_Amidohydro_1,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYS	HGNC	ENSG00000147647				110	0	0	75	33	30.5556
ZFPM2	0	genome.wustl.edu	37	8	106815064	106815064	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	106815064	106815064	A	G	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	silent	c.2754	p.K918	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946				52	0	0	43	14	24.5614
RSPO2	0	genome.wustl.edu	37	8	109001362	109001362	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	109001362	109001362	G	A	SNP	RSPO2	ENST00000276659	human	ensembl	74_37	-1	known	missense	c.205	p.R69C	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO2	HGNC	ENSG00000147655				113	0	0	88	25	22.1239
ENY2	0	genome.wustl.edu	37	8	110348379	110348379	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	110348379	110348379	C	T	SNP	ENY2	ENST00000521688	human	ensembl	74_37	+1	known	missense	c.29	p.A10V	1.000	NULL	pfam_TF_enhancer_of_yellow_2	-	no_errors	ENY2	HGNC	ENSG00000120533				37	0	0	45	9	16.6667
SYBU	0	genome.wustl.edu	37	8	110588045	110588045	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	110588045	110588045	T	A	SNP	SYBU	ENST00000276646	human	ensembl	74_37	-1	known	missense	c.1082	p.D361V	1.000	NULL	NULL	-	no_errors	SYBU	HGNC	ENSG00000147642				145	0	0	131	7	5.07246
CSMD3	0	genome.wustl.edu	37	8	113871489	113871489	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	113871489	113871489	G	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.1640	p.T547M	1.000	superfamily_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				137	0	0	92	31	25.2033
NEIL2	0	genome.wustl.edu	37	8	11643587	11643587	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	11643587	11643587	T	C	SNP	NEIL2	ENST00000284503	human	ensembl	74_37	+1	known	silent	c.804	p.S268	0.025	pfam_DNA_glyclase/AP_lyase_DNA-bd,superfamily_Ribosomal_S13-like_H2TH	pfam_DNA_glyclase/AP_lyase_DNA-bd,pfam_DNA_glycosylase/AP_lyase_cat,superfamily_Ribosomal_S13-like_H2TH,pfscan_Znf_DNA_glyclase/AP_lyase,pfscan_DNA_glycosylase/AP_lyase_cat	-	no_errors	NEIL2	HGNC	ENSG00000154328				207	0	0	148	48	24.4898
EXT1	0	genome.wustl.edu	37	8	118847717	118847717	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	118847717	118847717	G	A	SNP	EXT1	ENST00000378204	human	ensembl	74_37	-1	known	missense	c.1130	p.A377V	1.000	pfam_Exostosin	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXT1	HGNC	ENSG00000182197				111	0	0	94	28	22.9508
SNTB1	0	genome.wustl.edu	37	8	121823613	121823613	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	121823613	121823613	G	A	SNP	SNTB1	ENST00000395601	human	ensembl	74_37	-1	known	silent	c.471	p.G157	0.996	pfam_PDZ,superfamily_PDZ,smart_Pleckstrin_homology,smart_PDZ,pfscan_PDZ,pfscan_Pleckstrin_homology	pfam_PDZ,pfam_Pleckstrin_homology,superfamily_PDZ,smart_Pleckstrin_homology,smart_PDZ,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTB1	HGNC	ENSG00000172164				66	0	0	47	21	30.8824
ZHX2	0	genome.wustl.edu	37	8	123965008	123965008	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	123965008	123965008	C	T	SNP	ZHX2	ENST00000314393	human	ensembl	74_37	+1	known	missense	c.1258	p.R420C	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZHX2	HGNC	ENSG00000178764				42	0	0	30	9	23.0769
ATAD2	0	genome.wustl.edu	37	8	124371546	124371546	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	124371546	124371546	T	C	SNP	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	missense	c.1297	p.N433D	0.780	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802				274	0	0	194	66	25.3846
FER1L6	0	genome.wustl.edu	37	8	125022838	125022838	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	125022838	125022838	T	C	SNP	FER1L6	ENST00000399018	human	ensembl	74_37	+1	known	missense	c.1705	p.Y569H	1.000	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,superfamily_ABC1_TM_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	FER1L6	HGNC	ENSG00000214814				211	0	0	168	49	22.5806
TMEM65	0	genome.wustl.edu	37	8	125332355	125332355	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	125332355	125332355	A	G	SNP	TMEM65	ENST00000297632	human	ensembl	74_37	-1	known	missense	c.593	p.M198T	1.000	pfam_Transmembrane_protein_65	pfam_Transmembrane_protein_65	-	no_errors	TMEM65	HGNC	ENSG00000164983				194	0	0	159	27	14.5161
WISP1	0	genome.wustl.edu	37	8	134232963	134232963	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	134232963	134232963	G	A	SNP	WISP1	ENST00000250160	human	ensembl	74_37	+1	known	silent	c.489	p.P163	0.017	pfam_VWF_C,smart_VWF_C,pirsf_IGFBP_CNN,pfscan_VWF_C	pfam_IGFBP-like,pfam_VWF_C,pfam_Cys_knot,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	WISP1	HGNC	ENSG00000104415				65	0	0	51	10	16.3934
ZFAT	0	genome.wustl.edu	37	8	135614542	135614542	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	135614542	135614542	G	A	SNP	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	missense	c.1420	p.R474C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827				61	0	0	62	10	13.8889
GSDMD	0	genome.wustl.edu	37	8	144643943	144643943	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	144643943	144643943	G	A	SNP	GSDMD	ENST00000262580	human	ensembl	74_37	+1	known	nonsense	c.768	p.W256*	0.000	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMD	HGNC	ENSG00000104518				17	0	0	12	4	25
PYCRL	0	genome.wustl.edu	37	8	144688646	144688646	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	144688646	144688646	G	A	SNP	PYCRL	ENST00000220966	human	ensembl	74_37	-1	known	silent	c.576	p.G192	0.160	superfamily_6-PGluconate_DH_C-like,pirsf_Pyrroline-COOH_reductase,tigrfam_Pyrroline-COOH_reductase	superfamily_6-PGluconate_DH_C-like,pirsf_Pyrroline-COOH_reductase,tigrfam_Pyrroline-COOH_reductase	-	no_errors	PYCRL	HGNC	ENSG00000104524				45	0	0	39	15	27.7778
EPPK1	0	genome.wustl.edu	37	8	144940503	144940503	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	144940503	144940503	C	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.6919	p.V2307I	1.000	smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				145	0	0	124	7	5.34351
PLEC	0	genome.wustl.edu	37	8	144990747	144990747	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	144990747	144990747	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.13653	p.R4551	0.996	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				87	0	0	68	20	22.7273
KIFC2	0	genome.wustl.edu	37	8	145694141	145694141	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	145694141	145694141	G	A	SNP	KIFC2	ENST00000301332	human	ensembl	74_37	+1	known	missense	c.1037	p.G346D	1.000	superfamily_Prefoldin	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIFC2	HGNC	ENSG00000167702				177	0	0	135	44	24.581
ARHGAP39	0	genome.wustl.edu	37	8	145771001	145771001	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	145771001	145771001	T	C	SNP	ARHGAP39	ENST00000377307	human	ensembl	74_37	-1	known	missense	c.2153	p.N718S	1.000	NULL	pfam_RhoGAP_dom,pfam_MyTH4_dom,superfamily_Rho_GTPase_activation_prot,superfamily_WW_dom,smart_WW_dom,smart_MyTH4_dom,smart_RhoGAP_dom,pfscan_MyTH4_dom,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP39	HGNC	ENSG00000147799				61	0	0	47	9	16.0714
RPL8	0	genome.wustl.edu	37	8	146015267	146015267	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	146015267	146015267	G	A	SNP	RPL8	ENST00000262584	human	ensembl	74_37	-1	known	silent	c.696	p.G232	0.969	superfamily_Translation_prot_SH3-like,pirsf_Ribosomal_L2	pfam_Ribosomal_L2_C,pfam_Rbsml_prot_L2_RNA-bd_dom,superfamily_Translation_prot_SH3-like,superfamily_NA-bd_OB-fold,pirsf_Ribosomal_L2	-	no_errors	RPL8	HGNC	ENSG00000161016				232	0	0	185	62	25.1012
SLC7A2	0	genome.wustl.edu	37	8	17409424	17409424	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	17409424	17409424	G	A	SNP	SLC7A2	ENST00000004531	human	ensembl	74_37	+1	known	silent	c.1104	p.A368	0.162	pfam_AA-permease/SLC12A_dom,tigrfam_Cat_AA_permease	pfam_AA-permease/SLC12A_dom,tigrfam_Cat_AA_permease	-	no_errors	SLC7A2	HGNC	ENSG00000003989				220	0	0	168	63	27.2727
FGL1	0	genome.wustl.edu	37	8	17726129	17726129	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	17726129	17726129	G	A	SNP	FGL1	ENST00000381840	human	ensembl	74_37	-1	known	missense	c.707	p.T236M	0.997	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGL1	HGNC	ENSG00000104760				284	1	0.350877	242	27	10.0372
NAT2	0	genome.wustl.edu	37	8	18257712	18257712	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	18257712	18257712	T	C	SNP	NAT2	ENST00000286479	human	ensembl	74_37	+1	known	missense	c.199	p.W67R	1.000	pfam_Arylamine_N-AcTrfase,prints_Arylamine_N-AcTrfase	pfam_Arylamine_N-AcTrfase,prints_Arylamine_N-AcTrfase	-	no_errors	NAT2	HGNC	ENSG00000156006				204	0	0	147	44	23.0366
ATP6V1B2	0	genome.wustl.edu	37	8	20070374	20070374	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	20070374	20070374	T	C	SNP	ATP6V1B2	ENST00000276390	human	ensembl	74_37	+1	known	silent	c.885	p.V295	0.982	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,superfamily_P-loop_NTPase,tigrfam_ATPase_V1-cplx_bsu	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,pfam_ATPase_F1/V1/A1-cplx_a/bsu_C,pfam_ATPase_F1_a/bsu_N,superfamily_P-loop_NTPase,superfamily_ATPase_F1/V1/A1-cplx_a/bsu_C,tigrfam_ATPase_V1-cplx_bsu	-	no_errors	ATP6V1B2	HGNC	ENSG00000147416				279	0	0	231	76	24.7557
NPM2	0	genome.wustl.edu	37	8	21891684	21891684	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	21891684	21891684	G	T	SNP	NPM2	ENST00000397940	human	ensembl	74_37	+1	known	missense	c.429	p.E143D	0.050	NULL	superfamily_Nucleoplasmin_core_dom	-	no_errors	NPM2	HGNC	ENSG00000158806				131	0	0	63	18	22.2222
NPM2	0	genome.wustl.edu	37	8	21891687	21891687	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	21891687	21891687	A	T	SNP	NPM2	ENST00000397940	human	ensembl	74_37	+1	known	missense	c.432	p.E144D	0.000	NULL	superfamily_Nucleoplasmin_core_dom	-	no_errors	NPM2	HGNC	ENSG00000158806				134	0	0	59	19	24.359
NPM2	0	genome.wustl.edu	37	8	21891690	21891690	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	21891690	21891690	T	G	SNP	NPM2	ENST00000397940	human	ensembl	74_37	+1	known	missense	c.435	p.D145E	0.000	NULL	superfamily_Nucleoplasmin_core_dom	-	no_errors	NPM2	HGNC	ENSG00000158806				130	0	0	58	19	24.6753
REEP4	0	genome.wustl.edu	37	8	21997010	21997010	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	21997010	21997010	C	T	SNP	REEP4	ENST00000306306	human	ensembl	74_37	-1	known	silent	c.336	p.E112	1.000	NULL	pfam_TB2_DP1_HVA22	-	no_errors	REEP4	HGNC	ENSG00000168476				60	0	0	40	15	27.2727
SORBS3	0	genome.wustl.edu	37	8	22415705	22415705	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	22415705	22415705	G	A	SNP	SORBS3	ENST00000240123	human	ensembl	74_37	+1	known	missense	c.478	p.D160N	1.000	smart_Sorb,pfscan_Sorb	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,prints_p67phox,prints_SH3_domain,pfscan_Sorb,pfscan_SH3_domain	-	no_errors	SORBS3	HGNC	ENSG00000120896				92	0	0	80	5	5.88235
PDLIM2	0	genome.wustl.edu	37	8	22452098	22452098	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	22452098	22452098	T	C	SNP	PDLIM2	ENST00000265810	human	ensembl	74_37	+1	known	missense	c.1037	p.M346T	0.000	NULL	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDLIM2	HGNC	ENSG00000120913				150	0	0	119	37	23.7179
EBF2	0	genome.wustl.edu	37	8	25718687	25718687	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	25718687	25718687	C	T	SNP	EBF2	ENST00000520164	human	ensembl	74_37	-1	known	missense	c.1220	p.R407K	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF2	HGNC	ENSG00000221818				176	0	0	167	39	18.932
SCARA3	0	genome.wustl.edu	37	8	27516154	27516154	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	27516154	27516154	C	T	SNP	SCARA3	ENST00000301904	human	ensembl	74_37	+1	known	missense	c.467	p.A156V	1.000	NULL	pfam_Collagen	-	no_errors	SCARA3	HGNC	ENSG00000168077				137	0	0	131	8	5.7554
CSMD1	0	genome.wustl.edu	37	8	3045475	3045475	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	3045475	3045475	T	C	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.5539	p.S1847G	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				38	0	0	23	12	34.2857
PURG	0	genome.wustl.edu	37	8	30889719	30889719	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	30889719	30889719	G	A	SNP	PURG	ENST00000475541	human	ensembl	74_37	-1	known	missense	c.580	p.R194C	0.992	pfam_PUR_DNA_RNA-bd,smart_PUR_DNA_RNA-bd	pfam_PUR_DNA_RNA-bd,smart_PUR_DNA_RNA-bd	-	no_errors	PURG	HGNC	ENSG00000172733				178	0	0	125	41	24.6988
NRG1	0	genome.wustl.edu	37	8	32505416	32505416	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	32505416	32505416	G	A	SNP	NRG1	ENST00000520502	human	ensembl	74_37	+1	known	silent	c.180	p.A60	1.000	NULL	smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	NRG1	HGNC	ENSG00000157168				109	0	0	84	21	20
NRG1	0	genome.wustl.edu	37	8	32617802	32617802	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	32617802	32617802	C	T	SNP	NRG1	ENST00000338921	human	ensembl	74_37	+1	known	silent	c.1170	p.S390	1.000	pfam_Neuregulin_1_C,prints_Neuregulin	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Ig-like_dom,prints_Neuregulin	-	no_errors	NRG1	HGNC	ENSG00000157168				268	0	0	201	58	22.3938
ERLIN2	0	genome.wustl.edu	37	8	37597886	37597886	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	37597886	37597886	C	T	SNP	ERLIN2	ENST00000276461	human	ensembl	74_37	+1	known	silent	c.111	p.G37	0.105	pfam_Band_7,smart_Band_7	pfam_Band_7,smart_Band_7	-	no_errors	ERLIN2	HGNC	ENSG00000147475				379	0	0	263	74	21.9585
GPR124	0	genome.wustl.edu	37	8	37688981	37688981	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	37688981	37688981	G	A	SNP	GPR124	ENST00000412232	human	ensembl	74_37	+1	known	missense	c.973	p.E325K	0.988	smart_Ig_sub,pfscan_Ig-like_dom	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR124	HGNC	ENSG00000020181				70	0	0	43	17	28.3333
TM2D2	0	genome.wustl.edu	37	8	38851132	38851132	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	38851132	38851132	G	A	SNP	TM2D2	ENST00000456397	human	ensembl	74_37	-1	known	silent	c.363	p.C121	0.997	NULL	pfam_TM2	-	no_errors	TM2D2	HGNC	ENSG00000169490				121	0	0	66	17	20.4819
KAT6A	0	genome.wustl.edu	37	8	41791956	41791956	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	41791956	41791956	G	T	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	missense	c.3782	p.P1261H	0.998	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168				45	0	0	20	8	28.5714
IKBKB	0	genome.wustl.edu	37	8	42178357	42178357	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	42178357	42178357	C	T	SNP	IKBKB	ENST00000520655	human	ensembl	74_37	+1	known	nonsense	c.1621	p.R541*	0.596	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ubiquitin_supergroup,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	IKBKB	HGNC	ENSG00000104365				76	0	0	62	17	21.519
NPBWR1	0	genome.wustl.edu	37	8	53852765	53852765	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	53852765	53852765	C	T	SNP	NPBWR1	ENST00000331251	human	ensembl	74_37	+1	known	missense	c.298	p.R100W	0.955	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Opioid_rcpt	-	no_errors	NPBWR1	HGNC	ENSG00000183729				28	0	0	21	4	16
PENK	0	genome.wustl.edu	37	8	57358398	57358398	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	57358398	57358398	G	A	SNP	PENK	ENST00000314922	human	ensembl	74_37	-1	known	missense	c.115	p.R39C	0.966	pfam_Opioid_neupept,prints_Proenkphlin_A	pfam_Opioid_neupept,prints_Proenkphlin_A,prints_Opioid_neupept	-	no_errors	PENK	HGNC	ENSG00000181195				72	0	0	34	19	35.8491
PENK	0	genome.wustl.edu	37	8	57358505	57358505	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	57358505	57358505	C	T	SNP	PENK	ENST00000314922	human	ensembl	74_37	-1	known	missense	c.8	p.R3Q	0.980	NULL	pfam_Opioid_neupept,prints_Proenkphlin_A,prints_Opioid_neupept	-	no_errors	PENK	HGNC	ENSG00000181195				24	0	0	9	7	43.75
CYP7A1	0	genome.wustl.edu	37	8	59409729	59409729	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	59409729	59409729	A	C	SNP	CYP7A1	ENST00000301645	human	ensembl	74_37	-1	known	missense	c.342	p.I114M	0.991	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I	-	no_errors	CYP7A1	HGNC	ENSG00000167910				142	0	0	99	30	23.2558
ARMC1	0	genome.wustl.edu	37	8	66534566	66534566	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	66534566	66534566	G	A	SNP	ARMC1	ENST00000458464	human	ensembl	74_37	-1	known	missense	c.91	p.P31S	1.000	NULL	superfamily_HeavyMe-assoc_HMA	-	no_errors	ARMC1	HGNC	ENSG00000104442				224	0	0	147	53	26.5
VCPIP1	0	genome.wustl.edu	37	8	67547088	67547088	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	67547088	67547088	C	T	SNP	VCPIP1	ENST00000310421	human	ensembl	74_37	-1	known	missense	c.3317	p.R1106Q	1.000	NULL	pfam_OTU,pfscan_OTU	-	no_errors	VCPIP1	HGNC	ENSG00000175073				222	0	0	133	48	26.5193
CPA6	0	genome.wustl.edu	37	8	68396023	68396023	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	68396023	68396023	T	C	SNP	CPA6	ENST00000297770	human	ensembl	74_37	-1	known	missense	c.818	p.N273S	1.000	pfam_Peptidase_M14,smart_Peptidase_M14,prints_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA6	HGNC	ENSG00000165078				333	0	0	254	77	23.2628
PREX2	0	genome.wustl.edu	37	8	68942753	68942753	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	68942753	68942753	C	T	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.565	p.R189W	0.995	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889				82	0	0	62	20	24.3902
KCNB2	0	genome.wustl.edu	37	8	73849351	73849351	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	73849351	73849351	C	T	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	silent	c.1761	p.A587	0.033	pfam_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				111	0	0	70	23	24.7312
PI15	0	genome.wustl.edu	37	8	75737662	75737662	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	75737662	75737662	C	T	SNP	PI15	ENST00000260113	human	ensembl	74_37	+1	known	missense	c.178	p.R60C	1.000	superfamily_CAP_domain	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	PI15	HGNC	ENSG00000137558				137	0	0	102	26	20.3125
HNF4G	0	genome.wustl.edu	37	8	76471161	76471161	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	76471161	76471161	C	T	SNP	HNF4G	ENST00000396423	human	ensembl	74_37	+1	known	missense	c.982	p.L328F	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4G	HGNC	ENSG00000164749				164	0	0	113	39	25.6579
ZFHX4	0	genome.wustl.edu	37	8	77765551	77765551	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	77765551	77765551	C	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.6394	p.P2132T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				43	0	0	35	7	16.6667
FAM86B3P	0	genome.wustl.edu	37	8	8095990	8095990	+	RNA	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	8095990	8095990	C	G	SNP	FAM86B3P	ENST00000590591	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	FAM86B3P	HGNC	ENSG00000173295				11	0	0	5	3	37.5
KIAA1429	0	genome.wustl.edu	37	8	95502202	95502202	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	95502202	95502202	C	T	SNP	KIAA1429	ENST00000297591	human	ensembl	74_37	-1	known	missense	c.5249	p.G1750D	0.998	NULL	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944				135	0	0	90	26	22.4138
GDF6	0	genome.wustl.edu	37	8	97156813	97156813	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	97156813	97156813	A	G	SNP	GDF6	ENST00000287020	human	ensembl	74_37	-1	known	missense	c.1346	p.V449A	1.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF6	HGNC	ENSG00000156466				24	0	0	21	7	25
MTERFD1	0	genome.wustl.edu	37	8	97270799	97270799	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	97270799	97270799	G	A	SNP	MTERFD1	ENST00000287025	human	ensembl	74_37	-1	known	silent	c.120	p.G40	0.006	NULL	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD1	HGNC	ENSG00000156469				333	0	0	227	53	18.9286
TDRD7	0	genome.wustl.edu	37	9	100245400	100245400	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	100245400	100245400	C	T	SNP	TDRD7	ENST00000355295	human	ensembl	74_37	+1	known	silent	c.2682	p.S894	0.001	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD7	HGNC	ENSG00000196116				104	0	0	78	28	26.4151
TMOD1	0	genome.wustl.edu	37	9	100353681	100353681	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	100353681	100353681	C	T	SNP	TMOD1	ENST00000259365	human	ensembl	74_37	+1	known	missense	c.979	p.R327W	0.995	NULL	pfam_Tropomodulin	-	no_errors	TMOD1	HGNC	ENSG00000136842				148	0	0	134	38	22.093
GABBR2	0	genome.wustl.edu	37	9	101258740	101258740	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	101258740	101258740	G	A	SNP	GABBR2	ENST00000259455	human	ensembl	74_37	-1	known	silent	c.687	p.T229	0.002	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B2,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,prints_GPCR_3,pfscan_GPCR_3_C	-	no_errors	GABBR2	HGNC	ENSG00000136928				90	0	0	67	15	18.2927
NR4A3	0	genome.wustl.edu	37	9	102590423	102590423	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	102590423	102590423	C	T	SNP	NR4A3	ENST00000330847	human	ensembl	74_37	+1	known	silent	c.132	p.P44	0.002	prints_Nuc_orph_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NOR1_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A3	HGNC	ENSG00000119508				129	0	0	94	32	25.3968
MSANTD3	0	genome.wustl.edu	37	9	103204533	103204533	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	103204533	103204533	G	A	SNP	MSANTD3	ENST00000395067	human	ensembl	74_37	+1	known	missense	c.313	p.V105I	0.995	NULL	NULL	-	no_errors	MSANTD3	HGNC	ENSG00000066697				66	0	0	59	16	21.3333
ACTL7B	0	genome.wustl.edu	37	9	111617246	111617246	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	111617246	111617246	C	T	SNP	ACTL7B	ENST00000374667	human	ensembl	74_37	-1	known	missense	c.965	p.C322Y	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL7B	HGNC	ENSG00000148156				105	0	0	62	18	22.5
ACTL7B	0	genome.wustl.edu	37	9	111617489	111617489	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	111617489	111617489	C	T	SNP	ACTL7B	ENST00000374667	human	ensembl	74_37	-1	known	missense	c.722	p.G241D	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL7B	HGNC	ENSG00000148156				80	0	0	45	16	26.2295
PALM2-AKAP2	0	genome.wustl.edu	37	9	112900030	112900030	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	112900030	112900030	G	A	SNP	PALM2-AKAP2	ENST00000374530	human	ensembl	74_37	+1	known	missense	c.2206	p.A736T	1.000	NULL	pfam_Paralemmin,pfam_RII_binding_1	-	no_errors	PALM2-AKAP2	HGNC	ENSG00000157654				163	0	0	142	52	26.8041
SVEP1	0	genome.wustl.edu	37	9	113197545	113197545	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	113197545	113197545	C	T	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.4864	p.D1622N	0.221	superfamily_ConA-like_lec_gl_sf,smart_Pentaxin	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124				163	0	0	120	31	20.5298
SVEP1	0	genome.wustl.edu	37	9	113228188	113228188	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	113228188	113228188	G	A	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	silent	c.3279	p.T1093	0.968	pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Growth_fac_rcpt_N_dom	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124				48	0	0	22	6	21.4286
WDR31	0	genome.wustl.edu	37	9	116079151	116079151	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	116079151	116079151	A	G	SNP	WDR31	ENST00000374193	human	ensembl	74_37	-1	known	silent	c.982	p.L328	0.725	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR31	HGNC	ENSG00000148225				91	0	0	78	26	25
C9orf43	0	genome.wustl.edu	37	9	116187629	116187629	+	Silent	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	116187629	116187629	A	C	SNP	C9orf43	ENST00000288462	human	ensembl	74_37	+1	known	silent	c.871	p.R291	0.000	NULL	NULL	-	no_errors	C9orf43	HGNC	ENSG00000157653				82	0	0	76	7	8.43373
RGS3	0	genome.wustl.edu	37	9	116269753	116269753	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	116269753	116269753	C	A	SNP	RGS3	ENST00000350696	human	ensembl	74_37	+1	known	nonsense	c.1272	p.C424*	1.000	NULL	pfam_RGS_dom,pfam_C2_dom,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_C2_dom,superfamily_PDZ,smart_C2_dom,smart_PDZ,smart_Regulat_G_prot_signal_superfam,pfscan_C2_dom,pfscan_PDZ,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS3	HGNC	ENSG00000138835				28	0	0	20	6	23.0769
RGS3	0	genome.wustl.edu	37	9	116276899	116276899	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	116276899	116276899	G	A	SNP	RGS3	ENST00000350696	human	ensembl	74_37	+1	known	missense	c.1639	p.A547T	1.000	NULL	pfam_RGS_dom,pfam_C2_dom,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_C2_dom,superfamily_PDZ,smart_C2_dom,smart_PDZ,smart_Regulat_G_prot_signal_superfam,pfscan_C2_dom,pfscan_PDZ,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS3	HGNC	ENSG00000138835				112	0	0	71	23	24.4681
ZNF618	0	genome.wustl.edu	37	9	116811442	116811442	+	Silent	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	116811442	116811442	G	T	SNP	ZNF618	ENST00000374126	human	ensembl	74_37	+1	known	silent	c.1860	p.R620	1.000	superfamily_RNaseH-like_dom	superfamily_RNaseH-like_dom,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF618	HGNC	ENSG00000157657				170	0	0	128	27	17.4194
COL27A1	0	genome.wustl.edu	37	9	116930239	116930239	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	116930239	116930239	C	T	SNP	COL27A1	ENST00000356083	human	ensembl	74_37	+1	known	missense	c.404	p.T135M	0.881	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL27A1	HGNC	ENSG00000196739				87	0	0	67	21	23.8636
COL27A1	0	genome.wustl.edu	37	9	116930829	116930829	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	116930829	116930829	G	A	SNP	COL27A1	ENST00000356083	human	ensembl	74_37	+1	known	missense	c.994	p.A332T	0.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL27A1	HGNC	ENSG00000196739				80	0	0	54	15	21.7391
ORM1	0	genome.wustl.edu	37	9	117085980	117085980	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	117085980	117085980	G	A	SNP	ORM1	ENST00000259396	human	ensembl	74_37	+1	known	missense	c.152	p.R51Q	0.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,pirsf_A1A_glycop,prints_A1A_glycop	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,pirsf_A1A_glycop,prints_A1A_glycop	-	no_errors	ORM1	HGNC	ENSG00000229314				93	0	0	66	23	25.8427
AKNA	0	genome.wustl.edu	37	9	117139520	117139520	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	117139520	117139520	G	A	SNP	AKNA	ENST00000307564	human	ensembl	74_37	-1	known	silent	c.567	p.V189	0.094	NULL	pfam_TF_AT-hook	-	no_errors	AKNA	HGNC	ENSG00000106948				137	1	0.724638	82	30	26.7857
CDK5RAP2	0	genome.wustl.edu	37	9	123165217	123165217	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	123165217	123165217	C	T	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.5174	p.R1725H	0.181	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861				116	0	0	77	30	28.0374
C5	0	genome.wustl.edu	37	9	123742388	123742388	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	123742388	123742388	C	T	SNP	C5	ENST00000223642	human	ensembl	74_37	-1	known	missense	c.3631	p.A1211T	0.001	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_Macroglobln_a2,pfam_A2M_N_2,pfam_A-macroglobulin_rcpt-bd,pfam_Netrin_module_non-TIMP,pfam_A2M_N,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain,prints_Anaphylatoxn_comp_syst_dom	-	no_errors	C5	HGNC	ENSG00000106804				167	0	0	119	37	23.7179
PTGS1	0	genome.wustl.edu	37	9	125143952	125143952	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	125143952	125143952	G	A	SNP	PTGS1	ENST00000362012	human	ensembl	74_37	+1	known	missense	c.688	p.G230S	0.915	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_EG-like_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	PTGS1	HGNC	ENSG00000095303				56	0	0	41	12	22.6415
OR1N1	0	genome.wustl.edu	37	9	125289221	125289221	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	125289221	125289221	A	C	SNP	OR1N1	ENST00000304880	human	ensembl	74_37	-1	known	missense	c.352	p.Y118D	0.971	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1N1	HGNC	ENSG00000171505				82	0	0	53	10	15.873
OR1Q1	0	genome.wustl.edu	37	9	125377563	125377563	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	125377563	125377563	G	A	SNP	OR1Q1	ENST00000297913	human	ensembl	74_37	+1	known	missense	c.547	p.A183T	0.052	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1Q1	HGNC	ENSG00000165202				224	0	0	163	50	23.4742
OR1L1	0	genome.wustl.edu	37	9	125424142	125424142	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	125424142	125424142	C	T	SNP	OR1L1	ENST00000373686	human	ensembl	74_37	+1	known	missense	c.298	p.R100C	0.020	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1L1	HGNC	ENSG00000173679				229	0	0	172	49	22.1719
CRB2	0	genome.wustl.edu	37	9	126129579	126129579	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	126129579	126129579	G	A	SNP	CRB2	ENST00000373631	human	ensembl	74_37	+1	known	missense	c.883	p.A295T	0.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	CRB2	HGNC	ENSG00000148204				57	0	0	42	7	14.2857
WDR38	0	genome.wustl.edu	37	9	127616498	127616498	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	127616498	127616498	C	A	SNP	WDR38	ENST00000373574	human	ensembl	74_37	+1	known	silent	c.84	p.A28	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR38	HGNC	ENSG00000136918				377	0	0	272	78	22.2857
PBX3	0	genome.wustl.edu	37	9	128725361	128725361	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	128725361	128725361	A	G	SNP	PBX3	ENST00000373489	human	ensembl	74_37	+1	known	missense	c.1193	p.Y398C	1.000	NULL	pfam_PBX,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	PBX3	HGNC	ENSG00000167081				39	0	0	23	7	23.3333
FAM129B	0	genome.wustl.edu	37	9	130269612	130269612	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	130269612	130269612	C	T	SNP	FAM129B	ENST00000373312	human	ensembl	74_37	-1	known	missense	c.1753	p.A585T	0.003	NULL	pfscan_Pleckstrin_homology	-	no_errors	FAM129B	HGNC	ENSG00000136830				27	0	0	20	7	25.9259
MPDZ	0	genome.wustl.edu	37	9	13140138	13140138	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	13140138	13140138	T	C	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	missense	c.3851	p.Q1284R	1.000	NULL	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186				269	0	0	170	43	20.1878
C9orf114	0	genome.wustl.edu	37	9	131589411	131589411	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	131589411	131589411	G	A	SNP	C9orf114	ENST00000361256	human	ensembl	74_37	-1	known	missense	c.268	p.P90S	0.985	pfam_Put_MeTrfase	pfam_Put_MeTrfase,superfamily_NA-bd_OB-fold	-	no_errors	C9orf114	HGNC	ENSG00000198917				107	0	0	78	14	15.2174
DOLPP1	0	genome.wustl.edu	37	9	131847515	131847515	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	131847515	131847515	G	A	SNP	DOLPP1	ENST00000372546	human	ensembl	74_37	+1	known	missense	c.292	p.G98R	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	DOLPP1	HGNC	ENSG00000167130				174	0	0	96	31	24.4094
USP20	0	genome.wustl.edu	37	9	132637208	132637208	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	132637208	132637208	C	T	SNP	USP20	ENST00000315480	human	ensembl	74_37	+1	known	silent	c.2022	p.N674	0.915	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,pfam_Znf_UBP,smart_Znf_UBP,smart_Pept_C19_DUSP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP20	HGNC	ENSG00000136878				34	0	0	48	13	21.3115
LAMC3	0	genome.wustl.edu	37	9	133901719	133901719	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	133901719	133901719	C	T	SNP	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	missense	c.421	p.R141C	1.000	pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,pfscan_Laminin_N	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555				62	0	0	42	22	34.375
POMT1	0	genome.wustl.edu	37	9	134393862	134393862	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	134393862	134393862	G	A	SNP	POMT1	ENST00000372228	human	ensembl	74_37	+1	known	missense	c.1369	p.V457I	0.000	pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	pfam_Glyco_trans_39,pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	-	no_errors	POMT1	HGNC	ENSG00000130714				446	0	0	342	94	21.5596
NTNG2	0	genome.wustl.edu	37	9	135102276	135102276	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	135102276	135102276	G	A	SNP	NTNG2	ENST00000360670	human	ensembl	74_37	+1	known	missense	c.898	p.E300K	1.000	pfam_EGF_laminin,smart_EGF_laminin	pfam_Laminin_N,pfam_EGF_laminin,pfam_EGF_extracell,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	NTNG2	HGNC	ENSG00000196358				25	0	0	17	5	22.7273
AK8	0	genome.wustl.edu	37	9	135690055	135690055	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	135690055	135690055	T	C	SNP	AK8	ENST00000298545	human	ensembl	74_37	-1	known	missense	c.949	p.I317V	0.191	pfam_Adenylate_kin,superfamily_P-loop_NTPase	pfam_Adenylate_kin,superfamily_P-loop_NTPase,superfamily_Adenylate_kinase_lid-dom,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,prints_Adenylate_kin	-	no_errors	AK8	HGNC	ENSG00000165695				62	0	0	38	13	25.4902
GTF3C5	0	genome.wustl.edu	37	9	135906432	135906432	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	135906432	135906432	G	A	SNP	GTF3C5	ENST00000372108	human	ensembl	74_37	+1	known	missense	c.34	p.A12T	0.000	NULL	pfam_TF_IIIC_su-5	-	no_errors	GTF3C5	HGNC	ENSG00000148308				27	0	0	13	7	35
SURF1	0	genome.wustl.edu	37	9	136219368	136219368	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	136219368	136219368	A	C	SNP	SURF1	ENST00000371974	human	ensembl	74_37	-1	known	missense	c.684	p.H228Q	0.994	pfam_Surf1/Shy1,pfscan_Surf1/Shy1	pfam_Surf1/Shy1,pfscan_Surf1/Shy1	-	no_errors	SURF1	HGNC	ENSG00000148290				111	0	0	89	17	16.0377
C9orf96	0	genome.wustl.edu	37	9	136262382	136262382	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	136262382	136262382	A	G	SNP	C9orf96	ENST00000371957	human	ensembl	74_37	+1	known	missense	c.958	p.T320A	0.072	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	C9orf96	HGNC	ENSG00000198870				40	0	0	30	8	21.0526
VAV2	0	genome.wustl.edu	37	9	136662911	136662911	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	136662911	136662911	T	C	SNP	VAV2	ENST00000371850	human	ensembl	74_37	-1	known	missense	c.857	p.Y286C	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH3_domain,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH2,prints_SH3_domain	-	no_errors	VAV2	HGNC	ENSG00000160293				49	0	0	38	3	7.31707
COL5A1	0	genome.wustl.edu	37	9	137591897	137591897	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	137591897	137591897	C	T	SNP	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	silent	c.420	p.Y140	0.982	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635				113	0	0	82	22	21.1538
FCN1	0	genome.wustl.edu	37	9	137804344	137804344	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	137804344	137804344	G	T	SNP	FCN1	ENST00000371806	human	ensembl	74_37	-1	known	missense	c.586	p.L196M	0.598	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,pfam_Collagen,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FCN1	HGNC	ENSG00000085265				32	0	0	20	9	31.0345
OLFM1	0	genome.wustl.edu	37	9	138011566	138011566	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	138011566	138011566	C	T	SNP	OLFM1	ENST00000371793	human	ensembl	74_37	+1	known	missense	c.1000	p.R334C	1.000	pfam_Olfac-like,superfamily_Quinonprotein_ADH-like_supfam,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,pfam_Noelin-1,superfamily_Quinonprotein_ADH-like_supfam,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFM1	HGNC	ENSG00000130558				92	0	0	45	27	37.5
SNAPC4	0	genome.wustl.edu	37	9	139278455	139278455	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	139278455	139278455	G	A	SNP	SNAPC4	ENST00000298532	human	ensembl	74_37	-1	known	missense	c.1450	p.P484S	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC	ENSG00000165684				61	0	0	40	9	18.3673
RABL6	0	genome.wustl.edu	37	9	139726288	139726288	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	139726288	139726288	C	T	SNP	RABL6	ENST00000371663	human	ensembl	74_37	+1	known	missense	c.574	p.R192C	1.000	superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,prints_Small_GTPase	-	no_errors	RABL6	HGNC	ENSG00000196642				37	0	0	24	4	14.2857
MAMDC4	0	genome.wustl.edu	37	9	139748023	139748023	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	139748023	139748023	C	T	SNP	MAMDC4	ENST00000445819	human	ensembl	74_37	+1	known	nonsense	c.355	p.R119*	0.344	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	MAMDC4	HGNC	ENSG00000177943				105	0	0	66	21	24.1379
TRAF2	0	genome.wustl.edu	37	9	139814907	139814907	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	139814907	139814907	C	A	SNP	TRAF2	ENST00000359662	human	ensembl	74_37	+1	known	silent	c.1056	p.A352	0.012	pirsf_TNF_rcpt--assoc_TRAF	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF2	HGNC	ENSG00000127191				40	0	0	29	12	29.2683
C9orf139	0	genome.wustl.edu	37	9	139929124	139929124	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	139929124	139929124	G	A	SNP	C9orf139	ENST00000314330	human	ensembl	74_37	+1	known	missense	c.191	p.R64K	0.965	NULL	NULL	-	no_errors	C9orf139	HGNC	ENSG00000180539				94	0	0	81	20	19.802
SLC34A3	0	genome.wustl.edu	37	9	140130434	140130434	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	140130434	140130434	G	A	SNP	SLC34A3	ENST00000361134	human	ensembl	74_37	+1	known	missense	c.1366	p.A456T	0.129	pfam_Na/Pi_transpt,tigrfam_Na/Pi_transpt	pfam_Na/Pi_transpt,tigrfam_Na/Pi_transpt	-	no_errors	SLC34A3	HGNC	ENSG00000198569				98	0	0	71	18	20.2247
SLC34A3	0	genome.wustl.edu	37	9	140130512	140130512	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	140130512	140130512	G	A	SNP	SLC34A3	ENST00000361134	human	ensembl	74_37	+1	known	missense	c.1444	p.A482T	0.998	tigrfam_Na/Pi_transpt	pfam_Na/Pi_transpt,tigrfam_Na/Pi_transpt	-	no_errors	SLC34A3	HGNC	ENSG00000198569				60	0	0	53	13	19.697
C9orf173	0	genome.wustl.edu	37	9	140147666	140147666	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	140147666	140147666	G	A	SNP	C9orf173	ENST00000412566	human	ensembl	74_37	+1	known	missense	c.896	p.R299H	0.806	NULL	NULL	-	no_errors	C9orf173	HGNC	ENSG00000197768				16	0	0	8	4	33.3333
ARRDC1	0	genome.wustl.edu	37	9	140508392	140508392	+	RNA	SNP	C	C	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	140508392	140508392	C	G	SNP	ARRDC1	ENST00000466367	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ARRDC1	HGNC	ENSG00000197070				40	0	0	31	6	16.2162
ZDHHC21	0	genome.wustl.edu	37	9	14674299	14674299	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	14674299	14674299	A	G	SNP	ZDHHC21	ENST00000380916	human	ensembl	74_37	-1	known	missense	c.40	p.W14R	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC21	HGNC	ENSG00000175893				194	0	0	112	38	25.3333
CNTLN	0	genome.wustl.edu	37	9	17484293	17484293	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	17484293	17484293	G	A	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	missense	c.3856	p.A1286T	1.000	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459				209	0	0	165	42	20.2899
HAUS6	0	genome.wustl.edu	37	9	19058515	19058515	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	19058515	19058515	T	G	SNP	HAUS6	ENST00000380502	human	ensembl	74_37	-1	known	missense	c.2250	p.K750N	0.197	NULL	NULL	-	no_errors	HAUS6	HGNC	ENSG00000147874				51	0	0	60	8	11.7647
SMARCA2	0	genome.wustl.edu	37	9	2104016	2104016	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	2104016	2104016	C	T	SNP	SMARCA2	ENST00000349721	human	ensembl	74_37	+1	known	missense	c.3139	p.R1047W	1.000	superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,superfamily_RNaseH-like_dom,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	SMARCA2	HGNC	ENSG00000080503				316	0	0	224	60	21.1268
CDKN2A	0	genome.wustl.edu	37	9	21974573	21974573	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	21974573	21974573	T	C	SNP	CDKN2A	ENST00000380151	human	ensembl	74_37	-1	known	missense	c.254	p.K85R	0.000	NULL	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2A	HGNC	ENSG00000147889				403	0	0	296	95	24.2967
KIAA0020	0	genome.wustl.edu	37	9	2820070	2820070	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	2820070	2820070	G	A	SNP	KIAA0020	ENST00000397885	human	ensembl	74_37	-1	known	missense	c.1217	p.A406V	1.000	superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	pfam_CPL,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	KIAA0020	HGNC	ENSG00000080608				95	0	0	72	19	20.8791
KIAA0020	0	genome.wustl.edu	37	9	2831004	2831004	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	2831004	2831004	G	A	SNP	KIAA0020	ENST00000397885	human	ensembl	74_37	-1	known	missense	c.635	p.A212V	1.000	superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	pfam_CPL,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	KIAA0020	HGNC	ENSG00000080608				43	0	0	26	13	33.3333
B4GALT1	0	genome.wustl.edu	37	9	33167076	33167076	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	33167076	33167076	G	A	SNP	B4GALT1	ENST00000379731	human	ensembl	74_37	-1	known	missense	c.92	p.A31V	0.992	NULL	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT1	HGNC	ENSG00000086062				17	0	0	13	5	27.7778
NOL6	0	genome.wustl.edu	37	9	33462740	33462740	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	33462740	33462740	T	C	SNP	NOL6	ENST00000297990	human	ensembl	74_37	-1	known	silent	c.3363	p.A1121	0.912	pfam_Nrap	pfam_Nrap	-	no_errors	NOL6	HGNC	ENSG00000165271				105	0	0	70	25	26.3158
KIF24	0	genome.wustl.edu	37	9	34311229	34311229	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	34311229	34311229	T	C	SNP	KIF24	ENST00000379166	human	ensembl	74_37	-1	known	missense	c.116	p.D39G	1.000	pfam_SAM_type1,superfamily_SAM/pointed,pfscan_SAM	pfam_Kinesin_motor_dom,pfam_SAM_type1,superfamily_P-loop_NTPase,superfamily_SAM/pointed,smart_Kinesin_motor_dom,pfscan_SAM,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF24	HGNC	ENSG00000186638				62	0	0	39	16	29.0909
VCP	0	genome.wustl.edu	37	9	35067913	35067913	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	35067913	35067913	G	A	SNP	VCP	ENST00000358901	human	ensembl	74_37	-1	known	missense	c.277	p.R93C	1.000	pfam_CDC4_N-term_subdom,superfamily_Asp_de-COase-like_dom,tigrfam_AAA_ATPase_CDC48	pfam_ATPase_AAA_core,pfam_CDC4_N-term_subdom,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Cdc48_dom2,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_Vps4_C,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	-	no_errors	VCP	HGNC	ENSG00000165280				107	0	0	74	4	5.12821
UNC13B	0	genome.wustl.edu	37	9	35403768	35403768	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	35403768	35403768	C	A	SNP	UNC13B	ENST00000378496	human	ensembl	74_37	+1	known	missense	c.4571	p.P1524H	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13B	HGNC	ENSG00000198722				77	0	0	53	20	27.3973
RUSC2	0	genome.wustl.edu	37	9	35555607	35555607	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	35555607	35555607	G	A	SNP	RUSC2	ENST00000361226	human	ensembl	74_37	+1	known	silent	c.2565	p.P855	0.952	NULL	pfam_Run,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC2	HGNC	ENSG00000198853				63	0	0	47	18	27.6923
FAM166B	0	genome.wustl.edu	37	9	35563290	35563290	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	35563290	35563290	C	T	SNP	FAM166B	ENST00000447837	human	ensembl	74_37	-1	known	nonsense	c.159	p.W53*	1.000	pfam_UPF0573/UPF0605	pfam_UPF0573/UPF0605	-	no_errors	FAM166B	HGNC	ENSG00000215187				117	0	0	79	31	28.1818
TESK1	0	genome.wustl.edu	37	9	35609368	35609368	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	35609368	35609368	C	T	SNP	TESK1	ENST00000336395	human	ensembl	74_37	+1	known	nonsense	c.1510	p.Q504*	0.877	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK1	HGNC	ENSG00000107140				84	0	0	51	9	15
GRHPR	0	genome.wustl.edu	37	9	37428512	37428512	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	37428512	37428512	C	T	SNP	GRHPR	ENST00000318158	human	ensembl	74_37	+1	known	silent	c.436	p.L146	0.994	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,pfam_6PGDH_NADP-bd	-	no_errors	GRHPR	HGNC	ENSG00000137106				168	0	0	95	34	26.3566
FRMPD1	0	genome.wustl.edu	37	9	37746591	37746591	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	37746591	37746591	C	T	SNP	FRMPD1	ENST00000377765	human	ensembl	74_37	+1	known	missense	c.4562	p.A1521V	0.013	NULL	pfam_FERM_central,pfam_PDZ,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD1	HGNC	ENSG00000070601				141	0	0	76	33	30.2752
JAK2	0	genome.wustl.edu	37	9	5089751	5089751	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	5089751	5089751	G	A	SNP	JAK2	ENST00000381652	human	ensembl	74_37	+1	known	silent	c.2649	p.K883	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak2,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK2	HGNC	ENSG00000096968				145	0	0	98	38	27.9412
KDM4C	0	genome.wustl.edu	37	9	6805770	6805770	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	6805770	6805770	G	A	SNP	KDM4C	ENST00000381309	human	ensembl	74_37	+1	known	missense	c.316	p.G106S	1.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077				91	0	0	77	32	29.3578
KDM4C	0	genome.wustl.edu	37	9	6814672	6814672	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	6814672	6814672	G	A	SNP	KDM4C	ENST00000381309	human	ensembl	74_37	+1	known	missense	c.362	p.R121H	1.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077				188	0	0	140	38	21.3483
PRKACG	0	genome.wustl.edu	37	9	71628327	71628327	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	71628327	71628327	G	A	SNP	PRKACG	ENST00000377276	human	ensembl	74_37	-1	known	missense	c.682	p.L228F	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACG	HGNC	ENSG00000165059				75	0	0	57	13	18.5714
TMEM2	0	genome.wustl.edu	37	9	74329881	74329881	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	74329881	74329881	C	A	SNP	TMEM2	ENST00000377044	human	ensembl	74_37	-1	known	missense	c.2560	p.D854Y	1.000	superfamily_Pectin_lyase_fold/virulence	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	TMEM2	HGNC	ENSG00000135048				195	0	0	132	27	16.9811
ALDH1A1	0	genome.wustl.edu	37	9	75539031	75539031	+	Silent	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	75539031	75539031	T	G	SNP	ALDH1A1	ENST00000297785	human	ensembl	74_37	-1	known	silent	c.651	p.G217	0.995	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A1	HGNC	ENSG00000165092				165	0	0	133	41	23.5632
VPS13A	0	genome.wustl.edu	37	9	79952237	79952237	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	79952237	79952237	G	C	SNP	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	missense	c.6162	p.E2054D	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				106	0	0	53	24	31.1688
SHC3	0	genome.wustl.edu	37	9	91657048	91657048	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	91657048	91657048	G	A	SNP	SHC3	ENST00000375835	human	ensembl	74_37	-1	known	missense	c.1253	p.T418M	0.000	NULL	pfam_PTB/PI_dom,pfam_SH2,smart_PTB/PI_dom,smart_SH2,pfscan_PTB/PI_dom,pfscan_SH2,prints_PID_Shc-like,prints_SH2	-	no_errors	SHC3	HGNC	ENSG00000148082				158	0	0	106	39	26.8966
SEMA4D	0	genome.wustl.edu	37	9	91994251	91994251	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	91994251	91994251	C	T	SNP	SEMA4D	ENST00000356444	human	ensembl	74_37	-1	known	missense	c.1957	p.V653I	0.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,pfam_Immunoglobulin,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4D	HGNC	ENSG00000187764				390	1	0.255754	270	75	21.7391
ROR2	0	genome.wustl.edu	37	9	94495680	94495680	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	94495680	94495680	C	A	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	missense	c.661	p.D221Y	1.000	pirsf_Tyr_kinase_rcpt_ROR,pfam_Frizzled_dom,superfamily_Frizzled_dom,pfscan_Frizzled_dom	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR2	HGNC	ENSG00000169071				26	0	0	17	5	22.7273
BICD2	0	genome.wustl.edu	37	9	95481241	95481241	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	95481241	95481241	G	A	SNP	BICD2	ENST00000356884	human	ensembl	74_37	-1	known	silent	c.1686	p.G562	0.000	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc	-	no_errors	BICD2	HGNC	ENSG00000185963				37	0	0	21	6	22.2222
BICD2	0	genome.wustl.edu	37	9	95481833	95481833	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	95481833	95481833	G	A	SNP	BICD2	ENST00000356884	human	ensembl	74_37	-1	known	missense	c.1094	p.T365M	0.452	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc	-	no_errors	BICD2	HGNC	ENSG00000185963				14	0	0	16	5	23.8095
FAM120A	0	genome.wustl.edu	37	9	96261170	96261170	+	Splice_Site	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	96261170	96261170	T	C	SNP	FAM120A	ENST00000333936	human	ensembl	74_37	+1	known	splice_site	c.1030+2	e5+2	1.000	-	-	-	no_errors	FAM120A	HGNC	ENSG00000048828				297	0	0	249	57	18.6275
PHF2	0	genome.wustl.edu	37	9	96438043	96438043	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	96438043	96438043	C	T	SNP	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	missense	c.2804	p.A935V	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				88	0	0	56	18	24.3243
PTCH1	0	genome.wustl.edu	37	9	98268780	98268780	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	98268780	98268780	G	A	SNP	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	silent	c.303	p.F101	1.000	tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920				52	0	0	43	15	25.8621
CDC14B	0	genome.wustl.edu	37	9	99285991	99285991	+	Silent	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	99285991	99285991	C	A	SNP	CDC14B	ENST00000375241	human	ensembl	74_37	-1	known	silent	c.963	p.T321	0.271	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	CDC14B	HGNC	ENSG00000081377				75	0	0	35	16	31.3725
CSTF2	0	genome.wustl.edu	37	X	100088274	100088274	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	100088274	100088274	G	A	SNP	CSTF2	ENST00000415585	human	ensembl	74_37	+1	known	missense	c.1373	p.R458H	0.061	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CSTF2	HGNC	ENSG00000101811				13	0	0	10	11	52.381
TRMT2B	0	genome.wustl.edu	37	X	100292967	100292967	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	100292967	100292967	A	G	SNP	TRMT2B	ENST00000372935	human	ensembl	74_37	-1	known	missense	c.377	p.V126A	0.000	NULL	pfam_U5_MeTrfase,pfam_Small_mtfrase_dom	-	no_errors	TRMT2B	HGNC	ENSG00000188917				310	0	0	168	132	44
ARMCX5	0	genome.wustl.edu	37	X	101857120	101857120	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	101857120	101857120	C	T	SNP	ARMCX5	ENST00000246174	human	ensembl	74_37	+1	known	silent	c.51	p.G17	0.001	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	ARMCX5	HGNC	ENSG00000125962				46	0	0	16	11	40.7407
GPRASP1	0	genome.wustl.edu	37	X	101909665	101909665	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	101909665	101909665	C	A	SNP	GPRASP1	ENST00000361600	human	ensembl	74_37	+1	known	missense	c.824	p.P275H	0.317	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP1	HGNC	ENSG00000198932				162	0	0	162	16	8.98876
TCEAL5	0	genome.wustl.edu	37	X	102529176	102529176	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	102529176	102529176	G	A	SNP	TCEAL5	ENST00000372680	human	ensembl	74_37	-1	known	missense	c.316	p.R106C	0.527	pfam_TF_A-like/BEX-like	pfam_TF_A-like/BEX-like	-	no_errors	TCEAL5	HGNC	ENSG00000204065				122	0	0	54	50	48.0769
BEX2	0	genome.wustl.edu	37	X	102564733	102564733	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	102564733	102564733	C	T	SNP	BEX2	ENST00000536889	human	ensembl	74_37	-1	known	missense	c.268	p.V90I	0.034	pfam_TF_A-like/BEX-like	pfam_TF_A-like/BEX-like	-	no_errors	BEX2	HGNC	ENSG00000133134				132	0	0	79	63	44.3662
TBC1D8B	0	genome.wustl.edu	37	X	106083331	106083331	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	106083331	106083331	A	G	SNP	TBC1D8B	ENST00000357242	human	ensembl	74_37	+1	known	silent	c.1407	p.G469	0.099	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8B	HGNC	ENSG00000133138				125	0	0	65	68	51.1278
RBM41	0	genome.wustl.edu	37	X	106358698	106358698	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	106358698	106358698	C	T	SNP	RBM41	ENST00000372479	human	ensembl	74_37	-1	known	missense	c.407	p.C136Y	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM41	HGNC	ENSG00000089682				80	0	0	37	35	48.6111
TSC22D3	0	genome.wustl.edu	37	X	106957913	106957913	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	106957913	106957913	G	A	SNP	TSC22D3	ENST00000315660	human	ensembl	74_37	-1	known	nonsense	c.439	p.R147*	1.000	pfam_TSC-22_Dip_Bun	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D3	HGNC	ENSG00000157514				168	0	0	80	77	49.0446
KCNE1L	0	genome.wustl.edu	37	X	108868075	108868075	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	108868075	108868075	C	T	SNP	KCNE1L	ENST00000372101	human	ensembl	74_37	-1	known	missense	c.175	p.A59T	0.997	NULL	NULL	-	no_errors	KCNE1L	HGNC	ENSG00000176076				46	0	0	24	11	31.4286
HCCS	0	genome.wustl.edu	37	X	11133052	11133052	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	11133052	11133052	T	C	SNP	HCCS	ENST00000321143	human	ensembl	74_37	+1	known	silent	c.198	p.C66	0.998	pfam_Cyt_C/C1_haem_lyase	pfam_Cyt_C/C1_haem_lyase	-	no_errors	HCCS	HGNC	ENSG00000004961				124	0	0	47	41	46.5909
LUZP4	0	genome.wustl.edu	37	X	114540853	114540853	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	114540853	114540853	T	A	SNP	LUZP4	ENST00000371920	human	ensembl	74_37	+1	known	missense	c.426	p.N142K	0.001	NULL	NULL	-	no_errors	LUZP4	HGNC	ENSG00000102021				79	0	0	38	40	51.2821
KLHL13	0	genome.wustl.edu	37	X	117043783	117043783	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	117043783	117043783	G	A	SNP	KLHL13	ENST00000539496	human	ensembl	74_37	-1	known	nonsense	c.856	p.R286*	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL13	HGNC	ENSG00000003096				144	0	0	54	47	46.5347
SLC25A43	0	genome.wustl.edu	37	X	118587102	118587102	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	118587102	118587102	C	T	SNP	SLC25A43	ENST00000488158	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC25A43	HGNC	ENSG00000077713				16	0	0	11	7	38.8889
DCAF12L2	0	genome.wustl.edu	37	X	125299494	125299494	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	125299494	125299494	G	A	SNP	DCAF12L2	ENST00000360028	human	ensembl	74_37	-1	known	silent	c.414	p.D138	0.871	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L2	HGNC	ENSG00000198354				68	0	0	34	33	49.2537
HS6ST2	0	genome.wustl.edu	37	X	132091108	132091108	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	132091108	132091108	G	A	SNP	HS6ST2	ENST00000521489	human	ensembl	74_37	-1	known	silent	c.675	p.G225	1.000	pfam_Sulfotransferase,superfamily_P-loop_NTPase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST2	HGNC	ENSG00000171004				24	0	0	14	10	41.6667
RBMX	0	genome.wustl.edu	37	X	135956553	135956553	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	135956553	135956553	A	T	SNP	RBMX	ENST00000320676	human	ensembl	74_37	-1	known	missense	c.924	p.S308R	1.000	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMX	HGNC	ENSG00000147274				133	0	0	79	49	38.2812
FGF13	0	genome.wustl.edu	37	X	137717759	137717759	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	137717759	137717759	T	C	SNP	FGF13	ENST00000370603	human	ensembl	74_37	-1	known	missense	c.490	p.T164A	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam,prints_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam,prints_Fibroblast_GF_fam	-	no_errors	FGF13	HGNC	ENSG00000129682				110	0	0	63	45	41.6667
GEMIN8	0	genome.wustl.edu	37	X	14027102	14027102	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	14027102	14027102	T	C	SNP	GEMIN8	ENST00000380523	human	ensembl	74_37	-1	known	missense	c.659	p.Q220R	1.000	NULL	NULL	-	no_errors	GEMIN8	HGNC	ENSG00000046647				109	0	0	106	6	5.35714
FMR1	0	genome.wustl.edu	37	X	147019098	147019098	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	147019098	147019098	T	C	SNP	FMR1	ENST00000370475	human	ensembl	74_37	+1	known	silent	c.1104	p.P368	0.996	smart_KH_dom	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FMR1	HGNC	ENSG00000102081				142	0	0	78	51	39.5349
IL3RA	0	genome.wustl.edu	37	X	1499988	1499988	+	Silent	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	1499988	1499988	C	T	SNP	IL3RA	ENST00000331035	human	ensembl	74_37	+1	known	silent	c.1053	p.N351	0.000	NULL	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	IL3RA	HGNC	ENSG00000185291				343	0	0	215	71	24.8252
PRRG3	0	genome.wustl.edu	37	X	150869231	150869231	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	150869231	150869231	G	A	SNP	PRRG3	ENST00000370353	human	ensembl	74_37	+1	known	missense	c.422	p.S141N	0.587	NULL	pfam_GLA_domain,superfamily_GLA_domain,smart_GLA_domain,pfscan_GLA_domain,prints_GLA_domain	-	no_errors	PRRG3	HGNC	ENSG00000130032				60	0	0	38	32	45.7143
ZNF185	0	genome.wustl.edu	37	X	152135749	152135749	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	152135749	152135749	A	C	SNP	ZNF185	ENST00000370270	human	ensembl	74_37	+1	known	missense	c.1931	p.K644T	0.124	NULL	smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	ZNF185	HGNC	ENSG00000147394				74	0	0	26	25	49.0196
ASMTL-AS1	0	genome.wustl.edu	37	X	1522430	1522430	+	RNA	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	1522430	1522430	T	G	SNP	ASMTL-AS1	ENST00000419737	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	ASMTL-AS1	HGNC	ENSG00000236017				49	0	0	44	9	16.9811
RENBP	0	genome.wustl.edu	37	X	153209078	153209078	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	153209078	153209078	G	A	SNP	RENBP	ENST00000393700	human	ensembl	74_37	-1	known	nonsense	c.382	p.Q128*	1.000	pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like	pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like	-	no_errors	RENBP	HGNC	ENSG00000102032				62	0	0	48	12	20
HCFC1	0	genome.wustl.edu	37	X	153218045	153218045	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	153218045	153218045	G	T	SNP	HCFC1	ENST00000310441	human	ensembl	74_37	-1	known	missense	c.4862	p.A1621D	0.997	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534				22	0	0	9	7	43.75
FLNA	0	genome.wustl.edu	37	X	153591075	153591075	+	Silent	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	153591075	153591075	G	A	SNP	FLNA	ENST00000369850	human	ensembl	74_37	-1	known	silent	c.2358	p.A786	0.018	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924				23	0	0	9	12	57.1429
MBTPS2	0	genome.wustl.edu	37	X	21896785	21896785	+	Silent	SNP	A	A	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	21896785	21896785	A	G	SNP	MBTPS2	ENST00000379484	human	ensembl	74_37	+1	known	silent	c.1236	p.G412	0.997	pfam_Peptidase_M50	pfam_Peptidase_M50,superfamily_PDZ,prints_MBTPS2	-	no_errors	MBTPS2	HGNC	ENSG00000012174				157	0	0	96	79	45.1429
POLA1	0	genome.wustl.edu	37	X	24760164	24760164	+	Silent	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	24760164	24760164	T	C	SNP	POLA1	ENST00000379068	human	ensembl	74_37	+1	known	silent	c.2392	p.L798	1.000	pfam_DNA-dir_DNA_pol_B_multi_dom,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_Znf_DNA-dir_DNA_pol_B_alpha,pfam_DNA_pol_a_cat_su_N,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	-	no_errors	POLA1	HGNC	ENSG00000101868				112	0	0	46	51	52.5773
MXRA5	0	genome.wustl.edu	37	X	3228890	3228890	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	3228890	3228890	C	T	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	missense	c.7354	p.V2452M	0.146	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825				34	0	0	20	18	47.3684
OTC	0	genome.wustl.edu	37	X	38271179	38271179	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	38271179	38271179	T	G	SNP	OTC	ENST00000039007	human	ensembl	74_37	+1	known	missense	c.932	p.V311G	1.000	pfam_Asp_carbamoyltransf_Asp/Orn-bd,superfamily_Asp/Orn_carbamoylTrfase,prints_Asp/Orn_carbamoylTrfase,tigrfam_Orn/put_carbamltrans	pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_Asp/Orn_carbamoyltranf_P-bd,superfamily_Asp/Orn_carbamoylTrfase,prints_Orn/put_carbamltrans,prints_Asp/Orn_carbamoylTrfase,prints_Asp_carbamoyltransf,tigrfam_Orn/put_carbamltrans	-	no_errors	OTC	HGNC	ENSG00000036473				139	1	0.714286	61	72	54.1353
CXorf38	0	genome.wustl.edu	37	X	40496296	40496296	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	40496296	40496296	A	T	SNP	CXorf38	ENST00000327877	human	ensembl	74_37	-1	known	missense	c.584	p.I195N	0.994	NULL	NULL	-	no_errors	CXorf38	HGNC	ENSG00000185753				107	0	0	54	39	41.9355
RBM10	0	genome.wustl.edu	37	X	47044527	47044527	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	47044527	47044527	C	A	SNP	RBM10	ENST00000377604	human	ensembl	74_37	+1	known	missense	c.2024	p.P675H	1.000	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM10	HGNC	ENSG00000182872				49	0	0	32	28	46.6667
CCNB3	0	genome.wustl.edu	37	X	50053307	50053307	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	50053307	50053307	T	C	SNP	CCNB3	ENST00000276014	human	ensembl	74_37	+1	known	missense	c.2138	p.L713S	0.002	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082				37	0	0	18	16	47.0588
CCNB3	0	genome.wustl.edu	37	X	50054263	50054263	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	50054263	50054263	G	A	SNP	CCNB3	ENST00000276014	human	ensembl	74_37	+1	known	missense	c.3094	p.A1032T	0.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082				111	0	0	63	53	45.6897
DGKK	0	genome.wustl.edu	37	X	50130583	50130583	+	RNA	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	50130583	50130583	T	C	SNP	DGKK	ENST00000376025	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DGKK	HGNC	ENSG00000204466				41	0	0	15	23	60.5263
ENSG00000232593	0	genome.wustl.edu	37	X	53172598	53172598	+	RNA	SNP	G	G	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	53172598	53172598	G	C	SNP	ENSG00000232593	ENST00000604849	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-258C19.5	Clone_based_vega_gene	ENSG00000232593				19	0	0	4	14	77.7778
HUWE1	0	genome.wustl.edu	37	X	53586338	53586338	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	53586338	53586338	T	C	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.7892	p.Q2631R	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758				74	0	0	49	26	34.6667
SPIN2A	0	genome.wustl.edu	37	X	57162586	57162586	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	57162586	57162586	C	A	SNP	SPIN2A	ENST00000374906	human	ensembl	74_37	-1	known	missense	c.445	p.G149W	1.000	pfam_Spin_Ssty	pfam_Spin_Ssty	-	no_errors	SPIN2A	HGNC	ENSG00000147059				127	0	0	71	50	41.3223
HEPH	0	genome.wustl.edu	37	X	65413405	65413405	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	65413405	65413405	C	T	SNP	HEPH	ENST00000519389	human	ensembl	74_37	+1	known	nonsense	c.1456	p.R486*	0.086	superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPH	HGNC	ENSG00000089472				67	0	0	24	21	46.6667
NHSL2	0	genome.wustl.edu	37	X	71359790	71359790	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	71359790	71359790	C	T	SNP	NHSL2	ENST00000540800	human	ensembl	74_37	+1	known	missense	c.2392	p.R798W	1.000	NULL	NULL	-	no_errors	NHSL2	HGNC	ENSG00000204131				20	0	0	15	15	50
XIST	0	genome.wustl.edu	37	X	73040758	73040758	+	RNA	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	73040758	73040758	C	T	SNP	XIST	ENST00000416330	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				71	0	0	51	37	42.0455
NAP1L3	0	genome.wustl.edu	37	X	92927070	92927070	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	92927070	92927070	C	T	SNP	NAP1L3	ENST00000373079	human	ensembl	74_37	-1	known	missense	c.1234	p.V412I	1.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	NAP1L3	HGNC	ENSG00000186310				24	0	0	14	8	36.3636
EIF1AY	0	genome.wustl.edu	37	Y	22741514	22741514	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	Y	22741514	22741514	C	T	SNP	EIF1AY	ENST00000361365	human	ensembl	74_37	+1	known	missense	c.37	p.R13C	1.000	superfamily_NA-bd_OB-fold	pfam_RNA-binding_domain_S1_IF1,superfamily_NA-bd_OB-fold,smart_TIF_eIF-1A,pfscan_RNA-binding_domain_S1_IF1,tigrfam_TIF_eIF-1A	-	no_errors	EIF1AY	HGNC	ENSG00000198692				13	0	0	5	3	37.5
COL11A1	0	genome.wustl.edu	37	1	103474067	103474067	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	103474067	103474067	C	-	DEL	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	frame_shift_del	c.1671	p.P558fs	0.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				112	0	0	81	17	17.3469
KIF1B	0	genome.wustl.edu	37	1	10425169	10425171	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	10425169	10425171	AGG	-	DEL	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	in_frame_del	c.4240_4242	p.R1416in_frame_del	1.000:1.000:1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				103	0	0	67	12	15.1899
AKNAD1	0	genome.wustl.edu	37	1	109377583	109377583	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	109377583	109377583	G	-	DEL	AKNAD1	ENST00000370001	human	ensembl	74_37	-1	known	frame_shift_del	c.1632	p.N545fs	0.026	NULL	pfam_TF_AT-hook	-	no_errors	AKNAD1	HGNC	ENSG00000162641				136	0	0	84	22	20.7547
AMPD2	0	genome.wustl.edu	37	1	110167985	110167985	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	110167985	110167985	C	-	DEL	AMPD2	ENST00000256578	human	ensembl	74_37	+1	known	frame_shift_del	c.314	p.C107fs	1.000	pirsf_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD2	HGNC	ENSG00000116337				52	0	0	48	10	17.2414
BCAS2	0	genome.wustl.edu	37	1	115118337	115118337	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	115118337	115118337	T	-	DEL	BCAS2	ENST00000369541	human	ensembl	74_37	-1	known	frame_shift_del	c.293	p.N98fs	1.000	pfam_SPF27	pfam_SPF27	-	no_errors	BCAS2	HGNC	ENSG00000116752				170	0	0	121	30	19.8675
SYCP1	0	genome.wustl.edu	37	1	115430252	115430252	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	115430252	115430252	A	-	DEL	SYCP1	ENST00000369518	human	ensembl	74_37	+1	known	frame_shift_del	c.1196	p.N401fs	0.995	pfam_SCP-1	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765				54	0	0	41	8	16.3265
ANKRD34A	0	genome.wustl.edu	37	1	145474257	145474258	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	145474257	145474258	CT	-	DEL	ANKRD34A	ENST00000323397	human	ensembl	74_37	+1	known	frame_shift_del	c.929_930	p.R313fs	0.640:0.375	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34A	HGNC	ENSG00000181039				54	0	0	53	5	8.62069
TNR	0	genome.wustl.edu	37	1	175334334	175334334	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	175334334	175334334	G	-	DEL	TNR	ENST00000263525	human	ensembl	74_37	-1	known	frame_shift_del	c.2399	p.P800fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147				71	0	0	61	14	18.6667
TDRD5	0	genome.wustl.edu	37	1	179599927	179599928	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	179599927	179599928	-	A	INS	TDRD5	ENST00000444136	human	ensembl	74_37	+1	known	frame_shift_ins	c.998_999	p.L336fs	0.980:0.932	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD5	HGNC	ENSG00000162782				154	0	0	129	38	22.7545
RGL1	0	genome.wustl.edu	37	1	183881395	183881395	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	183881395	183881395	A	-	DEL	RGL1	ENST00000304685	human	ensembl	74_37	+1	known	frame_shift_del	c.1847	p.K618fs	0.999	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL1	HGNC	ENSG00000143344				96	0	0	40	11	21.5686
SWT1	0	genome.wustl.edu	37	1	185153933	185153936	+	Frame_Shift_Del	DEL	GAAG	GAAG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GAAG	GAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	185153933	185153936	GAAG	-	DEL	SWT1	ENST00000367500	human	ensembl	74_37	+1	known	frame_shift_del	c.1299_1302	p.G436fs	1.000:1.000:0.999:0.970	smart_PIN_dom	smart_PIN_dom	-	no_errors	SWT1	HGNC	ENSG00000116668				191	0	0	173	22	11.2821
ZBTB41	0	genome.wustl.edu	37	1	197145703	197145703	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	197145703	197145703	T	-	DEL	ZBTB41	ENST00000367405	human	ensembl	74_37	-1	known	frame_shift_del	c.1870	p.I624fs	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB41	HGNC	ENSG00000177888				256	0	0	193	40	17.1674
UBE2T	0	genome.wustl.edu	37	1	202304853	202304854	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	202304853	202304854	CT	-	DEL	UBE2T	ENST00000367274	human	ensembl	74_37	-1	known	frame_shift_del	c.30_29	p.E10fs	1.000:1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2T	HGNC	ENSG00000077152				169	0	0	127	28	18.0645
GOLT1A	0	genome.wustl.edu	37	1	204170877	204170879	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	204170877	204170879	GAA	-	DEL	GOLT1A	ENST00000308302	human	ensembl	74_37	-1	known	in_frame_del	c.180_178	p.F60in_frame_del	1.000:1.000:1.000	pfam_Vesicle_transpt_Got1/SFT2	pfam_Vesicle_transpt_Got1/SFT2	-	no_errors	GOLT1A	HGNC	ENSG00000174567				146	0	0	107	19	15.0794
DYRK3	0	genome.wustl.edu	37	1	206821441	206821441	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	206821441	206821441	A	-	DEL	DYRK3	ENST00000367109	human	ensembl	74_37	+1	known	frame_shift_del	c.898	p.N302fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK3	HGNC	ENSG00000143479				273	0	0	239	50	17.301
CR1L	0	genome.wustl.edu	37	1	207850873	207850873	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	207850873	207850873	A	-	DEL	CR1L	ENST00000508064	human	ensembl	74_37	+1	known	frame_shift_del	c.237	p.N81fs	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1L	HGNC	ENSG00000197721				270	0	0	221	41	15.6489
RAB3GAP2	0	genome.wustl.edu	37	1	220363750	220363750	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	220363750	220363750	T	-	DEL	RAB3GAP2	ENST00000358951	human	ensembl	74_37	-1	known	frame_shift_del	c.1600	p.T534fs	1.000	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom	-	no_errors	RAB3GAP2	HGNC	ENSG00000118873				162	0	0	108	26	19.403
MIA3	0	genome.wustl.edu	37	1	222802793	222802793	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	222802793	222802793	A	-	DEL	MIA3	ENST00000344441	human	ensembl	74_37	+1	known	frame_shift_del	c.2231	p.N746fs	0.196	NULL	pfam_SH3_2,superfamily_SH3_domain	-	no_errors	MIA3	HGNC	ENSG00000154305				127	0	0	102	21	17.0732
EPHX1	0	genome.wustl.edu	37	1	226026384	226026384	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	226026384	226026384	C	-	DEL	EPHX1	ENST00000272167	human	ensembl	74_37	+1	known	frame_shift_del	c.394	p.Q134fs	1.000	pfam_Epoxide_hydro_N,pirsf_Epoxide_hydrolase	pfam_Epoxide_hydro_N,pfam_AB_hydrolase_1,pirsf_Epoxide_hydrolase,prints_Epox_hydrolase-like	-	no_errors	EPHX1	HGNC	ENSG00000143819				234	0	0	203	35	14.7059
TMEM63A	0	genome.wustl.edu	37	1	226034752	226034752	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	226034752	226034752	G	-	DEL	TMEM63A	ENST00000366835	human	ensembl	74_37	-1	known	frame_shift_del	c.2413	p.Q805fs	0.750	NULL	pfam_DUF221	-	no_errors	TMEM63A	HGNC	ENSG00000196187				66	0	0	54	11	16.9231
C1QA	0	genome.wustl.edu	37	1	22964234	22964234	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	22964234	22964234	G	-	DEL	C1QA	ENST00000374642	human	ensembl	74_37	+1	known	frame_shift_del	c.125	p.R44fs	0.196	NULL	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QA	HGNC	ENSG00000173372				14	0	0	9	5	35.7143
AGT	0	genome.wustl.edu	37	1	230839055	230839055	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	230839055	230839055	A	-	DEL	AGT	ENST00000366667	human	ensembl	74_37	-1	known	frame_shift_del	c.1290	p.F430fs	0.354	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom,prints_Angiotensinogen	-	no_errors	AGT	HGNC	ENSG00000135744				141	0	0	88	21	19.2661
ARID4B	0	genome.wustl.edu	37	1	235409788	235409788	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	235409788	235409788	A	-	DEL	ARID4B	ENST00000264183	human	ensembl	74_37	-1	known	frame_shift_del	c.393	p.F131fs	1.000	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4B	HGNC	ENSG00000054267				187	0	0	168	33	16.4179
TCEB3	0	genome.wustl.edu	37	1	24078404	24078404	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	24078404	24078404	A	-	DEL	TCEB3	ENST00000418390	human	ensembl	74_37	+1	known	frame_shift_del	c.1387	p.N465fs	0.998	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,pfscan_F-box_dom	-	no_errors	TCEB3	HGNC	ENSG00000011007				223	0	0	114	68	37.3626
MTFR1L	0	genome.wustl.edu	37	1	26156309	26156310	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	26156309	26156310	AG	-	DEL	MTFR1L	ENST00000374300	human	ensembl	74_37	+1	known	frame_shift_del	c.761_762	p.Q256fs	1.000:1.000	NULL	pfam_Mtfr1	-	no_errors	MTFR1L	HGNC	ENSG00000117640				79	0	0	41	9	18
WDTC1	0	genome.wustl.edu	37	1	27622887	27622888	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	27622887	27622888	-	G	INS	WDTC1	ENST00000319394	human	ensembl	74_37	+1	known	frame_shift_ins	c.944_945	p.E317fs	1.000:1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784				217	0	0	171	29	14.5
SNHG12	0	genome.wustl.edu	37	1	28905063	28905064	+	RNA	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	28905063	28905064	-	T	INS	SNHG12	ENST00000475441	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.044:0.061	-	-	-	no_errors	SNHG12	HGNC	ENSG00000197989				22	0	0	13	5	27.7778
PTPRU	0	genome.wustl.edu	37	1	29638197	29638197	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	29638197	29638197	G	-	DEL	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	frame_shift_del	c.3028	p.D1011fs	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656				194	0	0	176	18	9.27835
SERINC2	0	genome.wustl.edu	37	1	31902257	31902257	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	31902257	31902257	C	-	DEL	SERINC2	ENST00000373710	human	ensembl	74_37	+1	known	frame_shift_del	c.912	p.H306fs	1.000	pfam_TMS_TDE	pfam_TMS_TDE	-	no_errors	SERINC2	HGNC	ENSG00000168528				163	0	0	129	23	15.1316
HCRTR1	0	genome.wustl.edu	37	1	32084832	32084832	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	32084832	32084832	C	-	DEL	HCRTR1	ENST00000373706	human	ensembl	74_37	+1	known	frame_shift_del	c.39	p.P15fs	0.996	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Orexin_rcpt,prints_GPCR_Rhodpsn,prints_Orexin_rcpt_1,prints_NPY_rcpt	-	no_errors	HCRTR1	HGNC	ENSG00000121764				113	0	0	93	31	25
KIAA0319L	0	genome.wustl.edu	37	1	35919162	35919162	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	35919162	35919162	T	-	DEL	KIAA0319L	ENST00000325722	human	ensembl	74_37	-1	known	frame_shift_del	c.1909	p.T637fs	1.000	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319L	HGNC	ENSG00000142687				220	0	0	151	40	20.9424
HIVEP3	0	genome.wustl.edu	37	1	42048809	42048809	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	42048809	42048809	G	-	DEL	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	frame_shift_del	c.1660	p.H554fs	0.996	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				76	0	0	61	14	18.6667
DMBX1	0	genome.wustl.edu	37	1	46978015	46978016	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	46978015	46978016	GT	-	DEL	DMBX1	ENST00000371956	human	ensembl	74_37	+1	known	frame_shift_del	c.998_999	p.W335fs	0.997:0.904	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	DMBX1	HGNC	ENSG00000197587				64	0	0	55	9	14.0625
STIL	0	genome.wustl.edu	37	1	47746581	47746581	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	47746581	47746581	G	-	DEL	STIL	ENST00000371877	human	ensembl	74_37	-1	known	frame_shift_del	c.1549	p.H517fs	0.011	NULL	NULL	-	no_errors	STIL	HGNC	ENSG00000123473				284	0	0	230	51	18.1495
SGIP1	0	genome.wustl.edu	37	1	67160137	67160137	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	67160137	67160137	T	-	DEL	SGIP1	ENST00000371039	human	ensembl	74_37	+1	known	frame_shift_del	c.989	p.Y332fs	1.000	NULL	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC	ENSG00000118473				46	0	0	40	7	14.8936
RERE	0	genome.wustl.edu	37	1	8420610	8420610	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	8420610	8420610	G	-	DEL	RERE	ENST00000337907	human	ensembl	74_37	-1	known	frame_shift_del	c.2957	p.P986fs	0.962	pfam_Atrophin-like	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599				32	0	0	27	6	18.1818
CLCA4	0	genome.wustl.edu	37	1	87026013	87026013	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	87026013	87026013	A	-	DEL	CLCA4	ENST00000370563	human	ensembl	74_37	+1	known	frame_shift_del	c.420	p.K142fs	0.674	pfam_Cl_channel_Ca,tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,superfamily_Fibronectin_type3,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA4	HGNC	ENSG00000016602				132	0	0	106	24	18.4615
GBP6	0	genome.wustl.edu	37	1	89834232	89834233	+	In_Frame_Ins	INS	-	-	GGC			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	89834232	89834233	-	GGC	INS	GBP6	ENST00000370456	human	ensembl	74_37	+1	known	in_frame_ins	c.122_123	p.43in_frame_insA	1.000:1.000	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP6	HGNC	ENSG00000183347				140	0	0	118	20	14.4928
CCDC18	0	genome.wustl.edu	37	1	93667516	93667516	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	1	93667516	93667516	A	-	DEL	CCDC18	ENST00000557479	human	ensembl	74_37	+1	known	frame_shift_del	c.1120	p.V377fs	1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483				71	0	0	74	20	21.2766
PAX2	0	genome.wustl.edu	37	10	102587324	102587324	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	102587324	102587324	C	-	DEL	PAX2	ENST00000428433	human	ensembl	74_37	+1	known	frame_shift_del	c.1202	p.R403fs	1.000	pfam_Pax2_C	pfam_Paired_dom,pfam_Pax2_C,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX2	HGNC	ENSG00000075891				133	0	0	94	10	9.61538
LDB1	0	genome.wustl.edu	37	10	103870407	103870407	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	103870407	103870407	C	-	DEL	LDB1	ENST00000425280	human	ensembl	74_37	-1	known	frame_shift_del	c.404	p.G135fs	1.000	NULL	NULL	-	no_errors	LDB1	HGNC	ENSG00000198728				66	0	0	42	21	33.3333
ADD3	0	genome.wustl.edu	37	10	111893350	111893350	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	111893350	111893350	A	-	DEL	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	frame_shift_del	c.2095	p.K701fs	1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700				149	0	0	98	23	19.0083
TDRD1	0	genome.wustl.edu	37	10	115987018	115987018	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	115987018	115987018	A	-	DEL	TDRD1	ENST00000251864	human	ensembl	74_37	+1	known	frame_shift_del	c.3363	p.N1123fs	0.120	NULL	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627				259	0	0	164	42	20.3883
TDRD1	0	genome.wustl.edu	37	10	115987869	115987869	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	115987869	115987869	A	-	DEL	TDRD1	ENST00000251864	human	ensembl	74_37	+1	known	frame_shift_del	c.3523	p.K1176fs	1.000	NULL	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627				41	0	0	33	12	26.6667
GFRA1	0	genome.wustl.edu	37	10	117849274	117849274	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	117849274	117849274	A	-	DEL	GFRA1	ENST00000355422	human	ensembl	74_37	-1	known	frame_shift_del	c.1175	p.L392fs	1.000	pirsf_Glial_neurotroph_fac_rcpt_a1/2	pfam_GDNF/GAS1,smart_GDNF/GAS1,pirsf_Glial_neurotroph_fac_rcpt_a1/2,prints_GDNF_rcpt,prints_GDNF_rcpt_A1	-	no_errors	GFRA1	HGNC	ENSG00000151892				291	0	0	190	54	22.1311
RAB11FIP2	0	genome.wustl.edu	37	10	119798647	119798647	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	119798647	119798647	T	-	DEL	RAB11FIP2	ENST00000369199	human	ensembl	74_37	-1	known	frame_shift_del	c.1101	p.D368fs	1.000	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP2	HGNC	ENSG00000107560				407	0	0	277	61	18.0473
INPP5F	0	genome.wustl.edu	37	10	121587003	121587003	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	121587003	121587003	A	-	DEL	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	frame_shift_del	c.3110	p.T1039fs	0.748	NULL	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825				244	0	0	181	39	17.7273
TACC2	0	genome.wustl.edu	37	10	123970380	123970380	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	123970380	123970380	C	-	DEL	TACC2	ENST00000334433	human	ensembl	74_37	+1	known	frame_shift_del	c.6440	p.P2149fs	0.908	NULL	pfam_TACC	-	no_errors	TACC2	HGNC	ENSG00000138162				242	0	0	178	37	17.2093
BTBD16	0	genome.wustl.edu	37	10	124066813	124066813	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	124066813	124066813	T	-	DEL	BTBD16	ENST00000368994	human	ensembl	74_37	+1	known	frame_shift_del	c.904	p.F303fs	0.904	NULL	superfamily_BTB/POZ_fold	-	no_errors	BTBD16	HGNC	ENSG00000138152				212	0	0	150	46	23.4694
OPTN	0	genome.wustl.edu	37	10	13151192	13151192	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	13151192	13151192	C	-	DEL	OPTN	ENST00000263036	human	ensembl	74_37	+1	known	frame_shift_del	c.70	p.H26fs	1.000	NULL	pfam_NEMO_N	-	no_errors	OPTN	HGNC	ENSG00000123240				160	0	0	113	19	14.3939
NMT2	0	genome.wustl.edu	37	10	15161374	15161374	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	15161374	15161374	G	-	DEL	NMT2	ENST00000378165	human	ensembl	74_37	-1	known	frame_shift_del	c.1138	p.R380fs	0.978	pfam_MyristoylCoA_TrFase_C,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	pfam_MyristoylCoA_TrFase_C,pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	-	no_errors	NMT2	HGNC	ENSG00000152465				367	0	0	301	20	6.23053
KIAA1217	0	genome.wustl.edu	37	10	24832909	24832910	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	24832909	24832910	-	A	INS	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	frame_shift_ins	c.4710_4711	p.F1572fs	1.000:1.000	NULL	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549				169	0	0	115	21	15.4412
ARHGAP12	0	genome.wustl.edu	37	10	32120692	32120692	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	32120692	32120692	T	-	DEL	ARHGAP12	ENST00000344936	human	ensembl	74_37	-1	known	frame_shift_del	c.1423	p.I475fs	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_dom,smart_SH3_domain,smart_WW_dom,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP12	HGNC	ENSG00000165322				96	0	0	72	18	20
ASAH2	0	genome.wustl.edu	37	10	52005194	52005194	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	52005194	52005194	A	-	DEL	ASAH2	ENST00000395526	human	ensembl	74_37	-1	known	frame_shift_del	c.148	p.S50fs	0.000	NULL	pfam_Ceramidase_alk	-	no_errors	ASAH2	HGNC	ENSG00000188611				75	0	0	45	15	25
SGMS1	0	genome.wustl.edu	37	10	52103731	52103731	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	52103731	52103731	G	-	DEL	SGMS1	ENST00000361781	human	ensembl	74_37	-1	known	frame_shift_del	c.144	p.L49fs	0.000	superfamily_SAM/pointed,pfscan_SAM	pfam_P_Acid_Pase_2/haloperoxidase,pfam_SAM_type1,superfamily_SAM/pointed,superfamily_P_Acid_Pase_2/haloperoxidase,pfscan_SAM	-	no_errors	SGMS1	HGNC	ENSG00000198964				145	0	0	117	17	12.6866
MBL2	0	genome.wustl.edu	37	10	54530516	54530516	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	54530516	54530516	G	-	DEL	MBL2	ENST00000373968	human	ensembl	74_37	-1	known	frame_shift_del	c.218	p.P73fs	1.000	pfam_Collagen	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	MBL2	HGNC	ENSG00000165471				253	0	0	153	49	24.2574
ANK3	0	genome.wustl.edu	37	10	61819650	61819651	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	61819650	61819651	-	G	INS	ANK3	ENST00000355288	human	ensembl	74_37	-1	known	frame_shift_ins	c.2273_2272	p.L758fs	1.000:0.992	NULL	pfam_ZU5,pfam_Death_domain,superfamily_DEATH-like_dom,smart_ZU5,smart_Death_domain,pfscan_Death_domain,pfscan_ZU5	-	no_errors	ANK3	HGNC	ENSG00000151150				292	0	0	190	52	21.4876
ANK3	0	genome.wustl.edu	37	10	62149221	62149221	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	62149221	62149221	T	-	DEL	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	frame_shift_del	c.76	p.R26fs	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				301	0	0	266	21	7.31707
PLAU	0	genome.wustl.edu	37	10	75673438	75673438	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	75673438	75673438	G	-	DEL	PLAU	ENST00000372764	human	ensembl	74_37	+1	known	frame_shift_del	c.602	p.G203fs	0.201	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Kringle,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PLAU	HGNC	ENSG00000122861				163	0	0	114	16	12.3077
TAF3	0	genome.wustl.edu	37	10	8006284	8006284	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	8006284	8006284	A	-	DEL	TAF3	ENST00000344293	human	ensembl	74_37	+1	known	frame_shift_del	c.811	p.T272fs	0.993	NULL	pfam_BTP,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Histone-fold,smart_BTP,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	TAF3	HGNC	ENSG00000165632				166	0	0	123	30	19.6078
LIPK	0	genome.wustl.edu	37	10	90492221	90492222	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	90492221	90492222	-	T	INS	LIPK	ENST00000404190	human	ensembl	74_37	+1	known	frame_shift_ins	c.582_583	p.A196fs	1.000:1.000	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPK	HGNC	ENSG00000204021				395	0	0	347	61	14.951
ZNF518A	0	genome.wustl.edu	37	10	97919393	97919393	+	RNA	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	10	97919393	97919393	T	-	DEL	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853				154	0	0	127	38	23.0303
MUC6	0	genome.wustl.edu	37	11	1024987	1024988	+	Frame_Shift_Del	DEL	CC	CC	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	1024987	1024988	CC	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	frame_shift_del	c.3082_3081	p.L1027fs	0.997:0.318	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				48	0	0	36	9	20
MMP12	0	genome.wustl.edu	37	11	102743627	102743627	+	RNA	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	102743627	102743627	C	-	DEL	MMP12	ENST00000326227	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MMP12	HGNC	ENSG00000110347				39	0	0	41	10	19.6078
CASP5	0	genome.wustl.edu	37	11	104874019	104874020	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	104874019	104874020	AC	-	DEL	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	frame_shift_del	c.564_563	p.C188fs	0.002:0.001	pirsf_Caspase_IL-1_beta	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757				267	0	0	191	35	15.4867
ATM	0	genome.wustl.edu	37	11	108216477	108216477	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	108216477	108216477	A	-	DEL	ATM	ENST00000278616	human	ensembl	74_37	+1	known	frame_shift_del	c.8426	p.K2811fs	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311				194	0	0	144	33	18.6441
DSCAML1	0	genome.wustl.edu	37	11	117651445	117651445	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	117651445	117651445	C	-	DEL	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	frame_shift_del	c.307	p.V103fs	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				88	0	0	55	13	19.1176
CALCA	0	genome.wustl.edu	37	11	14991488	14991489	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	14991488	14991489	-	CT	INS	CALCA	ENST00000331587	human	ensembl	74_37	-1	known	frame_shift_ins	c.220_219	p.G73fs	0.932:0.935	pfam_Procalcitonin/adrenomedullin	pfam_Procalcitonin/adrenomedullin,smart_Calcitonin_peptide-like,prints_Calcitonin	-	no_errors	CALCA	HGNC	ENSG00000110680				183	0	0	131	13	9.02778
KRTAP5-5	0	genome.wustl.edu	37	11	1651724	1651725	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	1651724	1651725	-	A	INS	KRTAP5-5	ENST00000399676	human	ensembl	74_37	+1	known	frame_shift_ins	c.654_655	p.P219fs	0.999:0.998	NULL	NULL	-	no_errors	KRTAP5-5	HGNC	ENSG00000185940				124	0	0	116	26	18.3099
GTF2H1	0	genome.wustl.edu	37	11	18369475	18369475	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	18369475	18369475	A	-	DEL	GTF2H1	ENST00000524753	human	ensembl	74_37	+1	putative	frame_shift_del	c.450	p.K152fs	0.001	NULL	pfam_BSD,pfscan_BSD	-	no_errors	GTF2H1	HGNC	ENSG00000110768				62	0	0	44	14	24.1379
NAT10	0	genome.wustl.edu	37	11	34129782	34129782	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	34129782	34129782	A	-	DEL	NAT10	ENST00000257829	human	ensembl	74_37	+1	known	frame_shift_del	c.10	p.K5fs	1.000	NULL	pfam_Helicase_dom,pfam_DUF1726,superfamily_Acyl_CoA_acyltransferase,superfamily_P-loop_NTPase,pfscan_GNAT_dom	-	no_errors	NAT10	HGNC	ENSG00000135372				295	0	0	237	53	18.2759
APIP	0	genome.wustl.edu	37	11	34904909	34904909	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	34904909	34904909	C	-	DEL	APIP	ENST00000278359	human	ensembl	74_37	-1	known	frame_shift_del	c.655	p.E219fs	1.000	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N,tigrfam_MethylthioRu-1-P_deHdtase_MtnB	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N,tigrfam_MethylthioRu-1-P_deHdtase_MtnB	-	no_errors	APIP	HGNC	ENSG00000149089				500	0	0	418	92	18.0392
ARHGAP1	0	genome.wustl.edu	37	11	46702224	46702224	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	46702224	46702224	G	-	DEL	ARHGAP1	ENST00000311956	human	ensembl	74_37	-1	known	frame_shift_del	c.709	p.L237fs	0.993	superfamily_Rho_GTPase_activation_prot	pfam_RhoGAP_dom,pfam_CRAL-TRIO_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_RhoGAP_dom,pfscan_CRAL-TRIO_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP1	HGNC	ENSG00000175220				38	0	0	38	11	22.449
ACP2	0	genome.wustl.edu	37	11	47266285	47266285	+	Splice_Site	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	47266285	47266285	C	-	DEL	ACP2	ENST00000256997	human	ensembl	74_37	-1	known	splice_site_del	c.772+1	e7+1	1.000	-	-	-	no_errors	ACP2	HGNC	ENSG00000134575				118	0	0	84	17	16.8317
RTN3	0	genome.wustl.edu	37	11	63487620	63487620	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	63487620	63487620	A	-	DEL	RTN3	ENST00000377819	human	ensembl	74_37	+1	known	frame_shift_del	c.1646	p.T551fs	0.000	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318				147	0	0	110	29	20.8633
NRXN2	0	genome.wustl.edu	37	11	64427828	64427829	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	64427828	64427829	-	C	INS	NRXN2	ENST00000265459	human	ensembl	74_37	-1	known	frame_shift_ins	c.2365_2364	p.Q788fs	1.000:1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076				131	0	0	94	14	12.963
RASGRP2	0	genome.wustl.edu	37	11	64508388	64508388	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	64508388	64508388	C	-	DEL	RASGRP2	ENST00000377486	human	ensembl	74_37	-1	putative	frame_shift_del	c.403	p.A135fs	0.001	NULL	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRP2	HGNC	ENSG00000068831				80	0	0	51	17	25
MEN1	0	genome.wustl.edu	37	11	64572093	64572093	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	64572093	64572093	G	-	DEL	MEN1	ENST00000337652	human	ensembl	74_37	-1	known	frame_shift_del	c.1561	p.R521fs	0.999	pfam_Menin	pfam_Menin	-	no_errors	MEN1	HGNC	ENSG00000133895				27	0	0	25	4	13.7931
SLC25A45	0	genome.wustl.edu	37	11	65144119	65144119	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	65144119	65144119	C	-	DEL	SLC25A45	ENST00000398802	human	ensembl	74_37	-1	known	frame_shift_del	c.626	p.G209fs	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A45	HGNC	ENSG00000162241				108	0	0	80	15	15.7895
DRAP1	0	genome.wustl.edu	37	11	65688801	65688801	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	65688801	65688801	C	-	DEL	DRAP1	ENST00000312515	human	ensembl	74_37	+1	known	frame_shift_del	c.513	p.P173fs	1.000	NULL	pfam_CBFA_NFYB_domain,pfam_Histone_core_D,superfamily_Histone-fold	-	no_errors	DRAP1	HGNC	ENSG00000175550				39	0	0	38	14	26.9231
KLC2	0	genome.wustl.edu	37	11	66033656	66033656	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	66033656	66033656	G	-	DEL	KLC2	ENST00000316924	human	ensembl	74_37	+1	known	frame_shift_del	c.1695	p.G567fs	1.000	NULL	pfam_Rabaptin_Rab5-bd_dom,pfam_TPR_1,smart_TPR_repeat,prints_Kinesin_light,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KLC2	HGNC	ENSG00000174996				51	0	0	33	7	17.5
OR2AG2	0	genome.wustl.edu	37	11	6789985	6789986	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	6789985	6789986	GA	-	DEL	OR2AG2	ENST00000338569	human	ensembl	74_37	-1	known	frame_shift_del	c.204_203	p.L68fs	0.006:0.023	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2AG2	HGNC	ENSG00000188124				235	0	0	158	35	18.1347
CTTN	0	genome.wustl.edu	37	11	70275243	70275244	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	70275243	70275244	GA	-	DEL	CTTN	ENST00000301843	human	ensembl	74_37	+1	known	frame_shift_del	c.1114_1115	p.R373fs	0.993:1.000	NULL	pfam_Hs1_Cortactin,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_Hs1_Cortactin,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	CTTN	HGNC	ENSG00000085733				94	0	0	104	7	6.30631
UVRAG	0	genome.wustl.edu	37	11	75694431	75694431	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	75694431	75694431	A	-	DEL	UVRAG	ENST00000356136	human	ensembl	74_37	+1	known	frame_shift_del	c.700	p.S237fs	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	UVRAG	HGNC	ENSG00000198382				54	0	0	44	13	22.807
TENM4	0	genome.wustl.edu	37	11	78449566	78449566	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	78449566	78449566	G	-	DEL	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	frame_shift_del	c.2806	p.L936fs	0.954	superfamily_CarboxyPept-like_regulatory	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				73	0	0	35	11	23.913
STK33	0	genome.wustl.edu	37	11	8496262	8496262	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	8496262	8496262	T	-	DEL	STK33	ENST00000315204	human	ensembl	74_37	-1	known	frame_shift_del	c.191	p.N64fs	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK33	HGNC	ENSG00000130413				167	0	0	102	33	24.4444
SYTL2	0	genome.wustl.edu	37	11	85435356	85435356	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	85435356	85435356	G	-	DEL	SYTL2	ENST00000359152	human	ensembl	74_37	-1	known	frame_shift_del	c.3716	p.P1239fs	0.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYTL2	HGNC	ENSG00000137501				283	0	0	187	38	16.8889
ZNF143	0	genome.wustl.edu	37	11	9501082	9501082	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	11	9501082	9501082	A	-	DEL	ZNF143	ENST00000396602	human	ensembl	74_37	+1	known	frame_shift_del	c.634	p.M214fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF143	HGNC	ENSG00000166478				160	0	0	158	31	16.4021
KLRC3	0	genome.wustl.edu	37	12	10573125	10573127	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	10573125	10573127	AGA	-	DEL	KLRC3	ENST00000381903	human	ensembl	74_37	-1	known	in_frame_del	c.25_23	p.F8in_frame_del	0.000:0.000:0.000	NULL	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRC3	HGNC	ENSG00000205810				224	0	0	207	12	5.47945
ENSG00000255641	0	genome.wustl.edu	37	12	10588561	10588563	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	10588561	10588563	AGA	-	DEL	ENSG00000255641	ENST00000539033	human	ensembl	74_37	-1	known	in_frame_del	c.25_23	p.F8in_frame_del	0.000:0.000:0.000	NULL	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	NKG2-E	Uniprot_gn	ENSG00000255641				493	0	0	390	31	7.36342
VPS29	0	genome.wustl.edu	37	12	110929816	110929816	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	110929816	110929816	T	-	DEL	VPS29	ENST00000549578	human	ensembl	74_37	-1	known	frame_shift_del	c.543	p.K181fs	0.998	NULL	tigrfam_Phosphodiesterase_MJ0936	-	no_errors	VPS29	HGNC	ENSG00000111237				110	0	0	93	18	16.2162
TBX5	0	genome.wustl.edu	37	12	114793736	114793736	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	114793736	114793736	G	-	DEL	TBX5	ENST00000310346	human	ensembl	74_37	-1	known	frame_shift_del	c.1158	p.S387fs	0.996	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX5	HGNC	ENSG00000089225				121	0	0	99	7	6.60377
TBX5	0	genome.wustl.edu	37	12	114841604	114841604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	114841604	114841604	C	-	DEL	TBX5	ENST00000310346	human	ensembl	74_37	-1	known	frame_shift_del	c.100	p.A34fs	0.981	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX5	HGNC	ENSG00000089225				84	0	0	57	13	18.5714
KNTC1	0	genome.wustl.edu	37	12	123087620	123087620	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	123087620	123087620	A	-	DEL	KNTC1	ENST00000333479	human	ensembl	74_37	+1	known	frame_shift_del	c.4931	p.K1646fs	1.000	pfam_RZZ-complex_KNTC1/ROD_C	pfam_RZZ-complex_KNTC1/ROD_C,superfamily_Quino_amine_DH_bsu,superfamily_WD40_repeat_dom,superfamily_PAH	-	no_errors	KNTC1	HGNC	ENSG00000184445				78	0	0	40	18	31.0345
DHX37	0	genome.wustl.edu	37	12	125449022	125449024	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	125449022	125449024	AGG	-	DEL	DHX37	ENST00000308736	human	ensembl	74_37	-1	known	in_frame_del	c.1963_1961	p.S654in_frame_del	1.000:1.000:1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX37	HGNC	ENSG00000150990				92	0	0	94	14	12.963
PLEKHA5	0	genome.wustl.edu	37	12	19427575	19427575	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	19427575	19427575	A	-	DEL	PLEKHA5	ENST00000317589	human	ensembl	74_37	+1	known	frame_shift_del	c.953	p.K320fs	1.000	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126				144	0	0	98	21	17.6471
PDE3A	0	genome.wustl.edu	37	12	20522723	20522723	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	20522723	20522723	G	-	DEL	PDE3A	ENST00000359062	human	ensembl	74_37	+1	known	frame_shift_del	c.505	p.E171fs	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3A	HGNC	ENSG00000172572				38	0	0	36	3	7.69231
KLHL42	0	genome.wustl.edu	37	12	27950769	27950769	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	27950769	27950769	G	-	DEL	KLHL42	ENST00000381271	human	ensembl	74_37	+1	known	frame_shift_del	c.1188	p.C399fs	0.988	NULL	pfam_Kelch_1,pfam_BACK,superfamily_BTB/POZ_fold,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL42	HGNC	ENSG00000087448				297	0	0	257	37	12.585
FOXM1	0	genome.wustl.edu	37	12	2968136	2968136	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	2968136	2968136	G	-	DEL	FOXM1	ENST00000342628	human	ensembl	74_37	-1	known	frame_shift_del	c.2074	p.L692fs	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXM1	HGNC	ENSG00000111206				144	0	0	112	25	18.2482
YAF2	0	genome.wustl.edu	37	12	42555564	42555564	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	42555564	42555564	T	-	DEL	YAF2	ENST00000442791	human	ensembl	74_37	-1	known	frame_shift_del	c.228	p.K76fs	0.993	NULL	pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	YAF2	HGNC	ENSG00000015153				133	0	0	86	21	19.6262
PCED1B	0	genome.wustl.edu	37	12	47628998	47628998	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	47628998	47628998	G	-	DEL	PCED1B	ENST00000432328	human	ensembl	74_37	+1	known	frame_shift_del	c.152	p.E53fs	1.000	NULL	NULL	-	no_errors	PCED1B	HGNC	ENSG00000179715				83	0	0	56	12	17.6471
KMT2D	0	genome.wustl.edu	37	12	49431874	49431874	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	49431874	49431874	C	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.9265	p.V3089fs	0.784	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				41	0	0	33	8	19.5122
KMT2D	0	genome.wustl.edu	37	12	49434492	49434492	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	49434492	49434492	G	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.7061	p.P2354fs	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				55	0	0	36	7	16.2791
DCD	0	genome.wustl.edu	37	12	55039010	55039010	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	55039010	55039010	C	-	DEL	DCD	ENST00000293371	human	ensembl	74_37	-1	known	frame_shift_del	c.236	p.G79fs	0.000	NULL	NULL	-	no_errors	DCD	HGNC	ENSG00000161634				175	0	0	138	28	16.8675
OR6C75	0	genome.wustl.edu	37	12	55759486	55759486	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	55759486	55759486	T	-	DEL	OR6C75	ENST00000343399	human	ensembl	74_37	+1	known	frame_shift_del	c.592	p.L200fs	0.582	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C75	HGNC	ENSG00000187857				264	0	0	160	110	40.7407
SHMT2	0	genome.wustl.edu	37	12	57627077	57627077	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	57627077	57627077	G	-	DEL	SHMT2	ENST00000328923	human	ensembl	74_37	+1	known	frame_shift_del	c.972	p.G326fs	1.000	pfam_Ser_HO-MeTrfase,superfamily_PyrdxlP-dep_Trfase,pirsf_Ser_HO-MeTrfase	pfam_Ser_HO-MeTrfase,superfamily_PyrdxlP-dep_Trfase,pirsf_Ser_HO-MeTrfase	-	no_errors	SHMT2	HGNC	ENSG00000182199				74	0	0	77	12	13.4831
GLI1	0	genome.wustl.edu	37	12	57860075	57860075	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	57860075	57860075	G	-	DEL	GLI1	ENST00000228682	human	ensembl	74_37	+1	known	frame_shift_del	c.815	p.G274fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI1	HGNC	ENSG00000111087				225	0	0	196	39	16.5957
MBD6	0	genome.wustl.edu	37	12	57920916	57920916	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	57920916	57920916	T	-	DEL	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_del	c.1988	p.F664fs	0.604	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987				44	0	0	27	9	25
AGAP2	0	genome.wustl.edu	37	12	58124639	58124639	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	58124639	58124639	C	-	DEL	AGAP2	ENST00000547588	human	ensembl	74_37	-1	known	frame_shift_del	c.2243	p.G748fs	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP2	HGNC	ENSG00000135439				28	0	0	30	9	23.0769
USP15	0	genome.wustl.edu	37	12	62786091	62786091	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	62786091	62786091	A	-	DEL	USP15	ENST00000280377	human	ensembl	74_37	+1	known	frame_shift_del	c.2344	p.K783fs	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,superfamily_RNA3'P_cycl/enolpyr_Trfase_a/b,smart_Pept_C19_DUSP,pfscan_Peptidase_C19/C67	-	no_errors	USP15	HGNC	ENSG00000135655				96	0	0	73	16	17.9775
VAMP1	0	genome.wustl.edu	37	12	6574049	6574052	+	Frame_Shift_Del	DEL	TACT	TACT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	TACT	TACT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	6574049	6574052	TACT	-	DEL	VAMP1	ENST00000361716	human	ensembl	74_37	-1	known	frame_shift_del	c.347_344	p.K115fs	1.000:1.000:1.000:1.000	pirsf_Synaptobrevin_met/fun	pfam_Synaptobrevin,pirsf_Synaptobrevin_met/fun,pfscan_Synaptobrevin,prints_Synaptobrevin	-	no_errors	VAMP1	HGNC	ENSG00000139190				225	0	0	215	52	19.4757
GRIP1	0	genome.wustl.edu	37	12	66839111	66839111	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	66839111	66839111	G	-	DEL	GRIP1	ENST00000359742	human	ensembl	74_37	-1	known	frame_shift_del	c.1532	p.P511fs	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRIP1	HGNC	ENSG00000155974				166	0	0	108	26	19.403
SLC6A15	0	genome.wustl.edu	37	12	85285889	85285889	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	85285889	85285889	T	-	DEL	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	frame_shift_del	c.11	p.N4fs	1.000	NULL	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041				242	0	0	198	32	13.913
VEZT	0	genome.wustl.edu	37	12	95650969	95650969	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	95650969	95650969	T	-	DEL	VEZT	ENST00000436874	human	ensembl	74_37	+1	known	frame_shift_del	c.212	p.S74fs	0.065	NULL	NULL	-	no_errors	VEZT	HGNC	ENSG00000028203				51	0	0	37	12	24.4898
WNK1	0	genome.wustl.edu	37	12	989023	989023	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	12	989023	989023	G	-	DEL	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	frame_shift_del	c.4152	p.V1386fs	0.989	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237				165	0	0	122	13	9.62963
COL4A1	0	genome.wustl.edu	37	13	110838821	110838821	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	110838821	110838821	G	-	DEL	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	frame_shift_del	c.1808	p.P603fs	1.000	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498				133	0	0	137	14	9.27152
TNFRSF19	0	genome.wustl.edu	37	13	24164359	24164359	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	24164359	24164359	T	-	DEL	TNFRSF19	ENST00000382258	human	ensembl	74_37	+1	known	frame_shift_del	c.37	p.F14fs	0.003	NULL	smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_19	-	no_errors	TNFRSF19	HGNC	ENSG00000127863				168	0	0	102	6	5.55556
SLC46A3	0	genome.wustl.edu	37	13	29286951	29286951	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	29286951	29286951	A	-	DEL	SLC46A3	ENST00000266943	human	ensembl	74_37	-1	known	frame_shift_del	c.926	p.L309fs	0.823	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC46A3	HGNC	ENSG00000139508				193	0	0	136	25	15.528
PDS5B	0	genome.wustl.edu	37	13	33306278	33306278	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	33306278	33306278	C	-	DEL	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	frame_shift_del	c.2164	p.R724fs	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642				131	0	0	79	16	16.8421
ZC3H13	0	genome.wustl.edu	37	13	46543661	46543661	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	46543661	46543661	T	-	DEL	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	frame_shift_del	c.3018	p.K1006fs	0.998	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200				235	0	0	172	34	16.5049
SERPINE3	0	genome.wustl.edu	37	13	51936041	51936041	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	51936041	51936041	T	-	DEL	SERPINE3	ENST00000521255	human	ensembl	74_37	+1	known	frame_shift_del	c.1183	p.F396fs	0.051	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINE3	HGNC	ENSG00000253309				187	0	0	95	22	18.8034
MYCBP2	0	genome.wustl.edu	37	13	77641917	77641917	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	77641917	77641917	G	-	DEL	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	frame_shift_del	c.12254	p.P4085fs	1.000	superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810				359	0	0	307	84	21.4834
ABCC4	0	genome.wustl.edu	37	13	95735432	95735432	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	95735432	95735432	A	-	DEL	ABCC4	ENST00000376887	human	ensembl	74_37	-1	known	frame_shift_del	c.2648	p.L883fs	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257				158	0	0	124	26	17.3333
FARP1	0	genome.wustl.edu	37	13	99092476	99092476	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	99092476	99092476	C	-	DEL	FARP1	ENST00000376586	human	ensembl	74_37	+1	known	frame_shift_del	c.2709	p.P905fs	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM-adjacent,pfam_FERM_central,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP1	HGNC	ENSG00000152767				174	0	0	109	10	8.40336
UBAC2	0	genome.wustl.edu	37	13	99853696	99853696	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	13	99853696	99853696	T	-	DEL	UBAC2	ENST00000376440	human	ensembl	74_37	+1	known	frame_shift_del	c.31	p.L12fs	0.010	NULL	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAC2	HGNC	ENSG00000134882				76	0	0	52	9	14.7541
WARS	0	genome.wustl.edu	37	14	100820838	100820838	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	100820838	100820838	C	-	DEL	WARS	ENST00000355338	human	ensembl	74_37	-1	known	frame_shift_del	c.488	p.G163fs	1.000	pfam_aa-tRNA-synth_Ic,tigrfam_Trp-tRNA-ligase	pfam_aa-tRNA-synth_Ic,pfam_WHEP-TRS,superfamily_S15_NS1_RNA-bd,pfscan_WHEP-TRS,prints_Trp-tRNA-ligase,tigrfam_Trp-tRNA-ligase	-	no_errors	WARS	HGNC	ENSG00000140105				136	0	0	103	38	26.9504
PPP1R13B	0	genome.wustl.edu	37	14	104208418	104208418	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	104208418	104208418	G	-	DEL	PPP1R13B	ENST00000202556	human	ensembl	74_37	-1	known	frame_shift_del	c.1531	p.Q511fs	0.045	NULL	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PPP1R13B	HGNC	ENSG00000088808				185	0	0	153	26	14.5251
KIF26A	0	genome.wustl.edu	37	14	104642560	104642560	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	104642560	104642560	C	-	DEL	KIF26A	ENST00000423312	human	ensembl	74_37	+1	known	frame_shift_del	c.3435	p.P1147fs	0.011	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF26A	HGNC	ENSG00000066735				8	0	0	5	3	37.5
C14orf180	0	genome.wustl.edu	37	14	105054103	105054103	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	105054103	105054103	C	-	DEL	C14orf180	ENST00000410013	human	ensembl	74_37	+1	known	frame_shift_del	c.129	p.S46fs	0.048	NULL	NULL	-	no_errors	C14orf180	HGNC	ENSG00000184601				21	0	0	8	3	27.2727
INF2	0	genome.wustl.edu	37	14	105174185	105174185	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	105174185	105174185	C	-	DEL	INF2	ENST00000392634	human	ensembl	74_37	+1	known	frame_shift_del	c.1581	p.V530fs	0.011	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485				23	0	0	16	10	38.4615
RPGRIP1	0	genome.wustl.edu	37	14	21762941	21762942	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	21762941	21762942	-	T	INS	RPGRIP1	ENST00000206660	human	ensembl	74_37	+1	known	frame_shift_ins	c.191_192	p.W65fs	0.985:0.998	NULL	pfam_DUF3250,superfamily_C2_dom	-	no_errors	RPGRIP1	HGNC	ENSG00000092200				36	0	0	35	13	27.0833
ACIN1	0	genome.wustl.edu	37	14	23549379	23549379	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	23549379	23549379	C	-	DEL	ACIN1	ENST00000262710	human	ensembl	74_37	-1	known	frame_shift_del	c.1339	p.A447fs	0.998	NULL	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	ACIN1	HGNC	ENSG00000100813				157	0	0	111	22	16.5414
SLC7A8	0	genome.wustl.edu	37	14	23652029	23652029	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	23652029	23652029	C	-	DEL	SLC7A8	ENST00000316902	human	ensembl	74_37	-1	known	frame_shift_del	c.95	p.G32fs	1.000	tigrfam_L_AA_transporter	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1,tigrfam_L_AA_transporter	-	no_errors	SLC7A8	HGNC	ENSG00000092068				257	0	0	194	40	17.094
BNIP3P1	0	genome.wustl.edu	37	14	28733889	28733890	+	RNA	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	28733889	28733890	-	A	INS	BNIP3P1	ENST00000550043	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997:0.930	-	-	-	no_errors	BNIP3P1	HGNC	ENSG00000197358				120	0	0	104	20	16.129
BAZ1A	0	genome.wustl.edu	37	14	35253125	35253125	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	35253125	35253125	T	-	DEL	BAZ1A	ENST00000360310	human	ensembl	74_37	-1	known	frame_shift_del	c.1840	p.M614fs	1.000	NULL	pfam_WSTF_Acf1_Cbp146,pfam_Bromodomain,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_WSTF_Acf1_Cbp146,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ1A	HGNC	ENSG00000198604				140	0	0	132	27	16.9811
FANCM	0	genome.wustl.edu	37	14	45642288	45642289	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	45642288	45642289	CT	-	DEL	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	frame_shift_del	c.2191_2192	p.S734fs	0.999:1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790				185	0	0	162	30	15.625
FBXO34	0	genome.wustl.edu	37	14	55818654	55818654	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	55818654	55818654	G	-	DEL	FBXO34	ENST00000313833	human	ensembl	74_37	+1	known	frame_shift_del	c.1546	p.G517fs	0.014	NULL	superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO34	HGNC	ENSG00000178974				205	0	0	181	31	14.6226
OTX2	0	genome.wustl.edu	37	14	57271049	57271049	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	57271049	57271049	G	-	DEL	OTX2	ENST00000339475	human	ensembl	74_37	-1	known	frame_shift_del	c.130	p.R44fs	0.947	superfamily_Homeodomain-like,pfscan_Homeobox_dom	pfam_Otx_TF_C,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Otx2_TF,prints_Otx_TF	-	no_errors	OTX2	HGNC	ENSG00000165588				68	0	0	52	10	16.129
ARID4A	0	genome.wustl.edu	37	14	58814451	58814451	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	58814451	58814451	A	-	DEL	ARID4A	ENST00000355431	human	ensembl	74_37	+1	known	frame_shift_del	c.1259	p.D423fs	0.935	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,smart_Chromo_domain/shadow,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4A	HGNC	ENSG00000032219				155	0	0	115	23	16.6667
KIAA0586	0	genome.wustl.edu	37	14	59014534	59014534	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	59014534	59014534	C	-	DEL	KIAA0586	ENST00000556134	human	ensembl	74_37	+1	known	frame_shift_del	c.4486	p.P1497fs	0.000	NULL	NULL	-	no_errors	KIAA0586	HGNC	ENSG00000100578				113	0	0	88	16	15.3846
PAPLN	0	genome.wustl.edu	37	14	73731295	73731295	+	Splice_Site	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	73731295	73731295	G	-	DEL	PAPLN	ENST00000427855	human	ensembl	74_37	+1	known	splice_site_del	c.2987-1	e21-1	0.840	-	-	-	no_errors	PAPLN	HGNC	ENSG00000100767				190	0	0	146	29	16.5714
BTBD7	0	genome.wustl.edu	37	14	93761193	93761193	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	14	93761193	93761193	T	-	DEL	BTBD7	ENST00000334746	human	ensembl	74_37	-1	known	frame_shift_del	c.173	p.K58fs	1.000	NULL	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD7	HGNC	ENSG00000011114				338	0	0	287	87	23.262
CHSY1	0	genome.wustl.edu	37	15	101717648	101717648	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	101717648	101717648	T	-	DEL	CHSY1	ENST00000254190	human	ensembl	74_37	-1	known	frame_shift_del	c.2354	p.N785fs	0.999	NULL	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY1	HGNC	ENSG00000131873				126	0	0	88	12	12
OR4M2	0	genome.wustl.edu	37	15	22369024	22369024	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	22369024	22369024	G	-	DEL	OR4M2	ENST00000332663	human	ensembl	74_37	+1	putative	frame_shift_del	c.449	p.G152fs	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4M2	HGNC	ENSG00000182974				463	1	0.215517	449	80	15.1229
SNORD115-32	0	genome.wustl.edu	37	15	25474162	25474162	+	RNA	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	25474162	25474162	A	-	DEL	SNORD115-32	ENST00000364079	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.941	-	-	-	no_errors	SNORD115-32	HGNC	ENSG00000200949				352	0	0	290	65	18.3099
HERC2	0	genome.wustl.edu	37	15	28525215	28525215	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	28525215	28525215	T	-	DEL	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	frame_shift_del	c.541	p.S181fs	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				132	0	0	122	28	18.6667
SPINT1	0	genome.wustl.edu	37	15	41146715	41146715	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	41146715	41146715	A	-	DEL	SPINT1	ENST00000344051	human	ensembl	74_37	+1	known	frame_shift_del	c.1109	p.K371fs	0.997	superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt	pfam_Prot_inh_Kunz-m,pfam_MANSC_N,pfam_LDrepeatLR_classA_rpt,superfamily_Prot_inh_Kunz-m,superfamily_LDrepeatLR_classA_rpt,superfamily_PKD_dom,smart_MANSC_N,smart_Prot_inh_Kunz-m,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_MANSC,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	SPINT1	HGNC	ENSG00000166145				87	0	0	80	9	10.1124
TP53BP1	0	genome.wustl.edu	37	15	43748303	43748304	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	43748303	43748304	AA	-	DEL	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	frame_shift_del	c.2503_2502	p.S835fs	0.074:0.102	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369				332	0	0	268	82	23.4286
DYX1C1	0	genome.wustl.edu	37	15	55759182	55759182	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	55759182	55759182	T	-	DEL	DYX1C1	ENST00000321149	human	ensembl	74_37	-1	known	frame_shift_del	c.583	p.I195fs	0.004	NULL	pfam_TPR_1,pfam_CS_dom,superfamily_HSP20-like_chaperone,smart_TPR_repeat,pfscan_CS_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	DYX1C1	HGNC	ENSG00000256061				78	0	0	49	17	25.7576
TRIP4	0	genome.wustl.edu	37	15	64686305	64686305	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	64686305	64686305	A	-	DEL	TRIP4	ENST00000261884	human	ensembl	74_37	+1	known	frame_shift_del	c.262	p.D90fs	0.948	NULL	pfam_ASCH_domain,pfam_Znf_C2HC5,superfamily_PUA-like_domain	-	no_errors	TRIP4	HGNC	ENSG00000103671				80	0	0	63	13	17.1053
PIAS1	0	genome.wustl.edu	37	15	68479955	68479955	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	68479955	68479955	T	-	DEL	PIAS1	ENST00000249636	human	ensembl	74_37	+1	known	frame_shift_del	c.1738	p.F581fs	0.998	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS1	HGNC	ENSG00000033800				144	0	0	103	33	24.2647
CYP11A1	0	genome.wustl.edu	37	15	74636221	74636221	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	74636221	74636221	G	-	DEL	CYP11A1	ENST00000268053	human	ensembl	74_37	-1	known	frame_shift_del	c.738	p.M247fs	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_mitochondrial,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP11A1	HGNC	ENSG00000140459				205	0	0	155	35	18.4211
MESDC2	0	genome.wustl.edu	37	15	81271633	81271633	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	81271633	81271633	T	-	DEL	MESDC2	ENST00000261758	human	ensembl	74_37	-1	known	frame_shift_del	c.632	p.K211fs	1.000	pfam_Mesoderm_development_cand-2	pfam_Mesoderm_development_cand-2	-	no_errors	MESDC2	HGNC	ENSG00000117899				128	0	0	90	20	18.1818
PDE8A	0	genome.wustl.edu	37	15	85634360	85634360	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	85634360	85634360	A	-	DEL	PDE8A	ENST00000310298	human	ensembl	74_37	+1	known	frame_shift_del	c.800	p.K269fs	1.000	pfam_PAS_fold,pfam_PAS_4,superfamily_PAS,pfscan_PAS,tigrfam_PAS	pfam_PDEase_catalytic_dom,pfam_Sig_transdc_resp-reg_receiver,pfam_PAS_fold,pfam_PAS_4,superfamily_PAS,superfamily_CheY-like_superfamily,smart_HD/PDEase_dom,pfscan_PAS,prints_PDEase,tigrfam_PAS	-	no_errors	PDE8A	HGNC	ENSG00000073417				98	0	0	93	7	7
AGBL1	0	genome.wustl.edu	37	15	87531266	87531267	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	87531266	87531267	-	T	INS	AGBL1	ENST00000441037	human	ensembl	74_37	+1	known	frame_shift_ins	c.3132_3133	p.A1046fs	0.004:0.004	NULL	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGBL1	HGNC	ENSG00000166748				440	0	0	334	82	19.7115
IDH2	0	genome.wustl.edu	37	15	90631918	90631918	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	90631918	90631918	C	-	DEL	IDH2	ENST00000330062	human	ensembl	74_37	-1	known	frame_shift_del	c.435	p.T146fs	0.686	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	-	no_errors	IDH2	HGNC	ENSG00000182054				148	0	0	118	22	15.7143
IQGAP1	0	genome.wustl.edu	37	15	91019925	91019925	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	91019925	91019925	A	-	DEL	IQGAP1	ENST00000268182	human	ensembl	74_37	+1	known	frame_shift_del	c.2815	p.N941fs	1.000	NULL	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,pfam_WW_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_WW_dom,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP1	HGNC	ENSG00000140575				219	0	0	185	55	22.9167
IGF1R	0	genome.wustl.edu	37	15	99500476	99500476	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	15	99500476	99500476	C	-	DEL	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	frame_shift_del	c.3909	p.L1305fs	0.970	pirsf_Tyr_kinase_insulin-like_rcpt	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443				39	0	0	22	2	8.33333
CLEC16A	0	genome.wustl.edu	37	16	11141159	11141159	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	11141159	11141159	T	-	DEL	CLEC16A	ENST00000409790	human	ensembl	74_37	+1	known	frame_shift_del	c.1826	p.L611fs	1.000	NULL	pfam_Uncharacterised_FPL	-	no_errors	CLEC16A	HGNC	ENSG00000038532				56	0	0	39	5	11.3636
ERCC4	0	genome.wustl.edu	37	16	14042196	14042196	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	14042196	14042196	A	-	DEL	ERCC4	ENST00000311895	human	ensembl	74_37	+1	known	frame_shift_del	c.2743	p.K916fs	0.507	superfamily_RuvA_2-like	pfam_ERCC4_domain,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_ERCC4_domain,tigrfam_Rad1	-	no_errors	ERCC4	HGNC	ENSG00000175595				261	0	0	198	45	18.5185
MKL2	0	genome.wustl.edu	37	16	14346299	14346300	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	14346299	14346300	-	C	INS	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	frame_shift_ins	c.2610_2611	p.R872fs	0.993:1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260				84	0	0	74	5	6.32911
TMEM204	0	genome.wustl.edu	37	16	1604942	1604942	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	1604942	1604942	C	-	DEL	TMEM204	ENST00000253934	human	ensembl	74_37	+1	known	frame_shift_del	c.596	p.R201fs	0.995	NULL	NULL	-	no_errors	TMEM204	HGNC	ENSG00000131634				57	0	0	42	4	8.69565
C16orf59	0	genome.wustl.edu	37	16	2514081	2514081	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	2514081	2514081	C	-	DEL	C16orf59	ENST00000361837	human	ensembl	74_37	+1	known	frame_shift_del	c.1006	p.G338fs	0.000	NULL	NULL	-	no_errors	C16orf59	HGNC	ENSG00000162062				41	0	0	24	5	17.2414
CEMP1	0	genome.wustl.edu	37	16	2580785	2580785	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	2580785	2580785	G	-	DEL	CEMP1	ENST00000382350	human	ensembl	74_37	-1	known	frame_shift_del	c.290	p.P97fs	0.002	NULL	NULL	-	no_errors	CEMP1	HGNC	ENSG00000205923				54	0	0	31	5	13.8889
KIAA0556	0	genome.wustl.edu	37	16	27751808	27751809	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	27751808	27751809	CT	-	DEL	KIAA0556	ENST00000261588	human	ensembl	74_37	+1	known	frame_shift_del	c.2190_2191	p.L732fs	0.001:0.006	NULL	superfamily_Thaumatin	-	no_errors	KIAA0556	HGNC	ENSG00000047578				184	0	0	163	29	15.1042
SH2B1	0	genome.wustl.edu	37	16	28878124	28878124	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	28878124	28878124	G	-	DEL	SH2B1	ENST00000322610	human	ensembl	74_37	+1	known	frame_shift_del	c.709	p.G238fs	0.999	NULL	pfam_Phe_ZIP,pfam_Pleckstrin_homology,pfam_SH2,superfamily_Phe_ZIP,smart_Pleckstrin_homology,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SH2B1	HGNC	ENSG00000178188				40	0	0	29	10	25.641
PRRT2	0	genome.wustl.edu	37	16	29825016	29825016	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	29825016	29825016	C	-	DEL	PRRT2	ENST00000567659	human	ensembl	74_37	+1	known	frame_shift_del	c.641	p.R217fs	1.000	NULL	pfam_CD225/Dispanin_fam	-	no_errors	PRRT2	HGNC	ENSG00000167371				17	0	0	20	4	16.6667
DOC2A	0	genome.wustl.edu	37	16	30018527	30018529	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	30018527	30018529	CTT	-	DEL	DOC2A	ENST00000350119	human	ensembl	74_37	-1	known	in_frame_del	c.621_619	p.K207in_frame_del	1.000:1.000:1.000	superfamily_C2_dom,smart_C2_dom,pirsf_Doc2	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Doc2,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	DOC2A	HGNC	ENSG00000149927				89	0	0	74	14	15.9091
YPEL3	0	genome.wustl.edu	37	16	30106447	30106447	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	30106447	30106447	C	-	DEL	YPEL3	ENST00000398841	human	ensembl	74_37	-1	known	frame_shift_del	c.252	p.R85fs	0.998	pfam_Yippee/Mis18	pfam_Yippee/Mis18	-	no_errors	YPEL3	HGNC	ENSG00000090238				45	0	0	33	6	15.3846
BCKDK	0	genome.wustl.edu	37	16	31123292	31123292	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	31123292	31123292	C	-	DEL	BCKDK	ENST00000219794	human	ensembl	74_37	+1	known	frame_shift_del	c.1038	p.L348fs	1.000	pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pfscan_Sig_transdc_His_kinase_core	pfam_BCDHK/PDK_N,pfam_HATPase_ATP-bd,superfamily_BCDHK/PDK_N,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pfscan_Sig_transdc_His_kinase_core,prints_Sig_transdc_His_kin-like_C	-	no_errors	BCKDK	HGNC	ENSG00000103507				89	0	0	73	12	14.1176
PPL	0	genome.wustl.edu	37	16	4944500	4944500	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	4944500	4944500	G	-	DEL	PPL	ENST00000345988	human	ensembl	74_37	-1	known	frame_shift_del	c.1362	p.T455fs	0.933	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898				105	0	0	68	10	12.8205
CBFB	0	genome.wustl.edu	37	16	67070569	67070570	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	67070569	67070570	TC	-	DEL	CBFB	ENST00000290858	human	ensembl	74_37	+1	known	frame_shift_del	c.193_194	p.L66fs	1.000:1.000	pfam_CBF_beta,superfamily_CBF_beta	pfam_CBF_beta,superfamily_CBF_beta	-	no_errors	CBFB	HGNC	ENSG00000067955				141	0	0	93	20	17.6991
PHLPP2	0	genome.wustl.edu	37	16	71748706	71748707	+	Splice_Site	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	71748706	71748707	-	A	INS	PHLPP2	ENST00000568954	human	ensembl	74_37	-1	known	splice_site_ins	c.1-3_4	e1-2	1.000:0.943	-	-	-	no_errors	PHLPP2	HGNC	ENSG00000040199				75	0	0	44	11	20
NPIPB15	0	genome.wustl.edu	37	16	74423895	74423895	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	74423895	74423895	C	-	DEL	NPIPB15	ENST00000429990	human	ensembl	74_37	+1	known	frame_shift_del	c.609	p.P205fs	0.024	NULL	NULL	-	no_errors	NPIPB15	HGNC	ENSG00000196436				769	0	0	764	42	5.21092
NUDT7	0	genome.wustl.edu	37	16	77775744	77775744	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	77775744	77775744	A	-	DEL	NUDT7	ENST00000268533	human	ensembl	74_37	+1	known	frame_shift_del	c.614	p.K207fs	0.000	NULL	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT7	HGNC	ENSG00000140876				151	0	0	104	33	24.0876
VAT1L	0	genome.wustl.edu	37	16	77859261	77859262	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	77859261	77859262	-	C	INS	VAT1L	ENST00000302536	human	ensembl	74_37	+1	known	frame_shift_ins	c.482_483	p.M163fs	1.000:1.000	superfamily_GroES-like,smart_PKS_ER	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	VAT1L	HGNC	ENSG00000171724				68	0	0	53	8	13.1148
ATP2C2	0	genome.wustl.edu	37	16	84492752	84492752	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	84492752	84492752	T	-	DEL	ATP2C2	ENST00000262429	human	ensembl	74_37	+1	known	frame_shift_del	c.2174	p.Y727fs	1.000	prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2C2	HGNC	ENSG00000064270				157	0	0	98	29	22.8346
METTL22	0	genome.wustl.edu	37	16	8722955	8722957	+	In_Frame_Del	DEL	ATC	ATC	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	ATC	ATC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	16	8722955	8722957	ATC	-	DEL	METTL22	ENST00000381920	human	ensembl	74_37	+1	known	in_frame_del	c.502_504	p.I169in_frame_del	0.000:0.787:0.798	NULL	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL22	HGNC	ENSG00000067365				469	0	0	311	47	13.1285
MFAP4	0	genome.wustl.edu	37	17	19289686	19289686	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	19289686	19289686	G	-	DEL	MFAP4	ENST00000395592	human	ensembl	74_37	-1	known	frame_shift_del	c.249	p.S84fs	0.019	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	MFAP4	HGNC	ENSG00000166482				49	0	0	25	8	24.2424
ALDH3A1	0	genome.wustl.edu	37	17	19641649	19641649	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	19641649	19641649	G	-	DEL	ALDH3A1	ENST00000225740	human	ensembl	74_37	-1	known	frame_shift_del	c.1334	p.P445fs	0.889	superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	-	no_errors	ALDH3A1	HGNC	ENSG00000108602				120	0	0	108	25	18.797
SPECC1	0	genome.wustl.edu	37	17	20108263	20108263	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	20108263	20108263	A	-	DEL	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	frame_shift_del	c.901	p.N303fs	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487				221	0	0	161	35	17.8571
UBBP4	0	genome.wustl.edu	37	17	21731489	21731489	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	21731489	21731489	C	-	DEL	UBBP4	ENST00000578713	human	ensembl	74_37	+1	putative	frame_shift_del	c.564	p.D191fs	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBBP4	HGNC	ENSG00000263563				80	0	0	63	8	11.2676
SLFN12L	0	genome.wustl.edu	37	17	33806619	33806620	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	33806619	33806620	-	A	INS	SLFN12L	ENST00000449046	human	ensembl	74_37	-1	known	frame_shift_ins	c.703_702	p.N234fs	0.870:0.889	NULL	pfam_ATPase_AAA-4	-	no_errors	SLFN12L	HGNC	ENSG00000205045				73	0	0	48	12	20
CDK12	0	genome.wustl.edu	37	17	37627892	37627892	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	37627892	37627892	C	-	DEL	CDK12	ENST00000447079	human	ensembl	74_37	+1	known	frame_shift_del	c.1807	p.P604fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK12	HGNC	ENSG00000167258				360	0	0	332	54	13.9896
WNK4	0	genome.wustl.edu	37	17	40939870	40939870	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	40939870	40939870	G	-	DEL	WNK4	ENST00000246914	human	ensembl	74_37	+1	known	frame_shift_del	c.1816	p.V608fs	0.004	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK4	HGNC	ENSG00000126562				91	0	0	80	18	18.3673
GPATCH8	0	genome.wustl.edu	37	17	42477238	42477238	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	42477238	42477238	G	-	DEL	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	frame_shift_del	c.2207	p.P736fs	0.986	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566				231	0	0	154	54	25.9615
CCDC103	0	genome.wustl.edu	37	17	42979740	42979740	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	42979740	42979740	C	-	DEL	CCDC103	ENST00000410006	human	ensembl	74_37	+1	known	frame_shift_del	c.284	p.L97fs	0.000	NULL	NULL	-	no_errors	CCDC103	HGNC	ENSG00000167131				157	0	0	130	26	16.6667
CXCL16	0	genome.wustl.edu	37	17	4638521	4638521	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	4638521	4638521	T	-	DEL	CXCL16	ENST00000293778	human	ensembl	74_37	-1	known	frame_shift_del	c.641	p.N214fs	0.000	NULL	NULL	-	no_errors	CXCL16	HGNC	ENSG00000161921				37	0	0	32	8	20
PHB	0	genome.wustl.edu	37	17	47486482	47486483	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	47486482	47486483	CT	-	DEL	PHB	ENST00000300408	human	ensembl	74_37	-1	known	frame_shift_del	c.432_431	p.E144fs	1.000:1.000	pfam_Band_7,smart_Band_7,prints_Prohibitin	pfam_Band_7,smart_Band_7,prints_Prohibitin	-	no_errors	PHB	HGNC	ENSG00000167085				65	0	0	53	8	13.1148
TAC4	0	genome.wustl.edu	37	17	47918915	47918915	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	47918915	47918915	T	-	DEL	TAC4	ENST00000334568	human	ensembl	74_37	-1	known	frame_shift_del	c.249	p.A84fs	0.021	NULL	NULL	-	no_errors	TAC4	HGNC	ENSG00000176358				70	0	0	79	20	20.202
XYLT2	0	genome.wustl.edu	37	17	48433967	48433967	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	48433967	48433967	C	-	DEL	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	frame_shift_del	c.1578	p.G529fs	1.000	pfam_XylT	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532				106	0	0	74	10	11.9048
C17orf64	0	genome.wustl.edu	37	17	58506875	58506875	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	58506875	58506875	C	-	DEL	C17orf64	ENST00000269127	human	ensembl	74_37	+1	known	frame_shift_del	c.582	p.L196fs	0.001	NULL	NULL	-	no_errors	C17orf64	HGNC	ENSG00000141371				73	0	0	54	9	14.2857
AXIN2	0	genome.wustl.edu	37	17	63532585	63532585	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	63532585	63532585	C	-	DEL	AXIN2	ENST00000307078	human	ensembl	74_37	-1	known	frame_shift_del	c.1994	p.G665fs	0.436	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN2	HGNC	ENSG00000168646				55	0	0	39	17	30.3571
ABCA10	0	genome.wustl.edu	37	17	67212448	67212448	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	67212448	67212448	A	-	DEL	ABCA10	ENST00000269081	human	ensembl	74_37	-1	known	frame_shift_del	c.582	p.F194fs	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263				389	0	0	302	54	15.1685
TMEM102	0	genome.wustl.edu	37	17	7339229	7339229	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7339229	7339229	C	-	DEL	TMEM102	ENST00000323206	human	ensembl	74_37	+1	known	frame_shift_del	c.39	p.P14fs	0.988	NULL	NULL	-	no_errors	TMEM102	HGNC	ENSG00000181284				65	0	0	34	6	15
TNFSF13	0	genome.wustl.edu	37	17	7462460	7462460	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7462460	7462460	G	-	DEL	TNFSF13	ENST00000338784	human	ensembl	74_37	+1	known	frame_shift_del	c.104	p.A37fs	1.000	NULL	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	-	no_errors	TNFSF13	HGNC	ENSG00000161955				60	0	0	46	6	11.5385
CHD3	0	genome.wustl.edu	37	17	7814810	7814812	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	7814810	7814812	GAA	-	DEL	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	in_frame_del	c.5910_5912	p.K1972in_frame_del	1.000:1.000:1.000	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				196	0	0	147	24	14.0351
CARD14	0	genome.wustl.edu	37	17	78162303	78162305	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	78162303	78162305	AGG	-	DEL	CARD14	ENST00000344227	human	ensembl	74_37	+1	known	in_frame_del	c.803_805	p.E270in_frame_del	0.999:1.000:1.000	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD,pfscan_PDZ,pfscan_Guanylate_kin-like	-	no_errors	CARD14	HGNC	ENSG00000141527				84	0	0	64	10	13.5135
TSPAN10	0	genome.wustl.edu	37	17	79612317	79612317	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	79612317	79612317	G	-	DEL	TSPAN10	ENST00000328585	human	ensembl	74_37	+1	known	frame_shift_del	c.336	p.116fs	0.002	pfam_Tetraspanin/Peripherin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN10	HGNC	ENSG00000182612				55	0	0	47	14	22.9508
ARHGEF15	0	genome.wustl.edu	37	17	8222163	8222163	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	17	8222163	8222163	C	-	DEL	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	frame_shift_del	c.1968	p.R658fs	0.960	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844				394	0	0	337	65	16.1692
RNMT	0	genome.wustl.edu	37	18	13746253	13746253	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	13746253	13746253	A	-	DEL	RNMT	ENST00000262173	human	ensembl	74_37	+1	known	frame_shift_del	c.1174	p.T394fs	1.000	pfam_mRNA_G-N7_MeTrfase_dom,pirsf_mRNA_G-N7_MeTrfase	pfam_mRNA_G-N7_MeTrfase_dom,pfam_Methyltransf_11,pirsf_mRNA_G-N7_MeTrfase	-	no_errors	RNMT	HGNC	ENSG00000101654				178	0	0	116	25	17.7305
LAMA3	0	genome.wustl.edu	37	18	21338390	21338391	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	21338390	21338391	-	G	INS	LAMA3	ENST00000313654	human	ensembl	74_37	+1	known	frame_shift_ins	c.978_979	p.E327fs	0.989:1.000	smart_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Growth_fac_rcpt_N_dom,superfamily_Galactose-bd-like,superfamily_STAT_TF_coiled-coil,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA3	HGNC	ENSG00000053747				56	0	0	36	14	28
LAMA3	0	genome.wustl.edu	37	18	21495340	21495340	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	21495340	21495340	A	-	DEL	LAMA3	ENST00000313654	human	ensembl	74_37	+1	known	frame_shift_del	c.7732	p.T2580fs	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_EGF_laminin,pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Growth_fac_rcpt_N_dom,superfamily_Galactose-bd-like,superfamily_STAT_TF_coiled-coil,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA3	HGNC	ENSG00000053747				173	0	0	125	32	20.3822
OSBPL1A	0	genome.wustl.edu	37	18	21750331	21750331	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	21750331	21750331	T	-	DEL	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	frame_shift_del	c.2378	p.N793fs	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447				281	0	0	253	66	20.6897
CXXC1	0	genome.wustl.edu	37	18	47812174	47812174	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	47812174	47812174	C	-	DEL	CXXC1	ENST00000412036	human	ensembl	74_37	-1	known	frame_shift_del	c.584	p.G195fs	1.000	pfam_Znf_CXXC,pfscan_Znf_CXXC	pfam_CpG-bd_C,pfam_Znf_CXXC,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	CXXC1	HGNC	ENSG00000154832				124	0	0	84	10	10.6383
ELAC1	0	genome.wustl.edu	37	18	48510955	48510956	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	48510955	48510956	-	T	INS	ELAC1	ENST00000591429	human	ensembl	74_37	+1	putative	frame_shift_ins	c.647_648	p.P220fs	0.007:0.006	NULL	pfam_Beta-lactamas-like	-	no_errors	ELAC1	HGNC	ENSG00000141642				64	0	0	51	10	16.3934
DYNAP	0	genome.wustl.edu	37	18	52258560	52258560	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	52258560	52258560	A	-	DEL	DYNAP	ENST00000321600	human	ensembl	74_37	+1	known	frame_shift_del	c.125	p.N43fs	0.061	NULL	NULL	-	no_errors	DYNAP	HGNC	ENSG00000178690				238	0	0	173	29	14.3564
SERPINB8	0	genome.wustl.edu	37	18	61652328	61652328	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	61652328	61652328	A	-	DEL	SERPINB8	ENST00000353706	human	ensembl	74_37	+1	known	frame_shift_del	c.569	p.K192fs	0.750	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB8	HGNC	ENSG00000166401				106	0	0	109	18	14.1732
CDH19	0	genome.wustl.edu	37	18	64178924	64178925	+	Splice_Site	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	64178924	64178925	-	A	INS	CDH19	ENST00000262150	human	ensembl	74_37	-1	known	splice_site_ins	c.1459-3_1459-2	e9-2	1.000:0.232	-	-	-	no_errors	CDH19	HGNC	ENSG00000071991				208	0	0	174	23	11.6751
LAMA1	0	genome.wustl.edu	37	18	7015794	7015794	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	18	7015794	7015794	G	-	DEL	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	frame_shift_del	c.3053	p.P1018fs	1.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				187	0	0	130	24	15.5844
ICAM4	0	genome.wustl.edu	37	19	10397719	10397719	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	10397719	10397719	T	-	DEL	ICAM4	ENST00000340992	human	ensembl	74_37	+1	known	frame_shift_del	c.31	p.L13fs	0.004	NULL	pfam_ICAM_N	-	no_errors	ICAM4	HGNC	ENSG00000105371				21	0	0	10	3	23.0769
ZNF878	0	genome.wustl.edu	37	19	12155504	12155504	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	12155504	12155504	A	-	DEL	ZNF878	ENST00000602107	human	ensembl	74_37	-1	known	frame_shift_del	c.853	p.S285fs	0.007	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF878	HGNC	ENSG00000257446				183	0	0	200	12	5.66038
GCDH	0	genome.wustl.edu	37	19	13008601	13008601	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	13008601	13008601	G	-	DEL	GCDH	ENST00000222214	human	ensembl	74_37	+1	known	frame_shift_del	c.1167	p.N392fs	0.996	pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCo_DH/oxidase_C	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	GCDH	HGNC	ENSG00000105607				156	0	0	125	16	11.3475
MED26	0	genome.wustl.edu	37	19	16686954	16686954	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	16686954	16686954	C	-	DEL	MED26	ENST00000263390	human	ensembl	74_37	-1	known	frame_shift_del	c.1687	p.V563fs	1.000	NULL	pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	MED26	HGNC	ENSG00000105085				126	0	0	98	15	13.2743
CPAMD8	0	genome.wustl.edu	37	19	17081703	17081703	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	17081703	17081703	G	-	DEL	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	frame_shift_del	c.2352	p.R785fs	0.962	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				70	0	0	48	9	15.7895
CRTC1	0	genome.wustl.edu	37	19	18887993	18887993	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	18887993	18887993	C	-	DEL	CRTC1	ENST00000338797	human	ensembl	74_37	+1	known	frame_shift_del	c.1754	p.S588fs	1.000	NULL	NULL	-	no_errors	CRTC1	HGNC	ENSG00000105662				76	0	0	34	13	27.6596
ZNF66	0	genome.wustl.edu	37	19	20988745	20988745	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	20988745	20988745	A	-	DEL	ZNF66	ENST00000344519	human	ensembl	74_37	+1	known	frame_shift_del	c.339	p.G116fs	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF66	HGNC	ENSG00000160229				79	0	0	59	15	20.2703
TMPRSS9	0	genome.wustl.edu	37	19	2422029	2422029	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	2422029	2422029	C	-	DEL	TMPRSS9	ENST00000332578	human	ensembl	74_37	+1	known	frame_shift_del	c.2230	p.S746fs	0.000	pirsf_Pept_S1A_polyserase-1	pirsf_Pept_S1A_polyserase-1,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Trypsin-like_Pept_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	TMPRSS9	HGNC	ENSG00000178297				103	0	0	76	16	17.3913
DMKN	0	genome.wustl.edu	37	19	35993771	35993771	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	35993771	35993771	G	-	DEL	DMKN	ENST00000339686	human	ensembl	74_37	-1	known	frame_shift_del	c.1152	p.S385fs	0.926	NULL	NULL	-	no_errors	DMKN	HGNC	ENSG00000161249				44	0	0	53	6	10.1695
ARHGAP33	0	genome.wustl.edu	37	19	36278635	36278635	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	36278635	36278635	C	-	DEL	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	frame_shift_del	c.3168	p.P1058fs	0.004	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777				64	0	0	43	12	21.8182
ZNF570	0	genome.wustl.edu	37	19	37975957	37975958	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	37975957	37975958	-	T	INS	ZNF570	ENST00000330173	human	ensembl	74_37	+1	known	frame_shift_ins	c.1433_1434	p.S480fs	0.987:0.983	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF570	HGNC	ENSG00000171827				170	0	0	158	40	20.202
SUPT5H	0	genome.wustl.edu	37	19	39963120	39963120	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	39963120	39963120	C	-	DEL	SUPT5H	ENST00000432763	human	ensembl	74_37	+1	known	frame_shift_del	c.2022	p.S676fs	1.000	pirsf_TF_Spt5	pfam_TF_Spt5_NGN-domain,pfam_KOW,pfam_Spt5_N,superfamily_Translation_prot_SH3-like,smart_Transcrpt_antiterm_NusG_N_dom,smart_KOW,pirsf_TF_Spt5	-	no_errors	SUPT5H	HGNC	ENSG00000196235				109	0	0	86	12	12.2449
DLL3	0	genome.wustl.edu	37	19	39998572	39998572	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	39998572	39998572	C	-	DEL	DLL3	ENST00000205143	human	ensembl	74_37	+1	known	frame_shift_del	c.1776	p.P594fs	0.000	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DLL3	HGNC	ENSG00000090932				52	0	0	77	5	6.09756
PLD3	0	genome.wustl.edu	37	19	40883965	40883965	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	40883965	40883965	G	-	DEL	PLD3	ENST00000356508	human	ensembl	74_37	+1	known	frame_shift_del	c.1358	p.G454fs	0.000	NULL	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD3	HGNC	ENSG00000105223				112	0	0	101	22	17.8862
AXL	0	genome.wustl.edu	37	19	41744385	41744385	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	41744385	41744385	C	-	DEL	AXL	ENST00000301178	human	ensembl	74_37	+1	known	frame_shift_del	c.1005	p.P337fs	0.997	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AXL	HGNC	ENSG00000167601				84	0	0	66	13	16.4557
CD79A	0	genome.wustl.edu	37	19	42383610	42383610	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	42383610	42383610	C	-	DEL	CD79A	ENST00000221972	human	ensembl	74_37	+1	known	frame_shift_del	c.385	p.R131fs	0.007	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Phos_immunorcpt_sig_ITAM,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM,pfscan_Ig-like_dom	-	no_errors	CD79A	HGNC	ENSG00000105369				13	0	0	14	6	30
CIC	0	genome.wustl.edu	37	19	42796883	42796883	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	42796883	42796883	C	-	DEL	CIC	ENST00000575354	human	ensembl	74_37	+1	known	frame_shift_del	c.3341	p.P1116fs	0.993	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				82	0	0	82	8	8.88889
TMIGD2	0	genome.wustl.edu	37	19	4298064	4298064	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	4298064	4298064	C	-	DEL	TMIGD2	ENST00000301272	human	ensembl	74_37	-1	known	frame_shift_del	c.325	p.A109fs	0.000	smart_Ig_sub,pfscan_Ig-like_dom	smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	TMIGD2	HGNC	ENSG00000167664				186	0	0	163	25	13.2979
ZNF226	0	genome.wustl.edu	37	19	44681808	44681808	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	44681808	44681808	A	-	DEL	ZNF226	ENST00000337433	human	ensembl	74_37	+1	known	frame_shift_del	c.2393	p.K800fs	0.382	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF226	HGNC	ENSG00000167380				65	0	0	45	14	23.7288
FOXA3	0	genome.wustl.edu	37	19	46375367	46375367	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	46375367	46375367	C	-	DEL	FOXA3	ENST00000302177	human	ensembl	74_37	+1	known	frame_shift_del	c.104	p.L37fs	1.000	pfam_Fork-head_N	pfam_TF_fork_head,pfam_Fork-head_N,pfam_Forkhead_box_C,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXA3	HGNC	ENSG00000170608				122	0	0	107	19	15.0794
PLEKHA4	0	genome.wustl.edu	37	19	49364680	49364681	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	49364680	49364681	-	G	INS	PLEKHA4	ENST00000263265	human	ensembl	74_37	-1	known	frame_shift_ins	c.344_343	p.R115fs	0.995:0.996	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA4	HGNC	ENSG00000105559				101	0	0	86	14	14
ATF5	0	genome.wustl.edu	37	19	50435750	50435750	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	50435750	50435750	C	-	DEL	ATF5	ENST00000423777	human	ensembl	74_37	+1	known	frame_shift_del	c.250	p.G86fs	0.995	NULL	pfam_bZIP,smart_bZIP,pfscan_bZIP	-	no_errors	ATF5	HGNC	ENSG00000169136				49	0	0	38	8	17.3913
CACNG6	0	genome.wustl.edu	37	19	54515282	54515282	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	54515282	54515282	C	-	DEL	CACNG6	ENST00000252729	human	ensembl	74_37	+1	known	frame_shift_del	c.622	p.P209fs	0.007	NULL	prints_VDCC_g6su,prints_VDCC_gsu,prints_Claudin	-	no_errors	CACNG6	HGNC	ENSG00000130433				62	0	0	52	12	18.75
KIR2DL3	0	genome.wustl.edu	37	19	55263199	55263199	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	55263199	55263199	A	-	DEL	KIR2DL3	ENST00000342376	human	ensembl	74_37	+1	known	frame_shift_del	c.814	p.N274fs	0.066	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL3	HGNC	ENSG00000243772				51	0	0	41	21	33.871
ZNF776	0	genome.wustl.edu	37	19	58264857	58264857	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	58264857	58264857	A	-	DEL	ZNF776	ENST00000317178	human	ensembl	74_37	+1	known	frame_shift_del	c.359	p.K122fs	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF776	HGNC	ENSG00000152443				129	0	0	87	22	20.1835
SH2D3A	0	genome.wustl.edu	37	19	6754965	6754965	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	6754965	6754965	G	-	DEL	SH2D3A	ENST00000245908	human	ensembl	74_37	-1	known	frame_shift_del	c.858	p.S287fs	0.003	superfamily_Ras_GEF_dom	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,prints_SH2	-	no_errors	SH2D3A	HGNC	ENSG00000125731				310	0	0	285	63	18.1034
MUC16	0	genome.wustl.edu	37	19	9000456	9000457	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	19	9000456	9000457	CT	-	DEL	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	frame_shift_del	c.40528_40527	p.R13509fs	0.000:0.000	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				131	0	0	123	7	5.38462
FHL2	0	genome.wustl.edu	37	2	106013112	106013113	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	106013112	106013113	-	A	INS	FHL2	ENST00000530340	human	ensembl	74_37	-1	known	frame_shift_ins	c.298_297	p.D99fs	0.430:0.381	NULL	NULL	-	no_errors	FHL2	HGNC	ENSG00000115641				62	0	0	31	12	27.907
ZC3H6	0	genome.wustl.edu	37	2	113060881	113060881	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	113060881	113060881	A	-	DEL	ZC3H6	ENST00000343936	human	ensembl	74_37	+1	known	frame_shift_del	c.289	p.R99fs	0.999	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H6	HGNC	ENSG00000188177				136	0	0	114	22	16.1765
ROCK2	0	genome.wustl.edu	37	2	11332385	11332385	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	11332385	11332385	T	-	DEL	ROCK2	ENST00000315872	human	ensembl	74_37	-1	known	frame_shift_del	c.4052	p.K1351fs	1.000	smart_Pleckstrin_homology,pirsf_Rho-assoc_coiled-coil_kin	pfam_Prot_kinase_dom,pfam_Rho-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_tRNA-bd_arm,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	ROCK2	HGNC	ENSG00000134318				457	0	0	346	92	21.0046
ROCK2	0	genome.wustl.edu	37	2	11389837	11389837	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	11389837	11389837	A	-	DEL	ROCK2	ENST00000315872	human	ensembl	74_37	-1	known	frame_shift_del	c.412	p.W138fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Rho-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_tRNA-bd_arm,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	ROCK2	HGNC	ENSG00000134318				287	0	0	243	58	19.2691
WDR33	0	genome.wustl.edu	37	2	128477655	128477655	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	128477655	128477655	C	-	DEL	WDR33	ENST00000322313	human	ensembl	74_37	-1	known	frame_shift_del	c.1944	p.P649fs	0.997	NULL	pfam_WD40_repeat,pfam_Collagen,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR33	HGNC	ENSG00000136709				90	0	0	49	13	20.9677
POTEJ	0	genome.wustl.edu	37	2	131414399	131414399	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	131414399	131414399	C	-	DEL	POTEJ	ENST00000409602	human	ensembl	74_37	+1	novel	frame_shift_del	c.2066	p.R691fs	1.000	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEJ	HGNC	ENSG00000222038				177	0	0	150	22	12.7907
MCM6	0	genome.wustl.edu	37	2	136610462	136610462	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	136610462	136610462	C	-	DEL	MCM6	ENST00000264156	human	ensembl	74_37	-1	known	frame_shift_del	c.1650	p.R550fs	0.926	pfam_MCM_DNA-dep_ATPase,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM6,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM6	HGNC	ENSG00000076003				158	0	0	107	23	17.6923
LRP1B	0	genome.wustl.edu	37	2	141032034	141032034	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	141032034	141032034	C	-	DEL	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	frame_shift_del	c.13101	p.H4368fs	0.016	smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				217	0	0	122	28	18.6667
KYNU	0	genome.wustl.edu	37	2	143713778	143713778	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	143713778	143713778	T	-	DEL	KYNU	ENST00000264170	human	ensembl	74_37	+1	known	frame_shift_del	c.442	p.F149fs	0.997	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,tigrfam_Kynureninase	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,tigrfam_Kynureninase	-	no_errors	KYNU	HGNC	ENSG00000115919				104	0	0	82	24	22.6415
KCNJ3	0	genome.wustl.edu	37	2	155711297	155711297	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	155711297	155711297	T	-	DEL	KCNJ3	ENST00000295101	human	ensembl	74_37	+1	known	frame_shift_del	c.978	p.P329fs	0.995	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.1,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ3	HGNC	ENSG00000162989				198	0	0	169	30	15.0754
MYCN	0	genome.wustl.edu	37	2	16082314	16082314	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	16082314	16082314	C	-	DEL	MYCN	ENST00000281043	human	ensembl	74_37	+1	known	frame_shift_del	c.128	p.P45fs	1.000	pfam_Tscrpt_reg_Myc_N,prints_Tscrpt_reg_Myc	pfam_Tscrpt_reg_Myc_N,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom,prints_Tscrpt_reg_Myc	-	no_errors	MYCN	HGNC	ENSG00000134323				33	0	0	37	3	7.5
COBLL1	0	genome.wustl.edu	37	2	165578962	165578962	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	165578962	165578962	A	-	DEL	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	frame_shift_del	c.930	p.Q311fs	0.999	pfam_Cordon-bleu_ubiquitin_domain	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438				202	0	0	127	25	16.4474
NOSTRIN	0	genome.wustl.edu	37	2	169699563	169699563	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	169699563	169699563	A	-	DEL	NOSTRIN	ENST00000444448	human	ensembl	74_37	+1	known	frame_shift_del	c.566	p.N191fs	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_FCH_dom,superfamily_SH3_domain,superfamily_HR1_rho-bd,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	NOSTRIN	HGNC	ENSG00000163072				112	0	0	87	29	25
LRP2	0	genome.wustl.edu	37	2	170127462	170127462	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	170127462	170127462	A	-	DEL	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	frame_shift_del	c.2272	p.S758fs	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				118	0	0	84	14	14.2857
PPIG	0	genome.wustl.edu	37	2	170460581	170460581	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	170460581	170460581	T	-	DEL	PPIG	ENST00000260970	human	ensembl	74_37	+1	known	frame_shift_del	c.30	p.F12fs	1.000	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIG	HGNC	ENSG00000138398				165	0	0	138	31	18.3432
ITGA6	0	genome.wustl.edu	37	2	173335733	173335733	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	173335733	173335733	T	-	DEL	ITGA6	ENST00000264106	human	ensembl	74_37	+1	known	frame_shift_del	c.675	p.F227fs	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA6	HGNC	ENSG00000091409				184	0	0	158	23	12.7072
ATF2	0	genome.wustl.edu	37	2	175982979	175982979	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	175982979	175982979	T	-	DEL	ATF2	ENST00000264110	human	ensembl	74_37	-1	known	frame_shift_del	c.318	p.M107fs	1.000	pirsf_TF_cAMP-dep	pfam_bZIP,smart_bZIP,pirsf_TF_cAMP-dep,pfscan_Znf_C2H2,pfscan_bZIP	-	no_errors	ATF2	HGNC	ENSG00000115966				84	0	0	60	11	15.493
TTN	0	genome.wustl.edu	37	2	179424814	179424814	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	179424814	179424814	G	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.78341	p.P26114fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				127	0	0	85	20	19.0476
BMPR2	0	genome.wustl.edu	37	2	203384859	203384859	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	203384859	203384859	C	-	DEL	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	frame_shift_del	c.902	p.S301fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217				114	0	0	91	17	15.7407
PARD3B	0	genome.wustl.edu	37	2	206166298	206166298	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	206166298	206166298	A	-	DEL	PARD3B	ENST00000406610	human	ensembl	74_37	+1	known	frame_shift_del	c.2503	p.T837fs	0.996	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3B	HGNC	ENSG00000116117				141	0	0	115	22	16.0584
PSMD1	0	genome.wustl.edu	37	2	231931680	231931680	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	231931680	231931680	A	-	DEL	PSMD1	ENST00000308696	human	ensembl	74_37	+1	known	frame_shift_del	c.365	p.K124fs	1.000	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	-	no_errors	PSMD1	HGNC	ENSG00000173692				67	0	0	48	7	12.7273
PTMA	0	genome.wustl.edu	37	2	232576065	232576067	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	232576065	232576067	AGG	-	DEL	PTMA	ENST00000341369	human	ensembl	74_37	+1	known	in_frame_del	c.53_55	p.E19in_frame_del	1.000:1.000:1.000	pfam_Pro/parathymosin	pfam_Pro/parathymosin	-	no_errors	PTMA	HGNC	ENSG00000187514				99	0	0	94	23	19.6581
USP40	0	genome.wustl.edu	37	2	234394237	234394237	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	234394237	234394237	T	-	DEL	USP40	ENST00000450966	human	ensembl	74_37	-1	known	frame_shift_del	c.3477	p.K1159fs	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP40	HGNC	ENSG00000085982				85	0	0	50	13	20.6349
TRPM8	0	genome.wustl.edu	37	2	234858731	234858731	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	234858731	234858731	T	-	DEL	TRPM8	ENST00000324695	human	ensembl	74_37	+1	known	frame_shift_del	c.1081	p.L362fs	0.993	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM8	HGNC	ENSG00000144481				66	0	0	59	7	10.6061
GPR113	0	genome.wustl.edu	37	2	26534413	26534413	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	26534413	26534413	C	-	DEL	GPR113	ENST00000333478	human	ensembl	74_37	-1	known	frame_shift_del	c.1586	p.G529fs	0.991	pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR113	HGNC	ENSG00000173567				124	0	0	80	16	16.6667
AGBL5	0	genome.wustl.edu	37	2	27278901	27278901	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	27278901	27278901	C	-	DEL	AGBL5	ENST00000360131	human	ensembl	74_37	+1	known	frame_shift_del	c.1260	p.K423fs	1.000	NULL	pfam_Peptidase_M14	-	no_errors	AGBL5	HGNC	ENSG00000084693				314	0	0	249	70	21.9436
ALK	0	genome.wustl.edu	37	2	29416400	29416400	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	29416400	29416400	T	-	DEL	ALK	ENST00000389048	human	ensembl	74_37	-1	known	frame_shift_del	c.4553	p.K1518fs	0.979	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_MAM_dom,superfamily_Kinase-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_MAM_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ALK	HGNC	ENSG00000171094				332	0	0	250	52	17.2185
THADA	0	genome.wustl.edu	37	2	43625164	43625164	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	43625164	43625164	G	-	DEL	THADA	ENST00000405006	human	ensembl	74_37	-1	known	frame_shift_del	c.4173	p.S1392fs	0.026	superfamily_ARM-type_fold	pfam_DUF2428_death-receptor-like,superfamily_ARM-type_fold	-	no_errors	THADA	HGNC	ENSG00000115970				215	0	0	130	36	21.6867
PPM1B	0	genome.wustl.edu	37	2	44428501	44428501	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	44428501	44428501	T	-	DEL	PPM1B	ENST00000282412	human	ensembl	74_37	+1	known	frame_shift_del	c.163	p.F56fs	0.999	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,pfam_PP2C_C,superfamily_PP2C-like_dom,superfamily_PP2C_C,smart_PP2C-like_dom	-	no_errors	PPM1B	HGNC	ENSG00000138032				339	0	0	231	64	21.6949
PSME4	0	genome.wustl.edu	37	2	54093345	54093345	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	54093345	54093345	T	-	DEL	PSME4	ENST00000404125	human	ensembl	74_37	-1	known	frame_shift_del	c.5413	p.T1805fs	1.000	pfam_DUF3437,superfamily_ARM-type_fold	pfam_DUF3437,superfamily_ARM-type_fold	-	no_errors	PSME4	HGNC	ENSG00000068878				316	0	0	226	37	14.0684
BCL11A	0	genome.wustl.edu	37	2	60689254	60689254	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	60689254	60689254	G	-	DEL	BCL11A	ENST00000335712	human	ensembl	74_37	-1	known	frame_shift_del	c.793	p.L265fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11A	HGNC	ENSG00000119866				89	0	0	81	18	18.1818
EHBP1	0	genome.wustl.edu	37	2	63176136	63176136	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	63176136	63176136	A	-	DEL	EHBP1	ENST00000263991	human	ensembl	74_37	+1	known	frame_shift_del	c.2260	p.T756fs	0.401	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	EHBP1	HGNC	ENSG00000115504				149	0	0	116	33	22.1477
WDPCP	0	genome.wustl.edu	37	2	63664576	63664576	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	63664576	63664576	T	-	DEL	WDPCP	ENST00000272321	human	ensembl	74_37	-1	known	frame_shift_del	c.612	p.K204fs	1.000	pfam_DUF3312	pfam_DUF3312,superfamily_WD40_repeat_dom	-	no_errors	WDPCP	HGNC	ENSG00000143951				99	0	0	75	18	19.3548
CD207	0	genome.wustl.edu	37	2	71060135	71060136	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	71060135	71060136	-	C	INS	CD207	ENST00000410009	human	ensembl	74_37	-1	known	frame_shift_ins	c.613_612	p.N204fs	0.879:0.799	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CD207	HGNC	ENSG00000116031				101	0	0	83	17	17
MCEE	0	genome.wustl.edu	37	2	71337212	71337212	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	71337212	71337212	T	-	DEL	MCEE	ENST00000244217	human	ensembl	74_37	-1	known	frame_shift_del	c.419	p.K140fs	1.000	pfam_Glyas_Fos-R_dOase_dom,tigrfam_MeMalonyl-CoA_epimerase	pfam_Glyas_Fos-R_dOase_dom,tigrfam_MeMalonyl-CoA_epimerase	-	no_errors	MCEE	HGNC	ENSG00000124370				114	0	0	98	25	20.3252
MRPS5	0	genome.wustl.edu	37	2	95753233	95753233	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	95753233	95753233	G	-	DEL	MRPS5	ENST00000272418	human	ensembl	74_37	-1	known	frame_shift_del	c.1162	p.R388fs	0.000	NULL	pfam_Ribosomal_S5_C,pfam_Ribosomal_S5_N,superfamily_Ribosomal_S5_D2-typ_fold,pfscan_Ribosomal_S5_N	-	no_errors	MRPS5	HGNC	ENSG00000144029				128	0	0	79	11	12.2222
NCAPH	0	genome.wustl.edu	37	2	97008988	97008988	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	2	97008988	97008988	G	-	DEL	NCAPH	ENST00000240423	human	ensembl	74_37	+1	known	frame_shift_del	c.541	p.L183fs	1.000	pfam_Condensin_barren_su2,pirsf_Condensin_barren_su2	pfam_Condensin_barren_su2,pirsf_Condensin_barren_su2	-	no_errors	NCAPH	HGNC	ENSG00000121152				96	0	0	70	17	19.5402
SPTLC3	0	genome.wustl.edu	37	20	13140674	13140675	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	13140674	13140675	-	A	INS	SPTLC3	ENST00000399002	human	ensembl	74_37	+1	known	frame_shift_ins	c.1440_1441	p.I482fs	0.816:0.978	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	SPTLC3	HGNC	ENSG00000172296				239	0	0	129	27	17.3077
DEFB129	0	genome.wustl.edu	37	20	210188	210188	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	210188	210188	T	-	DEL	DEFB129	ENST00000246105	human	ensembl	74_37	+1	known	frame_shift_del	c.328	p.F111fs	0.000	NULL	NULL	-	no_errors	DEFB129	HGNC	ENSG00000125903				206	0	0	148	34	18.6813
VSX1	0	genome.wustl.edu	37	20	25059455	25059455	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	25059455	25059455	C	-	DEL	VSX1	ENST00000376707	human	ensembl	74_37	-1	known	frame_shift_del	c.637	p.V213fs	0.001	smart_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	VSX1	HGNC	ENSG00000100987				318	0	0	206	42	16.9355
NCOA6	0	genome.wustl.edu	37	20	33331070	33331070	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	33331070	33331070	G	-	DEL	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	frame_shift_del	c.2990	p.P997fs	0.999	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646				85	0	0	72	7	8.86076
MYH7B	0	genome.wustl.edu	37	20	33582173	33582175	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	33582173	33582175	AGA	-	DEL	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	in_frame_del	c.2795_2797	p.K933in_frame_del	1.000:1.000:1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814				43	0	0	22	7	24.1379
SRC	0	genome.wustl.edu	37	20	36022344	36022344	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	36022344	36022344	G	-	DEL	SRC	ENST00000360723	human	ensembl	74_37	+1	known	frame_shift_del	c.415	p.G139fs	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	SRC	HGNC	ENSG00000197122				24	0	0	21	7	25
SGK2	0	genome.wustl.edu	37	20	42195105	42195105	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	42195105	42195105	C	-	DEL	SGK2	ENST00000341458	human	ensembl	74_37	+1	known	frame_shift_del	c.150	p.P52fs	0.244	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	SGK2	HGNC	ENSG00000101049				179	0	0	98	17	14.7826
PIGT	0	genome.wustl.edu	37	20	44050026	44050026	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	44050026	44050026	C	-	DEL	PIGT	ENST00000279036	human	ensembl	74_37	+1	known	frame_shift_del	c.1037	p.P348fs	0.666	pfam_PIG-T	pfam_PIG-T	-	no_errors	PIGT	HGNC	ENSG00000124155				58	0	0	36	9	20
CTSA	0	genome.wustl.edu	37	20	44523668	44523668	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	44523668	44523668	C	-	DEL	CTSA	ENST00000372484	human	ensembl	74_37	+1	known	frame_shift_del	c.1038	p.C349fs	1.000	pfam_Peptidase_S10	pfam_Peptidase_S10,prints_Peptidase_S10	-	no_errors	CTSA	HGNC	ENSG00000064601				61	0	0	38	7	15.5556
SLC12A5	0	genome.wustl.edu	37	20	44673727	44673727	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	44673727	44673727	C	-	DEL	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	frame_shift_del	c.1586	p.P530fs	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140				201	0	0	135	20	12.9032
KCNB1	0	genome.wustl.edu	37	20	47989891	47989891	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	47989891	47989891	G	-	DEL	KCNB1	ENST00000371741	human	ensembl	74_37	-1	known	frame_shift_del	c.2206	p.R736fs	1.000	prints_K_chnl_volt-dep_Kv2.1	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.1,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB1	HGNC	ENSG00000158445				245	0	0	163	25	13.2979
CBLN4	0	genome.wustl.edu	37	20	54579052	54579052	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	54579052	54579052	G	-	DEL	CBLN4	ENST00000064571	human	ensembl	74_37	-1	known	frame_shift_del	c.176	p.P59fs	1.000	NULL	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN4	HGNC	ENSG00000054803				167	0	0	101	14	12.1739
C20orf85	0	genome.wustl.edu	37	20	56735727	56735727	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	56735727	56735727	C	-	DEL	C20orf85	ENST00000371168	human	ensembl	74_37	+1	known	frame_shift_del	c.263	p.P90fs	0.687	NULL	NULL	-	no_errors	C20orf85	HGNC	ENSG00000124237				56	0	0	44	10	18.5185
NPEPL1	0	genome.wustl.edu	37	20	57290340	57290340	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	57290340	57290340	G	-	DEL	NPEPL1	ENST00000356091	human	ensembl	74_37	+1	known	frame_shift_del	c.1530	p.D512fs	0.131	NULL	pfam_Peptidase_M17_C,prints_Leucine_aapep/pepB	-	no_errors	NPEPL1	HGNC	ENSG00000215440				22	0	0	9	6	40
NELFCD	0	genome.wustl.edu	37	20	57564987	57564987	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	20	57564987	57564987	G	-	DEL	NELFCD	ENST00000602795	human	ensembl	74_37	+1	known	frame_shift_del	c.786	p.G264fs	0.965	pfam_TH1	pfam_TH1	-	no_errors	NELFCD	HGNC	ENSG00000101158				113	0	0	62	16	20.5128
DOPEY2	0	genome.wustl.edu	37	21	37605286	37605286	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	37605286	37605286	T	-	DEL	DOPEY2	ENST00000399151	human	ensembl	74_37	+1	known	frame_shift_del	c.2535	p.F847fs	0.000	NULL	pfam_Dopey_N	-	no_errors	DOPEY2	HGNC	ENSG00000142197				195	0	0	162	45	21.7391
UBASH3A	0	genome.wustl.edu	37	21	43864692	43864692	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	43864692	43864692	C	-	DEL	UBASH3A	ENST00000319294	human	ensembl	74_37	+1	known	frame_shift_del	c.1787	p.T596fs	0.974	NULL	pfam_His_Pase_superF_clade-1,pfam_SH3_domain,superfamily_SH3_domain,superfamily_UBA-like,smart_SH3_domain,pfscan_SH3_domain,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBASH3A	HGNC	ENSG00000160185				255	0	0	193	17	8.09524
TRAPPC10	0	genome.wustl.edu	37	21	45504083	45504083	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	45504083	45504083	C	-	DEL	TRAPPC10	ENST00000291574	human	ensembl	74_37	+1	known	frame_shift_del	c.2319	p.I775fs	1.000	NULL	NULL	-	no_errors	TRAPPC10	HGNC	ENSG00000160218				56	0	0	53	10	15.873
KRTAP10-5	0	genome.wustl.edu	37	21	45999955	45999955	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	45999955	45999955	G	-	DEL	KRTAP10-5	ENST00000400372	human	ensembl	74_37	-1	known	frame_shift_del	c.501	p.C168fs	0.068	NULL	NULL	-	no_errors	KRTAP10-5	HGNC	ENSG00000241123				260	0	0	233	58	19.9313
COL18A1	0	genome.wustl.edu	37	21	46888199	46888199	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	46888199	46888199	C	-	DEL	COL18A1	ENST00000359759	human	ensembl	74_37	+1	known	frame_shift_del	c.1395	p.P467fs	0.997	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagenase_NC10/endostatin,pfam_DUF959_COL18_N,pfam_Collagen,pfam_Frizzled_dom,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,superfamily_Frizzled_dom,smart_Frizzled_dom,smart_Laminin_G,pfscan_Frizzled_dom	-	no_errors	COL18A1	HGNC	ENSG00000182871				80	0	0	52	9	14.7541
COL18A1	0	genome.wustl.edu	37	21	46900038	46900038	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	46900038	46900038	C	-	DEL	COL18A1	ENST00000359759	human	ensembl	74_37	+1	known	frame_shift_del	c.2611	p.P872fs	0.912	NULL	pfam_Collagenase_NC10/endostatin,pfam_DUF959_COL18_N,pfam_Collagen,pfam_Frizzled_dom,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,superfamily_Frizzled_dom,smart_Frizzled_dom,smart_Laminin_G,pfscan_Frizzled_dom	-	no_errors	COL18A1	HGNC	ENSG00000182871				45	0	0	33	6	15.3846
PCNT	0	genome.wustl.edu	37	21	47754333	47754334	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	21	47754333	47754334	AG	-	DEL	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	frame_shift_del	c.290_291	p.E99fs	0.011:0.008	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299				131	0	0	97	21	17.7966
MTMR3	0	genome.wustl.edu	37	22	30415990	30415991	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	30415990	30415991	-	C	INS	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	frame_shift_ins	c.2342_2343	p.R784fs	0.003:0.000	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330				219	0	0	192	36	15.7895
PRR14L	0	genome.wustl.edu	37	22	32108311	32108311	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	32108311	32108311	T	-	DEL	PRR14L	ENST00000397493	human	ensembl	74_37	-1	known	frame_shift_del	c.5514	p.K1838fs	1.000	NULL	NULL	-	no_errors	PRR14L	HGNC	ENSG00000183530				87	0	0	78	14	15.2174
RANGAP1	0	genome.wustl.edu	37	22	41650427	41650429	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	41650427	41650429	TCC	-	DEL	RANGAP1	ENST00000356244	human	ensembl	74_37	-1	known	in_frame_del	c.1145_1143	p.E382in_frame_del	0.125:0.126:0.055	NULL	pfam_Ran_GTPase_activating_1_C,superfamily_Ran_GTPase_activating_1_C,smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	RANGAP1	HGNC	ENSG00000100401				107	0	0	69	13	15.8537
TCF20	0	genome.wustl.edu	37	22	42564716	42564717	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	42564716	42564717	GG	-	DEL	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	frame_shift_del	c.5826_5825	p.P1942fs	1.000:1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207				36	0	0	31	6	16.2162
ARFGAP3	0	genome.wustl.edu	37	22	43218401	43218401	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	43218401	43218401	T	-	DEL	ARFGAP3	ENST00000263245	human	ensembl	74_37	-1	known	frame_shift_del	c.687	p.G230fs	1.000	NULL	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ARFGAP3	HGNC	ENSG00000242247				310	0	0	275	54	16.4134
TBC1D22A	0	genome.wustl.edu	37	22	47188444	47188444	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	47188444	47188444	C	-	DEL	TBC1D22A	ENST00000337137	human	ensembl	74_37	+1	known	frame_shift_del	c.90	p.F33fs	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D22A	HGNC	ENSG00000054611				164	0	0	125	34	21.3836
ZBED4	0	genome.wustl.edu	37	22	50279276	50279276	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	50279276	50279276	A	-	DEL	ZBED4	ENST00000216268	human	ensembl	74_37	+1	known	frame_shift_del	c.1966	p.I658fs	1.000	NULL	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED4	HGNC	ENSG00000100426				142	0	0	106	25	19.084
NCAPH2	0	genome.wustl.edu	37	22	50961502	50961502	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	22	50961502	50961502	C	-	DEL	NCAPH2	ENST00000299821	human	ensembl	74_37	+1	known	frame_shift_del	c.1587	p.Q531fs	0.762	pfam_Condensin_II_H2-like	pfam_Condensin_II_H2-like	-	no_errors	NCAPH2	HGNC	ENSG00000025770				46	0	0	22	5	18.5185
SEC13	0	genome.wustl.edu	37	3	10357003	10357004	+	Splice_Site	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	10357003	10357004	-	C	INS	SEC13	ENST00000350697	human	ensembl	74_37	-1	known	splice_site_ins	c.164+1_164+1	e3+1	1.000:1.000	-	-	-	no_errors	SEC13	HGNC	ENSG00000157020				57	0	0	41	19	31.6667
SLC9C1	0	genome.wustl.edu	37	3	111923223	111923223	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	111923223	111923223	A	-	DEL	SLC9C1	ENST00000305815	human	ensembl	74_37	-1	known	frame_shift_del	c.2014	p.S672fs	0.503	NULL	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C1	HGNC	ENSG00000172139				314	0	0	253	49	16.2252
ZBTB20	0	genome.wustl.edu	37	3	114058003	114058003	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	114058003	114058003	G	-	DEL	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	frame_shift_del	c.2075	p.P692fs	0.678	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				124	0	0	98	18	15.5172
TPRA1	0	genome.wustl.edu	37	3	127294786	127294788	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	127294786	127294788	GAA	-	DEL	TPRA1	ENST00000355552	human	ensembl	74_37	-1	known	in_frame_del	c.606_604	p.F202in_frame_del	1.000:1.000:1.000	pfam_Uncharacterised_TM-40	pfam_Uncharacterised_TM-40	-	no_errors	TPRA1	HGNC	ENSG00000163870				64	0	0	37	6	13.9535
CNTN6	0	genome.wustl.edu	37	3	1371501	1371501	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	1371501	1371501	A	-	DEL	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	frame_shift_del	c.1246	p.K418fs	0.992	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115				185	0	0	145	56	27.8607
FAIM	0	genome.wustl.edu	37	3	138340266	138340266	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	138340266	138340266	A	-	DEL	FAIM	ENST00000338446	human	ensembl	74_37	+1	known	frame_shift_del	c.98	p.M35fs	0.997	pfam_FAIM	pfam_FAIM	-	no_errors	FAIM	HGNC	ENSG00000158234				212	0	0	157	47	23.0392
EIF2A	0	genome.wustl.edu	37	3	150289746	150289746	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	150289746	150289746	A	-	DEL	EIF2A	ENST00000460851	human	ensembl	74_37	+1	known	frame_shift_del	c.813	p.N273fs	0.958	pfam_TIF_beta_prop-like,pirsf_TIF2A	pfam_TIF_beta_prop-like,pirsf_TIF2A	-	no_errors	EIF2A	HGNC	ENSG00000144895				84	0	0	81	7	7.95455
NR2C2	0	genome.wustl.edu	37	3	15084406	15084406	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	15084406	15084406	T	-	DEL	NR2C2	ENST00000323373	human	ensembl	74_37	+1	known	frame_shift_del	c.1739	p.F582fs	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt	-	no_errors	NR2C2	HGNC	ENSG00000177463				73	0	0	81	7	7.95455
ANKRD28	0	genome.wustl.edu	37	3	15756165	15756166	+	Splice_Site	INS	-	-	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	15756165	15756166	-	G	INS	ANKRD28	ENST00000383777	human	ensembl	74_37	-1	known	splice_site_ins	c.1006-3_1006-2	e9-2	1.000:0.998	-	-	-	no_errors	ANKRD28	HGNC	ENSG00000206560				42	0	0	37	13	26
SLITRK3	0	genome.wustl.edu	37	3	164906625	164906625	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	164906625	164906625	A	-	DEL	SLITRK3	ENST00000241274	human	ensembl	74_37	-1	known	frame_shift_del	c.1994	p.F665fs	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK3	HGNC	ENSG00000121871				53	0	0	29	15	34.0909
FNDC3B	0	genome.wustl.edu	37	3	172096209	172096210	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	172096209	172096210	-	C	INS	FNDC3B	ENST00000336824	human	ensembl	74_37	+1	known	frame_shift_ins	c.3158_3159	p.T1056fs	0.971:0.958	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3B	HGNC	ENSG00000075420				92	0	0	81	10	10.989
ATP11B	0	genome.wustl.edu	37	3	182602674	182602674	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	182602674	182602674	T	-	DEL	ATP11B	ENST00000323116	human	ensembl	74_37	+1	known	frame_shift_del	c.2643	p.Y884fs	1.000	tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11B	HGNC	ENSG00000058063				156	0	0	155	14	8.28402
KCNH8	0	genome.wustl.edu	37	3	19554727	19554728	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	19554727	19554728	-	C	INS	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	frame_shift_ins	c.2345_2346	p.N785fs	0.511:0.020	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960				147	0	0	160	14	8.04598
SDHAP1	0	genome.wustl.edu	37	3	195709193	195709193	+	RNA	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	195709193	195709193	A	-	DEL	SDHAP1	ENST00000413474	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.759	-	-	-	no_errors	SDHAP1	HGNC	ENSG00000185485				103	0	0	111	9	7.5
HMGB1P5	0	genome.wustl.edu	37	3	22423968	22423968	+	RNA	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	22423968	22423968	T	-	DEL	HMGB1P5	ENST00000451497	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HMGB1P5	HGNC	ENSG00000132967				66	0	0	53	17	24.2857
MLH1	0	genome.wustl.edu	37	3	37053550	37053550	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	37053550	37053550	G	-	DEL	MLH1	ENST00000231790	human	ensembl	74_37	+1	known	frame_shift_del	c.637	p.V213fs	0.999	superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_DNA_mismatch_repair_N	pfam_DNA_mismatch_repair_C,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_DNA_mismatch_repair_N	-	no_errors	MLH1	HGNC	ENSG00000076242				223	0	0	116	54	31.7647
SCN11A	0	genome.wustl.edu	37	3	38949543	38949543	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	38949543	38949543	T	-	DEL	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	frame_shift_del	c.1370	p.K457fs	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356				235	0	0	142	96	40.3361
COL7A1	0	genome.wustl.edu	37	3	48602622	48602622	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	48602622	48602622	G	-	DEL	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	frame_shift_del	c.8540	p.P2847fs	0.986	NULL	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270				46	0	0	40	21	34.4262
AMT	0	genome.wustl.edu	37	3	49456495	49456495	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	49456495	49456495	G	-	DEL	AMT	ENST00000273588	human	ensembl	74_37	-1	known	frame_shift_del	c.786	p.D262fs	1.000	pfam_GCV_T_N,pirsf_GcvT,tigrfam_GcvT	pfam_GCV_T_N,pfam_GCV_T_C,pirsf_GcvT,tigrfam_GcvT	-	no_errors	AMT	HGNC	ENSG00000145020				67	0	0	39	6	13.3333
GLYCTK	0	genome.wustl.edu	37	3	52325906	52325906	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	52325906	52325906	G	-	DEL	GLYCTK	ENST00000436784	human	ensembl	74_37	+1	known	frame_shift_del	c.673	p.L227fs	1.000	NULL	pfam_MOFRL	-	no_errors	GLYCTK	HGNC	ENSG00000168237				133	0	0	104	9	7.9646
SUCLG2	0	genome.wustl.edu	37	3	67570954	67570955	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	3	67570954	67570955	-	C	INS	SUCLG2	ENST00000307227	human	ensembl	74_37	-1	known	frame_shift_ins	c.522_521	p.V175fs	0.018:1.000	pfam_ATP-grasp_succ-CoA_synth-type,tigrfam_Succ_CoA_synthase_bsu	pfam_ATP-grasp_succ-CoA_synth-type,pfam_CoA_ligase,superfamily_Succinyl-CoA_synth-like,tigrfam_Succ_CoA_synthase_bsu	-	no_errors	SUCLG2	HGNC	ENSG00000172340				205	0	0	151	26	14.6893
TET2	0	genome.wustl.edu	37	4	106157548	106157549	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	106157548	106157549	-	C	INS	TET2	ENST00000380013	human	ensembl	74_37	+1	known	frame_shift_ins	c.2449_2450	p.Y819fs	0.003:0.003	NULL	NULL	-	no_errors	TET2	HGNC	ENSG00000168769				126	0	0	106	29	21.4815
BBS12	0	genome.wustl.edu	37	4	123663971	123663972	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	123663971	123663972	TA	-	DEL	BBS12	ENST00000314218	human	ensembl	74_37	+1	known	frame_shift_del	c.924_925	p.M309fs	0.000:0.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	-	no_errors	BBS12	HGNC	ENSG00000181004				112	0	0	104	34	24.6377
PHF17	0	genome.wustl.edu	37	4	129783017	129783017	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	129783017	129783017	G	-	DEL	PHF17	ENST00000226319	human	ensembl	74_37	+1	known	frame_shift_del	c.1140	p.A382fs	0.057	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF17	HGNC	ENSG00000077684				162	0	0	120	18	13.0435
SCOC	0	genome.wustl.edu	37	4	141264811	141264813	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	141264811	141264813	GAG	-	DEL	SCOC	ENST00000338517	human	ensembl	74_37	+1	known	in_frame_del	c.19_21	p.E10in_frame_del	0.996:0.996:0.998	NULL	pfam_DUF2205_coiled-coil	-	no_errors	SCOC	HGNC	ENSG00000153130				70	0	0	45	6	11.7647
HHIP	0	genome.wustl.edu	37	4	145655985	145655985	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	145655985	145655985	C	-	DEL	HHIP	ENST00000296575	human	ensembl	74_37	+1	known	frame_shift_del	c.1853	p.T620fs	1.000	smart_EG-like_dom	pfam_Folate_rcpt-like,superfamily_Quinoprot_gluc/sorb_DH,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HHIP	HGNC	ENSG00000164161				109	0	0	78	18	18.75
PET112	0	genome.wustl.edu	37	4	152679951	152679951	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	152679951	152679951	A	-	DEL	PET112	ENST00000263985	human	ensembl	74_37	-1	known	frame_shift_del	c.300	p.F100fs	1.000	pfam_Asn/Gln-tRNA_Trfase_suB/E_cat,tigrfam_Apn/Gln-ADT_bsu	pfam_Asn/Gln-tRNA_Trfase_suB/E_cat,pfam_Asn/Gln_amidotransferase,superfamily_Asn/Gln_tRNA_amidoTrfrase-rel,smart_Asn/Gln_amidotransferase,tigrfam_Apn/Gln-ADT_bsu	-	no_errors	PET112	HGNC	ENSG00000059691				206	0	0	148	41	21.6931
SFRP2	0	genome.wustl.edu	37	4	154709525	154709525	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	154709525	154709525	G	-	DEL	SFRP2	ENST00000274063	human	ensembl	74_37	-1	known	frame_shift_del	c.463	p.L155fs	1.000	superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled_dom,pfam_Netrin_module_non-TIMP,superfamily_Frizzled_dom,superfamily_TIMP-like_OB-fold,smart_Frizzled_dom,smart_Netrin_module_non-TIMP,pfscan_Frizzled_dom,pfscan_Netrin_domain	-	no_errors	SFRP2	HGNC	ENSG00000145423				96	0	0	65	22	25.2874
CC2D2A	0	genome.wustl.edu	37	4	15601156	15601157	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	15601156	15601157	-	A	INS	CC2D2A	ENST00000413206	human	ensembl	74_37	+1	known	frame_shift_ins	c.4501_4502	p.I1503fs	1.000:1.000	NULL	superfamily_C2_dom,smart_C2_dom	-	no_errors	CC2D2A	HGNC	ENSG00000048342				30	0	0	21	7	25
TDO2	0	genome.wustl.edu	37	4	156824926	156824926	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	156824926	156824926	T	-	DEL	TDO2	ENST00000536354	human	ensembl	74_37	+1	known	frame_shift_del	c.16	p.L7fs	0.100	NULL	pfam_Trp_2_3_dOase	-	no_errors	TDO2	HGNC	ENSG00000151790				214	0	0	161	39	19.5
SH3RF1	0	genome.wustl.edu	37	4	170057551	170057551	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	170057551	170057551	G	-	DEL	SH3RF1	ENST00000284637	human	ensembl	74_37	-1	known	frame_shift_del	c.986	p.P329fs	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Znf_C3HC4_RING-type,superfamily_SH3_domain,smart_Znf_RING,smart_SH3_domain,pfscan_SH3_domain,pfscan_Znf_RING,prints_p67phox,prints_SH3_domain	-	no_errors	SH3RF1	HGNC	ENSG00000154447				327	0	0	279	53	15.9639
GPR125	0	genome.wustl.edu	37	4	22394224	22394224	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	22394224	22394224	T	-	DEL	GPR125	ENST00000334304	human	ensembl	74_37	-1	known	frame_shift_del	c.2571	p.A858fs	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_GPCR_2_extracellular_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR125	HGNC	ENSG00000152990				215	0	0	152	37	19.5767
HTT	0	genome.wustl.edu	37	4	3237477	3237477	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	3237477	3237477	G	-	DEL	HTT	ENST00000355072	human	ensembl	74_37	+1	known	frame_shift_del	c.8757	p.G2920fs	1.000	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386				50	0	0	22	8	26.6667
TLR1	0	genome.wustl.edu	37	4	38798148	38798148	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	38798148	38798148	A	-	DEL	TLR1	ENST00000308979	human	ensembl	74_37	-1	known	frame_shift_del	c.2305	p.W769fs	1.000	pirsf_Toll-like_receptor,pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR1	HGNC	ENSG00000174125				134	0	0	82	32	28.0702
MFSD7	0	genome.wustl.edu	37	4	678571	678571	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	678571	678571	G	-	DEL	MFSD7	ENST00000404286	human	ensembl	74_37	-1	known	frame_shift_del	c.660	p.T221fs	0.983	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD7	HGNC	ENSG00000169026				36	0	0	31	6	16.2162
UGT2B17	0	genome.wustl.edu	37	4	69433933	69433933	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	69433933	69433933	A	-	DEL	UGT2B17	ENST00000317746	human	ensembl	74_37	-1	known	frame_shift_del	c.270	p.F90fs	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B17	HGNC	ENSG00000197888				236	0	0	195	56	22.3108
MOB1B	0	genome.wustl.edu	37	4	71844995	71844995	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	71844995	71844995	T	-	DEL	MOB1B	ENST00000309395	human	ensembl	74_37	+1	known	frame_shift_del	c.560	p.F189fs	1.000	pfam_Mob1_phocein,superfamily_Mob1_phocein	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB1B	HGNC	ENSG00000173542				232	0	0	209	45	17.7165
CPLX1	0	genome.wustl.edu	37	4	786350	786352	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	786350	786352	CTT	-	DEL	CPLX1	ENST00000304062	human	ensembl	74_37	-1	known	in_frame_del	c.78_76	p.K26in_frame_del	1.000:1.000:1.000	pfam_Synaphin	pfam_Synaphin	-	no_errors	CPLX1	HGNC	ENSG00000168993				86	0	0	68	16	19.0476
GAK	0	genome.wustl.edu	37	4	887700	887700	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	887700	887700	G	-	DEL	GAK	ENST00000314167	human	ensembl	74_37	-1	known	frame_shift_del	c.839	p.P280fs	0.001	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_Kinase-like_dom,superfamily_DnaJ_domain,superfamily_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_DnaJ_domain,pfscan_Prot_kinase_dom,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	GAK	HGNC	ENSG00000178950				59	0	0	43	4	8.51064
SMARCAD1	0	genome.wustl.edu	37	4	95173909	95173910	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	4	95173909	95173910	-	A	INS	SMARCAD1	ENST00000359052	human	ensembl	74_37	+1	known	frame_shift_ins	c.1032_1033	p.N346fs	0.996:1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_UBA-like,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_CUE,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAD1	HGNC	ENSG00000163104				86	0	0	65	20	23.5294
SLCO6A1	0	genome.wustl.edu	37	5	101748695	101748695	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	101748695	101748695	T	-	DEL	SLCO6A1	ENST00000379807	human	ensembl	74_37	-1	known	frame_shift_del	c.1625	p.K542fs	0.982	pfam_OA_transporter,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO6A1	HGNC	ENSG00000205359				32	0	0	19	7	26.9231
NUDT12	0	genome.wustl.edu	37	5	102895013	102895013	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	102895013	102895013	A	-	DEL	NUDT12	ENST00000230792	human	ensembl	74_37	-1	known	frame_shift_del	c.363	p.F121fs	1.000	NULL	pfam_NUDIX_hydrolase_dom,pfam_Ankyrin_rpt,pfam_Znr_NADH_PPase,pfam_NADH_PPase-like_N,superfamily_NUDIX_hydrolase_dom-like,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	NUDT12	HGNC	ENSG00000112874				180	0	0	155	29	15.7609
APC	0	genome.wustl.edu	37	5	112177864	112177864	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	112177864	112177864	A	-	DEL	APC	ENST00000257430	human	ensembl	74_37	+1	known	frame_shift_del	c.6573	p.V2194fs	0.189	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				138	0	0	120	25	17.2414
AQPEP	0	genome.wustl.edu	37	5	115361762	115361762	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	115361762	115361762	A	-	DEL	AQPEP	ENST00000357872	human	ensembl	74_37	+1	known	frame_shift_del	c.2920	p.N975fs	0.120	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_gn	ENSG00000172901				102	0	0	68	20	22.7273
RAPGEF6	0	genome.wustl.edu	37	5	130782332	130782332	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	130782332	130782332	T	-	DEL	RAPGEF6	ENST00000509018	human	ensembl	74_37	-1	known	frame_shift_del	c.3265	p.R1089fs	1.000	superfamily_Ras_GEF_dom,smart_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_PDZ,pfam_Ras-assoc,pfam_cNMP-bd_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF6	HGNC	ENSG00000158987				311	0	0	239	55	18.7075
TCF7	0	genome.wustl.edu	37	5	133478536	133478538	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	133478536	133478538	AAG	-	DEL	TCF7	ENST00000321584	human	ensembl	74_37	+1	known	in_frame_del	c.880_882	p.K294in_frame_del	1.000:1.000:1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7	HGNC	ENSG00000081059				151	0	0	127	28	18.0645
KDM3B	0	genome.wustl.edu	37	5	137756625	137756625	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	137756625	137756625	C	-	DEL	KDM3B	ENST00000314358	human	ensembl	74_37	+1	known	frame_shift_del	c.3946	p.P1317fs	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC	ENSG00000120733				225	0	0	168	43	20.3791
EGR1	0	genome.wustl.edu	37	5	137803132	137803132	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	137803132	137803132	C	-	DEL	EGR1	ENST00000239938	human	ensembl	74_37	+1	known	frame_shift_del	c.994	p.H334fs	1.000	NULL	pfam_DUF3432,pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR1	HGNC	ENSG00000120738				154	0	0	137	16	10.4575
CTNNA1	0	genome.wustl.edu	37	5	138253516	138253516	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	138253516	138253516	A	-	DEL	CTNNA1	ENST00000302763	human	ensembl	74_37	+1	known	frame_shift_del	c.1475	p.K493fs	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA1	HGNC	ENSG00000044115				546	0	0	443	105	19.1606
CTNNA1	0	genome.wustl.edu	37	5	138260955	138260955	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	138260955	138260955	T	-	DEL	CTNNA1	ENST00000302763	human	ensembl	74_37	+1	known	frame_shift_del	c.1758	p.F587fs	0.844	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA1	HGNC	ENSG00000044115				86	0	0	67	13	16.25
PCDHGA8	0	genome.wustl.edu	37	5	140773871	140773871	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	140773871	140773871	G	-	DEL	PCDHGA8	ENST00000398604	human	ensembl	74_37	+1	known	frame_shift_del	c.1491	p.A499fs	0.017	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA8	HGNC	ENSG00000253767				68	0	0	40	8	16.6667
SH3RF2	0	genome.wustl.edu	37	5	145439558	145439558	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	145439558	145439558	C	-	DEL	SH3RF2	ENST00000359120	human	ensembl	74_37	+1	known	frame_shift_del	c.1685	p.S564fs	0.008	NULL	pfam_SH3_2,pfam_SH3_domain,pfam_Znf_C3HC4_RING-type,superfamily_SH3_domain,smart_Znf_RING,smart_SH3_domain,pfscan_SH3_domain,pfscan_Znf_RING,prints_SH3_domain	-	no_errors	SH3RF2	HGNC	ENSG00000156463				82	0	0	84	12	12.5
TCERG1	0	genome.wustl.edu	37	5	145886723	145886723	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	145886723	145886723	A	-	DEL	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	frame_shift_del	c.2863	p.K957fs	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649				208	0	0	164	41	20
PANK3	0	genome.wustl.edu	37	5	167991059	167991059	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	167991059	167991059	C	-	DEL	PANK3	ENST00000239231	human	ensembl	74_37	-1	known	frame_shift_del	c.647	p.G216fs	1.000	pfam_Type_II_PanK,tigrfam_Type_II_PanK	pfam_Type_II_PanK,tigrfam_Type_II_PanK	-	no_errors	PANK3	HGNC	ENSG00000120137				327	0	0	291	30	9.34579
SH3PXD2B	0	genome.wustl.edu	37	5	171765830	171765831	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	171765830	171765831	-	G	INS	SH3PXD2B	ENST00000311601	human	ensembl	74_37	-1	known	frame_shift_ins	c.2279_2278	p.R760fs	1.000:1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,pfam_SH3-like_bac-type,pfam_DUF1058,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2B	HGNC	ENSG00000174705				92	0	0	60	16	21.0526
SH3PXD2B	0	genome.wustl.edu	37	5	171833291	171833291	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	171833291	171833291	G	-	DEL	SH3PXD2B	ENST00000311601	human	ensembl	74_37	-1	known	frame_shift_del	c.222	p.L76fs	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,pfam_SH3-like_bac-type,pfam_DUF1058,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2B	HGNC	ENSG00000174705				304	0	0	231	44	16
BTNL3	0	genome.wustl.edu	37	5	180432665	180432665	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	180432665	180432665	C	-	DEL	BTNL3	ENST00000342868	human	ensembl	74_37	+1	known	frame_shift_del	c.1194	p.S401fs	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like_dom,prints_Butyrophylin	-	no_errors	BTNL3	HGNC	ENSG00000168903				114	0	0	98	26	20.9677
TRIM7	0	genome.wustl.edu	37	5	180625788	180625788	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	180625788	180625788	C	-	DEL	TRIM7	ENST00000274773	human	ensembl	74_37	-1	known	frame_shift_del	c.890	p.G297fs	0.954	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin,prints_Znf_B-box_chordata	-	no_errors	TRIM7	HGNC	ENSG00000146054				52	0	0	41	9	18
PDZD2	0	genome.wustl.edu	37	5	32097388	32097390	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	32097388	32097390	GAA	-	DEL	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	in_frame_del	c.7849_7851	p.E2618in_frame_del	1.000:1.000:1.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				119	0	0	84	13	13.4021
KIAA0947	0	genome.wustl.edu	37	5	5463182	5463182	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	5463182	5463182	A	-	DEL	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	frame_shift_del	c.3735	p.N1247fs	0.000	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151				47	0	0	37	11	22.9167
MAST4	0	genome.wustl.edu	37	5	66461665	66461665	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	66461665	66461665	G	-	DEL	MAST4	ENST00000404260	human	ensembl	74_37	+1	known	frame_shift_del	c.6667	p.A2224fs	0.026	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST4	HGNC	ENSG00000069020				37	0	0	26	7	21.2121
BDP1	0	genome.wustl.edu	37	5	70806878	70806878	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	70806878	70806878	A	-	DEL	BDP1	ENST00000358731	human	ensembl	74_37	+1	known	frame_shift_del	c.3959	p.N1321fs	0.035	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	BDP1	HGNC	ENSG00000145734				197	0	0	130	43	24.8555
MAP1B	0	genome.wustl.edu	37	5	71491429	71491429	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	71491429	71491429	A	-	DEL	MAP1B	ENST00000296755	human	ensembl	74_37	+1	known	frame_shift_del	c.2247	p.K751fs	0.001	NULL	pfam_MAP1B_neuraxin	-	no_errors	MAP1B	HGNC	ENSG00000131711				168	0	0	114	26	18.5714
FCHO2	0	genome.wustl.edu	37	5	72264329	72264329	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	72264329	72264329	A	-	DEL	FCHO2	ENST00000341845	human	ensembl	74_37	+1	known	frame_shift_del	c.38	p.N15fs	1.000	pfam_FCH_dom,smart_FCH_dom,pfscan_FCH_dom	pfam_Muniscin_C-term_mu_dom,pfam_FCH_dom,smart_FCH_dom,pfscan_FCH_dom	-	no_errors	FCHO2	HGNC	ENSG00000157107				14	0	0	6	5	45.4545
OTP	0	genome.wustl.edu	37	5	76932754	76932754	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	76932754	76932754	G	-	DEL	OTP	ENST00000306422	human	ensembl	74_37	-1	known	frame_shift_del	c.339	p.A114fs	0.277	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_HTH_motif,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	OTP	HGNC	ENSG00000171540				227	0	0	186	17	8.37438
TBCA	0	genome.wustl.edu	37	5	76989051	76989051	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	76989051	76989051	A	-	DEL	TBCA	ENST00000306388	human	ensembl	74_37	-1	putative	frame_shift_del	c.286	p.S96fs	0.176	NULL	pfam_CofA_tubulin-bd,superfamily_CofA_tubulin-bd	-	no_errors	TBCA	HGNC	ENSG00000171530				50	0	0	32	12	27.2727
GPR98	0	genome.wustl.edu	37	5	90449208	90449208	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	90449208	90449208	A	-	DEL	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	frame_shift_del	c.18795	p.T6267fs	1.000	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				30	0	0	29	7	19.4444
ELL2	0	genome.wustl.edu	37	5	95234467	95234467	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	5	95234467	95234467	T	-	DEL	ELL2	ENST00000237853	human	ensembl	74_37	-1	known	frame_shift_del	c.1002	p.A335fs	1.000	NULL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL2	HGNC	ENSG00000118985				372	0	0	303	61	16.7582
REV3L	0	genome.wustl.edu	37	6	111697578	111697578	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	111697578	111697578	A	-	DEL	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	frame_shift_del	c.1980	p.F660fs	1.000	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413				175	0	0	148	18	10.8434
RFX6	0	genome.wustl.edu	37	6	117237372	117237372	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	117237372	117237372	T	-	DEL	RFX6	ENST00000332958	human	ensembl	74_37	+1	known	frame_shift_del	c.867	p.L291fs	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX6	HGNC	ENSG00000185002				303	0	0	222	64	22.3776
THEMIS	0	genome.wustl.edu	37	6	128134568	128134568	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	128134568	128134568	T	-	DEL	THEMIS	ENST00000543064	human	ensembl	74_37	-1	known	frame_shift_del	c.1218	p.V407fs	0.397	NULL	NULL	-	no_errors	THEMIS	HGNC	ENSG00000172673				154	0	0	157	24	13.2597
AKAP7	0	genome.wustl.edu	37	6	131602673	131602673	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	131602673	131602673	A	-	DEL	AKAP7	ENST00000368123	human	ensembl	74_37	+1	known	frame_shift_del	c.788	p.K264fs	1.000	superfamily_RNA_ligase/cNuc_Pdiesterase	pfam_Kinase-A_anchor_nucl_local_sig,pfam_Kinase-A_anchor_RI-RII-bd_dom,superfamily_RNA_ligase/cNuc_Pdiesterase	-	no_errors	AKAP7	HGNC	ENSG00000118507				91	0	0	52	11	17.4603
STXBP5	0	genome.wustl.edu	37	6	147684582	147684582	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	147684582	147684582	A	-	DEL	STXBP5	ENST00000321680	human	ensembl	74_37	+1	known	frame_shift_del	c.2657	p.D888fs	1.000	superfamily_WD40_repeat_dom	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C_dom,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5	HGNC	ENSG00000164506				102	0	0	69	22	24.1758
ACAT2	0	genome.wustl.edu	37	6	160196216	160196216	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	160196216	160196216	A	-	DEL	ACAT2	ENST00000541436	human	ensembl	74_37	+1	known	frame_shift_del	c.592	p.K199fs	1.000	pfam_Thiolase_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAT2	HGNC	ENSG00000120437				106	0	0	79	18	18.5567
DLL1	0	genome.wustl.edu	37	6	170592611	170592611	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	170592611	170592611	C	-	DEL	DLL1	ENST00000366756	human	ensembl	74_37	-1	known	frame_shift_del	c.1756	p.E586fs	0.990	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	DLL1	HGNC	ENSG00000198719				84	0	0	80	9	10.1124
DEK	0	genome.wustl.edu	37	6	18258595	18258596	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	18258595	18258596	-	T	INS	DEK	ENST00000397239	human	ensembl	74_37	-1	known	frame_shift_ins	c.187_186	p.V62fs	1.000:1.000	NULL	pfam_DEK_C,pfam_SAP_dom,smart_SAP_dom	-	no_errors	DEK	HGNC	ENSG00000124795				265	0	0	198	52	20.8
BTN2A1	0	genome.wustl.edu	37	6	26465541	26465541	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	26465541	26465541	G	-	DEL	BTN2A1	ENST00000312541	human	ensembl	74_37	+1	known	frame_shift_del	c.841	p.E282fs	0.000	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTN2A1	HGNC	ENSG00000112763				229	0	0	141	32	18.4971
ZKSCAN3	0	genome.wustl.edu	37	6	28334042	28334042	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	28334042	28334042	A	-	DEL	ZKSCAN3	ENST00000252211	human	ensembl	74_37	+1	known	frame_shift_del	c.1597	p.N534fs	0.206	pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN3	HGNC	ENSG00000189298				161	0	0	137	23	14.375
DHX16	0	genome.wustl.edu	37	6	30621048	30621048	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	30621048	30621048	T	-	DEL	DHX16	ENST00000376442	human	ensembl	74_37	-1	known	frame_shift_del	c.3097	p.I1033fs	0.987	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX16	HGNC	ENSG00000204560				187	0	0	125	34	21.3836
VARS2	0	genome.wustl.edu	37	6	30889916	30889916	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	30889916	30889916	C	-	DEL	VARS2	ENST00000541562	human	ensembl	74_37	+1	known	frame_shift_del	c.1920	p.L642fs	1.000	pfam_aa-tRNA-synth_Ia,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	-	no_errors	VARS2	HGNC	ENSG00000137411				198	0	0	131	37	22.0238
BRD2	0	genome.wustl.edu	37	6	32948441	32948443	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	32948441	32948443	CTC	-	DEL	BRD2	ENST00000395289	human	ensembl	74_37	+1	known	in_frame_del	c.2457_2459	p.S823in_frame_del	0.927:1.000:1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD2	HGNC	ENSG00000204256				112	0	0	50	22	30.5556
ZBTB9	0	genome.wustl.edu	37	6	33423605	33423605	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	33423605	33423605	T	-	DEL	ZBTB9	ENST00000395064	human	ensembl	74_37	+1	known	frame_shift_del	c.728	p.R246fs	0.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB9	HGNC	ENSG00000213588				108	0	0	109	22	16.7939
TCP11	0	genome.wustl.edu	37	6	35088275	35088275	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	35088275	35088275	G	-	DEL	TCP11	ENST00000311875	human	ensembl	74_37	-1	known	frame_shift_del	c.903	p.T302fs	0.176	pfam_Tcp11	pfam_Tcp11	-	no_errors	TCP11	HGNC	ENSG00000124678				127	0	0	113	19	14.3939
FANCE	0	genome.wustl.edu	37	6	35425715	35425715	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	35425715	35425715	C	-	DEL	FANCE	ENST00000229769	human	ensembl	74_37	+1	known	frame_shift_del	c.923	p.P310fs	0.000	pfam_Fanconi_anaemia_gr_E_prot_C	pfam_Fanconi_anaemia_gr_E_prot_C	-	no_errors	FANCE	HGNC	ENSG00000112039				106	0	0	85	20	19.0476
LRFN2	0	genome.wustl.edu	37	6	40400212	40400212	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	40400212	40400212	G	-	DEL	LRFN2	ENST00000338305	human	ensembl	74_37	-1	known	frame_shift_del	c.641	p.P214fs	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN2	HGNC	ENSG00000156564				71	0	0	50	13	20.6349
APOBEC2	0	genome.wustl.edu	37	6	41029581	41029583	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	41029581	41029583	GAG	-	DEL	APOBEC2	ENST00000244669	human	ensembl	74_37	+1	known	in_frame_del	c.646_648	p.E217in_frame_del	0.970:0.999:0.999	NULL	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC2	HGNC	ENSG00000124701				155	0	0	103	20	16.2602
PRICKLE4	0	genome.wustl.edu	37	6	41752759	41752759	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	41752759	41752759	G	-	DEL	PRICKLE4	ENST00000335515	human	ensembl	74_37	+1	known	frame_shift_del	c.327	p.V111fs	0.991	pfam_PET_domain	pfam_Znf_LIM,pfam_PET_domain,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE4	HGNC	ENSG00000124593				166	0	0	146	25	14.6199
PRPH2	0	genome.wustl.edu	37	6	42689868	42689868	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	42689868	42689868	C	-	DEL	PRPH2	ENST00000230381	human	ensembl	74_37	-1	known	frame_shift_del	c.205	p.V69fs	0.753	pfam_Tetraspanin/Peripherin,prints_Peripherin/rom-1	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Peripherin/rom-1	-	no_errors	PRPH2	HGNC	ENSG00000112619				196	0	0	136	42	23.5955
GLTSCR1L	0	genome.wustl.edu	37	6	42832627	42832627	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	42832627	42832627	A	-	DEL	GLTSCR1L	ENST00000314073	human	ensembl	74_37	+1	known	frame_shift_del	c.2683	p.T897fs	1.000	NULL	NULL	-	no_errors	GLTSCR1L	HGNC	ENSG00000112624				99	0	0	78	15	16.129
DLK2	0	genome.wustl.edu	37	6	43418412	43418413	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	43418412	43418413	-	G	INS	DLK2	ENST00000357338	human	ensembl	74_37	-1	known	frame_shift_ins	c.1017_1016	p.G340fs	0.458:0.819	NULL	pfam_EG-like_dom,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DLK2	HGNC	ENSG00000171462				61	0	0	54	8	12.9032
AARS2	0	genome.wustl.edu	37	6	44269193	44269193	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	44269193	44269193	C	-	DEL	AARS2	ENST00000244571	human	ensembl	74_37	-1	known	frame_shift_del	c.2607	p.T871fs	0.008	tigrfam_Ala-tRNA-lgiase_IIc	pfam_Ala-tRNA-synth_IIc_N,pfam_tRNA_SAD,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,smart_tRNA_SAD,prints_Ala-tRNA-lgiase_IIc,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	-	no_errors	AARS2	HGNC	ENSG00000124608				156	0	0	142	14	8.97436
KLHL31	0	genome.wustl.edu	37	6	53519759	53519759	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	53519759	53519759	T	-	DEL	KLHL31	ENST00000370905	human	ensembl	74_37	-1	known	frame_shift_del	c.312	p.D105fs	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_DUF1668_ORYSA,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL31	HGNC	ENSG00000124743				253	0	0	237	59	19.9324
KIAA1586	0	genome.wustl.edu	37	6	56917519	56917519	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	56917519	56917519	T	-	DEL	KIAA1586	ENST00000370733	human	ensembl	74_37	+1	known	frame_shift_del	c.222	p.L76fs	0.001	NULL	superfamily_RNaseH-like_dom	-	no_errors	KIAA1586	HGNC	ENSG00000168116				128	0	0	98	12	10.9091
PHF3	0	genome.wustl.edu	37	6	64423498	64423500	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	64423498	64423500	AGA	-	DEL	PHF3	ENST00000262043	human	ensembl	74_37	+1	known	in_frame_del	c.6014_6016	p.K2006in_frame_del	0.992:0.040:0.975	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	PHF3	HGNC	ENSG00000118482				53	0	0	28	6	17.6471
COL9A1	0	genome.wustl.edu	37	6	70991121	70991121	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	70991121	70991121	G	-	DEL	COL9A1	ENST00000357250	human	ensembl	74_37	-1	known	frame_shift_del	c.848	p.P283fs	1.000	pfam_Collagen	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL9A1	HGNC	ENSG00000112280				53	0	0	38	8	17.3913
DSP	0	genome.wustl.edu	37	6	7580509	7580509	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	7580509	7580509	A	-	DEL	DSP	ENST00000379802	human	ensembl	74_37	+1	known	frame_shift_del	c.4086	p.N1364fs	0.741	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				127	0	0	117	29	19.863
COL12A1	0	genome.wustl.edu	37	6	75899298	75899298	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	75899298	75899298	T	-	DEL	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	frame_shift_del	c.628	p.I210fs	0.999	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				338	0	0	218	58	21.0145
KIAA1009	0	genome.wustl.edu	37	6	84870551	84870551	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	6	84870551	84870551	T	-	DEL	KIAA1009	ENST00000403245	human	ensembl	74_37	-1	known	frame_shift_del	c.2761	p.I921fs	1.000	NULL	NULL	-	no_errors	KIAA1009	HGNC	ENSG00000135315				188	0	0	135	32	19.1617
PCOLCE	0	genome.wustl.edu	37	7	100201128	100201128	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	100201128	100201128	C	-	DEL	PCOLCE	ENST00000223061	human	ensembl	74_37	+1	known	frame_shift_del	c.171	p.P59fs	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Netrin_module_non-TIMP,superfamily_CUB_dom,superfamily_TIMP-like_OB-fold,smart_CUB_dom,smart_Netrin_module_non-TIMP,pfscan_CUB_dom,pfscan_Netrin_domain	-	no_errors	PCOLCE	HGNC	ENSG00000106333				71	0	0	68	15	18.0723
PLOD3	0	genome.wustl.edu	37	7	100855927	100855927	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	100855927	100855927	G	-	DEL	PLOD3	ENST00000223127	human	ensembl	74_37	-1	known	frame_shift_del	c.889	p.R297fs	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397				66	0	0	39	6	13.3333
NAPEPLD	0	genome.wustl.edu	37	7	102760123	102760123	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	102760123	102760123	A	-	DEL	NAPEPLD	ENST00000455523	human	ensembl	74_37	-1	known	frame_shift_del	c.1061	p.F354fs	1.000	NULL	NULL	-	no_errors	NAPEPLD	HGNC	ENSG00000161048				141	0	0	151	36	19.2513
LSMEM1	0	genome.wustl.edu	37	7	112127036	112127037	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	112127036	112127037	-	T	INS	LSMEM1	ENST00000312849	human	ensembl	74_37	+1	known	frame_shift_ins	c.186_187	p.V64fs	0.031:0.028	NULL	NULL	-	no_errors	LSMEM1	HGNC	ENSG00000181016				172	0	0	128	46	26.4368
TAS2R16	0	genome.wustl.edu	37	7	122635425	122635425	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	122635425	122635425	A	-	DEL	TAS2R16	ENST00000249284	human	ensembl	74_37	-1	known	frame_shift_del	c.264	p.F88fs	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R16	HGNC	ENSG00000128519				91	0	0	80	25	23.8095
FLNC	0	genome.wustl.edu	37	7	128481391	128481391	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	128481391	128481391	G	-	DEL	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	frame_shift_del	c.1981	p.A661fs	1.000	superfamily_Ig_E-set,smart_Filamin	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591				276	0	0	226	35	13.41
LRGUK	0	genome.wustl.edu	37	7	133863282	133863282	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	133863282	133863282	C	-	DEL	LRGUK	ENST00000285928	human	ensembl	74_37	+1	known	frame_shift_del	c.1135	p.P380fs	1.000	NULL	pfam_GK/Ca_channel_bsu,pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	-	no_errors	LRGUK	HGNC	ENSG00000155530				129	0	0	91	19	17.2727
OR9A2	0	genome.wustl.edu	37	7	142723617	142723617	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	142723617	142723617	A	-	DEL	OR9A2	ENST00000350513	human	ensembl	74_37	-1	known	frame_shift_del	c.603	p.F201fs	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9A2	HGNC	ENSG00000179468				109	0	0	91	18	16.5138
ABCB5	0	genome.wustl.edu	37	7	20682918	20682919	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	20682918	20682919	-	T	INS	ABCB5	ENST00000404938	human	ensembl	74_37	+1	putative	frame_shift_ins	c.426_427	p.H144fs	0.885:0.998	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846				84	0	0	62	19	23.4568
RAPGEF5	0	genome.wustl.edu	37	7	22197474	22197474	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	22197474	22197474	T	-	DEL	RAPGEF5	ENST00000344041	human	ensembl	74_37	-1	known	frame_shift_del	c.1097	p.K366fs	1.000	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF5	HGNC	ENSG00000136237				77	0	0	80	13	13.9785
CARD11	0	genome.wustl.edu	37	7	2968323	2968323	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	2968323	2968323	G	-	DEL	CARD11	ENST00000396946	human	ensembl	74_37	-1	known	frame_shift_del	c.1663	p.R555fs	0.080	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD	-	no_errors	CARD11	HGNC	ENSG00000198286				86	0	0	54	6	10
GARS	0	genome.wustl.edu	37	7	30673453	30673453	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	30673453	30673453	A	-	DEL	GARS	ENST00000389266	human	ensembl	74_37	+1	known	frame_shift_del	c.2197	p.E735fs	1.000	NULL	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_WHEP-TRS,superfamily_Anticodon-bd,superfamily_S15_NS1_RNA-bd,prints_tRNA-synt_gly,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_tRNA-synt_gly	-	no_errors	GARS	HGNC	ENSG00000106105				108	0	0	59	16	21.3333
POLM	0	genome.wustl.edu	37	7	44120414	44120414	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	44120414	44120414	G	-	DEL	POLM	ENST00000242248	human	ensembl	74_37	-1	known	frame_shift_del	c.290	p.P97fs	0.047	superfamily_BRCT_dom,pirsf_TdT/Mu,pfscan_BRCT_dom	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_DNA-dir_DNA_pol_X,pirsf_TdT/Mu,pfscan_BRCT_dom,prints_TdT/Mu,prints_DNA_pol_X,prints_DNA_pol_X_beta-like	-	no_errors	POLM	HGNC	ENSG00000122678				135	0	0	101	13	11.4035
NPC1L1	0	genome.wustl.edu	37	7	44576448	44576448	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	44576448	44576448	C	-	DEL	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	frame_shift_del	c.1674	p.Y559fs	0.134	NULL	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520				67	0	0	59	16	21.3333
SUN3	0	genome.wustl.edu	37	7	48028463	48028463	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	48028463	48028463	T	-	DEL	SUN3	ENST00000297325	human	ensembl	74_37	-1	known	frame_shift_del	c.876	p.K292fs	0.989	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUN3	HGNC	ENSG00000164744				167	0	0	127	30	19.1083
RADIL	0	genome.wustl.edu	37	7	4876168	4876168	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	4876168	4876168	C	-	DEL	RADIL	ENST00000399583	human	ensembl	74_37	-1	known	frame_shift_del	c.604	p.D202fs	0.000	NULL	pfam_Dil_domain,pfam_Ras-assoc,pfam_PDZ,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	RADIL	HGNC	ENSG00000157927				33	0	0	22	7	24.1379
POM121L12	0	genome.wustl.edu	37	7	53104101	53104102	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	53104101	53104102	-	T	INS	POM121L12	ENST00000408890	human	ensembl	74_37	+1	known	frame_shift_ins	c.737_738	p.C248fs	0.000:0.000	NULL	NULL	-	no_errors	POM121L12	HGNC	ENSG00000221900				81	0	0	45	5	10
TRIM73	0	genome.wustl.edu	37	7	75034218	75034218	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	75034218	75034218	G	-	DEL	TRIM73	ENST00000323819	human	ensembl	74_37	+1	known	frame_shift_del	c.592	p.G199fs	0.131	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM73	HGNC	ENSG00000178809				136	0	0	137	9	6.16438
COL28A1	0	genome.wustl.edu	37	7	7557425	7557426	+	Splice_Site	INS	-	-	C			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	7557425	7557426	-	C	INS	COL28A1	ENST00000399429	human	ensembl	74_37	-1	known	splice_site_ins	c.855+1_855+1	e6+1	0.993:0.992	-	-	-	no_errors	COL28A1	HGNC	ENSG00000215018				338	0	0	254	70	21.6049
GSAP	0	genome.wustl.edu	37	7	76959580	76959581	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	76959580	76959581	CT	-	DEL	GSAP	ENST00000257626	human	ensembl	74_37	-1	known	frame_shift_del	c.1650_1649	p.E550fs	0.980:0.998	NULL	NULL	-	no_errors	GSAP	HGNC	ENSG00000186088				200	0	0	158	11	6.50888
PTPN12	0	genome.wustl.edu	37	7	77256248	77256248	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	77256248	77256248	A	-	DEL	PTPN12	ENST00000248594	human	ensembl	74_37	+1	known	frame_shift_del	c.1252	p.N419fs	1.000	pirsf_Ptpn_12	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Ptpn_12,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN12	HGNC	ENSG00000127947				116	0	0	79	20	20.202
KRIT1	0	genome.wustl.edu	37	7	91870426	91870426	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	91870426	91870426	T	-	DEL	KRIT1	ENST00000340022	human	ensembl	74_37	-1	known	frame_shift_del	c.143	p.K48fs	0.999	NULL	pfam_FERM_central,superfamily_Ankyrin_rpt-contain_dom,superfamily_FERM_central,smart_Ankyrin_rpt,smart_Band_41_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_FERM_domain	-	no_errors	KRIT1	HGNC	ENSG00000001631				130	0	0	106	18	14.5161
ZNF655	0	genome.wustl.edu	37	7	99170525	99170525	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	99170525	99170525	A	-	DEL	ZNF655	ENST00000424881	human	ensembl	74_37	+1	known	frame_shift_del	c.899	p.K301fs	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF655	HGNC	ENSG00000197343				134	0	0	95	28	22.7642
GPC2	0	genome.wustl.edu	37	7	99773286	99773286	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	7	99773286	99773286	G	-	DEL	GPC2	ENST00000292377	human	ensembl	74_37	-1	known	frame_shift_del	c.557	p.P186fs	1.000	pfam_Glypican	pfam_Glypican	-	no_errors	GPC2	HGNC	ENSG00000213420				69	0	0	38	10	20.8333
FZD6	0	genome.wustl.edu	37	8	104340619	104340619	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	104340619	104340619	T	-	DEL	FZD6	ENST00000358755	human	ensembl	74_37	+1	known	frame_shift_del	c.1516	p.F507fs	1.000	pfam_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD6	HGNC	ENSG00000164930				142	0	0	111	28	20.1439
PKHD1L1	0	genome.wustl.edu	37	8	110509434	110509434	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	110509434	110509434	T	-	DEL	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	frame_shift_del	c.10532	p.P3513fs	1.000	NULL	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				151	0	0	132	27	16.9811
ASAP1	0	genome.wustl.edu	37	8	131226887	131226887	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	131226887	131226887	A	-	DEL	ASAP1	ENST00000357668	human	ensembl	74_37	-1	known	frame_shift_del	c.320	p.L107fs	1.000	NULL	pfam_ArfGAP,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP,prints_p67phox	-	no_errors	ASAP1	HGNC	ENSG00000153317				146	0	0	118	37	23.871
SLC45A4	0	genome.wustl.edu	37	8	142221700	142221700	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	142221700	142221700	T	-	DEL	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	frame_shift_del	c.2398	p.I800fs	0.000	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				141	0	0	100	31	23.6641
CYC1	0	genome.wustl.edu	37	8	145150876	145150876	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	145150876	145150876	C	-	DEL	CYC1	ENST00000318911	human	ensembl	74_37	+1	known	frame_shift_del	c.270	p.S93fs	1.000	superfamily_Cyt_c-like_dom	pfam_Cyt_c1,superfamily_Cyt_c-like_dom,superfamily_Cyt_c1_TM_anchor_C,prints_Cyt_c1	-	no_errors	CYC1	HGNC	ENSG00000179091				90	0	0	50	7	12.2807
CSGALNACT1	0	genome.wustl.edu	37	8	19263296	19263296	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	19263296	19263296	T	-	DEL	CSGALNACT1	ENST00000311540	human	ensembl	74_37	-1	known	frame_shift_del	c.1594	p.T532fs	0.997	NULL	pfam_Chond_GalNAc	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408				187	0	0	143	40	21.8579
DMTN	0	genome.wustl.edu	37	8	21926552	21926552	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	21926552	21926552	C	-	DEL	DMTN	ENST00000265800	human	ensembl	74_37	+1	known	frame_shift_del	c.275	p.P94fs	1.000	NULL	pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin_headpiece,pfscan_Villin_headpiece	-	no_errors	DMTN	HGNC	ENSG00000158856				126	0	0	75	8	9.63855
FZD3	0	genome.wustl.edu	37	8	28409242	28409242	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	28409242	28409242	T	-	DEL	FZD3	ENST00000240093	human	ensembl	74_37	+1	known	frame_shift_del	c.1527	p.H512fs	1.000	pfam_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD3	HGNC	ENSG00000104290				189	0	0	135	29	17.6829
WRN	0	genome.wustl.edu	37	8	30915971	30915971	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	30915971	30915971	A	-	DEL	WRN	ENST00000298139	human	ensembl	74_37	+1	known	frame_shift_del	c.8	p.K5fs	0.139	NULL	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392				37	0	0	43	11	20.3704
CSMD1	0	genome.wustl.edu	37	8	3200920	3200920	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	3200920	3200920	T	-	DEL	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	frame_shift_del	c.3530	p.N1177fs	0.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				116	0	0	92	7	7.07071
RB1CC1	0	genome.wustl.edu	37	8	53569498	53569498	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	53569498	53569498	T	-	DEL	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	frame_shift_del	c.2891	p.K964fs	1.000	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287				270	0	0	187	48	20.4255
CYP7B1	0	genome.wustl.edu	37	8	65509466	65509466	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	65509466	65509466	A	-	DEL	CYP7B1	ENST00000310193	human	ensembl	74_37	-1	known	frame_shift_del	c.1254	p.F418fs	0.701	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	-	no_errors	CYP7B1	HGNC	ENSG00000172817				116	0	0	58	18	23.6842
KCNB2	0	genome.wustl.edu	37	8	73480396	73480397	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	73480396	73480397	-	A	INS	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	frame_shift_ins	c.427_428	p.E146fs	1.000:1.000	prints_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				186	0	0	131	38	22.4852
KCNB2	0	genome.wustl.edu	37	8	73849869	73849869	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	73849869	73849869	C	-	DEL	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	frame_shift_del	c.2279	p.S762fs	0.106	NULL	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				262	0	0	143	34	19.209
TNKS	0	genome.wustl.edu	37	8	9567544	9567544	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	9567544	9567544	A	-	DEL	TNKS	ENST00000310430	human	ensembl	74_37	+1	known	frame_shift_del	c.1658	p.N555fs	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS	HGNC	ENSG00000173273				139	0	0	106	18	14.5161
ESRP1	0	genome.wustl.edu	37	8	95686611	95686611	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	8	95686611	95686611	A	-	DEL	ESRP1	ENST00000433389	human	ensembl	74_37	+1	known	frame_shift_del	c.1528	p.N512fs	1.000	smart_RRM_dom	superfamily_RNaseH-like_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ESRP1	HGNC	ENSG00000104413				103	0	0	65	16	19.7531
TEX10	0	genome.wustl.edu	37	9	103111633	103111633	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	103111633	103111633	T	-	DEL	TEX10	ENST00000374902	human	ensembl	74_37	-1	known	frame_shift_del	c.13	p.R5fs	1.000	NULL	pfam_IPI1/TEX10,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	TEX10	HGNC	ENSG00000136891				54	0	0	48	8	14.2857
RAD23B	0	genome.wustl.edu	37	9	110062486	110062486	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	110062486	110062486	A	-	DEL	RAD23B	ENST00000358015	human	ensembl	74_37	+1	known	frame_shift_del	c.131	p.K45fs	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,tigrfam_Rad23	pfam_XPC-bd,pfam_Ubiquitin_dom,pfam_UBA/Ts_N,pfam_Rad60/SUMO_like,superfamily_XPC-bd,superfamily_UBA-like,smart_Ubiquitin_dom,smart_UBA/transl_elong_EF1B_N_euk,smart_STI1_HS-bd,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup,prints_Rad23,tigrfam_Rad23	-	no_errors	RAD23B	HGNC	ENSG00000119318				100	0	0	89	15	14.4231
ZFP37	0	genome.wustl.edu	37	9	115806416	115806416	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	115806416	115806416	T	-	DEL	ZFP37	ENST00000553380	human	ensembl	74_37	-1	known	frame_shift_del	c.527	p.N176fs	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP37	HGNC	ENSG00000136866				274	0	0	183	49	21.1207
COL27A1	0	genome.wustl.edu	37	9	117052381	117052381	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	117052381	117052381	G	-	DEL	COL27A1	ENST00000356083	human	ensembl	74_37	+1	known	frame_shift_del	c.4250	p.V1419fs	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL27A1	HGNC	ENSG00000196739				41	0	0	37	9	19.5652
ABL1	0	genome.wustl.edu	37	9	133760024	133760024	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	133760024	133760024	C	-	DEL	ABL1	ENST00000372348	human	ensembl	74_37	+1	known	frame_shift_del	c.2404	p.R804fs	1.000	NULL	pfam_F-actin_binding,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL1	HGNC	ENSG00000097007				60	0	0	40	13	24.5283
GTF3C4	0	genome.wustl.edu	37	9	135554690	135554691	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	135554690	135554691	-	A	INS	GTF3C4	ENST00000372146	human	ensembl	74_37	+1	known	frame_shift_ins	c.1684_1685	p.I565fs	1.000:1.000	NULL	superfamily_WD40_repeat_dom	-	no_errors	GTF3C4	HGNC	ENSG00000125484				308	0	0	269	68	20.178
SEC16A	0	genome.wustl.edu	37	9	139369409	139369412	+	Frame_Shift_Del	DEL	CAGA	CAGA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CAGA	CAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	139369409	139369412	CAGA	-	DEL	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	frame_shift_del	c.2659_2656	p.S886fs	0.020:0.004:0.008:0.002	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396				77	0	0	48	11	18.6441
TPRN	0	genome.wustl.edu	37	9	140093439	140093441	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	140093439	140093441	CTT	-	DEL	TPRN	ENST00000409012	human	ensembl	74_37	-1	known	in_frame_del	c.1725_1723	p.K575in_frame_del	1.000:1.000:1.000	NULL	NULL	-	no_errors	TPRN	HGNC	ENSG00000176058				142	0	0	104	15	12.605
NDOR1	0	genome.wustl.edu	37	9	140108703	140108703	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	140108703	140108703	C	-	DEL	NDOR1	ENST00000371521	human	ensembl	74_37	+1	known	frame_shift_del	c.560	p.T187fs	0.000	superfamily_Riboflavin_synthase-like_b-brl	pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NDOR1	HGNC	ENSG00000188566				46	0	0	41	6	12.766
PNPLA7	0	genome.wustl.edu	37	9	140356679	140356679	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	140356679	140356679	G	-	DEL	PNPLA7	ENST00000406427	human	ensembl	74_37	-1	known	frame_shift_del	c.3597	p.I1200fs	1.000	superfamily_Acyl_Trfase/lysoPLipase	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA7	HGNC	ENSG00000130653				47	0	0	37	6	13.9535
ZMYND19	0	genome.wustl.edu	37	9	140481542	140481542	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	140481542	140481542	C	-	DEL	ZMYND19	ENST00000298585	human	ensembl	74_37	-1	known	frame_shift_del	c.236	p.G79fs	0.986	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND19	HGNC	ENSG00000165724				133	0	0	103	15	12.7119
FOCAD	0	genome.wustl.edu	37	9	20953057	20953057	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	20953057	20953057	A	-	DEL	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	frame_shift_del	c.4125	p.G1378fs	0.983	pfam_DUF3028	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				97	0	0	47	19	28.7879
AQP3	0	genome.wustl.edu	37	9	33442934	33442934	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	33442934	33442934	A	-	DEL	AQP3	ENST00000297991	human	ensembl	74_37	-1	known	frame_shift_del	c.408	p.F136fs	0.012	pfam_MIP,superfamily_Aquaporin-like,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_Aquaporin_3,prints_MIP,tigrfam_MIP	-	no_errors	AQP3	HGNC	ENSG00000165272				161	0	0	107	18	14.4
ZNF658	0	genome.wustl.edu	37	9	40772691	40772691	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	40772691	40772691	T	-	DEL	ZNF658	ENST00000377626	human	ensembl	74_37	-1	known	frame_shift_del	c.2584	p.T862fs	0.007	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF658	HGNC	ENSG00000196409				334	0	0	254	30	10.5634
KIAA1432	0	genome.wustl.edu	37	9	5753614	5753614	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	5753614	5753614	A	-	DEL	KIAA1432	ENST00000418622	human	ensembl	74_37	+1	known	frame_shift_del	c.1333	p.K446fs	1.000	NULL	pfam_Ribosome_control_1,superfamily_WD40_repeat_dom	-	no_errors	KIAA1432	HGNC	ENSG00000107036				119	0	0	101	16	13.6752
KIAA2026	0	genome.wustl.edu	37	9	5968162	5968162	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	5968162	5968162	T	-	DEL	KIAA2026	ENST00000399933	human	ensembl	74_37	-1	novel	frame_shift_del	c.2069	p.K690fs	1.000	NULL	superfamily_Bromodomain	-	no_errors	KIAA2026	HGNC	ENSG00000183354				47	0	0	27	8	22.8571
PGM5	0	genome.wustl.edu	37	9	71006490	71006490	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	9	71006490	71006490	G	-	DEL	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	frame_shift_del	c.738	p.A248fs	0.997	pfam_A-D-PHexomutase_a/b/a-II	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330				266	0	0	175	14	7.40741
TEX13A	0	genome.wustl.edu	37	X	104463832	104463832	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	104463832	104463832	C	-	DEL	TEX13A	ENST00000413579	human	ensembl	74_37	-1	known	frame_shift_del	c.1044	p.H350fs	0.000	NULL	pfam_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	TEX13A	HGNC	ENSG00000133149				66	0	0	60	30	33.3333
TBC1D8B	0	genome.wustl.edu	37	X	106069300	106069300	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	106069300	106069300	T	-	DEL	TBC1D8B	ENST00000357242	human	ensembl	74_37	+1	known	frame_shift_del	c.868	p.F291fs	0.995	pfam_GRAM,smart_GRAM	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8B	HGNC	ENSG00000133138				166	0	0	72	51	41.4634
IRS4	0	genome.wustl.edu	37	X	107977803	107977803	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	107977803	107977803	C	-	DEL	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	frame_shift_del	c.1772	p.G591fs	0.016	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124				238	0	0	137	77	35.9813
UPF3B	0	genome.wustl.edu	37	X	118975216	118975217	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	118975216	118975217	CA	-	DEL	UPF3B	ENST00000276201	human	ensembl	74_37	-1	known	frame_shift_del	c.630_629	p.M210fs	1.000:1.000	NULL	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3B	HGNC	ENSG00000125351				163	0	0	102	61	37.4233
BCORL1	0	genome.wustl.edu	37	X	129190011	129190011	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	129190011	129190011	C	-	DEL	BCORL1	ENST00000303743	human	ensembl	74_37	+1	known	frame_shift_del	c.5258	p.P1755fs	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCORL1	HGNC	ENSG00000085185				73	0	0	52	13	20
PASD1	0	genome.wustl.edu	37	X	150842425	150842425	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	150842425	150842425	C	-	DEL	PASD1	ENST00000370357	human	ensembl	74_37	+1	known	frame_shift_del	c.1942	p.V650fs	0.000	NULL	superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PASD1	HGNC	ENSG00000166049				117	0	0	99	36	26.6667
XK	0	genome.wustl.edu	37	X	37587584	37587585	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	37587584	37587585	-	A	INS	XK	ENST00000378616	human	ensembl	74_37	+1	known	frame_shift_ins	c.1204_1205	p.P404fs	0.000:0.000	NULL	pfam_Transport_prot_XK	-	no_errors	XK	HGNC	ENSG00000047597				73	0	0	43	31	41.8919
KDM5C	0	genome.wustl.edu	37	X	53246393	53246393	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	53246393	53246393	G	-	DEL	KDM5C	ENST00000375401	human	ensembl	74_37	-1	known	frame_shift_del	c.589	p.L197fs	1.000	NULL	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_Znf_PHD-finger,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5C	HGNC	ENSG00000126012				24	0	0	7	10	58.8235
WNK3	0	genome.wustl.edu	37	X	54228568	54228568	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	54228568	54228568	T	-	DEL	WNK3	ENST00000354646	human	ensembl	74_37	-1	known	frame_shift_del	c.4929	p.M1645fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK3	HGNC	ENSG00000196632				44	0	0	34	17	33.3333
UBQLN2	0	genome.wustl.edu	37	X	56591874	56591874	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	56591874	56591874	C	-	DEL	UBQLN2	ENST00000338222	human	ensembl	74_37	+1	known	frame_shift_del	c.1568	p.P525fs	0.175	NULL	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN2	HGNC	ENSG00000188021				11	0	0	3	2	40
MAP2K4P1	0	genome.wustl.edu	37	X	72744763	72744763	+	RNA	DEL	T	T	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	72744763	72744763	T	-	DEL	MAP2K4P1	ENST00000602584	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	MAP2K4P1	HGNC	ENSG00000269904				25	0	0	10	12	54.5455
XIST	0	genome.wustl.edu	37	X	73053273	73053273	+	RNA	DEL	A	A	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	73053273	73053273	A	-	DEL	XIST	ENST00000602495	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				52	0	0	21	15	41.6667
FAM46D	0	genome.wustl.edu	37	X	79699146	79699146	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5723-01A-11D-1600-08	TCGA-CG-5723-11A-02D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ffb4f42b-58e9-40c3-8963-11804f041375	e4834ec5-3085-4675-8d63-23f546b30799	X	79699146	79699146	C	-	DEL	FAM46D	ENST00000308293	human	ensembl	74_37	+1	known	frame_shift_del	c.1108	p.V372fs	0.734	NULL	pfam_DUF1693	-	no_errors	FAM46D	HGNC	ENSG00000174016				41	0	0	24	9	27.2727
