Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
VANGL2	0	genome.wustl.edu	37	1	160389028	160389028	+	Silent	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	160389028	160389028	G	A	SNP	VANGL2	ENST00000368061	human	ensembl	74_37	+1	known	silent	c.429	p.T143	0.987	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL2	HGNC	ENSG00000162738				80	0	0	30	29	49.1525
HIST3H2A	0	genome.wustl.edu	37	1	228645463	228645463	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	228645463	228645463	G	A	SNP	HIST3H2A	ENST00000366695	human	ensembl	74_37	-1	known	missense	c.56	p.S19L	0.999	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST3H2A	HGNC	ENSG00000181218				43	0	0	22	14	38.8889
KDM4A	0	genome.wustl.edu	37	1	44159762	44159762	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	44159762	44159762	C	T	SNP	KDM4A	ENST00000372396	human	ensembl	74_37	+1	known	missense	c.2473	p.R825C	0.996	superfamily_Znf_FYVE_PHD	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4A	HGNC	ENSG00000066135				51	0	0	1	21	95.4545
CDC123	0	genome.wustl.edu	37	10	12291586	12291586	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	10	12291586	12291586	C	T	SNP	CDC123	ENST00000281141	human	ensembl	74_37	+1	known	missense	c.853	p.P285S	1.000	pfam_D123,pirsf_Cell_div_Cdc123	pfam_D123,pirsf_Cell_div_Cdc123	-	no_errors	CDC123	HGNC	ENSG00000151465				150	0	0	83	7	7.77778
BMS1	0	genome.wustl.edu	37	10	43294033	43294033	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	10	43294033	43294033	G	A	SNP	BMS1	ENST00000374518	human	ensembl	74_37	+1	known	missense	c.2207	p.R736K	0.683	superfamily_P-loop_NTPase	pfam_BMS1_TSR1_C,pfam_AARP2CN,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AARP2CN	-	no_errors	BMS1	HGNC	ENSG00000165733				170	0	0	64	56	46.6667
IFIT3	0	genome.wustl.edu	37	10	91099105	91099105	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	10	91099105	91099105	A	C	SNP	IFIT3	ENST00000371811	human	ensembl	74_37	+1	known	missense	c.693	p.E231D	0.338	pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFIT3	HGNC	ENSG00000119917				126	0	0	13	35	72.9167
ZNF195	0	genome.wustl.edu	37	11	3381028	3381028	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	3381028	3381028	C	A	SNP	ZNF195	ENST00000399602	human	ensembl	74_37	-1	known	nonsense	c.1210	p.E404*	0.983	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF195	HGNC	ENSG00000005801				416	0	0	26	102	79.6875
C11orf49	0	genome.wustl.edu	37	11	47183053	47183053	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	47183053	47183053	C	G	SNP	C11orf49	ENST00000378615	human	ensembl	74_37	+1	known	missense	c.878	p.A293G	0.993	NULL	NULL	-	no_errors	C11orf49	HGNC	ENSG00000149179				96	0	0	42	25	37.3134
C11orf49	0	genome.wustl.edu	37	11	47183076	47183076	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	47183076	47183076	C	T	SNP	C11orf49	ENST00000378615	human	ensembl	74_37	+1	known	missense	c.901	p.P301S	1.000	NULL	NULL	-	no_errors	C11orf49	HGNC	ENSG00000149179				105	0	0	45	23	33.8235
OR4A5	0	genome.wustl.edu	37	11	51412276	51412276	+	Silent	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	51412276	51412276	G	A	SNP	OR4A5	ENST00000319760	human	ensembl	74_37	-1	known	silent	c.120	p.N40	0.952	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A5	HGNC	ENSG00000221840				69	0	0	35	28	44.4444
OR5M3	0	genome.wustl.edu	37	11	56237947	56237947	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	56237947	56237947	C	A	SNP	OR5M3	ENST00000312240	human	ensembl	74_37	-1	known	missense	c.27	p.E9D	0.746	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M3	HGNC	ENSG00000174937				98	0	0	70	7	9.09091
KIF5A	0	genome.wustl.edu	37	12	57970599	57970599	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	12	57970599	57970599	C	A	SNP	KIF5A	ENST00000455537	human	ensembl	74_37	+1	known	missense	c.2254	p.L752M	1.000	superfamily_Prefoldin	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5A	HGNC	ENSG00000155980				83	0	0	25	15	37.5
SLC25A47	0	genome.wustl.edu	37	14	100793646	100793646	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	14	100793646	100793646	C	T	SNP	SLC25A47	ENST00000361529	human	ensembl	74_37	+1	known	missense	c.266	p.P89L	0.020	superfamily_Mt_carrier_dom	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A47	HGNC	ENSG00000140107				92	0	0	47	37	44.0476
CPSF2	0	genome.wustl.edu	37	14	92625468	92625468	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	14	92625468	92625468	G	A	SNP	CPSF2	ENST00000298875	human	ensembl	74_37	+1	known	missense	c.1963	p.D655N	1.000	NULL	pfam_Beta_Casp,pfam_RMMBL,pfam_Beta-lactamas-like,smart_Beta-lactamas-like	-	no_errors	CPSF2	HGNC	ENSG00000165934				133	0	0	71	42	37.1681
NPAP1	0	genome.wustl.edu	37	15	24922006	24922006	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	15	24922006	24922006	C	T	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	missense	c.992	p.S331L	0.001	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823				54	0	0	5	36	87.8049
THBS1	0	genome.wustl.edu	37	15	39885837	39885837	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	15	39885837	39885837	G	A	SNP	THBS1	ENST00000260356	human	ensembl	74_37	+1	known	missense	c.3235	p.A1079T	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl_sf	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801				277	0	0	155	33	17.5532
HMG20A	0	genome.wustl.edu	37	15	77769900	77769900	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	15	77769900	77769900	G	A	SNP	HMG20A	ENST00000336216	human	ensembl	74_37	+1	known	missense	c.619	p.E207K	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	HMG20A	HGNC	ENSG00000140382				76	0	0	23	9	28.125
LOC645752	0	genome.wustl.edu	37	15	78212618	78212618	+	RNA	SNP	A	A	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	15	78212618	78212618	A	G	SNP	LOC645752	ENST00000567226	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	RP11-114H24.2	Clone_based_vega_gene	ENSG00000260776				56	0	0	78	5	6.0241
MTSS1L	0	genome.wustl.edu	37	16	70697913	70697913	+	Silent	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	16	70697913	70697913	C	T	SNP	MTSS1L	ENST00000338779	human	ensembl	74_37	-1	known	silent	c.1911	p.R637	0.999	NULL	pfam_IRSp53/MIM_homology_IMD	-	no_errors	MTSS1L	HGNC	ENSG00000132613				11	0	0	6	4	40
PMP22	0	genome.wustl.edu	37	17	15134175	15134175	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	15134175	15134175	T	G	SNP	PMP22	ENST00000494511	human	ensembl	74_37	-1	novel	missense	c.363	p.K121N	0.812	NULL	NULL	-	no_errors	PMP22	HGNC	ENSG00000109099				125	0	0	32	3	8.57143
TOP2A	0	genome.wustl.edu	37	17	38560458	38560458	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	38560458	38560458	C	A	SNP	TOP2A	ENST00000423485	human	ensembl	74_37	-1	known	missense	c.2229	p.K743N	1.000	pfam_Topo_IIA_A/C,superfamily_Topo_IIA_like_dom,smart_Topo_IIA_A/C,prints_TopoII_euk	pfam_Topo_IIA_A/C,pfam_Topo_IIA_bsu_dom2,pfam_DTHCT,pfam_HATPase_ATP-bd,superfamily_Topo_IIA_like_dom,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_Topo_IIA,smart_Topo_IIA_A/C,prints_TopoII_euk,prints_Topo_IIA,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	TOP2A	HGNC	ENSG00000131747				421	1	0.236967	148	109	42.4125
TANC2	0	genome.wustl.edu	37	17	61498904	61498904	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	61498904	61498904	G	A	SNP	TANC2	ENST00000424789	human	ensembl	74_37	+1	known	missense	c.5561	p.R1854Q	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC2	HGNC	ENSG00000170921				146	0	0	73	44	37.6068
TMEM104	0	genome.wustl.edu	37	17	72785005	72785005	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	72785005	72785005	T	G	SNP	TMEM104	ENST00000335464	human	ensembl	74_37	+1	known	missense	c.245	p.L82R	1.000	NULL	pfam_AA_transpt_TM	-	no_errors	TMEM104	HGNC	ENSG00000109066				39	0	0	15	20	57.1429
CASKIN2	0	genome.wustl.edu	37	17	73498181	73498181	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	73498181	73498181	G	A	SNP	CASKIN2	ENST00000321617	human	ensembl	74_37	-1	known	missense	c.2974	p.R992W	0.996	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_SH3_domain,prints_Ankyrin_rpt	-	no_errors	CASKIN2	HGNC	ENSG00000177303				50	0	0	33	14	29.7872
ZNF536	0	genome.wustl.edu	37	19	31039824	31039824	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	19	31039824	31039824	G	A	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.3298	p.V1100M	0.953	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597				117	0	0	59	49	45.3704
DHX34	0	genome.wustl.edu	37	19	47870310	47870310	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	19	47870310	47870310	A	G	SNP	DHX34	ENST00000328771	human	ensembl	74_37	+1	known	missense	c.1666	p.T556A	1.000	superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX34	HGNC	ENSG00000134815				59	0	0	34	4	10.5263
LONP1	0	genome.wustl.edu	37	19	5692159	5692159	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	19	5692159	5692159	C	T	SNP	LONP1	ENST00000360614	human	ensembl	74_37	-1	known	missense	c.2764	p.D922N	0.998	pfam_Pept_S16_C,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Prk_AAA_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP1	HGNC	ENSG00000196365				199	0	0	20	63	75.9036
GCC2	0	genome.wustl.edu	37	2	109087107	109087107	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	109087107	109087107	A	G	SNP	GCC2	ENST00000309863	human	ensembl	74_37	+1	known	missense	c.1322	p.N441S	0.982	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,smart_GRIP,pfscan_GRIP	-	no_errors	GCC2	HGNC	ENSG00000135968				102	0	0	43	38	46.9136
ANKRD36C	0	genome.wustl.edu	37	2	96521777	96521777	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	96521777	96521777	T	C	SNP	ANKRD36C	ENST00000456556	human	ensembl	74_37	-1	known	missense	c.4232	p.H1411R	0.464	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36C	HGNC	ENSG00000174501				45	0	0	27	3	10
BMS1P20	0	genome.wustl.edu	37	22	22664141	22664141	+	RNA	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	22	22664141	22664141	G	A	SNP	BMS1P20	ENST00000426066	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BMS1P20	HGNC	ENSG00000236850				135	1	0.735294	66	4	5.71429
PCDHA10	0	genome.wustl.edu	37	5	140237387	140237387	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	5	140237387	140237387	T	G	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	missense	c.1754	p.V585G	0.037	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120				23	0	0	4	2	33.3333
PCDHGC5	0	genome.wustl.edu	37	5	140869709	140869709	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	5	140869709	140869709	C	A	SNP	PCDHGC5	ENST00000252087	human	ensembl	74_37	+1	known	missense	c.902	p.A301E	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC5	HGNC	ENSG00000240764				231	0	0	102	11	9.73451
FAT2	0	genome.wustl.edu	37	5	150922741	150922741	+	Silent	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	5	150922741	150922741	C	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	silent	c.7947	p.L2649	0.996	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570				252	0	0	77	5	6.09756
MGAT1	0	genome.wustl.edu	37	5	180218745	180218745	+	Silent	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	5	180218745	180218745	C	T	SNP	MGAT1	ENST00000307826	human	ensembl	74_37	-1	known	silent	c.1227	p.S409	0.102	pfam_Glyco_trans_13	pfam_Glyco_trans_13	-	no_errors	MGAT1	HGNC	ENSG00000131446				64	0	0	8	26	76.4706
AGXT2	0	genome.wustl.edu	37	5	35033644	35033644	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	5	35033644	35033644	C	A	SNP	AGXT2	ENST00000231420	human	ensembl	74_37	-1	known	missense	c.596	p.G199V	0.998	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	-	no_errors	AGXT2	HGNC	ENSG00000113492				100	0	0	42	25	37.3134
BAI3	0	genome.wustl.edu	37	6	69349199	69349199	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	6	69349199	69349199	C	T	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.632	p.S211L	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				122	0	0	8	35	81.3953
SENP6	0	genome.wustl.edu	37	6	76376638	76376638	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	6	76376638	76376638	A	C	SNP	SENP6	ENST00000370014	human	ensembl	74_37	+1	known	missense	c.1205	p.K402T	1.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP6	HGNC	ENSG00000112701				93	0	0	41	6	12.766
HOXA3	0	genome.wustl.edu	37	7	27147975	27147975	+	Silent	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	7	27147975	27147975	G	A	SNP	HOXA3	ENST00000317201	human	ensembl	74_37	-1	known	silent	c.891	p.F297	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXA3	HGNC	ENSG00000105997				59	0	0	41	20	32.7869
ABCB1	0	genome.wustl.edu	37	7	87144608	87144608	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	7	87144608	87144608	C	A	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.3221	p.C1074F	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563				75	0	0	65	21	24.4186
TBC1D31	0	genome.wustl.edu	37	8	124094943	124094943	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	8	124094943	124094943	T	G	SNP	TBC1D31	ENST00000287380	human	ensembl	74_37	+1	known	missense	c.226	p.F76V	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_Rab-GTPase-TBC_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Rab-GTPase-TBC_dom,smart_WD40_repeat,pfscan_Rab-GTPase-TBC_dom,pfscan_WD40_repeat_dom	-	no_errors	TBC1D31	HGNC	ENSG00000156787				112	0	0	28	21	42.8571
POU5F1B	0	genome.wustl.edu	37	8	128428332	128428332	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	8	128428332	128428332	C	T	SNP	POU5F1B	ENST00000391675	human	ensembl	74_37	+1	known	missense	c.221	p.A74V	0.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU5F1B	HGNC	ENSG00000212993				30	0	0	16	6	27.2727
OC90	0	genome.wustl.edu	37	8	133045361	133045361	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	8	133045361	133045361	C	A	SNP	OC90	ENST00000443356	human	ensembl	74_37	-1	known	missense	c.832	p.V278F	0.000	NULL	pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom,prints_PLipase_A2	-	no_errors	OC90	Uniprot_gn	ENSG00000258417				26	0	0	8	3	27.2727
CCDC180	0	genome.wustl.edu	37	9	100053767	100053767	+	Silent	SNP	G	G	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	9	100053767	100053767	G	C	SNP	CCDC180	ENST00000357054	human	ensembl	74_37	+1	known	silent	c.84	p.G28	0.162	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816				144	0	0	59	40	40.404
NR5A1	0	genome.wustl.edu	37	9	127262899	127262899	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	9	127262899	127262899	G	A	SNP	NR5A1	ENST00000373588	human	ensembl	74_37	-1	known	missense	c.340	p.R114W	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,pirsf_Steroidogenic_factor_1	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pirsf_Steroidogenic_factor_1,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR5A1	HGNC	ENSG00000136931				38	0	0	22	12	35.2941
GLT6D1	0	genome.wustl.edu	37	9	138523289	138523289	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	9	138523289	138523289	C	A	SNP	GLT6D1	ENST00000371763	human	ensembl	74_37	-1	known	missense	c.107	p.W36L	0.995	pfam_Glyco_trans_6	pfam_Glyco_trans_6	-	no_errors	GLT6D1	HGNC	ENSG00000204007				173	0	0	52	38	42.2222
ZNF645	0	genome.wustl.edu	37	X	22291218	22291218	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	X	22291218	22291218	G	A	SNP	ZNF645	ENST00000323684	human	ensembl	74_37	+1	known	missense	c.110	p.R37H	0.000	NULL	pfscan_Znf_RING,pfscan_Znf_C2H2	-	no_errors	ZNF645	HGNC	ENSG00000175809				110	0	0	8	52	86.6667
TTF2	0	genome.wustl.edu	37	1	117640055	117640061	+	Frame_Shift_Del	DEL	GGTAATG	GGTAATG	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	GGTAATG	GGTAATG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	117640055	117640061	GGTAATG	-	DEL	TTF2	ENST00000369466	human	ensembl	74_37	+1	known	frame_shift_del	c.3269	p.W1090fs	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_Znf_GRF,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	TTF2	HGNC	ENSG00000116830				342	0	0	109	42	27.8146
MRPS21	0	genome.wustl.edu	37	1	150266866	150266875	+	Frame_Shift_Del	DEL	ACAGGTAACT	ACAGGTAACT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	ACAGGTAACT	ACAGGTAACT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	150266866	150266875	ACAGGTAACT	-	DEL	MRPS21	ENST00000309092	human	ensembl	74_37	+1	known	frame_shift_del	c.80_83	p.N27fs	1.000:1.000:1.000:1.000	pfam_Ribosomal_S21,tigrfam_Ribosomal_S21	pfam_Ribosomal_S21,tigrfam_Ribosomal_S21	-	no_errors	MRPS21	HGNC	ENSG00000187145				52	0	0	31	15	32.6087
SPTA1	0	genome.wustl.edu	37	1	158626436	158626436	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	158626436	158626436	T	-	DEL	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	frame_shift_del	c.2816	p.K939fs	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				362	0	0	171	9	5
RABGAP1L	0	genome.wustl.edu	37	1	174340152	174340153	+	Frame_Shift_Ins	INS	-	-	TGTC			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	174340152	174340153	-	TGTC	INS	RABGAP1L	ENST00000251507	human	ensembl	74_37	+1	known	frame_shift_ins	c.1501_1502	p.K503fs	1.000:1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1L	HGNC	ENSG00000152061				179	0	0	55	25	31.25
ASPM	0	genome.wustl.edu	37	1	197112645	197112657	+	Frame_Shift_Del	DEL	GTAGTAGATCGAC	GTAGTAGATCGAC	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	GTAGTAGATCGAC	GTAGTAGATCGAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	197112645	197112657	GTAGTAGATCGAC	-	DEL	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	frame_shift_del	c.737_725	p.R242fs	0.097:0.006:0.002:0.253:0.249:0.232:0.252:0.218:0.000:0.000:0.000:0.000:0.003	NULL	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279				281	0	0	151	31	17.033
ENAH	0	genome.wustl.edu	37	1	225755107	225755108	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	225755107	225755108	-	CT	INS	ENAH	ENST00000366844	human	ensembl	74_37	-1	known	frame_shift_ins	c.15_14	p.S5fs	1.000:1.000	pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	pfam_WH1/EVH1,pfam_VASP_tetra,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	ENAH	HGNC	ENSG00000154380				213	0	0	122	10	7.57576
MAP3K6	0	genome.wustl.edu	37	1	27683543	27683544	+	In_Frame_Ins	INS	-	-	AGT			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	27683543	27683544	-	AGT	INS	MAP3K6	ENST00000357582	human	ensembl	74_37	-1	known	in_frame_ins	c.3321_3320	p.1109in_frame_insL	1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K6	HGNC	ENSG00000142733				52	0	0	12	14	53.8462
C1orf177	0	genome.wustl.edu	37	1	55307376	55307381	+	Splice_Site	DEL	GTACCT	GTACCT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	GTACCT	GTACCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	55307376	55307381	GTACCT	-	DEL	C1orf177	ENST00000358193	human	ensembl	74_37	+1	known	splice_site_del	c.1245+1_6	e10+1	0.008:0.021:0.027:0.028:0.006:0.000	-	-	-	no_errors	C1orf177	HGNC	ENSG00000162398				95	0	0	47	20	29.8507
RERE	0	genome.wustl.edu	37	1	8415164	8415166	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	1	8415164	8415166	CTT	-	DEL	RERE	ENST00000337907	human	ensembl	74_37	-1	known	in_frame_del	c.4684_4682	p.E1561in_frame_del	1.000:1.000:1.000	pfam_Atrophin-like	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599				109	0	0	46	27	36.9863
TRIM8	0	genome.wustl.edu	37	10	104416942	104416943	+	Frame_Shift_Ins	INS	-	-	AGTG			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	10	104416942	104416943	-	AGTG	INS	TRIM8	ENST00000302424	human	ensembl	74_37	+1	known	frame_shift_ins	c.1487_1488	p.P498fs	1.000:1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TRIM8	HGNC	ENSG00000171206				48	0	0	14	18	56.25
ACBD5	0	genome.wustl.edu	37	10	27529251	27529252	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	10	27529251	27529252	-	C	INS	ACBD5	ENST00000375888	human	ensembl	74_37	-1	known	frame_shift_ins	c.172_171	p.N57fs	1.000:1.000	pfam_Acyl-CoA-binding_protein,superfamily_Acyl-CoA-binding_protein,pirsf_M-assoc_diazepam-bd-inh,prints_Acyl-CoA-binding_protein	pfam_Acyl-CoA-binding_protein,superfamily_Acyl-CoA-binding_protein,pirsf_M-assoc_diazepam-bd-inh,prints_Acyl-CoA-binding_protein	-	no_errors	ACBD5	HGNC	ENSG00000107897				106	0	0	49	25	33.7838
FZD8	0	genome.wustl.edu	37	10	35930230	35930237	+	Frame_Shift_Del	DEL	CACAGCGG	CACAGCGG	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CACAGCGG	CACAGCGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	10	35930230	35930237	CACAGCGG	-	DEL	FZD8	ENST00000374694	human	ensembl	74_37	-1	known	frame_shift_del	c.128_121	p.P41fs	1.000:1.000:1.000:1.000:1.000:0.965:1.000:1.000	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD8	HGNC	ENSG00000177283				42	0	0	17	14	45.1613
PTEN	0	genome.wustl.edu	37	10	89711879	89711880	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	10	89711879	89711880	-	A	INS	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	frame_shift_ins	c.497_498	p.T167fs	1.000:0.996	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862				326	0	0	37	46	55.4217
CELF1	0	genome.wustl.edu	37	11	47510448	47510451	+	Frame_Shift_Del	DEL	CCAT	CCAT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CCAT	CCAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	47510448	47510451	CCAT	-	DEL	CELF1	ENST00000532048	human	ensembl	74_37	-1	known	frame_shift_del	c.200_197	p.Y66fs	1.000:1.000:1.000:1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF1	HGNC	ENSG00000149187				311	0	0	126	57	31.1475
RTN4RL2	0	genome.wustl.edu	37	11	57243814	57243815	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	57243814	57243815	-	CT	INS	RTN4RL2	ENST00000335099	human	ensembl	74_37	+1	known	frame_shift_ins	c.693_694	p.Y232fs	1.000:1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	RTN4RL2	HGNC	ENSG00000186907				41	0	0	36	20	35.7143
UBXN1	0	genome.wustl.edu	37	11	62446163	62446165	+	In_Frame_Del	DEL	AGT	AGT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	AGT	AGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	62446163	62446165	AGT	-	DEL	UBXN1	ENST00000294119	human	ensembl	74_37	-1	known	in_frame_del	c.112_110	p.DW37in_frame_delG	1.000:1.000:1.000	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	pfam_UBX,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,smart_UBX,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_UBX	-	no_errors	UBXN1	HGNC	ENSG00000162191				39	0	0	18	12	40
PYGM	0	genome.wustl.edu	37	11	64514700	64514704	+	Frame_Shift_Del	DEL	CATGG	CATGG	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CATGG	CATGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	64514700	64514704	CATGG	-	DEL	PYGM	ENST00000164139	human	ensembl	74_37	-1	known	frame_shift_del	c.2308_2304	p.H768fs	1.000:0.992:1.000:1.000:1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGM	HGNC	ENSG00000068976				75	0	0	38	18	32.1429
KAT5	0	genome.wustl.edu	37	11	65480413	65480414	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	11	65480413	65480414	-	G	INS	KAT5	ENST00000341318	human	ensembl	74_37	+1	known	frame_shift_ins	c.268_269	p.V91fs	1.000:1.000	pfam_Tudor-knot,superfamily_Chromodomain-like,smart_Chromo_domain/shadow	pfam_MOZ_SAS,pfam_Tudor-knot,superfamily_Acyl_CoA_acyltransferase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow	-	no_errors	KAT5	HGNC	ENSG00000172977				146	0	0	58	42	42
ACACB	0	genome.wustl.edu	37	12	109637263	109637267	+	Frame_Shift_Del	DEL	CAGTC	CAGTC	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CAGTC	CAGTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	12	109637263	109637267	CAGTC	-	DEL	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	frame_shift_del	c.2684_2688	p.V896fs	1.000:0.902:0.982:1.000:0.999	superfamily_Single_hybrid_motif,pfscan_Biotin_lipoyl	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555				172	0	0	11	46	80.7018
EP400	0	genome.wustl.edu	37	12	132547135	132547136	+	In_Frame_Ins	INS	-	-	CAG			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	12	132547135	132547136	-	CAG	INS	EP400	ENST00000333577	human	ensembl	74_37	+1	known	in_frame_ins	c.8331_8332	p.2781in_frame_insQ	0.764:0.650	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				27	0	0	38	18	32.1429
FAM155A	0	genome.wustl.edu	37	13	108518687	108518689	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	13	108518687	108518689	CTG	-	DEL	FAM155A	ENST00000375915	human	ensembl	74_37	-1	known	in_frame_del	c.258_256	p.Q86in_frame_del	1.000:0.992:0.987	NULL	NULL	-	no_errors	FAM155A	HGNC	ENSG00000204442				24	0	0	67	9	11.8421
MTMR6	0	genome.wustl.edu	37	13	25840027	25840029	+	In_Frame_Del	DEL	ATT	ATT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	ATT	ATT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	13	25840027	25840029	ATT	-	DEL	MTMR6	ENST00000381801	human	ensembl	74_37	-1	known	in_frame_del	c.521_519	p.I174in_frame_del	1.000:0.999:0.653	pfam_Myotubularin-like_Pase_dom	pfam_Myotubularin-like_Pase_dom,smart_Tyr_Pase_cat	-	no_errors	MTMR6	HGNC	ENSG00000139505				308	0	0	139	10	6.71141
TTC7B	0	genome.wustl.edu	37	14	91247181	91247195	+	In_Frame_Del	DEL	CTTCTTTATAATCAC	CTTCTTTATAATCAC	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CTTCTTTATAATCAC	CTTCTTTATAATCAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	14	91247181	91247195	CTTCTTTATAATCAC	-	DEL	TTC7B	ENST00000357056	human	ensembl	74_37	-1	known	in_frame_del	c.346_332	p.GDYKE111in_frame_del	1.000:1.000:1.000:1.000:0.910:0.994:0.993:0.933:0.988:0.994:0.961:0.997:0.996:0.106:0.998	NULL	pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC7B	HGNC	ENSG00000165914				172	0	0	65	23	26.1364
DNM1P47	0	genome.wustl.edu	37	15	102292783	102292786	+	RNA	DEL	CTCA	CTCA	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CTCA	CTCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	15	102292783	102292786	CTCA	-	DEL	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000:0.999:0.997	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660				11	0	0	26	7	21.2121
MGA	0	genome.wustl.edu	37	15	41961590	41961590	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	15	41961590	41961590	T	-	DEL	MGA	ENST00000219905	human	ensembl	74_37	+1	known	frame_shift_del	c.498	p.H167fs	0.999	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				679	0	0	237	147	38.2812
MGA	0	genome.wustl.edu	37	15	42057159	42057188	+	In_Frame_Del	DEL	TAAAAGGTCCCCTATTCTCAGGACCAGTGG	TAAAAGGTCCCCTATTCTCAGGACCAGTGG	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	TAAAAGGTCCCCTATTCTCAGGACCAGTGG	TAAAAGGTCCCCTATTCTCAGGACCAGTGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	15	42057159	42057188	TAAAAGGTCCCCTATTCTCAGGACCAGTGG	-	DEL	MGA	ENST00000219905	human	ensembl	74_37	+1	known	in_frame_del	c.7820_7849	p.KGPLFSGPVV2608in_frame_del	0.979:0.979:1.000:1.000:1.000:1.000:1.000:0.990:0.998:0.991:0.043:0.027:0.310:0.306:0.467:0.571:0.570:0.922:0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				411	0	0	146	10	6.41026
SLC30A4	0	genome.wustl.edu	37	15	45777428	45777429	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	15	45777428	45777429	AT	-	DEL	SLC30A4	ENST00000261867	human	ensembl	74_37	-1	known	frame_shift_del	c.1223_1222	p.I408fs	1.000:1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A4	HGNC	ENSG00000104154				86	0	0	27	18	40
MCTP2	0	genome.wustl.edu	37	15	94883506	94883507	+	Splice_Site	INS	-	-	ACCG			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	15	94883506	94883507	-	ACCG	INS	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	splice_site_ins	c.857+2_857+1	e5+2	1.000:0.998	-	-	-	no_errors	MCTP2	HGNC	ENSG00000140563				249	0	0	67	23	25.5556
SEZ6L2	0	genome.wustl.edu	37	16	29883844	29883845	+	Frame_Shift_Ins	INS	-	-	TCAC			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	16	29883844	29883845	-	TCAC	INS	SEZ6L2	ENST00000308713	human	ensembl	74_37	-1	known	frame_shift_ins	c.2492_2491	p.T831fs	1.000:1.000	NULL	pfam_Sushi_SCR_CCP,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L2	HGNC	ENSG00000174938				125	0	0	68	29	29.8969
PAPD5	0	genome.wustl.edu	37	16	50258847	50258848	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	16	50258847	50258848	-	AG	INS	PAPD5	ENST00000436909	human	ensembl	74_37	+1	known	frame_shift_ins	c.1509_1510	p.D504fs	0.123:0.789	NULL	pfam_PAP_assoc,pfam_Nucleotidyltransferase	-	no_errors	PAPD5	HGNC	ENSG00000121274				278	0	0	109	51	31.875
PRPSAP2	0	genome.wustl.edu	37	17	18833952	18833977	+	Frame_Shift_Del	DEL	CGGATCCACAATGGGGAGTCCATGTC	CGGATCCACAATGGGGAGTCCATGTC	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CGGATCCACAATGGGGAGTCCATGTC	CGGATCCACAATGGGGAGTCCATGTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	18833952	18833977	CGGATCCACAATGGGGAGTCCATGTC	-	DEL	PRPSAP2	ENST00000268835	human	ensembl	74_37	+1	known	frame_shift_del	c.1051_1076	p.R351fs	1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.845:1.000:1.000:0.996:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	tigrfam_Rib-P_diPkinase	tigrfam_Rib-P_diPkinase	-	no_errors	PRPSAP2	HGNC	ENSG00000141127				110	0	0	35	11	23.913
NLK	0	genome.wustl.edu	37	17	26512205	26512210	+	In_Frame_Del	DEL	CCATCT	CCATCT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CCATCT	CCATCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	26512205	26512210	CCATCT	-	DEL	NLK	ENST00000407008	human	ensembl	74_37	+1	known	in_frame_del	c.1150_1155	p.PS384in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NLK	HGNC	ENSG00000087095				28	0	0	6	3	33.3333
SYNRG	0	genome.wustl.edu	37	17	35930790	35930791	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	35930790	35930791	-	C	INS	SYNRG	ENST00000339208	human	ensembl	74_37	-1	known	frame_shift_ins	c.1293_1292	p.G432fs	0.999:1.000	NULL	smart_EPS15_homology,pfscan_EPS15_homology	-	no_errors	SYNRG	HGNC	ENSG00000006114				87	0	0	35	25	41.6667
PSMD12	0	genome.wustl.edu	37	17	65341955	65341956	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	65341955	65341956	-	T	INS	PSMD12	ENST00000356126	human	ensembl	74_37	-1	known	frame_shift_ins	c.814_813	p.L271fs	1.000:0.999	NULL	pfam_PCI_dom,smart_PCI_dom	-	no_errors	PSMD12	HGNC	ENSG00000197170				127	0	0	49	16	24.6154
WDR16	0	genome.wustl.edu	37	17	9490044	9490045	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	17	9490044	9490045	-	AG	INS	WDR16	ENST00000299764	human	ensembl	74_37	+1	known	frame_shift_ins	c.330_331	p.L112fs	0.992:0.998	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR16	HGNC	ENSG00000166596				115	0	0	16	24	60
VAV1	0	genome.wustl.edu	37	19	6829798	6829799	+	Frame_Shift_Ins	INS	-	-	ATGC			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	19	6829798	6829799	-	ATGC	INS	VAV1	ENST00000602142	human	ensembl	74_37	+1	known	frame_shift_ins	c.1267_1268	p.F425fs	1.000:0.996	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH3_domain,prints_SH2,prints_SM22_calponin	-	no_errors	VAV1	HGNC	ENSG00000141968				246	0	0	34	33	49.2537
IFIH1	0	genome.wustl.edu	37	2	163133243	163133249	+	Frame_Shift_Del	DEL	TGGTGGG	TGGTGGG	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	TGGTGGG	TGGTGGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	163133243	163133249	TGGTGGG	-	DEL	IFIH1	ENST00000263642	human	ensembl	74_37	-1	known	frame_shift_del	c.2258_2252	p.A751fs	0.999:0.995:0.519:0.545:0.505:0.402:1.000	superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_CARD,superfamily_P-loop_NTPase,superfamily_DEATH-like_dom,superfamily_ARM-type_fold,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	IFIH1	HGNC	ENSG00000115267				251	0	0	93	28	23.1405
ABCA12	0	genome.wustl.edu	37	2	215843526	215843528	+	Splice_Site	DEL	ACC	ACC	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	ACC	ACC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	215843526	215843528	ACC	-	DEL	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	splice_site_del	c.4977+2_4977+1	e33-1	1.000:1.000:1.000	-	-	-	no_errors	ABCA12	HGNC	ENSG00000144452				152	0	0	55	43	43.8776
GBX2	0	genome.wustl.edu	37	2	237076315	237076316	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	237076315	237076316	GA	-	DEL	GBX2	ENST00000306318	human	ensembl	74_37	-1	known	frame_shift_del	c.300_299	p.L100fs	1.000:1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	GBX2	HGNC	ENSG00000168505				17	0	0	4	4	50
HDAC4	0	genome.wustl.edu	37	2	240078399	240078408	+	Frame_Shift_Del	DEL	GGTGGTTATA	GGTGGTTATA	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	GGTGGTTATA	GGTGGTTATA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	240078399	240078408	GGTGGTTATA	-	DEL	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	frame_shift_del	c.682_673	p.Y225fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024				120	0	0	56	21	27.2727
KIF1A	0	genome.wustl.edu	37	2	241713674	241713676	+	In_Frame_Del	DEL	ACC	ACC	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	ACC	ACC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	241713674	241713676	ACC	-	DEL	KIF1A	ENST00000498729	human	ensembl	74_37	-1	known	in_frame_del	c.963_961	p.G321in_frame_del	0.948:1.000:1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1A	HGNC	ENSG00000130294				58	0	0	11	6	35.2941
DYSF	0	genome.wustl.edu	37	2	71781054	71781055	+	Frame_Shift_Ins	INS	-	-	CCAG			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	71781054	71781055	-	CCAG	INS	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	frame_shift_ins	c.2141_2142	p.R715fs	0.987:0.985	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636				60	0	0	32	8	20
REG1P	0	genome.wustl.edu	37	2	79363175	79363176	+	RNA	INS	-	-	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	79363175	79363176	-	C	INS	REG1P	ENST00000377435	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	REG1P	HGNC	ENSG00000204787				38	0	0	17	8	32
KCMF1	0	genome.wustl.edu	37	2	85255125	85255133	+	In_Frame_Del	DEL	ACAAGGCAT	ACAAGGCAT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	ACAAGGCAT	ACAAGGCAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	2	85255125	85255133	ACAAGGCAT	-	DEL	KCMF1	ENST00000409785	human	ensembl	74_37	+1	known	in_frame_del	c.130_138	p.RHT45in_frame_del	1.000:1.000:0.975:1.000:1.000:1.000:1.000:1.000:1.000	pfam_Znf_ZZ,smart_Znf_ZZ,pfscan_Znf_ZZ	pfam_Znf_ZZ,pfam_Di19_Zn_binding,smart_Znf_ZZ,smart_Znf_C2H2-like,pfscan_Znf_ZZ,pfscan_Znf_C2H2	-	no_errors	KCMF1	HGNC	ENSG00000176407				122	0	0	37	9	19.5652
ACSS1	0	genome.wustl.edu	37	20	24995855	24995856	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	20	24995855	24995856	-	G	INS	ACSS1	ENST00000323482	human	ensembl	74_37	-1	known	frame_shift_ins	c.1258_1257	p.I419fs	0.998:0.531	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	-	no_errors	ACSS1	HGNC	ENSG00000154930				134	0	0	44	18	29.0323
PTK6	0	genome.wustl.edu	37	20	62161438	62161439	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	20	62161438	62161439	GG	-	DEL	PTK6	ENST00000217185	human	ensembl	74_37	-1	known	frame_shift_del	c.1161_1160	p.P387fs	0.970:1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	PTK6	HGNC	ENSG00000101213				66	0	0	54	18	25
MED15	0	genome.wustl.edu	37	22	20920813	20920814	+	In_Frame_Ins	INS	-	-	CAG			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	22	20920813	20920814	-	CAG	INS	MED15	ENST00000263205	human	ensembl	74_37	+1	known	in_frame_ins	c.750_751	p.254in_frame_insQ	0.993:0.998	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917				29	0	0	24	23	48.9362
TF	0	genome.wustl.edu	37	3	133485263	133485264	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	133485263	133485264	-	C	INS	TF	ENST00000402696	human	ensembl	74_37	+1	known	frame_shift_ins	c.1472_1473	p.H492fs	0.012:0.000	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	TF	HGNC	ENSG00000091513				241	0	0	126	167	56.9966
PAQR9	0	genome.wustl.edu	37	3	142681655	142681656	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	142681655	142681656	-	G	INS	PAQR9	ENST00000340634	human	ensembl	74_37	-1	known	frame_shift_ins	c.524_523	p.Y175fs	1.000:1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR9	HGNC	ENSG00000188582				33	0	0	45	9	16.6667
LXN	0	genome.wustl.edu	37	3	158390244	158390245	+	Frame_Shift_Ins	INS	-	-	TAGT			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	158390244	158390245	-	TAGT	INS	LXN	ENST00000264265	human	ensembl	74_37	-1	known	frame_shift_ins	c.24_23	p.Y8fs	0.876:0.774	pfam_Prot_inh_latexin,pirsf_Prot_inh_latexin	pfam_Prot_inh_latexin,pirsf_Prot_inh_latexin	-	no_errors	LXN	HGNC	ENSG00000079257				139	0	0	132	26	16.4557
SI	0	genome.wustl.edu	37	3	164786938	164786941	+	Frame_Shift_Del	DEL	AGTC	AGTC	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	AGTC	AGTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	164786938	164786941	AGTC	-	DEL	SI	ENST00000264382	human	ensembl	74_37	-1	known	frame_shift_del	c.301_298	p.D100fs	0.005:0.000:0.000:0.000	pfam_P_trefoil,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402				61	0	0	30	41	57.7465
GNB4	0	genome.wustl.edu	37	3	179132768	179132775	+	Frame_Shift_Del	DEL	ACATAATT	ACATAATT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	ACATAATT	ACATAATT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	179132768	179132775	ACATAATT	-	DEL	GNB4	ENST00000232564	human	ensembl	74_37	-1	known	frame_shift_del	c.335_328	p.N110fs	0.999:1.000:0.625:0.994:1.000:0.991:1.000:1.000	pirsf_Guanine_nucleotide-bd_bsu,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Gprotein_B,pfscan_WD40_repeat_dom	pirsf_Guanine_nucleotide-bd_bsu,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Gprotein_B,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GNB4	HGNC	ENSG00000114450				224	0	0	275	15	5.17241
KNG1	0	genome.wustl.edu	37	3	186449361	186449365	+	Frame_Shift_Del	DEL	TACAT	TACAT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	TACAT	TACAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	186449361	186449365	TACAT	-	DEL	KNG1	ENST00000265023	human	ensembl	74_37	+1	known	frame_shift_del	c.700_704	p.Y234fs	0.000:0.000:0.000:0.000:0.025	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat,prints_Kininogen	-	no_errors	KNG1	HGNC	ENSG00000113889				126	0	0	67	5	6.94444
TM4SF19	0	genome.wustl.edu	37	3	196051187	196051188	+	Frame_Shift_Ins	INS	-	-	TC			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	196051187	196051188	-	TC	INS	TM4SF19	ENST00000273695	human	ensembl	74_37	-1	known	frame_shift_ins	c.404_403	p.T135fs	1.000:1.000	pfam_L6_membrane	pfam_L6_membrane	-	no_errors	TM4SF19	HGNC	ENSG00000145107				129	0	0	53	63	54.3103
SGOL1	0	genome.wustl.edu	37	3	20202702	20202703	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	20202702	20202703	-	GA	INS	SGOL1	ENST00000263753	human	ensembl	74_37	-1	known	frame_shift_ins	c.1581_1580	p.P528fs	0.001:0.002	NULL	pfam_Shugoshin_N,pfam_Shugoshin_C	-	no_errors	SGOL1	HGNC	ENSG00000129810				49	0	0	3	19	86.3636
ARPP21	0	genome.wustl.edu	37	3	35723279	35723279	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	35723279	35723279	A	-	DEL	ARPP21	ENST00000417925	human	ensembl	74_37	+1	known	frame_shift_del	c.36	p.E13fs	0.572	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	ARPP21	HGNC	ENSG00000172995				70	0	0	40	21	34.4262
CACNA1D	0	genome.wustl.edu	37	3	53836195	53836209	+	Splice_Site	DEL	CATTAGGTATGTGCT	CATTAGGTATGTGCT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CATTAGGTATGTGCT	CATTAGGTATGTGCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	53836195	53836209	CATTAGGTATGTGCT	-	DEL	CACNA1D	ENST00000288139	human	ensembl	74_37	+1	known	splice_site_del	c.5495+7_5495+1	e45-1	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.976:1.000:1.000:0.025:0.001:0.000	-	-	-	no_errors	CACNA1D	HGNC	ENSG00000157388				386	0	0	15	18	54.5455
OGG1	0	genome.wustl.edu	37	3	9792006	9792007	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	3	9792006	9792007	-	C	INS	OGG1	ENST00000302036	human	ensembl	74_37	+1	known	frame_shift_ins	c.36_37	p.H12fs	0.002:0.987	tigrfam_Ogg	pfam_OGG_N,pfam_HhH-GPD_domain,superfamily_DNA_glycosylase,smart_HhH-GPD_domain,tigrfam_Ogg	-	no_errors	OGG1	HGNC	ENSG00000114026				36	0	0	10	38	79.1667
DHX15	0	genome.wustl.edu	37	4	24529563	24529564	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	4	24529563	24529564	-	CC	INS	DHX15	ENST00000336812	human	ensembl	74_37	-1	known	frame_shift_ins	c.2372_2371	p.E791fs	1.000:1.000	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606				165	0	0	37	19	33.9286
AASDH	0	genome.wustl.edu	37	4	57244590	57244591	+	Frame_Shift_Ins	INS	-	-	TATCA			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	4	57244590	57244591	-	TATCA	INS	AASDH	ENST00000205214	human	ensembl	74_37	-1	known	frame_shift_ins	c.392_391	p.T131fs	0.005:0.004	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_Acyl_carrier_prot-like,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Acyl_carrier_prot-like,smart_PQQ_beta_propeller_repeat,pfscan_Acyl_carrier_prot-like	-	no_errors	AASDH	HGNC	ENSG00000157426				105	0	0	55	12	17.9104
DIAPH1	0	genome.wustl.edu	37	5	140951490	140951492	+	Splice_Site	DEL	CAC	CAC	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	CAC	CAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	5	140951490	140951492	CAC	-	DEL	DIAPH1	ENST00000253811	human	ensembl	74_37	-1	known	splice_site_del	c.2473+1_2473+1	e17+1	1.000:1.000:1.000	-	-	-	no_errors	DIAPH1	HGNC	ENSG00000131504				232	0	0	15	42	73.6842
PAPD4	0	genome.wustl.edu	37	5	78981056	78981065	+	Frame_Shift_Del	DEL	ACAGTATACT	ACAGTATACT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	ACAGTATACT	ACAGTATACT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	5	78981056	78981065	ACAGTATACT	-	DEL	PAPD4	ENST00000296783	human	ensembl	74_37	+1	known	frame_shift_del	c.1415_1424	p.S473fs	1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000	NULL	pfam_PAP_assoc	-	no_errors	PAPD4	HGNC	ENSG00000164329				167	0	0	7	24	77.4194
WRNIP1	0	genome.wustl.edu	37	6	2783745	2783746	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	6	2783745	2783746	-	C	INS	WRNIP1	ENST00000380773	human	ensembl	74_37	+1	known	frame_shift_ins	c.1592_1593	p.L533fs	1.000:1.000	pfam_MgsA_C	pfam_MgsA_C,pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_ATPase_dyneun-rel_AAA,pfam_DUF815,pfam_IstB_ATP-bd,pfam_ATPase_AAA-2,superfamily_P-loop_NTPase,smart_Znf_Rad18_put,smart_AAA+_ATPase	-	no_errors	WRNIP1	HGNC	ENSG00000124535				37	0	0	27	13	32.5
HLA-E	0	genome.wustl.edu	37	6	30460197	30460198	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	6	30460197	30460198	-	T	INS	HLA-E	ENST00000376630	human	ensembl	74_37	+1	known	frame_shift_ins	c.1020_1021	p.Y340fs	0.002:0.004	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-E	HGNC	ENSG00000204592				173	0	0	97	49	33.5616
GABRR2	0	genome.wustl.edu	37	6	89977396	89977397	+	Splice_Site	DEL	AC	AC	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	6	89977396	89977397	AC	-	DEL	GABRR2	ENST00000602399	human	ensembl	74_37	-1	known	splice_site_del	c.811+1_811+1	e6+1	1.000:1.000	-	-	-	no_errors	GABRR2	HGNC	ENSG00000111886				147	0	0	11	22	66.6667
PLEKHA8	0	genome.wustl.edu	37	7	30089000	30089001	+	Splice_Site	INS	-	-	AA			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	7	30089000	30089001	-	AA	INS	PLEKHA8	ENST00000449726	human	ensembl	74_37	+1	known	splice_site_ins	c.597+2_597+1	e5+2	1.000:0.917	-	-	-	no_errors	PLEKHA8	HGNC	ENSG00000106086				163	0	0	62	50	44.6429
DOK2	0	genome.wustl.edu	37	8	21767077	21767078	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	8	21767077	21767078	-	G	INS	DOK2	ENST00000276420	human	ensembl	74_37	-1	known	frame_shift_ins	c.984_983	p.L329fs	1.000:1.000	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	DOK2	HGNC	ENSG00000147443				167	0	0	120	39	24.5283
ZNF395	0	genome.wustl.edu	37	8	28209226	28209228	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	8	28209226	28209228	GCA	-	DEL	ZNF395	ENST00000344423	human	ensembl	74_37	-1	known	in_frame_del	c.1019_1017	p.A341in_frame_del	0.082:0.295:0.411	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF395	HGNC	ENSG00000186918				100	0	0	202	13	6.04651
SGK223	0	genome.wustl.edu	37	8	8234868	8234869	+	In_Frame_Ins	INS	-	-	GCCGCT			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	8	8234868	8234869	-	GCCGCT	INS	SGK223	ENST00000330777	human	ensembl	74_37	-1	known	in_frame_ins	c.1051_1050	p.350in_frame_insSG	0.002:0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	SGK223	Uniprot_gn	ENSG00000182319				10	0	0	11	8	42.1053
OR1L8	0	genome.wustl.edu	37	9	125330644	125330650	+	Frame_Shift_Del	DEL	ACCAGGT	ACCAGGT	-			TCGA-CG-5725-01A-11D-1600-08	TCGA-CG-5725-11A-01D-1600-08	ACCAGGT	ACCAGGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	237e7e70-aa88-4bed-b032-318d262ea05b	15f67581-da8c-4ffc-9a81-9ae14fe3e2f1	9	125330644	125330650	ACCAGGT	-	DEL	OR1L8	ENST00000304865	human	ensembl	74_37	-1	known	frame_shift_del	c.113_107	p.Y36fs	0.767:0.019:0.247:0.983:0.991:0.999:0.999	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1L8	HGNC	ENSG00000171496				128	0	0	88	9	9.27835
