Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
KIF1B	0	genome.wustl.edu	37	1	10364070	10364070	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	10364070	10364070	C	T	SNP	KIF1B	ENST00000377083	human	ensembl	74_37	+1	known	missense	c.2827	p.R943W	0.427	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_FHA_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				160	0	0	136	47	25.6831
CASZ1	0	genome.wustl.edu	37	1	10700075	10700075	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	10700075	10700075	G	A	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	missense	c.4204	p.R1402C	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940				108	0	0	82	19	18.8119
CASZ1	0	genome.wustl.edu	37	1	10713999	10713999	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	10713999	10713999	C	T	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	silent	c.2115	p.L705	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940				67	0	0	81	7	7.95455
CASZ1	0	genome.wustl.edu	37	1	10720396	10720396	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	10720396	10720396	G	A	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	missense	c.703	p.R235W	0.928	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940				57	0	0	44	20	31.25
PRMT6	0	genome.wustl.edu	37	1	107599519	107599519	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	107599519	107599519	T	A	SNP	PRMT6	ENST00000370078	human	ensembl	74_37	+1	known	missense	c.182	p.I61N	0.997	pfam_Arg_MeTrfase	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_mo5U34_MeTrfas-like,pfam_Small_mtfrase_dom,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT6	HGNC	ENSG00000198890				46	0	0	43	5	10.4167
VAV3	0	genome.wustl.edu	37	1	108303435	108303435	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	108303435	108303435	G	A	SNP	VAV3	ENST00000370056	human	ensembl	74_37	-1	known	missense	c.988	p.R330C	0.988	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH3_domain,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH2,prints_SH3_domain,prints_SM22_calponin	-	no_errors	VAV3	HGNC	ENSG00000134215				84	0	0	71	15	17.4419
AMPD2	0	genome.wustl.edu	37	1	110173650	110173650	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	110173650	110173650	G	A	SNP	AMPD2	ENST00000256578	human	ensembl	74_37	+1	known	missense	c.2516	p.R839H	1.000	pirsf_AMP_deaminase,tigrfam_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD2	HGNC	ENSG00000116337				25	0	0	20	8	28.5714
KCNA3	0	genome.wustl.edu	37	1	111217053	111217053	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	111217053	111217053	C	T	SNP	KCNA3	ENST00000369769	human	ensembl	74_37	-1	known	missense	c.379	p.E127K	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv1.3	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.3,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA3	HGNC	ENSG00000177272				81	0	0	63	12	16
CHIA	0	genome.wustl.edu	37	1	111857901	111857901	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	111857901	111857901	C	T	SNP	CHIA	ENST00000343320	human	ensembl	74_37	+1	known	silent	c.324	p.A108	0.994	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,pfam_Chitin-bd_dom,superfamily_Glycoside_hydrolase_SF,superfamily_Chitin-bd_dom,smart_Chitinase_II,smart_Chitin-bd_dom,pfscan_Chitin-bd_dom	-	no_errors	CHIA	HGNC	ENSG00000134216				316	0	0	261	58	18.1818
DDX20	0	genome.wustl.edu	37	1	112305362	112305362	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	112305362	112305362	T	C	SNP	DDX20	ENST00000369702	human	ensembl	74_37	+1	known	missense	c.1168	p.W390R	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX20	HGNC	ENSG00000064703				210	0	0	218	15	6.43777
DENND2C	0	genome.wustl.edu	37	1	115129947	115129947	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	115129947	115129947	C	T	SNP	DENND2C	ENST00000481894	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.322	-	-	-	no_errors	DENND2C	HGNC	ENSG00000175984				180	0	0	124	47	27.4854
VANGL1	0	genome.wustl.edu	37	1	116206712	116206712	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	116206712	116206712	G	A	SNP	VANGL1	ENST00000310260	human	ensembl	74_37	+1	known	missense	c.635	p.R212Q	0.983	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL1	HGNC	ENSG00000173218				323	0	0	233	62	21.0169
NOTCH2	0	genome.wustl.edu	37	1	120465373	120465373	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	120465373	120465373	G	A	SNP	NOTCH2	ENST00000256646	human	ensembl	74_37	-1	known	missense	c.4888	p.R1630C	1.000	pirsf_Notch,pfam_Notch_NODP_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250				247	1	0.403226	175	36	17.0616
CCNL2	0	genome.wustl.edu	37	1	1326184	1326184	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	1326184	1326184	C	T	SNP	CCNL2	ENST00000400809	human	ensembl	74_37	-1	known	missense	c.721	p.A241T	1.000	pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	-	no_errors	CCNL2	HGNC	ENSG00000221978				143	0	0	87	21	19.4444
PPIAL4G	0	genome.wustl.edu	37	1	143767651	143767651	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	143767651	143767651	G	A	SNP	PPIAL4G	ENST00000419275	human	ensembl	74_37	-1	known	silent	c.198	p.D66	1.000	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIAL4G	HGNC	ENSG00000236334				504	0	0	461	64	12.1905
PDE4DIP	0	genome.wustl.edu	37	1	145015864	145015864	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	145015864	145015864	T	C	SNP	PDE4DIP	ENST00000313382	human	ensembl	74_37	-1	known	missense	c.224	p.E75G	1.000	pfam_Spindle_assoc	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				1650	1	0.0605694	1451	86	5.59532
HIST2H3D	0	genome.wustl.edu	37	1	149784833	149784833	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	149784833	149784833	C	T	SNP	HIST2H3D	ENST00000331491	human	ensembl	74_37	-1	known	missense	c.404	p.R135Q	1.000	superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST2H3D	HGNC	ENSG00000183598				93	0	0	77	18	18.9474
OTUD7B	0	genome.wustl.edu	37	1	149935967	149935967	+	RNA	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	149935967	149935967	T	C	SNP	OTUD7B	ENST00000479905	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	OTUD7B	HGNC	ENSG00000163113				11	0	0	13	4	23.5294
CERS2	0	genome.wustl.edu	37	1	150940936	150940936	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	150940936	150940936	G	A	SNP	CERS2	ENST00000271688	human	ensembl	74_37	-1	known	silent	c.226	p.L76	0.999	superfamily_Homeodomain-like,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_Homeobox_dom	pfam_TLC-dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom,pfscan_Homeobox_dom	-	no_errors	CERS2	HGNC	ENSG00000143418				60	0	0	69	6	8
ANXA9	0	genome.wustl.edu	37	1	150959137	150959137	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	150959137	150959137	G	T	SNP	ANXA9	ENST00000368947	human	ensembl	74_37	+1	known	missense	c.612	p.Q204H	0.993	pfam_Annexin_repeat	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinXXXI	-	no_errors	ANXA9	HGNC	ENSG00000143412				102	0	0	72	7	8.86076
FAM63A	0	genome.wustl.edu	37	1	150971889	150971889	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	150971889	150971889	C	T	SNP	FAM63A	ENST00000361738	human	ensembl	74_37	-1	known	missense	c.1081	p.V361I	1.000	NULL	pfam_DUF544	-	no_errors	FAM63A	HGNC	ENSG00000143409				349	0	0	298	61	16.9916
PIP5K1A	0	genome.wustl.edu	37	1	151206963	151206963	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	151206963	151206963	T	C	SNP	PIP5K1A	ENST00000368888	human	ensembl	74_37	+1	known	silent	c.930	p.R310	0.976	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5K1A	HGNC	ENSG00000143398				186	0	0	149	32	17.6796
ZNF687	0	genome.wustl.edu	37	1	151259493	151259493	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	151259493	151259493	C	T	SNP	ZNF687	ENST00000324048	human	ensembl	74_37	+1	known	silent	c.726	p.S242	0.011	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF687	HGNC	ENSG00000143373				133	0	0	141	16	10.1911
RORC	0	genome.wustl.edu	37	1	151785515	151785515	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	151785515	151785515	C	T	SNP	RORC	ENST00000392697	human	ensembl	74_37	-1	known	missense	c.1355	p.S452N	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_ROR_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	RORC	HGNC	ENSG00000143365				81	0	0	57	23	28.75
SNAPIN	0	genome.wustl.edu	37	1	153631418	153631418	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	153631418	153631418	G	A	SNP	SNAPIN	ENST00000474959	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.208	-	-	-	no_errors	SNAPIN	HGNC	ENSG00000143553				22	0	0	15	8	34.7826
KAZN	0	genome.wustl.edu	37	1	15386668	15386668	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	15386668	15386668	C	T	SNP	KAZN	ENST00000376030	human	ensembl	74_37	+1	known	missense	c.917	p.A306V	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	KAZN	HGNC	ENSG00000189337				97	0	0	75	23	23.4694
NUP210L	0	genome.wustl.edu	37	1	154042791	154042791	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	154042791	154042791	T	C	SNP	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	missense	c.2512	p.M838V	0.973	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552				272	0	0	231	43	15.6934
ZBTB7B	0	genome.wustl.edu	37	1	154987838	154987838	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	154987838	154987838	G	T	SNP	ZBTB7B	ENST00000417934	human	ensembl	74_37	+1	known	missense	c.804	p.E268D	0.997	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7B	HGNC	ENSG00000160685				37	0	0	27	9	25
YY1AP1	0	genome.wustl.edu	37	1	155629928	155629928	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	155629928	155629928	G	A	SNP	YY1AP1	ENST00000368339	human	ensembl	74_37	-1	known	silent	c.2187	p.A729	1.000	NULL	NULL	-	no_errors	YY1AP1	HGNC	ENSG00000163374				78	0	0	69	21	23.3333
GON4L	0	genome.wustl.edu	37	1	155726824	155726824	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	155726824	155726824	C	T	SNP	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	silent	c.5442	p.E1814	0.989	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580				129	0	0	105	25	19.2308
MEX3A	0	genome.wustl.edu	37	1	156047022	156047022	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	156047022	156047022	G	A	SNP	MEX3A	ENST00000532414	human	ensembl	74_37	-1	known	silent	c.906	p.N302	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3A	HGNC	ENSG00000254726				92	0	0	78	16	17.0213
PAQR6	0	genome.wustl.edu	37	1	156215053	156215053	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	156215053	156215053	G	A	SNP	PAQR6	ENST00000470198	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.149	-	-	-	no_errors	PAQR6	HGNC	ENSG00000160781				50	0	0	49	10	16.9492
MIB2	0	genome.wustl.edu	37	1	1563724	1563724	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	1563724	1563724	T	C	SNP	MIB2	ENST00000505820	human	ensembl	74_37	+1	known	missense	c.2258	p.L753P	0.969	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Mib_Herc2,pfam_Ankyrin_rpt,pfam_Znf_ZZ,superfamily_Ankyrin_rpt-contain_dom,smart_Znf_ZZ,smart_Ankyrin_rpt,smart_Znf_RING,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_RING,pfscan_Znf_ZZ,prints_Ankyrin_rpt	-	no_errors	MIB2	HGNC	ENSG00000197530				25	0	0	23	9	28.125
BCAN	0	genome.wustl.edu	37	1	156616629	156616629	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	156616629	156616629	C	T	SNP	BCAN	ENST00000329117	human	ensembl	74_37	+1	known	missense	c.128	p.A43V	0.033	pfam_Ig_V-set,smart_Ig_sub	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,prints_Link,prints_AntifreezeII,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom	-	no_errors	BCAN	HGNC	ENSG00000132692				38	0	0	39	8	17.0213
BCAN	0	genome.wustl.edu	37	1	156621265	156621265	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	156621265	156621265	G	A	SNP	BCAN	ENST00000329117	human	ensembl	74_37	+1	known	missense	c.1081	p.A361T	0.992	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,prints_Link,prints_AntifreezeII,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom	-	no_errors	BCAN	HGNC	ENSG00000132692				74	0	0	55	13	19.1176
NES	0	genome.wustl.edu	37	1	156641614	156641614	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	156641614	156641614	T	G	SNP	NES	ENST00000368223	human	ensembl	74_37	-1	known	missense	c.2366	p.K789T	0.000	NULL	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688				196	0	0	134	46	25.5556
HDGF	0	genome.wustl.edu	37	1	156713188	156713188	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	156713188	156713188	G	A	SNP	HDGF	ENST00000465180	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HDGF	HGNC	ENSG00000143321				110	0	0	100	12	10.7143
INSRR	0	genome.wustl.edu	37	1	156821927	156821927	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	156821927	156821927	C	T	SNP	INSRR	ENST00000368195	human	ensembl	74_37	-1	known	missense	c.694	p.E232K	0.980	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Furin-like_Cys-rich_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSRR	HGNC	ENSG00000027644				54	0	0	41	12	22.6415
CD5L	0	genome.wustl.edu	37	1	157803265	157803265	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	157803265	157803265	G	T	SNP	CD5L	ENST00000368174	human	ensembl	74_37	-1	known	silent	c.756	p.L252	0.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD5L	HGNC	ENSG00000073754				164	0	0	129	20	13.4228
KIRREL	0	genome.wustl.edu	37	1	158063221	158063221	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	158063221	158063221	C	T	SNP	KIRREL	ENST00000368173	human	ensembl	74_37	+1	known	missense	c.1612	p.R538W	1.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL	HGNC	ENSG00000183853				123	0	0	102	35	25.5474
AGMAT	0	genome.wustl.edu	37	1	15905525	15905525	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	15905525	15905525	G	A	SNP	AGMAT	ENST00000375826	human	ensembl	74_37	-1	known	silent	c.549	p.H183	0.259	pfam_Ureohydrolase,tigrfam_Agmatinase-rel	pfam_Ureohydrolase,prints_Ureohydrolase,tigrfam_Agmatinase-rel	-	no_errors	AGMAT	HGNC	ENSG00000116771				48	0	0	47	9	16.0714
CASQ1	0	genome.wustl.edu	37	1	160165298	160165298	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	160165298	160165298	C	A	SNP	CASQ1	ENST00000368078	human	ensembl	74_37	+1	known	missense	c.625	p.P209T	1.000	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	-	no_errors	CASQ1	HGNC	ENSG00000143318				83	0	0	89	21	19.0909
ARHGAP30	0	genome.wustl.edu	37	1	161026241	161026241	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	161026241	161026241	G	A	SNP	ARHGAP30	ENST00000368013	human	ensembl	74_37	-1	known	silent	c.282	p.C94	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP30	HGNC	ENSG00000186517				36	0	0	37	13	26
FCRLB	0	genome.wustl.edu	37	1	161697329	161697329	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	161697329	161697329	C	T	SNP	FCRLB	ENST00000367948	human	ensembl	74_37	+1	known	silent	c.1158	p.S386	0.989	NULL	smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	FCRLB	HGNC	ENSG00000162746				72	0	0	67	12	15.1899
SPEN	0	genome.wustl.edu	37	1	16199371	16199371	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	16199371	16199371	T	C	SNP	SPEN	ENST00000375759	human	ensembl	74_37	+1	known	silent	c.144	p.A48	0.995	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526				121	1	0.819672	90	22	19.6429
SPEN	0	genome.wustl.edu	37	1	16261133	16261133	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	16261133	16261133	G	A	SNP	SPEN	ENST00000375759	human	ensembl	74_37	+1	known	missense	c.8398	p.A2800T	0.003	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526				71	0	0	54	4	6.89655
CLCNKB	0	genome.wustl.edu	37	1	16377403	16377403	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	16377403	16377403	G	A	SNP	CLCNKB	ENST00000375679	human	ensembl	74_37	+1	known	missense	c.1087	p.D363N	0.995	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-K	-	no_errors	CLCNKB	HGNC	ENSG00000184908				65	0	0	42	8	16
CLCNKB	0	genome.wustl.edu	37	1	16378782	16378782	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	16378782	16378782	C	T	SNP	CLCNKB	ENST00000375679	human	ensembl	74_37	+1	known	missense	c.1498	p.P500S	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-K	-	no_errors	CLCNKB	HGNC	ENSG00000184908				60	0	0	82	20	19.6078
PBX1	0	genome.wustl.edu	37	1	164768972	164768972	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	164768972	164768972	C	A	SNP	PBX1	ENST00000420696	human	ensembl	74_37	+1	known	missense	c.547	p.L183M	1.000	pfam_PBX	pfam_PBX,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	PBX1	HGNC	ENSG00000185630				86	0	0	94	8	7.84314
LMX1A	0	genome.wustl.edu	37	1	165182974	165182974	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	165182974	165182974	G	A	SNP	LMX1A	ENST00000294816	human	ensembl	74_37	-1	known	silent	c.573	p.D191	0.997	superfamily_Homeodomain-like	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LMX1A	HGNC	ENSG00000162761				371	0	0	319	54	14.4772
GPA33	0	genome.wustl.edu	37	1	167024259	167024259	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	167024259	167024259	A	G	SNP	GPA33	ENST00000367868	human	ensembl	74_37	-1	known	missense	c.781	p.C261R	0.537	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	GPA33	HGNC	ENSG00000143167				113	0	0	95	22	18.8034
ADCY10	0	genome.wustl.edu	37	1	167792355	167792355	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	167792355	167792355	C	T	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	silent	c.4059	p.P1353	0.000	pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199				97	0	0	57	18	24
GPR161	0	genome.wustl.edu	37	1	168054846	168054846	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	168054846	168054846	T	C	SNP	GPR161	ENST00000537209	human	ensembl	74_37	-1	known	missense	c.1573	p.S525G	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR161	HGNC	ENSG00000143147				209	2	0.947867	173	40	18.7793
ATP13A2	0	genome.wustl.edu	37	1	17314702	17314702	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	17314702	17314702	C	T	SNP	ATP13A2	ENST00000326735	human	ensembl	74_37	-1	known	silent	c.2790	p.S930	0.035	tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A2	HGNC	ENSG00000159363				96	0	0	95	21	18.1034
SDHB	0	genome.wustl.edu	37	1	17371343	17371343	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	17371343	17371343	C	T	SNP	SDHB	ENST00000375499	human	ensembl	74_37	-1	known	missense	c.113	p.R38H	1.000	superfamily_2Fe-2S_ferredoxin-type	superfamily_Helical_ferredxn,superfamily_2Fe-2S_ferredoxin-type,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Succ_DH/fum_Rdtase_Fe-S	-	no_errors	SDHB	HGNC	ENSG00000117118				113	0	0	86	21	19.6262
TNR	0	genome.wustl.edu	37	1	175372559	175372559	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	175372559	175372559	G	A	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	silent	c.693	p.S231	0.000	smart_EG-like_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147				198	0	0	156	27	14.7541
PAPPA2	0	genome.wustl.edu	37	1	176525653	176525653	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	176525653	176525653	T	G	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.195	p.H65Q	1.000	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183				272	0	0	216	58	21.1679
PAPPA2	0	genome.wustl.edu	37	1	176659457	176659457	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	176659457	176659457	C	T	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	silent	c.2322	p.T774	0.011	pfam_Peptidase_M43	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183				208	0	0	159	33	17.1875
ASTN1	0	genome.wustl.edu	37	1	177001708	177001708	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	177001708	177001708	C	T	SNP	ASTN1	ENST00000367654	human	ensembl	74_37	-1	known	missense	c.749	p.R250H	1.000	NULL	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092				128	1	0.775194	116	30	20.5479
TOR3A	0	genome.wustl.edu	37	1	179057302	179057302	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	179057302	179057302	C	T	SNP	TOR3A	ENST00000495145	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TOR3A	HGNC	ENSG00000186283				36	0	0	45	13	22.4138
LHX4	0	genome.wustl.edu	37	1	180243505	180243505	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	180243505	180243505	T	C	SNP	LHX4	ENST00000263726	human	ensembl	74_37	+1	known	missense	c.964	p.S322P	0.979	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX4	HGNC	ENSG00000121454				373	0	0	316	89	21.9753
MR1	0	genome.wustl.edu	37	1	181018395	181018395	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	181018395	181018395	A	G	SNP	MR1	ENST00000367580	human	ensembl	74_37	+1	known	missense	c.275	p.Q92R	1.000	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,prints_MHC_I_a	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	MR1	HGNC	ENSG00000153029				53	0	0	32	12	27.2727
RNASEL	0	genome.wustl.edu	37	1	182555837	182555837	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	182555837	182555837	G	A	SNP	RNASEL	ENST00000367559	human	ensembl	74_37	-1	known	silent	c.105	p.N35	0.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_KEN_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_PUG-dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	RNASEL	HGNC	ENSG00000135828				234	0	0	149	48	24.3655
COLGALT2	0	genome.wustl.edu	37	1	183920195	183920195	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	183920195	183920195	C	T	SNP	COLGALT2	ENST00000361927	human	ensembl	74_37	-1	known	missense	c.1082	p.R361H	1.000	pfam_Glyco_trans_25	pfam_Glyco_trans_25	-	no_errors	COLGALT2	HGNC	ENSG00000198756				340	0	0	237	69	22.549
HMCN1	0	genome.wustl.edu	37	1	185962394	185962394	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	185962394	185962394	C	T	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.3458	p.T1153I	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				183	0	0	110	34	23.6111
HMCN1	0	genome.wustl.edu	37	1	186114613	186114613	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	186114613	186114613	G	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.14345	p.R4782H	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				123	0	0	85	23	21.2963
BRINP3	0	genome.wustl.edu	37	1	190067293	190067293	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	190067293	190067293	C	T	SNP	BRINP3	ENST00000367462	human	ensembl	74_37	-1	known	missense	c.2156	p.R719H	0.997	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP3	HGNC	ENSG00000162670				207	0	0	157	46	22.6601
CDC73	0	genome.wustl.edu	37	1	193205392	193205392	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	193205392	193205392	C	T	SNP	CDC73	ENST00000367435	human	ensembl	74_37	+1	known	silent	c.1323	p.R441	0.146	pfam_RNA_pol_access_fac_Cdc73	pfam_RNA_pol_access_fac_Cdc73	-	no_errors	CDC73	HGNC	ENSG00000134371				260	0	0	196	61	23.7354
ZNF281	0	genome.wustl.edu	37	1	200377909	200377909	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	200377909	200377909	T	G	SNP	ZNF281	ENST00000294740	human	ensembl	74_37	-1	known	missense	c.925	p.K309Q	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF281	HGNC	ENSG00000162702				476	0	0	332	92	21.6981
DDX59	0	genome.wustl.edu	37	1	200635401	200635401	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	200635401	200635401	A	G	SNP	DDX59	ENST00000331314	human	ensembl	74_37	-1	known	silent	c.468	p.S156	0.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197				204	0	0	148	42	22.1053
LAD1	0	genome.wustl.edu	37	1	201356058	201356058	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	201356058	201356058	C	T	SNP	LAD1	ENST00000367313	human	ensembl	74_37	-1	known	missense	c.473	p.R158Q	0.141	pirsf_Ladinin_1	pirsf_Ladinin_1	-	no_errors	LAD1	HGNC	ENSG00000159166				168	0	0	159	19	10.6742
KDM5B	0	genome.wustl.edu	37	1	202722105	202722105	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	202722105	202722105	C	T	SNP	KDM5B	ENST00000367264	human	ensembl	74_37	-1	known	silent	c.1737	p.V579	0.998	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5B	HGNC	ENSG00000117139				121	0	0	89	23	20.5357
MDM4	0	genome.wustl.edu	37	1	204518448	204518448	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	204518448	204518448	G	A	SNP	MDM4	ENST00000367182	human	ensembl	74_37	+1	known	missense	c.1111	p.V371I	1.000	pirsf_p53_neg-reg_MDM_2/4	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,pirsf_p53_neg-reg_MDM_2/4,pfscan_Znf_RanBP2,pfscan_Znf_RING	-	no_errors	MDM4	HGNC	ENSG00000198625				225	0	0	187	64	25.498
CNTN2	0	genome.wustl.edu	37	1	205031109	205031109	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	205031109	205031109	G	A	SNP	CNTN2	ENST00000331830	human	ensembl	74_37	+1	known	missense	c.1090	p.G364R	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN2	HGNC	ENSG00000184144				35	0	0	37	15	28.8462
TMEM81	0	genome.wustl.edu	37	1	205053001	205053001	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	205053001	205053001	C	T	SNP	TMEM81	ENST00000367167	human	ensembl	74_37	-1	known	missense	c.448	p.A150T	0.000	pfscan_Ig-like_dom	pfscan_Ig-like_dom	-	no_errors	TMEM81	HGNC	ENSG00000174529				172	0	0	157	10	5.98802
PIGR	0	genome.wustl.edu	37	1	207111045	207111045	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	207111045	207111045	G	A	SNP	PIGR	ENST00000356495	human	ensembl	74_37	-1	known	missense	c.440	p.T147M	0.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PIGR	HGNC	ENSG00000162896				36	0	0	31	11	26.1905
CR1	0	genome.wustl.edu	37	1	207787753	207787753	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	207787753	207787753	C	T	SNP	CR1	ENST00000367049	human	ensembl	74_37	+1	known	nonsense	c.6580	p.R2194*	0.477	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710				91	0	0	104	7	6.30631
CR1	0	genome.wustl.edu	37	1	207787831	207787831	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	207787831	207787831	G	T	SNP	CR1	ENST00000367049	human	ensembl	74_37	+1	known	nonsense	c.6658	p.E2220*	1.000	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710				82	0	0	102	8	7.27273
LAMB3	0	genome.wustl.edu	37	1	209803987	209803987	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	209803987	209803987	C	T	SNP	LAMB3	ENST00000356082	human	ensembl	74_37	-1	known	missense	c.916	p.E306K	0.999	smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB3	HGNC	ENSG00000196878				80	0	0	44	25	36.2319
TRAF3IP3	0	genome.wustl.edu	37	1	209933427	209933427	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	209933427	209933427	T	C	SNP	TRAF3IP3	ENST00000367024	human	ensembl	74_37	+1	known	missense	c.43	p.W15R	0.025	NULL	NULL	-	no_errors	TRAF3IP3	HGNC	ENSG00000009790				38	0	0	45	7	13.4615
SH2D5	0	genome.wustl.edu	37	1	21051063	21051063	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	21051063	21051063	C	T	SNP	SH2D5	ENST00000444387	human	ensembl	74_37	-1	known	silent	c.456	p.E152	1.000	smart_PTB/PI_dom	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_SH2	-	no_errors	SH2D5	HGNC	ENSG00000189410				18	0	0	15	6	28.5714
HHAT	0	genome.wustl.edu	37	1	210637863	210637863	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	210637863	210637863	G	A	SNP	HHAT	ENST00000391905	human	ensembl	74_37	+1	known	missense	c.871	p.A291T	1.000	pfam_MBOAT_fam	pfam_MBOAT_fam	-	no_errors	HHAT	HGNC	ENSG00000054392				386	0	0	293	79	21.2366
RCOR3	0	genome.wustl.edu	37	1	211444604	211444604	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	211444604	211444604	G	T	SNP	RCOR3	ENST00000367005	human	ensembl	74_37	+1	known	missense	c.80	p.G27V	1.000	pfam_ELM2_dom,pfscan_ELM2_dom	pfam_SANT/Myb,pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	RCOR3	HGNC	ENSG00000117625				150	0	0	141	18	11.3208
RPS6KC1	0	genome.wustl.edu	37	1	213445950	213445950	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	213445950	213445950	T	C	SNP	RPS6KC1	ENST00000366960	human	ensembl	74_37	+1	known	silent	c.3174	p.P1058	0.999	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_MIT,pfam_Phox,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Phox,smart_Phox,smart_MIT,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Phox,pfscan_Prot_kinase_dom	-	no_errors	RPS6KC1	HGNC	ENSG00000136643				137	0	0	90	26	22.4138
PTPN14	0	genome.wustl.edu	37	1	214638039	214638039	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	214638039	214638039	C	T	SNP	PTPN14	ENST00000366956	human	ensembl	74_37	-1	known	silent	c.108	p.T36	0.018	pfam_FERM_N,smart_Band_41_domain,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN14	HGNC	ENSG00000152104				95	0	0	81	8	8.98876
ESRRG	0	genome.wustl.edu	37	1	216850489	216850489	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	216850489	216850489	A	G	SNP	ESRRG	ENST00000408911	human	ensembl	74_37	-1	known	missense	c.401	p.I134T	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	ESRRG	HGNC	ENSG00000196482				209	0	0	162	49	23.2227
GPATCH2	0	genome.wustl.edu	37	1	217671577	217671577	+	RNA	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	217671577	217671577	C	A	SNP	GPATCH2	ENST00000485274	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	GPATCH2	HGNC	ENSG00000092978				131	0	0	93	27	22.5
ALPL	0	genome.wustl.edu	37	1	21890655	21890655	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	21890655	21890655	C	T	SNP	ALPL	ENST00000374832	human	ensembl	74_37	+1	known	silent	c.594	p.S198	1.000	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPL	HGNC	ENSG00000162551				63	0	0	57	7	10.9375
HSPG2	0	genome.wustl.edu	37	1	22206641	22206641	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	22206641	22206641	C	A	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.2302	p.G768C	1.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				64	0	0	74	14	15.9091
DISP1	0	genome.wustl.edu	37	1	223176686	223176686	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	223176686	223176686	C	T	SNP	DISP1	ENST00000284476	human	ensembl	74_37	+1	novel	silent	c.1947	p.V649	1.000	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	DISP1	HGNC	ENSG00000154309				247	0	0	197	44	18.2573
DISP1	0	genome.wustl.edu	37	1	223178672	223178672	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	223178672	223178672	C	T	SNP	DISP1	ENST00000284476	human	ensembl	74_37	+1	novel	silent	c.3933	p.G1311	0.000	NULL	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	DISP1	HGNC	ENSG00000154309				185	0	0	142	33	18.8571
SKI	0	genome.wustl.edu	37	1	2237529	2237529	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	2237529	2237529	G	A	SNP	SKI	ENST00000378536	human	ensembl	74_37	+1	known	missense	c.1838	p.R613Q	1.000	NULL	pfam_c-SKI_SMAD4-bd_dom,pfam_Transform_Ski,superfamily_SAND_dom-like,superfamily_DNA-bd_dom_put	-	no_errors	SKI	HGNC	ENSG00000157933				8	0	0	6	4	40
ADCK3	0	genome.wustl.edu	37	1	227171262	227171262	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	227171262	227171262	G	A	SNP	ADCK3	ENST00000366777	human	ensembl	74_37	+1	known	missense	c.1090	p.V364M	0.999	pfam_UbiB_dom,superfamily_Kinase-like_dom	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK3	HGNC	ENSG00000163050				97	0	0	75	22	22.6804
OBSCN	0	genome.wustl.edu	37	1	228466971	228466971	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	228466971	228466971	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.7222	p.R2408W	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				71	0	0	52	9	14.7541
OBSCN	0	genome.wustl.edu	37	1	228495060	228495060	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	228495060	228495060	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	silent	c.12294	p.A4098	0.006	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				42	0	0	21	14	40
ACTA1	0	genome.wustl.edu	37	1	229568041	229568041	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	229568041	229568041	G	A	SNP	ACTA1	ENST00000366684	human	ensembl	74_37	-1	known	missense	c.592	p.R198C	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTA1	HGNC	ENSG00000143632				27	0	0	25	8	24.2424
URB2	0	genome.wustl.edu	37	1	229772467	229772467	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	229772467	229772467	G	A	SNP	URB2	ENST00000258243	human	ensembl	74_37	+1	known	missense	c.2107	p.D703N	0.167	NULL	pfam_Urb2/Npa2_C	-	no_errors	URB2	HGNC	ENSG00000135763				378	0	0	270	37	12.0521
SIPA1L2	0	genome.wustl.edu	37	1	232649957	232649957	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	232649957	232649957	A	G	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.1129	p.C377R	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				293	1	0.340136	199	17	7.87037
LUZP1	0	genome.wustl.edu	37	1	23419294	23419294	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	23419294	23419294	C	T	SNP	LUZP1	ENST00000302291	human	ensembl	74_37	-1	known	silent	c.1461	p.A487	0.000	NULL	NULL	-	no_errors	LUZP1	HGNC	ENSG00000169641				374	1	0.266667	295	67	18.5083
RYR2	0	genome.wustl.edu	37	1	237777646	237777646	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	237777646	237777646	C	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.5212	p.P1738S	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				76	0	0	49	12	19.6721
ZBTB18	0	genome.wustl.edu	37	1	244218598	244218598	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	244218598	244218598	A	G	SNP	ZBTB18	ENST00000358704	human	ensembl	74_37	+1	known	missense	c.1522	p.K508E	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB18	HGNC	ENSG00000179456				183	0	0	140	42	23.0769
PANK4	0	genome.wustl.edu	37	1	2445527	2445527	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	2445527	2445527	C	T	SNP	PANK4	ENST00000378466	human	ensembl	74_37	-1	known	missense	c.1489	p.A497T	1.000	superfamily_DUF89,pirsf_PanK_long	pfam_Type_II_PanK,pfam_DUF89,superfamily_DUF89,pirsf_PanK_long,tigrfam_Type_II_PanK	-	no_errors	PANK4	HGNC	ENSG00000157881				140	0	0	177	15	7.8125
OR2B11	0	genome.wustl.edu	37	1	247614857	247614857	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	247614857	247614857	G	A	SNP	OR2B11	ENST00000318749	human	ensembl	74_37	-1	known	missense	c.428	p.A143V	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2B11	HGNC	ENSG00000177535				100	0	0	92	13	12.381
OR2W5	0	genome.wustl.edu	37	1	247654874	247654874	+	RNA	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	247654874	247654874	T	C	SNP	OR2W5	ENST00000522351	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.982	-	-	-	no_errors	OR2W5	HGNC	ENSG00000203664				101	0	0	100	27	21.2598
RUNX3	0	genome.wustl.edu	37	1	25245743	25245743	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	25245743	25245743	G	A	SNP	RUNX3	ENST00000338888	human	ensembl	74_37	-1	known	missense	c.574	p.R192W	1.000	pfam_Runt_dom,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_Runt_dom,prints_AML1_Runt	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX3	HGNC	ENSG00000020633				59	0	0	50	11	18.0328
RPS6KA1	0	genome.wustl.edu	37	1	26881655	26881655	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	26881655	26881655	C	T	SNP	RPS6KA1	ENST00000531382	human	ensembl	74_37	+1	known	missense	c.797	p.T266M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RPS6KA1	HGNC	ENSG00000117676				47	0	0	56	8	12.5
SLC9A1	0	genome.wustl.edu	37	1	27426921	27426921	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	27426921	27426921	G	A	SNP	SLC9A1	ENST00000263980	human	ensembl	74_37	-1	known	silent	c.2325	p.D775	0.231	NULL	pfam_Cation/H_exchanger,prints_Na/H_exchanger_1,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A1	HGNC	ENSG00000090020				133	0	0	122	26	17.5676
SLC9A1	0	genome.wustl.edu	37	1	27436222	27436222	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	27436222	27436222	C	T	SNP	SLC9A1	ENST00000263980	human	ensembl	74_37	-1	known	missense	c.860	p.G287D	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_1,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A1	HGNC	ENSG00000090020				144	0	0	121	16	11.6788
ACTRT2	0	genome.wustl.edu	37	1	2938781	2938781	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	2938781	2938781	C	T	SNP	ACTRT2	ENST00000378404	human	ensembl	74_37	+1	known	silent	c.531	p.H177	0.958	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT2	HGNC	ENSG00000169717				82	0	0	61	16	20.7792
PTPRU	0	genome.wustl.edu	37	1	29587410	29587410	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	29587410	29587410	G	A	SNP	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	missense	c.1139	p.C380Y	1.000	superfamily_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656				52	0	0	49	12	19.6721
COL16A1	0	genome.wustl.edu	37	1	32148593	32148593	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	32148593	32148593	C	A	SNP	COL16A1	ENST00000271069	human	ensembl	74_37	-1	known	missense	c.2477	p.G826V	0.992	pfam_Collagen	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL16A1	HGNC	ENSG00000084636				86	0	0	75	23	23.4694
BAI2	0	genome.wustl.edu	37	1	32221745	32221745	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	32221745	32221745	G	A	SNP	BAI2	ENST00000373658	human	ensembl	74_37	-1	known	silent	c.693	p.A231	0.001	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753				30	0	0	31	7	18.4211
SPOCD1	0	genome.wustl.edu	37	1	32280436	32280436	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	32280436	32280436	C	T	SNP	SPOCD1	ENST00000360482	human	ensembl	74_37	-1	known	missense	c.499	p.A167T	0.003	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,superfamily_TFIIS_cen_dom,smart_TFS2M	-	no_errors	SPOCD1	HGNC	ENSG00000134668				154	0	0	134	34	20.2381
KHDRBS1	0	genome.wustl.edu	37	1	32508218	32508218	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	32508218	32508218	G	A	SNP	KHDRBS1	ENST00000327300	human	ensembl	74_37	+1	known	missense	c.1325	p.R442H	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS1	HGNC	ENSG00000121774				64	0	0	59	12	16.9014
TMEM39B	0	genome.wustl.edu	37	1	32566073	32566073	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	32566073	32566073	C	T	SNP	TMEM39B	ENST00000336294	human	ensembl	74_37	+1	known	silent	c.1146	p.G382	0.750	pfam_Uncharacterised_TMEM39	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39B	HGNC	ENSG00000121775				66	0	0	49	12	19.6721
TMEM39B	0	genome.wustl.edu	37	1	32568262	32568262	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	32568262	32568262	C	T	SNP	TMEM39B	ENST00000336294	human	ensembl	74_37	+1	known	silent	c.1467	p.H489	0.996	NULL	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39B	HGNC	ENSG00000121775				57	0	0	73	20	21.5054
KIAA1522	0	genome.wustl.edu	37	1	33237700	33237700	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	33237700	33237700	T	G	SNP	KIAA1522	ENST00000401073	human	ensembl	74_37	+1	known	missense	c.2920	p.F974V	1.000	NULL	NULL	-	no_errors	KIAA1522	HGNC	ENSG00000162522				28	0	0	25	6	19.3548
YARS	0	genome.wustl.edu	37	1	33276252	33276252	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	33276252	33276252	C	A	SNP	YARS	ENST00000373477	human	ensembl	74_37	-1	known	missense	c.320	p.S107I	1.000	pfam_aa-tRNA-synth_Ic,tigrfam_Tyr-tRNA-ligase	pfam_aa-tRNA-synth_Ic,pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold,prints_Tyr-tRNA-ligase,pfscan_tRNA-bd_dom,tigrfam_Tyr-tRNA-ligase	-	no_errors	YARS	HGNC	ENSG00000134684				198	0	0	150	29	16.2011
CSMD2	0	genome.wustl.edu	37	1	34042964	34042964	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	34042964	34042964	C	A	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.7508	p.S2503I	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904				112	1	0.884956	96	26	21.3115
CSMD2	0	genome.wustl.edu	37	1	34209180	34209180	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	34209180	34209180	G	A	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.1874	p.P625L	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904				66	0	0	62	18	22.5
DLGAP3	0	genome.wustl.edu	37	1	35370066	35370066	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	35370066	35370066	C	T	SNP	DLGAP3	ENST00000235180	human	ensembl	74_37	-1	known	missense	c.919	p.G307R	1.000	NULL	pfam_GKAP	-	no_errors	DLGAP3	HGNC	ENSG00000116544				86	0	0	77	12	13.4831
ADPRHL2	0	genome.wustl.edu	37	1	36557382	36557382	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	36557382	36557382	G	A	SNP	ADPRHL2	ENST00000373178	human	ensembl	74_37	+1	known	missense	c.472	p.A158T	1.000	pfam_Ribosyl_crysJ1,superfamily_Ribosyl_crysJ1	pfam_Ribosyl_crysJ1,superfamily_Ribosyl_crysJ1	-	no_errors	ADPRHL2	HGNC	ENSG00000116863				47	0	0	47	13	21.6667
SH3D21	0	genome.wustl.edu	37	1	36785329	36785329	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	36785329	36785329	G	A	SNP	SH3D21	ENST00000453908	human	ensembl	74_37	+1	known	missense	c.1065	p.M355I	0.000	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox,prints_Spectrin_alpha_SH3	-	no_errors	SH3D21	HGNC	ENSG00000214193				33	0	0	20	10	33.3333
ZC3H12A	0	genome.wustl.edu	37	1	37948726	37948726	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	37948726	37948726	G	A	SNP	ZC3H12A	ENST00000373087	human	ensembl	74_37	+1	known	silent	c.1314	p.S438	0.001	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12A	HGNC	ENSG00000163874				36	0	0	35	7	16.6667
INPP5B	0	genome.wustl.edu	37	1	38338648	38338648	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	38338648	38338648	A	G	SNP	INPP5B	ENST00000373023	human	ensembl	74_37	-1	known	missense	c.2381	p.M794T	1.000	NULL	pfam_Endo/exonuclease/phosphatase,pfam_RhoGAP_dom,superfamily_Endo/exonuclease/phosphatase,superfamily_Rho_GTPase_activation_prot,smart_IPPc,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	INPP5B	HGNC	ENSG00000204084				103	0	0	92	21	18.5841
KCNQ4	0	genome.wustl.edu	37	1	41250056	41250056	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	41250056	41250056	G	T	SNP	KCNQ4	ENST00000347132	human	ensembl	74_37	+1	known	missense	c.291	p.W97C	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ4	HGNC	ENSG00000117013				18	0	0	27	8	22.8571
FOXJ3	0	genome.wustl.edu	37	1	42657107	42657107	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	42657107	42657107	T	C	SNP	FOXJ3	ENST00000361346	human	ensembl	74_37	-1	known	silent	c.1218	p.Q406	0.999	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXJ3	HGNC	ENSG00000198815				127	0	0	111	7	5.9322
WDR65	0	genome.wustl.edu	37	1	43664312	43664312	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	43664312	43664312	G	A	SNP	WDR65	ENST00000528956	human	ensembl	74_37	+1	known	missense	c.1423	p.G475R	0.996	superfamily_Quinonprotein_ADH-like_supfam	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR65	HGNC	ENSG00000243710				91	0	0	76	17	18.2796
SZT2	0	genome.wustl.edu	37	1	43888980	43888980	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	43888980	43888980	C	T	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	missense	c.2248	p.L750F	1.000	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198				49	0	0	36	7	16.2791
EIF2B3	0	genome.wustl.edu	37	1	45407190	45407190	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	45407190	45407190	T	C	SNP	EIF2B3	ENST00000360403	human	ensembl	74_37	-1	known	missense	c.442	p.K148E	1.000	NULL	pfam_NTP_transferase	-	no_errors	EIF2B3	HGNC	ENSG00000070785				279	0	0	201	43	17.623
UROD	0	genome.wustl.edu	37	1	45480642	45480642	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	45480642	45480642	G	T	SNP	UROD	ENST00000246337	human	ensembl	74_37	+1	known	missense	c.906	p.Q302H	1.000	pfam_Uroporphyrinogen_deCOase,tigrfam_Uroporphyrinogen_deCO2ase_HemE	pfam_Uroporphyrinogen_deCOase,tigrfam_Uroporphyrinogen_deCO2ase_HemE	-	no_errors	UROD	HGNC	ENSG00000126088				200	0	0	142	29	16.9591
MMACHC	0	genome.wustl.edu	37	1	45973071	45973071	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	45973071	45973071	C	T	SNP	MMACHC	ENST00000401061	human	ensembl	74_37	+1	known	missense	c.125	p.P42L	0.993	NULL	NULL	-	no_errors	MMACHC	HGNC	ENSG00000132763				84	0	0	65	7	9.72222
MAST2	0	genome.wustl.edu	37	1	46496962	46496962	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	46496962	46496962	G	T	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	missense	c.2992	p.A998S	0.976	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015				38	0	0	35	16	31.3725
SPATA6	0	genome.wustl.edu	37	1	48771536	48771536	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	48771536	48771536	T	C	SNP	SPATA6	ENST00000371847	human	ensembl	74_37	-1	known	silent	c.1209	p.L403	0.625	NULL	NULL	-	no_errors	SPATA6	HGNC	ENSG00000132122				273	0	0	208	13	5.88235
RPL22	0	genome.wustl.edu	37	1	6246782	6246782	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	6246782	6246782	G	A	SNP	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	missense	c.337	p.R113C	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251				49	0	0	45	12	21.0526
PDE4B	0	genome.wustl.edu	37	1	66834549	66834549	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	66834549	66834549	G	A	SNP	PDE4B	ENST00000329654	human	ensembl	74_37	+1	known	missense	c.1742	p.R581H	1.000	pfam_PDEase_catalytic_dom,prints_PDEase	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4B	HGNC	ENSG00000184588				164	0	0	130	35	21.2121
TNFRSF9	0	genome.wustl.edu	37	1	7993307	7993307	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	7993307	7993307	C	T	SNP	TNFRSF9	ENST00000377507	human	ensembl	74_37	-1	known	silent	c.594	p.A198	0.000	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_9	-	no_errors	TNFRSF9	HGNC	ENSG00000049249				56	0	0	52	9	14.7541
GBP6	0	genome.wustl.edu	37	1	89849285	89849285	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	89849285	89849285	C	T	SNP	GBP6	ENST00000370456	human	ensembl	74_37	+1	known	silent	c.1440	p.A480	0.032	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP6	HGNC	ENSG00000183347				123	0	0	101	26	20.4724
LRRC8D	0	genome.wustl.edu	37	1	90398726	90398726	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	90398726	90398726	T	C	SNP	LRRC8D	ENST00000337338	human	ensembl	74_37	+1	known	silent	c.99	p.V33	0.934	pfam_LRR_protein-8_N	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8D	HGNC	ENSG00000171492				226	0	0	167	48	22.3256
LRRC8D	0	genome.wustl.edu	37	1	90400443	90400443	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	90400443	90400443	A	G	SNP	LRRC8D	ENST00000337338	human	ensembl	74_37	+1	known	missense	c.1816	p.I606V	1.000	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8D	HGNC	ENSG00000171492				197	0	0	186	14	7
EVI5	0	genome.wustl.edu	37	1	92979232	92979232	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	92979232	92979232	G	A	SNP	EVI5	ENST00000543509	human	ensembl	74_37	-1	known	missense	c.2447	p.S816L	0.428	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	EVI5	HGNC	ENSG00000067208				283	0	0	183	39	17.5676
RPL5	0	genome.wustl.edu	37	1	93303108	93303108	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	93303108	93303108	T	C	SNP	RPL5	ENST00000370321	human	ensembl	74_37	+1	known	missense	c.623	p.M208T	1.000	prints_Rbsml_L5_euk/L18_arc	pfam_Ribosomal_L18/L5,prints_Rbsml_L5_euk/L18_arc	-	no_errors	RPL5	HGNC	ENSG00000122406				110	0	0	72	5	6.49351
CNN3	0	genome.wustl.edu	37	1	95368702	95368702	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	95368702	95368702	G	A	SNP	CNN3	ENST00000370206	human	ensembl	74_37	-1	known	silent	c.222	p.N74	0.520	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,prints_Calponin	pfam_Calponin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,pfscan_Calponin_repeat,prints_SM22_calponin,prints_Calponin	-	no_errors	CNN3	HGNC	ENSG00000117519				100	0	0	58	19	24.6753
COX15	0	genome.wustl.edu	37	10	101486739	101486739	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	101486739	101486739	G	T	SNP	COX15	ENST00000016171	human	ensembl	74_37	-1	known	missense	c.568	p.L190I	0.998	pfam_HemeA_syn	pfam_HemeA_syn,superfamily_Trypsin-like_Pept_dom	-	no_errors	COX15	HGNC	ENSG00000014919				82	0	0	88	10	10.2041
COX15	0	genome.wustl.edu	37	10	101489383	101489383	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	101489383	101489383	G	A	SNP	COX15	ENST00000016171	human	ensembl	74_37	-1	known	missense	c.199	p.R67W	1.000	superfamily_Trypsin-like_Pept_dom	pfam_HemeA_syn,superfamily_Trypsin-like_Pept_dom	-	no_errors	COX15	HGNC	ENSG00000014919				256	0	0	197	50	20.2429
LBX1	0	genome.wustl.edu	37	10	102987152	102987152	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	102987152	102987152	C	T	SNP	LBX1	ENST00000370193	human	ensembl	74_37	-1	known	missense	c.721	p.A241T	0.999	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	LBX1	HGNC	ENSG00000138136				17	0	0	12	4	25
NFKB2	0	genome.wustl.edu	37	10	104160088	104160088	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	104160088	104160088	G	T	SNP	NFKB2	ENST00000369966	human	ensembl	74_37	+1	known	silent	c.1638	p.L546	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_RHD,pfam_Ankyrin_rpt,pfam_Death_domain,superfamily_p53-like_TF_DNA-bd,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ig_E-set,superfamily_DEATH-like_dom,smart_IPT,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_RHD,prints_NF_Rel_Dor,prints_Ankyrin_rpt	-	no_errors	NFKB2	HGNC	ENSG00000077150				110	0	0	105	17	13.9344
CALHM1	0	genome.wustl.edu	37	10	105215212	105215212	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	105215212	105215212	G	A	SNP	CALHM1	ENST00000329905	human	ensembl	74_37	-1	known	missense	c.848	p.A283V	0.003	NULL	NULL	-	no_errors	CALHM1	HGNC	ENSG00000185933				34	0	0	27	5	15.625
COL17A1	0	genome.wustl.edu	37	10	105809853	105809853	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	105809853	105809853	G	T	SNP	COL17A1	ENST00000353479	human	ensembl	74_37	-1	known	missense	c.2158	p.L720I	1.000	NULL	pfam_Collagen	-	no_errors	COL17A1	HGNC	ENSG00000065618				48	0	0	42	12	22.2222
ADD3	0	genome.wustl.edu	37	10	111878421	111878421	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	111878421	111878421	C	A	SNP	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	missense	c.644	p.P215H	1.000	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700				120	0	0	99	50	33.557
SMC3	0	genome.wustl.edu	37	10	112338430	112338430	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	112338430	112338430	G	A	SNP	SMC3	ENST00000361804	human	ensembl	74_37	+1	known	missense	c.395	p.R132Q	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	-	no_errors	SMC3	HGNC	ENSG00000108055				52	0	0	37	10	21.2766
AFAP1L2	0	genome.wustl.edu	37	10	116073684	116073684	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	116073684	116073684	G	A	SNP	AFAP1L2	ENST00000545353	human	ensembl	74_37	-1	known	silent	c.897	p.A299	0.220	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1L2	HGNC	ENSG00000169129				112	0	0	73	12	14.1176
PNLIPRP2	0	genome.wustl.edu	37	10	118404543	118404543	+	Splice_Site	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	118404543	118404543	A	G	SNP	PNLIPRP2	ENST00000537242	human	ensembl	74_37	+1	known	splice_site	c.1344-2	e13-2	1.000	-	-	-	no_errors	PNLIPRP2	HGNC	ENSG00000165862				52	0	0	37	18	32.7273
KIAA1598	0	genome.wustl.edu	37	10	118700118	118700118	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	118700118	118700118	G	T	SNP	KIAA1598	ENST00000392903	human	ensembl	74_37	-1	known	missense	c.717	p.F239L	1.000	NULL	superfamily_Adenylate_cyclase-assoc_CAP_N	-	no_errors	KIAA1598	HGNC	ENSG00000187164				145	0	0	126	20	13.6986
VAX1	0	genome.wustl.edu	37	10	118896101	118896101	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	118896101	118896101	C	T	SNP	VAX1	ENST00000369206	human	ensembl	74_37	-1	known	missense	c.311	p.R104H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	VAX1	HGNC	ENSG00000148704				70	0	0	49	13	20.9677
EIF3A	0	genome.wustl.edu	37	10	120796733	120796733	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	120796733	120796733	G	A	SNP	EIF3A	ENST00000369144	human	ensembl	74_37	-1	known	missense	c.3817	p.R1273C	1.000	NULL	pfam_PCI_dom,smart_PCI_dom	-	no_errors	EIF3A	HGNC	ENSG00000107581				249	0	0	242	16	6.20155
RGS10	0	genome.wustl.edu	37	10	121275031	121275031	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	121275031	121275031	A	G	SNP	RGS10	ENST00000369103	human	ensembl	74_37	-1	known	missense	c.389	p.L130P	0.888	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS10	HGNC	ENSG00000148908				79	0	0	70	21	23.0769
FGFR2	0	genome.wustl.edu	37	10	123279676	123279676	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	123279676	123279676	C	T	SNP	FGFR2	ENST00000457416	human	ensembl	74_37	-1	known	silent	c.756	p.S252	0.000	pirsf_FGF_rcpt_fam	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468				38	0	0	41	3	6.81818
TACC2	0	genome.wustl.edu	37	10	123843197	123843197	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	123843197	123843197	C	T	SNP	TACC2	ENST00000334433	human	ensembl	74_37	+1	known	silent	c.1182	p.G394	0.000	NULL	pfam_TACC	-	no_errors	TACC2	HGNC	ENSG00000138162				76	0	0	84	22	20.7547
C10orf90	0	genome.wustl.edu	37	10	128150089	128150089	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	128150089	128150089	T	C	SNP	C10orf90	ENST00000544758	human	ensembl	74_37	-1	known	missense	c.1891	p.T631A	0.000	NULL	NULL	-	no_errors	C10orf90	HGNC	ENSG00000154493				78	0	0	39	8	17.0213
MKI67	0	genome.wustl.edu	37	10	129903773	129903773	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	129903773	129903773	T	C	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	missense	c.6331	p.M2111V	0.000	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773				767	0	0	711	48	6.32411
MKI67	0	genome.wustl.edu	37	10	129904519	129904519	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	129904519	129904519	G	A	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	missense	c.5585	p.P1862L	0.000	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773				548	0	0	485	118	19.5688
CYP2E1	0	genome.wustl.edu	37	10	135347279	135347279	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	135347279	135347279	G	A	SNP	CYP2E1	ENST00000252945	human	ensembl	74_37	+1	known	missense	c.845	p.R282H	0.004	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I_CYP2E-like	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2E-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2E1	HGNC	ENSG00000130649				122	0	0	110	25	18.5185
FRG2B	0	genome.wustl.edu	37	10	135438851	135438851	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	135438851	135438851	G	T	SNP	FRG2B	ENST00000425520	human	ensembl	74_37	-1	known	missense	c.589	p.Q197K	0.559	NULL	NULL	-	no_errors	FRG2B	HGNC	ENSG00000225899				150	0	0	141	25	15.0602
CDNF	0	genome.wustl.edu	37	10	14867588	14867588	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	14867588	14867588	G	A	SNP	CDNF	ENST00000465530	human	ensembl	74_37	-1	known	missense	c.275	p.A92V	1.000	pfam_Armet_prot	pfam_Armet_prot	-	no_errors	CDNF	HGNC	ENSG00000185267				277	1	0.359712	213	34	13.7652
FAM171A1	0	genome.wustl.edu	37	10	15256478	15256478	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	15256478	15256478	G	A	SNP	FAM171A1	ENST00000378116	human	ensembl	74_37	-1	known	missense	c.1109	p.A370V	0.856	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171A1	HGNC	ENSG00000148468				79	0	0	49	18	26.8657
MYO3A	0	genome.wustl.edu	37	10	26454836	26454836	+	RNA	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	26454836	26454836	G	T	SNP	MYO3A	ENST00000477691	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MYO3A	HGNC	ENSG00000095777				49	0	0	34	7	17.0732
ANKRD30A	0	genome.wustl.edu	37	10	37508154	37508154	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	37508154	37508154	A	G	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	missense	c.3346	p.I1116V	0.070	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513				275	0	0	202	70	25.7353
ENSG00000272373	0	genome.wustl.edu	37	10	43127359	43127359	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	43127359	43127359	C	T	SNP	ENSG00000272373	ENST00000476796	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	ZNF33B	Clone_based_vega_gene	ENSG00000272373				564	0	0	399	91	18.5714
BMS1	0	genome.wustl.edu	37	10	43287077	43287077	+	Silent	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	43287077	43287077	T	G	SNP	BMS1	ENST00000374518	human	ensembl	74_37	+1	known	silent	c.639	p.G213	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_BMS1_TSR1_C,pfam_AARP2CN,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AARP2CN	-	no_errors	BMS1	HGNC	ENSG00000165733				198	1	0.502513	179	17	8.67347
BMS1	0	genome.wustl.edu	37	10	43326431	43326431	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	43326431	43326431	G	A	SNP	BMS1	ENST00000374518	human	ensembl	74_37	+1	known	missense	c.3736	p.E1246K	1.000	NULL	pfam_BMS1_TSR1_C,pfam_AARP2CN,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AARP2CN	-	no_errors	BMS1	HGNC	ENSG00000165733				27	0	0	23	8	25.8065
HNRNPF	0	genome.wustl.edu	37	10	43882124	43882124	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	43882124	43882124	G	A	SNP	HNRNPF	ENST00000337970	human	ensembl	74_37	-1	known	silent	c.1209	p.A403	0.113	NULL	pfam_RRM_dom,pfam_Znf_CHHC,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPF	HGNC	ENSG00000169813				184	0	0	142	45	24.0642
MARCH8	0	genome.wustl.edu	37	10	45956953	45956953	+	RNA	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	45956953	45956953	A	T	SNP	MARCH8	ENST00000476962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	MARCH8	HGNC	ENSG00000165406				26	0	0	18	4	18.1818
ANXA8L2	0	genome.wustl.edu	37	10	47751190	47751190	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	47751190	47751190	C	A	SNP	ANXA8L2	ENST00000374277	human	ensembl	74_37	+1	known	missense	c.67	p.P23T	1.000	prints_AnnexinIII	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinVIII,prints_AnnexinIII	-	no_errors	ANXA8L2	HGNC	ENSG00000186807				10	0	0	9	5	35.7143
GDF2	0	genome.wustl.edu	37	10	48414360	48414360	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	48414360	48414360	C	T	SNP	GDF2	ENST00000249598	human	ensembl	74_37	-1	known	missense	c.508	p.V170M	0.576	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	GDF2	HGNC	ENSG00000128802				91	0	0	83	24	22.4299
ERCC6	0	genome.wustl.edu	37	10	50667115	50667115	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	50667115	50667115	C	T	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	missense	c.4228	p.G1410R	0.049	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830				203	0	0	160	52	24.5283
ERCC6	0	genome.wustl.edu	37	10	50682250	50682250	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	50682250	50682250	G	A	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	silent	c.2421	p.N807	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830				213	0	0	168	37	18.0488
ERCC6	0	genome.wustl.edu	37	10	50686478	50686478	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	50686478	50686478	A	G	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	silent	c.2208	p.D736	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830				443	1	0.225225	349	68	16.307
CHAT	0	genome.wustl.edu	37	10	50863468	50863468	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	50863468	50863468	C	T	SNP	CHAT	ENST00000337653	human	ensembl	74_37	+1	known	missense	c.1813	p.R605C	0.025	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CHAT	HGNC	ENSG00000070748				202	0	0	187	40	17.6211
DKK1	0	genome.wustl.edu	37	10	54074806	54074806	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	54074806	54074806	C	T	SNP	DKK1	ENST00000373970	human	ensembl	74_37	+1	known	missense	c.367	p.R123C	1.000	pfam_Dickkopf_N	pfam_Dickkopf_N	-	no_errors	DKK1	HGNC	ENSG00000107984				64	0	0	37	16	30.1887
ANKRD16	0	genome.wustl.edu	37	10	5931081	5931081	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	5931081	5931081	G	T	SNP	ANKRD16	ENST00000380092	human	ensembl	74_37	-1	known	silent	c.237	p.A79	0.997	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD16	HGNC	ENSG00000134461				24	0	0	28	3	9.67742
ANK3	0	genome.wustl.edu	37	10	61941099	61941099	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	61941099	61941099	G	A	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	silent	c.2172	p.D724	0.984	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				292	1	0.341297	253	19	6.98529
HKDC1	0	genome.wustl.edu	37	10	71020998	71020998	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	71020998	71020998	C	T	SNP	HKDC1	ENST00000354624	human	ensembl	74_37	+1	known	missense	c.2320	p.R774C	0.941	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HKDC1	HGNC	ENSG00000156510				88	0	0	77	17	18.0851
PSAP	0	genome.wustl.edu	37	10	73577214	73577214	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	73577214	73577214	C	T	SNP	PSAP	ENST00000394934	human	ensembl	74_37	-1	known	missense	c.1565	p.R522H	0.994	pirsf_Saposin_chordata,pfam_SapA,smart_SapA,pfscan_SapA	pirsf_Saposin_chordata,pfam_SapB_1,pfam_SapB_2,pfam_SapA,superfamily_Saposin-like,smart_SapA,smart_SaposinB,prints_Saposin,pfscan_SapA,pfscan_SaposinB	-	no_errors	PSAP	HGNC	ENSG00000197746				230	0	0	206	29	12.3404
MICU1	0	genome.wustl.edu	37	10	74135630	74135630	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	74135630	74135630	A	G	SNP	MICU1	ENST00000398761	human	ensembl	74_37	-1	known	missense	c.1187	p.V396A	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MICU1	HGNC	ENSG00000107745				22	0	0	21	3	12.5
USP54	0	genome.wustl.edu	37	10	75296060	75296060	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	75296060	75296060	A	G	SNP	USP54	ENST00000339859	human	ensembl	74_37	-1	known	missense	c.1111	p.Y371H	0.966	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348				108	0	0	85	18	17.4757
USP54	0	genome.wustl.edu	37	10	75301542	75301542	+	RNA	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	75301542	75301542	A	G	SNP	USP54	ENST00000492357	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.006	-	-	-	no_errors	USP54	HGNC	ENSG00000166348				36	0	0	27	6	18.1818
ADK	0	genome.wustl.edu	37	10	76074474	76074474	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	76074474	76074474	T	G	SNP	ADK	ENST00000286621	human	ensembl	74_37	+1	known	missense	c.244	p.S82A	1.000	pfam_PfkB_dom	pfam_PfkB_dom,prints_Adenokinase	-	no_errors	ADK	HGNC	ENSG00000156110				93	0	0	61	22	26.506
ITIH5	0	genome.wustl.edu	37	10	7618870	7618870	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	7618870	7618870	G	A	SNP	ITIH5	ENST00000256861	human	ensembl	74_37	-1	known	silent	c.1524	p.N508	0.996	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH5	HGNC	ENSG00000123243				98	0	0	93	22	19.1304
KAT6B	0	genome.wustl.edu	37	10	76784854	76784854	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	76784854	76784854	C	T	SNP	KAT6B	ENST00000287239	human	ensembl	74_37	+1	known	nonsense	c.3511	p.Q1171*	1.000	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,pfam_Histone_H1/H5_H15,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6B	HGNC	ENSG00000156650				76	0	0	78	8	9.30233
SAMD8	0	genome.wustl.edu	37	10	76910646	76910646	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	76910646	76910646	C	T	SNP	SAMD8	ENST00000372690	human	ensembl	74_37	+1	known	silent	c.549	p.D183	0.998	NULL	pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD8	HGNC	ENSG00000156671				156	0	0	142	17	10.6918
ACTA2	0	genome.wustl.edu	37	10	90699305	90699305	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	90699305	90699305	C	T	SNP	ACTA2	ENST00000224784	human	ensembl	74_37	-1	known	missense	c.767	p.R256H	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTA2	HGNC	ENSG00000107796				171	0	0	147	34	18.7845
IFIT2	0	genome.wustl.edu	37	10	91066258	91066258	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	91066258	91066258	G	T	SNP	IFIT2	ENST00000371826	human	ensembl	74_37	+1	known	missense	c.545	p.S182I	0.009	smart_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFIT2	HGNC	ENSG00000119922				65	0	0	63	8	11.2676
KIF20B	0	genome.wustl.edu	37	10	91478615	91478615	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	91478615	91478615	G	A	SNP	KIF20B	ENST00000416354	human	ensembl	74_37	+1	known	missense	c.1420	p.A474T	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF20B	HGNC	ENSG00000138182				135	0	0	94	25	21.0084
ANKRD1	0	genome.wustl.edu	37	10	92672639	92672639	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	92672639	92672639	C	T	SNP	ANKRD1	ENST00000371697	human	ensembl	74_37	-1	known	missense	c.944	p.R315H	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD1	HGNC	ENSG00000148677				390	0	0	285	59	17.1512
TUBB8	0	genome.wustl.edu	37	10	93721	93721	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	93721	93721	T	A	SNP	TUBB8	ENST00000309812	human	ensembl	74_37	-1	known	missense	c.611	p.N204I	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB8	HGNC	ENSG00000173876				262	0	0	219	12	5.19481
HHEX	0	genome.wustl.edu	37	10	94452213	94452213	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	94452213	94452213	C	T	SNP	HHEX	ENST00000282728	human	ensembl	74_37	+1	known	silent	c.450	p.I150	0.996	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	HHEX	HGNC	ENSG00000152804				74	0	0	58	9	13.4328
LGI1	0	genome.wustl.edu	37	10	95518094	95518094	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	95518094	95518094	G	A	SNP	LGI1	ENST00000371418	human	ensembl	74_37	+1	known	missense	c.193	p.V65I	1.000	NULL	pfam_EPTP,pfam_Leu-rich_rpt,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI1	HGNC	ENSG00000108231				192	0	0	162	47	22.488
ENTPD1-AS1	0	genome.wustl.edu	37	10	97779109	97779109	+	RNA	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	97779109	97779109	A	G	SNP	ENTPD1-AS1	ENST00000458228	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ENTPD1-AS1	HGNC	ENSG00000226688				162	0	0	122	36	22.7848
FRAT1	0	genome.wustl.edu	37	10	99079988	99079988	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	99079988	99079988	C	T	SNP	FRAT1	ENST00000371021	human	ensembl	74_37	+1	known	missense	c.778	p.P260S	0.519	NULL	pfam_GSK3-bd	-	no_errors	FRAT1	HGNC	ENSG00000165879				14	0	0	10	5	33.3333
DYNC2H1	0	genome.wustl.edu	37	11	102992131	102992131	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	102992131	102992131	G	A	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.1391	p.R464Q	1.000	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240				74	0	0	48	6	11.1111
DYNC2H1	0	genome.wustl.edu	37	11	103041640	103041640	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	103041640	103041640	G	A	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.5177	p.R1726Q	0.997	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240				44	0	0	33	5	13.1579
MUC2	0	genome.wustl.edu	37	11	1075884	1075884	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	1075884	1075884	T	C	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.310	p.Y104H	0.996	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				9	0	0	7	5	41.6667
NPAT	0	genome.wustl.edu	37	11	108040522	108040522	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	108040522	108040522	C	T	SNP	NPAT	ENST00000278612	human	ensembl	74_37	-1	known	missense	c.2959	p.V987I	0.021	NULL	smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	NPAT	HGNC	ENSG00000149308				318	0	0	211	63	22.9927
ATM	0	genome.wustl.edu	37	11	108160489	108160489	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	108160489	108160489	G	A	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	missense	c.4397	p.R1466Q	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311				127	0	0	73	20	21.5054
MUC2	0	genome.wustl.edu	37	11	1082685	1082685	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	1082685	1082685	T	C	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.1934	p.M645T	0.029	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				14	0	0	15	7	31.8182
KDELC2	0	genome.wustl.edu	37	11	108351905	108351905	+	Splice_Site	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	108351905	108351905	A	G	SNP	KDELC2	ENST00000323468	human	ensembl	74_37	-1	known	splice_site	c.1098+2	e5+2	1.000	-	-	-	no_errors	KDELC2	HGNC	ENSG00000178202				328	0	0	196	66	25.1908
TTC12	0	genome.wustl.edu	37	11	113196305	113196305	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	113196305	113196305	C	T	SNP	TTC12	ENST00000314756	human	ensembl	74_37	+1	known	missense	c.382	p.R128C	0.000	superfamily_ARM-type_fold,smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,superfamily_ARM-type_fold,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC12	HGNC	ENSG00000149292				115	0	0	88	23	20.7207
FXYD6-FXYD2	0	genome.wustl.edu	37	11	117710514	117710514	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	117710514	117710514	A	G	SNP	FXYD6-FXYD2	ENST00000532984	human	ensembl	74_37	-1	known	missense	c.254	p.V85A	0.291	NULL	pfam_Ion-transport_regulator_FXYD	-	no_errors	FXYD6-FXYD2	HGNC	ENSG00000255245				190	1	0.52356	176	29	14.1463
KMT2A	0	genome.wustl.edu	37	11	118375926	118375926	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	118375926	118375926	T	C	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	silent	c.9310	p.L3104	0.993	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058				419	1	0.238095	338	72	17.561
KMT2A	0	genome.wustl.edu	37	11	118379858	118379858	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	118379858	118379858	G	A	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	missense	c.10834	p.A3612T	0.785	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058				70	0	0	53	6	10.1695
IFT46	0	genome.wustl.edu	37	11	118427698	118427698	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	118427698	118427698	A	G	SNP	IFT46	ENST00000264020	human	ensembl	74_37	-1	known	silent	c.261	p.D87	0.561	NULL	pfam_Intraflagellar_transp_cmplxB	-	no_errors	IFT46	HGNC	ENSG00000118096				170	1	0.584795	138	45	24.5902
PDZD3	0	genome.wustl.edu	37	11	119057184	119057184	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	119057184	119057184	C	T	SNP	PDZD3	ENST00000392817	human	ensembl	74_37	+1	known	missense	c.313	p.P105S	0.249	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD3	HGNC	ENSG00000172367				98	0	0	86	25	22.5225
ARHGEF12	0	genome.wustl.edu	37	11	120298860	120298860	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	120298860	120298860	G	A	SNP	ARHGEF12	ENST00000356641	human	ensembl	74_37	+1	known	silent	c.432	p.P144	0.095	NULL	pfam_RGS-like_dom,pfam_DH-domain,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_DH-domain,superfamily_PDZ,smart_PDZ,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF12	HGNC	ENSG00000196914				358	1	0.278552	279	75	21.1864
TECTA	0	genome.wustl.edu	37	11	121037453	121037453	+	Silent	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	121037453	121037453	C	A	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	silent	c.5550	p.I1850	1.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927				99	0	0	76	22	22.449
SORL1	0	genome.wustl.edu	37	11	121460806	121460806	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	121460806	121460806	G	A	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.4136	p.G1379D	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642				326	1	0.30581	257	55	17.6282
UBASH3B	0	genome.wustl.edu	37	11	122659877	122659877	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	122659877	122659877	A	G	SNP	UBASH3B	ENST00000284273	human	ensembl	74_37	+1	known	missense	c.841	p.I281V	1.000	pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_His_Pase_superF_clade-1,pfam_SH3_domain,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_SH3_domain,superfamily_RNA_ligase/cNuc_Pdiesterase,smart_UBA/transl_elong_EF1B_N_euk,smart_SH3_domain,pfscan_SH3_domain,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBASH3B	HGNC	ENSG00000154127				413	0	0	348	76	17.9245
CLMP	0	genome.wustl.edu	37	11	122944466	122944466	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	122944466	122944466	G	C	SNP	CLMP	ENST00000448775	human	ensembl	74_37	-1	known	missense	c.838	p.P280A	0.999	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_CD47_Vset,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	CLMP	HGNC	ENSG00000166250				166	0	0	134	32	19.2771
ZNF202	0	genome.wustl.edu	37	11	123597620	123597620	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	123597620	123597620	T	C	SNP	ZNF202	ENST00000336139	human	ensembl	74_37	-1	known	silent	c.1032	p.G344	0.419	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF202	HGNC	ENSG00000166261				539	0	0	539	35	6.09756
OR8G5	0	genome.wustl.edu	37	11	124135342	124135342	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	124135342	124135342	A	G	SNP	OR8G5	ENST00000524943	human	ensembl	74_37	+1	known	missense	c.620	p.D207G	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8G5	HGNC	ENSG00000255298				410	0	0	341	60	14.9626
ESAM	0	genome.wustl.edu	37	11	124626554	124626554	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	124626554	124626554	G	A	SNP	ESAM	ENST00000278927	human	ensembl	74_37	-1	known	missense	c.334	p.R112W	0.008	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	ESAM	HGNC	ENSG00000149564				136	0	0	126	13	9.35252
ROBO3	0	genome.wustl.edu	37	11	124749423	124749423	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	124749423	124749423	C	T	SNP	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	missense	c.3748	p.R1250W	0.970	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134				37	0	0	38	4	9.52381
STT3A	0	genome.wustl.edu	37	11	125472242	125472242	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	125472242	125472242	T	C	SNP	STT3A	ENST00000392708	human	ensembl	74_37	+1	known	missense	c.194	p.F65S	1.000	pfam_Oligo_trans_STT3	pfam_Oligo_trans_STT3	-	no_errors	STT3A	HGNC	ENSG00000134910				97	0	0	56	10	15.1515
GLB1L2	0	genome.wustl.edu	37	11	134238664	134238664	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	134238664	134238664	T	C	SNP	GLB1L2	ENST00000339772	human	ensembl	74_37	+1	known	missense	c.1016	p.V339A	0.997	pfam_Glycoside_Hdrlase_35,superfamily_Glycoside_hydrolase_SF,prints_Glycoside_Hdrlase_35	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,prints_Glycoside_Hdrlase_35	-	no_errors	GLB1L2	HGNC	ENSG00000149328				83	0	0	49	19	27.9412
FAR1	0	genome.wustl.edu	37	11	13750163	13750163	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	13750163	13750163	C	T	SNP	FAR1	ENST00000354817	human	ensembl	74_37	+1	known	missense	c.1390	p.R464W	1.000	NULL	pfam_Male_sterile_NAD-bd,pfam_FAR,pfam_Epimerase_deHydtase	-	no_errors	FAR1	HGNC	ENSG00000197601				368	0	0	229	55	19.3662
SOX6	0	genome.wustl.edu	37	11	16340017	16340017	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	16340017	16340017	C	A	SNP	SOX6	ENST00000352083	human	ensembl	74_37	-1	known	missense	c.420	p.E140D	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX6	HGNC	ENSG00000110693				208	0	0	170	37	17.8744
ABCC8	0	genome.wustl.edu	37	11	17414551	17414551	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	17414551	17414551	C	T	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.4736	p.R1579H	0.932	pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071				127	0	0	112	8	6.66667
ABCC8	0	genome.wustl.edu	37	11	17452333	17452333	+	RNA	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	17452333	17452333	A	G	SNP	ABCC8	ENST00000528202	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	ABCC8	HGNC	ENSG00000006071				284	0	0	222	57	20.4301
ABCC8	0	genome.wustl.edu	37	11	17452571	17452571	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	17452571	17452571	C	T	SNP	ABCC8	ENST00000528202	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	ABCC8	HGNC	ENSG00000006071				17	0	0	17	7	29.1667
TSG101	0	genome.wustl.edu	37	11	18531139	18531139	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	18531139	18531139	C	T	SNP	TSG101	ENST00000251968	human	ensembl	74_37	-1	known	missense	c.431	p.R144H	1.000	superfamily_UBQ-conjugating_enzyme/RWD	pfam_UEV_N,pfam_Steadiness_box,superfamily_UBQ-conjugating_enzyme/RWD	-	no_errors	TSG101	HGNC	ENSG00000074319				116	1	0.854701	69	17	19.7674
NAV2	0	genome.wustl.edu	37	11	20078096	20078096	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	20078096	20078096	G	A	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	missense	c.4921	p.V1641M	0.000	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833				104	0	0	79	27	25.4717
LGR4	0	genome.wustl.edu	37	11	27390022	27390022	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	27390022	27390022	C	T	SNP	LGR4	ENST00000379214	human	ensembl	74_37	-1	known	missense	c.2248	p.A750T	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Gphrmn_rcpt_fam	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,pfscan_GPCR_Rhodpsn_7TM,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	-	no_errors	LGR4	HGNC	ENSG00000205213				361	0	0	227	79	25.817
HIPK3	0	genome.wustl.edu	37	11	33308272	33308272	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	33308272	33308272	G	A	SNP	HIPK3	ENST00000303296	human	ensembl	74_37	+1	known	silent	c.312	p.V104	0.559	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK3	HGNC	ENSG00000110422				111	0	0	88	24	21.4286
LDLRAD3	0	genome.wustl.edu	37	11	36057669	36057669	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	36057669	36057669	C	T	SNP	LDLRAD3	ENST00000315571	human	ensembl	74_37	+1	known	silent	c.63	p.P21	0.001	superfamily_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LDLRAD3	HGNC	ENSG00000179241				71	0	0	77	6	7.22892
LINC00610	0	genome.wustl.edu	37	11	36293368	36293368	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	36293368	36293368	C	T	SNP	LINC00610	ENST00000355500	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00610	HGNC	ENSG00000196559				106	0	0	79	16	16.8421
API5	0	genome.wustl.edu	37	11	43364043	43364043	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	43364043	43364043	C	T	SNP	API5	ENST00000531273	human	ensembl	74_37	+1	known	missense	c.1558	p.R520W	1.000	NULL	pfam_API5,superfamily_ARM-type_fold	-	no_errors	API5	HGNC	ENSG00000166181				104	0	0	70	19	21.3483
HSD17B12	0	genome.wustl.edu	37	11	43876365	43876365	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	43876365	43876365	C	A	SNP	HSD17B12	ENST00000278353	human	ensembl	74_37	+1	known	missense	c.785	p.T262K	0.998	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B12	HGNC	ENSG00000149084				176	0	0	110	31	21.9858
ALKBH3	0	genome.wustl.edu	37	11	43918795	43918795	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	43918795	43918795	G	A	SNP	ALKBH3	ENST00000532962	human	ensembl	74_37	+1	known	missense	c.421	p.A141T	0.004	NULL	NULL	-	no_errors	ALKBH3	HGNC	ENSG00000166199				120	0	0	116	9	7.2
ACCS	0	genome.wustl.edu	37	11	44102795	44102795	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	44102795	44102795	G	A	SNP	ACCS	ENST00000263776	human	ensembl	74_37	+1	known	missense	c.1036	p.V346M	0.958	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	ACCS	HGNC	ENSG00000110455				82	0	0	80	27	25.2336
PEX16	0	genome.wustl.edu	37	11	45935754	45935754	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	45935754	45935754	A	G	SNP	PEX16	ENST00000241041	human	ensembl	74_37	-1	known	missense	c.695	p.L232S	1.000	pfam_Pex16	pfam_Pex16	-	no_errors	PEX16	HGNC	ENSG00000121680				35	0	0	15	10	40
NR1H3	0	genome.wustl.edu	37	11	47270196	47270196	+	RNA	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	47270196	47270196	G	T	SNP	NR1H3	ENST00000495866	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NR1H3	HGNC	ENSG00000025434				13	0	0	8	4	33.3333
NR1H3	0	genome.wustl.edu	37	11	47283337	47283337	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	47283337	47283337	G	A	SNP	NR1H3	ENST00000481889	human	ensembl	74_37	+1	putative	silent	c.813	p.G271	0.000	smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Liver_X_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Ecdystd_rcpt,prints_ThyrH_rcpt	-	no_errors	NR1H3	HGNC	ENSG00000025434				105	0	0	108	34	23.9437
FNBP4	0	genome.wustl.edu	37	11	47746252	47746252	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	47746252	47746252	A	C	SNP	FNBP4	ENST00000263773	human	ensembl	74_37	-1	known	missense	c.2087	p.L696R	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	FNBP4	HGNC	ENSG00000109920				71	0	0	60	20	25
FOLH1	0	genome.wustl.edu	37	11	49190753	49190753	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	49190753	49190753	T	C	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	missense	c.1366	p.I456V	0.998	pfam_Peptidase_M28	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205				110	0	0	100	7	6.54206
RNH1	0	genome.wustl.edu	37	11	498463	498463	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	498463	498463	G	A	SNP	RNH1	ENST00000354420	human	ensembl	74_37	-1	known	missense	c.950	p.S317L	0.006	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp	-	no_errors	RNH1	HGNC	ENSG00000023191				63	0	0	66	18	21.4286
OR51B4	0	genome.wustl.edu	37	11	5322905	5322905	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	5322905	5322905	G	A	SNP	OR51B4	ENST00000380224	human	ensembl	74_37	-1	known	missense	c.272	p.A91V	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51B4	HGNC	ENSG00000183251				124	1	0.8	136	14	9.33333
UBQLN3	0	genome.wustl.edu	37	11	5528897	5528897	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	5528897	5528897	C	T	SNP	UBQLN3	ENST00000311659	human	ensembl	74_37	-1	known	missense	c.1892	p.R631H	0.135	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN3	HGNC	ENSG00000175520				98	0	0	77	21	21.4286
UBQLN3	0	genome.wustl.edu	37	11	5529850	5529850	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	5529850	5529850	T	C	SNP	UBQLN3	ENST00000311659	human	ensembl	74_37	-1	known	silent	c.939	p.S313	0.001	NULL	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN3	HGNC	ENSG00000175520				154	0	0	136	33	19.5266
OR10AG1	0	genome.wustl.edu	37	11	55735845	55735845	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	55735845	55735845	C	T	SNP	OR10AG1	ENST00000312345	human	ensembl	74_37	-1	known	missense	c.95	p.C32Y	0.747	pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10AG1	HGNC	ENSG00000174970				166	0	0	139	32	18.7135
OR8H3	0	genome.wustl.edu	37	11	55890069	55890069	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	55890069	55890069	A	C	SNP	OR8H3	ENST00000313472	human	ensembl	74_37	+1	known	missense	c.221	p.Y74S	0.049	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H3	HGNC	ENSG00000181761				771	2	0.258732	618	103	14.2857
OR5J2	0	genome.wustl.edu	37	11	55944465	55944465	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	55944465	55944465	G	T	SNP	OR5J2	ENST00000312298	human	ensembl	74_37	+1	known	silent	c.372	p.V124	0.993	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR5J2	HGNC	ENSG00000174957				203	0	0	155	26	14.3646
OR5J2	0	genome.wustl.edu	37	11	55944474	55944474	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	55944474	55944474	G	T	SNP	OR5J2	ENST00000312298	human	ensembl	74_37	+1	known	silent	c.381	p.V127	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR5J2	HGNC	ENSG00000174957				203	0	0	173	25	12.6263
P2RX3	0	genome.wustl.edu	37	11	57115716	57115716	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	57115716	57115716	C	T	SNP	P2RX3	ENST00000263314	human	ensembl	74_37	+1	known	missense	c.464	p.T155M	0.323	pfam_P2X_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X3_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX3	HGNC	ENSG00000109991				11	0	0	15	3	16.6667
OR10W1	0	genome.wustl.edu	37	11	58035201	58035201	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	58035201	58035201	T	C	SNP	OR10W1	ENST00000395079	human	ensembl	74_37	-1	known	missense	c.130	p.T44A	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10W1	HGNC	ENSG00000172772				102	0	0	87	16	15.534
TMEM138	0	genome.wustl.edu	37	11	61131767	61131767	+	RNA	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	61131767	61131767	C	A	SNP	TMEM138	ENST00000451389	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM138	HGNC	ENSG00000149483				40	0	0	24	6	20
PPP1R32	0	genome.wustl.edu	37	11	61257273	61257273	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	61257273	61257273	A	G	SNP	PPP1R32	ENST00000338608	human	ensembl	74_37	+1	known	missense	c.1063	p.K355E	1.000	NULL	NULL	-	no_errors	PPP1R32	HGNC	ENSG00000162148				76	0	0	88	8	8.33333
DAGLA	0	genome.wustl.edu	37	11	61504660	61504660	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	61504660	61504660	G	A	SNP	DAGLA	ENST00000257215	human	ensembl	74_37	+1	known	missense	c.1378	p.G460R	1.000	pfam_Lipase_3	pfam_Lipase_3	-	no_errors	DAGLA	HGNC	ENSG00000134780				195	0	0	211	12	5.38117
AHNAK	0	genome.wustl.edu	37	11	62287437	62287437	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	62287437	62287437	C	T	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	missense	c.14452	p.V4818I	0.048	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942				321	0	0	264	72	21.4286
ROM1	0	genome.wustl.edu	37	11	62381299	62381299	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	62381299	62381299	G	T	SNP	ROM1	ENST00000278833	human	ensembl	74_37	+1	known	missense	c.546	p.W182C	1.000	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Peripherin/rom-1	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Peripherin/rom-1	-	no_errors	ROM1	HGNC	ENSG00000149489				77	0	0	51	10	16.3934
LRRN4CL	0	genome.wustl.edu	37	11	62455710	62455710	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	62455710	62455710	C	A	SNP	LRRN4CL	ENST00000317449	human	ensembl	74_37	-1	known	missense	c.271	p.V91L	0.219	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LRRN4CL	HGNC	ENSG00000177363				17	0	0	26	8	23.5294
HNRNPUL2	0	genome.wustl.edu	37	11	62483058	62483058	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	62483058	62483058	G	A	SNP	HNRNPUL2	ENST00000301785	human	ensembl	74_37	-1	known	nonsense	c.2077	p.R693*	1.000	NULL	pfam_SPRY_rcpt,pfam_SAP_dom,pfam_Zeta_toxin_domain,pfam_Chromatin_KTI12,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL2	HGNC	ENSG00000214753				158	0	0	144	8	5.26316
CNGA4	0	genome.wustl.edu	37	11	6260711	6260711	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	6260711	6260711	T	G	SNP	CNGA4	ENST00000379936	human	ensembl	74_37	+1	known	missense	c.160	p.C54G	0.834	NULL	pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA4	HGNC	ENSG00000132259				231	0	0	219	12	5.19481
SLC22A6	0	genome.wustl.edu	37	11	62744711	62744711	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	62744711	62744711	G	A	SNP	SLC22A6	ENST00000377871	human	ensembl	74_37	-1	known	silent	c.1510	p.L504	1.000	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A6	HGNC	ENSG00000197901				131	0	0	92	29	23.9669
MARK2	0	genome.wustl.edu	37	11	63666286	63666286	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	63666286	63666286	C	T	SNP	MARK2	ENST00000402010	human	ensembl	74_37	+1	known	missense	c.455	p.A152V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK2	HGNC	ENSG00000072518				84	0	0	62	16	20.5128
MARK2	0	genome.wustl.edu	37	11	63669730	63669730	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	63669730	63669730	G	A	SNP	MARK2	ENST00000402010	human	ensembl	74_37	+1	known	missense	c.1162	p.A388T	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK2	HGNC	ENSG00000072518				104	0	0	64	23	26.4368
MACROD1	0	genome.wustl.edu	37	11	63782731	63782731	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	63782731	63782731	G	A	SNP	MACROD1	ENST00000255681	human	ensembl	74_37	-1	known	silent	c.540	p.G180	0.994	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	-	no_errors	MACROD1	HGNC	ENSG00000133315				16	0	0	15	5	25
DRD4	0	genome.wustl.edu	37	11	640597	640597	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	640597	640597	C	G	SNP	DRD4	ENST00000176183	human	ensembl	74_37	+1	known	missense	c.1254	p.C418W	0.986	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Dopamine_D4_rcpt,prints_Dopamine_rcpt	-	no_errors	DRD4	HGNC	ENSG00000069696				56	0	0	53	21	28.3784
CDC42BPG	0	genome.wustl.edu	37	11	64604405	64604405	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	64604405	64604405	C	A	SNP	CDC42BPG	ENST00000342711	human	ensembl	74_37	-1	known	missense	c.1292	p.R431M	0.915	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219				107	0	0	86	17	16.5049
ATG2A	0	genome.wustl.edu	37	11	64677365	64677365	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	64677365	64677365	G	A	SNP	ATG2A	ENST00000421419	human	ensembl	74_37	-1	known	missense	c.1895	p.T632M	0.671	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2A	HGNC	ENSG00000110046				56	0	0	46	10	17.8571
NAALADL1	0	genome.wustl.edu	37	11	64825848	64825848	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	64825848	64825848	A	G	SNP	NAALADL1	ENST00000358658	human	ensembl	74_37	-1	known	missense	c.146	p.M49T	0.630	NULL	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL1	HGNC	ENSG00000168060				68	0	0	67	14	17.284
MALAT1	0	genome.wustl.edu	37	11	65272957	65272957	+	RNA	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	65272957	65272957	G	C	SNP	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				242	2	0.819672	160	43	21.1823
CD248	0	genome.wustl.edu	37	11	66083272	66083272	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	66083272	66083272	G	T	SNP	CD248	ENST00000311330	human	ensembl	74_37	-1	known	silent	c.1227	p.A409	0.482	NULL	pfam_C-type_lectin,pfam_EGF-like_Ca-bd_dom,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_C-type_lectin	-	no_errors	CD248	HGNC	ENSG00000174807				130	0	0	154	10	6.09756
PELI3	0	genome.wustl.edu	37	11	66238785	66238785	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	66238785	66238785	C	T	SNP	PELI3	ENST00000320740	human	ensembl	74_37	+1	known	silent	c.297	p.H99	0.886	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI3	HGNC	ENSG00000174516				160	0	0	128	32	20
CCS	0	genome.wustl.edu	37	11	66373260	66373260	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	66373260	66373260	G	T	SNP	CCS	ENST00000533244	human	ensembl	74_37	+1	known	missense	c.759	p.E253D	1.000	superfamily_SOD_Cu_Zn_dom	pfam_SOD_Cu_Zn_dom,pfam_HeavyMe-assoc_HMA,superfamily_SOD_Cu_Zn_dom,superfamily_HeavyMe-assoc_HMA,prints_SOD_Cu_Zn_dom,pfscan_HeavyMe-assoc_HMA	-	no_errors	CCS	HGNC	ENSG00000173992				58	0	0	50	9	15.2542
DCHS1	0	genome.wustl.edu	37	11	6646598	6646598	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	6646598	6646598	C	T	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	missense	c.6977	p.R2326H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341				94	0	0	70	25	26.3158
ANKRD13D	0	genome.wustl.edu	37	11	67069033	67069033	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	67069033	67069033	C	T	SNP	ANKRD13D	ENST00000511455	human	ensembl	74_37	+1	known	missense	c.1423	p.R475C	1.000	NULL	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ubiquitin-int_motif,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif	-	no_errors	ANKRD13D	HGNC	ENSG00000172932				80	0	0	58	20	25.641
SSH3	0	genome.wustl.edu	37	11	67075730	67075730	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	67075730	67075730	C	T	SNP	SSH3	ENST00000308127	human	ensembl	74_37	+1	known	missense	c.971	p.A324V	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH3	HGNC	ENSG00000172830				104	0	0	95	24	20.1681
PITPNM1	0	genome.wustl.edu	37	11	67267200	67267200	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	67267200	67267200	T	C	SNP	PITPNM1	ENST00000356404	human	ensembl	74_37	-1	known	missense	c.1165	p.T389A	0.005	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697				71	0	0	49	10	16.9492
ORAOV1	0	genome.wustl.edu	37	11	69488006	69488006	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	69488006	69488006	T	C	SNP	ORAOV1	ENST00000279147	human	ensembl	74_37	-1	known	missense	c.134	p.H45R	0.838	pfam_Essential_protein_Yae1_N	pfam_Essential_protein_Yae1_N	-	no_errors	ORAOV1	HGNC	ENSG00000149716				140	0	0	91	31	25.4098
CTTN	0	genome.wustl.edu	37	11	70279811	70279811	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	70279811	70279811	C	T	SNP	CTTN	ENST00000301843	human	ensembl	74_37	+1	known	silent	c.1503	p.Y501	0.957	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	pfam_Hs1_Cortactin,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_Hs1_Cortactin,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	CTTN	HGNC	ENSG00000085733				125	0	0	93	23	19.8276
CTTN	0	genome.wustl.edu	37	11	70282414	70282414	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	70282414	70282414	G	A	SNP	CTTN	ENST00000376561	human	ensembl	74_37	+1	putative	missense	c.1805	p.R602Q	0.000	NULL	pfam_Hs1_Cortactin,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_Hs1_Cortactin,pfscan_SH3_domain	-	no_errors	CTTN	HGNC	ENSG00000085733				176	0	0	191	31	13.964
SHANK2	0	genome.wustl.edu	37	11	70333142	70333142	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	70333142	70333142	C	T	SNP	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	missense	c.3259	p.V1087I	0.997	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105				73	0	0	60	14	18.9189
SERPINH1	0	genome.wustl.edu	37	11	75282937	75282937	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	75282937	75282937	G	A	SNP	SERPINH1	ENST00000358171	human	ensembl	74_37	+1	known	missense	c.1066	p.A356T	1.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINH1	HGNC	ENSG00000149257				64	0	0	34	6	15
MAP6	0	genome.wustl.edu	37	11	75298694	75298694	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	75298694	75298694	C	A	SNP	MAP6	ENST00000304771	human	ensembl	74_37	-1	known	missense	c.1852	p.G618C	0.013	NULL	pfam_MAP6/FAM154	-	no_errors	MAP6	HGNC	ENSG00000171533				332	0	0	240	68	22.0779
INTS4	0	genome.wustl.edu	37	11	77649864	77649864	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	77649864	77649864	C	T	SNP	INTS4	ENST00000534064	human	ensembl	74_37	-1	known	missense	c.998	p.R333H	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	INTS4	HGNC	ENSG00000149262				218	0	0	168	29	14.7208
TENM4	0	genome.wustl.edu	37	11	78440583	78440583	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	78440583	78440583	G	A	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.3244	p.P1082S	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				62	0	0	51	5	8.92857
SYTL2	0	genome.wustl.edu	37	11	85437589	85437589	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	85437589	85437589	C	T	SNP	SYTL2	ENST00000359152	human	ensembl	74_37	-1	known	missense	c.1483	p.G495R	0.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYTL2	HGNC	ENSG00000137501				75	0	0	53	16	23.1884
ST5	0	genome.wustl.edu	37	11	8739392	8739392	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	8739392	8739392	G	A	SNP	ST5	ENST00000313726	human	ensembl	74_37	-1	known	nonsense	c.1525	p.R509*	0.989	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	ST5	HGNC	ENSG00000166444				112	0	0	84	10	10.6383
RAB38	0	genome.wustl.edu	37	11	87883091	87883091	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	87883091	87883091	A	G	SNP	RAB38	ENST00000243662	human	ensembl	74_37	-1	known	missense	c.235	p.Y79H	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB38	HGNC	ENSG00000123892				495	0	0	337	94	21.8097
CTSC	0	genome.wustl.edu	37	11	88027300	88027300	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	88027300	88027300	G	A	SNP	CTSC	ENST00000227266	human	ensembl	74_37	-1	known	silent	c.1266	p.Y422	1.000	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_CathepsinC_exc,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSC	HGNC	ENSG00000109861				119	0	0	113	10	8.13008
FOLH1B	0	genome.wustl.edu	37	11	89392677	89392677	+	RNA	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	89392677	89392677	T	C	SNP	FOLH1B	ENST00000525540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FOLH1B	HGNC	ENSG00000134612				63	0	0	27	11	28.9474
DENND5A	0	genome.wustl.edu	37	11	9202415	9202415	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	9202415	9202415	T	C	SNP	DENND5A	ENST00000328194	human	ensembl	74_37	-1	known	missense	c.1354	p.I452V	1.000	NULL	pfam_DENN_dom,pfam_Run,pfam_uDENN_dom,pfam_dDENN_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_Run,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_PLAT/LH2_dom,pfscan_Run	-	no_errors	DENND5A	HGNC	ENSG00000184014				255	0	0	221	39	15
FAT3	0	genome.wustl.edu	37	11	92532253	92532253	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	92532253	92532253	A	C	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.6074	p.K2025T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				143	0	0	129	22	14.5695
FAT3	0	genome.wustl.edu	37	11	92577560	92577560	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	92577560	92577560	C	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.11027	p.A3676V	0.995	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				66	0	0	60	13	17.8082
MRE11A	0	genome.wustl.edu	37	11	94180539	94180539	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	94180539	94180539	A	G	SNP	MRE11A	ENST00000323929	human	ensembl	74_37	-1	known	silent	c.1629	p.D543	0.807	pirsf_DNA_repair_Mre11	pfam_Mre11_DNA-bd,pfam_PEstase_dom,pirsf_DNA_repair_Mre11,tigrfam_DNA_repair_Mre11	-	no_errors	MRE11A	HGNC	ENSG00000020922				194	0	0	161	33	17.0103
ARL1	0	genome.wustl.edu	37	12	101790156	101790156	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	101790156	101790156	T	A	SNP	ARL1	ENST00000551671	human	ensembl	74_37	-1	putative	missense	c.536	p.K179M	0.001	superfamily_P-loop_NTPase,smart_Small_GTPase_ARF	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_Gtr1_RagA,pfam_SRP_receptor_beta_su,pfam_Gprotein_alpha_su,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL1	HGNC	ENSG00000120805				253	0	0	222	60	21.2766
CLEC1A	0	genome.wustl.edu	37	12	10225945	10225945	+	Silent	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	10225945	10225945	A	C	SNP	CLEC1A	ENST00000315330	human	ensembl	74_37	-1	known	silent	c.609	p.P203	0.012	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC1A	HGNC	ENSG00000150048				133	0	0	117	9	7.14286
IGF1	0	genome.wustl.edu	37	12	102813396	102813396	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	102813396	102813396	C	T	SNP	IGF1	ENST00000307046	human	ensembl	74_37	-1	known	missense	c.293	p.R98Q	1.000	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Insulin_family,prints_Insulin-like_growth_factor	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_IGF-I,prints_Insulin_family,prints_Insulin-like_growth_factor	-	no_errors	IGF1	HGNC	ENSG00000017427				59	0	0	45	17	27.4194
KIAA1033	0	genome.wustl.edu	37	12	105540906	105540906	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	105540906	105540906	G	A	SNP	KIAA1033	ENST00000332180	human	ensembl	74_37	+1	known	silent	c.2496	p.T832	0.269	NULL	NULL	-	no_errors	KIAA1033	HGNC	ENSG00000136051				131	0	0	101	30	22.9008
RFX4	0	genome.wustl.edu	37	12	107080862	107080862	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	107080862	107080862	T	A	SNP	RFX4	ENST00000357881	human	ensembl	74_37	+1	known	missense	c.605	p.L202Q	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX4	HGNC	ENSG00000111783				138	0	0	125	7	5.30303
ASCL4	0	genome.wustl.edu	37	12	108169016	108169016	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	108169016	108169016	G	A	SNP	ASCL4	ENST00000342331	human	ensembl	74_37	+1	known	silent	c.24	p.A8	0.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ASCL4	HGNC	ENSG00000187855				162	0	0	148	12	7.5
SELPLG	0	genome.wustl.edu	37	12	109017999	109017999	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	109017999	109017999	C	T	SNP	SELPLG	ENST00000550948	human	ensembl	74_37	-1	known	missense	c.85	p.E29K	0.000	NULL	NULL	-	no_errors	SELPLG	HGNC	ENSG00000110876				129	0	0	98	20	16.9492
UBE3B	0	genome.wustl.edu	37	12	109972426	109972426	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	109972426	109972426	C	T	SNP	UBE3B	ENST00000342494	human	ensembl	74_37	+1	known	missense	c.3046	p.R1016W	0.958	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_IQ_motif_EF-hand-BS,superfamily_HECT,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3B	HGNC	ENSG00000151148				53	0	0	42	19	31.1475
TAS2R30	0	genome.wustl.edu	37	12	11286356	11286356	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	11286356	11286356	G	C	SNP	TAS2R30	ENST00000539585	human	ensembl	74_37	-1	known	missense	c.488	p.T163S	0.001	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R30	HGNC	ENSG00000256188				330	0	0	224	51	18.5455
RSRC2	0	genome.wustl.edu	37	12	122992836	122992836	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	122992836	122992836	C	T	SNP	RSRC2	ENST00000331738	human	ensembl	74_37	-1	known	missense	c.964	p.A322T	1.000	NULL	NULL	-	no_errors	RSRC2	HGNC	ENSG00000111011				185	1	0.537634	118	28	19.1781
DUSP16	0	genome.wustl.edu	37	12	12629784	12629784	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	12629784	12629784	T	G	SNP	DUSP16	ENST00000228862	human	ensembl	74_37	-1	known	missense	c.1981	p.I661L	0.321	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP16	HGNC	ENSG00000111266				233	0	0	188	56	22.9508
P2RX2	0	genome.wustl.edu	37	12	133197083	133197083	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	133197083	133197083	G	A	SNP	P2RX2	ENST00000343948	human	ensembl	74_37	+1	known	missense	c.688	p.E230K	0.000	pfam_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X2_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX2	HGNC	ENSG00000187848				88	0	0	82	15	15.4639
POLE	0	genome.wustl.edu	37	12	133256104	133256104	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	133256104	133256104	G	A	SNP	POLE	ENST00000320574	human	ensembl	74_37	-1	known	missense	c.557	p.A186V	0.022	pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084				224	0	0	227	12	5.02092
ANKLE2	0	genome.wustl.edu	37	12	133319798	133319798	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	133319798	133319798	G	A	SNP	ANKLE2	ENST00000357997	human	ensembl	74_37	-1	known	missense	c.1295	p.S432L	1.000	superfamily_Ankyrin_rpt-contain_dom	pfam_LEM_dom,superfamily_LEM/LEM-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ribosomal_L9/RNase_H1_N,pfscan_LEM_dom	-	no_errors	ANKLE2	HGNC	ENSG00000176915				110	0	0	82	19	18.8119
GOLGA3	0	genome.wustl.edu	37	12	133374948	133374948	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	133374948	133374948	G	A	SNP	GOLGA3	ENST00000204726	human	ensembl	74_37	-1	known	missense	c.1916	p.A639V	1.000	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615				167	0	0	144	36	20
PLBD1	0	genome.wustl.edu	37	12	14706188	14706188	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	14706188	14706188	T	G	SNP	PLBD1	ENST00000240617	human	ensembl	74_37	-1	known	missense	c.274	p.T92P	0.000	pfam_PLipase_B-like	pfam_PLipase_B-like	-	no_errors	PLBD1	HGNC	ENSG00000121316				113	0	0	97	6	5.82524
GUCY2C	0	genome.wustl.edu	37	12	14781623	14781623	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	14781623	14781623	G	A	SNP	GUCY2C	ENST00000261170	human	ensembl	74_37	-1	known	missense	c.2206	p.P736S	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_A/G_cyclase,superfamily_Peripla_BP_I,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019				189	0	0	136	38	21.8391
WNT5B	0	genome.wustl.edu	37	12	1748923	1748923	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	1748923	1748923	C	T	SNP	WNT5B	ENST00000310594	human	ensembl	74_37	+1	known	silent	c.402	p.R134	0.966	pfam_Wnt,smart_Wnt,prints_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt	-	no_errors	WNT5B	HGNC	ENSG00000111186				15	0	0	23	7	23.3333
CACNA2D4	0	genome.wustl.edu	37	12	1983828	1983828	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	1983828	1983828	A	G	SNP	CACNA2D4	ENST00000382722	human	ensembl	74_37	-1	known	missense	c.1820	p.M607T	1.000	NULL	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D4	HGNC	ENSG00000151062				80	0	0	69	12	14.8148
C2CD5	0	genome.wustl.edu	37	12	22624384	22624384	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	22624384	22624384	G	T	SNP	C2CD5	ENST00000333957	human	ensembl	74_37	-1	known	nonsense	c.2307	p.C769*	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	C2CD5	HGNC	ENSG00000111731				145	0	0	112	14	11.1111
ITPR2	0	genome.wustl.edu	37	12	26572039	26572039	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	26572039	26572039	C	T	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	silent	c.7053	p.A2351	0.000	pfam_Ion_trans_dom	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104				83	0	0	59	14	19.1781
KLHL42	0	genome.wustl.edu	37	12	27950767	27950767	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	27950767	27950767	G	A	SNP	KLHL42	ENST00000381271	human	ensembl	74_37	+1	known	missense	c.1186	p.V396M	1.000	NULL	pfam_Kelch_1,pfam_BACK,superfamily_BTB/POZ_fold,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL42	HGNC	ENSG00000087448				275	0	0	193	55	22.1774
PTHLH	0	genome.wustl.edu	37	12	28122392	28122392	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	28122392	28122392	C	T	SNP	PTHLH	ENST00000354417	human	ensembl	74_37	-1	known	silent	c.36	p.A12	0.980	pfam_PTH/PTH-rel	pfam_PTH/PTH-rel,smart_PTH/PTH-rel	-	no_errors	PTHLH	HGNC	ENSG00000087494				11	0	0	6	6	50
LRRK2	0	genome.wustl.edu	37	12	40717061	40717061	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	40717061	40717061	T	C	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.5609	p.L1870S	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906				152	0	0	102	23	18.4
NELL2	0	genome.wustl.edu	37	12	45269072	45269072	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	45269072	45269072	C	T	SNP	NELL2	ENST00000437801	human	ensembl	74_37	-1	known	silent	c.270	p.E90	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL2	HGNC	ENSG00000184613				57	0	0	42	11	20.7547
SENP1	0	genome.wustl.edu	37	12	48477525	48477525	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	48477525	48477525	G	A	SNP	SENP1	ENST00000004980	human	ensembl	74_37	-1	known	missense	c.401	p.A134V	0.001	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP1	HGNC	ENSG00000079387				169	0	0	106	22	17.1875
KMT2D	0	genome.wustl.edu	37	12	49445038	49445038	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	49445038	49445038	T	C	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.2428	p.T810A	0.002	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				96	0	0	54	9	14.2857
KCNH3	0	genome.wustl.edu	37	12	49948198	49948198	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	49948198	49948198	C	T	SNP	KCNH3	ENST00000257981	human	ensembl	74_37	+1	known	missense	c.1997	p.T666M	1.000	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_4,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH3	HGNC	ENSG00000135519				124	0	0	120	25	17.2414
KCNA1	0	genome.wustl.edu	37	12	5021148	5021148	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	5021148	5021148	G	A	SNP	KCNA1	ENST00000382545	human	ensembl	74_37	+1	known	missense	c.604	p.V202I	0.001	prints_K_chnl_volt-dep_Kv1.1	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv1.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1.3	-	no_errors	KCNA1	HGNC	ENSG00000111262				78	0	0	66	29	30.5263
BCDIN3D-AS1	0	genome.wustl.edu	37	12	50232905	50232905	+	RNA	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	50232905	50232905	G	T	SNP	BCDIN3D-AS1	ENST00000548872	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	BCDIN3D-AS1	HGNC	ENSG00000258057				23	0	0	21	4	16
AQP6	0	genome.wustl.edu	37	12	50369275	50369275	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	50369275	50369275	G	A	SNP	AQP6	ENST00000315520	human	ensembl	74_37	+1	known	missense	c.670	p.A224T	0.973	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,prints_Aquaporin_6,tigrfam_MIP	-	no_errors	AQP6	HGNC	ENSG00000086159				242	0	0	260	65	20
DIP2B	0	genome.wustl.edu	37	12	51054033	51054033	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	51054033	51054033	G	A	SNP	DIP2B	ENST00000301180	human	ensembl	74_37	+1	known	missense	c.358	p.A120T	1.000	pfam_DMAP1-bd	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2B	HGNC	ENSG00000066084				235	0	0	170	52	23.4234
KRT73	0	genome.wustl.edu	37	12	53009982	53009982	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	53009982	53009982	G	A	SNP	KRT73	ENST00000305748	human	ensembl	74_37	-1	known	silent	c.630	p.S210	0.239	pfam_IF,prints_Keratin_II	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT73	HGNC	ENSG00000186049				185	0	0	178	15	7.77202
KRT3	0	genome.wustl.edu	37	12	53189265	53189265	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	53189265	53189265	C	T	SNP	KRT3	ENST00000309505	human	ensembl	74_37	-1	known	missense	c.562	p.D188N	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT3	HGNC	ENSG00000186442				113	0	0	73	14	16.092
TENC1	0	genome.wustl.edu	37	12	53448186	53448186	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	53448186	53448186	G	A	SNP	TENC1	ENST00000314276	human	ensembl	74_37	+1	known	silent	c.513	p.L171	1.000	pfscan_Phosphatase_tensin-typ	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TENC1	HGNC	ENSG00000111077				37	0	0	36	8	18.1818
IGFBP6	0	genome.wustl.edu	37	12	53496097	53496097	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	53496097	53496097	G	A	SNP	IGFBP6	ENST00000549628	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	IGFBP6	HGNC	ENSG00000167779				8	0	0	3	4	57.1429
ITGB7	0	genome.wustl.edu	37	12	53586138	53586138	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	53586138	53586138	C	T	SNP	ITGB7	ENST00000267082	human	ensembl	74_37	-1	known	missense	c.2131	p.V711M	0.000	pirsf_Integrin_bsu,superfamily_Integrin_bsu_tail	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_EGF_extracell,superfamily_Plexin-like_fold,superfamily_Integrin_bsu_tail,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB7	HGNC	ENSG00000139626				131	0	0	110	21	16.0305
ESPL1	0	genome.wustl.edu	37	12	53679949	53679949	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	53679949	53679949	A	G	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	silent	c.3429	p.S1143	0.000	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476				204	2	0.970874	161	32	16.5803
AMHR2	0	genome.wustl.edu	37	12	53818998	53818998	+	Silent	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	53818998	53818998	C	G	SNP	AMHR2	ENST00000257863	human	ensembl	74_37	+1	known	silent	c.474	p.L158	0.063	pirsf_Anti-muellerian_hrmn_rcpt_II	pirsf_Anti-muellerian_hrmn_rcpt_II,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AMHR2	HGNC	ENSG00000135409				170	0	0	130	26	16.6667
HOXC13	0	genome.wustl.edu	37	12	54338951	54338951	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	54338951	54338951	C	T	SNP	HOXC13	ENST00000243056	human	ensembl	74_37	+1	known	missense	c.904	p.R302C	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_HoxA13_N,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOXC13	HGNC	ENSG00000123364				81	0	0	81	17	17.3469
HOXC10	0	genome.wustl.edu	37	12	54379398	54379398	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	54379398	54379398	C	T	SNP	HOXC10	ENST00000303460	human	ensembl	74_37	+1	known	missense	c.355	p.R119W	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXC10	HGNC	ENSG00000180818				56	0	0	75	14	15.7303
HOXC5	0	genome.wustl.edu	37	12	54427288	54427288	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	54427288	54427288	C	T	SNP	HOXC5	ENST00000312492	human	ensembl	74_37	+1	known	missense	c.382	p.P128S	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXC5	HGNC	ENSG00000172789				19	0	0	3	5	62.5
HOXC5	0	genome.wustl.edu	37	12	54428259	54428259	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	54428259	54428259	A	G	SNP	HOXC5	ENST00000312492	human	ensembl	74_37	+1	known	missense	c.652	p.S218G	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXC5	HGNC	ENSG00000172789				58	0	0	43	15	25.8621
SMUG1	0	genome.wustl.edu	37	12	54576034	54576034	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	54576034	54576034	C	T	SNP	SMUG1	ENST00000337581	human	ensembl	74_37	-1	known	missense	c.659	p.R220Q	1.000	pfam_Uracil-DNA_glycosylase-like,superfamily_Uracil-DNA_glycosylase-like	pfam_Uracil-DNA_glycosylase-like,superfamily_Uracil-DNA_glycosylase-like	-	no_errors	SMUG1	HGNC	ENSG00000123415				93	0	0	54	18	25
SLC39A5	0	genome.wustl.edu	37	12	56629008	56629008	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	56629008	56629008	G	A	SNP	SLC39A5	ENST00000266980	human	ensembl	74_37	+1	known	silent	c.702	p.L234	0.989	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A5	HGNC	ENSG00000139540				259	0	0	291	21	6.73077
ANKRD52	0	genome.wustl.edu	37	12	56639302	56639302	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	56639302	56639302	G	A	SNP	ANKRD52	ENST00000267116	human	ensembl	74_37	-1	known	missense	c.2263	p.R755C	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD52	HGNC	ENSG00000139645				62	0	0	58	17	22.6667
APOF	0	genome.wustl.edu	37	12	56755073	56755073	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	56755073	56755073	T	C	SNP	APOF	ENST00000398189	human	ensembl	74_37	-1	known	missense	c.917	p.Y306C	0.000	NULL	NULL	-	no_errors	APOF	HGNC	ENSG00000175336				164	1	0.606061	91	29	24.1667
NACA	0	genome.wustl.edu	37	12	57111304	57111304	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	57111304	57111304	G	A	SNP	NACA	ENST00000454682	human	ensembl	74_37	-1	known	missense	c.4010	p.A1337V	0.040	NULL	pfam_Nas_poly-pep-assoc_cplx_dom,superfamily_UBA-like,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	NACA	HGNC	ENSG00000196531				57	0	0	53	7	11.6667
NACA	0	genome.wustl.edu	37	12	57111308	57111308	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	57111308	57111308	G	C	SNP	NACA	ENST00000454682	human	ensembl	74_37	-1	known	missense	c.4006	p.P1336A	0.000	NULL	pfam_Nas_poly-pep-assoc_cplx_dom,superfamily_UBA-like,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	NACA	HGNC	ENSG00000196531				62	0	0	54	5	8.47458
ANO2	0	genome.wustl.edu	37	12	5721879	5721879	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	5721879	5721879	C	T	SNP	ANO2	ENST00000356134	human	ensembl	74_37	-1	known	missense	c.2033	p.S678N	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO2	HGNC	ENSG00000047617				68	0	0	50	10	16.6667
LRP1	0	genome.wustl.edu	37	12	57567028	57567028	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	57567028	57567028	C	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.3241	p.R1081C	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				73	0	0	50	11	18.0328
VWF	0	genome.wustl.edu	37	12	6092336	6092336	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	6092336	6092336	C	T	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.7061	p.C2354Y	1.000	pirsf_VWF	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				36	0	0	20	4	16.6667
FAM19A2	0	genome.wustl.edu	37	12	62104161	62104161	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	62104161	62104161	T	G	SNP	FAM19A2	ENST00000551449	human	ensembl	74_37	-1	putative	missense	c.144	p.Q48H	1.000	NULL	NULL	-	no_errors	FAM19A2	HGNC	ENSG00000198673				324	0	0	205	44	17.6707
DPY19L2	0	genome.wustl.edu	37	12	63976277	63976277	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	63976277	63976277	A	G	SNP	DPY19L2	ENST00000324472	human	ensembl	74_37	-1	known	missense	c.1634	p.V545A	0.719	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L2	HGNC	ENSG00000177990				60	0	0	53	6	10.1695
DPY19L2	0	genome.wustl.edu	37	12	64061905	64061905	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	64061905	64061905	G	A	SNP	DPY19L2	ENST00000324472	human	ensembl	74_37	-1	known	missense	c.269	p.A90V	0.137	NULL	pfam_Dpy-19	-	no_errors	DPY19L2	HGNC	ENSG00000177990				178	0	0	131	35	21.0843
GRIP1	0	genome.wustl.edu	37	12	66990656	66990656	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	66990656	66990656	G	A	SNP	GRIP1	ENST00000359742	human	ensembl	74_37	-1	known	missense	c.107	p.A36V	1.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRIP1	HGNC	ENSG00000155974				104	0	0	90	28	23.7288
CAND1	0	genome.wustl.edu	37	12	67706561	67706561	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	67706561	67706561	T	C	SNP	CAND1	ENST00000545606	human	ensembl	74_37	+1	known	missense	c.3644	p.I1215T	1.000	NULL	pfam_TATA-bd_TIP120,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	CAND1	HGNC	ENSG00000111530				147	0	0	121	30	19.8675
PIANP	0	genome.wustl.edu	37	12	6806618	6806618	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	6806618	6806618	G	A	SNP	PIANP	ENST00000320591	human	ensembl	74_37	-1	known	missense	c.358	p.P120S	1.000	NULL	NULL	-	no_errors	PIANP	HGNC	ENSG00000139200				53	0	0	49	15	23.4375
YEATS4	0	genome.wustl.edu	37	12	69753804	69753804	+	Splice_Site	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	69753804	69753804	G	A	SNP	YEATS4	ENST00000247843	human	ensembl	74_37	+1	known	splice_site	c.51+1	e1+1	1.000	-	-	-	no_errors	YEATS4	HGNC	ENSG00000127337				25	0	0	26	6	18.75
TRHDE	0	genome.wustl.edu	37	12	73050744	73050744	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	73050744	73050744	A	G	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.2887	p.S963G	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657				244	0	0	156	40	20.4082
GDF3	0	genome.wustl.edu	37	12	7842986	7842986	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	7842986	7842986	G	A	SNP	GDF3	ENST00000329913	human	ensembl	74_37	-1	known	missense	c.583	p.R195W	0.036	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	GDF3	HGNC	ENSG00000184344				142	0	0	135	8	5.59441
NAV3	0	genome.wustl.edu	37	12	78569092	78569092	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	78569092	78569092	G	A	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.4988	p.R1663H	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798				106	0	0	94	21	18.2609
NR2C1	0	genome.wustl.edu	37	12	95443007	95443007	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	95443007	95443007	G	A	SNP	NR2C1	ENST00000333003	human	ensembl	74_37	-1	known	missense	c.968	p.A323V	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt	-	no_errors	NR2C1	HGNC	ENSG00000120798				176	0	0	125	37	22.8395
FGD6	0	genome.wustl.edu	37	12	95604038	95604038	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	95604038	95604038	G	A	SNP	FGD6	ENST00000343958	human	ensembl	74_37	-1	known	missense	c.1022	p.P341L	0.075	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD6	HGNC	ENSG00000180263				285	0	0	210	52	19.8473
AMDHD1	0	genome.wustl.edu	37	12	96350720	96350720	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	96350720	96350720	C	T	SNP	AMDHD1	ENST00000266736	human	ensembl	74_37	+1	known	silent	c.567	p.C189	1.000	superfamily_Metal-dep_hydrolase_composite,tigrfam_HutI	pfam_Amidohydro_1,pfam_Amidohydro_3,superfamily_Metal-dep_hydrolase_composite,tigrfam_HutI	-	no_errors	AMDHD1	HGNC	ENSG00000139344				189	0	0	172	34	16.5049
ELK3	0	genome.wustl.edu	37	12	96641215	96641215	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	96641215	96641215	C	T	SNP	ELK3	ENST00000228741	human	ensembl	74_37	+1	known	silent	c.705	p.S235	0.002	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELK3	HGNC	ENSG00000111145				223	0	0	174	47	21.267
TMTC4	0	genome.wustl.edu	37	13	101277913	101277913	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	101277913	101277913	G	A	SNP	TMTC4	ENST00000342624	human	ensembl	74_37	-1	known	missense	c.1712	p.A571V	1.000	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_DUF1736,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC4	HGNC	ENSG00000125247				76	0	0	66	6	8.33333
F10	0	genome.wustl.edu	37	13	113803259	113803259	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	113803259	113803259	G	A	SNP	F10	ENST00000375559	human	ensembl	74_37	+1	known	missense	c.895	p.G299S	0.000	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,pfam_GLA_domain,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Peptidase_S1,prints_Peptidase_S1A,prints_GLA_domain,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1	-	no_errors	F10	HGNC	ENSG00000126218				204	0	0	171	53	23.6607
PCID2	0	genome.wustl.edu	37	13	113833353	113833353	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	113833353	113833353	G	A	SNP	PCID2	ENST00000246505	human	ensembl	74_37	-1	known	missense	c.1199	p.A400V	1.000	pfam_PCI_dom	pfam_PCI_dom,smart_PAM	-	no_errors	PCID2	HGNC	ENSG00000126226				105	0	0	83	25	23.1481
PCID2	0	genome.wustl.edu	37	13	113851338	113851338	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	113851338	113851338	T	C	SNP	PCID2	ENST00000246505	human	ensembl	74_37	-1	known	silent	c.420	p.S140	0.000	NULL	pfam_PCI_dom,smart_PAM	-	no_errors	PCID2	HGNC	ENSG00000126226				179	1	0.555556	136	34	20
IFT88	0	genome.wustl.edu	37	13	21264849	21264849	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	21264849	21264849	G	A	SNP	IFT88	ENST00000319980	human	ensembl	74_37	+1	known	missense	c.2275	p.G759S	1.000	NULL	pfam_TPR_1,pfam_TPR_2,pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat,smart_Sel1-like,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFT88	HGNC	ENSG00000032742				150	0	0	141	34	19.4286
ZDHHC20	0	genome.wustl.edu	37	13	21995217	21995217	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	21995217	21995217	C	T	SNP	ZDHHC20	ENST00000400590	human	ensembl	74_37	-1	known	missense	c.232	p.A78T	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC20	HGNC	ENSG00000180776				73	0	0	37	19	33.9286
PARP4	0	genome.wustl.edu	37	13	25009229	25009229	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	25009229	25009229	G	A	SNP	PARP4	ENST00000381989	human	ensembl	74_37	-1	known	silent	c.4050	p.F1350	0.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_VIT,pfam_VWF_A,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_BRCT_dom,smart_BRCT_dom,smart_VIT,smart_VWF_A,pfscan_BRCT_dom,pfscan_VWF_A,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP4	HGNC	ENSG00000102699				103	0	0	97	30	23.622
ATP8A2	0	genome.wustl.edu	37	13	26273359	26273359	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	26273359	26273359	C	T	SNP	ATP8A2	ENST00000381655	human	ensembl	74_37	+1	known	silent	c.2260	p.L754	0.030	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A2	HGNC	ENSG00000132932				137	0	0	115	24	17.2662
WASF3	0	genome.wustl.edu	37	13	27255288	27255288	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	27255288	27255288	G	A	SNP	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	missense	c.814	p.V272M	0.209	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970				145	0	0	120	34	22.0779
FLT1	0	genome.wustl.edu	37	13	28908179	28908179	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	28908179	28908179	G	A	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	missense	c.2576	p.A859V	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755				308	2	0.645161	246	55	18.2724
FRY	0	genome.wustl.edu	37	13	32705925	32705925	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	32705925	32705925	G	A	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	missense	c.833	p.R278Q	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910				184	0	0	146	38	20.6522
BRCA2	0	genome.wustl.edu	37	13	32914985	32914985	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	32914985	32914985	T	C	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	silent	c.6493	p.L2165	0.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618				102	0	0	74	19	20.4301
DCLK1	0	genome.wustl.edu	37	13	36396959	36396959	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	36396959	36396959	G	A	SNP	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	silent	c.1461	p.D487	0.961	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083				173	0	0	108	23	17.5573
NAA16	0	genome.wustl.edu	37	13	41894849	41894849	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	41894849	41894849	T	C	SNP	NAA16	ENST00000379406	human	ensembl	74_37	+1	known	silent	c.291	p.D97	1.000	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_2,pfam_NatA_aux_su,pfam_TPR_1,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA16	HGNC	ENSG00000172766				155	0	0	107	28	20.7407
AKAP11	0	genome.wustl.edu	37	13	42873557	42873557	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	42873557	42873557	T	C	SNP	AKAP11	ENST00000025301	human	ensembl	74_37	+1	known	silent	c.675	p.G225	0.993	NULL	NULL	-	no_errors	AKAP11	HGNC	ENSG00000023516				126	0	0	111	13	10.4839
ENOX1	0	genome.wustl.edu	37	13	43930086	43930086	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	43930086	43930086	G	A	SNP	ENOX1	ENST00000261488	human	ensembl	74_37	-1	known	silent	c.792	p.H264	0.998	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ENOX1	HGNC	ENSG00000120658				221	1	0.45045	208	14	6.30631
CPB2	0	genome.wustl.edu	37	13	46661878	46661878	+	Splice_Site	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	46661878	46661878	A	G	SNP	CPB2	ENST00000181383	human	ensembl	74_37	-1	known	splice_site	c.150+2	e2+2	1.000	-	-	-	no_errors	CPB2	HGNC	ENSG00000080618				94	0	0	69	17	19.7674
FAM124A	0	genome.wustl.edu	37	13	51854975	51854975	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	51854975	51854975	G	T	SNP	FAM124A	ENST00000280057	human	ensembl	74_37	+1	known	silent	c.1332	p.G444	1.000	NULL	NULL	-	no_errors	FAM124A	HGNC	ENSG00000150510				102	0	0	84	15	15.1515
THSD1	0	genome.wustl.edu	37	13	52960165	52960165	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	52960165	52960165	G	A	SNP	THSD1	ENST00000258613	human	ensembl	74_37	-1	known	missense	c.1178	p.A393V	0.465	smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD1	HGNC	ENSG00000136114				63	0	0	62	21	25.3012
PCDH9	0	genome.wustl.edu	37	13	67801400	67801400	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	67801400	67801400	C	A	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	missense	c.1173	p.K391N	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226				287	0	0	220	66	23.0769
SCEL	0	genome.wustl.edu	37	13	78176201	78176201	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	78176201	78176201	A	G	SNP	SCEL	ENST00000349847	human	ensembl	74_37	+1	known	missense	c.919	p.I307V	0.965	NULL	smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	SCEL	HGNC	ENSG00000136155				125	0	0	83	8	8.79121
SLAIN1	0	genome.wustl.edu	37	13	78318470	78318470	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	78318470	78318470	G	A	SNP	SLAIN1	ENST00000466548	human	ensembl	74_37	+1	known	silent	c.753	p.E251	0.999	NULL	NULL	-	no_errors	SLAIN1	HGNC	ENSG00000139737				123	0	0	106	9	7.82609
SLITRK5	0	genome.wustl.edu	37	13	88329581	88329581	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	88329581	88329581	C	T	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	silent	c.1938	p.T646	0.933	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				65	0	0	81	7	7.95455
GPC5	0	genome.wustl.edu	37	13	92345891	92345891	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	92345891	92345891	C	A	SNP	GPC5	ENST00000377067	human	ensembl	74_37	+1	known	missense	c.776	p.P259Q	1.000	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC	ENSG00000179399				96	0	0	88	17	16.1905
ABCC4	0	genome.wustl.edu	37	13	95714990	95714990	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	95714990	95714990	C	T	SNP	ABCC4	ENST00000376887	human	ensembl	74_37	-1	known	missense	c.3334	p.D1112N	0.999	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257				285	0	0	266	14	5
UGGT2	0	genome.wustl.edu	37	13	96529620	96529620	+	Splice_Site	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	96529620	96529620	T	C	SNP	UGGT2	ENST00000376747	human	ensembl	74_37	-1	known	splice_site	c.3388-2	e29-2	1.000	-	-	-	no_errors	UGGT2	HGNC	ENSG00000102595				153	0	0	99	23	18.8525
DOCK9	0	genome.wustl.edu	37	13	99515326	99515326	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	99515326	99515326	C	T	SNP	DOCK9	ENST00000339416	human	ensembl	74_37	-1	known	missense	c.3529	p.V1177I	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK9	HGNC	ENSG00000088387				21	0	0	27	3	10
XRCC3	0	genome.wustl.edu	37	14	104165790	104165790	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	104165790	104165790	C	T	SNP	XRCC3	ENST00000352127	human	ensembl	74_37	-1	known	missense	c.685	p.A229T	0.000	pfam_DNA_recomb/repair_Rad51_C,superfamily_P-loop_NTPase,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd	pfam_DNA_recomb/repair_Rad51_C,superfamily_P-loop_NTPase,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd	-	no_errors	XRCC3	HGNC	ENSG00000126215				56	0	0	55	6	9.83607
AHNAK2	0	genome.wustl.edu	37	14	105414613	105414613	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	105414613	105414613	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.7175	p.P2392L	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				199	0	0	193	46	19.2469
BTBD6	0	genome.wustl.edu	37	14	105716569	105716569	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	105716569	105716569	C	T	SNP	BTBD6	ENST00000392554	human	ensembl	74_37	+1	known	nonsense	c.1018	p.R340*	1.000	pfam_PHR	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD6	HGNC	ENSG00000184887				86	0	0	82	8	8.88889
OR11H12	0	genome.wustl.edu	37	14	19378140	19378140	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	19378140	19378140	T	G	SNP	OR11H12	ENST00000550708	human	ensembl	74_37	+1	known	missense	c.547	p.F183V	0.108	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR11H12	HGNC	ENSG00000257115				118	0	0	84	17	16.8317
POTEG	0	genome.wustl.edu	37	14	19553784	19553784	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	19553784	19553784	A	G	SNP	POTEG	ENST00000409832	human	ensembl	74_37	+1	known	missense	c.368	p.Y123C	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEG	HGNC	ENSG00000222036				522	0	0	516	46	8.18505
ENSG00000244306	0	genome.wustl.edu	37	14	19856951	19856951	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	19856951	19856951	G	A	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306				87	0	0	54	9	14.2857
PARP2	0	genome.wustl.edu	37	14	20813247	20813247	+	Splice_Site	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	20813247	20813247	G	A	SNP	PARP2	ENST00000429687	human	ensembl	74_37	+1	known	splice_site	c.202+1	e2+1	0.003	-	-	-	no_errors	PARP2	HGNC	ENSG00000129484				75	0	0	50	9	15.2542
TMEM55B	0	genome.wustl.edu	37	14	20928395	20928395	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	20928395	20928395	G	T	SNP	TMEM55B	ENST00000398020	human	ensembl	74_37	-1	known	silent	c.417	p.I139	1.000	pfam_Transmembrane_protein_55A/B	pfam_Transmembrane_protein_55A/B	-	no_errors	TMEM55B	HGNC	ENSG00000165782				102	0	0	82	16	16.3265
CHD8	0	genome.wustl.edu	37	14	21871355	21871355	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	21871355	21871355	T	C	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	missense	c.3535	p.I1179V	0.998	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888				79	0	0	66	15	18.5185
ACIN1	0	genome.wustl.edu	37	14	23549510	23549510	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	23549510	23549510	G	A	SNP	ACIN1	ENST00000262710	human	ensembl	74_37	-1	known	missense	c.1208	p.A403V	0.014	NULL	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	ACIN1	HGNC	ENSG00000100813				138	1	0.719424	89	29	24.5763
MYH7	0	genome.wustl.edu	37	14	23901953	23901953	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	23901953	23901953	C	T	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.397	p.V133M	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054				49	0	0	49	9	15.5172
CPNE6	0	genome.wustl.edu	37	14	24546935	24546935	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	24546935	24546935	C	T	SNP	CPNE6	ENST00000537691	human	ensembl	74_37	+1	known	missense	c.1835	p.P612L	0.976	NULL	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE6	HGNC	ENSG00000100884				43	0	0	50	13	20.6349
PSME2	0	genome.wustl.edu	37	14	24613431	24613431	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	24613431	24613431	T	C	SNP	PSME2	ENST00000216802	human	ensembl	74_37	-1	known	missense	c.467	p.K156R	1.000	pfam_Proteasome_activ_pa28_C,superfamily_Proteasome_activ_pa28	pfam_Proteasome_activ_pa28_C,pfam_Proteasome_activ_pa28_N,superfamily_Proteasome_activ_pa28	-	no_errors	PSME2	HGNC	ENSG00000100911				271	0	0	232	42	15.3285
FOXG1	0	genome.wustl.edu	37	14	29237480	29237480	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	29237480	29237480	C	T	SNP	FOXG1	ENST00000313071	human	ensembl	74_37	+1	known	missense	c.995	p.S332L	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXG1	HGNC	ENSG00000176165				144	0	0	97	22	18.4874
MBIP	0	genome.wustl.edu	37	14	36780790	36780790	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	36780790	36780790	C	T	SNP	MBIP	ENST00000416007	human	ensembl	74_37	-1	known	missense	c.779	p.R260Q	1.000	NULL	NULL	-	no_errors	MBIP	HGNC	ENSG00000151332				101	0	0	114	15	11.6279
PAX9	0	genome.wustl.edu	37	14	37132270	37132270	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	37132270	37132270	C	T	SNP	PAX9	ENST00000361487	human	ensembl	74_37	+1	known	missense	c.173	p.A58V	1.000	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX9	HGNC	ENSG00000198807				73	0	0	61	11	15.2778
SEC23A	0	genome.wustl.edu	37	14	39532546	39532546	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	39532546	39532546	A	G	SNP	SEC23A	ENST00000307712	human	ensembl	74_37	-1	known	silent	c.1380	p.Y460	1.000	pfam_Sec23_24_beta_S	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC23A	HGNC	ENSG00000100934				105	0	0	50	21	29.5775
SEC23A	0	genome.wustl.edu	37	14	39565194	39565194	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	39565194	39565194	T	C	SNP	SEC23A	ENST00000307712	human	ensembl	74_37	-1	known	silent	c.129	p.T43	0.885	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC23A	HGNC	ENSG00000100934				169	0	0	124	33	21.0191
CDKL1	0	genome.wustl.edu	37	14	50863894	50863894	+	RNA	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	50863894	50863894	T	C	SNP	CDKL1	ENST00000356146	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CDKL1	HGNC	ENSG00000100490				43	0	0	34	14	29.1667
FRMD6	0	genome.wustl.edu	37	14	52186842	52186842	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	52186842	52186842	G	T	SNP	FRMD6	ENST00000344768	human	ensembl	74_37	+1	known	missense	c.1094	p.R365L	1.000	NULL	pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD6	HGNC	ENSG00000139926				65	0	0	64	22	25.5814
BMP4	0	genome.wustl.edu	37	14	54418806	54418806	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	54418806	54418806	G	T	SNP	BMP4	ENST00000245451	human	ensembl	74_37	-1	known	silent	c.135	p.R45	1.000	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	BMP4	HGNC	ENSG00000125378				107	0	0	89	27	23.2759
EXOC5	0	genome.wustl.edu	37	14	57698340	57698340	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	57698340	57698340	G	T	SNP	EXOC5	ENST00000413566	human	ensembl	74_37	-1	known	silent	c.1032	p.S344	1.000	pfam_Sec10-like	pfam_Sec10-like	-	no_errors	EXOC5	HGNC	ENSG00000070367				141	0	0	101	14	12.1739
SRSF5	0	genome.wustl.edu	37	14	70235592	70235592	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	70235592	70235592	G	A	SNP	SRSF5	ENST00000451983	human	ensembl	74_37	+1	known	missense	c.275	p.R92H	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF5	HGNC	ENSG00000100650				151	0	0	113	23	16.9118
ADAM21	0	genome.wustl.edu	37	14	70925078	70925078	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	70925078	70925078	T	C	SNP	ADAM21	ENST00000267499	human	ensembl	74_37	+1	known	missense	c.862	p.S288P	0.941	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM21	HGNC	ENSG00000139985				272	0	0	271	18	6.22837
RGS6	0	genome.wustl.edu	37	14	73029147	73029147	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	73029147	73029147	G	A	SNP	RGS6	ENST00000553525	human	ensembl	74_37	+1	known	missense	c.1445	p.R482H	1.000	NULL	pfam_RGS_dom,pfam_G-protein_gamma-like_dom,pfam_DEP_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_G-protein_gamma-like_dom,smart_DEP_dom,smart_G-protein_gamma-like_dom,smart_Regulat_G_prot_signal_superfam,pfscan_DEP_dom,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS6	HGNC	ENSG00000182732				61	0	0	55	10	15.3846
C14orf169	0	genome.wustl.edu	37	14	73959137	73959137	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	73959137	73959137	G	A	SNP	C14orf169	ENST00000531973	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	C14orf169	HGNC	ENSG00000255242				53	0	0	45	10	18.1818
LTBP2	0	genome.wustl.edu	37	14	74969608	74969608	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	74969608	74969608	G	A	SNP	LTBP2	ENST00000261978	human	ensembl	74_37	-1	known	missense	c.4918	p.R1640C	1.000	superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP2	HGNC	ENSG00000119681				74	0	0	78	15	16.129
ANGEL1	0	genome.wustl.edu	37	14	77257053	77257053	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	77257053	77257053	G	A	SNP	ANGEL1	ENST00000251089	human	ensembl	74_37	-1	known	missense	c.1753	p.R585C	0.999	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	ANGEL1	HGNC	ENSG00000013523				103	0	0	66	16	19.5122
ADCK1	0	genome.wustl.edu	37	14	78397874	78397874	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	78397874	78397874	G	A	SNP	ADCK1	ENST00000238561	human	ensembl	74_37	+1	known	missense	c.1220	p.R407H	0.999	NULL	pfam_UbiB_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK1	HGNC	ENSG00000063761				66	0	0	65	28	30.1075
NRXN3	0	genome.wustl.edu	37	14	78710088	78710088	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	78710088	78710088	G	A	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.652	p.G218S	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				93	0	0	75	14	15.7303
CEP128	0	genome.wustl.edu	37	14	81366324	81366324	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	81366324	81366324	C	T	SNP	CEP128	ENST00000281129	human	ensembl	74_37	-1	known	missense	c.530	p.R177H	1.000	NULL	NULL	-	no_errors	CEP128	HGNC	ENSG00000100629				155	1	0.641026	108	26	19.403
RIN3	0	genome.wustl.edu	37	14	93125676	93125676	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	93125676	93125676	G	A	SNP	RIN3	ENST00000216487	human	ensembl	74_37	+1	known	missense	c.2197	p.V733M	1.000	pfscan_VPS9	pfam_VPS9,smart_SH2,smart_VPS9_subgr,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN3	HGNC	ENSG00000100599				210	0	0	153	45	22.7273
UNC79	0	genome.wustl.edu	37	14	94158100	94158100	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	94158100	94158100	C	T	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	silent	c.7461	p.S2487	0.692	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				133	0	0	107	25	18.9394
SERPINA6	0	genome.wustl.edu	37	14	94776106	94776106	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	94776106	94776106	G	A	SNP	SERPINA6	ENST00000341584	human	ensembl	74_37	-1	known	missense	c.851	p.T284M	0.731	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA6	HGNC	ENSG00000170099				143	0	0	126	37	22.6994
SYNE3	0	genome.wustl.edu	37	14	95921913	95921913	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	95921913	95921913	C	T	SNP	SYNE3	ENST00000334258	human	ensembl	74_37	-1	known	missense	c.938	p.R313H	0.346	smart_Spectrin/alpha-actinin	pfam_KASH,pfam_Spectrin_repeat,superfamily_Retrov_capsid_C,smart_Spectrin/alpha-actinin,pfscan_KASH	-	no_errors	SYNE3	HGNC	ENSG00000176438				180	0	0	176	36	16.9811
SYNE3	0	genome.wustl.edu	37	14	95923557	95923557	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	95923557	95923557	C	T	SNP	SYNE3	ENST00000334258	human	ensembl	74_37	-1	known	missense	c.746	p.R249Q	0.000	smart_Spectrin/alpha-actinin	pfam_KASH,pfam_Spectrin_repeat,superfamily_Retrov_capsid_C,smart_Spectrin/alpha-actinin,pfscan_KASH	-	no_errors	SYNE3	HGNC	ENSG00000176438				179	0	0	168	18	9.67742
GSKIP	0	genome.wustl.edu	37	14	96851949	96851949	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	96851949	96851949	C	T	SNP	GSKIP	ENST00000438650	human	ensembl	74_37	+1	known	silent	c.348	p.P116	0.956	pfam_DUF727,superfamily_GSKIP_dom	pfam_DUF727,superfamily_GSKIP_dom	-	no_errors	GSKIP	HGNC	ENSG00000100744				299	0	0	195	39	16.6667
PAPOLA	0	genome.wustl.edu	37	14	96986463	96986463	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	96986463	96986463	G	A	SNP	PAPOLA	ENST00000216277	human	ensembl	74_37	+1	known	missense	c.80	p.S27N	1.000	pfam_PolA_pol_cen_dom,pirsf_PolyA_polymerase	pfam_PolA_pol_cen_dom,pfam_PolA_pol_RNA-bd_dom,pfam_Nucleotidyltransferase,superfamily_NuclTrfase_I_C,pirsf_PolyA_polymerase	-	no_errors	PAPOLA	HGNC	ENSG00000090060				223	0	0	204	12	5.55556
CCNK	0	genome.wustl.edu	37	14	99969288	99969288	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	99969288	99969288	G	T	SNP	CCNK	ENST00000389879	human	ensembl	74_37	+1	known	missense	c.978	p.Q326H	1.000	NULL	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNK	HGNC	ENSG00000090061				86	0	0	74	19	20.4301
NIPA1	0	genome.wustl.edu	37	15	23048857	23048857	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	23048857	23048857	A	G	SNP	NIPA1	ENST00000337435	human	ensembl	74_37	-1	known	missense	c.962	p.M321T	1.000	NULL	pfam_Mg_trans_NIPA	-	no_errors	NIPA1	HGNC	ENSG00000170113				139	0	0	114	38	25
NIPA1	0	genome.wustl.edu	37	15	23048996	23048996	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	23048996	23048996	C	T	SNP	NIPA1	ENST00000337435	human	ensembl	74_37	-1	known	missense	c.823	p.A275T	1.000	pfam_Mg_trans_NIPA	pfam_Mg_trans_NIPA	-	no_errors	NIPA1	HGNC	ENSG00000170113				67	0	0	56	6	9.67742
NIPA1	0	genome.wustl.edu	37	15	23049218	23049218	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	23049218	23049218	A	C	SNP	NIPA1	ENST00000337435	human	ensembl	74_37	-1	known	missense	c.601	p.F201V	1.000	pfam_Mg_trans_NIPA	pfam_Mg_trans_NIPA	-	no_errors	NIPA1	HGNC	ENSG00000170113				73	0	0	70	9	11.3924
NDN	0	genome.wustl.edu	37	15	23932081	23932081	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	23932081	23932081	G	A	SNP	NDN	ENST00000331837	human	ensembl	74_37	-1	known	missense	c.284	p.P95L	0.944	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	NDN	HGNC	ENSG00000182636				65	0	0	63	20	24.0964
SNHG14	0	genome.wustl.edu	37	15	25456782	25456782	+	RNA	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	25456782	25456782	A	G	SNP	SNHG14	ENST00000424208	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				27	0	0	37	7	15.9091
ATP10A	0	genome.wustl.edu	37	15	25953381	25953381	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	25953381	25953381	G	A	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.2411	p.A804V	1.000	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190				193	0	0	162	31	16.0622
GABRG3	0	genome.wustl.edu	37	15	27777969	27777969	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	27777969	27777969	T	C	SNP	GABRG3	ENST00000333743	human	ensembl	74_37	+1	known	missense	c.1346	p.F449S	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg3_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG3	HGNC	ENSG00000182256				78	0	0	62	4	6.06061
OCA2	0	genome.wustl.edu	37	15	28090167	28090167	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	28090167	28090167	G	A	SNP	OCA2	ENST00000354638	human	ensembl	74_37	-1	known	silent	c.2370	p.N790	0.989	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	-	no_errors	OCA2	HGNC	ENSG00000104044				75	0	0	65	12	15.5844
GOLGA8F	0	genome.wustl.edu	37	15	28632791	28632791	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	28632791	28632791	T	C	SNP	GOLGA8F	ENST00000526619	human	ensembl	74_37	+1	known	silent	c.717	p.P239	0.044	NULL	NULL	-	no_errors	GOLGA8F	HGNC	ENSG00000153684				67	0	0	64	6	8.57143
APBA2	0	genome.wustl.edu	37	15	29346438	29346438	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	29346438	29346438	C	T	SNP	APBA2	ENST00000558259	human	ensembl	74_37	+1	known	silent	c.351	p.N117	0.991	NULL	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA2	HGNC	ENSG00000034053				153	0	0	134	40	22.9885
RYR3	0	genome.wustl.edu	37	15	33873743	33873743	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	33873743	33873743	G	A	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.1472	p.R491H	1.000	pfam_Ca-rel_channel	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				226	0	0	173	43	19.9074
EIF2AK4	0	genome.wustl.edu	37	15	40308866	40308866	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	40308866	40308866	A	G	SNP	EIF2AK4	ENST00000263791	human	ensembl	74_37	+1	known	missense	c.3923	p.K1308R	1.000	pirsf_Ser/Thr_kinase_GCN2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RWD-domain,superfamily_Kinase-like_dom,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Anticodon-bd,smart_RWD-domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_GCN2,pfscan_RWD-domain,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK4	HGNC	ENSG00000128829				111	0	0	101	30	22.9008
RMDN3	0	genome.wustl.edu	37	15	41029864	41029864	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	41029864	41029864	T	C	SNP	RMDN3	ENST00000260385	human	ensembl	74_37	-1	known	missense	c.1186	p.S396G	1.000	NULL	NULL	-	no_errors	RMDN3	HGNC	ENSG00000137824				126	1	0.787402	107	23	17.6923
INO80	0	genome.wustl.edu	37	15	41362706	41362706	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	41362706	41362706	T	C	SNP	INO80	ENST00000361937	human	ensembl	74_37	-1	known	missense	c.1645	p.K549E	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	INO80	HGNC	ENSG00000128908				155	0	0	123	21	14.5833
ITPKA	0	genome.wustl.edu	37	15	41794637	41794637	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	41794637	41794637	C	T	SNP	ITPKA	ENST00000260386	human	ensembl	74_37	+1	known	missense	c.1046	p.T349M	0.993	pfam_IPK	pfam_IPK	-	no_errors	ITPKA	HGNC	ENSG00000137825				57	0	0	72	9	11.1111
VPS39	0	genome.wustl.edu	37	15	42459039	42459039	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	42459039	42459039	C	T	SNP	VPS39	ENST00000348544	human	ensembl	74_37	-1	known	missense	c.1483	p.V495M	1.000	pfam_VPS39/TGF_beta_rcpt-assoc_1,pfam_Clathrin_H-chain/VPS_repeat	pfam_Citron,pfam_VPS39/TGF_beta_rcpt-assoc_2,pfam_VPS39/TGF_beta_rcpt-assoc_1,pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,smart_Citron	-	no_errors	VPS39	HGNC	ENSG00000166887				233	0	0	200	46	18.6992
ZNF106	0	genome.wustl.edu	37	15	42743481	42743481	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	42743481	42743481	G	T	SNP	ZNF106	ENST00000263805	human	ensembl	74_37	-1	known	missense	c.920	p.P307H	0.990	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_Znf_C2H2-like,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ZNF106	HGNC	ENSG00000103994				177	0	0	120	36	23.0769
CATSPER2P1	0	genome.wustl.edu	37	15	44036306	44036306	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	44036306	44036306	G	A	SNP	CATSPER2P1	ENST00000429276	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CATSPER2P1	HGNC	ENSG00000205771				42	0	0	34	4	10.5263
DUOX2	0	genome.wustl.edu	37	15	45388103	45388103	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	45388103	45388103	C	T	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	missense	c.4003	p.A1335T	1.000	pfam_FAD-bd_8,superfamily_Riboflavin_synthase-like_b-brl	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279				88	0	0	81	17	17.3469
MIR147B	0	genome.wustl.edu	37	15	45725301	45725301	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	45725301	45725301	C	T	SNP	MIR147B	ENST00000390185	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR147B	HGNC	ENSG00000211519				132	0	0	81	22	21.3592
NEDD4	0	genome.wustl.edu	37	15	56134223	56134223	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	56134223	56134223	A	T	SNP	NEDD4	ENST00000508342	human	ensembl	74_37	-1	known	missense	c.3004	p.L1002M	0.259	superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_WW_dom	-	no_errors	NEDD4	HGNC	ENSG00000069869				196	0	0	178	15	7.77202
VPS13C	0	genome.wustl.edu	37	15	62209578	62209578	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	62209578	62209578	G	T	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	silent	c.8017	p.R2673	0.962	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003				95	0	0	64	18	21.9512
TLN2	0	genome.wustl.edu	37	15	63000709	63000709	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	63000709	63000709	C	T	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	silent	c.2181	p.S727	1.000	pfam_ILWEQ_dom	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914				110	0	0	99	23	18.8525
PARP16	0	genome.wustl.edu	37	15	65553245	65553245	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	65553245	65553245	A	G	SNP	PARP16	ENST00000261888	human	ensembl	74_37	-1	known	missense	c.811	p.Y271H	1.000	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP16	HGNC	ENSG00000138617				274	0	0	280	22	7.28477
GLCE	0	genome.wustl.edu	37	15	69561347	69561347	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	69561347	69561347	C	T	SNP	GLCE	ENST00000261858	human	ensembl	74_37	+1	known	missense	c.1618	p.R540C	1.000	pfam_C5-epim	pfam_C5-epim	-	no_errors	GLCE	HGNC	ENSG00000138604				202	0	0	158	44	21.7822
LRRC49	0	genome.wustl.edu	37	15	71276445	71276445	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	71276445	71276445	T	C	SNP	LRRC49	ENST00000260382	human	ensembl	74_37	+1	known	silent	c.1018	p.L340	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC49	HGNC	ENSG00000137821				80	0	0	48	17	26.1538
THSD4	0	genome.wustl.edu	37	15	72063445	72063445	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	72063445	72063445	C	T	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	missense	c.2812	p.R938W	0.967	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720				286	0	0	237	62	20.7358
PKM	0	genome.wustl.edu	37	15	72501132	72501132	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	72501132	72501132	C	T	SNP	PKM	ENST00000319622	human	ensembl	74_37	-1	known	silent	c.666	p.S222	0.009	pfam_Pyrv_Knase_brl,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,tigrfam_Pyr_Knase	pfam_Pyrv_Knase_brl,pfam_Pyrv_Knase_C,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,superfamily_Pyrv_Knase_C,superfamily_Pyrv_Knase-like_insert_dom,prints_Pyr_Knase,tigrfam_Pyr_Knase	-	no_errors	PKM	HGNC	ENSG00000067225				161	0	0	123	42	25.4545
NEO1	0	genome.wustl.edu	37	15	73541998	73541998	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	73541998	73541998	G	T	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	silent	c.1830	p.V610	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141				238	0	0	201	33	14.1026
CIB2	0	genome.wustl.edu	37	15	78401632	78401632	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	78401632	78401632	C	T	SNP	CIB2	ENST00000557917	human	ensembl	74_37	-1	known	missense	c.179	p.C60Y	1.000	NULL	NULL	-	no_errors	CIB2	HGNC	ENSG00000136425				80	0	0	66	17	20.4819
CRABP1	0	genome.wustl.edu	37	15	78633393	78633393	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	78633393	78633393	G	A	SNP	CRABP1	ENST00000299529	human	ensembl	74_37	+1	known	missense	c.79	p.A27T	1.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	CRABP1	HGNC	ENSG00000166426				26	0	0	17	5	22.7273
AP3B2	0	genome.wustl.edu	37	15	83346060	83346060	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	83346060	83346060	A	T	SNP	AP3B2	ENST00000261722	human	ensembl	74_37	-1	known	missense	c.1454	p.I485N	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,pirsf_AP3_beta	-	no_errors	AP3B2	HGNC	ENSG00000103723				53	0	0	36	8	18.1818
LOC283692	0	genome.wustl.edu	37	15	83360781	83360781	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	83360781	83360781	G	A	SNP	LOC283692	ENST00000560650	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-752G15.3	Clone_based_vega_gene	ENSG00000259462				71	0	0	61	18	22.7848
FSD2	0	genome.wustl.edu	37	15	83430979	83430979	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	83430979	83430979	C	A	SNP	FSD2	ENST00000334574	human	ensembl	74_37	-1	known	missense	c.1872	p.W624C	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,prints_Butyrophylin	-	no_errors	FSD2	HGNC	ENSG00000186628				55	0	0	47	8	14.5455
ZNF774	0	genome.wustl.edu	37	15	90904478	90904478	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	90904478	90904478	C	T	SNP	ZNF774	ENST00000354377	human	ensembl	74_37	+1	known	missense	c.1415	p.A472V	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF774	HGNC	ENSG00000196391				242	0	0	181	53	22.6496
SYNM	0	genome.wustl.edu	37	15	99670499	99670499	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	99670499	99670499	G	A	SNP	SYNM	ENST00000336292	human	ensembl	74_37	+1	known	missense	c.1931	p.S644N	0.761	NULL	pfam_IF	-	no_errors	SYNM	HGNC	ENSG00000182253				53	0	0	42	9	17.6471
CIITA	0	genome.wustl.edu	37	16	11017143	11017143	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	11017143	11017143	C	T	SNP	CIITA	ENST00000324288	human	ensembl	74_37	+1	known	missense	c.3376	p.R1126W	0.239	NULL	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,prints_MHC_II_transact	-	no_errors	CIITA	HGNC	ENSG00000179583				177	0	0	138	31	18.3432
SNX29	0	genome.wustl.edu	37	16	12162983	12162983	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	12162983	12162983	G	A	SNP	SNX29	ENST00000306030	human	ensembl	74_37	+1	known	missense	c.158	p.R53Q	0.282	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX29	HGNC	ENSG00000048471				147	0	0	121	8	6.20155
TELO2	0	genome.wustl.edu	37	16	1551487	1551487	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	1551487	1551487	G	A	SNP	TELO2	ENST00000262319	human	ensembl	74_37	+1	known	missense	c.1348	p.A450T	0.000	NULL	pfam_Telomere_length_regulation_dom,superfamily_ARM-type_fold	-	no_errors	TELO2	HGNC	ENSG00000100726				28	0	0	17	4	19.0476
TELO2	0	genome.wustl.edu	37	16	1556320	1556320	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	1556320	1556320	C	T	SNP	TELO2	ENST00000262319	human	ensembl	74_37	+1	known	missense	c.2116	p.R706C	0.010	NULL	pfam_Telomere_length_regulation_dom,superfamily_ARM-type_fold	-	no_errors	TELO2	HGNC	ENSG00000100726				106	0	0	89	16	15.2381
NOMO3	0	genome.wustl.edu	37	16	16349625	16349625	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	16349625	16349625	G	A	SNP	NOMO3	ENST00000399336	human	ensembl	74_37	+1	known	missense	c.1012	p.G338R	1.000	superfamily_CarboxyPept-like_regulatory	pfam_DUF2012,superfamily_CarboxyPept-like_regulatory,superfamily_Carb-bd-like_fold,superfamily_Collagen-bd_Cna_B-typ_dom	-	no_errors	NOMO3	HGNC	ENSG00000103226				72	0	0	52	22	29.7297
CRAMP1L	0	genome.wustl.edu	37	16	1709952	1709952	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	1709952	1709952	G	A	SNP	CRAMP1L	ENST00000293925	human	ensembl	74_37	+1	known	silent	c.2301	p.T767	0.004	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	CRAMP1L	HGNC	ENSG00000007545				52	0	0	63	5	7.35294
RPL3L	0	genome.wustl.edu	37	16	2004000	2004000	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	2004000	2004000	C	T	SNP	RPL3L	ENST00000268661	human	ensembl	74_37	-1	known	silent	c.153	p.A51	0.007	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	-	no_errors	RPL3L	HGNC	ENSG00000140986				18	0	0	16	5	23.8095
GPR139	0	genome.wustl.edu	37	16	20084900	20084900	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	20084900	20084900	C	T	SNP	GPR139	ENST00000570682	human	ensembl	74_37	-1	known	silent	c.39	p.S13	0.998	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR139	HGNC	ENSG00000180269				14	0	0	16	5	23.8095
TBL3	0	genome.wustl.edu	37	16	2027994	2027994	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	2027994	2027994	G	A	SNP	TBL3	ENST00000568546	human	ensembl	74_37	+1	known	missense	c.1994	p.R665Q	0.777	pfam_SSU_processome_Utp13	pfam_WD40_repeat,pfam_SSU_processome_Utp13,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL3	HGNC	ENSG00000183751				62	0	0	60	8	11.7647
PDILT	0	genome.wustl.edu	37	16	20386166	20386166	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	20386166	20386166	T	A	SNP	PDILT	ENST00000302451	human	ensembl	74_37	-1	known	missense	c.659	p.D220V	0.993	superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	PDILT	HGNC	ENSG00000169340				226	0	0	215	34	13.6546
DNAH3	0	genome.wustl.edu	37	16	20974905	20974905	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	20974905	20974905	C	T	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	missense	c.10301	p.G3434D	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486				99	0	0	91	18	16.5138
EARS2	0	genome.wustl.edu	37	16	23563615	23563615	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	23563615	23563615	G	A	SNP	EARS2	ENST00000564668	human	ensembl	74_37	-1	known	missense	c.230	p.T77I	1.000	NULL	NULL	-	no_errors	EARS2	HGNC	ENSG00000103356				96	0	0	93	14	13.0841
RBBP6	0	genome.wustl.edu	37	16	24581665	24581665	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	24581665	24581665	A	C	SNP	RBBP6	ENST00000319715	human	ensembl	74_37	+1	known	missense	c.3654	p.K1218N	1.000	NULL	pfam_DWNN_domain,pfam_Ubox_domain,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_CCHC	-	no_errors	RBBP6	HGNC	ENSG00000122257				114	0	0	67	18	21.1765
GTF3C1	0	genome.wustl.edu	37	16	27503681	27503681	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	27503681	27503681	G	A	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	silent	c.3129	p.C1043	0.766	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235				109	0	0	102	7	6.42202
CCDC64B	0	genome.wustl.edu	37	16	3085468	3085468	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	3085468	3085468	C	T	SNP	CCDC64B	ENST00000389347	human	ensembl	74_37	-1	known	silent	c.30	p.P10	0.030	NULL	superfamily_Sig_transdc_His_kinase_dimeric	-	no_errors	CCDC64B	HGNC	ENSG00000162069				23	0	0	33	9	21.4286
SETD1A	0	genome.wustl.edu	37	16	30990750	30990750	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	30990750	30990750	G	A	SNP	SETD1A	ENST00000262519	human	ensembl	74_37	+1	known	missense	c.3643	p.A1215T	0.999	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1A	HGNC	ENSG00000099381				18	0	0	12	5	29.4118
ZNF668	0	genome.wustl.edu	37	16	31073394	31073394	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	31073394	31073394	G	A	SNP	ZNF668	ENST00000426488	human	ensembl	74_37	-1	known	silent	c.924	p.C308	0.915	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF668	HGNC	ENSG00000167394				50	0	0	47	11	18.9655
ITGAX	0	genome.wustl.edu	37	16	31373185	31373185	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	31373185	31373185	C	T	SNP	ITGAX	ENST00000268296	human	ensembl	74_37	+1	known	silent	c.1041	p.F347	0.739	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAX	HGNC	ENSG00000140678				176	0	0	145	39	21.1957
TGFB1I1	0	genome.wustl.edu	37	16	31485238	31485238	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	31485238	31485238	G	A	SNP	TGFB1I1	ENST00000394863	human	ensembl	74_37	+1	known	missense	c.265	p.G89R	1.000	pirsf_Leupaxin	pfam_Znf_LIM,smart_Znf_LIM,pirsf_Leupaxin,pfscan_Znf_LIM	-	no_errors	TGFB1I1	HGNC	ENSG00000140682				152	0	0	126	33	20.7547
SLC5A2	0	genome.wustl.edu	37	16	31500366	31500366	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	31500366	31500366	G	T	SNP	SLC5A2	ENST00000330498	human	ensembl	74_37	+1	known	missense	c.1446	p.E482D	0.766	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A2	HGNC	ENSG00000140675				63	0	0	51	17	25
ZNF205	0	genome.wustl.edu	37	16	3169295	3169295	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	3169295	3169295	G	A	SNP	ZNF205	ENST00000219091	human	ensembl	74_37	+1	known	missense	c.634	p.V212M	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF205	HGNC	ENSG00000122386				88	0	0	81	30	27.027
SLX4	0	genome.wustl.edu	37	16	3640549	3640549	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	3640549	3640549	C	T	SNP	SLX4	ENST00000294008	human	ensembl	74_37	-1	known	silent	c.3090	p.P1030	0.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	SLX4	HGNC	ENSG00000188827				121	0	0	120	8	6.25
SLX4	0	genome.wustl.edu	37	16	3658536	3658536	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	3658536	3658536	G	A	SNP	SLX4	ENST00000294008	human	ensembl	74_37	-1	known	missense	c.430	p.L144F	0.001	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	SLX4	HGNC	ENSG00000188827				123	0	0	89	35	28.2258
LOC100134368	0	genome.wustl.edu	37	16	436733	436733	+	RNA	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	436733	436733	A	C	SNP	LOC100134368	ENST00000457760	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.413	-	-	-	no_errors	Z97634.3	Clone_based_vega_gene	ENSG00000236829				53	0	0	34	5	12.8205
CDIP1	0	genome.wustl.edu	37	16	4562627	4562627	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	4562627	4562627	C	T	SNP	CDIP1	ENST00000399599	human	ensembl	74_37	-1	known	silent	c.573	p.T191	0.725	pfam_LITAF,smart_LITAF	pfam_LITAF,smart_LITAF	-	no_errors	CDIP1	HGNC	ENSG00000089486				89	0	0	65	15	18.75
VPS35	0	genome.wustl.edu	37	16	46705645	46705645	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	46705645	46705645	C	T	SNP	VPS35	ENST00000299138	human	ensembl	74_37	-1	known	missense	c.1496	p.R499H	0.213	pfam_VPS35,superfamily_ARM-type_fold	pfam_VPS35,superfamily_ARM-type_fold	-	no_errors	VPS35	HGNC	ENSG00000069329				100	0	0	67	20	22.9885
ADCY7	0	genome.wustl.edu	37	16	50347950	50347950	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	50347950	50347950	G	A	SNP	ADCY7	ENST00000254235	human	ensembl	74_37	+1	known	missense	c.2833	p.V945I	0.567	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY7	HGNC	ENSG00000121281				71	0	0	51	18	26.087
OGFOD1	0	genome.wustl.edu	37	16	56485619	56485619	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	56485619	56485619	A	G	SNP	OGFOD1	ENST00000566157	human	ensembl	74_37	+1	known	missense	c.95	p.E32G	0.581	NULL	pfam_Oxoglutarate/Fe-dep_Oase_C,smart_Pro_4_hyd_alph	-	no_errors	OGFOD1	HGNC	ENSG00000087263				90	0	0	93	7	7
NUP93	0	genome.wustl.edu	37	16	56864512	56864512	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	56864512	56864512	G	A	SNP	NUP93	ENST00000308159	human	ensembl	74_37	+1	known	missense	c.1000	p.A334T	1.000	pfam_Nucleoporin_int_Nup93/Nic96	pfam_Nucleoporin_int_Nup93/Nic96	-	no_errors	NUP93	HGNC	ENSG00000102900				225	1	0.442478	164	51	23.7209
DOK4	0	genome.wustl.edu	37	16	57509501	57509501	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	57509501	57509501	G	A	SNP	DOK4	ENST00000340099	human	ensembl	74_37	-1	known	missense	c.206	p.T69M	0.991	pfam_Pleckstrin_homology,smart_Pleckstrin_homology	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK4	HGNC	ENSG00000125170				14	0	0	15	5	25
KATNB1	0	genome.wustl.edu	37	16	57789830	57789830	+	Splice_Site	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	57789830	57789830	G	A	SNP	KATNB1	ENST00000379661	human	ensembl	74_37	+1	known	splice_site	c.1643+1	e16+1	1.000	-	-	-	no_errors	KATNB1	HGNC	ENSG00000140854				44	0	0	39	5	11.3636
PRSS54	0	genome.wustl.edu	37	16	58318533	58318533	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	58318533	58318533	G	A	SNP	PRSS54	ENST00000219301	human	ensembl	74_37	-1	known	silent	c.615	p.C205	0.399	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	-	no_errors	PRSS54	HGNC	ENSG00000103023				206	0	0	129	39	23.2143
NDRG4	0	genome.wustl.edu	37	16	58537768	58537768	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	58537768	58537768	C	T	SNP	NDRG4	ENST00000394282	human	ensembl	74_37	+1	known	missense	c.244	p.R82C	1.000	pfam_Ndr	pfam_Ndr	-	no_errors	NDRG4	HGNC	ENSG00000103034				71	0	0	38	8	17.3913
CMTM4	0	genome.wustl.edu	37	16	66670346	66670346	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	66670346	66670346	G	T	SNP	CMTM4	ENST00000330687	human	ensembl	74_37	-1	known	missense	c.325	p.L109M	1.000	pfam_Marvel	pfam_Marvel	-	no_errors	CMTM4	HGNC	ENSG00000183723				78	0	0	72	19	20.8791
B3GNT9	0	genome.wustl.edu	37	16	67183705	67183705	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	67183705	67183705	G	A	SNP	B3GNT9	ENST00000449549	human	ensembl	74_37	-1	known	silent	c.684	p.G228	0.989	pfam_Glyco_trans_31,pfam_Fringe-like	pfam_Glyco_trans_31,pfam_Fringe-like	-	no_errors	B3GNT9	HGNC	ENSG00000237172				27	0	0	27	6	18.1818
SLC9A5	0	genome.wustl.edu	37	16	67290816	67290816	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	67290816	67290816	G	A	SNP	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	missense	c.1135	p.V379I	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740				119	0	0	103	21	16.9355
PRMT7	0	genome.wustl.edu	37	16	68373230	68373230	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	68373230	68373230	T	A	SNP	PRMT7	ENST00000339507	human	ensembl	74_37	+1	known	missense	c.510	p.N170K	0.001	pirsf_Arg_MeTrfase_PRMT7	pfam_Ribosomal-L11_MeTrfase_PrmA,pirsf_Arg_MeTrfase_PRMT7	-	no_errors	PRMT7	HGNC	ENSG00000132600				108	0	0	84	25	22.9358
NFAT5	0	genome.wustl.edu	37	16	69681374	69681374	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	69681374	69681374	C	T	SNP	NFAT5	ENST00000432919	human	ensembl	74_37	+1	known	nonsense	c.697	p.R233*	1.000	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFAT5	HGNC	ENSG00000102908				129	0	0	92	24	20.6897
DHX38	0	genome.wustl.edu	37	16	72141255	72141255	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	72141255	72141255	G	A	SNP	DHX38	ENST00000268482	human	ensembl	74_37	+1	known	missense	c.2617	p.A873T	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX38	HGNC	ENSG00000140829				71	0	0	67	14	17.284
ZFHX3	0	genome.wustl.edu	37	16	72834006	72834006	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	72834006	72834006	A	G	SNP	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	missense	c.3887	p.M1296T	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				139	0	0	113	10	8.13008
ZFHX3	0	genome.wustl.edu	37	16	72993954	72993954	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	72993954	72993954	G	T	SNP	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	missense	c.91	p.H31N	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				126	0	0	102	25	19.685
WWOX	0	genome.wustl.edu	37	16	79245555	79245555	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	79245555	79245555	G	A	SNP	WWOX	ENST00000539474	human	ensembl	74_37	+1	putative	missense	c.536	p.R179K	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWOX	HGNC	ENSG00000186153				113	0	0	114	7	5.78512
CDYL2	0	genome.wustl.edu	37	16	80638416	80638416	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	80638416	80638416	G	A	SNP	CDYL2	ENST00000570137	human	ensembl	74_37	-1	known	missense	c.1390	p.R464W	0.961	NULL	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL2	HGNC	ENSG00000166446				232	0	0	183	41	18.3036
GAN	0	genome.wustl.edu	37	16	81398967	81398967	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	81398967	81398967	G	A	SNP	GAN	ENST00000568107	human	ensembl	74_37	+1	known	silent	c.1386	p.V462	0.964	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	GAN	HGNC	ENSG00000261609				349	0	0	317	76	19.3384
MSLNL	0	genome.wustl.edu	37	16	830412	830412	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	830412	830412	C	T	SNP	MSLNL	ENST00000293892	human	ensembl	74_37	-1	known	missense	c.589	p.V197M	0.000	NULL	pfam_Mesothelin	-	no_errors	MSLNL	HGNC	ENSG00000162006				138	0	0	142	32	18.3908
TAF1C	0	genome.wustl.edu	37	16	84217343	84217343	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	84217343	84217343	C	T	SNP	TAF1C	ENST00000378541	human	ensembl	74_37	-1	known	silent	c.180	p.P60	0.002	NULL	superfamily_WD40_repeat_dom	-	no_errors	TAF1C	HGNC	ENSG00000103168				81	0	0	68	15	18.0723
FOXF1	0	genome.wustl.edu	37	16	86544680	86544680	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	86544680	86544680	A	G	SNP	FOXF1	ENST00000262426	human	ensembl	74_37	+1	known	missense	c.505	p.T169A	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXF1	HGNC	ENSG00000103241				47	0	0	41	9	18
MTHFSD	0	genome.wustl.edu	37	16	86575788	86575788	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	86575788	86575788	G	A	SNP	MTHFSD	ENST00000567539	human	ensembl	74_37	-1	known	missense	c.152	p.P51L	0.295	NULL	NULL	-	no_errors	MTHFSD	HGNC	ENSG00000103248				84	0	0	65	22	25.2874
ZC3H18	0	genome.wustl.edu	37	16	88695190	88695190	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	88695190	88695190	C	T	SNP	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	missense	c.2494	p.R832C	1.000	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545				128	0	0	123	11	8.20896
SNAI3	0	genome.wustl.edu	37	16	88748042	88748042	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	88748042	88748042	C	T	SNP	SNAI3	ENST00000332281	human	ensembl	74_37	-1	known	missense	c.157	p.G53S	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI3	HGNC	ENSG00000185669				31	0	0	22	5	18.5185
USP7	0	genome.wustl.edu	37	16	8987926	8987926	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	8987926	8987926	C	T	SNP	USP7	ENST00000344836	human	ensembl	74_37	-1	known	missense	c.3238	p.D1080N	1.000	NULL	pfam_Peptidase_C19/C67,pfam_MATH,pfam_USP7_ICP0-binding_dom,superfamily_TRAF-like,smart_MATH,pfscan_MATH,pfscan_Peptidase_C19/C67	-	no_errors	USP7	HGNC	ENSG00000187555				155	0	0	129	41	24.1176
TUBB3	0	genome.wustl.edu	37	16	90000046	90000046	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	90000046	90000046	G	A	SNP	TUBB3	ENST00000553967	human	ensembl	74_37	+1	putative	missense	c.337	p.V113M	0.000	NULL	pfam_Tubulin_FtsZ_GTPase,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,prints_Tubulin,prints_Beta_tubulin	-	no_errors	TUBB3	Uniprot_gn	ENSG00000258947				83	0	0	77	22	22.2222
DNAH9	0	genome.wustl.edu	37	17	11648122	11648122	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	11648122	11648122	C	T	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	silent	c.6120	p.Y2040	0.977	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				115	0	0	73	22	23.1579
MAP2K4	0	genome.wustl.edu	37	17	12016623	12016623	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	12016623	12016623	G	A	SNP	MAP2K4	ENST00000415385	human	ensembl	74_37	+1	known	silent	c.792	p.Q264	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K4	HGNC	ENSG00000065559				159	0	0	149	31	17.2222
MAP2K4	0	genome.wustl.edu	37	17	12028690	12028690	+	Splice_Site	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	12028690	12028690	T	C	SNP	MAP2K4	ENST00000415385	human	ensembl	74_37	+1	known	splice_site	c.924+2	e9+2	1.000	-	-	-	no_errors	MAP2K4	HGNC	ENSG00000065559				175	0	0	111	21	15.9091
YWHAE	0	genome.wustl.edu	37	17	1264466	1264466	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	1264466	1264466	C	T	SNP	YWHAE	ENST00000264335	human	ensembl	74_37	-1	known	silent	c.498	p.T166	0.952	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	-	no_errors	YWHAE	HGNC	ENSG00000108953				287	2	0.692042	213	51	19.3182
MYO1C	0	genome.wustl.edu	37	17	1373490	1373490	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	1373490	1373490	C	T	SNP	MYO1C	ENST00000359786	human	ensembl	74_37	-1	known	silent	c.2505	p.T835	0.003	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1C	HGNC	ENSG00000197879				22	0	0	17	3	15
COX10	0	genome.wustl.edu	37	17	14110390	14110390	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	14110390	14110390	C	T	SNP	COX10	ENST00000261643	human	ensembl	74_37	+1	known	missense	c.1192	p.R398C	1.000	pfam_UbiA_prenyltransferase,pirsf_Protohaem_IX_farnesylTrfase_mt,tigrfam_Protohaem_IX_farnesylTrfase	pfam_UbiA_prenyltransferase,pirsf_Protohaem_IX_farnesylTrfase_mt,tigrfam_Protohaem_IX_farnesylTrfase	-	no_errors	COX10	HGNC	ENSG00000006695				135	0	0	103	26	20.155
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				156	1	0.636943	138	49	26.2032
RILP	0	genome.wustl.edu	37	17	1549887	1549887	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	1549887	1549887	G	T	SNP	RILP	ENST00000301336	human	ensembl	74_37	-1	known	missense	c.1055	p.A352D	0.005	NULL	pfam_RILP,pfam_JNK/Rab-associated_protein-1_N	-	no_errors	RILP	HGNC	ENSG00000167705				202	1	0.492611	190	41	17.7489
FAM211A	0	genome.wustl.edu	37	17	16365691	16365691	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	16365691	16365691	T	C	SNP	FAM211A	ENST00000470794	human	ensembl	74_37	-1	known	missense	c.256	p.M86V	1.000	NULL	NULL	-	no_errors	FAM211A	HGNC	ENSG00000181350				36	0	0	31	9	22.5
WDR81	0	genome.wustl.edu	37	17	1637274	1637274	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	1637274	1637274	C	T	SNP	WDR81	ENST00000409644	human	ensembl	74_37	+1	known	missense	c.4943	p.S1648L	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC	ENSG00000167716				91	0	0	104	23	18.1102
PEMT	0	genome.wustl.edu	37	17	17415893	17415893	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	17415893	17415893	C	T	SNP	PEMT	ENST00000255389	human	ensembl	74_37	-1	known	silent	c.396	p.A132	0.001	pfam_Phopholipid_MeTrfase,pirsf_PEMT/MFAP	pfam_Phopholipid_MeTrfase,pirsf_PEMT/MFAP	-	no_errors	PEMT	HGNC	ENSG00000133027				17	0	0	18	5	21.7391
MYO15A	0	genome.wustl.edu	37	17	18062941	18062941	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	18062941	18062941	A	G	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.9251	p.D3084G	0.998	smart_MyTH4_dom,pfscan_MyTH4_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				68	0	0	67	10	12.987
SMCR8	0	genome.wustl.edu	37	17	18219725	18219725	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	18219725	18219725	G	A	SNP	SMCR8	ENST00000406438	human	ensembl	74_37	+1	known	missense	c.622	p.V208M	1.000	NULL	pfam_Folliculin	-	no_errors	SMCR8	HGNC	ENSG00000176994				94	0	0	81	25	23.5849
FBXW10	0	genome.wustl.edu	37	17	18653319	18653319	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	18653319	18653319	C	T	SNP	FBXW10	ENST00000308799	human	ensembl	74_37	+1	known	missense	c.955	p.P319S	0.113	superfamily_F-box_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW10	HGNC	ENSG00000171931				205	1	0.485437	257	50	16.2866
AKAP10	0	genome.wustl.edu	37	17	19839741	19839741	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	19839741	19839741	T	C	SNP	AKAP10	ENST00000225737	human	ensembl	74_37	-1	known	missense	c.1325	p.Y442C	1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	AKAP10	HGNC	ENSG00000108599				69	0	0	54	5	8.47458
FAM27L	0	genome.wustl.edu	37	17	21826146	21826146	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	21826146	21826146	C	T	SNP	FAM27L	ENST00000426869	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FAM27L	HGNC	ENSG00000178130				122	0	0	100	14	12.2807
SRR	0	genome.wustl.edu	37	17	2222212	2222212	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	2222212	2222212	C	T	SNP	SRR	ENST00000344595	human	ensembl	74_37	+1	known	missense	c.388	p.P130S	0.683	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	-	no_errors	SRR	HGNC	ENSG00000167720				227	0	0	187	14	6.96517
SUPT6H	0	genome.wustl.edu	37	17	27016406	27016406	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	27016406	27016406	C	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.3169	p.R1057C	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				173	1	0.574713	153	36	19.0476
RAB34	0	genome.wustl.edu	37	17	27042506	27042506	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	27042506	27042506	G	T	SNP	RAB34	ENST00000447716	human	ensembl	74_37	-1	known	missense	c.570	p.N190K	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB34	HGNC	ENSG00000109113				93	0	0	87	23	20.9091
COPRS	0	genome.wustl.edu	37	17	30183884	30183884	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	30183884	30183884	C	T	SNP	COPRS	ENST00000302362	human	ensembl	74_37	-1	known	missense	c.100	p.A34T	0.252	NULL	NULL	-	no_errors	COPRS	HGNC	ENSG00000172301				569	0	0	533	44	7.62565
MYO1D	0	genome.wustl.edu	37	17	31048090	31048090	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	31048090	31048090	G	A	SNP	MYO1D	ENST00000318217	human	ensembl	74_37	-1	known	missense	c.1864	p.R622C	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1D	HGNC	ENSG00000176658				332	0	0	298	17	5.39683
AP2B1	0	genome.wustl.edu	37	17	33954650	33954650	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	33954650	33954650	G	A	SNP	AP2B1	ENST00000312678	human	ensembl	74_37	+1	known	missense	c.1060	p.V354I	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,pfam_HEAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Armadillo,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP2B1	HGNC	ENSG00000006125				140	0	0	111	34	23.4483
AP2B1	0	genome.wustl.edu	37	17	34050800	34050800	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	34050800	34050800	G	A	SNP	AP2B1	ENST00000545922	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AP2B1	HGNC	ENSG00000006125				53	0	0	37	7	15.9091
C17orf66	0	genome.wustl.edu	37	17	34182245	34182245	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	34182245	34182245	C	A	SNP	C17orf66	ENST00000311880	human	ensembl	74_37	-1	known	missense	c.1535	p.R512L	0.046	NULL	superfamily_ARM-type_fold	-	no_errors	C17orf66	HGNC	ENSG00000172653				335	0	0	266	56	17.3913
ACACA	0	genome.wustl.edu	37	17	35486328	35486328	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	35486328	35486328	G	A	SNP	ACACA	ENST00000353139	human	ensembl	74_37	-1	known	silent	c.5907	p.Y1969	1.000	pfam_Carboxyl_trans,pfscan_COA_CT_C	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACA	HGNC	ENSG00000132142				66	0	0	66	21	24.1379
MLLT6	0	genome.wustl.edu	37	17	36861965	36861965	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	36861965	36861965	G	T	SNP	MLLT6	ENST00000325718	human	ensembl	74_37	+1	known	missense	c.80	p.G27V	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT6	HGNC	ENSG00000108292				64	0	0	63	10	13.6986
PCGF2	0	genome.wustl.edu	37	17	36896593	36896593	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	36896593	36896593	G	A	SNP	PCGF2	ENST00000360797	human	ensembl	74_37	-1	known	silent	c.63	p.C21	0.990	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PCGF2	HGNC	ENSG00000056661				88	0	0	87	14	13.8614
ZPBP2	0	genome.wustl.edu	37	17	38026975	38026975	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	38026975	38026975	T	A	SNP	ZPBP2	ENST00000348931	human	ensembl	74_37	+1	known	missense	c.147	p.N49K	0.836	pfscan_Ig-like_dom	pfam_Sp38-bd,pfscan_Ig-like_dom	-	no_errors	ZPBP2	HGNC	ENSG00000186075				85	0	0	87	11	11.2245
SMARCE1	0	genome.wustl.edu	37	17	38793825	38793825	+	Splice_Site	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	38793825	38793825	C	A	SNP	SMARCE1	ENST00000348513	human	ensembl	74_37	-1	known	splice_site	c.157-1	e4-1	1.000	-	-	-	no_errors	SMARCE1	HGNC	ENSG00000073584				157	0	0	120	34	22.0779
KRT25	0	genome.wustl.edu	37	17	38907553	38907553	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	38907553	38907553	G	A	SNP	KRT25	ENST00000312150	human	ensembl	74_37	-1	known	missense	c.695	p.A232V	0.296	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT25	HGNC	ENSG00000204897				93	0	0	60	4	6.25
KRT27	0	genome.wustl.edu	37	17	38935850	38935850	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	38935850	38935850	G	A	SNP	KRT27	ENST00000301656	human	ensembl	74_37	-1	known	silent	c.876	p.D292	0.000	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT27	HGNC	ENSG00000171446				58	0	0	53	12	18.4615
KRT27	0	genome.wustl.edu	37	17	38938700	38938700	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	38938700	38938700	C	T	SNP	KRT27	ENST00000301656	human	ensembl	74_37	-1	known	missense	c.46	p.G16R	0.058	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT27	HGNC	ENSG00000171446				14	0	0	14	3	17.6471
KRTAP3-3	0	genome.wustl.edu	37	17	39150246	39150246	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	39150246	39150246	G	A	SNP	KRTAP3-3	ENST00000391586	human	ensembl	74_37	-1	known	missense	c.104	p.T35I	1.000	pfam_Keratin_matx	pfam_Keratin_matx	-	no_errors	KRTAP3-3	HGNC	ENSG00000212899				145	0	0	150	30	16.6667
KRTAP4-6	0	genome.wustl.edu	37	17	39296555	39296555	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	39296555	39296555	C	T	SNP	KRTAP4-6	ENST00000345847	human	ensembl	74_37	-1	known	missense	c.185	p.R62H	0.000	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-6	HGNC	ENSG00000198090				76	0	0	57	16	21.9178
KRTAP4-1	0	genome.wustl.edu	37	17	39340883	39340883	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	39340883	39340883	C	T	SNP	KRTAP4-1	ENST00000398472	human	ensembl	74_37	-1	known	missense	c.224	p.R75H	0.840	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-1	HGNC	ENSG00000198443				39	0	0	36	4	10
KRT38	0	genome.wustl.edu	37	17	39596889	39596889	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	39596889	39596889	A	G	SNP	KRT38	ENST00000246646	human	ensembl	74_37	-1	known	silent	c.285	p.Y95	0.000	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT38	HGNC	ENSG00000171360				128	1	0.775194	122	31	20.2614
KRT38	0	genome.wustl.edu	37	17	39596907	39596907	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	39596907	39596907	A	G	SNP	KRT38	ENST00000246646	human	ensembl	74_37	-1	known	silent	c.267	p.I89	0.000	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT38	HGNC	ENSG00000171360				123	0	0	95	29	23.3871
KRT15	0	genome.wustl.edu	37	17	39674627	39674627	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	39674627	39674627	G	A	SNP	KRT15	ENST00000393981	human	ensembl	74_37	-1	known	missense	c.41	p.A14V	0.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT15	HGNC	ENSG00000171346				118	0	0	80	36	31.0345
KLHL11	0	genome.wustl.edu	37	17	40011390	40011390	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	40011390	40011390	C	T	SNP	KLHL11	ENST00000319121	human	ensembl	74_37	-1	known	silent	c.729	p.T243	0.666	pfam_BACK,smart_BACK	pfam_BACK,pfam_BTB_POZ,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL11	HGNC	ENSG00000178502				186	0	0	123	39	24.0741
DHX58	0	genome.wustl.edu	37	17	40253855	40253855	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	40253855	40253855	C	T	SNP	DHX58	ENST00000251642	human	ensembl	74_37	-1	known	missense	c.1961	p.R654H	0.005	pfam_RIG-I_C-RD	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX58	HGNC	ENSG00000108771				78	0	0	86	13	13.1313
STAT5B	0	genome.wustl.edu	37	17	40371806	40371806	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	40371806	40371806	G	A	SNP	STAT5B	ENST00000293328	human	ensembl	74_37	-1	known	missense	c.605	p.T202M	1.000	pfam_STAT_TF_alpha,superfamily_STAT_TF_coiled-coil	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5B	HGNC	ENSG00000173757				44	0	0	26	15	36.5854
STAT5A	0	genome.wustl.edu	37	17	40459717	40459717	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	40459717	40459717	A	G	SNP	STAT5A	ENST00000345506	human	ensembl	74_37	+1	known	missense	c.1882	p.T628A	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5A	HGNC	ENSG00000126561				64	0	0	52	14	21.2121
BRCA1	0	genome.wustl.edu	37	17	41246445	41246445	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	41246445	41246445	T	C	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	missense	c.1103	p.E368G	0.210	pirsf_BRCA1	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048				525	0	0	504	38	7.01107
MPP3	0	genome.wustl.edu	37	17	41908667	41908667	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	41908667	41908667	T	C	SNP	MPP3	ENST00000398389	human	ensembl	74_37	-1	known	missense	c.167	p.Y56C	1.000	pfam_L27_C,smart_L27,pfscan_L27	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_PDZ,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP3	HGNC	ENSG00000161647				128	0	0	91	31	25.4098
SLC25A39	0	genome.wustl.edu	37	17	42397752	42397752	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	42397752	42397752	A	G	SNP	SLC25A39	ENST00000377095	human	ensembl	74_37	-1	known	missense	c.854	p.V285A	0.936	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A39	HGNC	ENSG00000013306				47	0	0	49	5	9.25926
GPATCH8	0	genome.wustl.edu	37	17	42475537	42475537	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	42475537	42475537	G	A	SNP	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	missense	c.3908	p.A1303V	1.000	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566				161	0	0	186	10	5.10204
GPATCH8	0	genome.wustl.edu	37	17	42476193	42476193	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	42476193	42476193	G	A	SNP	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	silent	c.3252	p.D1084	0.967	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566				124	0	0	90	20	18.1818
FZD2	0	genome.wustl.edu	37	17	42635082	42635082	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	42635082	42635082	G	A	SNP	FZD2	ENST00000315323	human	ensembl	74_37	+1	known	missense	c.26	p.R9H	0.999	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD2	HGNC	ENSG00000180340				11	0	0	9	5	35.7143
PLEKHM1	0	genome.wustl.edu	37	17	43531400	43531400	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	43531400	43531400	G	A	SNP	PLEKHM1	ENST00000430334	human	ensembl	74_37	-1	known	silent	c.1818	p.R606	0.003	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Run,superfamily_Znf_FYVE_PHD,smart_Run,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Pleckstrin_homology,pfscan_Run,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PLEKHM1	HGNC	ENSG00000225190				74	0	0	63	8	11.2676
PLEKHM1	0	genome.wustl.edu	37	17	43553069	43553069	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	43553069	43553069	T	C	SNP	PLEKHM1	ENST00000430334	human	ensembl	74_37	-1	known	missense	c.320	p.H107R	1.000	pfam_Run,pfscan_Run	pfam_Run,superfamily_Znf_FYVE_PHD,smart_Run,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Pleckstrin_homology,pfscan_Run,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PLEKHM1	HGNC	ENSG00000225190				24	0	0	22	4	15.3846
CRHR1	0	genome.wustl.edu	37	17	43906680	43906680	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	43906680	43906680	C	T	SNP	CRHR1	ENST00000398285	human	ensembl	74_37	+1	known	missense	c.427	p.R143W	1.000	pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF1_rcpt,prints_GPCR_2_diuretic_rcpt	-	no_errors	CRHR1	HGNC	ENSG00000120088				51	0	0	31	14	31.1111
SPPL2C	0	genome.wustl.edu	37	17	43922863	43922863	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	43922863	43922863	A	G	SNP	SPPL2C	ENST00000329196	human	ensembl	74_37	+1	known	silent	c.591	p.T197	0.114	NULL	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Preselin/SPP	-	no_errors	SPPL2C	HGNC	ENSG00000185294				90	0	0	83	15	15.3061
NGFR	0	genome.wustl.edu	37	17	47587858	47587858	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	47587858	47587858	C	A	SNP	NGFR	ENST00000172229	human	ensembl	74_37	+1	known	missense	c.653	p.P218H	0.781	NULL	pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_16	-	no_errors	NGFR	HGNC	ENSG00000064300				113	0	0	86	14	14
XYLT2	0	genome.wustl.edu	37	17	48433494	48433494	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	48433494	48433494	G	A	SNP	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	missense	c.1354	p.V452M	0.999	pfam_Glyco_trans_14	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532				92	0	0	59	19	24.359
XYLT2	0	genome.wustl.edu	37	17	48435836	48435836	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	48435836	48435836	C	T	SNP	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	missense	c.2210	p.P737L	0.807	NULL	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532				65	0	0	47	10	17.5439
RSAD1	0	genome.wustl.edu	37	17	48561095	48561095	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	48561095	48561095	C	T	SNP	RSAD1	ENST00000258955	human	ensembl	74_37	+1	known	missense	c.1081	p.R361C	0.992	pfam_HemN_C_dom,tigrfam_Coprogen_oxidase_HemN-rel	pfam_HemN_C_dom,pfam_rSAM,smart_Elp3/MiaB/NifB,tigrfam_Coprogen_oxidase_HemN-rel	-	no_errors	RSAD1	HGNC	ENSG00000136444				103	0	0	63	15	19.2308
ENO3	0	genome.wustl.edu	37	17	4858823	4858823	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	4858823	4858823	G	A	SNP	ENO3	ENST00000323997	human	ensembl	74_37	+1	known	silent	c.789	p.S263	0.456	pfam_Enolase_C,pirsf_Enolase,tigrfam_Enolase	pfam_Enolase_C,pfam_Enolase_N,pfam_MeAsp_NH4-lyase_C,pirsf_Enolase,prints_Enolase,tigrfam_Enolase	-	no_errors	ENO3	HGNC	ENSG00000108515				405	0	0	272	94	25.6831
CAMTA2	0	genome.wustl.edu	37	17	4883674	4883674	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	4883674	4883674	G	A	SNP	CAMTA2	ENST00000414043	human	ensembl	74_37	-1	known	nonsense	c.1012	p.R338*	0.810	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA2	HGNC	ENSG00000108509				43	0	0	38	6	13.6364
NME1-NME2	0	genome.wustl.edu	37	17	49247316	49247316	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	49247316	49247316	G	A	SNP	NME1-NME2	ENST00000608447	human	ensembl	74_37	+1	known	missense	c.667	p.V223M	1.000	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,prints_Nucleoside_diP_kinase	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,prints_Nucleoside_diP_kinase	-	no_errors	NME1-NME2	HGNC	ENSG00000243678				114	0	0	86	13	13.1313
KIF2B	0	genome.wustl.edu	37	17	51900915	51900915	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	51900915	51900915	G	A	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	missense	c.521	p.R174H	0.800	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200				99	0	0	117	7	5.64516
C1QBP	0	genome.wustl.edu	37	17	5337060	5337060	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	5337060	5337060	C	T	SNP	C1QBP	ENST00000225698	human	ensembl	74_37	-1	known	missense	c.505	p.V169M	1.000	pfam_MAM33,superfamily_MAM33	pfam_MAM33,superfamily_MAM33	-	no_errors	C1QBP	HGNC	ENSG00000108561				274	0	0	154	42	21.4286
NLRP1	0	genome.wustl.edu	37	17	5418368	5418368	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	5418368	5418368	C	T	SNP	NLRP1	ENST00000572272	human	ensembl	74_37	-1	known	silent	c.4128	p.P1376	0.000	superfamily_DEATH-like_dom	pfam_CARD,pfam_DAPIN,pfam_Leu-rich_rpt,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD,pfscan_DAPIN,prints_Disease_R	-	no_errors	NLRP1	HGNC	ENSG00000091592				46	0	0	55	11	16.6667
MPO	0	genome.wustl.edu	37	17	56348170	56348170	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	56348170	56348170	G	T	SNP	MPO	ENST00000340482	human	ensembl	74_37	-1	known	silent	c.2181	p.A727	0.621	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	MPO	HGNC	ENSG00000005381				93	0	0	100	8	7.40741
MTMR4	0	genome.wustl.edu	37	17	56584616	56584616	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	56584616	56584616	G	A	SNP	MTMR4	ENST00000323456	human	ensembl	74_37	-1	known	missense	c.730	p.R244C	1.000	pfam_Myotubularin-like_Pase_dom	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR4	HGNC	ENSG00000108389				93	0	0	64	4	5.88235
C17orf47	0	genome.wustl.edu	37	17	56620624	56620624	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	56620624	56620624	G	A	SNP	C17orf47	ENST00000321691	human	ensembl	74_37	-1	known	silent	c.924	p.S308	0.000	NULL	NULL	-	no_errors	C17orf47	HGNC	ENSG00000181013				127	0	0	109	39	26.3514
CLTC	0	genome.wustl.edu	37	17	57760780	57760780	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	57760780	57760780	G	A	SNP	CLTC	ENST00000269122	human	ensembl	74_37	+1	known	nonsense	c.4074	p.W1358*	1.000	pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTC	HGNC	ENSG00000141367				114	0	0	112	6	5.08475
USP32	0	genome.wustl.edu	37	17	58343335	58343335	+	Splice_Site	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	58343335	58343335	A	G	SNP	USP32	ENST00000300896	human	ensembl	74_37	-1	known	splice_site	c.927+2	e8+2	1.000	-	-	-	no_errors	USP32	HGNC	ENSG00000170832				168	0	0	102	28	21.5385
TBX4	0	genome.wustl.edu	37	17	59560552	59560552	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	59560552	59560552	C	T	SNP	TBX4	ENST00000393853	human	ensembl	74_37	+1	known	missense	c.1316	p.P439L	0.998	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX4	HGNC	ENSG00000121075				100	0	0	88	20	18.5185
MED13	0	genome.wustl.edu	37	17	60059688	60059688	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	60059688	60059688	G	A	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	missense	c.3676	p.R1226C	1.000	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510				306	0	0	219	58	20.9386
TANC2	0	genome.wustl.edu	37	17	61466684	61466684	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	61466684	61466684	A	G	SNP	TANC2	ENST00000424789	human	ensembl	74_37	+1	known	missense	c.2608	p.I870V	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC2	HGNC	ENSG00000170921				101	0	0	52	26	33.3333
KCNH6	0	genome.wustl.edu	37	17	61611294	61611294	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	61611294	61611294	G	A	SNP	KCNH6	ENST00000583023	human	ensembl	74_37	+1	known	silent	c.723	p.A241	0.348	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_ELK,prints_2pore_dom_K_chnl,pfscan_cNMP-bd_dom	-	no_errors	KCNH6	HGNC	ENSG00000173826				96	0	0	91	27	22.8814
MAP3K3	0	genome.wustl.edu	37	17	61710073	61710073	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	61710073	61710073	G	A	SNP	MAP3K3	ENST00000361357	human	ensembl	74_37	+1	known	missense	c.37	p.D13N	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K3	HGNC	ENSG00000198909				117	0	0	93	17	15.4545
CSHL1	0	genome.wustl.edu	37	17	61987659	61987659	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	61987659	61987659	G	A	SNP	CSHL1	ENST00000309894	human	ensembl	74_37	-1	known	silent	c.334	p.L112	1.000	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	CSHL1	HGNC	ENSG00000204414				90	0	0	94	8	7.84314
APOH	0	genome.wustl.edu	37	17	64216830	64216830	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	64216830	64216830	G	A	SNP	APOH	ENST00000205948	human	ensembl	74_37	-1	known	missense	c.446	p.T149M	0.002	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_Sushi_2,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	APOH	HGNC	ENSG00000091583				178	1	0.558659	145	42	22.4599
PITPNC1	0	genome.wustl.edu	37	17	65628318	65628318	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	65628318	65628318	C	T	SNP	PITPNC1	ENST00000335257	human	ensembl	74_37	+1	known	silent	c.426	p.C142	0.877	pfam_PI_transfer	pfam_PI_transfer,prints_PI_transfer	-	no_errors	PITPNC1	HGNC	ENSG00000154217				78	0	0	77	7	8.33333
KPNA2	0	genome.wustl.edu	37	17	66039402	66039402	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	66039402	66039402	C	T	SNP	KPNA2	ENST00000330459	human	ensembl	74_37	+1	known	nonsense	c.853	p.R285*	1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,pfam_Importin-a_IBB,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA2	HGNC	ENSG00000182481				532	0	0	403	93	18.75
SLC16A6	0	genome.wustl.edu	37	17	66265357	66265357	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	66265357	66265357	T	C	SNP	SLC16A6	ENST00000327268	human	ensembl	74_37	-1	known	silent	c.1452	p.S484	0.013	superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A6	HGNC	ENSG00000108932				73	0	0	60	16	21.0526
ABCA8	0	genome.wustl.edu	37	17	66924149	66924149	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	66924149	66924149	C	T	SNP	ABCA8	ENST00000430352	human	ensembl	74_37	-1	known	missense	c.1181	p.G394D	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA8	HGNC	ENSG00000141338				83	0	0	68	19	21.8391
GLOD4	0	genome.wustl.edu	37	17	679152	679152	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	679152	679152	G	A	SNP	GLOD4	ENST00000301328	human	ensembl	74_37	-1	known	missense	c.314	p.T105M	0.996	NULL	NULL	-	no_errors	GLOD4	HGNC	ENSG00000167699				162	0	0	112	21	15.7895
DVL2	0	genome.wustl.edu	37	17	7131021	7131021	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	7131021	7131021	C	T	SNP	DVL2	ENST00000005340	human	ensembl	74_37	-1	known	missense	c.1184	p.G395D	1.000	NULL	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_2,prints_Dishevelled_fam	-	no_errors	DVL2	HGNC	ENSG00000004975				31	0	0	30	3	9.09091
KIAA0195	0	genome.wustl.edu	37	17	73491708	73491708	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	73491708	73491708	C	T	SNP	KIAA0195	ENST00000314256	human	ensembl	74_37	+1	known	silent	c.2928	p.T976	0.071	NULL	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	KIAA0195	HGNC	ENSG00000177728				284	1	0.350877	222	67	23.1834
TRIM65	0	genome.wustl.edu	37	17	73888555	73888555	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	73888555	73888555	C	A	SNP	TRIM65	ENST00000269383	human	ensembl	74_37	-1	known	missense	c.537	p.W179C	0.000	NULL	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM65	HGNC	ENSG00000141569				45	0	0	31	7	18.4211
FBF1	0	genome.wustl.edu	37	17	73919411	73919411	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	73919411	73919411	A	G	SNP	FBF1	ENST00000389570	human	ensembl	74_37	-1	known	missense	c.1238	p.L413P	0.000	NULL	superfamily_HRDC-like	-	no_errors	FBF1	HGNC	ENSG00000188878				18	0	0	13	3	18.75
ACOX1	0	genome.wustl.edu	37	17	73947496	73947496	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	73947496	73947496	C	A	SNP	ACOX1	ENST00000293217	human	ensembl	74_37	-1	known	missense	c.1107	p.E369D	1.000	superfamily_AcylCo_DH/oxidase_C,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX1	HGNC	ENSG00000161533				133	0	0	94	40	29.8507
EVPL	0	genome.wustl.edu	37	17	74005700	74005700	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	74005700	74005700	C	T	SNP	EVPL	ENST00000301607	human	ensembl	74_37	-1	known	missense	c.3586	p.V1196I	0.028	superfamily_Ferritin-like_SF,smart_Plectin_repeat	pfam_Plectin_repeat,superfamily_Ferritin-like_SF,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	EVPL	HGNC	ENSG00000167880				109	0	0	99	19	16.1017
CHD3	0	genome.wustl.edu	37	17	7794025	7794025	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	7794025	7794025	G	A	SNP	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	missense	c.350	p.R117Q	1.000	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				10	0	0	17	5	22.7273
CCDC40	0	genome.wustl.edu	37	17	78023884	78023884	+	Silent	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	78023884	78023884	C	A	SNP	CCDC40	ENST00000397545	human	ensembl	74_37	+1	known	silent	c.961	p.R321	0.003	NULL	pfam_E3_ubiquit_lig_BRE1	-	no_errors	CCDC40	HGNC	ENSG00000141519				58	0	0	35	7	16.6667
CHD3	0	genome.wustl.edu	37	17	7803219	7803219	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	7803219	7803219	G	T	SNP	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	missense	c.2550	p.E850D	0.996	pfam_SNF2_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				114	0	0	120	9	6.97674
C17orf70	0	genome.wustl.edu	37	17	79508401	79508401	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	79508401	79508401	G	A	SNP	C17orf70	ENST00000327787	human	ensembl	74_37	-1	known	silent	c.2448	p.A816	0.231	NULL	NULL	-	no_errors	C17orf70	HGNC	ENSG00000185504				25	0	0	11	7	38.8889
C17orf70	0	genome.wustl.edu	37	17	79517607	79517607	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	79517607	79517607	C	T	SNP	C17orf70	ENST00000327787	human	ensembl	74_37	-1	known	missense	c.913	p.E305K	0.002	NULL	NULL	-	no_errors	C17orf70	HGNC	ENSG00000185504				136	0	0	94	30	24.1935
RAC3	0	genome.wustl.edu	37	17	79991663	79991663	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	79991663	79991663	G	A	SNP	RAC3	ENST00000306897	human	ensembl	74_37	+1	known	silent	c.537	p.P179	0.126	superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAC3	HGNC	ENSG00000169750				21	0	0	18	5	21.7391
DUS1L	0	genome.wustl.edu	37	17	80017938	80017938	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	80017938	80017938	C	T	SNP	DUS1L	ENST00000306796	human	ensembl	74_37	-1	known	missense	c.1054	p.A352T	0.001	NULL	pfam_tRNA_hU_synthase	-	no_errors	DUS1L	HGNC	ENSG00000169718				38	0	0	30	9	23.0769
ARHGEF15	0	genome.wustl.edu	37	17	8215418	8215418	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	8215418	8215418	C	T	SNP	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	missense	c.61	p.R21C	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844				69	0	0	62	23	27.0588
MYH10	0	genome.wustl.edu	37	17	8404186	8404186	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	8404186	8404186	T	C	SNP	MYH10	ENST00000396239	human	ensembl	74_37	-1	known	silent	c.3672	p.T1224	0.000	pfam_Myosin_tail,superfamily_UBA-like	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026				268	0	0	183	44	19.3833
RCVRN	0	genome.wustl.edu	37	17	9804356	9804356	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	9804356	9804356	G	A	SNP	RCVRN	ENST00000226193	human	ensembl	74_37	-1	known	missense	c.443	p.P148L	0.998	pfscan_EF_hand_dom,prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	RCVRN	HGNC	ENSG00000109047				118	0	0	88	22	20
TUBB6	0	genome.wustl.edu	37	18	12308711	12308711	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	12308711	12308711	A	G	SNP	TUBB6	ENST00000317702	human	ensembl	74_37	+1	known	missense	c.83	p.H28R	1.000	pfam_Tubulin_FtsZ_GTPase,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,prints_Tubulin,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Gamma_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB6	HGNC	ENSG00000176014				91	0	0	94	6	6
SPIRE1	0	genome.wustl.edu	37	18	12454398	12454398	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	12454398	12454398	G	C	SNP	SPIRE1	ENST00000409402	human	ensembl	74_37	-1	known	missense	c.1723	p.L575V	1.000	superfamily_Znf_FYVE_PHD	superfamily_Znf_FYVE_PHD,smart_KIND	-	no_errors	SPIRE1	HGNC	ENSG00000134278				327	0	0	248	73	22.7414
POTEC	0	genome.wustl.edu	37	18	14542736	14542736	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	14542736	14542736	C	T	SNP	POTEC	ENST00000358970	human	ensembl	74_37	-1	known	missense	c.410	p.R137Q	0.000	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEC	HGNC	ENSG00000183206				211	0	0	166	43	20.5742
ANKRD30B	0	genome.wustl.edu	37	18	14791465	14791465	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	14791465	14791465	C	T	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	silent	c.1800	p.F600	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777				74	0	0	38	11	22.449
CHST9	0	genome.wustl.edu	37	18	24722722	24722722	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	24722722	24722722	G	A	SNP	CHST9	ENST00000284224	human	ensembl	74_37	-1	known	silent	c.52	p.L18	1.000	NULL	pfam_Sulfotransferase	-	no_errors	CHST9	HGNC	ENSG00000154080				224	0	0	169	37	17.9612
MOCOS	0	genome.wustl.edu	37	18	33775270	33775270	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	33775270	33775270	C	T	SNP	MOCOS	ENST00000261326	human	ensembl	74_37	+1	known	missense	c.193	p.L65F	1.000	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	pfam_MOSC_N,pfam_MoCF_Sase_C,pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,superfamily_Pyrv_Knase-like_insert_dom	-	no_errors	MOCOS	HGNC	ENSG00000075643				205	0	0	153	42	21.5385
CELF4	0	genome.wustl.edu	37	18	34854283	34854283	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	34854283	34854283	G	A	SNP	CELF4	ENST00000590112	human	ensembl	74_37	-1	known	missense	c.740	p.T247M	0.928	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF4	HGNC	ENSG00000101489				134	0	0	127	12	8.63309
PIK3C3	0	genome.wustl.edu	37	18	39570520	39570520	+	Splice_Site	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	39570520	39570520	T	C	SNP	PIK3C3	ENST00000262039	human	ensembl	74_37	+1	known	splice_site	c.714+2	e6+2	1.000	-	-	-	no_errors	PIK3C3	HGNC	ENSG00000078142				91	0	0	82	7	7.86517
SETBP1	0	genome.wustl.edu	37	18	42531185	42531185	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	42531185	42531185	G	A	SNP	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	missense	c.1880	p.R627H	1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217				111	0	0	81	23	22.1154
SLC14A1	0	genome.wustl.edu	37	18	43328373	43328373	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	43328373	43328373	G	A	SNP	SLC14A1	ENST00000589700	human	ensembl	74_37	+1	putative	nonsense	c.831	p.W277*	0.134	pirsf_Urea_transporter	pfam_Urea_transporter,pirsf_Urea_transporter	-	no_errors	SLC14A1	HGNC	ENSG00000141469				349	0	0	252	68	21.25
EPB41L3	0	genome.wustl.edu	37	18	5443867	5443867	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	5443867	5443867	G	T	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	missense	c.499	p.P167T	1.000	pirsf_Band_41_protein,pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397				181	0	0	138	35	20.2312
TMEM200C	0	genome.wustl.edu	37	18	5891983	5891983	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	5891983	5891983	C	T	SNP	TMEM200C	ENST00000383490	human	ensembl	74_37	-1	known	missense	c.80	p.R27H	1.000	pfam_DUF2371_TMEM200	pfam_DUF2371_TMEM200	-	no_errors	TMEM200C	HGNC	ENSG00000206432				42	0	0	46	12	20.6897
CDH20	0	genome.wustl.edu	37	18	59221564	59221564	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	59221564	59221564	C	T	SNP	CDH20	ENST00000262717	human	ensembl	74_37	+1	known	missense	c.2042	p.A681V	0.997	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH20	HGNC	ENSG00000101542				93	0	0	75	26	25.7426
PHLPP1	0	genome.wustl.edu	37	18	60609077	60609077	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	60609077	60609077	G	A	SNP	PHLPP1	ENST00000262719	human	ensembl	74_37	+1	known	silent	c.3087	p.V1029	1.000	NULL	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom,pfscan_Pleckstrin_homology	-	no_errors	PHLPP1	HGNC	ENSG00000081913				98	0	0	72	10	12.1951
SERPINB8	0	genome.wustl.edu	37	18	61654298	61654298	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	61654298	61654298	C	T	SNP	SERPINB8	ENST00000353706	human	ensembl	74_37	+1	known	missense	c.911	p.T304I	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB8	HGNC	ENSG00000166401				126	0	0	106	25	19.084
CD226	0	genome.wustl.edu	37	18	67563239	67563239	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	67563239	67563239	G	A	SNP	CD226	ENST00000280200	human	ensembl	74_37	-1	known	missense	c.425	p.S142L	0.175	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD226	HGNC	ENSG00000150637				76	0	0	76	4	5
TIMM21	0	genome.wustl.edu	37	18	71825638	71825638	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	71825638	71825638	C	T	SNP	TIMM21	ENST00000169551	human	ensembl	74_37	+1	known	nonsense	c.670	p.R224*	0.984	pfam_Tim21	pfam_Tim21	-	no_errors	TIMM21	HGNC	ENSG00000075336				63	0	0	35	9	20.4545
ZNF236	0	genome.wustl.edu	37	18	74639309	74639309	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	74639309	74639309	T	C	SNP	ZNF236	ENST00000253159	human	ensembl	74_37	+1	known	missense	c.4244	p.L1415P	0.002	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF236	HGNC	ENSG00000130856				102	1	0.970874	70	18	20.4545
SALL3	0	genome.wustl.edu	37	18	76757103	76757103	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	76757103	76757103	C	T	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	silent	c.3684	p.N1228	0.834	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				221	0	0	126	37	22.6994
NFATC1	0	genome.wustl.edu	37	18	77170868	77170868	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	77170868	77170868	C	T	SNP	NFATC1	ENST00000427363	human	ensembl	74_37	+1	known	missense	c.593	p.A198V	0.991	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC1	HGNC	ENSG00000131196				110	0	0	119	29	19.5946
NFATC1	0	genome.wustl.edu	37	18	77287538	77287538	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	77287538	77287538	A	G	SNP	NFATC1	ENST00000427363	human	ensembl	74_37	+1	known	missense	c.2793	p.I931M	0.888	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC1	HGNC	ENSG00000131196				110	0	0	123	9	6.81818
CTDP1	0	genome.wustl.edu	37	18	77475153	77475153	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	77475153	77475153	G	A	SNP	CTDP1	ENST00000299543	human	ensembl	74_37	+1	known	missense	c.1693	p.G565R	0.999	NULL	pfam_FCP1_C,pfam_NIF,superfamily_HAD-like_dom,superfamily_BRCT_dom,superfamily_Single_hybrid_motif,smart_NIF,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_NIF,tigrfam_FCP1_euk	-	no_errors	CTDP1	HGNC	ENSG00000060069				16	0	0	20	6	23.0769
PTPRM	0	genome.wustl.edu	37	18	8370934	8370934	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	8370934	8370934	A	G	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	missense	c.3104	p.D1035G	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482				182	0	0	145	37	20.3297
TXNDC2	0	genome.wustl.edu	37	18	9887504	9887504	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	9887504	9887504	A	G	SNP	TXNDC2	ENST00000306084	human	ensembl	74_37	+1	known	missense	c.1028	p.D343G	0.000	pfam_Glutenin	pfam_Thioredoxin_domain,pfam_Glutenin,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC2	HGNC	ENSG00000168454				180	0	0	161	34	17.4359
TXNDC2	0	genome.wustl.edu	37	18	9887579	9887579	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	9887579	9887579	A	T	SNP	TXNDC2	ENST00000306084	human	ensembl	74_37	+1	known	missense	c.1103	p.Q368L	0.000	pfam_Glutenin	pfam_Thioredoxin_domain,pfam_Glutenin,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC2	HGNC	ENSG00000168454				156	0	0	156	26	14.2857
GRIN3B	0	genome.wustl.edu	37	19	1004645	1004645	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	1004645	1004645	C	T	SNP	GRIN3B	ENST00000234389	human	ensembl	74_37	+1	known	missense	c.1145	p.A382V	0.999	superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN3B	HGNC	ENSG00000116032				14	0	0	18	6	25
SMARCA4	0	genome.wustl.edu	37	19	11097631	11097631	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	11097631	11097631	G	A	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.811	p.G271R	0.998	NULL	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				72	0	0	63	10	13.6986
RGL3	0	genome.wustl.edu	37	19	11527510	11527510	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	11527510	11527510	C	T	SNP	RGL3	ENST00000393423	human	ensembl	74_37	-1	known	missense	c.371	p.G124E	0.772	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL3	HGNC	ENSG00000205517				81	0	0	99	22	18.1818
PRKCSH	0	genome.wustl.edu	37	19	11552119	11552119	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	11552119	11552119	C	T	SNP	PRKCSH	ENST00000252455	human	ensembl	74_37	+1	known	missense	c.415	p.R139C	1.000	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_LDrepeatLR_classA_rpt,pfscan_EF_hand_dom	-	no_errors	PRKCSH	HGNC	ENSG00000130175				195	0	0	183	42	18.6667
RAD23A	0	genome.wustl.edu	37	19	13063564	13063564	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	13063564	13063564	C	T	SNP	RAD23A	ENST00000586534	human	ensembl	74_37	+1	known	missense	c.875	p.A292V	0.171	superfamily_XPC-bd,superfamily_UBA-like,tigrfam_Rad23	pfam_XPC-bd,pfam_UBA/Ts_N,pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,superfamily_XPC-bd,superfamily_UBA-like,smart_Ubiquitin_dom,smart_UBA/transl_elong_EF1B_N_euk,smart_STI1_HS-bd,prints_Rad23,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup,tigrfam_Rad23	-	no_errors	RAD23A	HGNC	ENSG00000179262				75	0	0	55	17	23.6111
APC2	0	genome.wustl.edu	37	19	1468467	1468467	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	1468467	1468467	G	A	SNP	APC2	ENST00000233607	human	ensembl	74_37	+1	known	missense	c.5167	p.G1723R	0.847	NULL	pfam_APC_basic_dom,pfam_APC_dom,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Armadillo	-	no_errors	APC2	HGNC	ENSG00000115266				16	0	0	29	3	9.375
OR7C1	0	genome.wustl.edu	37	19	14910551	14910551	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	14910551	14910551	G	A	SNP	OR7C1	ENST00000248073	human	ensembl	74_37	-1	known	missense	c.398	p.T133M	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7C1	HGNC	ENSG00000127530				155	0	0	129	28	17.8344
CYP4F3	0	genome.wustl.edu	37	19	15752380	15752380	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	15752380	15752380	C	T	SNP	CYP4F3	ENST00000221307	human	ensembl	74_37	+1	known	missense	c.155	p.P52L	0.951	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F3	HGNC	ENSG00000186529				107	0	0	92	16	14.8148
OR10H2	0	genome.wustl.edu	37	19	15839703	15839703	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	15839703	15839703	C	T	SNP	OR10H2	ENST00000305899	human	ensembl	74_37	+1	known	missense	c.850	p.P284S	0.420	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H2	HGNC	ENSG00000171942				122	0	0	115	7	5.7377
CYP4F2	0	genome.wustl.edu	37	19	16003188	16003188	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	16003188	16003188	C	T	SNP	CYP4F2	ENST00000221700	human	ensembl	74_37	-1	known	silent	c.456	p.T152	0.989	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-II	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F2	HGNC	ENSG00000186115				139	0	0	136	19	12.2581
CHERP	0	genome.wustl.edu	37	19	16632356	16632356	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	16632356	16632356	G	A	SNP	CHERP	ENST00000546361	human	ensembl	74_37	-1	known	missense	c.2090	p.P697L	0.999	NULL	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872				16	0	0	14	3	17.6471
MED26	0	genome.wustl.edu	37	19	16689216	16689216	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	16689216	16689216	C	T	SNP	MED26	ENST00000263390	human	ensembl	74_37	-1	known	missense	c.77	p.R26Q	1.000	superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	MED26	HGNC	ENSG00000105085				84	0	0	84	29	25.6637
NWD1	0	genome.wustl.edu	37	19	16874647	16874647	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	16874647	16874647	G	A	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	silent	c.2142	p.P714	0.789	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039				91	0	0	87	20	18.6916
PLVAP	0	genome.wustl.edu	37	19	17476311	17476311	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	17476311	17476311	C	T	SNP	PLVAP	ENST00000252590	human	ensembl	74_37	-1	known	silent	c.963	p.A321	0.007	pfam_PV-1	pfam_PV-1	-	no_errors	PLVAP	HGNC	ENSG00000130300				79	0	0	60	17	22.0779
KIAA1683	0	genome.wustl.edu	37	19	18368203	18368203	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	18368203	18368203	C	T	SNP	KIAA1683	ENST00000392413	human	ensembl	74_37	-1	known	silent	c.3891	p.P1297	0.000	superfamily_P-loop_NTPase	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	KIAA1683	HGNC	ENSG00000130518				51	0	0	28	5	15.1515
KIAA1683	0	genome.wustl.edu	37	19	18368702	18368702	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	18368702	18368702	C	T	SNP	KIAA1683	ENST00000392413	human	ensembl	74_37	-1	known	missense	c.3392	p.R1131H	0.003	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	KIAA1683	HGNC	ENSG00000130518				57	0	0	57	8	12.3077
ZNF101	0	genome.wustl.edu	37	19	19790992	19790992	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	19790992	19790992	G	C	SNP	ZNF101	ENST00000318110	human	ensembl	74_37	+1	known	missense	c.1194	p.Q398H	0.010	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF101	HGNC	ENSG00000181896				109	0	0	68	18	20.9302
ZNF676	0	genome.wustl.edu	37	19	22363169	22363169	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	22363169	22363169	T	C	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	silent	c.1350	p.K450	0.120	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				314	0	0	243	20	7.60456
ZNF676	0	genome.wustl.edu	37	19	22363511	22363511	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	22363511	22363511	G	A	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	silent	c.1008	p.P336	0.087	pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				270	0	0	215	24	10.0418
ZNF676	0	genome.wustl.edu	37	19	22363521	22363521	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	22363521	22363521	C	G	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.998	p.G333A	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				277	0	0	218	24	9.91736
ZNF676	0	genome.wustl.edu	37	19	22363543	22363543	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	22363543	22363543	C	T	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.976	p.E326K	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				281	0	0	201	25	11.0619
ZNF676	0	genome.wustl.edu	37	19	22363549	22363549	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	22363549	22363549	G	A	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.970	p.L324F	0.561	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				286	0	0	207	23	10
ZNF676	0	genome.wustl.edu	37	19	22375886	22375886	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	22375886	22375886	A	T	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.62	p.I21N	0.490	superfamily_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				159	0	0	147	9	5.76923
ZNF91	0	genome.wustl.edu	37	19	23543818	23543818	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	23543818	23543818	C	G	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	missense	c.1963	p.E655Q	0.998	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232				202	0	0	184	10	5.15464
ZNF681	0	genome.wustl.edu	37	19	23927062	23927062	+	Silent	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	23927062	23927062	A	C	SNP	ZNF681	ENST00000402377	human	ensembl	74_37	-1	known	silent	c.1290	p.A430	0.241	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF681	HGNC	ENSG00000196172				74	0	0	54	10	15.625
SLC39A3	0	genome.wustl.edu	37	19	2737213	2737213	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	2737213	2737213	C	T	SNP	SLC39A3	ENST00000269740	human	ensembl	74_37	-1	known	missense	c.43	p.V15M	0.621	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A3	HGNC	ENSG00000141873				51	0	0	46	4	8
THOP1	0	genome.wustl.edu	37	19	2813270	2813270	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	2813270	2813270	G	T	SNP	THOP1	ENST00000307741	human	ensembl	74_37	+1	known	missense	c.2066	p.C689F	1.000	NULL	pfam_Pept_M3A_M3B	-	no_errors	THOP1	HGNC	ENSG00000172009				17	0	0	7	6	46.1538
PPAP2C	0	genome.wustl.edu	37	19	287508	287508	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	287508	287508	A	G	SNP	PPAP2C	ENST00000327790	human	ensembl	74_37	-1	known	missense	c.511	p.C171R	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2C	HGNC	ENSG00000141934				162	1	0.613497	163	38	18.9055
PPAP2C	0	genome.wustl.edu	37	19	287537	287537	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	287537	287537	C	T	SNP	PPAP2C	ENST00000327790	human	ensembl	74_37	-1	known	missense	c.482	p.C161Y	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2C	HGNC	ENSG00000141934				172	0	0	206	11	5.06912
ZNF556	0	genome.wustl.edu	37	19	2877353	2877353	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	2877353	2877353	A	G	SNP	ZNF556	ENST00000307635	human	ensembl	74_37	+1	known	missense	c.397	p.N133D	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF556	HGNC	ENSG00000172000				133	0	0	103	24	18.8976
CCNE1	0	genome.wustl.edu	37	19	30313408	30313408	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	30313408	30313408	G	T	SNP	CCNE1	ENST00000262643	human	ensembl	74_37	+1	known	missense	c.1008	p.M336I	1.000	pfam_Cyclin_C-dom,superfamily_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNE1	HGNC	ENSG00000105173				218	0	0	172	40	18.8679
RHPN2	0	genome.wustl.edu	37	19	33487079	33487079	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	33487079	33487079	G	A	SNP	RHPN2	ENST00000254260	human	ensembl	74_37	-1	known	missense	c.1273	p.R425W	0.684	pfam_BRO1_dom,pfscan_BRO1_dom	pfam_BRO1_dom,pfam_HR1_rho-bd,superfamily_HR1_rho-bd,superfamily_PDZ,smart_HR1_rho-bd,smart_PDZ,pfscan_BRO1_dom	-	no_errors	RHPN2	HGNC	ENSG00000131941				39	0	0	40	11	21.5686
NFIC	0	genome.wustl.edu	37	19	3382066	3382066	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	3382066	3382066	G	A	SNP	NFIC	ENST00000443272	human	ensembl	74_37	+1	known	silent	c.387	p.R129	0.985	pfam_MAD_homology1_Dwarfin-type,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIC	HGNC	ENSG00000141905				120	0	0	93	30	24.3902
MAG	0	genome.wustl.edu	37	19	35791095	35791095	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	35791095	35791095	A	T	SNP	MAG	ENST00000392213	human	ensembl	74_37	+1	known	missense	c.758	p.E253V	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MAG	HGNC	ENSG00000105695				10	0	0	10	3	23.0769
COX6B1	0	genome.wustl.edu	37	19	36149530	36149530	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	36149530	36149530	C	T	SNP	COX6B1	ENST00000246554	human	ensembl	74_37	+1	known	missense	c.242	p.T81M	0.975	pfam_Cyt_c_oxidase_su6B,superfamily_Cyt_c_oxidase_su6B,pirsf_Cyt_c_oxidase_su6B	pfam_Cyt_c_oxidase_su6B,superfamily_Cyt_c_oxidase_su6B,pirsf_Cyt_c_oxidase_su6B	-	no_errors	COX6B1	HGNC	ENSG00000126267				94	0	0	88	12	12
ARHGAP33	0	genome.wustl.edu	37	19	36276343	36276343	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	36276343	36276343	G	A	SNP	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	missense	c.1900	p.A634T	0.725	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777				115	0	0	101	26	20.4724
ARHGAP33	0	genome.wustl.edu	37	19	36277956	36277956	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	36277956	36277956	G	T	SNP	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	nonsense	c.2584	p.G862*	0.724	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777				19	0	0	24	3	11.1111
PRODH2	0	genome.wustl.edu	37	19	36293120	36293120	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	36293120	36293120	T	C	SNP	PRODH2	ENST00000301175	human	ensembl	74_37	-1	known	missense	c.1399	p.M467V	1.000	pfam_Proline_DH	pfam_Proline_DH	-	no_errors	PRODH2	HGNC	ENSG00000250799				155	1	0.641026	133	24	15.2866
APLP1	0	genome.wustl.edu	37	19	36369799	36369799	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	36369799	36369799	C	T	SNP	APLP1	ENST00000221891	human	ensembl	74_37	+1	known	missense	c.1658	p.A553V	0.991	NULL	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,smart_Amyloid_glyco_extra,prints_Amyloid_glyco	-	no_errors	APLP1	HGNC	ENSG00000105290				152	0	0	163	10	5.78035
ZNF527	0	genome.wustl.edu	37	19	37871245	37871245	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	37871245	37871245	A	C	SNP	ZNF527	ENST00000436120	human	ensembl	74_37	+1	known	missense	c.227	p.E76A	0.008	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF527	HGNC	ENSG00000189164				82	0	0	60	12	16.6667
ZFR2	0	genome.wustl.edu	37	19	3834969	3834969	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	3834969	3834969	C	T	SNP	ZFR2	ENST00000262961	human	ensembl	74_37	-1	known	silent	c.66	p.P22	0.000	NULL	pfam_DZF,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR2	HGNC	ENSG00000105278				18	0	0	16	6	27.2727
GGN	0	genome.wustl.edu	37	19	38876360	38876360	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	38876360	38876360	G	A	SNP	GGN	ENST00000334928	human	ensembl	74_37	-1	known	silent	c.1542	p.P514	0.006	NULL	NULL	-	no_errors	GGN	HGNC	ENSG00000179168				29	0	0	19	8	29.6296
SUPT5H	0	genome.wustl.edu	37	19	39964163	39964163	+	Splice_Site	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	39964163	39964163	T	C	SNP	SUPT5H	ENST00000432763	human	ensembl	74_37	+1	known	splice_site	c.2492+2	e24+2	1.000	-	-	-	no_errors	SUPT5H	HGNC	ENSG00000196235				79	0	0	61	11	15.2778
PIAS4	0	genome.wustl.edu	37	19	4024034	4024034	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	4024034	4024034	T	C	SNP	PIAS4	ENST00000262971	human	ensembl	74_37	+1	known	missense	c.455	p.V152A	1.000	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS4	HGNC	ENSG00000105229				71	0	0	50	9	15.2542
C19orf47	0	genome.wustl.edu	37	19	40832280	40832280	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	40832280	40832280	G	A	SNP	C19orf47	ENST00000582783	human	ensembl	74_37	-1	known	missense	c.664	p.R222C	0.983	NULL	superfamily_SAM/pointed	-	no_errors	C19orf47	HGNC	ENSG00000160392				85	0	0	63	24	27.5862
SPTBN4	0	genome.wustl.edu	37	19	40993644	40993644	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	40993644	40993644	G	T	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	missense	c.210	p.W70C	1.000	pirsf_Spectrin_bsu,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460				76	0	0	55	10	15.3846
CYP2A13	0	genome.wustl.edu	37	19	41595958	41595958	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	41595958	41595958	C	T	SNP	CYP2A13	ENST00000330436	human	ensembl	74_37	+1	known	missense	c.350	p.A117V	0.109	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A13	HGNC	ENSG00000197838				32	0	0	23	4	14.8148
CEACAM4	0	genome.wustl.edu	37	19	42128059	42128059	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	42128059	42128059	G	T	SNP	CEACAM4	ENST00000221954	human	ensembl	74_37	-1	known	silent	c.507	p.A169	0.001	NULL	pfam_Ig_V-set,pfscan_Ig-like_dom	-	no_errors	CEACAM4	HGNC	ENSG00000105352				54	0	0	36	14	28
RABAC1	0	genome.wustl.edu	37	19	42462889	42462889	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	42462889	42462889	C	T	SNP	RABAC1	ENST00000222008	human	ensembl	74_37	-1	known	missense	c.268	p.V90M	1.000	pfam_Prenylated_rab_accept_PRA1	pfam_Prenylated_rab_accept_PRA1	-	no_errors	RABAC1	HGNC	ENSG00000105404				13	0	0	16	3	15.7895
ERF	0	genome.wustl.edu	37	19	42752808	42752808	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	42752808	42752808	G	A	SNP	ERF	ENST00000222329	human	ensembl	74_37	-1	known	missense	c.1456	p.R486W	1.000	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ERF	HGNC	ENSG00000105722				86	0	0	77	18	18.9474
ERF	0	genome.wustl.edu	37	19	42752834	42752834	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	42752834	42752834	C	T	SNP	ERF	ENST00000222329	human	ensembl	74_37	-1	known	missense	c.1430	p.C477Y	1.000	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ERF	HGNC	ENSG00000105722				94	0	0	92	17	15.5963
MEGF8	0	genome.wustl.edu	37	19	42848707	42848707	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	42848707	42848707	G	A	SNP	MEGF8	ENST00000251268	human	ensembl	74_37	+1	known	missense	c.1903	p.V635M	1.000	NULL	pfam_CUB_dom,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_CUB_dom,smart_EG-like_dom,smart_Plexin-like_fold,smart_EGF-like_Ca-bd_dom,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429				32	0	0	20	14	41.1765
LIPE	0	genome.wustl.edu	37	19	42914843	42914843	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	42914843	42914843	C	T	SNP	LIPE	ENST00000244289	human	ensembl	74_37	-1	known	silent	c.1035	p.A345	0.273	pfam_HSL_N	pfam_HSL_N,pfam_AB_hydrolase_3,pfam_Steryl_acetyl_hydrolase	-	no_errors	LIPE	HGNC	ENSG00000079435				29	0	0	20	8	28.5714
PSG1	0	genome.wustl.edu	37	19	43372462	43372462	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	43372462	43372462	C	T	SNP	PSG1	ENST00000312439	human	ensembl	74_37	-1	known	missense	c.1034	p.R345H	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG1	HGNC	ENSG00000231924				185	0	0	123	31	20.1299
SH3GL1	0	genome.wustl.edu	37	19	4361746	4361746	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	4361746	4361746	C	T	SNP	SH3GL1	ENST00000269886	human	ensembl	74_37	-1	known	missense	c.958	p.E320K	0.999	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox	pfam_BAR_dom,pfam_SH3_domain,pfam_BAR_dom-cont,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SH3GL1	HGNC	ENSG00000141985				52	0	0	50	18	26.4706
SH3GL1	0	genome.wustl.edu	37	19	4361778	4361778	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	4361778	4361778	G	A	SNP	SH3GL1	ENST00000269886	human	ensembl	74_37	-1	known	missense	c.926	p.P309L	0.999	superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_BAR_dom,pfam_SH3_domain,pfam_BAR_dom-cont,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SH3GL1	HGNC	ENSG00000141985				36	0	0	40	4	9.09091
IRGC	0	genome.wustl.edu	37	19	44223764	44223764	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	44223764	44223764	G	A	SNP	IRGC	ENST00000244314	human	ensembl	74_37	+1	known	missense	c.1054	p.D352N	0.115	NULL	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	-	no_errors	IRGC	HGNC	ENSG00000124449				38	0	0	39	16	29.0909
CHAF1A	0	genome.wustl.edu	37	19	4428859	4428859	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	4428859	4428859	T	C	SNP	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	missense	c.1576	p.S526P	0.000	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670				65	0	0	55	16	22.5352
PLIN4	0	genome.wustl.edu	37	19	4511362	4511362	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	4511362	4511362	G	A	SNP	PLIN4	ENST00000301286	human	ensembl	74_37	-1	novel	silent	c.2568	p.T856	0.000	NULL	pfam_Perilipin,superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PLIN4	HGNC	ENSG00000167676				182	0	0	151	34	18.3784
PVR	0	genome.wustl.edu	37	19	45162145	45162145	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	45162145	45162145	G	T	SNP	PVR	ENST00000425690	human	ensembl	74_37	+1	known	missense	c.1127	p.W376L	0.002	NULL	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVR	HGNC	ENSG00000073008				223	0	0	208	31	12.9707
BCAM	0	genome.wustl.edu	37	19	45322873	45322873	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	45322873	45322873	C	T	SNP	BCAM	ENST00000270233	human	ensembl	74_37	+1	known	silent	c.1653	p.V551	0.999	NULL	pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BCAM	HGNC	ENSG00000187244				40	0	0	24	10	29.4118
ZNF114	0	genome.wustl.edu	37	19	48789060	48789060	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	48789060	48789060	C	T	SNP	ZNF114	ENST00000315849	human	ensembl	74_37	+1	known	missense	c.179	p.P60L	0.001	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF114	HGNC	ENSG00000178150				223	1	0.446429	140	44	23.913
IZUMO1	0	genome.wustl.edu	37	19	49245072	49245072	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	49245072	49245072	G	A	SNP	IZUMO1	ENST00000332955	human	ensembl	74_37	-1	known	missense	c.728	p.A243V	0.998	NULL	NULL	-	no_errors	IZUMO1	HGNC	ENSG00000182264				81	0	0	65	4	5.7971
SNRNP70	0	genome.wustl.edu	37	19	49601926	49601926	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	49601926	49601926	C	T	SNP	SNRNP70	ENST00000598441	human	ensembl	74_37	+1	known	missense	c.358	p.R120W	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_U1snRNP70_N,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SNRNP70	HGNC	ENSG00000104852				211	0	0	169	34	16.7488
SNORD34	0	genome.wustl.edu	37	19	49994179	49994179	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	49994179	49994179	G	A	SNP	SNORD34	ENST00000365633	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD34	HGNC	ENSG00000202503				103	0	0	99	19	16.1017
IL4I1	0	genome.wustl.edu	37	19	50399296	50399296	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	50399296	50399296	C	T	SNP	IL4I1	ENST00000341114	human	ensembl	74_37	-1	known	missense	c.94	p.V32I	0.020	NULL	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_CHP00275_HI0933-like,pfam_FAD_bind_dom,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_AlaDH/PNT_NAD(H)-bd,pfam_mOase_FAD-bd,prints_Flavin_amine_oxidase	-	no_errors	IL4I1	HGNC	ENSG00000104951				45	0	0	38	9	19.1489
NUP62	0	genome.wustl.edu	37	19	50412020	50412020	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	50412020	50412020	G	A	SNP	NUP62	ENST00000352066	human	ensembl	74_37	-1	known	missense	c.1045	p.R349W	1.000	pfam_Nucleoporin_NSP1_C	pfam_Nucleoporin_NSP1_C	-	no_errors	NUP62	HGNC	ENSG00000213024				189	0	0	232	14	5.69106
KDM4B	0	genome.wustl.edu	37	19	5047640	5047640	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	5047640	5047640	T	C	SNP	KDM4B	ENST00000159111	human	ensembl	74_37	+1	known	missense	c.586	p.Y196H	1.000	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4B	HGNC	ENSG00000127663				108	0	0	86	13	13.1313
MYH14	0	genome.wustl.edu	37	19	50735186	50735186	+	Splice_Site	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	50735186	50735186	G	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	splice_site	c.974-1	e9-1	1.000	-	-	-	no_errors	MYH14	HGNC	ENSG00000105357				45	0	0	41	8	16.3265
MYBPC2	0	genome.wustl.edu	37	19	50951604	50951604	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	50951604	50951604	G	A	SNP	MYBPC2	ENST00000357701	human	ensembl	74_37	+1	known	missense	c.1429	p.E477K	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC2	HGNC	ENSG00000086967				188	0	0	147	35	19.2308
LRRC4B	0	genome.wustl.edu	37	19	51021132	51021132	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	51021132	51021132	C	T	SNP	LRRC4B	ENST00000389201	human	ensembl	74_37	-1	known	missense	c.1838	p.R613H	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4B	HGNC	ENSG00000131409				42	0	0	29	7	19.4444
KDM4B	0	genome.wustl.edu	37	19	5111407	5111407	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	5111407	5111407	G	A	SNP	KDM4B	ENST00000381759	human	ensembl	74_37	+1	known	silent	c.1137	p.P379	0.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,smart_TF_JmjN,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4B	HGNC	ENSG00000127663				74	0	0	60	11	15.493
KLK13	0	genome.wustl.edu	37	19	51561877	51561877	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	51561877	51561877	T	C	SNP	KLK13	ENST00000595793	human	ensembl	74_37	-1	known	missense	c.563	p.E188G	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK13	HGNC	ENSG00000167759				310	0	0	270	78	22.4138
FPR2	0	genome.wustl.edu	37	19	52272775	52272775	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	52272775	52272775	C	T	SNP	FPR2	ENST00000340023	human	ensembl	74_37	+1	known	silent	c.864	p.S288	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt,prints_DEZorph_rcpt	-	no_errors	FPR2	HGNC	ENSG00000171049				119	0	0	115	15	11.5385
ZNF616	0	genome.wustl.edu	37	19	52619216	52619216	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	52619216	52619216	G	A	SNP	ZNF616	ENST00000600228	human	ensembl	74_37	-1	known	nonsense	c.1201	p.R401*	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF616	HGNC	ENSG00000204611				373	0	0	336	68	16.8317
ZNF808	0	genome.wustl.edu	37	19	53050886	53050886	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	53050886	53050886	C	T	SNP	ZNF808	ENST00000359798	human	ensembl	74_37	+1	known	missense	c.185	p.A62V	0.005	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF808	HGNC	ENSG00000198482				273	0	0	211	58	21.5613
ZNF600	0	genome.wustl.edu	37	19	53269926	53269926	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	53269926	53269926	A	G	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	silent	c.1083	p.N361	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190				336	0	0	273	69	20.1754
ZNF320	0	genome.wustl.edu	37	19	53385079	53385079	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	53385079	53385079	C	T	SNP	ZNF320	ENST00000391781	human	ensembl	74_37	-1	known	silent	c.300	p.Q100	0.024	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF320	HGNC	ENSG00000182986				400	0	0	296	80	21.2766
ZNF765	0	genome.wustl.edu	37	19	53911017	53911017	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	53911017	53911017	A	G	SNP	ZNF765	ENST00000396408	human	ensembl	74_37	+1	known	missense	c.209	p.H70R	0.012	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF765	HGNC	ENSG00000196417				119	0	0	97	16	14.1593
SAFB2	0	genome.wustl.edu	37	19	5587937	5587937	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	5587937	5587937	G	A	SNP	SAFB2	ENST00000252542	human	ensembl	74_37	-1	known	silent	c.2580	p.R860	0.000	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254				19	0	0	18	5	21.7391
SBK2	0	genome.wustl.edu	37	19	56042650	56042650	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	56042650	56042650	C	T	SNP	SBK2	ENST00000344158	human	ensembl	74_37	-1	known	missense	c.316	p.E106K	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SBK2	HGNC	ENSG00000187550				26	0	0	23	5	17.8571
ZNF71	0	genome.wustl.edu	37	19	57133126	57133126	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	57133126	57133126	G	A	SNP	ZNF71	ENST00000328070	human	ensembl	74_37	+1	known	silent	c.471	p.P157	0.692	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF71	HGNC	ENSG00000197951				87	0	0	82	23	21.9048
ZSCAN4	0	genome.wustl.edu	37	19	58189820	58189820	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	58189820	58189820	T	C	SNP	ZSCAN4	ENST00000318203	human	ensembl	74_37	+1	known	silent	c.849	p.P283	0.663	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN4	HGNC	ENSG00000180532				185	0	0	164	13	7.34463
ZNF497	0	genome.wustl.edu	37	19	58867595	58867595	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	58867595	58867595	G	A	SNP	ZNF497	ENST00000311044	human	ensembl	74_37	-1	known	silent	c.1407	p.P469	0.092	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF497	HGNC	ENSG00000174586				22	0	0	8	2	20
RPS5	0	genome.wustl.edu	37	19	58904820	58904820	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	58904820	58904820	C	T	SNP	RPS5	ENST00000196551	human	ensembl	74_37	+1	known	missense	c.413	p.A138V	1.000	pfam_Ribosomal_S7_dom,superfamily_Ribosomal_S7_dom,tigrfam_Ribosomal_S5/S7_euk/arc	pfam_Ribosomal_S7_dom,superfamily_Ribosomal_S7_dom,tigrfam_Ribosomal_S5/S7_euk/arc	-	no_errors	RPS5	HGNC	ENSG00000083845				103	0	0	91	20	18.018
ZNF324	0	genome.wustl.edu	37	19	58980635	58980635	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	58980635	58980635	G	A	SNP	ZNF324	ENST00000196482	human	ensembl	74_37	+1	known	missense	c.83	p.R28H	0.496	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324	HGNC	ENSG00000083812				58	0	0	54	10	15.625
MZF1	0	genome.wustl.edu	37	19	59082545	59082545	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	59082545	59082545	T	C	SNP	MZF1	ENST00000215057	human	ensembl	74_37	-1	known	missense	c.212	p.Q71R	0.981	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	MZF1	HGNC	ENSG00000099326				30	0	0	26	4	13.3333
FGF22	0	genome.wustl.edu	37	19	643535	643535	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	643535	643535	G	C	SNP	FGF22	ENST00000586042	human	ensembl	74_37	+1	putative	missense	c.421	p.A141P	0.024	smart_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam	-	no_errors	FGF22	HGNC	ENSG00000070388				15	0	0	9	2	18.1818
DENND1C	0	genome.wustl.edu	37	19	6475354	6475354	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	6475354	6475354	C	T	SNP	DENND1C	ENST00000381480	human	ensembl	74_37	-1	known	silent	c.984	p.V328	1.000	pfam_dDENN_dom,smart_dDENN_dom,pfscan_dDENN_dom	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1C	HGNC	ENSG00000205744				33	0	0	26	4	13.3333
C3	0	genome.wustl.edu	37	19	6678248	6678248	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	6678248	6678248	T	C	SNP	C3	ENST00000245907	human	ensembl	74_37	-1	known	missense	c.4765	p.K1589E	0.994	pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,smart_Netrin_module_non-TIMP,pfscan_Netrin_domain	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730				72	0	0	69	19	21.5909
C3	0	genome.wustl.edu	37	19	6690640	6690640	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	6690640	6690640	G	A	SNP	C3	ENST00000245907	human	ensembl	74_37	-1	known	silent	c.3489	p.N1163	0.293	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730				88	0	0	85	11	11.4583
FSTL3	0	genome.wustl.edu	37	19	681536	681536	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	681536	681536	G	A	SNP	FSTL3	ENST00000166139	human	ensembl	74_37	+1	known	missense	c.709	p.V237M	1.000	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,pfam_Follistatin/Osteonectin_EGF,superfamily_TB_dom,smart_Fol_N,smart_Kazal_dom	-	no_errors	FSTL3	HGNC	ENSG00000070404				20	0	0	14	5	26.3158
MUC16	0	genome.wustl.edu	37	19	9049967	9049967	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	9049967	9049967	C	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.31664	p.R10555M	0.018	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				321	0	0	289	17	5.55556
MUC16	0	genome.wustl.edu	37	19	9083647	9083647	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	9083647	9083647	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.8168	p.H2723R	0.097	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				192	0	0	139	41	22.7778
TAF1B	0	genome.wustl.edu	37	2	10045054	10045054	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	10045054	10045054	C	T	SNP	TAF1B	ENST00000263663	human	ensembl	74_37	+1	known	missense	c.874	p.R292C	0.995	NULL	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750				155	0	0	108	38	26.0274
RANBP2	0	genome.wustl.edu	37	2	109382947	109382947	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	109382947	109382947	T	C	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	silent	c.5952	p.G1984	0.000	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				656	0	0	607	49	7.46951
PQLC3	0	genome.wustl.edu	37	2	11317996	11317996	+	RNA	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	11317996	11317996	A	G	SNP	PQLC3	ENST00000487471	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PQLC3	HGNC	ENSG00000162976				72	0	0	65	11	14.4737
PSD4	0	genome.wustl.edu	37	2	113940003	113940003	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	113940003	113940003	G	A	SNP	PSD4	ENST00000465917	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PSD4	HGNC	ENSG00000125637				43	0	0	63	9	12.5
SCTR	0	genome.wustl.edu	37	2	120231031	120231031	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	120231031	120231031	G	A	SNP	SCTR	ENST00000019103	human	ensembl	74_37	-1	known	missense	c.403	p.R135W	0.910	prints_GPCR_2_secretin_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_secretin_rcpt,prints_GPCR_2_VIP_rcpt_1	-	no_errors	SCTR	HGNC	ENSG00000080293				83	0	0	63	18	22.2222
SCTR	0	genome.wustl.edu	37	2	120236486	120236486	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	120236486	120236486	C	A	SNP	SCTR	ENST00000019103	human	ensembl	74_37	-1	known	missense	c.202	p.G68W	0.011	pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_secretin_rcpt,prints_GPCR_2_VIP_rcpt_1	-	no_errors	SCTR	HGNC	ENSG00000080293				78	0	0	70	7	9.09091
TMEM177	0	genome.wustl.edu	37	2	120439310	120439310	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	120439310	120439310	G	A	SNP	TMEM177	ENST00000272521	human	ensembl	74_37	+1	known	missense	c.881	p.R294H	1.000	NULL	NULL	-	no_errors	TMEM177	HGNC	ENSG00000144120				148	0	0	140	11	7.28477
MBD5	0	genome.wustl.edu	37	2	149240765	149240765	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	149240765	149240765	G	A	SNP	MBD5	ENST00000407073	human	ensembl	74_37	+1	known	missense	c.2605	p.V869I	1.000	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_PWWP_dom	-	no_errors	MBD5	HGNC	ENSG00000204406				177	0	0	135	41	23.2955
NEB	0	genome.wustl.edu	37	2	152544188	152544188	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	152544188	152544188	G	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	silent	c.2475	p.D825	0.327	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				21	0	0	31	3	8.82353
GALNT13	0	genome.wustl.edu	37	2	155102337	155102337	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	155102337	155102337	C	T	SNP	GALNT13	ENST00000409237	human	ensembl	74_37	+1	known	silent	c.699	p.V233	0.999	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT13	HGNC	ENSG00000144278				251	1	0.396825	162	32	16.4948
ACVR1C	0	genome.wustl.edu	37	2	158390497	158390497	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	158390497	158390497	C	T	SNP	ACVR1C	ENST00000243349	human	ensembl	74_37	-1	known	missense	c.1415	p.R472H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ACVR1C	HGNC	ENSG00000123612				151	0	0	120	37	23.5669
BAZ2B	0	genome.wustl.edu	37	2	160295638	160295638	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	160295638	160295638	C	T	SNP	BAZ2B	ENST00000392783	human	ensembl	74_37	-1	known	missense	c.782	p.S261N	1.000	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2B	HGNC	ENSG00000123636				393	0	0	344	28	7.52688
LY75	0	genome.wustl.edu	37	2	160755441	160755441	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	160755441	160755441	A	G	SNP	LY75	ENST00000554112	human	ensembl	74_37	-1	known	missense	c.224	p.L75P	1.000	superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	LY75	HGNC	ENSG00000054219				181	1	0.549451	154	33	17.6471
GCA	0	genome.wustl.edu	37	2	163215634	163215634	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	163215634	163215634	G	T	SNP	GCA	ENST00000437150	human	ensembl	74_37	+1	known	missense	c.535	p.V179F	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	GCA	HGNC	ENSG00000115271				241	0	0	190	43	18.4549
COBLL1	0	genome.wustl.edu	37	2	165551064	165551064	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	165551064	165551064	G	T	SNP	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	silent	c.3153	p.A1051	0.106	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438				92	0	0	89	15	14.4231
SCN3A	0	genome.wustl.edu	37	2	165986605	165986605	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	165986605	165986605	G	A	SNP	SCN3A	ENST00000283254	human	ensembl	74_37	-1	known	missense	c.2767	p.R923W	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN3A	HGNC	ENSG00000153253				319	0	0	285	24	7.76699
XIRP2	0	genome.wustl.edu	37	2	168106895	168106895	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	168106895	168106895	A	G	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.8993	p.H2998R	0.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092				209	0	0	182	34	15.7407
LRP2	0	genome.wustl.edu	37	2	170101368	170101368	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	170101368	170101368	G	A	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.3265	p.R1089C	0.002	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				268	1	0.371747	240	40	14.2857
DYNC1I2	0	genome.wustl.edu	37	2	172583353	172583353	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	172583353	172583353	A	C	SNP	DYNC1I2	ENST00000397119	human	ensembl	74_37	+1	known	missense	c.923	p.E308A	1.000	superfamily_WD40_repeat_dom	pfam_Dynein_IC_1/2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DYNC1I2	HGNC	ENSG00000077380				114	0	0	89	22	19.8198
CHN1	0	genome.wustl.edu	37	2	175664964	175664964	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	175664964	175664964	G	A	SNP	CHN1	ENST00000409900	human	ensembl	74_37	-1	known	silent	c.1260	p.I420	0.673	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pirsf_N-chimaerin,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SH2,superfamily_Rho_GTPase_activation_prot,smart_SH2,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pirsf_N-chimaerin,pfscan_SH2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_DAG/PE-bd	-	no_errors	CHN1	HGNC	ENSG00000128656				148	0	0	130	9	6.47482
RAD51AP2	0	genome.wustl.edu	37	2	17696566	17696566	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	17696566	17696566	A	G	SNP	RAD51AP2	ENST00000399080	human	ensembl	74_37	-1	known	silent	c.3117	p.N1039	0.000	NULL	NULL	-	no_errors	RAD51AP2	HGNC	ENSG00000214842				171	0	0	153	9	5.55556
TTN	0	genome.wustl.edu	37	2	179428524	179428524	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179428524	179428524	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.74631	p.M24877I	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				199	0	0	164	35	17.5879
TTN	0	genome.wustl.edu	37	2	179434204	179434204	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179434204	179434204	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.68951	p.R22984Q	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				78	0	0	87	7	7.44681
TTN	0	genome.wustl.edu	37	2	179460530	179460530	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179460530	179460530	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.49847	p.P16616L	1.000	superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				19	0	0	9	3	25
TTN	0	genome.wustl.edu	37	2	179472135	179472135	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179472135	179472135	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.45576	p.E15192D	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				276	0	0	213	63	22.8261
TTN	0	genome.wustl.edu	37	2	179552924	179552924	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179552924	179552924	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.28493	p.S9498L	0.573	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				253	0	0	182	38	17.2727
TTN	0	genome.wustl.edu	37	2	179605532	179605532	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179605532	179605532	A	G	SNP	TTN	ENST00000342175	human	ensembl	74_37	-1	known	missense	c.11915	p.L3972P	0.000	superfamily_RNaseH-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				301	0	0	270	21	7.21649
GEN1	0	genome.wustl.edu	37	2	17963171	17963171	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	17963171	17963171	C	T	SNP	GEN1	ENST00000317402	human	ensembl	74_37	+1	known	missense	c.2692	p.R898C	0.807	NULL	pfam_XPG-I_dom,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	GEN1	HGNC	ENSG00000178295				144	0	0	124	28	18.4211
MSGN1	0	genome.wustl.edu	37	2	17997959	17997959	+	Silent	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	17997959	17997959	T	G	SNP	MSGN1	ENST00000281047	human	ensembl	74_37	+1	known	silent	c.174	p.S58	0.593	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MSGN1	HGNC	ENSG00000151379				132	0	0	110	26	19.1176
SESTD1	0	genome.wustl.edu	37	2	179986571	179986571	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179986571	179986571	A	T	SNP	SESTD1	ENST00000428443	human	ensembl	74_37	-1	known	missense	c.1368	p.D456E	1.000	NULL	superfamily_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	SESTD1	HGNC	ENSG00000187231				159	0	0	122	39	24.2236
SSFA2	0	genome.wustl.edu	37	2	182786912	182786912	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	182786912	182786912	C	T	SNP	SSFA2	ENST00000431877	human	ensembl	74_37	+1	known	nonsense	c.3448	p.R1150*	1.000	NULL	NULL	-	no_errors	SSFA2	HGNC	ENSG00000138434				201	1	0.49505	184	11	5.64103
PPP1R1C	0	genome.wustl.edu	37	2	182852584	182852584	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	182852584	182852584	A	G	SNP	PPP1R1C	ENST00000409137	human	ensembl	74_37	+1	known	missense	c.100	p.T34A	0.998	pfam_PPI_1DARPP-32	pfam_PPI_1DARPP-32	-	no_errors	PPP1R1C	HGNC	ENSG00000150722				289	0	0	256	35	12.0275
NCKAP1	0	genome.wustl.edu	37	2	183822241	183822241	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	183822241	183822241	A	G	SNP	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	silent	c.1983	p.P661	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1	-	no_errors	NCKAP1	HGNC	ENSG00000061676				243	0	0	184	62	25.2033
NT5C1B	0	genome.wustl.edu	37	2	18765855	18765855	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	18765855	18765855	G	A	SNP	NT5C1B	ENST00000406971	human	ensembl	74_37	-1	known	missense	c.581	p.T194M	0.000	NULL	NULL	-	no_errors	NT5C1B	HGNC	ENSG00000185013				21	0	0	8	4	33.3333
ANKRD44	0	genome.wustl.edu	37	2	197878289	197878289	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	197878289	197878289	C	T	SNP	ANKRD44	ENST00000328737	human	ensembl	74_37	-1	known	missense	c.1795	p.A599T	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD44	HGNC	ENSG00000065413				379	0	0	275	61	18.1548
TRAK2	0	genome.wustl.edu	37	2	202272204	202272204	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	202272204	202272204	T	C	SNP	TRAK2	ENST00000332624	human	ensembl	74_37	-1	known	missense	c.208	p.T70A	1.000	pfam_HAP1_N	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK2	HGNC	ENSG00000115993				103	1	0.961538	102	12	10.5263
ALS2CR11	0	genome.wustl.edu	37	2	202352372	202352372	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	202352372	202352372	T	A	SNP	ALS2CR11	ENST00000286195	human	ensembl	74_37	-1	known	missense	c.1835	p.H612L	0.000	NULL	superfamily_C2_dom	-	no_errors	ALS2CR11	HGNC	ENSG00000155754				302	0	0	226	61	21.2544
BMPR2	0	genome.wustl.edu	37	2	203384875	203384875	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	203384875	203384875	T	G	SNP	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	missense	c.918	p.H306Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217				91	0	0	68	7	9.33333
NBEAL1	0	genome.wustl.edu	37	2	204045236	204045236	+	Splice_Site	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	204045236	204045236	G	A	SNP	NBEAL1	ENST00000449802	human	ensembl	74_37	+1	known	splice_site	c.6508+1	e41+1	1.000	-	-	-	no_errors	NBEAL1	HGNC	ENSG00000144426				76	0	0	53	15	22.0588
NBEAL1	0	genome.wustl.edu	37	2	204075771	204075771	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	204075771	204075771	G	A	SNP	NBEAL1	ENST00000449802	human	ensembl	74_37	+1	known	missense	c.7789	p.G2597R	1.000	superfamily_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL1	HGNC	ENSG00000144426				137	0	0	101	28	21.7054
ABCA12	0	genome.wustl.edu	37	2	215823039	215823039	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	215823039	215823039	C	T	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	missense	c.6079	p.V2027M	0.997	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452				231	0	0	209	52	19.9234
FN1	0	genome.wustl.edu	37	2	216226782	216226782	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	216226782	216226782	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	silent	c.7272	p.C2424	1.000	smart_Fibronectin_type1,pfscan_Fibronectin_type1	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				60	0	0	56	12	17.6471
FN1	0	genome.wustl.edu	37	2	216229623	216229623	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	216229623	216229623	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	silent	c.7230	p.C2410	1.000	pfam_Fibronectin_type1,smart_Fibronectin_type1,pfscan_Fibronectin_type1	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				9	0	0	7	3	30
FN1	0	genome.wustl.edu	37	2	216248175	216248175	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	216248175	216248175	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	silent	c.4926	p.T1642	0.668	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				210	0	0	150	49	24.6231
FN1	0	genome.wustl.edu	37	2	216262429	216262429	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	216262429	216262429	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.3491	p.A1164V	0.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				257	1	0.387597	211	40	15.9363
SMARCAL1	0	genome.wustl.edu	37	2	217285159	217285159	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	217285159	217285159	C	T	SNP	SMARCAL1	ENST00000357276	human	ensembl	74_37	+1	known	nonsense	c.1000	p.R334*	0.198	NULL	pfam_HARP_dom,pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAL1	HGNC	ENSG00000138375				126	0	0	103	10	8.84956
TNS1	0	genome.wustl.edu	37	2	218713378	218713378	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	218713378	218713378	C	T	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	missense	c.1487	p.R496Q	1.000	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				138	0	0	108	21	16.2791
TUBA4B	0	genome.wustl.edu	37	2	220136455	220136455	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	220136455	220136455	G	A	SNP	TUBA4B	ENST00000473885	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TUBA4B	HGNC	ENSG00000243910				104	0	0	78	22	22
PAX3	0	genome.wustl.edu	37	2	223159014	223159014	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	223159014	223159014	G	T	SNP	PAX3	ENST00000392069	human	ensembl	74_37	-1	known	missense	c.458	p.S153Y	1.000	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom	pfam_Paired_dom,pfam_Pax7,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX3	HGNC	ENSG00000135903				75	0	0	61	12	16.4384
FARSB	0	genome.wustl.edu	37	2	223505594	223505594	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	223505594	223505594	A	C	SNP	FARSB	ENST00000281828	human	ensembl	74_37	-1	known	missense	c.326	p.I109S	0.996	tigrfam_Phe-tRNA-synth_IIc_bsu_arc	pfam_B3/B4_tRNA-bd,pfam_tRNA_synthase_B5-dom,superfamily_DNA-bd_dom_put,superfamily_Phe-tRNA_synthase_B3/B4,smart_B3/B4_tRNA-bd,smart_tRNA_synthase_B5-dom,tigrfam_Phe-tRNA-synth_IIc_bsu_arc	-	no_errors	FARSB	HGNC	ENSG00000116120				62	0	0	43	11	20.3704
SCG2	0	genome.wustl.edu	37	2	224463172	224463172	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	224463172	224463172	G	C	SNP	SCG2	ENST00000305409	human	ensembl	74_37	-1	known	missense	c.829	p.Q277E	0.999	pfam_Granin	pfam_Granin	-	no_errors	SCG2	HGNC	ENSG00000171951				531	0	0	436	32	6.83761
FAM124B	0	genome.wustl.edu	37	2	225265913	225265913	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	225265913	225265913	C	T	SNP	FAM124B	ENST00000409685	human	ensembl	74_37	-1	known	silent	c.573	p.L191	1.000	NULL	NULL	-	no_errors	FAM124B	HGNC	ENSG00000124019				92	0	0	87	13	13
COL4A3	0	genome.wustl.edu	37	2	228153918	228153918	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	228153918	228153918	A	G	SNP	COL4A3	ENST00000396578	human	ensembl	74_37	+1	known	silent	c.2934	p.P978	1.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031				36	0	0	26	6	18.75
MFF	0	genome.wustl.edu	37	2	228211948	228211948	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	228211948	228211948	A	G	SNP	MFF	ENST00000353339	human	ensembl	74_37	+1	known	silent	c.600	p.T200	1.000	pfam_FATE/Miff/Tango-11	pfam_FATE/Miff/Tango-11	-	no_errors	MFF	HGNC	ENSG00000168958				207	0	0	166	45	21.327
TM4SF20	0	genome.wustl.edu	37	2	228228629	228228629	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	228228629	228228629	C	T	SNP	TM4SF20	ENST00000304568	human	ensembl	74_37	-1	known	silent	c.501	p.A167	0.000	pfam_L6_membrane	pfam_L6_membrane	-	no_errors	TM4SF20	HGNC	ENSG00000168955				232	0	0	168	47	21.8605
PID1	0	genome.wustl.edu	37	2	229890462	229890462	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	229890462	229890462	G	A	SNP	PID1	ENST00000354069	human	ensembl	74_37	-1	known	silent	c.639	p.H213	0.871	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	PID1	HGNC	ENSG00000153823				156	0	0	134	36	21.1765
PID1	0	genome.wustl.edu	37	2	230020592	230020592	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	230020592	230020592	G	A	SNP	PID1	ENST00000354069	human	ensembl	74_37	-1	known	missense	c.218	p.A73V	1.000	NULL	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	PID1	HGNC	ENSG00000153823				173	0	0	146	35	19.337
SP100	0	genome.wustl.edu	37	2	231313824	231313824	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	231313824	231313824	G	A	SNP	SP100	ENST00000340126	human	ensembl	74_37	+1	known	missense	c.545	p.R182Q	0.000	NULL	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP100	HGNC	ENSG00000067066				211	0	0	169	33	16.3366
B3GNT7	0	genome.wustl.edu	37	2	232263030	232263030	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	232263030	232263030	C	T	SNP	B3GNT7	ENST00000287590	human	ensembl	74_37	+1	known	silent	c.600	p.Y200	0.982	pfam_Glyco_trans_31	pfam_Glyco_trans_31,pfam_Fringe-like	-	no_errors	B3GNT7	HGNC	ENSG00000156966				96	0	0	101	29	22.3077
LINC00471	0	genome.wustl.edu	37	2	232373716	232373716	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	232373716	232373716	G	A	SNP	LINC00471	ENST00000313064	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00471	HGNC	ENSG00000181798				100	0	0	89	25	21.9298
GBX2	0	genome.wustl.edu	37	2	237074908	237074908	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	237074908	237074908	C	T	SNP	GBX2	ENST00000306318	human	ensembl	74_37	-1	known	silent	c.696	p.P232	0.924	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	GBX2	HGNC	ENSG00000168505				56	0	0	61	18	22.7848
COL6A3	0	genome.wustl.edu	37	2	238253469	238253469	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	238253469	238253469	C	T	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.7192	p.V2398I	0.287	NULL	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				179	0	0	150	25	14.2857
COL6A3	0	genome.wustl.edu	37	2	238277420	238277420	+	Silent	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	238277420	238277420	C	A	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	silent	c.4686	p.V1562	0.854	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				290	0	0	223	66	22.8374
PER2	0	genome.wustl.edu	37	2	239167156	239167156	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	239167156	239167156	C	A	SNP	PER2	ENST00000254657	human	ensembl	74_37	-1	known	missense	c.1757	p.C586F	1.000	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER2	HGNC	ENSG00000132326				81	0	0	45	11	19.6429
ENSG00000235351	0	genome.wustl.edu	37	2	242664463	242664463	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	242664463	242664463	G	A	SNP	ENSG00000235351	ENST00000435195	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC114730.11	Clone_based_vega_gene	ENSG00000235351				45	0	0	41	7	14.5833
NCOA1	0	genome.wustl.edu	37	2	24929854	24929854	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	24929854	24929854	C	T	SNP	NCOA1	ENST00000348332	human	ensembl	74_37	+1	known	silent	c.1515	p.N505	1.000	pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA1	HGNC	ENSG00000084676				213	0	0	156	46	22.7723
NCOA1	0	genome.wustl.edu	37	2	24974860	24974860	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	24974860	24974860	C	T	SNP	NCOA1	ENST00000348332	human	ensembl	74_37	+1	known	missense	c.3716	p.P1239L	1.000	pfam_DUF1518,pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA1	HGNC	ENSG00000084676				147	0	0	87	22	20.1835
ASXL2	0	genome.wustl.edu	37	2	25964955	25964955	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	25964955	25964955	G	A	SNP	ASXL2	ENST00000435504	human	ensembl	74_37	-1	known	silent	c.4251	p.C1417	1.000	superfamily_Znf_FYVE_PHD	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL2	HGNC	ENSG00000143970				176	0	0	142	43	23.2432
SLC5A6	0	genome.wustl.edu	37	2	27423438	27423438	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	27423438	27423438	C	T	SNP	SLC5A6	ENST00000310574	human	ensembl	74_37	-1	known	missense	c.1774	p.D592N	0.007	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A6	HGNC	ENSG00000138074				64	0	0	46	11	19.2982
EIF2B4	0	genome.wustl.edu	37	2	27590038	27590038	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	27590038	27590038	G	A	SNP	EIF2B4	ENST00000347454	human	ensembl	74_37	-1	known	missense	c.916	p.R306W	0.032	pfam_IF-2B-related	pfam_IF-2B-related	-	no_errors	EIF2B4	HGNC	ENSG00000115211				229	1	0.434783	185	36	16.2896
FOSL2	0	genome.wustl.edu	37	2	28631709	28631709	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	28631709	28631709	G	T	SNP	FOSL2	ENST00000264716	human	ensembl	74_37	+1	known	silent	c.438	p.R146	1.000	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	FOSL2	HGNC	ENSG00000075426				34	0	0	20	6	23.0769
TSSC1	0	genome.wustl.edu	37	2	3261132	3261132	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	3261132	3261132	G	A	SNP	TSSC1	ENST00000382125	human	ensembl	74_37	-1	known	silent	c.354	p.S118	1.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TSSC1	HGNC	ENSG00000032389				88	0	0	63	18	22.2222
BIRC6	0	genome.wustl.edu	37	2	32800338	32800338	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	32800338	32800338	T	C	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	silent	c.13260	p.G4420	0.672	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760				345	0	0	272	33	10.8197
VIT	0	genome.wustl.edu	37	2	37035765	37035765	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	37035765	37035765	G	A	SNP	VIT	ENST00000379242	human	ensembl	74_37	+1	known	missense	c.1540	p.V514I	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_LCCL,superfamily_LCCL,smart_LCCL,smart_VWF_A,pfscan_LCCL,pfscan_VWF_A	-	no_errors	VIT	HGNC	ENSG00000205221				69	0	0	68	5	6.84932
STRN	0	genome.wustl.edu	37	2	37129804	37129804	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	37129804	37129804	C	T	SNP	STRN	ENST00000263918	human	ensembl	74_37	-1	known	silent	c.582	p.T194	1.000	NULL	pfam_Striatin_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	STRN	HGNC	ENSG00000115808				348	0	0	290	46	13.6905
EIF2AK2	0	genome.wustl.edu	37	2	37334430	37334430	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	37334430	37334430	G	A	SNP	EIF2AK2	ENST00000233057	human	ensembl	74_37	-1	known	nonsense	c.1642	p.R548*	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_dsRNA-bd_dom,superfamily_Kinase-like_dom,smart_dsRNA-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_dsRNA-bd_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EIF2AK2	HGNC	ENSG00000055332				179	0	0	102	27	20.9302
CEBPZ	0	genome.wustl.edu	37	2	37454928	37454928	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	37454928	37454928	G	A	SNP	CEBPZ	ENST00000234170	human	ensembl	74_37	-1	known	missense	c.1408	p.R470W	1.000	superfamily_ARM-type_fold	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	CEBPZ	HGNC	ENSG00000115816				137	0	0	115	26	18.4397
SPTBN1	0	genome.wustl.edu	37	2	54877104	54877104	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	54877104	54877104	A	T	SNP	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	missense	c.5555	p.D1852V	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306				204	0	0	189	33	14.8649
WDPCP	0	genome.wustl.edu	37	2	63540407	63540407	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	63540407	63540407	G	A	SNP	WDPCP	ENST00000272321	human	ensembl	74_37	-1	known	silent	c.1788	p.D596	0.997	pfam_DUF3312	pfam_DUF3312,superfamily_WD40_repeat_dom	-	no_errors	WDPCP	HGNC	ENSG00000143951				70	0	0	46	8	14.8148
MDH1	0	genome.wustl.edu	37	2	63824675	63824675	+	Silent	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	63824675	63824675	A	C	SNP	MDH1	ENST00000539945	human	ensembl	74_37	+1	known	silent	c.396	p.A132	0.938	pfam_Lactate/malate_DH_N,pirsf_L-lactate/malate_DH,tigrfam_Malate_DH_NAD-dep_euk,tigrfam_Malate_DH_type2	pfam_Lactate/malate_DH_C,pfam_Lactate/malate_DH_N,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,tigrfam_Malate_DH_NAD-dep_euk,tigrfam_Malate_DH_type2	-	no_errors	MDH1	HGNC	ENSG00000014641				97	0	0	76	11	12.6437
ARHGAP25	0	genome.wustl.edu	37	2	69045039	69045039	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	69045039	69045039	A	G	SNP	ARHGAP25	ENST00000409202	human	ensembl	74_37	+1	known	missense	c.916	p.N306D	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP25	HGNC	ENSG00000163219				106	0	0	75	5	6.25
CYP26B1	0	genome.wustl.edu	37	2	72362528	72362528	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	72362528	72362528	G	A	SNP	CYP26B1	ENST00000001146	human	ensembl	74_37	-1	known	silent	c.450	p.S150	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP26B1	HGNC	ENSG00000003137				130	0	0	127	25	16.4474
EGR4	0	genome.wustl.edu	37	2	73518651	73518651	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	73518651	73518651	C	T	SNP	EGR4	ENST00000545030	human	ensembl	74_37	-1	known	silent	c.1704	p.A568	0.989	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR4	HGNC	ENSG00000135625				21	0	0	15	8	34.7826
C2orf78	0	genome.wustl.edu	37	2	74043913	74043913	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	74043913	74043913	C	T	SNP	C2orf78	ENST00000409561	human	ensembl	74_37	+1	novel	missense	c.2563	p.R855C	0.717	NULL	NULL	-	no_errors	C2orf78	HGNC	ENSG00000187833				89	0	0	94	17	15.3153
CTNNA2	0	genome.wustl.edu	37	2	80136908	80136908	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	80136908	80136908	C	T	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	silent	c.1143	p.S381	1.000	pfam_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				61	0	0	47	8	14.5455
SFTPB	0	genome.wustl.edu	37	2	85890587	85890587	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	85890587	85890587	C	T	SNP	SFTPB	ENST00000393822	human	ensembl	74_37	-1	known	missense	c.920	p.R307Q	0.044	superfamily_Saposin-like,pfscan_SaposinB	pfam_SapB_2,pfam_SapA,pfam_SapB_1,superfamily_Saposin-like,smart_SapA,smart_SaposinB,pfscan_SapA,pfscan_SaposinB,prints_Saposin	-	no_errors	SFTPB	HGNC	ENSG00000168878				30	0	0	31	9	22.5
SFTPB	0	genome.wustl.edu	37	2	85894899	85894899	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	85894899	85894899	G	C	SNP	SFTPB	ENST00000393822	human	ensembl	74_37	-1	known	missense	c.134	p.A45G	0.994	pfam_SapA,smart_SapA,pfscan_SapA,prints_Saposin	pfam_SapB_2,pfam_SapA,pfam_SapB_1,superfamily_Saposin-like,smart_SapA,smart_SaposinB,pfscan_SapA,pfscan_SaposinB,prints_Saposin	-	no_errors	SFTPB	HGNC	ENSG00000168878				99	0	0	87	26	23.0088
POLR1A	0	genome.wustl.edu	37	2	86292506	86292506	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	86292506	86292506	C	T	SNP	POLR1A	ENST00000263857	human	ensembl	74_37	-1	known	missense	c.1949	p.R650Q	1.000	pfam_RNA_pol_Rpb1_3	pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_Rpb1_1,smart_RNA_pol_N	-	no_errors	POLR1A	HGNC	ENSG00000068654				174	0	0	177	40	18.4332
ANKRD36BP2	0	genome.wustl.edu	37	2	89084303	89084303	+	RNA	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	89084303	89084303	T	C	SNP	ANKRD36BP2	ENST00000393515	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ANKRD36BP2	HGNC	ENSG00000230006				31	0	0	27	4	12.9032
ASAP2	0	genome.wustl.edu	37	2	9491025	9491025	+	Splice_Site	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	9491025	9491025	G	A	SNP	ASAP2	ENST00000281419	human	ensembl	74_37	+1	known	splice_site	c.1111+1	e12+1	1.000	-	-	-	no_errors	ASAP2	HGNC	ENSG00000151693				38	0	0	32	11	25.5814
TEKT4	0	genome.wustl.edu	37	2	95539788	95539788	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	95539788	95539788	C	T	SNP	TEKT4	ENST00000295201	human	ensembl	74_37	+1	known	silent	c.648	p.C216	0.997	pfam_Tektin	pfam_Tektin,prints_Tektin	-	no_errors	TEKT4	HGNC	ENSG00000163060				105	0	0	75	15	16.6667
SNRNP200	0	genome.wustl.edu	37	2	96944058	96944058	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	96944058	96944058	G	A	SNP	SNRNP200	ENST00000323853	human	ensembl	74_37	-1	known	nonsense	c.5527	p.R1843*	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SNRNP200	HGNC	ENSG00000144028				133	0	0	102	25	19.685
KANSL3	0	genome.wustl.edu	37	2	97261292	97261292	+	RNA	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	97261292	97261292	C	A	SNP	KANSL3	ENST00000481986	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	KANSL3	HGNC	ENSG00000114982				25	0	0	21	4	16
ANKRD23	0	genome.wustl.edu	37	2	97505471	97505471	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	97505471	97505471	C	T	SNP	ANKRD23	ENST00000318357	human	ensembl	74_37	-1	known	missense	c.815	p.R272Q	0.012	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD23	HGNC	ENSG00000163126				24	0	0	28	8	22.2222
JAG1	0	genome.wustl.edu	37	20	10625879	10625879	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	10625879	10625879	C	T	SNP	JAG1	ENST00000254958	human	ensembl	74_37	-1	known	silent	c.2139	p.T713	0.595	pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	JAG1	HGNC	ENSG00000101384				132	0	0	109	25	18.6567
JAG1	0	genome.wustl.edu	37	20	10628735	10628735	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	10628735	10628735	A	G	SNP	JAG1	ENST00000254958	human	ensembl	74_37	-1	known	silent	c.1593	p.P531	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	JAG1	HGNC	ENSG00000101384				73	0	0	67	10	12.987
DEFB126	0	genome.wustl.edu	37	20	126315	126315	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	126315	126315	C	T	SNP	DEFB126	ENST00000382398	human	ensembl	74_37	+1	known	silent	c.318	p.P106	0.002	NULL	NULL	-	no_errors	DEFB126	HGNC	ENSG00000125788				203	0	0	167	45	21.2264
SPTLC3	0	genome.wustl.edu	37	20	13098152	13098152	+	Splice_Site	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	13098152	13098152	G	A	SNP	SPTLC3	ENST00000399002	human	ensembl	74_37	+1	known	splice_site	c.933-1	e8-1	1.000	-	-	-	no_errors	SPTLC3	HGNC	ENSG00000172296				304	0	0	235	59	20.068
XRN2	0	genome.wustl.edu	37	20	21346276	21346276	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	21346276	21346276	C	G	SNP	XRN2	ENST00000377191	human	ensembl	74_37	+1	known	missense	c.2390	p.P797R	1.000	pirsf_5_3_exoribonuclease_2	pfam_Put_53exo,superfamily_Znf_CCHC,pirsf_5_3_exoribonuclease_2	-	no_errors	XRN2	HGNC	ENSG00000088930				129	0	0	115	30	20.6897
NAPB	0	genome.wustl.edu	37	20	23377795	23377795	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	23377795	23377795	T	C	SNP	NAPB	ENST00000377026	human	ensembl	74_37	-1	known	missense	c.209	p.K70R	1.000	NULL	prints_NSF_attach	-	no_errors	NAPB	HGNC	ENSG00000125814				114	0	0	98	21	17.6471
KIF3B	0	genome.wustl.edu	37	20	30897800	30897800	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	30897800	30897800	G	A	SNP	KIF3B	ENST00000375712	human	ensembl	74_37	+1	known	missense	c.220	p.D74N	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3B	HGNC	ENSG00000101350				165	0	0	159	33	17.1875
KIF3B	0	genome.wustl.edu	37	20	30898711	30898711	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	30898711	30898711	G	T	SNP	KIF3B	ENST00000375712	human	ensembl	74_37	+1	known	missense	c.1131	p.R377S	1.000	superfamily_P-loop_NTPase	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3B	HGNC	ENSG00000101350				67	0	0	43	17	28.3333
NCOA6	0	genome.wustl.edu	37	20	33337956	33337956	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	33337956	33337956	T	C	SNP	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	missense	c.2042	p.K681R	1.000	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646				132	0	0	101	28	21.7054
NCOA6	0	genome.wustl.edu	37	20	33345770	33345770	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	33345770	33345770	G	A	SNP	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	nonsense	c.781	p.Q261*	1.000	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646				38	0	0	49	8	14.0351
MYH7B	0	genome.wustl.edu	37	20	33584501	33584501	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	33584501	33584501	C	T	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	missense	c.3332	p.T1111M	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814				39	0	0	32	6	15.7895
SIGLEC1	0	genome.wustl.edu	37	20	3669851	3669851	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	3669851	3669851	C	T	SNP	SIGLEC1	ENST00000344754	human	ensembl	74_37	-1	known	missense	c.5021	p.S1674N	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC1	HGNC	ENSG00000088827				319	0	0	214	58	21.3235
FAM83D	0	genome.wustl.edu	37	20	37580194	37580194	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	37580194	37580194	G	A	SNP	FAM83D	ENST00000217429	human	ensembl	74_37	+1	known	silent	c.879	p.T293	1.000	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83D	HGNC	ENSG00000101447				110	0	0	84	6	6.66667
DHX35	0	genome.wustl.edu	37	20	37639048	37639048	+	Splice_Site	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	37639048	37639048	G	A	SNP	DHX35	ENST00000252011	human	ensembl	74_37	+1	known	splice_site	c.1347+1	e13+1	1.000	-	-	-	no_errors	DHX35	HGNC	ENSG00000101452				80	0	0	69	18	20.6897
DHX35	0	genome.wustl.edu	37	20	37650575	37650575	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	37650575	37650575	C	T	SNP	DHX35	ENST00000252011	human	ensembl	74_37	+1	known	silent	c.1590	p.H530	1.000	pfam_Helicase-assoc_dom,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX35	HGNC	ENSG00000101452				260	0	0	219	14	6.00858
MAVS	0	genome.wustl.edu	37	20	3846576	3846576	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	3846576	3846576	C	A	SNP	MAVS	ENST00000428216	human	ensembl	74_37	+1	known	missense	c.1405	p.H469N	0.029	NULL	NULL	-	no_errors	MAVS	HGNC	ENSG00000088888				78	0	0	80	19	19.1919
PTPRT	0	genome.wustl.edu	37	20	40944615	40944615	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	40944615	40944615	C	A	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.1887	p.K629N	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				111	0	0	111	10	8.26446
PIGT	0	genome.wustl.edu	37	20	44052984	44052984	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	44052984	44052984	G	A	SNP	PIGT	ENST00000279036	human	ensembl	74_37	+1	known	missense	c.1363	p.E455K	1.000	pfam_PIG-T	pfam_PIG-T	-	no_errors	PIGT	HGNC	ENSG00000124155				84	0	0	71	13	15.4762
ZSWIM3	0	genome.wustl.edu	37	20	44506069	44506069	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	44506069	44506069	G	A	SNP	ZSWIM3	ENST00000255152	human	ensembl	74_37	+1	known	missense	c.872	p.R291Q	0.518	pfam_MULE_transposase_dom,pfam_Transposase	pfam_Znf_SWIM,pfam_MULE_transposase_dom,pfam_Transposase,smart_Znf_PMZ,pfscan_Znf_SWIM	-	no_errors	ZSWIM3	HGNC	ENSG00000132801				140	0	0	89	36	28.8
MMP9	0	genome.wustl.edu	37	20	44640898	44640898	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	44640898	44640898	G	A	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	missense	c.1120	p.A374T	1.000	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985				149	0	0	136	24	15
EYA2	0	genome.wustl.edu	37	20	45811964	45811964	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	45811964	45811964	A	G	SNP	EYA2	ENST00000327619	human	ensembl	74_37	+1	known	missense	c.1461	p.I487M	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA2	HGNC	ENSG00000064655				160	0	0	140	14	9.09091
TMEM189-UBE2V1	0	genome.wustl.edu	37	20	48744537	48744537	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	48744537	48744537	G	A	SNP	TMEM189-UBE2V1	ENST00000341698	human	ensembl	74_37	-1	known	silent	c.666	p.H222	0.386	pfam_KuaUb-conj-enz_UEV1	pfam_KuaUb-conj-enz_UEV1,pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	TMEM189-UBE2V1	HGNC	ENSG00000124208				38	0	0	27	3	10
ZFP64	0	genome.wustl.edu	37	20	50701307	50701307	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	50701307	50701307	G	A	SNP	ZFP64	ENST00000361387	human	ensembl	74_37	-1	known	missense	c.1727	p.T576M	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP64	HGNC	ENSG00000020256				60	0	0	65	17	20.7317
GNAS	0	genome.wustl.edu	37	20	57415346	57415346	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	57415346	57415346	G	A	SNP	GNAS	ENST00000313949	human	ensembl	74_37	+1	known	missense	c.185	p.R62Q	1.000	pfam_NESP55	pfam_NESP55	-	no_errors	GNAS	HGNC	ENSG00000087460				95	0	0	84	13	13.4021
LRRN4	0	genome.wustl.edu	37	20	6021879	6021879	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	6021879	6021879	C	T	SNP	LRRN4	ENST00000378858	human	ensembl	74_37	-1	known	missense	c.2012	p.C671Y	0.961	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LRRN4	HGNC	ENSG00000125872				19	0	0	18	4	18.1818
TAF4	0	genome.wustl.edu	37	20	60589624	60589624	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	60589624	60589624	G	A	SNP	TAF4	ENST00000252996	human	ensembl	74_37	-1	known	silent	c.1500	p.P500	0.726	NULL	pfam_TAF4,pfam_TAFH_NHR1,superfamily_Histone-fold,smart_TAFH_NHR1,pfscan_TAFH_NHR1	-	no_errors	TAF4	HGNC	ENSG00000130699				41	0	0	18	8	30.7692
LAMA5	0	genome.wustl.edu	37	20	60921226	60921226	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	60921226	60921226	A	G	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.1328	p.L443P	1.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				32	0	0	35	5	12.5
COL9A3	0	genome.wustl.edu	37	20	61472005	61472005	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	61472005	61472005	C	T	SNP	COL9A3	ENST00000343916	human	ensembl	74_37	+1	known	missense	c.1976	p.P659L	0.997	pfam_Collagen	pfam_Collagen	-	no_errors	COL9A3	HGNC	ENSG00000092758				12	0	0	5	4	44.4444
BHLHE23	0	genome.wustl.edu	37	20	61637673	61637673	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	61637673	61637673	G	A	SNP	BHLHE23	ENST00000370346	human	ensembl	74_37	-1	known	missense	c.406	p.R136C	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	BHLHE23	HGNC	ENSG00000125533				31	0	0	22	12	35.2941
CHRNA4	0	genome.wustl.edu	37	20	61981656	61981656	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	61981656	61981656	C	T	SNP	CHRNA4	ENST00000370263	human	ensembl	74_37	-1	known	silent	c.1107	p.R369	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA4	HGNC	ENSG00000101204				31	0	0	34	7	17.0732
PRPF6	0	genome.wustl.edu	37	20	62663288	62663288	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	62663288	62663288	G	A	SNP	PRPF6	ENST00000266079	human	ensembl	74_37	+1	known	missense	c.2564	p.R855Q	1.000	smart_TPR_repeat	pfam_PRP1_N,smart_HAT,smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PRPF6	HGNC	ENSG00000101161				182	0	0	133	39	22.6744
MYT1	0	genome.wustl.edu	37	20	62871235	62871235	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	62871235	62871235	C	T	SNP	MYT1	ENST00000536311	human	ensembl	74_37	+1	known	silent	c.3297	p.A1099	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1	HGNC	ENSG00000196132				159	0	0	157	34	17.801
TPTE	0	genome.wustl.edu	37	21	10969092	10969092	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	10969092	10969092	C	T	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	silent	c.156	p.V52	0.000	NULL	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157				297	0	0	208	36	14.7541
ANKRD20A11P	0	genome.wustl.edu	37	21	15289943	15289943	+	RNA	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	15289943	15289943	T	A	SNP	ANKRD20A11P	ENST00000442192	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.232	-	-	-	no_errors	ANKRD20A11P	HGNC	ENSG00000215559				79	0	0	59	8	11.9403
NRIP1	0	genome.wustl.edu	37	21	16337566	16337566	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	16337566	16337566	C	T	SNP	NRIP1	ENST00000318948	human	ensembl	74_37	-1	known	missense	c.2948	p.G983E	0.724	NULL	NULL	-	no_errors	NRIP1	HGNC	ENSG00000180530				168	0	0	127	24	15.894
NCAM2	0	genome.wustl.edu	37	21	22658687	22658687	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	22658687	22658687	G	A	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	missense	c.436	p.V146I	0.979	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654				152	0	0	106	8	7.01754
ADAMTS5	0	genome.wustl.edu	37	21	28337870	28337870	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	28337870	28337870	G	A	SNP	ADAMTS5	ENST00000284987	human	ensembl	74_37	-1	known	missense	c.841	p.R281W	0.962	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_ADAM_spacer1,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS5,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS5	HGNC	ENSG00000154736				39	0	0	26	11	29.7297
USP16	0	genome.wustl.edu	37	21	30407165	30407165	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	30407165	30407165	G	A	SNP	USP16	ENST00000334352	human	ensembl	74_37	+1	known	missense	c.248	p.G83D	1.000	pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP16	HGNC	ENSG00000156256				121	0	0	72	16	18.1818
EVA1C	0	genome.wustl.edu	37	21	33840140	33840140	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	33840140	33840140	G	A	SNP	EVA1C	ENST00000300255	human	ensembl	74_37	+1	known	silent	c.618	p.E206	0.000	pfam_Lectin_gal-bd_dom,pfscan_Lectin_gal-bd_dom	pfam_Lectin_gal-bd_dom,pfscan_Lectin_gal-bd_dom	-	no_errors	EVA1C	HGNC	ENSG00000166979				82	0	0	36	20	35.7143
KCNJ6	0	genome.wustl.edu	37	21	38997732	38997732	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	38997732	38997732	T	C	SNP	KCNJ6	ENST00000288309	human	ensembl	74_37	-1	known	missense	c.1001	p.Y334C	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.2	-	no_errors	KCNJ6	HGNC	ENSG00000157542				117	0	0	73	8	9.87654
HSF2BP	0	genome.wustl.edu	37	21	45076572	45076572	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	45076572	45076572	A	G	SNP	HSF2BP	ENST00000291560	human	ensembl	74_37	-1	known	missense	c.83	p.L28P	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	HSF2BP	HGNC	ENSG00000160207				279	0	0	153	41	21.134
TSPEAR	0	genome.wustl.edu	37	21	45947252	45947252	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	45947252	45947252	C	T	SNP	TSPEAR	ENST00000323084	human	ensembl	74_37	-1	known	missense	c.1072	p.E358K	0.458	pfscan_EAR	pfam_EPTP,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894				190	0	0	121	36	22.9299
PRMT2	0	genome.wustl.edu	37	21	48071869	48071869	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	48071869	48071869	C	T	SNP	PRMT2	ENST00000334494	human	ensembl	74_37	+1	novel	missense	c.806	p.A269V	0.007	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Small_mtfrase_dom,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_tRNA_Trfase_Trm5/Tyw2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PRMT2	HGNC	ENSG00000160310				71	0	0	47	11	18.9655
GAB4	0	genome.wustl.edu	37	22	17473042	17473042	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	17473042	17473042	G	T	SNP	GAB4	ENST00000400588	human	ensembl	74_37	-1	known	missense	c.199	p.L67M	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB4	HGNC	ENSG00000215568				310	0	0	246	64	20.6452
ENSG00000161103	0	genome.wustl.edu	37	22	18846098	18846098	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	18846098	18846098	G	A	SNP	ENSG00000161103	ENST00000412938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	AC008132.13	Clone_based_vega_gene	ENSG00000161103				44	0	0	46	4	8
ENSG00000161103	0	genome.wustl.edu	37	22	18846121	18846121	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	18846121	18846121	C	T	SNP	ENSG00000161103	ENST00000412938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	AC008132.13	Clone_based_vega_gene	ENSG00000161103				38	0	0	53	4	7.01754
DGCR2	0	genome.wustl.edu	37	22	19048348	19048348	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	19048348	19048348	G	A	SNP	DGCR2	ENST00000545799	human	ensembl	74_37	-1	known	missense	c.737	p.A246V	0.000	NULL	pfam_LDrepeatLR_classA_rpt,superfamily_C-type_lectin_fold,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_C-type_lectin,pfscan_LDrepeatLR_classA_rpt	-	no_errors	DGCR2	HGNC	ENSG00000070413				19	0	0	13	8	38.0952
DGCR14	0	genome.wustl.edu	37	22	19124850	19124850	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	19124850	19124850	C	T	SNP	DGCR14	ENST00000252137	human	ensembl	74_37	-1	known	missense	c.1021	p.G341S	0.993	pfam_Nuclear_protein_DGCR14	pfam_Nuclear_protein_DGCR14	-	no_errors	DGCR14	HGNC	ENSG00000100056				239	0	0	227	50	18.0505
CLTCL1	0	genome.wustl.edu	37	22	19207438	19207438	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	19207438	19207438	C	T	SNP	CLTCL1	ENST00000263200	human	ensembl	74_37	-1	known	missense	c.2875	p.V959I	0.973	pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTCL1	HGNC	ENSG00000070371				169	0	0	101	40	28.3688
HIRA	0	genome.wustl.edu	37	22	19381879	19381879	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	19381879	19381879	C	T	SNP	HIRA	ENST00000263208	human	ensembl	74_37	-1	known	missense	c.808	p.A270T	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_Hira,pfam_WD40_repeat,pfam_HIRA_B_motif,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	HIRA	HGNC	ENSG00000100084				91	0	0	94	5	5.05051
GNB1L	0	genome.wustl.edu	37	22	19808148	19808148	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	19808148	19808148	G	A	SNP	GNB1L	ENST00000329517	human	ensembl	74_37	-1	known	missense	c.227	p.T76M	0.335	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GNB1L	HGNC	ENSG00000185838				59	0	0	50	10	16.6667
ARVCF	0	genome.wustl.edu	37	22	19960457	19960457	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	19960457	19960457	C	T	SNP	ARVCF	ENST00000263207	human	ensembl	74_37	-1	known	silent	c.2541	p.A847	0.620	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARVCF	HGNC	ENSG00000099889				181	0	0	146	25	14.6199
ARVCF	0	genome.wustl.edu	37	22	19960698	19960698	+	Silent	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	19960698	19960698	C	A	SNP	ARVCF	ENST00000263207	human	ensembl	74_37	-1	known	silent	c.2382	p.A794	0.996	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARVCF	HGNC	ENSG00000099889				18	0	0	15	4	21.0526
MED15	0	genome.wustl.edu	37	22	20920907	20920907	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	20920907	20920907	C	T	SNP	MED15	ENST00000263205	human	ensembl	74_37	+1	known	missense	c.844	p.P282S	0.756	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917				77	0	0	95	7	6.86275
TUBA3FP	0	genome.wustl.edu	37	22	21363262	21363262	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	21363262	21363262	C	T	SNP	TUBA3FP	ENST00000292748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.987	-	-	-	no_errors	TUBA3FP	HGNC	ENSG00000161149				118	0	0	83	31	27.193
HIC2	0	genome.wustl.edu	37	22	21800421	21800421	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	21800421	21800421	G	A	SNP	HIC2	ENST00000407464	human	ensembl	74_37	+1	known	missense	c.1237	p.G413R	0.990	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	HIC2	HGNC	ENSG00000169635				70	0	0	89	9	9.18367
CCDC116	0	genome.wustl.edu	37	22	21988657	21988657	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	21988657	21988657	C	T	SNP	CCDC116	ENST00000292779	human	ensembl	74_37	+1	known	missense	c.419	p.P140L	0.903	NULL	NULL	-	no_errors	CCDC116	HGNC	ENSG00000161180				132	1	0.75188	143	27	15.8824
ZNF280A	0	genome.wustl.edu	37	22	22868374	22868374	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	22868374	22868374	A	G	SNP	ZNF280A	ENST00000302097	human	ensembl	74_37	-1	known	silent	c.1581	p.A527	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280A	HGNC	ENSG00000169548				186	0	0	148	37	20
GGT1	0	genome.wustl.edu	37	22	25016911	25016911	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	25016911	25016911	C	T	SNP	GGT1	ENST00000248923	human	ensembl	74_37	+1	known	missense	c.607	p.R203W	0.922	pfam_GGT_peptidase,tigrfam_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase,tigrfam_GGT_peptidase	-	no_errors	GGT1	HGNC	ENSG00000100031				32	0	0	39	6	13.3333
SEZ6L	0	genome.wustl.edu	37	22	26688613	26688613	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	26688613	26688613	C	T	SNP	SEZ6L	ENST00000248933	human	ensembl	74_37	+1	known	silent	c.336	p.A112	0.001	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L	HGNC	ENSG00000100095				35	0	0	23	4	14.8148
C1QTNF6	0	genome.wustl.edu	37	22	37578651	37578651	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	37578651	37578651	C	T	SNP	C1QTNF6	ENST00000337843	human	ensembl	74_37	-1	known	silent	c.414	p.P138	0.952	pfam_Collagen,smart_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF6	HGNC	ENSG00000133466				87	0	0	59	15	20.2703
SOX10	0	genome.wustl.edu	37	22	38373997	38373997	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	38373997	38373997	C	A	SNP	SOX10	ENST00000360880	human	ensembl	74_37	-1	known	missense	c.574	p.G192C	0.860	NULL	pfam_Sox_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX10	HGNC	ENSG00000100146				31	0	0	28	9	24.3243
PDGFB	0	genome.wustl.edu	37	22	39626130	39626130	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	39626130	39626130	C	T	SNP	PDGFB	ENST00000331163	human	ensembl	74_37	-1	known	missense	c.560	p.R187Q	0.101	NULL	pfam_PDGF/VEGF_dom,pfam_PDGF_N,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PDGFB	HGNC	ENSG00000100311				75	0	0	63	16	20.2532
MGAT3	0	genome.wustl.edu	37	22	39884756	39884756	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	39884756	39884756	G	A	SNP	MGAT3	ENST00000341184	human	ensembl	74_37	+1	known	silent	c.1404	p.T468	0.011	pfam_Glyco_trans_17	pfam_Glyco_trans_17	-	no_errors	MGAT3	HGNC	ENSG00000128268				27	0	0	19	3	13.6364
MKL1	0	genome.wustl.edu	37	22	40814610	40814610	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	40814610	40814610	G	T	SNP	MKL1	ENST00000355630	human	ensembl	74_37	-1	known	missense	c.1832	p.P611H	0.046	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL1	HGNC	ENSG00000196588				15	0	0	27	5	15.625
TOB2	0	genome.wustl.edu	37	22	41832815	41832815	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	41832815	41832815	C	T	SNP	TOB2	ENST00000327492	human	ensembl	74_37	-1	known	missense	c.535	p.A179T	1.000	NULL	pfam_Anti_prolifrtn,pfam_Ataxin-2_C,smart_Anti_prolifrtn,prints_Anti_prolifrtn	-	no_errors	TOB2	HGNC	ENSG00000183864				82	0	0	56	13	18.8406
TTLL1	0	genome.wustl.edu	37	22	43435868	43435868	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	43435868	43435868	G	T	SNP	TTLL1	ENST00000266254	human	ensembl	74_37	-1	known	missense	c.1186	p.L396M	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL1	HGNC	ENSG00000100271				171	0	0	155	20	11.4286
EFCAB6	0	genome.wustl.edu	37	22	44011785	44011785	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	44011785	44011785	G	A	SNP	EFCAB6	ENST00000262726	human	ensembl	74_37	-1	known	missense	c.2483	p.A828V	0.631	NULL	pfam_EF_hand_Ca-bd_contain_6,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB6	HGNC	ENSG00000186976				78	0	0	58	4	6.45161
PNPLA5	0	genome.wustl.edu	37	22	44287040	44287040	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	44287040	44287040	C	T	SNP	PNPLA5	ENST00000216177	human	ensembl	74_37	-1	known	missense	c.328	p.V110I	0.137	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA5	HGNC	ENSG00000100341				18	0	0	16	3	15.7895
FBLN1	0	genome.wustl.edu	37	22	45970515	45970515	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	45970515	45970515	G	A	SNP	FBLN1	ENST00000327858	human	ensembl	74_37	+1	known	missense	c.1822	p.E608K	1.000	pirsf_Fibulin-1	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,smart_Anaphylatoxin/fibulin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_Fibulin-1,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN1	HGNC	ENSG00000077942				36	0	0	32	9	21.9512
PPARA	0	genome.wustl.edu	37	22	46631044	46631044	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	46631044	46631044	C	A	SNP	PPARA	ENST00000262735	human	ensembl	74_37	+1	known	missense	c.1174	p.L392I	0.127	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_1Cnucl_rcpt_A,prints_1Cnucl_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	PPARA	HGNC	ENSG00000186951				138	0	0	92	30	24.5902
CELSR1	0	genome.wustl.edu	37	22	46794456	46794456	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	46794456	46794456	C	G	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.5491	p.V1831L	0.936	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				63	0	0	39	15	27.7778
BRD1	0	genome.wustl.edu	37	22	50217324	50217324	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	50217324	50217324	G	A	SNP	BRD1	ENST00000216267	human	ensembl	74_37	-1	known	silent	c.642	p.D214	0.902	superfamily_Znf_FYVE_PHD,pfscan_Znf_PHD-finger	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,prints_Bromodomain,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	BRD1	HGNC	ENSG00000100425				34	0	0	34	4	10.5263
HDAC10	0	genome.wustl.edu	37	22	50686680	50686680	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	50686680	50686680	G	T	SNP	HDAC10	ENST00000216271	human	ensembl	74_37	-1	known	missense	c.1055	p.P352Q	0.406	NULL	pfam_His_deacetylse_dom,prints_His_deacetylse	-	no_errors	HDAC10	HGNC	ENSG00000100429				84	0	0	79	17	17.7083
PLXNB2	0	genome.wustl.edu	37	22	50714329	50714329	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	50714329	50714329	A	G	SNP	PLXNB2	ENST00000359337	human	ensembl	74_37	-1	known	missense	c.5401	p.Y1801H	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB2	HGNC	ENSG00000196576				71	0	0	43	6	12.2449
IMPG2	0	genome.wustl.edu	37	3	100964765	100964765	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	100964765	100964765	G	T	SNP	IMPG2	ENST00000193391	human	ensembl	74_37	-1	known	missense	c.1424	p.S475Y	0.320	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG2	HGNC	ENSG00000081148				212	0	0	146	37	20.2186
NXPE3	0	genome.wustl.edu	37	3	101520160	101520160	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	101520160	101520160	C	T	SNP	NXPE3	ENST00000273347	human	ensembl	74_37	+1	known	nonsense	c.175	p.R59*	1.000	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE3	HGNC	ENSG00000144815				306	0	0	272	16	5.55556
NXPE3	0	genome.wustl.edu	37	3	101540650	101540650	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	101540650	101540650	G	A	SNP	NXPE3	ENST00000273347	human	ensembl	74_37	+1	known	missense	c.1532	p.R511K	1.000	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE3	HGNC	ENSG00000144815				171	0	0	135	55	28.9474
TMPRSS7	0	genome.wustl.edu	37	3	111766741	111766741	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	111766741	111766741	G	A	SNP	TMPRSS7	ENST00000419127	human	ensembl	74_37	+1	known	missense	c.508	p.A170T	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS7	HGNC	ENSG00000176040				114	0	0	94	23	19.6581
KIAA2018	0	genome.wustl.edu	37	3	113375850	113375850	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	113375850	113375850	T	C	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	missense	c.4679	p.Q1560R	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542				164	0	0	122	26	17.5676
KIAA1407	0	genome.wustl.edu	37	3	113753973	113753973	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	113753973	113753973	C	T	SNP	KIAA1407	ENST00000295878	human	ensembl	74_37	-1	known	missense	c.617	p.R206H	0.948	NULL	NULL	-	no_errors	KIAA1407	HGNC	ENSG00000163617				195	0	0	180	14	7.21649
ARHGAP31	0	genome.wustl.edu	37	3	119120974	119120974	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	119120974	119120974	G	A	SNP	ARHGAP31	ENST00000264245	human	ensembl	74_37	+1	known	missense	c.1375	p.D459N	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081				190	0	0	144	13	8.28025
GTF2E1	0	genome.wustl.edu	37	3	120469477	120469477	+	Nonsense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	120469477	120469477	T	G	SNP	GTF2E1	ENST00000283875	human	ensembl	74_37	+1	known	nonsense	c.78	p.Y26*	1.000	pfam_TFIIEa/SarR/Rpc3_HTH_dom	pfam_TFIIEa/SarR/Rpc3_HTH_dom,pfam_TFIIE_asu_C,pfam_Znf_TFIIB,smart_TFIIE_asu	-	no_errors	GTF2E1	HGNC	ENSG00000153767				208	1	0.478469	184	10	5.15464
POLQ	0	genome.wustl.edu	37	3	121179017	121179017	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	121179017	121179017	A	G	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	silent	c.7032	p.H2344	0.006	pfam_DNA-dir_DNA_pol_A_palm_dom,smart_DNA-dir_DNA_pol_A_palm_dom	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341				121	0	0	99	26	20.8
POLQ	0	genome.wustl.edu	37	3	121206610	121206610	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	121206610	121206610	C	T	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	missense	c.5168	p.R1723H	0.000	NULL	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341				219	0	0	171	23	11.8557
GOLGB1	0	genome.wustl.edu	37	3	121411357	121411357	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	121411357	121411357	T	C	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	missense	c.6839	p.D2280G	1.000	smart_Leu_zip_homeo	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230				178	0	0	137	8	5.51724
HSPBAP1	0	genome.wustl.edu	37	3	122512524	122512524	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	122512524	122512524	C	T	SNP	HSPBAP1	ENST00000306103	human	ensembl	74_37	-1	known	missense	c.4	p.A2T	0.980	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom,prints_HSPB1-associated_protein_1	-	no_errors	HSPBAP1	HGNC	ENSG00000169087				110	0	0	85	35	29.1667
SEMA5B	0	genome.wustl.edu	37	3	122646807	122646807	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	122646807	122646807	G	A	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.842	p.A281V	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684				111	0	0	107	10	8.54701
PPARG	0	genome.wustl.edu	37	3	12421297	12421297	+	Silent	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	12421297	12421297	C	A	SNP	PPARG	ENST00000287820	human	ensembl	74_37	+1	known	silent	c.177	p.S59	1.000	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_PPARgamma_N,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_1Cnucl_rcpt,prints_1Cnucl_rcpt_G,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	PPARG	HGNC	ENSG00000132170				228	0	0	169	48	22.1198
KALRN	0	genome.wustl.edu	37	3	124438126	124438126	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	124438126	124438126	C	T	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.8770	p.R2924W	0.992	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145				70	0	0	69	23	25
ITGB5	0	genome.wustl.edu	37	3	124578267	124578267	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	124578267	124578267	G	T	SNP	ITGB5	ENST00000296181	human	ensembl	74_37	-1	known	silent	c.183	p.T61	0.525	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_VWF_A,prints_Integrin_bsu	-	no_errors	ITGB5	HGNC	ENSG00000082781				87	0	0	71	21	22.8261
SLC41A3	0	genome.wustl.edu	37	3	125787084	125787084	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	125787084	125787084	G	A	SNP	SLC41A3	ENST00000514023	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SLC41A3	HGNC	ENSG00000114544				51	0	0	54	12	18.1818
PLXNA1	0	genome.wustl.edu	37	3	126730890	126730890	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	126730890	126730890	G	A	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	silent	c.2202	p.Q734	1.000	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				69	0	0	67	19	22.093
KBTBD12	0	genome.wustl.edu	37	3	127642914	127642914	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	127642914	127642914	C	T	SNP	KBTBD12	ENST00000405109	human	ensembl	74_37	+1	known	missense	c.1010	p.A337V	1.000	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD12	HGNC	ENSG00000187715				205	0	0	167	36	17.734
EEFSEC	0	genome.wustl.edu	37	3	128127069	128127069	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	128127069	128127069	C	T	SNP	EEFSEC	ENST00000254730	human	ensembl	74_37	+1	known	silent	c.1758	p.F586	0.935	NULL	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EEFSEC	HGNC	ENSG00000132394				85	0	0	74	22	22.9167
PLXND1	0	genome.wustl.edu	37	3	129290521	129290521	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	129290521	129290521	T	C	SNP	PLXND1	ENST00000324093	human	ensembl	74_37	-1	known	missense	c.3244	p.S1082G	1.000	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXND1	HGNC	ENSG00000004399				116	0	0	76	34	30.9091
ACAD11	0	genome.wustl.edu	37	3	132324009	132324009	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	132324009	132324009	C	A	SNP	ACAD11	ENST00000264990	human	ensembl	74_37	-1	known	missense	c.1455	p.E485D	1.000	pfam_AcylCoA_DH/ox_N,superfamily_AcylCoA_DH/oxidase_NM_dom	pfam_Aminoglycoside_PTrfase,pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,pfam_AcylCoA_DH/ox_N,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C,superfamily_Kinase-like_dom	-	no_errors	ACAD11	HGNC	ENSG00000240303				164	0	0	144	21	12.7273
CLSTN2	0	genome.wustl.edu	37	3	140251228	140251228	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	140251228	140251228	C	T	SNP	CLSTN2	ENST00000458420	human	ensembl	74_37	+1	known	silent	c.1407	p.Y469	1.000	superfamily_ConA-like_lec_gl_sf	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN2	HGNC	ENSG00000158258				191	0	0	145	33	18.5393
CHST2	0	genome.wustl.edu	37	3	142840665	142840665	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	142840665	142840665	C	T	SNP	CHST2	ENST00000309575	human	ensembl	74_37	+1	known	missense	c.1007	p.A336V	0.998	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST2	HGNC	ENSG00000175040				20	0	0	23	5	17.8571
GYG1	0	genome.wustl.edu	37	3	148714687	148714687	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	148714687	148714687	T	C	SNP	GYG1	ENST00000345003	human	ensembl	74_37	+1	known	silent	c.477	p.F159	1.000	pfam_Glyco_trans_8	pfam_Glyco_trans_8	-	no_errors	GYG1	HGNC	ENSG00000163754				154	0	0	137	19	12.1795
FAM194A	0	genome.wustl.edu	37	3	150387141	150387141	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	150387141	150387141	G	T	SNP	FAM194A	ENST00000295910	human	ensembl	74_37	-1	known	missense	c.1441	p.L481I	1.000	NULL	NULL	-	no_errors	FAM194A	HGNC	ENSG00000163645				193	0	0	147	37	20.1087
ARHGEF26	0	genome.wustl.edu	37	3	153839836	153839836	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	153839836	153839836	C	T	SNP	ARHGEF26	ENST00000356448	human	ensembl	74_37	+1	known	missense	c.55	p.R19W	1.000	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF26	HGNC	ENSG00000114790				18	0	0	26	9	25.7143
PLCH1	0	genome.wustl.edu	37	3	155282736	155282736	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	155282736	155282736	C	T	SNP	PLCH1	ENST00000340059	human	ensembl	74_37	-1	known	missense	c.1001	p.R334Q	1.000	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH1	HGNC	ENSG00000114805				99	0	0	82	28	25.4545
MFSD1	0	genome.wustl.edu	37	3	158537447	158537447	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	158537447	158537447	C	T	SNP	MFSD1	ENST00000415822	human	ensembl	74_37	+1	known	missense	c.809	p.T270M	0.998	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD1	HGNC	ENSG00000118855				92	0	0	64	12	15.7895
SI	0	genome.wustl.edu	37	3	164735854	164735854	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	164735854	164735854	A	G	SNP	SI	ENST00000264382	human	ensembl	74_37	-1	known	missense	c.3424	p.Y1142H	1.000	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402				115	0	0	77	22	22.2222
WDR49	0	genome.wustl.edu	37	3	167272480	167272480	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	167272480	167272480	C	A	SNP	WDR49	ENST00000308378	human	ensembl	74_37	-1	known	missense	c.758	p.G253V	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR49	HGNC	ENSG00000174776				216	0	0	157	19	10.7955
SAMD7	0	genome.wustl.edu	37	3	169642898	169642898	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	169642898	169642898	A	G	SNP	SAMD7	ENST00000335556	human	ensembl	74_37	+1	known	silent	c.264	p.E88	0.997	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD7	HGNC	ENSG00000187033				75	0	0	62	19	23.4568
SLC7A14	0	genome.wustl.edu	37	3	170201230	170201230	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	170201230	170201230	C	A	SNP	SLC7A14	ENST00000231706	human	ensembl	74_37	-1	known	missense	c.988	p.G330W	1.000	pfam_AA-permease/SLC12A_dom	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC7A14	HGNC	ENSG00000013293				202	0	0	172	24	12.2449
TNIK	0	genome.wustl.edu	37	3	170857333	170857333	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	170857333	170857333	G	A	SNP	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	nonsense	c.1345	p.R449*	1.000	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310				213	0	0	183	40	17.9372
PIK3CA	0	genome.wustl.edu	37	3	178916876	178916876	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	178916876	178916876	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.263	p.R88Q	1.000	pfam_PI3K_adapt-bd_dom,smart_PI3K_adapt-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879				212	0	0	186	24	11.4286
SOX2	0	genome.wustl.edu	37	3	181430542	181430542	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	181430542	181430542	C	T	SNP	SOX2	ENST00000325404	human	ensembl	74_37	+1	known	silent	c.394	p.L132	1.000	pfam_TF_SOX	pfam_TF_SOX,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX2	HGNC	ENSG00000181449				12	0	0	8	4	33.3333
MCF2L2	0	genome.wustl.edu	37	3	183017896	183017896	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	183017896	183017896	C	T	SNP	MCF2L2	ENST00000328913	human	ensembl	74_37	-1	known	missense	c.1202	p.R401Q	0.983	smart_Spectrin/alpha-actinin	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2L2	HGNC	ENSG00000053524				156	0	0	71	30	29.703
TPRG1	0	genome.wustl.edu	37	3	189028328	189028328	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	189028328	189028328	G	T	SNP	TPRG1	ENST00000345063	human	ensembl	74_37	+1	known	missense	c.633	p.K211N	1.000	NULL	pfam_Inositol_phosphatase	-	no_errors	TPRG1	HGNC	ENSG00000188001				208	0	0	158	26	14.1304
GP5	0	genome.wustl.edu	37	3	194118298	194118298	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	194118298	194118298	G	A	SNP	GP5	ENST00000323007	human	ensembl	74_37	-1	known	silent	c.714	p.F238	0.814	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	GP5	HGNC	ENSG00000178732				275	0	0	200	42	17.3554
ACAP2	0	genome.wustl.edu	37	3	195022892	195022892	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	195022892	195022892	C	G	SNP	ACAP2	ENST00000326793	human	ensembl	74_37	-1	known	missense	c.1128	p.K376N	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP2	HGNC	ENSG00000114331				303	0	0	198	65	24.7148
MUC4	0	genome.wustl.edu	37	3	195497165	195497165	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	195497165	195497165	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.13320	p.N4440	0.000	smart_Nidogen_extracell_dom	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				82	0	0	53	25	32.0513
KCNH8	0	genome.wustl.edu	37	3	19575324	19575324	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	19575324	19575324	G	A	SNP	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	silent	c.3057	p.T1019	0.001	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960				458	0	0	399	22	5.22565
LRCH3	0	genome.wustl.edu	37	3	197547200	197547200	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	197547200	197547200	T	C	SNP	LRCH3	ENST00000438796	human	ensembl	74_37	+1	known	missense	c.539	p.V180A	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_CH-domain,superfamily_CH-domain,smart_Leu-rich_rpt_typical-subtyp,smart_CH-domain,pfscan_CH-domain	-	no_errors	LRCH3	HGNC	ENSG00000186001				139	0	0	113	22	16.2963
TOP2B	0	genome.wustl.edu	37	3	25650830	25650830	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	25650830	25650830	T	C	SNP	TOP2B	ENST00000264331	human	ensembl	74_37	-1	known	missense	c.3937	p.R1313G	1.000	NULL	pfam_Topo_IIA_A/C,pfam_Topo_IIA_bsu_dom2,pfam_DTHCT,pfam_HATPase_ATP-bd,superfamily_Topo_IIA_like_dom,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_Topo_IIA,smart_Topo_IIA_A/C,prints_TopoII_euk,prints_Topo_IIA,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	TOP2B	HGNC	ENSG00000077097				17	0	0	18	4	18.1818
TOP2B	0	genome.wustl.edu	37	3	25668765	25668765	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	25668765	25668765	T	A	SNP	TOP2B	ENST00000264331	human	ensembl	74_37	-1	known	missense	c.1929	p.K643N	1.000	superfamily_Topo_IIA_like_dom,smart_Topo_IIA,prints_TopoII_euk,prints_Topo_IIA	pfam_Topo_IIA_A/C,pfam_Topo_IIA_bsu_dom2,pfam_DTHCT,pfam_HATPase_ATP-bd,superfamily_Topo_IIA_like_dom,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_Topo_IIA,smart_Topo_IIA_A/C,prints_TopoII_euk,prints_Topo_IIA,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	TOP2B	HGNC	ENSG00000077097				246	0	0	178	49	21.5859
RBMS3	0	genome.wustl.edu	37	3	29938929	29938929	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	29938929	29938929	C	T	SNP	RBMS3	ENST00000383767	human	ensembl	74_37	+1	known	missense	c.851	p.T284M	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA	-	no_errors	RBMS3	HGNC	ENSG00000144642				251	0	0	222	38	14.6154
TRIM71	0	genome.wustl.edu	37	3	32932817	32932817	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	32932817	32932817	G	A	SNP	TRIM71	ENST00000383763	human	ensembl	74_37	+1	known	silent	c.2121	p.A707	0.041	pfam_NHL_repeat,pfscan_NHL_repeat_subgr	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM71	HGNC	ENSG00000206557				72	0	0	58	16	21.6216
CLASP2	0	genome.wustl.edu	37	3	33543196	33543196	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	33543196	33543196	G	A	SNP	CLASP2	ENST00000399362	human	ensembl	74_37	-1	known	missense	c.4403	p.A1468V	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP2	HGNC	ENSG00000163539				158	0	0	131	20	13.245
CLASP2	0	genome.wustl.edu	37	3	33729800	33729800	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	33729800	33729800	C	T	SNP	CLASP2	ENST00000399362	human	ensembl	74_37	-1	known	missense	c.439	p.V147M	1.000	pfam_CLASP_N_dom,superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP2	HGNC	ENSG00000163539				17	0	0	15	4	21.0526
TRANK1	0	genome.wustl.edu	37	3	36874710	36874710	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	36874710	36874710	C	T	SNP	TRANK1	ENST00000429976	human	ensembl	74_37	-1	known	missense	c.6232	p.V2078M	1.000	NULL	pfam_UvrD-like_ATP-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom	-	no_errors	TRANK1	HGNC	ENSG00000168016				76	0	0	48	12	20
TRANK1	0	genome.wustl.edu	37	3	36897192	36897192	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	36897192	36897192	A	G	SNP	TRANK1	ENST00000429976	human	ensembl	74_37	-1	known	missense	c.3889	p.Y1297H	0.998	superfamily_P-loop_NTPase	pfam_UvrD-like_ATP-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom	-	no_errors	TRANK1	HGNC	ENSG00000168016				393	0	0	326	77	19.1067
LRRFIP2	0	genome.wustl.edu	37	3	37162993	37162993	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	37162993	37162993	C	T	SNP	LRRFIP2	ENST00000336686	human	ensembl	74_37	-1	known	missense	c.320	p.G107D	1.000	pfam_Leu-rich_rep_flightless-int_pr	pfam_Leu-rich_rep_flightless-int_pr,superfamily_bHLH_dom,superfamily_Prefoldin	-	no_errors	LRRFIP2	HGNC	ENSG00000093167				101	0	0	83	5	5.68182
GOLGA4	0	genome.wustl.edu	37	3	37292888	37292888	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	37292888	37292888	G	A	SNP	GOLGA4	ENST00000361924	human	ensembl	74_37	+1	known	silent	c.75	p.A25	0.840	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,superfamily_t-SNARE,superfamily_Prefoldin,smart_GRIP,pfscan_GRIP	-	no_errors	GOLGA4	HGNC	ENSG00000144674				84	0	0	88	10	10.2041
VILL	0	genome.wustl.edu	37	3	38037234	38037234	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	38037234	38037234	A	G	SNP	VILL	ENST00000283713	human	ensembl	74_37	+1	known	missense	c.346	p.R116G	1.000	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VILL	HGNC	ENSG00000136059				93	0	0	74	15	16.8539
SCN5A	0	genome.wustl.edu	37	3	38601896	38601896	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	38601896	38601896	G	A	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	silent	c.3987	p.G1329	0.990	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				53	0	0	42	6	12.5
SCN5A	0	genome.wustl.edu	37	3	38608015	38608015	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	38608015	38608015	G	A	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.3725	p.A1242V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				167	1	0.595238	138	36	20.6897
SCN5A	0	genome.wustl.edu	37	3	38620974	38620974	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	38620974	38620974	G	C	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.3241	p.P1081A	0.994	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				21	0	0	21	7	25
SCN5A	0	genome.wustl.edu	37	3	38639229	38639229	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	38639229	38639229	G	A	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	silent	c.2253	p.V751	0.994	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				86	0	0	83	25	23.1481
SCN10A	0	genome.wustl.edu	37	3	38739639	38739639	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	38739639	38739639	T	C	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.5072	p.D1691G	0.999	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				106	0	0	71	21	22.8261
CX3CR1	0	genome.wustl.edu	37	3	39307753	39307753	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	39307753	39307753	G	A	SNP	CX3CR1	ENST00000358309	human	ensembl	74_37	-1	known	missense	c.344	p.T115I	0.240	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CX3CR1,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Duffy_chemokine_rcpt,prints_Chemokine_CXCR4	-	no_errors	CX3CR1	HGNC	ENSG00000168329				165	0	0	178	11	5.82011
MYRIP	0	genome.wustl.edu	37	3	40251387	40251387	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	40251387	40251387	C	T	SNP	MYRIP	ENST00000302541	human	ensembl	74_37	+1	known	missense	c.1708	p.R570W	0.019	pfam_Myrip/Melanophilin	pfam_Myrip/Melanophilin,superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	MYRIP	HGNC	ENSG00000170011				116	0	0	99	28	22.0472
NKTR	0	genome.wustl.edu	37	3	42678379	42678379	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	42678379	42678379	A	T	SNP	NKTR	ENST00000232978	human	ensembl	74_37	+1	known	missense	c.1183	p.S395C	0.999	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	NKTR	HGNC	ENSG00000114857				188	0	0	128	22	14.6667
HHATL	0	genome.wustl.edu	37	3	42740589	42740589	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	42740589	42740589	C	T	SNP	HHATL	ENST00000310417	human	ensembl	74_37	-1	known	missense	c.223	p.V75I	0.004	NULL	pfam_MBOAT_fam	-	no_errors	HHATL	HGNC	ENSG00000010282				86	0	0	79	22	21.7822
CHL1	0	genome.wustl.edu	37	3	439979	439979	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	439979	439979	C	T	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.3164	p.P1055L	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121				123	0	0	95	6	5.94059
ZKSCAN7	0	genome.wustl.edu	37	3	44612251	44612251	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	44612251	44612251	C	A	SNP	ZKSCAN7	ENST00000273320	human	ensembl	74_37	+1	known	missense	c.1649	p.P550H	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN7	HGNC	ENSG00000196345				209	0	0	165	42	20.2899
FYCO1	0	genome.wustl.edu	37	3	46008705	46008705	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	46008705	46008705	G	A	SNP	FYCO1	ENST00000535325	human	ensembl	74_37	-1	known	silent	c.2121	p.G707	0.000	superfamily_Prefoldin	pfam_Znf_FYVE,pfam_Run,superfamily_GOLD,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Znf_FYVE,pfscan_GOLD,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	FYCO1	HGNC	ENSG00000163820				296	1	0.3367	260	22	7.80142
LTF	0	genome.wustl.edu	37	3	46482949	46482949	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	46482949	46482949	C	T	SNP	LTF	ENST00000231751	human	ensembl	74_37	-1	known	missense	c.1681	p.V561I	0.996	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	LTF	HGNC	ENSG00000012223				183	0	0	110	39	26.1745
SCAP	0	genome.wustl.edu	37	3	47462130	47462130	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	47462130	47462130	A	T	SNP	SCAP	ENST00000265565	human	ensembl	74_37	-1	known	missense	c.1477	p.S493T	0.994	NULL	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650				55	0	0	31	11	26.1905
SCAP	0	genome.wustl.edu	37	3	47467488	47467488	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	47467488	47467488	C	T	SNP	SCAP	ENST00000265565	human	ensembl	74_37	-1	known	silent	c.909	p.T303	0.840	pfam_Patched,pfscan_SSD	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650				45	0	0	37	5	11.9048
CSPG5	0	genome.wustl.edu	37	3	47619165	47619165	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	47619165	47619165	G	A	SNP	CSPG5	ENST00000383738	human	ensembl	74_37	-1	known	silent	c.351	p.S117	0.987	pfam_Chon_Sulph_att	pfam_Chon_Sulph_att,pfam_Neural_ProG_Cyt	-	no_errors	CSPG5	HGNC	ENSG00000114646				69	0	0	54	24	30.7692
COL7A1	0	genome.wustl.edu	37	3	48621735	48621735	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	48621735	48621735	A	G	SNP	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	missense	c.4193	p.M1398T	0.428	NULL	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270				27	0	0	36	7	16.2791
CELSR3	0	genome.wustl.edu	37	3	48698284	48698284	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	48698284	48698284	A	G	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.1784	p.I595T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				63	0	0	51	8	13.5593
CCDC71	0	genome.wustl.edu	37	3	49201445	49201445	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	49201445	49201445	C	T	SNP	CCDC71	ENST00000321895	human	ensembl	74_37	-1	known	missense	c.197	p.R66H	1.000	NULL	NULL	-	no_errors	CCDC71	HGNC	ENSG00000177352				128	0	0	94	27	22.314
KLHDC8B	0	genome.wustl.edu	37	3	49212181	49212181	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	49212181	49212181	G	A	SNP	KLHDC8B	ENST00000332780	human	ensembl	74_37	+1	known	missense	c.548	p.R183H	1.000	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,smart_Kelch_1	-	no_errors	KLHDC8B	HGNC	ENSG00000185909				49	0	0	29	8	21.6216
USP4	0	genome.wustl.edu	37	3	49332009	49332009	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	49332009	49332009	C	T	SNP	USP4	ENST00000265560	human	ensembl	74_37	-1	known	missense	c.1714	p.V572M	0.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,smart_Pept_C19_DUSP,pfscan_Peptidase_C19/C67	-	no_errors	USP4	HGNC	ENSG00000114316				86	0	0	82	15	15.4639
AMT	0	genome.wustl.edu	37	3	49457336	49457336	+	RNA	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	49457336	49457336	A	G	SNP	AMT	ENST00000480957	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AMT	HGNC	ENSG00000145020				32	0	0	33	8	19.5122
DAG1	0	genome.wustl.edu	37	3	49548116	49548116	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	49548116	49548116	T	C	SNP	DAG1	ENST00000308775	human	ensembl	74_37	+1	known	missense	c.149	p.M50T	1.000	NULL	pfam_DAG1,superfamily_Alpha-dystroglycan_domain_2,superfamily_Cadherin-like,smart_Cadg	-	no_errors	DAG1	HGNC	ENSG00000173402				66	0	0	64	20	23.8095
APEH	0	genome.wustl.edu	37	3	49713595	49713595	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	49713595	49713595	C	T	SNP	APEH	ENST00000296456	human	ensembl	74_37	+1	known	silent	c.549	p.D183	0.004	NULL	pfam_Peptidase_S9,pfam_AB_hydrolase_1,pfam_Dienelactn_hydro	-	no_errors	APEH	HGNC	ENSG00000164062				89	0	0	65	17	20.7317
MST1	0	genome.wustl.edu	37	3	49723549	49723549	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	49723549	49723549	G	A	SNP	MST1	ENST00000449682	human	ensembl	74_37	-1	known	missense	c.1093	p.R365C	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	MST1	HGNC	ENSG00000173531				14	0	0	18	3	14.2857
RBM5	0	genome.wustl.edu	37	3	50155809	50155809	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	50155809	50155809	G	A	SNP	RBM5	ENST00000347869	human	ensembl	74_37	+1	known	missense	c.2368	p.A790T	0.970	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM5	HGNC	ENSG00000003756				48	0	0	45	4	8.16327
VPRBP	0	genome.wustl.edu	37	3	51458110	51458110	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	51458110	51458110	G	T	SNP	VPRBP	ENST00000335891	human	ensembl	74_37	-1	known	silent	c.967	p.R323	1.000	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	VPRBP	HGNC	ENSG00000145041				149	0	0	125	41	24.6988
STAB1	0	genome.wustl.edu	37	3	52551965	52551965	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	52551965	52551965	C	T	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	silent	c.4707	p.C1569	0.035	superfamily_FAS1_domain,smart_EG-like_dom,pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327				104	0	0	77	20	20.6186
PDHB	0	genome.wustl.edu	37	3	58414314	58414314	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	58414314	58414314	T	C	SNP	PDHB	ENST00000302746	human	ensembl	74_37	-1	known	missense	c.820	p.M274V	0.998	pfam_Transketolase_C,superfamily_Transketo_C/Pyr-ferredox_oxred	pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	PDHB	HGNC	ENSG00000168291				122	0	0	92	26	22.0339
ENSG00000244383	0	genome.wustl.edu	37	3	58619877	58619877	+	RNA	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	58619877	58619877	C	T	SNP	ENSG00000244383	ENST00000464125	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-475O23.3	Clone_based_vega_gene	ENSG00000244383				21	0	0	32	6	15.7895
CADPS	0	genome.wustl.edu	37	3	62423862	62423862	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	62423862	62423862	C	T	SNP	CADPS	ENST00000383710	human	ensembl	74_37	-1	known	missense	c.3694	p.A1232T	1.000	NULL	pfam_Ca-dep_secretion_activator,superfamily_C2_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	CADPS	HGNC	ENSG00000163618				56	0	0	71	6	7.79221
PRICKLE2	0	genome.wustl.edu	37	3	64133159	64133159	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	64133159	64133159	C	T	SNP	PRICKLE2	ENST00000295902	human	ensembl	74_37	-1	known	missense	c.1007	p.R336H	1.000	NULL	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE2	HGNC	ENSG00000163637				216	0	0	192	53	21.6327
EPHA3	0	genome.wustl.edu	37	3	89259309	89259309	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	89259309	89259309	T	C	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	silent	c.453	p.S151	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524				321	0	0	247	53	17.6667
FGFRL1	0	genome.wustl.edu	37	4	1017838	1017838	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	1017838	1017838	G	A	SNP	FGFRL1	ENST00000264748	human	ensembl	74_37	+1	known	missense	c.667	p.V223M	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FGFRL1	HGNC	ENSG00000127418				12	0	0	10	4	28.5714
ENPEP	0	genome.wustl.edu	37	4	111397859	111397859	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	111397859	111397859	G	A	SNP	ENPEP	ENST00000265162	human	ensembl	74_37	+1	known	missense	c.289	p.V97I	0.006	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC	ENSG00000138792				170	0	0	156	41	20.8122
NDST3	0	genome.wustl.edu	37	4	118975701	118975701	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	118975701	118975701	A	G	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	silent	c.636	p.K212	0.975	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100				364	0	0	279	65	18.8953
PRSS12	0	genome.wustl.edu	37	4	119237471	119237471	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	119237471	119237471	G	A	SNP	PRSS12	ENST00000296498	human	ensembl	74_37	-1	known	silent	c.1158	p.V386	0.994	superfamily_Srcr_rcpt-rel	pfam_SRCR,pfam_Peptidase_S1,pfam_Kringle,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_Kringle-like,smart_Kringle,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_Kringle,pfscan_SRCR,pfscan_Peptidase_S1,prints_SRCR,prints_Peptidase_S1A	-	no_errors	PRSS12	HGNC	ENSG00000164099				94	0	0	83	18	17.8218
EXOSC9	0	genome.wustl.edu	37	4	122731160	122731160	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	122731160	122731160	G	A	SNP	EXOSC9	ENST00000379663	human	ensembl	74_37	+1	known	missense	c.644	p.R215H	1.000	pfam_ExoRNase_PH_dom2,superfamily_ExoRNase_PH_dom2	pfam_ExoRNase_PH_dom1,pfam_ExoRNase_PH_dom2,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ExoRNase_PH_dom2	-	no_errors	EXOSC9	HGNC	ENSG00000123737				258	1	0.3861	214	42	16.4062
KIAA1109	0	genome.wustl.edu	37	4	123171679	123171679	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	123171679	123171679	G	A	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.5873	p.R1958Q	1.000	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688				180	0	0	140	26	15.6627
FAT4	0	genome.wustl.edu	37	4	126328095	126328095	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	126328095	126328095	G	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.5368	p.D1790N	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				302	1	0.330033	192	61	24.1107
PCDH10	0	genome.wustl.edu	37	4	134072881	134072881	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	134072881	134072881	G	A	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	missense	c.1586	p.R529H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650				129	0	0	98	31	24.031
NAA15	0	genome.wustl.edu	37	4	140275179	140275179	+	Splice_Site	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	140275179	140275179	G	T	SNP	NAA15	ENST00000296543	human	ensembl	74_37	+1	known	splice_site	c.1015-1	e10-1	1.000	-	-	-	no_errors	NAA15	HGNC	ENSG00000164134				170	0	0	131	41	23.8372
ARHGAP10	0	genome.wustl.edu	37	4	148984398	148984398	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	148984398	148984398	G	A	SNP	ARHGAP10	ENST00000336498	human	ensembl	74_37	+1	known	silent	c.2127	p.S709	0.000	superfamily_SH3_domain	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_RhoGAP_dom,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP10	HGNC	ENSG00000071205				100	0	0	79	20	20.202
DCLK2	0	genome.wustl.edu	37	4	151169505	151169505	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	151169505	151169505	G	A	SNP	DCLK2	ENST00000302176	human	ensembl	74_37	+1	known	missense	c.1975	p.A659T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK2	HGNC	ENSG00000170390				122	0	0	145	8	5.22876
TIGD4	0	genome.wustl.edu	37	4	153691221	153691221	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	153691221	153691221	A	G	SNP	TIGD4	ENST00000304337	human	ensembl	74_37	-1	known	silent	c.936	p.S312	1.000	pfam_DDE_SF_endonuclease_CENPB-like	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,pfam_Centromere_CenpB_dimerisation,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD4	HGNC	ENSG00000169989				254	0	0	253	27	9.64286
ZNF718	0	genome.wustl.edu	37	4	155880	155880	+	RNA	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	155880	155880	C	A	SNP	ZNF718	ENST00000400172	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.347	-	-	-	no_errors	ZNF718	HGNC	ENSG00000250312				32	0	0	23	6	20.6897
GRIA2	0	genome.wustl.edu	37	4	158224771	158224771	+	Silent	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	158224771	158224771	C	A	SNP	GRIA2	ENST00000264426	human	ensembl	74_37	+1	known	silent	c.297	p.T99	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA2	HGNC	ENSG00000120251				241	0	0	231	17	6.85484
LDB2	0	genome.wustl.edu	37	4	16900030	16900030	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	16900030	16900030	G	A	SNP	LDB2	ENST00000304523	human	ensembl	74_37	-1	known	nonsense	c.79	p.Q27*	1.000	NULL	NULL	-	no_errors	LDB2	HGNC	ENSG00000169744				155	0	0	154	10	6.09756
PRIMPOL	0	genome.wustl.edu	37	4	185599425	185599425	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	185599425	185599425	C	A	SNP	PRIMPOL	ENST00000314970	human	ensembl	74_37	+1	known	nonsense	c.884	p.S295*	1.000	pfam_DNA_primase_S	pfam_DNA_primase_UL52/UL70_Herpvir,pfam_DNA_primase_S	-	no_errors	PRIMPOL	HGNC	ENSG00000164306				53	0	0	45	11	19.6429
WHSC1	0	genome.wustl.edu	37	4	1962797	1962797	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	1962797	1962797	C	T	SNP	WHSC1	ENST00000382891	human	ensembl	74_37	+1	known	silent	c.3291	p.I1097	0.144	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_box_dom,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_PWWP_dom,smart_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_box_dom	-	no_errors	WHSC1	HGNC	ENSG00000109685				192	0	0	161	43	21.0784
SLIT2	0	genome.wustl.edu	37	4	20620460	20620460	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	20620460	20620460	C	G	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.4418	p.T1473R	0.992	smart_Cys_knot_C,pfscan_Cys_knot_C	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				108	0	0	88	23	20.7207
GPR125	0	genome.wustl.edu	37	4	22415322	22415322	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	22415322	22415322	C	T	SNP	GPR125	ENST00000334304	human	ensembl	74_37	-1	known	missense	c.1925	p.R642H	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_GPCR_2_extracellular_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR125	HGNC	ENSG00000152990				111	1	0.892857	112	29	20.5674
PPARGC1A	0	genome.wustl.edu	37	4	23830129	23830129	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	23830129	23830129	G	A	SNP	PPARGC1A	ENST00000264867	human	ensembl	74_37	-1	known	silent	c.651	p.N217	0.991	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPARGC1A	HGNC	ENSG00000109819				381	0	0	270	72	21.0526
ADD1	0	genome.wustl.edu	37	4	2899982	2899982	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	2899982	2899982	T	C	SNP	ADD1	ENST00000264758	human	ensembl	74_37	+1	known	silent	c.813	p.H271	0.991	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD1	HGNC	ENSG00000087274				149	0	0	142	9	5.96026
FAM114A1	0	genome.wustl.edu	37	4	38910256	38910256	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	38910256	38910256	T	C	SNP	FAM114A1	ENST00000358869	human	ensembl	74_37	+1	known	missense	c.701	p.I234T	1.000	pfam_DUF719	pfam_DUF719	-	no_errors	FAM114A1	HGNC	ENSG00000197712				119	0	0	81	18	18.1818
FAM114A1	0	genome.wustl.edu	37	4	38910296	38910296	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	38910296	38910296	G	A	SNP	FAM114A1	ENST00000358869	human	ensembl	74_37	+1	known	silent	c.741	p.P247	0.347	pfam_DUF719	pfam_DUF719	-	no_errors	FAM114A1	HGNC	ENSG00000197712				114	0	0	94	6	6
KLHL5	0	genome.wustl.edu	37	4	39104951	39104951	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	39104951	39104951	A	G	SNP	KLHL5	ENST00000359687	human	ensembl	74_37	+1	known	missense	c.1483	p.T495A	1.000	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL5	HGNC	ENSG00000109790				56	0	0	52	7	11.8644
UGDH	0	genome.wustl.edu	37	4	39512462	39512462	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	39512462	39512462	G	T	SNP	UGDH	ENST00000316423	human	ensembl	74_37	-1	known	missense	c.284	p.T95N	1.000	pfam_UDP-Glc/GDP-Man_DH_N,tigrfam_UDP-Glc/GDP-Man	pfam_UDP-Glc/GDP-Man_DH_N,pfam_UDP-Glc/GDP-Man_DH_C,pfam_UDP-Glc/GDP-Man_DH_dimer,superfamily_UDP-Glc/GDP-Man_DH_C,superfamily_6-PGluconate_DH_C-like,tigrfam_UDP-Glc/GDP-Man	-	no_errors	UGDH	HGNC	ENSG00000109814				209	0	0	150	41	21.466
LIMCH1	0	genome.wustl.edu	37	4	41691639	41691639	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	41691639	41691639	T	C	SNP	LIMCH1	ENST00000503057	human	ensembl	74_37	+1	known	missense	c.4262	p.I1421T	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LIMCH1	HGNC	ENSG00000064042				175	0	0	142	27	15.9763
DCAF4L1	0	genome.wustl.edu	37	4	41984149	41984149	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	41984149	41984149	G	T	SNP	DCAF4L1	ENST00000333141	human	ensembl	74_37	+1	known	missense	c.340	p.V114L	0.980	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L1	HGNC	ENSG00000182308				140	0	0	112	25	18.2482
KCTD8	0	genome.wustl.edu	37	4	44450166	44450166	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	44450166	44450166	G	A	SNP	KCTD8	ENST00000360029	human	ensembl	74_37	-1	known	silent	c.375	p.P125	0.909	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD8	HGNC	ENSG00000183783				26	0	0	26	5	16.129
FIP1L1	0	genome.wustl.edu	37	4	54244047	54244047	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	54244047	54244047	C	T	SNP	FIP1L1	ENST00000337488	human	ensembl	74_37	+1	known	silent	c.42	p.S14	1.000	NULL	pfam_Fip1	-	no_errors	FIP1L1	HGNC	ENSG00000145216				9	0	0	12	5	29.4118
GSX2	0	genome.wustl.edu	37	4	54967794	54967794	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	54967794	54967794	C	T	SNP	GSX2	ENST00000326902	human	ensembl	74_37	+1	known	missense	c.620	p.T207M	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	GSX2	HGNC	ENSG00000180613				115	0	0	107	21	16.4062
KIT	0	genome.wustl.edu	37	4	55569973	55569973	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	55569973	55569973	G	A	SNP	KIT	ENST00000288135	human	ensembl	74_37	+1	known	silent	c.840	p.A280	0.794	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	KIT	HGNC	ENSG00000157404				256	0	0	192	49	20.332
EVC	0	genome.wustl.edu	37	4	5785435	5785435	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	5785435	5785435	C	T	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	missense	c.1720	p.R574C	0.983	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840				63	0	0	49	18	26.8657
EVC	0	genome.wustl.edu	37	4	5806514	5806514	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	5806514	5806514	C	T	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	missense	c.2507	p.S836L	0.000	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840				76	0	0	67	12	15.1899
C4orf50	0	genome.wustl.edu	37	4	5982061	5982061	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	5982061	5982061	C	T	SNP	C4orf50	ENST00000531445	human	ensembl	74_37	-1	known	missense	c.1430	p.R477Q	0.008	NULL	NULL	-	no_errors	C4orf50	HGNC	ENSG00000181215				32	0	0	17	5	22.7273
MRFAP1L1	0	genome.wustl.edu	37	4	6711156	6711156	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	6711156	6711156	G	C	SNP	MRFAP1L1	ENST00000320848	human	ensembl	74_37	-1	known	missense	c.201	p.I67M	0.297	NULL	NULL	-	no_errors	MRFAP1L1	HGNC	ENSG00000178988				164	0	0	162	29	15.1832
KIAA0232	0	genome.wustl.edu	37	4	6864819	6864819	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	6864819	6864819	T	A	SNP	KIAA0232	ENST00000307659	human	ensembl	74_37	+1	known	missense	c.2710	p.S904T	0.756	NULL	NULL	-	no_errors	KIAA0232	HGNC	ENSG00000170871				128	0	0	105	13	11.0169
TMPRSS11A	0	genome.wustl.edu	37	4	68812182	68812182	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	68812182	68812182	T	C	SNP	TMPRSS11A	ENST00000334830	human	ensembl	74_37	-1	known	missense	c.119	p.H40R	0.874	pirsf_Pept_S1A_HAT/DESC1	pfam_Peptidase_S1,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_HAT/DESC1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS11A	HGNC	ENSG00000187054				69	0	0	68	20	22.7273
SULT1E1	0	genome.wustl.edu	37	4	70719960	70719960	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	70719960	70719960	G	A	SNP	SULT1E1	ENST00000226444	human	ensembl	74_37	-1	known	missense	c.344	p.A115V	0.004	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT1E1	HGNC	ENSG00000109193				130	0	0	103	12	10.4348
AMBN	0	genome.wustl.edu	37	4	71472342	71472342	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	71472342	71472342	C	T	SNP	AMBN	ENST00000322937	human	ensembl	74_37	+1	known	silent	c.1239	p.T413	0.000	pfam_Amelin,smart_Amelin	pfam_Amelin,smart_Amelin	-	no_errors	AMBN	HGNC	ENSG00000178522				122	0	0	128	7	5.18519
SLC4A4	0	genome.wustl.edu	37	4	72338444	72338444	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	72338444	72338444	C	T	SNP	SLC4A4	ENST00000425175	human	ensembl	74_37	+1	known	missense	c.1660	p.R554C	1.000	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A4	HGNC	ENSG00000080493				440	0	0	307	74	19.4226
SORCS2	0	genome.wustl.edu	37	4	7666180	7666180	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	7666180	7666180	C	T	SNP	SORCS2	ENST00000507866	human	ensembl	74_37	+1	known	silent	c.1053	p.D351	0.975	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	SORCS2	HGNC	ENSG00000184985				25	0	0	27	4	12.9032
NAAA	0	genome.wustl.edu	37	4	76836121	76836121	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	76836121	76836121	G	A	SNP	NAAA	ENST00000286733	human	ensembl	74_37	-1	known	missense	c.1016	p.T339M	0.997	pirsf_Acid_ceramidase-like	pfam_Chologlycine_hydro,pirsf_Acid_ceramidase-like	-	no_errors	NAAA	HGNC	ENSG00000138744				181	0	0	145	30	17.1429
GK2	0	genome.wustl.edu	37	4	80329115	80329115	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	80329115	80329115	A	G	SNP	GK2	ENST00000358842	human	ensembl	74_37	-1	known	silent	c.240	p.I80	0.991	pfam_Carb_kinase_FGGY_N,tigrfam_Glycerol_kin	pfam_Carb_kinase_FGGY_N,pfam_Carb_kinase_FGGY_C,tigrfam_Glycerol_kin	-	no_errors	GK2	HGNC	ENSG00000196475				356	0	0	276	66	19.2982
PRDM8	0	genome.wustl.edu	37	4	81123201	81123201	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	81123201	81123201	C	T	SNP	PRDM8	ENST00000339711	human	ensembl	74_37	+1	known	silent	c.585	p.G195	0.805	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM8	HGNC	ENSG00000152784				70	0	0	80	21	20.7921
RASGEF1B	0	genome.wustl.edu	37	4	82355838	82355838	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	82355838	82355838	A	G	SNP	RASGEF1B	ENST00000264400	human	ensembl	74_37	-1	known	silent	c.1155	p.N385	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGEF1B	HGNC	ENSG00000138670				61	0	0	34	13	27.6596
ACOX3	0	genome.wustl.edu	37	4	8411994	8411994	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	8411994	8411994	G	A	SNP	ACOX3	ENST00000356406	human	ensembl	74_37	-1	known	missense	c.632	p.A211V	0.999	pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_AcylCo_DH/oxidase_C,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX3	HGNC	ENSG00000087008				94	0	0	78	29	27.1028
WDFY3	0	genome.wustl.edu	37	4	85609395	85609395	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	85609395	85609395	G	A	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	silent	c.9387	p.T3129	0.648	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625				91	0	0	99	22	18.1818
WDFY3	0	genome.wustl.edu	37	4	85722917	85722917	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	85722917	85722917	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.2708	p.R903Q	0.991	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625				133	0	0	92	29	23.9669
C4orf36	0	genome.wustl.edu	37	4	87808959	87808959	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	87808959	87808959	A	G	SNP	C4orf36	ENST00000295898	human	ensembl	74_37	-1	known	missense	c.308	p.L103P	0.206	NULL	NULL	-	no_errors	C4orf36	HGNC	ENSG00000163633				117	0	0	91	24	20.8696
AFF1	0	genome.wustl.edu	37	4	87968255	87968255	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	87968255	87968255	G	T	SNP	AFF1	ENST00000395146	human	ensembl	74_37	+1	known	nonsense	c.568	p.G190*	0.020	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF1	HGNC	ENSG00000172493				204	0	0	137	39	22.1591
DSPP	0	genome.wustl.edu	37	4	88533595	88533595	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	88533595	88533595	C	A	SNP	DSPP	ENST00000282478	human	ensembl	74_37	+1	known	missense	c.257	p.A86E	0.166	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591				52	0	0	37	7	15.9091
MMRN1	0	genome.wustl.edu	37	4	90830464	90830464	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	90830464	90830464	A	G	SNP	MMRN1	ENST00000264790	human	ensembl	74_37	+1	known	missense	c.661	p.T221A	0.961	pfam_EMI_domain,pfscan_EMI_domain	pfam_C1q,pfam_EMI_domain,pfam_EG-like_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MMRN1	HGNC	ENSG00000138722				176	1	0.564972	130	25	16.129
SMARCAD1	0	genome.wustl.edu	37	4	95199819	95199819	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	95199819	95199819	C	T	SNP	SMARCAD1	ENST00000359052	human	ensembl	74_37	+1	known	missense	c.2231	p.S744L	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_UBA-like,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_CUE,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAD1	HGNC	ENSG00000163104				226	0	0	175	37	17.4528
METAP1	0	genome.wustl.edu	37	4	99962266	99962266	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	99962266	99962266	G	A	SNP	METAP1	ENST00000296411	human	ensembl	74_37	+1	known	missense	c.505	p.A169T	1.000	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,tigrfam_Pept_M24A_MAP1	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP1	-	no_errors	METAP1	HGNC	ENSG00000164024				45	0	0	28	6	17.6471
CCT5	0	genome.wustl.edu	37	5	10264815	10264815	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	10264815	10264815	C	T	SNP	CCT5	ENST00000280326	human	ensembl	74_37	+1	known	nonsense	c.1546	p.Q516*	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_epsi	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_epsi	-	no_errors	CCT5	HGNC	ENSG00000150753				262	0	0	211	49	18.8462
TSLP	0	genome.wustl.edu	37	5	110409325	110409325	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	110409325	110409325	A	G	SNP	TSLP	ENST00000344895	human	ensembl	74_37	+1	known	silent	c.333	p.P111	0.038	NULL	NULL	-	no_errors	TSLP	HGNC	ENSG00000145777				166	0	0	142	22	13.4146
FAM170A	0	genome.wustl.edu	37	5	118970280	118970280	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	118970280	118970280	G	A	SNP	FAM170A	ENST00000515256	human	ensembl	74_37	+1	known	silent	c.837	p.E279	0.274	NULL	NULL	-	no_errors	FAM170A	HGNC	ENSG00000164334				201	0	0	181	51	21.9828
SRFBP1	0	genome.wustl.edu	37	5	121309939	121309939	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	121309939	121309939	C	T	SNP	SRFBP1	ENST00000339397	human	ensembl	74_37	+1	known	nonsense	c.85	p.R29*	1.000	NULL	pfam_Bud-site_select_BUD22	-	no_errors	SRFBP1	HGNC	ENSG00000151304				96	0	0	55	8	12.6984
ZNF474	0	genome.wustl.edu	37	5	121488306	121488306	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	121488306	121488306	C	T	SNP	ZNF474	ENST00000296600	human	ensembl	74_37	+1	known	silent	c.621	p.G207	0.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF474	HGNC	ENSG00000164185				124	0	0	99	16	13.913
FBN2	0	genome.wustl.edu	37	5	127728848	127728848	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	127728848	127728848	C	T	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	missense	c.1445	p.G482E	1.000	pirsf_FBN	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829				157	0	0	144	28	16.2791
SLC22A5	0	genome.wustl.edu	37	5	131726528	131726528	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	131726528	131726528	G	A	SNP	SLC22A5	ENST00000435065	human	ensembl	74_37	+1	known	missense	c.1271	p.R424H	0.997	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A5	HGNC	ENSG00000197375				105	0	0	97	22	18.4874
PHF15	0	genome.wustl.edu	37	5	133914938	133914938	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	133914938	133914938	T	C	SNP	PHF15	ENST00000395003	human	ensembl	74_37	+1	known	silent	c.2304	p.G768	0.224	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF15	HGNC	ENSG00000043143				49	0	0	51	18	26.087
PITX1	0	genome.wustl.edu	37	5	134364597	134364597	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	134364597	134364597	C	T	SNP	PITX1	ENST00000265340	human	ensembl	74_37	-1	known	missense	c.817	p.V273I	1.000	pirsf_Homeobox_Pitx/unc30	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PITX1	HGNC	ENSG00000069011				38	0	0	24	6	20
KDM3B	0	genome.wustl.edu	37	5	137715371	137715371	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	137715371	137715371	C	T	SNP	KDM3B	ENST00000314358	human	ensembl	74_37	+1	known	missense	c.679	p.R227C	0.997	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC	ENSG00000120733				152	0	0	124	27	17.8808
DNAH5	0	genome.wustl.edu	37	5	13786321	13786321	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	13786321	13786321	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	silent	c.8787	p.V2929	0.999	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				80	0	0	55	14	20.2899
PSD2	0	genome.wustl.edu	37	5	139193918	139193918	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	139193918	139193918	C	T	SNP	PSD2	ENST00000274710	human	ensembl	74_37	+1	known	missense	c.985	p.R329C	1.000	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD2	HGNC	ENSG00000146005				48	0	0	56	9	13.8462
PCDHA4	0	genome.wustl.edu	37	5	140186806	140186806	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140186806	140186806	C	T	SNP	PCDHA4	ENST00000530339	human	ensembl	74_37	+1	known	missense	c.34	p.R12W	0.001	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA4	HGNC	ENSG00000204967				213	0	0	168	40	19.2308
PCDHA6	0	genome.wustl.edu	37	5	140207942	140207942	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140207942	140207942	G	A	SNP	PCDHA6	ENST00000529310	human	ensembl	74_37	+1	known	missense	c.266	p.R89Q	0.360	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA6	HGNC	ENSG00000081842				341	0	0	268	72	21.1765
PCDHA6	0	genome.wustl.edu	37	5	140208825	140208825	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140208825	140208825	G	A	SNP	PCDHA6	ENST00000529310	human	ensembl	74_37	+1	known	silent	c.1149	p.G383	0.748	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA6	HGNC	ENSG00000081842				352	0	0	273	75	21.5517
PCDHA7	0	genome.wustl.edu	37	5	140215089	140215089	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140215089	140215089	T	C	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	missense	c.1121	p.V374A	0.540	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963				224	0	0	188	39	17.1806
PCDHA11	0	genome.wustl.edu	37	5	140248987	140248987	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140248987	140248987	C	T	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	missense	c.299	p.A100V	0.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158				327	0	0	328	18	5.20231
PCDHA11	0	genome.wustl.edu	37	5	140249919	140249919	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140249919	140249919	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	missense	c.1231	p.A411T	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158				201	0	0	154	41	21.0256
PCDHAC1	0	genome.wustl.edu	37	5	140306856	140306856	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140306856	140306856	G	A	SNP	PCDHAC1	ENST00000253807	human	ensembl	74_37	+1	known	missense	c.379	p.G127S	0.001	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC1	HGNC	ENSG00000248383				77	0	0	63	18	22.2222
PCDHAC2	0	genome.wustl.edu	37	5	140347356	140347356	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140347356	140347356	G	A	SNP	PCDHAC2	ENST00000289269	human	ensembl	74_37	+1	known	silent	c.1005	p.V335	0.984	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC2	HGNC	ENSG00000243232				48	0	0	53	14	20.8955
PCDHB5	0	genome.wustl.edu	37	5	140517107	140517107	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140517107	140517107	G	A	SNP	PCDHB5	ENST00000231134	human	ensembl	74_37	+1	known	silent	c.2091	p.S697	0.001	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB5	HGNC	ENSG00000113209				202	0	0	172	50	22.5225
PCDHB6	0	genome.wustl.edu	37	5	140531423	140531423	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140531423	140531423	G	A	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.1585	p.V529M	0.919	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				104	0	0	90	31	25.6198
PCDHB6	0	genome.wustl.edu	37	5	140531506	140531506	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140531506	140531506	G	A	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	silent	c.1668	p.S556	0.930	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				82	0	0	73	20	21.5054
ENSG00000255622	0	genome.wustl.edu	37	5	140537175	140537175	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140537175	140537175	C	T	SNP	ENSG00000255622	ENST00000539533	human	ensembl	74_37	+1	known	silent	c.1599	p.G533	0.494	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB17	Uniprot_gn	ENSG00000255622				65	0	0	66	21	24.1379
PCDHB8	0	genome.wustl.edu	37	5	140559225	140559225	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140559225	140559225	G	A	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	missense	c.1610	p.R537H	0.011	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322				192	0	0	198	32	13.913
PCDHB12	0	genome.wustl.edu	37	5	140589745	140589745	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140589745	140589745	C	T	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	silent	c.1266	p.T422	0.005	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328				101	0	0	110	8	6.77966
PCDHB14	0	genome.wustl.edu	37	5	140605165	140605165	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140605165	140605165	G	A	SNP	PCDHB14	ENST00000239449	human	ensembl	74_37	+1	known	silent	c.2088	p.S696	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB14	HGNC	ENSG00000120327				206	1	0.483092	179	45	20.0893
PCDHGB2	0	genome.wustl.edu	37	5	140740782	140740782	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140740782	140740782	G	A	SNP	PCDHGB2	ENST00000522605	human	ensembl	74_37	+1	known	silent	c.1080	p.S360	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB2	HGNC	ENSG00000253910				138	0	0	95	17	15.1786
PCDHGA8	0	genome.wustl.edu	37	5	140772638	140772638	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140772638	140772638	C	T	SNP	PCDHGA8	ENST00000398604	human	ensembl	74_37	+1	known	silent	c.258	p.T86	0.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA8	HGNC	ENSG00000253767				68	0	0	60	4	6.25
PCDHGA10	0	genome.wustl.edu	37	5	140793360	140793360	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140793360	140793360	C	T	SNP	PCDHGA10	ENST00000398610	human	ensembl	74_37	+1	known	silent	c.618	p.R206	0.003	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA10	HGNC	ENSG00000253846				93	0	0	86	5	5.49451
PCDHGB7	0	genome.wustl.edu	37	5	140798770	140798770	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	140798770	140798770	C	T	SNP	PCDHGB7	ENST00000398594	human	ensembl	74_37	+1	known	silent	c.1344	p.N448	0.969	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB7	HGNC	ENSG00000254122				93	0	0	70	18	20.4545
HDAC3	0	genome.wustl.edu	37	5	141014481	141014481	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	141014481	141014481	G	A	SNP	HDAC3	ENST00000305264	human	ensembl	74_37	-1	known	missense	c.178	p.R60C	1.000	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC3	HGNC	ENSG00000171720				157	0	0	148	25	14.4509
ARAP3	0	genome.wustl.edu	37	5	141033493	141033493	+	RNA	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	141033493	141033493	C	A	SNP	ARAP3	ENST00000512390	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARAP3	HGNC	ENSG00000120318				119	0	0	118	26	18.0556
ARAP3	0	genome.wustl.edu	37	5	141051787	141051787	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	141051787	141051787	G	A	SNP	ARAP3	ENST00000239440	human	ensembl	74_37	-1	known	silent	c.1467	p.Y489	1.000	smart_ArfGAP,pfscan_ArfGAP	pfam_RhoGAP_dom,pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ras-assoc,pfam_SAM_2,pfam_SAM_type1,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP3	HGNC	ENSG00000120318				224	0	0	222	15	6.32911
SPRY4	0	genome.wustl.edu	37	5	141694062	141694062	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	141694062	141694062	C	A	SNP	SPRY4	ENST00000344120	human	ensembl	74_37	-1	known	missense	c.681	p.Q227H	1.000	pfam_Sprouty	pfam_Sprouty	-	no_errors	SPRY4	HGNC	ENSG00000187678				68	0	0	71	22	23.6559
DPYSL3	0	genome.wustl.edu	37	5	146781177	146781177	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	146781177	146781177	C	T	SNP	DPYSL3	ENST00000398514	human	ensembl	74_37	-1	known	silent	c.894	p.A298	0.025	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL3	HGNC	ENSG00000113657				39	0	0	30	16	34.7826
FBXO38	0	genome.wustl.edu	37	5	147805103	147805103	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	147805103	147805103	G	A	SNP	FBXO38	ENST00000340253	human	ensembl	74_37	+1	known	missense	c.1757	p.R586H	1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO38	HGNC	ENSG00000145868				173	0	0	120	25	17.2414
SH3TC2	0	genome.wustl.edu	37	5	148406585	148406585	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	148406585	148406585	G	A	SNP	SH3TC2	ENST00000515425	human	ensembl	74_37	-1	known	nonsense	c.2710	p.R904*	0.430	NULL	pfam_SH3_domain,pfam_TPR_1,superfamily_SH3_domain,smart_SH3_domain,smart_TPR_repeat,pfscan_SH3_domain	-	no_errors	SH3TC2	HGNC	ENSG00000169247				323	0	0	251	75	23.0061
ARHGEF37	0	genome.wustl.edu	37	5	149006814	149006814	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	149006814	149006814	G	A	SNP	ARHGEF37	ENST00000333677	human	ensembl	74_37	+1	known	missense	c.1640	p.R547H	0.996	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain	pfam_DH-domain,pfam_BAR_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF37	HGNC	ENSG00000183111				129	0	0	107	29	21.3235
CSF1R	0	genome.wustl.edu	37	5	149453020	149453020	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	149453020	149453020	A	G	SNP	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	missense	c.926	p.L309P	0.953	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,smart_Ig_sub	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578				220	0	0	189	55	22.541
ARSI	0	genome.wustl.edu	37	5	149677808	149677808	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	149677808	149677808	G	A	SNP	ARSI	ENST00000328668	human	ensembl	74_37	-1	known	missense	c.679	p.R227C	0.886	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSI	HGNC	ENSG00000183876				49	0	0	40	10	20
GRIA1	0	genome.wustl.edu	37	5	152873596	152873596	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	152873596	152873596	T	C	SNP	GRIA1	ENST00000448073	human	ensembl	74_37	+1	known	missense	c.221	p.I74T	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511				144	1	0.689655	152	14	8.43373
GRIA1	0	genome.wustl.edu	37	5	153085355	153085355	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	153085355	153085355	G	A	SNP	GRIA1	ENST00000448073	human	ensembl	74_37	+1	known	missense	c.1581	p.M527I	1.000	pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511				290	0	0	199	49	19.7581
GRIA1	0	genome.wustl.edu	37	5	153144175	153144175	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	153144175	153144175	A	G	SNP	GRIA1	ENST00000448073	human	ensembl	74_37	+1	known	missense	c.2035	p.T679A	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511				75	0	0	44	6	12
KIF4B	0	genome.wustl.edu	37	5	154396385	154396385	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	154396385	154396385	T	C	SNP	KIF4B	ENST00000435029	human	ensembl	74_37	+1	known	missense	c.2966	p.I989T	0.230	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4B	HGNC	ENSG00000226650				234	0	0	200	14	6.54206
CLINT1	0	genome.wustl.edu	37	5	157214796	157214796	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	157214796	157214796	A	G	SNP	CLINT1	ENST00000296951	human	ensembl	74_37	-1	known	missense	c.1736	p.M579T	1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	CLINT1	HGNC	ENSG00000113282				225	0	0	187	28	13.0233
TENM2	0	genome.wustl.edu	37	5	167674458	167674458	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	167674458	167674458	A	G	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.6514	p.M2172V	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934				118	0	0	84	30	26.3158
RANBP17	0	genome.wustl.edu	37	5	170632540	170632540	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	170632540	170632540	G	A	SNP	RANBP17	ENST00000523189	human	ensembl	74_37	+1	known	missense	c.2155	p.G719R	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC	ENSG00000204764				99	0	0	73	23	23.9583
BASP1	0	genome.wustl.edu	37	5	17275415	17275415	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	17275415	17275415	G	A	SNP	BASP1	ENST00000322611	human	ensembl	74_37	+1	known	silent	c.90	p.A30	0.019	pfam_BASP1	pfam_BASP1	-	no_errors	BASP1	HGNC	ENSG00000176788				25	0	0	34	13	27.6596
N4BP3	0	genome.wustl.edu	37	5	177548793	177548793	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	177548793	177548793	C	T	SNP	N4BP3	ENST00000274605	human	ensembl	74_37	+1	known	nonsense	c.1426	p.R476*	1.000	NULL	NULL	-	no_errors	N4BP3	HGNC	ENSG00000145911				17	0	0	14	3	17.6471
GRM6	0	genome.wustl.edu	37	5	178408747	178408747	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	178408747	178408747	G	A	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	nonsense	c.2545	p.Q849*	1.000	pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262				189	0	0	158	34	17.7083
MAML1	0	genome.wustl.edu	37	5	179201712	179201712	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	179201712	179201712	C	A	SNP	MAML1	ENST00000292599	human	ensembl	74_37	+1	known	missense	c.2885	p.P962H	0.983	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML1	HGNC	ENSG00000161021				54	0	0	54	15	21.7391
CNOT6	0	genome.wustl.edu	37	5	179991555	179991555	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	179991555	179991555	A	G	SNP	CNOT6	ENST00000261951	human	ensembl	74_37	+1	known	missense	c.452	p.N151S	1.000	NULL	pfam_Endo/exonuclease/phosphatase,pfam_Leu-rich_rpt,superfamily_Endo/exonuclease/phosphatase,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	CNOT6	HGNC	ENSG00000113300				240	1	0.414938	168	32	16
IRX4	0	genome.wustl.edu	37	5	1879766	1879766	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	1879766	1879766	C	T	SNP	IRX4	ENST00000231357	human	ensembl	74_37	-1	known	silent	c.588	p.A196	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX4	HGNC	ENSG00000113430				84	0	0	96	26	21.3115
CDH18	0	genome.wustl.edu	37	5	19591227	19591227	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	19591227	19591227	A	G	SNP	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	missense	c.938	p.M313T	0.463	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526				205	0	0	144	29	16.763
CDH12	0	genome.wustl.edu	37	5	21842351	21842351	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	21842351	21842351	G	A	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	nonsense	c.733	p.Q245*	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162				222	0	0	200	47	19.0283
DROSHA	0	genome.wustl.edu	37	5	31526774	31526774	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	31526774	31526774	G	A	SNP	DROSHA	ENST00000344624	human	ensembl	74_37	-1	known	missense	c.266	p.A89V	0.687	NULL	pfam_RNase_III_dom,pfam_dsRNA-bd_dom,superfamily_RNase_III_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DROSHA	HGNC	ENSG00000113360				35	0	0	21	13	38.2353
PDZD2	0	genome.wustl.edu	37	5	32058117	32058117	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	32058117	32058117	C	T	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.2108	p.A703V	0.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				59	0	0	52	11	17.4603
AMACR	0	genome.wustl.edu	37	5	33989221	33989221	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	33989221	33989221	T	C	SNP	AMACR	ENST00000335606	human	ensembl	74_37	-1	known	missense	c.1126	p.N376D	0.000	NULL	pfam_CoA-Trfase_fam_III,superfamily_CoA-Trfase_III_dom	-	no_errors	AMACR	HGNC	ENSG00000242110				102	0	0	78	23	22.7723
C1QTNF3	0	genome.wustl.edu	37	5	34033499	34033499	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	34033499	34033499	G	A	SNP	C1QTNF3	ENST00000382065	human	ensembl	74_37	-1	known	silent	c.480	p.G160	1.000	pfam_Collagen	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF3	HGNC	ENSG00000082196				160	0	0	124	58	31.8681
NIPBL	0	genome.wustl.edu	37	5	37000602	37000602	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	37000602	37000602	T	C	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	silent	c.3432	p.G1144	0.999	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				175	0	0	128	25	16.3399
GDNF	0	genome.wustl.edu	37	5	37815867	37815867	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	37815867	37815867	T	C	SNP	GDNF	ENST00000326524	human	ensembl	74_37	-1	known	silent	c.522	p.V174	0.614	pfam_TGF-b_C,smart_TGF-b_C,pirsf_GDNF	pfam_TGF-b_C,smart_TGF-b_C,pirsf_GDNF	-	no_errors	GDNF	HGNC	ENSG00000168621				267	0	0	239	13	5.15873
C6	0	genome.wustl.edu	37	5	41149542	41149542	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	41149542	41149542	G	A	SNP	C6	ENST00000263413	human	ensembl	74_37	-1	known	silent	c.2424	p.N808	0.000	pfam_Kazal_dom,smart_FacI_MAC	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_Thrombospondin_1_rpt,pfam_LDrepeatLR_classA_rpt,pfam_Kazal_dom,superfamily_Sushi_SCR_CCP,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,prints_MAC_perforin,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt	-	no_errors	C6	HGNC	ENSG00000039537				284	0	0	229	67	22.6351
AHRR	0	genome.wustl.edu	37	5	424025	424025	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	424025	424025	C	T	SNP	AHRR	ENST00000316418	human	ensembl	74_37	+1	known	missense	c.653	p.S218L	0.957	NULL	pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	AHRR	HGNC	ENSG00000063438				52	0	0	76	12	13.6364
GPBP1	0	genome.wustl.edu	37	5	56527097	56527097	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	56527097	56527097	C	T	SNP	GPBP1	ENST00000424459	human	ensembl	74_37	+1	known	silent	c.360	p.T120	0.002	NULL	NULL	-	no_errors	GPBP1	HGNC	ENSG00000062194				65	0	0	52	13	20
GPBP1	0	genome.wustl.edu	37	5	56546783	56546783	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	56546783	56546783	T	C	SNP	GPBP1	ENST00000424459	human	ensembl	74_37	+1	known	silent	c.1035	p.D345	1.000	NULL	NULL	-	no_errors	GPBP1	HGNC	ENSG00000062194				124	0	0	81	19	19
HTR1A	0	genome.wustl.edu	37	5	63256803	63256803	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	63256803	63256803	C	T	SNP	HTR1A	ENST00000323865	human	ensembl	74_37	-1	known	silent	c.744	p.P248	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT1A_rcpt,prints_GPCR_Rhodpsn,prints_5HT_rcpt,prints_NPY_rcpt	-	no_errors	HTR1A	HGNC	ENSG00000178394				130	0	0	125	19	13.1944
TRIM23	0	genome.wustl.edu	37	5	64910016	64910016	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	64910016	64910016	T	A	SNP	TRIM23	ENST00000231524	human	ensembl	74_37	-1	known	missense	c.275	p.N92I	1.000	NULL	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_MIRO-like,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,pfam_Znf_B-box,superfamily_P-loop_NTPase,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,smart_Small_GTPase_Rab_type,pfscan_Znf_B-box,pfscan_Znf_RING,pfscan_Znf_C2H2,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	TRIM23	HGNC	ENSG00000113595				236	1	0.421941	191	31	13.964
ERBB2IP	0	genome.wustl.edu	37	5	65320250	65320250	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	65320250	65320250	T	G	SNP	ERBB2IP	ENST00000284037	human	ensembl	74_37	+1	known	missense	c.789	p.N263K	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	ERBB2IP	HGNC	ENSG00000112851				190	0	0	140	12	7.89474
MAP1B	0	genome.wustl.edu	37	5	71491093	71491093	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	71491093	71491093	G	A	SNP	MAP1B	ENST00000296755	human	ensembl	74_37	+1	known	silent	c.1911	p.T637	0.000	NULL	pfam_MAP1B_neuraxin	-	no_errors	MAP1B	HGNC	ENSG00000131711				46	0	0	38	10	20.8333
ARHGEF28	0	genome.wustl.edu	37	5	73163798	73163798	+	Silent	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	73163798	73163798	A	T	SNP	ARHGEF28	ENST00000545377	human	ensembl	74_37	+1	known	silent	c.2250	p.G750	0.000	NULL	pfam_DH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF28	HGNC	ENSG00000214944				94	0	0	54	10	15.625
AGGF1	0	genome.wustl.edu	37	5	76344774	76344774	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	76344774	76344774	G	C	SNP	AGGF1	ENST00000312916	human	ensembl	74_37	+1	known	missense	c.1327	p.E443Q	1.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	pfam_FHA_dom,pfam_G_patch_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_G_patch_dom,pfscan_FHA_dom,pfscan_G_patch_dom	-	no_errors	AGGF1	HGNC	ENSG00000164252				211	0	0	149	45	23.1959
SCAMP1	0	genome.wustl.edu	37	5	77717683	77717683	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	77717683	77717683	T	C	SNP	SCAMP1	ENST00000538629	human	ensembl	74_37	+1	known	silent	c.531	p.D177	0.045	pfam_SCAMP	pfam_SCAMP	-	no_errors	SCAMP1	HGNC	ENSG00000085365				337	0	0	271	48	15.047
CMYA5	0	genome.wustl.edu	37	5	79031505	79031505	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	79031505	79031505	T	C	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	missense	c.6917	p.V2306A	0.001	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309				170	0	0	123	24	16.3265
XRCC4	0	genome.wustl.edu	37	5	82400785	82400785	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	82400785	82400785	T	A	SNP	XRCC4	ENST00000338635	human	ensembl	74_37	+1	known	missense	c.47	p.I16K	0.002	pfam_DNA_repair_prot_XRCC4,superfamily_XRCC4_N	pfam_DNA_repair_prot_XRCC4,superfamily_XRCC4_N	-	no_errors	XRCC4	HGNC	ENSG00000152422				215	0	0	188	13	6.46766
EDIL3	0	genome.wustl.edu	37	5	83360539	83360539	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	83360539	83360539	A	C	SNP	EDIL3	ENST00000296591	human	ensembl	74_37	-1	known	missense	c.932	p.L311R	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC	ENSG00000164176				122	0	0	99	27	21.4286
TRIP13	0	genome.wustl.edu	37	5	908507	908507	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	908507	908507	C	T	SNP	TRIP13	ENST00000166345	human	ensembl	74_37	+1	known	missense	c.797	p.A266V	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_ClpA/B	-	no_errors	TRIP13	HGNC	ENSG00000071539				90	0	0	113	6	5.04202
FAM172A	0	genome.wustl.edu	37	5	93386492	93386492	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	93386492	93386492	T	G	SNP	FAM172A	ENST00000395965	human	ensembl	74_37	-1	known	missense	c.253	p.N85H	1.000	pfam_Arb2_domain	pfam_Arb2_domain	-	no_errors	FAM172A	HGNC	ENSG00000113391				264	0	0	254	41	13.8983
SIM1	0	genome.wustl.edu	37	6	100838484	100838484	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	100838484	100838484	T	C	SNP	SIM1	ENST00000262901	human	ensembl	74_37	-1	known	missense	c.2054	p.H685R	1.000	NULL	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	SIM1	HGNC	ENSG00000112246				208	0	0	148	33	18.232
MAK	0	genome.wustl.edu	37	6	10796519	10796519	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	10796519	10796519	T	G	SNP	MAK	ENST00000313243	human	ensembl	74_37	-1	known	missense	c.855	p.Q285H	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAK	HGNC	ENSG00000111837				154	0	0	89	30	25.2101
SEC63	0	genome.wustl.edu	37	6	108222672	108222672	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	108222672	108222672	C	T	SNP	SEC63	ENST00000369002	human	ensembl	74_37	-1	known	missense	c.1259	p.R420H	1.000	pfam_Sec63-dom,superfamily_ARM-type_fold,smart_Sec63-dom	pfam_Sec63-dom,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_ARM-type_fold,smart_DnaJ_domain,smart_Sec63-dom,prints_DnaJ_domain,pfscan_DnaJ_domain	-	no_errors	SEC63	HGNC	ENSG00000025796				117	0	0	90	13	12.6214
FOXO3	0	genome.wustl.edu	37	6	108985139	108985139	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	108985139	108985139	G	A	SNP	FOXO3	ENST00000343882	human	ensembl	74_37	+1	known	missense	c.1103	p.R368Q	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXO3	HGNC	ENSG00000118689				89	0	0	65	10	13.3333
ARMC2	0	genome.wustl.edu	37	6	109294701	109294701	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	109294701	109294701	C	A	SNP	ARMC2	ENST00000392644	human	ensembl	74_37	+1	known	missense	c.2588	p.P863H	0.282	NULL	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ARMC2	HGNC	ENSG00000118690				249	1	0.4	231	41	15.0735
RWDD1	0	genome.wustl.edu	37	6	116892728	116892728	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	116892728	116892728	G	A	SNP	RWDD1	ENST00000517800	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RWDD1	HGNC	ENSG00000111832				38	0	0	40	6	13.0435
GJA1	0	genome.wustl.edu	37	6	121768103	121768103	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	121768103	121768103	T	C	SNP	GJA1	ENST00000282561	human	ensembl	74_37	+1	known	missense	c.110	p.L37P	1.000	pfam_Connexin_N,prints_Connexin	pfam_Connexin_N,pfam_Connexin_CCC,pfam_Connexin43_C,smart_Connexin_N,prints_Connexin,prints_Connexin43	-	no_errors	GJA1	HGNC	ENSG00000152661				176	0	0	125	19	13.1944
PTPRK	0	genome.wustl.edu	37	6	128316642	128316642	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	128316642	128316642	G	A	SNP	PTPRK	ENST00000368227	human	ensembl	74_37	-1	known	missense	c.2845	p.P949S	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRK	HGNC	ENSG00000152894				68	0	0	70	9	11.3924
LAMA2	0	genome.wustl.edu	37	6	129419458	129419458	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	129419458	129419458	T	C	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	silent	c.537	p.L179	0.937	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569				132	0	0	110	28	20.2899
LAMA2	0	genome.wustl.edu	37	6	129813110	129813110	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	129813110	129813110	A	G	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	missense	c.7963	p.I2655V	0.004	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569				124	0	0	74	24	24.4898
SIRT5	0	genome.wustl.edu	37	6	13584404	13584404	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	13584404	13584404	C	A	SNP	SIRT5	ENST00000606117	human	ensembl	74_37	+1	known	missense	c.62	p.P21H	0.022	NULL	pfam_Sirtuin,pfscan_Ssirtuin_cat_dom	-	no_errors	SIRT5	HGNC	ENSG00000124523				130	0	0	126	35	21.7391
MAP3K5	0	genome.wustl.edu	37	6	136913687	136913687	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	136913687	136913687	A	G	SNP	MAP3K5	ENST00000359015	human	ensembl	74_37	-1	known	missense	c.2944	p.Y982H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442				150	0	0	121	7	5.46875
TNFAIP3	0	genome.wustl.edu	37	6	138201244	138201244	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	138201244	138201244	C	T	SNP	TNFAIP3	ENST00000237289	human	ensembl	74_37	+1	known	missense	c.1943	p.A648V	0.719	NULL	pfam_Znf_A20,pfam_OTU,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	TNFAIP3	HGNC	ENSG00000118503				105	0	0	88	14	13.7255
HECA	0	genome.wustl.edu	37	6	139487945	139487945	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	139487945	139487945	G	A	SNP	HECA	ENST00000367658	human	ensembl	74_37	+1	known	missense	c.796	p.G266S	1.000	NULL	superfamily_Glycoside_hydrolase_SF	-	no_errors	HECA	HGNC	ENSG00000112406				21	0	0	22	5	18.5185
FBXO30	0	genome.wustl.edu	37	6	146126057	146126057	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	146126057	146126057	C	T	SNP	FBXO30	ENST00000237281	human	ensembl	74_37	-1	known	silent	c.1485	p.P495	0.994	NULL	pfam_F-box_dom,superfamily_F-box_dom,superfamily_TRAF-like,pfscan_F-box_dom,pfscan_Znf_TRAF	-	no_errors	FBXO30	HGNC	ENSG00000118496				200	0	0	137	36	20.8092
GRM1	0	genome.wustl.edu	37	6	146480484	146480484	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	146480484	146480484	G	T	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.701	p.G234V	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				153	0	0	137	37	21.2644
CCDC170	0	genome.wustl.edu	37	6	151857487	151857487	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	151857487	151857487	C	T	SNP	CCDC170	ENST00000367290	human	ensembl	74_37	+1	known	missense	c.92	p.T31M	0.570	NULL	superfamily_Prefoldin,superfamily_Smac_DIABLO-like	-	no_errors	CCDC170	HGNC	ENSG00000120262				178	0	0	142	22	13.4146
SYNE1	0	genome.wustl.edu	37	6	152702327	152702327	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	152702327	152702327	C	A	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.8823	p.Q2941H	0.061	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				189	0	0	197	14	6.63507
SYNE1	0	genome.wustl.edu	37	6	152776602	152776602	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	152776602	152776602	C	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.2851	p.E951K	0.993	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				163	0	0	124	36	22.5
JARID2	0	genome.wustl.edu	37	6	15496926	15496926	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	15496926	15496926	G	A	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	silent	c.1470	p.P490	0.857	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				40	0	0	26	7	21.2121
TIAM2	0	genome.wustl.edu	37	6	155577810	155577810	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	155577810	155577810	T	C	SNP	TIAM2	ENST00000456144	human	ensembl	74_37	+1	known	missense	c.4748	p.L1583S	0.002	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,superfamily_HR1_rho-bd,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM2	HGNC	ENSG00000146426				59	0	0	41	10	19.6078
ARID1B	0	genome.wustl.edu	37	6	157522620	157522620	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	157522620	157522620	T	A	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	missense	c.5012	p.I1671N	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618				235	0	0	173	36	17.2249
SYNJ2	0	genome.wustl.edu	37	6	158499313	158499313	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	158499313	158499313	G	T	SNP	SYNJ2	ENST00000355585	human	ensembl	74_37	+1	known	missense	c.2567	p.R856I	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Syja_N,pfam_DUF1866,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ2	HGNC	ENSG00000078269				191	0	0	169	52	23.5294
SYNJ2	0	genome.wustl.edu	37	6	158509770	158509770	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	158509770	158509770	C	T	SNP	SYNJ2	ENST00000355585	human	ensembl	74_37	+1	known	missense	c.3422	p.T1141M	0.001	NULL	pfam_Syja_N,pfam_DUF1866,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ2	HGNC	ENSG00000078269				138	0	0	108	27	20
TULP4	0	genome.wustl.edu	37	6	158834150	158834150	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	158834150	158834150	G	A	SNP	TULP4	ENST00000367097	human	ensembl	74_37	+1	known	silent	c.306	p.A102	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338				67	0	0	45	17	27.4194
FNDC1	0	genome.wustl.edu	37	6	159654471	159654471	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	159654471	159654471	C	T	SNP	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	missense	c.2927	p.A976V	0.002	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694				19	0	0	18	3	14.2857
PLG	0	genome.wustl.edu	37	6	161132531	161132531	+	RNA	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	161132531	161132531	C	G	SNP	PLG	ENST00000494325	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PLG	HGNC	ENSG00000122194				23	0	0	22	5	18.5185
PLG	0	genome.wustl.edu	37	6	161135861	161135861	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	161135861	161135861	G	T	SNP	PLG	ENST00000308192	human	ensembl	74_37	+1	known	missense	c.583	p.G195C	1.000	pirsf_Pept_S1A_plasmin,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Pept_S1A_plasmin,pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	PLG	HGNC	ENSG00000122194				117	0	0	104	6	5.45455
PLG	0	genome.wustl.edu	37	6	161139823	161139823	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	161139823	161139823	C	T	SNP	PLG	ENST00000308192	human	ensembl	74_37	+1	known	missense	c.1049	p.P350L	0.000	pirsf_Pept_S1A_plasmin,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Pept_S1A_plasmin,pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	PLG	HGNC	ENSG00000122194				74	0	0	58	14	19.4444
CCR6	0	genome.wustl.edu	37	6	167549868	167549868	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	167549868	167549868	G	A	SNP	CCR6	ENST00000341935	human	ensembl	74_37	+1	known	silent	c.150	p.P50	0.000	prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CXCR4	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_CCR6,prints_Chemokine_rcpt,prints_Chemokine_CXCR4,prints_Chemokine_CXCR_1/2	-	no_errors	CCR6	HGNC	ENSG00000112486				245	0	0	170	39	18.6603
MLLT4	0	genome.wustl.edu	37	6	168319457	168319457	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	168319457	168319457	G	A	SNP	MLLT4	ENST00000366806	human	ensembl	74_37	+1	known	missense	c.2731	p.D911N	1.000	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	MLLT4	HGNC	ENSG00000130396				69	0	0	56	9	13.8462
LRRC16A	0	genome.wustl.edu	37	6	25515955	25515955	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	25515955	25515955	T	C	SNP	LRRC16A	ENST00000329474	human	ensembl	74_37	+1	novel	missense	c.1685	p.I562T	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16A	HGNC	ENSG00000079691				26	0	0	15	10	40
SLC17A2	0	genome.wustl.edu	37	6	25921412	25921412	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	25921412	25921412	C	T	SNP	SLC17A2	ENST00000377850	human	ensembl	74_37	-1	known	missense	c.469	p.A157T	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A2	HGNC	ENSG00000112337				106	0	0	89	7	7.29167
BTN3A3	0	genome.wustl.edu	37	6	26452153	26452153	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	26452153	26452153	C	T	SNP	BTN3A3	ENST00000244519	human	ensembl	74_37	+1	known	silent	c.1269	p.V423	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like_dom,prints_Butyrophylin	-	no_errors	BTN3A3	HGNC	ENSG00000111801				101	0	0	81	30	27.027
HIST1H2BL	0	genome.wustl.edu	37	6	27775375	27775375	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	27775375	27775375	G	T	SNP	HIST1H2BL	ENST00000377401	human	ensembl	74_37	-1	known	missense	c.310	p.P104T	1.000	superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BL	HGNC	ENSG00000185130				105	0	0	122	7	5.42636
SCAND3	0	genome.wustl.edu	37	6	28547153	28547153	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	28547153	28547153	A	G	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	missense	c.464	p.M155T	0.074	smart_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040				220	0	0	172	45	20.7373
ZNF311	0	genome.wustl.edu	37	6	28964030	28964030	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	28964030	28964030	G	A	SNP	ZNF311	ENST00000377179	human	ensembl	74_37	-1	known	missense	c.749	p.A250V	0.051	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF311	HGNC	ENSG00000197935				215	0	0	154	43	21.8274
OR2J1	0	genome.wustl.edu	37	6	29068888	29068888	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	29068888	29068888	C	A	SNP	OR2J1	ENST00000377171	human	ensembl	74_37	+1	known	missense	c.169	p.H57N	0.992	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR2J1	HGNC	ENSG00000204702				261	0	0	211	53	20.0758
TRIM26	0	genome.wustl.edu	37	6	30166679	30166679	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	30166679	30166679	C	T	SNP	TRIM26	ENST00000437089	human	ensembl	74_37	-1	known	missense	c.202	p.V68M	0.902	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM26	HGNC	ENSG00000234127				62	0	0	86	5	5.49451
PPP1R10	0	genome.wustl.edu	37	6	30571948	30571948	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	30571948	30571948	G	A	SNP	PPP1R10	ENST00000376511	human	ensembl	74_37	-1	known	missense	c.1345	p.R449C	1.000	NULL	pfam_TFIIS_N,pfam_Znf_CCCH,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_Znf_CCCH	-	no_errors	PPP1R10	HGNC	ENSG00000204569				254	0	0	191	57	22.9839
MDC1	0	genome.wustl.edu	37	6	30673671	30673671	+	Nonsense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	30673671	30673671	C	A	SNP	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	nonsense	c.3289	p.E1097*	0.786	NULL	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337				391	1	0.255102	287	75	20.7182
POU5F1	0	genome.wustl.edu	37	6	31133735	31133735	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	31133735	31133735	G	A	SNP	POU5F1	ENST00000259915	human	ensembl	74_37	-1	known	silent	c.495	p.A165	0.173	pfam_POU_specific,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,pfscan_POU_specific,prints_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU5F1	HGNC	ENSG00000204531				76	0	0	79	6	7.05882
HLA-B	0	genome.wustl.edu	37	6	31322412	31322412	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	31322412	31322412	G	A	SNP	HLA-B	ENST00000412585	human	ensembl	74_37	-1	known	missense	c.1043	p.A348V	0.114	pfam_MHC_I_a_C	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-B	HGNC	ENSG00000234745				94	0	0	85	17	16.6667
AIF1	0	genome.wustl.edu	37	6	31583458	31583458	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	31583458	31583458	C	T	SNP	AIF1	ENST00000376059	human	ensembl	74_37	+1	known	silent	c.99	p.D33	0.998	NULL	pfscan_EF_hand_dom	-	no_errors	AIF1	HGNC	ENSG00000204472				43	0	0	30	11	26.8293
ZBTB12	0	genome.wustl.edu	37	6	31868916	31868916	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	31868916	31868916	G	T	SNP	ZBTB12	ENST00000375527	human	ensembl	74_37	-1	known	missense	c.167	p.P56H	0.989	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB12	HGNC	ENSG00000204366				78	0	0	58	19	24.6753
TNXB	0	genome.wustl.edu	37	6	32011609	32011609	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	32011609	32011609	A	T	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.11441	p.I3814N	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				177	0	0	171	34	16.5854
PRRT1	0	genome.wustl.edu	37	6	32117369	32117369	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	32117369	32117369	G	A	SNP	PRRT1	ENST00000211413	human	ensembl	74_37	-1	known	missense	c.689	p.T230I	1.000	pfam_CD225/Dispanin_fam	pfam_CD225/Dispanin_fam	-	no_errors	PRRT1	HGNC	ENSG00000204314				57	0	0	55	9	14.0625
EGFL8	0	genome.wustl.edu	37	6	32134513	32134513	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	32134513	32134513	G	A	SNP	EGFL8	ENST00000333845	human	ensembl	74_37	+1	known	missense	c.260	p.R87Q	0.987	pfam_EMI_domain,pfscan_EMI_domain	pfam_EMI_domain,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	EGFL8	HGNC	ENSG00000241404				50	0	0	40	12	23.0769
LINC00336	0	genome.wustl.edu	37	6	33561013	33561013	+	RNA	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	33561013	33561013	A	G	SNP	LINC00336	ENST00000477984	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC00336	HGNC	ENSG00000197251				20	0	0	26	9	25.7143
IP6K3	0	genome.wustl.edu	37	6	33703227	33703227	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	33703227	33703227	G	A	SNP	IP6K3	ENST00000293756	human	ensembl	74_37	-1	known	silent	c.27	p.A9	0.003	NULL	pfam_IPK	-	no_errors	IP6K3	HGNC	ENSG00000161896				50	0	0	35	14	28.5714
PACSIN1	0	genome.wustl.edu	37	6	34494033	34494033	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	34494033	34494033	G	A	SNP	PACSIN1	ENST00000486120	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PACSIN1	HGNC	ENSG00000124507				33	0	0	26	7	21.2121
LHFPL5	0	genome.wustl.edu	37	6	35773664	35773664	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	35773664	35773664	C	A	SNP	LHFPL5	ENST00000360215	human	ensembl	74_37	+1	known	missense	c.217	p.L73M	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL5	HGNC	ENSG00000197753				237	0	0	203	46	18.4739
BRPF3	0	genome.wustl.edu	37	6	36198280	36198280	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	36198280	36198280	G	A	SNP	BRPF3	ENST00000357641	human	ensembl	74_37	+1	known	missense	c.3512	p.R1171H	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRPF3	HGNC	ENSG00000096070				53	0	0	55	3	5.17241
ZFAND3	0	genome.wustl.edu	37	6	38120049	38120049	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	38120049	38120049	C	T	SNP	ZFAND3	ENST00000287218	human	ensembl	74_37	+1	known	missense	c.568	p.H190Y	1.000	pfam_Znf_AN1,smart_Znf_AN1,pfscan_Znf_AN1	pfam_Znf_AN1,pfam_Znf_A20,smart_Znf_A20,smart_Znf_AN1,pfscan_Znf_A20,pfscan_Znf_AN1	-	no_errors	ZFAND3	HGNC	ENSG00000156639				196	0	0	142	33	18.8571
DNAH8	0	genome.wustl.edu	37	6	38690893	38690893	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	38690893	38690893	T	C	SNP	DNAH8	ENST00000449981	human	ensembl	74_37	+1	known	missense	c.308	p.L103S	0.000	NULL	pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				106	0	0	83	25	23.1481
KCNK5	0	genome.wustl.edu	37	6	39159505	39159505	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	39159505	39159505	C	T	SNP	KCNK5	ENST00000359534	human	ensembl	74_37	-1	known	missense	c.661	p.A221T	0.978	pfam_2pore_dom_K_chnl_dom	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK5	HGNC	ENSG00000164626				168	0	0	139	30	17.7515
KIF6	0	genome.wustl.edu	37	6	39693056	39693056	+	Silent	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	39693056	39693056	T	G	SNP	KIF6	ENST00000287152	human	ensembl	74_37	-1	known	silent	c.31	p.R11	0.967	superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF6	HGNC	ENSG00000164627				213	0	0	203	46	18.4739
PRPF4B	0	genome.wustl.edu	37	6	4037685	4037685	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	4037685	4037685	C	T	SNP	PRPF4B	ENST00000337659	human	ensembl	74_37	+1	known	silent	c.1293	p.S431	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PRPF4B	HGNC	ENSG00000112739				81	0	0	54	13	19.403
ECI2	0	genome.wustl.edu	37	6	4117629	4117629	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	4117629	4117629	T	C	SNP	ECI2	ENST00000380118	human	ensembl	74_37	-1	known	silent	c.942	p.Q314	0.993	pfam_Crotonase_core_superfam	pfam_Acyl-CoA-binding_protein,pfam_Crotonase_core_superfam,superfamily_Acyl-CoA-binding_protein,prints_Acyl-CoA-binding_protein	-	no_errors	ECI2	HGNC	ENSG00000198721				195	0	0	149	35	19.0217
CUL9	0	genome.wustl.edu	37	6	43181612	43181612	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	43181612	43181612	G	A	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	missense	c.5650	p.G1884R	0.997	smart_Cullin_neddylation_domain	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659				117	0	0	119	33	21.7105
CUL9	0	genome.wustl.edu	37	6	43192051	43192051	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	43192051	43192051	C	T	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	silent	c.7422	p.P2474	0.005	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659				45	0	0	46	17	26.9841
RUNX2	0	genome.wustl.edu	37	6	45390650	45390650	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	45390650	45390650	C	A	SNP	RUNX2	ENST00000352853	human	ensembl	74_37	+1	known	missense	c.583	p.P195T	1.000	pfam_Runt_dom,superfamily_p53-like_TF_DNA-bd,pfscan_Runt_dom,prints_AML1_Runt	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX2	HGNC	ENSG00000124813				22	0	0	29	3	9.375
TFAP2D	0	genome.wustl.edu	37	6	50696582	50696582	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	50696582	50696582	G	A	SNP	TFAP2D	ENST00000008391	human	ensembl	74_37	+1	known	silent	c.612	p.V204	1.000	NULL	pfam_TF_AP2_C,prints_TF_AP2_C	-	no_errors	TFAP2D	HGNC	ENSG00000008197				191	0	0	161	44	21.4634
DST	0	genome.wustl.edu	37	6	56382399	56382399	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	56382399	56382399	G	A	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.18056	p.A6019V	1.000	pfam_Spectrin_repeat,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				64	0	0	40	22	35.4839
DST	0	genome.wustl.edu	37	6	56480956	56480956	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	56480956	56480956	G	A	SNP	DST	ENST00000370765	human	ensembl	74_37	-1	known	missense	c.7309	p.R2437W	0.423	smart_Plectin_repeat	pfam_Plectin_repeat,pfam_Spectrin_repeat,superfamily_Ig/albumin-bd,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DST	HGNC	ENSG00000151914				145	1	0.684932	134	26	16.25
EXOC2	0	genome.wustl.edu	37	6	599181	599181	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	599181	599181	G	A	SNP	EXOC2	ENST00000230449	human	ensembl	74_37	-1	known	missense	c.787	p.R263W	0.976	NULL	pfam_IPT,superfamily_Ig_E-set,superfamily_Cullin_repeat-like_dom	-	no_errors	EXOC2	HGNC	ENSG00000112685				349	0	0	288	32	10
KHDRBS2	0	genome.wustl.edu	37	6	62887178	62887178	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	62887178	62887178	T	A	SNP	KHDRBS2	ENST00000281156	human	ensembl	74_37	-1	known	missense	c.131	p.D44V	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS2	HGNC	ENSG00000112232				77	0	0	52	15	22.3881
COL9A1	0	genome.wustl.edu	37	6	71004218	71004218	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	71004218	71004218	C	T	SNP	COL9A1	ENST00000357250	human	ensembl	74_37	-1	known	silent	c.348	p.T116	0.771	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL9A1	HGNC	ENSG00000112280				347	0	0	221	52	19.0476
RNGTT	0	genome.wustl.edu	37	6	89614482	89614482	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	89614482	89614482	G	A	SNP	RNGTT	ENST00000369485	human	ensembl	74_37	-1	known	silent	c.636	p.P212	0.921	pirsf_mRNA_cap_enz_bifunc	pfam_mRNA_cap_enzyme,pfam_mRNA_cap_enzyme_C,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_NA-bd_OB-fold,pirsf_mRNA_cap_enz_bifunc,pfscan_Tyr/Dual-sp_Pase	-	no_errors	RNGTT	HGNC	ENSG00000111880				153	0	0	131	33	20.122
BACH2	0	genome.wustl.edu	37	6	90661494	90661494	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	90661494	90661494	G	A	SNP	BACH2	ENST00000257749	human	ensembl	74_37	-1	known	missense	c.331	p.R111C	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_BTB_POZ,pfam_bZIP,superfamily_BTB/POZ_fold,superfamily_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP	-	no_errors	BACH2	HGNC	ENSG00000112182				82	0	0	69	25	26.5957
FBXO24	0	genome.wustl.edu	37	7	100192158	100192158	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	100192158	100192158	G	A	SNP	FBXO24	ENST00000427939	human	ensembl	74_37	+1	known	missense	c.1060	p.V354I	1.000	superfamily_RCC1/BLIP-II	pfam_F-box_dom,pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom,pfscan_Reg_chr_condens	-	no_errors	FBXO24	HGNC	ENSG00000106336				42	0	0	34	11	24.4444
GIGYF1	0	genome.wustl.edu	37	7	100282113	100282113	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	100282113	100282113	C	T	SNP	GIGYF1	ENST00000275732	human	ensembl	74_37	-1	known	missense	c.1589	p.R530H	1.000	superfamily_GYF,smart_GYF	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830				63	0	0	51	15	22.7273
GIGYF1	0	genome.wustl.edu	37	7	100283673	100283673	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	100283673	100283673	C	T	SNP	GIGYF1	ENST00000275732	human	ensembl	74_37	-1	known	silent	c.978	p.E326	1.000	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830				51	0	0	49	5	9.25926
EPHB4	0	genome.wustl.edu	37	7	100403278	100403278	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	100403278	100403278	C	T	SNP	EPHB4	ENST00000358173	human	ensembl	74_37	-1	known	silent	c.2523	p.P841	0.010	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB4	HGNC	ENSG00000196411				99	0	0	78	34	30.3571
SLC12A9	0	genome.wustl.edu	37	7	100454739	100454739	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	100454739	100454739	C	T	SNP	SLC12A9	ENST00000354161	human	ensembl	74_37	+1	known	missense	c.698	p.P233L	0.000	pfam_AA-permease/SLC12A_dom	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC12A9	HGNC	ENSG00000146828				101	0	0	95	27	22.1311
TRIM56	0	genome.wustl.edu	37	7	100732369	100732369	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	100732369	100732369	C	T	SNP	TRIM56	ENST00000306085	human	ensembl	74_37	+1	known	silent	c.1776	p.H592	0.722	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_CheY-like_superfamily,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM56	HGNC	ENSG00000169871				92	0	0	73	19	20.6522
CUX1	0	genome.wustl.edu	37	7	101845475	101845475	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	101845475	101845475	C	T	SNP	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	silent	c.2931	p.F977	0.999	pfam_Hmoeo_CUT,superfamily_Lambda_DNA-bd_dom,pfscan_Hmoeo_CUT	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923				118	0	0	104	36	25.7143
LRRC17	0	genome.wustl.edu	37	7	102574619	102574619	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	102574619	102574619	C	T	SNP	LRRC17	ENST00000339431	human	ensembl	74_37	+1	known	silent	c.259	p.L87	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC17	HGNC	ENSG00000128606				127	0	0	111	16	12.5984
PRKAR2B	0	genome.wustl.edu	37	7	106791470	106791470	+	Splice_Site	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	106791470	106791470	T	C	SNP	PRKAR2B	ENST00000265717	human	ensembl	74_37	+1	known	splice_site	c.843+2	e7+2	1.000	-	-	-	no_errors	PRKAR2B	HGNC	ENSG00000005249				64	0	0	45	11	19.6429
PPP1R3A	0	genome.wustl.edu	37	7	113519436	113519436	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	113519436	113519436	C	T	SNP	PPP1R3A	ENST00000284601	human	ensembl	74_37	-1	known	missense	c.1711	p.A571T	0.000	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3A	HGNC	ENSG00000154415				229	1	0.434783	158	39	19.797
CFTR	0	genome.wustl.edu	37	7	117171005	117171005	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	117171005	117171005	A	G	SNP	CFTR	ENST00000003084	human	ensembl	74_37	+1	known	missense	c.326	p.Y109C	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626				96	0	0	55	10	15.3846
KCND2	0	genome.wustl.edu	37	7	119915439	119915439	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	119915439	119915439	G	A	SNP	KCND2	ENST00000331113	human	ensembl	74_37	+1	known	silent	c.753	p.A251	0.012	pfam_Ion_trans_dom,prints_K_chnl	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.2,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND2	HGNC	ENSG00000184408				90	0	0	58	14	19.4444
CPED1	0	genome.wustl.edu	37	7	120781026	120781026	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	120781026	120781026	G	C	SNP	CPED1	ENST00000310396	human	ensembl	74_37	+1	known	missense	c.1845	p.K615N	0.983	NULL	NULL	-	no_errors	CPED1	HGNC	ENSG00000106034				97	0	0	88	5	5.37634
TMEM106B	0	genome.wustl.edu	37	7	12263969	12263969	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	12263969	12263969	C	T	SNP	TMEM106B	ENST00000396667	human	ensembl	74_37	+1	known	silent	c.399	p.V133	1.000	pfam_DUF1356_TMEM106	pfam_DUF1356_TMEM106	-	no_errors	TMEM106B	HGNC	ENSG00000106460				354	0	0	293	57	16.2857
HYAL4	0	genome.wustl.edu	37	7	123508820	123508820	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	123508820	123508820	C	A	SNP	HYAL4	ENST00000223026	human	ensembl	74_37	+1	known	missense	c.493	p.Q165K	0.028	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL4	HGNC	ENSG00000106302				197	0	0	177	12	6.34921
GCC1	0	genome.wustl.edu	37	7	127223030	127223030	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	127223030	127223030	C	T	SNP	GCC1	ENST00000321407	human	ensembl	74_37	-1	known	missense	c.1366	p.V456M	0.989	NULL	pfam_GRIP,superfamily_ARM-type_fold,smart_GRIP,pfscan_GRIP	-	no_errors	GCC1	HGNC	ENSG00000179562				219	1	0.454545	152	35	18.7166
FSCN3	0	genome.wustl.edu	37	7	127235709	127235709	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	127235709	127235709	C	T	SNP	FSCN3	ENST00000265825	human	ensembl	74_37	+1	known	missense	c.493	p.R165C	0.931	superfamily_Actin_cross-linking	pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FSCN3	HGNC	ENSG00000106328				128	0	0	92	20	17.8571
FLNC	0	genome.wustl.edu	37	7	128483862	128483862	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	128483862	128483862	G	A	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	missense	c.2824	p.V942M	0.878	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591				245	0	0	298	17	5.39683
FLNC	0	genome.wustl.edu	37	7	128494555	128494555	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	128494555	128494555	C	T	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	silent	c.6816	p.S2272	0.993	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591				9	0	0	7	3	30
STRIP2	0	genome.wustl.edu	37	7	129122851	129122851	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	129122851	129122851	C	T	SNP	STRIP2	ENST00000249344	human	ensembl	74_37	+1	known	missense	c.2218	p.R740C	1.000	pfam_DUF3402	pfam_DUF3402,pfam_N1221	-	no_errors	STRIP2	HGNC	ENSG00000128578				53	0	0	70	7	9.09091
COPG2	0	genome.wustl.edu	37	7	130351756	130351756	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	130351756	130351756	T	C	SNP	COPG2	ENST00000445977	human	ensembl	74_37	-1	known	missense	c.104	p.N35S	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold	-	no_errors	COPG2	HGNC	ENSG00000158623				10	0	0	15	8	34.7826
PLXNA4	0	genome.wustl.edu	37	7	131895805	131895805	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	131895805	131895805	G	T	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	missense	c.2195	p.S732Y	1.000	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866				31	0	0	19	9	32.1429
CHCHD3	0	genome.wustl.edu	37	7	132659927	132659927	+	Splice_Site	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	132659927	132659927	A	G	SNP	CHCHD3	ENST00000423635	human	ensembl	74_37	-1	known	splice_site	c.459+2	e5+2	1.000	-	-	-	no_errors	CHCHD3	HGNC	ENSG00000106554				166	0	0	106	27	20.3008
CNOT4	0	genome.wustl.edu	37	7	135079001	135079001	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	135079001	135079001	C	T	SNP	CNOT4	ENST00000541284	human	ensembl	74_37	-1	known	silent	c.1296	p.S432	0.458	NULL	pfam_RRM_dom,smart_RRM_dom_euk,pfscan_Znf_RING,pfscan_RRM_dom	-	no_errors	CNOT4	HGNC	ENSG00000080802				188	0	0	115	41	26.2821
DGKI	0	genome.wustl.edu	37	7	137270094	137270094	+	Splice_Site	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	137270094	137270094	T	C	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	splice_site	c.1426-2	e14-2	1.000	-	-	-	no_errors	DGKI	HGNC	ENSG00000157680				118	0	0	94	19	16.8142
ZC3HAV1	0	genome.wustl.edu	37	7	138758625	138758625	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	138758625	138758625	T	C	SNP	ZC3HAV1	ENST00000242351	human	ensembl	74_37	-1	known	missense	c.1849	p.T617A	0.000	pfscan_WWE-dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	ZC3HAV1	HGNC	ENSG00000105939				182	0	0	140	28	16.6667
HIPK2	0	genome.wustl.edu	37	7	139268623	139268623	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	139268623	139268623	C	T	SNP	HIPK2	ENST00000406875	human	ensembl	74_37	-1	known	missense	c.2905	p.V969M	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK2	HGNC	ENSG00000064393				24	0	0	18	5	21.7391
HIPK2	0	genome.wustl.edu	37	7	139315949	139315949	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	139315949	139315949	G	A	SNP	HIPK2	ENST00000406875	human	ensembl	74_37	-1	known	missense	c.1309	p.R437C	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK2	HGNC	ENSG00000064393				32	0	0	39	9	18.75
AGK	0	genome.wustl.edu	37	7	141351372	141351372	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	141351372	141351372	G	A	SNP	AGK	ENST00000355413	human	ensembl	74_37	+1	known	missense	c.1094	p.C365Y	0.942	NULL	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	AGK	HGNC	ENSG00000006530				51	0	0	39	8	17.0213
KIAA1147	0	genome.wustl.edu	37	7	141386388	141386388	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	141386388	141386388	A	G	SNP	KIAA1147	ENST00000536163	human	ensembl	74_37	-1	known	silent	c.339	p.S113	0.992	pfam_DUF2347	pfam_DUF2347	-	no_errors	KIAA1147	HGNC	ENSG00000257093				49	0	0	30	8	21.0526
MGAM	0	genome.wustl.edu	37	7	141776518	141776518	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	141776518	141776518	C	T	SNP	MGAM	ENST00000475668	human	ensembl	74_37	+1	putative	silent	c.5385	p.F1795	0.019	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335				102	0	0	68	20	22.7273
EPHB6	0	genome.wustl.edu	37	7	142568426	142568426	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	142568426	142568426	A	G	SNP	EPHB6	ENST00000392957	human	ensembl	74_37	+1	known	missense	c.2945	p.Q982R	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB6	HGNC	ENSG00000106123				198	0	0	146	36	19.7802
TAS2R60	0	genome.wustl.edu	37	7	143140741	143140741	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	143140741	143140741	C	T	SNP	TAS2R60	ENST00000332690	human	ensembl	74_37	+1	known	missense	c.196	p.R66C	0.003	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R60	HGNC	ENSG00000185899				185	0	0	150	49	24.6231
OR6B1	0	genome.wustl.edu	37	7	143701922	143701922	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	143701922	143701922	T	C	SNP	OR6B1	ENST00000408922	human	ensembl	74_37	+1	known	missense	c.833	p.I278T	0.227	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6B1	HGNC	ENSG00000221813				223	0	0	165	39	19.1176
OR2A14	0	genome.wustl.edu	37	7	143826976	143826976	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	143826976	143826976	G	A	SNP	OR2A14	ENST00000408899	human	ensembl	74_37	+1	known	silent	c.771	p.T257	0.969	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2A14	HGNC	ENSG00000221938				265	0	0	224	48	17.6471
MICALL2	0	genome.wustl.edu	37	7	1484922	1484922	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	1484922	1484922	C	T	SNP	MICALL2	ENST00000297508	human	ensembl	74_37	-1	known	missense	c.784	p.A262T	0.004	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL2	HGNC	ENSG00000164877				34	0	0	37	3	7.5
ZNF786	0	genome.wustl.edu	37	7	148768017	148768017	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	148768017	148768017	G	A	SNP	ZNF786	ENST00000491431	human	ensembl	74_37	-1	known	missense	c.1847	p.T616M	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF786	HGNC	ENSG00000197362				49	0	0	42	21	33.3333
ZNF746	0	genome.wustl.edu	37	7	149171723	149171723	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	149171723	149171723	C	T	SNP	ZNF746	ENST00000458143	human	ensembl	74_37	-1	known	missense	c.1690	p.V564M	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_DUF3669_Znf,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF746	HGNC	ENSG00000181220				30	0	0	12	7	36.8421
DPP6	0	genome.wustl.edu	37	7	154263935	154263935	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	154263935	154263935	A	T	SNP	DPP6	ENST00000377770	human	ensembl	74_37	+1	known	missense	c.561	p.L187F	0.967	NULL	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_PD40	-	no_errors	DPP6	HGNC	ENSG00000130226				74	0	0	57	16	21.9178
TMEM184A	0	genome.wustl.edu	37	7	1588314	1588314	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	1588314	1588314	C	T	SNP	TMEM184A	ENST00000297477	human	ensembl	74_37	-1	known	missense	c.655	p.G219S	1.000	pfam_Ost-alpha	pfam_Ost-alpha	-	no_errors	TMEM184A	HGNC	ENSG00000164855				33	0	0	39	5	11.3636
VIPR2	0	genome.wustl.edu	37	7	158896468	158896468	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	158896468	158896468	C	T	SNP	VIPR2	ENST00000262178	human	ensembl	74_37	-1	known	missense	c.337	p.D113N	0.295	smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,prints_GPCR_2_VIP_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_VIP_rcpt_2,prints_GPCR_2_secretin-like,prints_GPCR_2_VIP_rcpt	-	no_errors	VIPR2	HGNC	ENSG00000106018				92	0	0	86	13	13.1313
SNX13	0	genome.wustl.edu	37	7	17908067	17908067	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	17908067	17908067	C	T	SNP	SNX13	ENST00000428135	human	ensembl	74_37	-1	known	missense	c.800	p.S267N	1.000	pfam_Phox_assoc,smart_PX_assoc_Snx13,pfscan_Phox_assoc	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_Phox,pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_Phox,superfamily_Cyt_c_oxidase_su5A/6,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal_superfam,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	SNX13	HGNC	ENSG00000071189				43	0	0	40	13	24.5283
ABCB5	0	genome.wustl.edu	37	7	20785017	20785017	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	20785017	20785017	G	A	SNP	ABCB5	ENST00000258738	human	ensembl	74_37	+1	known	missense	c.2050	p.A684T	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846				139	0	0	107	28	20.7407
RAPGEF5	0	genome.wustl.edu	37	7	22197498	22197498	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	22197498	22197498	A	G	SNP	RAPGEF5	ENST00000344041	human	ensembl	74_37	-1	known	missense	c.1073	p.V358A	0.991	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF5	HGNC	ENSG00000136237				100	0	0	63	7	10
FAM126A	0	genome.wustl.edu	37	7	23018028	23018028	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	23018028	23018028	G	A	SNP	FAM126A	ENST00000432176	human	ensembl	74_37	-1	known	missense	c.193	p.R65C	1.000	pfam_Hyccin	pfam_Hyccin	-	no_errors	FAM126A	HGNC	ENSG00000122591				88	0	0	75	15	16.6667
EIF3B	0	genome.wustl.edu	37	7	2402723	2402723	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	2402723	2402723	C	G	SNP	EIF3B	ENST00000360876	human	ensembl	74_37	+1	known	missense	c.831	p.D277E	0.979	pirsf_EIF3B	pfam_TIF_beta_prop-like,pfam_RRM_dom,smart_RRM_dom,pirsf_EIF3B,pfscan_RRM_dom	-	no_errors	EIF3B	HGNC	ENSG00000106263				368	0	0	360	20	5.26316
TTYH3	0	genome.wustl.edu	37	7	2687619	2687619	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	2687619	2687619	T	C	SNP	TTYH3	ENST00000258796	human	ensembl	74_37	+1	known	missense	c.653	p.L218P	1.000	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH3	HGNC	ENSG00000136295				73	0	0	64	20	23.8095
NOD1	0	genome.wustl.edu	37	7	30465314	30465314	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	30465314	30465314	G	A	SNP	NOD1	ENST00000222823	human	ensembl	74_37	-1	known	silent	c.2802	p.N934	0.911	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD1	HGNC	ENSG00000106100				149	0	0	138	12	8
BBS9	0	genome.wustl.edu	37	7	33195315	33195315	+	Splice_Site	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	33195315	33195315	G	A	SNP	BBS9	ENST00000242067	human	ensembl	74_37	+1	known	splice_site	c.328+1	e3+1	1.000	-	-	-	no_errors	BBS9	HGNC	ENSG00000122507				74	0	0	43	7	14
C7orf10	0	genome.wustl.edu	37	7	40899966	40899966	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	40899966	40899966	C	T	SNP	C7orf10	ENST00000309930	human	ensembl	74_37	+1	known	missense	c.1304	p.P435L	1.000	superfamily_CoA-Trfase_III_dom	pfam_CoA-Trfase_fam_III,superfamily_CoA-Trfase_III_dom	-	no_errors	C7orf10	HGNC	ENSG00000175600				223	0	0	203	39	16.1157
GLI3	0	genome.wustl.edu	37	7	42004994	42004994	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	42004994	42004994	G	T	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.3677	p.P1226Q	0.003	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				97	0	0	89	17	16.0377
STK17A	0	genome.wustl.edu	37	7	43635706	43635706	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	43635706	43635706	T	G	SNP	STK17A	ENST00000319357	human	ensembl	74_37	+1	known	missense	c.413	p.L138R	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK17A	HGNC	ENSG00000164543				211	0	0	162	49	23.2227
DBNL	0	genome.wustl.edu	37	7	44097480	44097480	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	44097480	44097480	G	A	SNP	DBNL	ENST00000497184	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DBNL	HGNC	ENSG00000136279				55	0	0	46	8	14.8148
POLM	0	genome.wustl.edu	37	7	44113278	44113278	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	44113278	44113278	G	A	SNP	POLM	ENST00000242248	human	ensembl	74_37	-1	known	silent	c.1344	p.S448	0.993	smart_DNA-dir_DNA_pol_X,pirsf_TdT/Mu,prints_TdT/Mu	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_DNA-dir_DNA_pol_X,pirsf_TdT/Mu,pfscan_BRCT_dom,prints_TdT/Mu,prints_DNA_pol_X,prints_DNA_pol_X_beta-like	-	no_errors	POLM	HGNC	ENSG00000122678				112	0	0	102	24	19.0476
AEBP1	0	genome.wustl.edu	37	7	44151594	44151594	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	44151594	44151594	G	A	SNP	AEBP1	ENST00000223357	human	ensembl	74_37	+1	known	missense	c.1982	p.R661H	1.000	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	AEBP1	HGNC	ENSG00000106624				59	0	0	46	10	17.8571
CCM2	0	genome.wustl.edu	37	7	45103550	45103550	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	45103550	45103550	C	A	SNP	CCM2	ENST00000381112	human	ensembl	74_37	+1	known	missense	c.301	p.L101M	1.000	pfscan_PTB/PI_dom	pfscan_PTB/PI_dom	-	no_errors	CCM2	HGNC	ENSG00000136280				154	1	0.645161	128	26	16.8831
TBRG4	0	genome.wustl.edu	37	7	45142994	45142994	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	45142994	45142994	C	T	SNP	TBRG4	ENST00000258770	human	ensembl	74_37	-1	known	missense	c.1114	p.V372I	0.003	pfam_FAST_Leu-rich	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	TBRG4	HGNC	ENSG00000136270				45	0	0	32	4	11.1111
ADCY1	0	genome.wustl.edu	37	7	45748012	45748012	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	45748012	45748012	G	A	SNP	ADCY1	ENST00000297323	human	ensembl	74_37	+1	known	missense	c.2881	p.V961I	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY1	HGNC	ENSG00000164742				121	0	0	83	18	17.8218
IKZF1	0	genome.wustl.edu	37	7	50468283	50468283	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	50468283	50468283	G	A	SNP	IKZF1	ENST00000331340	human	ensembl	74_37	+1	known	silent	c.1518	p.S506	0.075	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF1	HGNC	ENSG00000185811				28	0	0	23	4	14.8148
SLC29A4	0	genome.wustl.edu	37	7	5330864	5330864	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	5330864	5330864	C	T	SNP	SLC29A4	ENST00000297195	human	ensembl	74_37	+1	known	silent	c.411	p.T137	0.969	superfamily_MFS_dom_general_subst_transpt	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt	-	no_errors	SLC29A4	HGNC	ENSG00000164638				41	0	0	18	5	21.7391
EGFR	0	genome.wustl.edu	37	7	55240694	55240694	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	55240694	55240694	C	T	SNP	EGFR	ENST00000275493	human	ensembl	74_37	+1	known	silent	c.1938	p.I646	0.177	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EGFR	HGNC	ENSG00000146648				109	0	0	106	23	17.8295
CCT6A	0	genome.wustl.edu	37	7	56126071	56126071	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	56126071	56126071	T	G	SNP	CCT6A	ENST00000275603	human	ensembl	74_37	+1	known	missense	c.742	p.F248V	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,tigrfam_Chap_CCT_zeta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_zeta	-	no_errors	CCT6A	HGNC	ENSG00000146731				87	0	0	51	3	5.55556
ERV3-1	0	genome.wustl.edu	37	7	64452895	64452895	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	64452895	64452895	C	T	SNP	ERV3-1	ENST00000394323	human	ensembl	74_37	-1	known	silent	c.510	p.T170	0.212	NULL	NULL	-	no_errors	ERV3-1	HGNC	ENSG00000213462				181	0	0	170	31	15.4229
KDELR2	0	genome.wustl.edu	37	7	6505847	6505847	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	6505847	6505847	G	A	SNP	KDELR2	ENST00000258739	human	ensembl	74_37	-1	known	silent	c.459	p.F153	1.000	pfam_ER_ret_rcpt,prints_ER_ret_rcpt	pfam_ER_ret_rcpt,prints_ER_ret_rcpt	-	no_errors	KDELR2	HGNC	ENSG00000136240				111	0	0	111	25	18.3824
AUTS2	0	genome.wustl.edu	37	7	70252292	70252292	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	70252292	70252292	G	A	SNP	AUTS2	ENST00000342771	human	ensembl	74_37	+1	known	silent	c.2406	p.S802	1.000	prints_AUTS2	prints_AUTS2	-	no_errors	AUTS2	HGNC	ENSG00000158321				59	0	0	57	13	18.5714
WBSCR17	0	genome.wustl.edu	37	7	71142200	71142200	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	71142200	71142200	G	A	SNP	WBSCR17	ENST00000333538	human	ensembl	74_37	+1	known	missense	c.1409	p.R470H	0.998	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	WBSCR17	HGNC	ENSG00000185274				421	1	0.236967	343	93	21.3303
TRIM50	0	genome.wustl.edu	37	7	72738518	72738518	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	72738518	72738518	C	T	SNP	TRIM50	ENST00000333149	human	ensembl	74_37	-1	known	missense	c.268	p.V90M	0.000	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM50	HGNC	ENSG00000146755				123	0	0	107	25	18.9394
CLDN4	0	genome.wustl.edu	37	7	73245910	73245910	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	73245910	73245910	T	A	SNP	CLDN4	ENST00000340958	human	ensembl	74_37	+1	known	missense	c.379	p.L127M	0.809	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin4	-	no_errors	CLDN4	HGNC	ENSG00000189143				41	0	0	35	5	12.5
EIF4H	0	genome.wustl.edu	37	7	73604058	73604058	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	73604058	73604058	C	T	SNP	EIF4H	ENST00000265753	human	ensembl	74_37	+1	known	silent	c.303	p.Y101	0.979	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	EIF4H	HGNC	ENSG00000106682				155	1	0.641026	136	29	17.5758
LAT2	0	genome.wustl.edu	37	7	73638506	73638506	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	73638506	73638506	C	T	SNP	LAT2	ENST00000275635	human	ensembl	74_37	+1	known	missense	c.607	p.R203C	0.796	NULL	NULL	-	no_errors	LAT2	HGNC	ENSG00000086730				126	1	0.787402	133	27	16.875
GTF2IRD2B	0	genome.wustl.edu	37	7	74564631	74564631	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	74564631	74564631	T	C	SNP	GTF2IRD2B	ENST00000312575	human	ensembl	74_37	+1	known	missense	c.2378	p.L793P	0.993	superfamily_RNaseH-like_dom	pfam_GTF2I,superfamily_GTF2I,superfamily_RNaseH-like_dom,pfscan_GTF2I	-	no_errors	GTF2IRD2B	HGNC	ENSG00000174428				89	0	0	73	18	19.7802
TMEM243	0	genome.wustl.edu	37	7	86827314	86827314	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	86827314	86827314	C	T	SNP	TMEM243	ENST00000257637	human	ensembl	74_37	-1	known	silent	c.177	p.P59	0.002	pfam_DUF2678	pfam_DUF2678	-	no_errors	TMEM243	HGNC	ENSG00000135185				174	0	0	159	36	18.4615
STEAP4	0	genome.wustl.edu	37	7	87912268	87912268	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	87912268	87912268	G	C	SNP	STEAP4	ENST00000380079	human	ensembl	74_37	-1	known	missense	c.672	p.I224M	1.000	NULL	pfam_Fe3_Rdtase_TM_dom	-	no_errors	STEAP4	HGNC	ENSG00000127954				157	0	0	113	20	15.0376
ZNF804B	0	genome.wustl.edu	37	7	88963633	88963633	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	88963633	88963633	T	G	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.1337	p.V446G	1.000	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348				127	1	0.78125	98	24	19.6721
KRIT1	0	genome.wustl.edu	37	7	91852279	91852279	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	91852279	91852279	C	T	SNP	KRIT1	ENST00000340022	human	ensembl	74_37	-1	known	missense	c.1268	p.R423Q	1.000	smart_Band_41_domain,pfscan_FERM_domain	pfam_FERM_central,superfamily_Ankyrin_rpt-contain_dom,superfamily_FERM_central,smart_Ankyrin_rpt,smart_Band_41_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_FERM_domain	-	no_errors	KRIT1	HGNC	ENSG00000001631				110	1	0.900901	103	6	5.50459
ANKIB1	0	genome.wustl.edu	37	7	92027163	92027163	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	92027163	92027163	A	G	SNP	ANKIB1	ENST00000265742	human	ensembl	74_37	+1	known	missense	c.2522	p.D841G	1.000	NULL	pfam_Znf_C6HC,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Znf_RING,smart_Znf_C6HC,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif,pfscan_Znf_RING	-	no_errors	ANKIB1	HGNC	ENSG00000001629				237	0	0	194	32	14.1593
ZNF394	0	genome.wustl.edu	37	7	99091276	99091276	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	99091276	99091276	C	A	SNP	ZNF394	ENST00000337673	human	ensembl	74_37	-1	known	missense	c.1562	p.G521V	1.000	pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF394	HGNC	ENSG00000160908				346	0	0	253	53	17.3203
MCM7	0	genome.wustl.edu	37	7	99690627	99690627	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	99690627	99690627	C	T	SNP	MCM7	ENST00000303887	human	ensembl	74_37	-1	known	silent	c.2088	p.A696	0.778	NULL	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase,prints_MCM7,prints_MCM_4	-	no_errors	MCM7	HGNC	ENSG00000166508				70	0	0	64	9	12.3288
PVRIG	0	genome.wustl.edu	37	7	99818219	99818219	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	99818219	99818219	C	T	SNP	PVRIG	ENST00000317271	human	ensembl	74_37	+1	known	silent	c.519	p.A173	0.859	NULL	NULL	-	no_errors	PVRIG	HGNC	ENSG00000213413				106	0	0	90	19	17.4312
KLF10	0	genome.wustl.edu	37	8	103663847	103663847	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	103663847	103663847	G	A	SNP	KLF10	ENST00000285407	human	ensembl	74_37	-1	known	missense	c.713	p.T238M	0.546	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF10	HGNC	ENSG00000155090				124	0	0	92	32	25.8065
RP1L1	0	genome.wustl.edu	37	8	10469597	10469597	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	10469597	10469597	G	A	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.2011	p.R671C	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638				162	0	0	196	22	10.0917
ZFPM2	0	genome.wustl.edu	37	8	106813836	106813836	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	106813836	106813836	T	C	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.1526	p.M509T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946				331	0	0	372	25	6.29723
OXR1	0	genome.wustl.edu	37	8	107763096	107763096	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	107763096	107763096	C	T	SNP	OXR1	ENST00000442977	human	ensembl	74_37	+1	known	missense	c.2552	p.T851M	1.000	pfam_TLDc,smart_TLDc	pfam_TLDc,pfam_LysM_dom,pfam_GRAM,smart_LysM_dom,smart_TLDc	-	no_errors	OXR1	HGNC	ENSG00000164830				240	0	0	242	14	5.46875
PKHD1L1	0	genome.wustl.edu	37	8	110432768	110432768	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	110432768	110432768	C	T	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.2546	p.P849L	1.000	NULL	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				67	0	0	67	8	10.6667
CSMD3	0	genome.wustl.edu	37	8	113529433	113529433	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	113529433	113529433	C	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.4586	p.R1529H	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				88	0	0	97	17	14.9123
TRPS1	0	genome.wustl.edu	37	8	116426706	116426706	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	116426706	116426706	C	T	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.3430	p.V1144M	1.000	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447				81	0	0	58	9	13.4328
TRPS1	0	genome.wustl.edu	37	8	116430602	116430602	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	116430602	116430602	C	T	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.2779	p.G927R	1.000	pfam_Znf_GATA,smart_Znf_GATA,pfscan_Znf_GATA,prints_Znf_GATA	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447				279	0	0	275	44	13.7931
AARD	0	genome.wustl.edu	37	8	117950492	117950492	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	117950492	117950492	G	A	SNP	AARD	ENST00000378279	human	ensembl	74_37	+1	known	missense	c.10	p.G4R	0.000	NULL	NULL	-	no_errors	AARD	HGNC	ENSG00000205002				31	0	0	25	3	10.7143
EXT1	0	genome.wustl.edu	37	8	119123086	119123086	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	119123086	119123086	G	T	SNP	EXT1	ENST00000378204	human	ensembl	74_37	-1	known	missense	c.200	p.P67H	1.000	NULL	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXT1	HGNC	ENSG00000182197				125	0	0	125	26	17.2185
FAM86B1	0	genome.wustl.edu	37	8	12044028	12044028	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	12044028	12044028	C	T	SNP	FAM86B1	ENST00000448228	human	ensembl	74_37	-1	known	missense	c.473	p.R158Q	0.084	pfam_Nicotinamide_N-MeTfrase-like	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	FAM86B1	HGNC	ENSG00000186523				63	0	0	66	9	12
ZHX1	0	genome.wustl.edu	37	8	124267604	124267604	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	124267604	124267604	G	A	SNP	ZHX1	ENST00000297857	human	ensembl	74_37	-1	known	missense	c.583	p.R195W	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZHX1	HGNC	ENSG00000165156				270	0	0	289	49	14.497
KLHL38	0	genome.wustl.edu	37	8	124663913	124663913	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	124663913	124663913	G	A	SNP	KLHL38	ENST00000325995	human	ensembl	74_37	-1	known	silent	c.1254	p.P418	0.037	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL38	HGNC	ENSG00000175946				122	0	0	143	11	7.14286
ZFAT	0	genome.wustl.edu	37	8	135596140	135596140	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	135596140	135596140	A	G	SNP	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	missense	c.2822	p.M941T	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827				45	0	0	49	5	9.25926
ZFAT	0	genome.wustl.edu	37	8	135612794	135612794	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	135612794	135612794	C	T	SNP	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	missense	c.2360	p.R787H	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827				288	1	0.346021	257	37	12.585
ZFAT	0	genome.wustl.edu	37	8	135614222	135614222	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	135614222	135614222	G	A	SNP	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	silent	c.1740	p.T580	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827				50	0	0	62	11	15.0685
FAM135B	0	genome.wustl.edu	37	8	139164785	139164785	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	139164785	139164785	T	G	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	missense	c.1933	p.S645R	0.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724				183	0	0	200	12	5.66038
SGCZ	0	genome.wustl.edu	37	8	13965704	13965704	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	13965704	13965704	C	T	SNP	SGCZ	ENST00000382080	human	ensembl	74_37	-1	known	silent	c.588	p.P196	0.934	pfam_Sarcoglycan	pfam_Sarcoglycan	-	no_errors	SGCZ	HGNC	ENSG00000185053				54	0	0	72	9	11.1111
COL22A1	0	genome.wustl.edu	37	8	139833475	139833475	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	139833475	139833475	C	T	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	silent	c.1149	p.A383	0.052	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436				94	0	0	111	12	9.7561
DENND3	0	genome.wustl.edu	37	8	142151345	142151345	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	142151345	142151345	C	A	SNP	DENND3	ENST00000262585	human	ensembl	74_37	+1	known	missense	c.305	p.P102H	0.001	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_WD40_repeat,pfam_uDENN_dom,superfamily_WD40_repeat_dom,smart_DENN_dom,smart_dDENN_dom,smart_WD40_repeat,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_WD40_repeat_dom	-	no_errors	DENND3	HGNC	ENSG00000105339				124	0	0	173	11	5.97826
SLC45A4	0	genome.wustl.edu	37	8	142221699	142221699	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	142221699	142221699	A	T	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.2399	p.I800N	0.000	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				125	0	0	151	8	5.03145
TSNARE1	0	genome.wustl.edu	37	8	143399948	143399948	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	143399948	143399948	C	G	SNP	TSNARE1	ENST00000307180	human	ensembl	74_37	-1	known	missense	c.941	p.S314T	0.000	superfamily_t-SNARE,smart_Syntaxin_N	pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	TSNARE1	HGNC	ENSG00000171045				170	0	0	188	10	5.05051
JRK	0	genome.wustl.edu	37	8	143747230	143747230	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	143747230	143747230	G	A	SNP	JRK	ENST00000422119	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	JRK	HGNC	ENSG00000234616				21	0	0	18	4	18.1818
CYP11B1	0	genome.wustl.edu	37	8	143957721	143957721	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	143957721	143957721	G	A	SNP	CYP11B1	ENST00000292427	human	ensembl	74_37	-1	known	missense	c.890	p.A297V	0.006	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP11B1	HGNC	ENSG00000160882				58	0	0	51	12	19.0476
TOP1MT	0	genome.wustl.edu	37	8	144406745	144406745	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	144406745	144406745	G	A	SNP	TOP1MT	ENST00000329245	human	ensembl	74_37	-1	known	silent	c.726	p.S242	0.000	pfam_TopoI_DNA-bd_euk,superfamily_TopoI_DNA-bd_euk,smart_TopoI_euk	pfam_TopoI_DNA-bd_euk,pfam_TopoI_cat_euk,superfamily_TopoI_DNA-bd_euk,superfamily_DNA_brk_join_enz,smart_TopoI_euk,prints_TopoI	-	no_errors	TOP1MT	HGNC	ENSG00000184428				157	0	0	165	33	16.6667
FAM83H	0	genome.wustl.edu	37	8	144810854	144810854	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	144810854	144810854	C	T	SNP	FAM83H	ENST00000388913	human	ensembl	74_37	-1	known	silent	c.777	p.A259	0.487	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83H	HGNC	ENSG00000180921				49	0	0	34	9	20.9302
EPPK1	0	genome.wustl.edu	37	8	144942069	144942069	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	144942069	144942069	G	A	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.5353	p.R1785C	0.022	NULL	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				107	0	0	92	29	23.9669
PLEC	0	genome.wustl.edu	37	8	144993399	144993399	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	144993399	144993399	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.11001	p.C3667	0.203	smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				115	1	0.862069	129	14	9.79021
GRINA	0	genome.wustl.edu	37	8	145066190	145066190	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	145066190	145066190	G	A	SNP	GRINA	ENST00000313269	human	ensembl	74_37	+1	known	missense	c.637	p.V213I	0.997	pfam_Bax_inhibitor_1-related	pfam_Bax_inhibitor_1-related	-	no_errors	GRINA	HGNC	ENSG00000178719				193	1	0.515464	184	44	19.2982
TONSL	0	genome.wustl.edu	37	8	145666225	145666225	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	145666225	145666225	G	A	SNP	TONSL	ENST00000409379	human	ensembl	74_37	-1	known	missense	c.1040	p.P347L	0.995	pfscan_TPR-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TONSL	HGNC	ENSG00000160949				45	0	0	78	7	8.23529
LRRC14	0	genome.wustl.edu	37	8	145746672	145746672	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	145746672	145746672	C	A	SNP	LRRC14	ENST00000292524	human	ensembl	74_37	+1	known	missense	c.1292	p.P431H	0.999	NULL	NULL	-	no_errors	LRRC14	HGNC	ENSG00000160959				51	0	0	68	6	8.10811
ARHGAP39	0	genome.wustl.edu	37	8	145770865	145770865	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	145770865	145770865	T	C	SNP	ARHGAP39	ENST00000377307	human	ensembl	74_37	-1	known	silent	c.2289	p.P763	0.017	smart_MyTH4_dom,pfscan_MyTH4_dom	pfam_RhoGAP_dom,pfam_MyTH4_dom,superfamily_Rho_GTPase_activation_prot,superfamily_WW_dom,smart_WW_dom,smart_MyTH4_dom,smart_RhoGAP_dom,pfscan_MyTH4_dom,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP39	HGNC	ENSG00000147799				41	0	0	49	10	16.9492
ARHGAP39	0	genome.wustl.edu	37	8	145773530	145773530	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	145773530	145773530	C	T	SNP	ARHGAP39	ENST00000377307	human	ensembl	74_37	-1	known	missense	c.940	p.E314K	1.000	NULL	pfam_RhoGAP_dom,pfam_MyTH4_dom,superfamily_Rho_GTPase_activation_prot,superfamily_WW_dom,smart_WW_dom,smart_MyTH4_dom,smart_RhoGAP_dom,pfscan_MyTH4_dom,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP39	HGNC	ENSG00000147799				48	0	0	63	13	17.1053
ZNF34	0	genome.wustl.edu	37	8	145999295	145999295	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	145999295	145999295	A	G	SNP	ZNF34	ENST00000343459	human	ensembl	74_37	-1	known	missense	c.1039	p.Y347H	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF34	HGNC	ENSG00000196378				77	0	0	89	14	13.5922
ZNF16	0	genome.wustl.edu	37	8	146156790	146156790	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	146156790	146156790	G	A	SNP	ZNF16	ENST00000276816	human	ensembl	74_37	-1	known	silent	c.1383	p.H461	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF16	HGNC	ENSG00000170631				166	0	0	205	17	7.65766
ZNF16	0	genome.wustl.edu	37	8	146157713	146157713	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	146157713	146157713	C	T	SNP	ZNF16	ENST00000276816	human	ensembl	74_37	-1	known	missense	c.460	p.D154N	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF16	HGNC	ENSG00000170631				297	0	0	292	69	19.1136
MSR1	0	genome.wustl.edu	37	8	15978021	15978021	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	15978021	15978021	G	A	SNP	MSR1	ENST00000262101	human	ensembl	74_37	-1	known	silent	c.1128	p.D376	0.196	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	pfam_SRCR,pfam_Macro_scav_rcpt,pfam_Collagen,superfamily_Srcr_rcpt-rel,superfamily_STAT_TF_coiled-coil,smart_Srcr_rcpt-rel,prints_Macro_scav_rcpt,prints_SRCR,pfscan_SRCR	-	no_errors	MSR1	HGNC	ENSG00000038945				129	1	0.769231	107	24	18.3206
MTUS1	0	genome.wustl.edu	37	8	17503472	17503472	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	17503472	17503472	G	A	SNP	MTUS1	ENST00000262102	human	ensembl	74_37	-1	known	missense	c.3776	p.S1259L	0.994	NULL	superfamily_Ferritin-like_SF	-	no_errors	MTUS1	HGNC	ENSG00000129422				36	0	0	41	9	18
CSGALNACT1	0	genome.wustl.edu	37	8	19277935	19277935	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	19277935	19277935	T	C	SNP	CSGALNACT1	ENST00000311540	human	ensembl	74_37	-1	known	missense	c.1048	p.S350G	0.994	pfam_Chond_GalNAc	pfam_Chond_GalNAc	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408				268	0	0	276	56	16.8675
NPM2	0	genome.wustl.edu	37	8	21882970	21882970	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	21882970	21882970	C	T	SNP	NPM2	ENST00000397940	human	ensembl	74_37	+1	known	missense	c.82	p.R28W	0.020	superfamily_Nucleoplasmin_core_dom	superfamily_Nucleoplasmin_core_dom	-	no_errors	NPM2	HGNC	ENSG00000158806				115	0	0	90	17	15.8879
PDLIM2	0	genome.wustl.edu	37	8	22452116	22452116	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	22452116	22452116	G	A	SNP	PDLIM2	ENST00000265810	human	ensembl	74_37	+1	known	missense	c.1055	p.R352Q	0.000	NULL	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDLIM2	HGNC	ENSG00000120913				121	1	0.819672	135	32	19.1617
RHOBTB2	0	genome.wustl.edu	37	8	22868169	22868169	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	22868169	22868169	G	A	SNP	RHOBTB2	ENST00000251822	human	ensembl	74_37	+1	known	missense	c.1739	p.R580H	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB2	HGNC	ENSG00000008853				150	0	0	128	32	20
CHMP7	0	genome.wustl.edu	37	8	23106740	23106740	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	23106740	23106740	G	A	SNP	CHMP7	ENST00000313219	human	ensembl	74_37	+1	known	missense	c.317	p.R106Q	1.000	NULL	pfam_Snf7	-	no_errors	CHMP7	HGNC	ENSG00000147457				111	0	0	106	24	18.4615
ENTPD4	0	genome.wustl.edu	37	8	23291937	23291937	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	23291937	23291937	C	T	SNP	ENTPD4	ENST00000358689	human	ensembl	74_37	-1	known	silent	c.1515	p.S505	0.000	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD4	HGNC	ENSG00000197217				146	0	0	136	19	12.2581
ENTPD4	0	genome.wustl.edu	37	8	23292942	23292942	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	23292942	23292942	C	T	SNP	ENTPD4	ENST00000358689	human	ensembl	74_37	-1	known	missense	c.1423	p.G475R	1.000	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD4	HGNC	ENSG00000197217				69	0	0	74	7	8.64198
ADAM28	0	genome.wustl.edu	37	8	24171018	24171018	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	24171018	24171018	C	T	SNP	ADAM28	ENST00000265769	human	ensembl	74_37	+1	known	silent	c.501	p.S167	0.012	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM28	HGNC	ENSG00000042980				174	1	0.571429	223	34	13.2296
ADAM28	0	genome.wustl.edu	37	8	24187564	24187564	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	24187564	24187564	A	T	SNP	ADAM28	ENST00000265769	human	ensembl	74_37	+1	known	missense	c.1039	p.M347L	0.997	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM28	HGNC	ENSG00000042980				235	0	0	195	41	17.3729
HMBOX1	0	genome.wustl.edu	37	8	28902895	28902895	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	28902895	28902895	A	G	SNP	HMBOX1	ENST00000444075	human	ensembl	74_37	+1	known	missense	c.869	p.Q290R	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_HNF-1_N,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HMBOX1	HGNC	ENSG00000147421				226	0	0	189	10	5.02513
CSMD1	0	genome.wustl.edu	37	8	3245111	3245111	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	3245111	3245111	G	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.2690	p.T897N	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				18	0	0	24	4	14.2857
UNC5D	0	genome.wustl.edu	37	8	35544067	35544067	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	35544067	35544067	T	C	SNP	UNC5D	ENST00000404895	human	ensembl	74_37	+1	known	silent	c.924	p.D308	0.776	superfamily_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ZU5,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Death_domain,pfam_Immunoglobulin,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5D	HGNC	ENSG00000156687				125	0	0	124	35	22.0126
ASH2L	0	genome.wustl.edu	37	8	37967974	37967974	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	37967974	37967974	G	A	SNP	ASH2L	ENST00000343823	human	ensembl	74_37	+1	known	missense	c.479	p.R160Q	1.000	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	-	no_errors	ASH2L	HGNC	ENSG00000129691				149	0	0	143	22	13.3333
WHSC1L1	0	genome.wustl.edu	37	8	38175410	38175410	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	38175410	38175410	G	A	SNP	WHSC1L1	ENST00000525081	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WHSC1L1	HGNC	ENSG00000147548				55	0	0	47	12	20.339
HTRA4	0	genome.wustl.edu	37	8	38840069	38840069	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	38840069	38840069	T	C	SNP	HTRA4	ENST00000302495	human	ensembl	74_37	+1	known	silent	c.1167	p.T389	0.118	superfamily_PDZ,smart_PDZ	pfam_Peptidase_S1,pfam_PDZ,pfam_Kazal_dom,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA4	HGNC	ENSG00000169495				200	0	0	207	38	15.5102
ADAM32	0	genome.wustl.edu	37	8	39131867	39131867	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	39131867	39131867	C	T	SNP	ADAM32	ENST00000379907	human	ensembl	74_37	+1	known	silent	c.2238	p.S746	0.002	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM32	HGNC	ENSG00000197140				141	0	0	130	28	17.7215
ANK1	0	genome.wustl.edu	37	8	41522389	41522389	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	41522389	41522389	G	A	SNP	ANK1	ENST00000314214	human	ensembl	74_37	-1	known	silent	c.153	p.S51	0.783	NULL	NULL	-	no_errors	ANK1	HGNC	ENSG00000029534				34	0	0	36	4	10
HOOK3	0	genome.wustl.edu	37	8	42812253	42812253	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	42812253	42812253	C	A	SNP	HOOK3	ENST00000307602	human	ensembl	74_37	+1	known	missense	c.485	p.S162Y	1.000	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_t-SNARE	-	no_errors	HOOK3	HGNC	ENSG00000168172				93	0	0	93	13	12.2642
HGSNAT	0	genome.wustl.edu	37	8	43048942	43048942	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	43048942	43048942	C	A	SNP	HGSNAT	ENST00000458501	human	ensembl	74_37	+1	known	missense	c.1504	p.L502M	0.950	NULL	pfam_DUF1624	-	no_errors	HGSNAT	HGNC	ENSG00000165102				169	0	0	176	24	12
SPIDR	0	genome.wustl.edu	37	8	48641512	48641512	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	48641512	48641512	G	T	SNP	SPIDR	ENST00000297423	human	ensembl	74_37	+1	known	missense	c.2453	p.G818V	0.002	NULL	NULL	-	no_errors	SPIDR	HGNC	ENSG00000164808				134	0	0	128	12	8.57143
SNAI2	0	genome.wustl.edu	37	8	49832564	49832564	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	49832564	49832564	G	A	SNP	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	silent	c.516	p.G172	0.525	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549				142	0	0	119	33	21.7105
NPBWR1	0	genome.wustl.edu	37	8	53852565	53852565	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	53852565	53852565	C	T	SNP	NPBWR1	ENST00000331251	human	ensembl	74_37	+1	known	missense	c.98	p.P33L	0.300	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Opioid_rcpt	-	no_errors	NPBWR1	HGNC	ENSG00000183729				38	0	0	38	6	13.6364
RP1	0	genome.wustl.edu	37	8	55542602	55542602	+	Missense_Mutation	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	55542602	55542602	C	G	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	missense	c.6160	p.L2054V	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237				153	0	0	160	10	5.88235
TGS1	0	genome.wustl.edu	37	8	56723563	56723563	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	56723563	56723563	A	G	SNP	TGS1	ENST00000260129	human	ensembl	74_37	+1	known	missense	c.2267	p.K756R	0.998	pfam_RNA_cap_Gua-N2-MeTrfase,pfam_RNA_methylase_dom	pfam_RNA_cap_Gua-N2-MeTrfase,pfam_RNA_methylase_dom,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	TGS1	HGNC	ENSG00000137574				273	0	0	282	59	17.3021
NSMAF	0	genome.wustl.edu	37	8	59512542	59512542	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	59512542	59512542	G	A	SNP	NSMAF	ENST00000427130	human	ensembl	74_37	-1	known	missense	c.1412	p.T471M	1.000	pfam_BEACH_dom,superfamily_BEACH_dom,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_WD40_repeat,pfam_GRAM,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,smart_GRAM,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NSMAF	HGNC	ENSG00000035681				184	0	0	162	35	17.7665
TOX	0	genome.wustl.edu	37	8	59872540	59872540	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	59872540	59872540	T	G	SNP	TOX	ENST00000361421	human	ensembl	74_37	-1	known	missense	c.130	p.M44L	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TOX	HGNC	ENSG00000198846				58	0	0	54	12	18.1818
CHD7	0	genome.wustl.edu	37	8	61769375	61769375	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	61769375	61769375	G	A	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	silent	c.7536	p.R2512	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316				182	0	0	226	17	6.99588
CYP7B1	0	genome.wustl.edu	37	8	65527711	65527711	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	65527711	65527711	C	T	SNP	CYP7B1	ENST00000310193	human	ensembl	74_37	-1	known	missense	c.929	p.R310Q	0.994	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	-	no_errors	CYP7B1	HGNC	ENSG00000172817				102	0	0	109	8	6.83761
ADHFE1	0	genome.wustl.edu	37	8	67369066	67369066	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	67369066	67369066	A	G	SNP	ADHFE1	ENST00000396623	human	ensembl	74_37	+1	known	missense	c.1001	p.Y334C	1.000	pfam_ADH_Fe	pfam_ADH_Fe	-	no_errors	ADHFE1	HGNC	ENSG00000147576				104	0	0	99	13	11.6071
C8orf44	0	genome.wustl.edu	37	8	67590095	67590095	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	67590095	67590095	C	T	SNP	C8orf44	ENST00000390159	human	ensembl	74_37	+1	known	missense	c.152	p.A51V	0.003	NULL	NULL	-	no_errors	C8orf44	HGNC	ENSG00000213865				31	0	0	47	4	7.84314
DEFA4	0	genome.wustl.edu	37	8	6794409	6794409	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	6794409	6794409	C	T	SNP	DEFA4	ENST00000297435	human	ensembl	74_37	-1	known	missense	c.13	p.A5T	0.000	pfam_Defensin_propep,pirsf_Alpha-defensin	pfam_Defensin_propep,pfam_Mammalian_defensins,smart_Defensin_beta/neutrophil,pirsf_Alpha-defensin	-	no_errors	DEFA4	HGNC	ENSG00000164821				51	0	0	50	13	20.6349
ARFGEF1	0	genome.wustl.edu	37	8	68170430	68170430	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	68170430	68170430	G	A	SNP	ARFGEF1	ENST00000262215	human	ensembl	74_37	-1	known	silent	c.2331	p.F777	1.000	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF1	HGNC	ENSG00000066777				134	0	0	120	30	20
KCNB2	0	genome.wustl.edu	37	8	73849681	73849681	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	73849681	73849681	C	T	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	silent	c.2091	p.T697	0.001	pfam_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				130	0	0	129	20	13.4228
TCEB1	0	genome.wustl.edu	37	8	74859040	74859040	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	74859040	74859040	T	C	SNP	TCEB1	ENST00000520242	human	ensembl	74_37	-1	known	missense	c.164	p.N55S	1.000	pfam_Skp1_comp_POZ,superfamily_BTB/POZ_fold,smart_Skp1_comp	pfam_Skp1_comp_POZ,superfamily_BTB/POZ_fold,smart_Skp1_comp	-	no_errors	TCEB1	HGNC	ENSG00000154582				104	0	0	108	25	18.797
HNF4G	0	genome.wustl.edu	37	8	76456166	76456166	+	Missense_Mutation	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	76456166	76456166	A	C	SNP	HNF4G	ENST00000396423	human	ensembl	74_37	+1	known	missense	c.209	p.K70T	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4G	HGNC	ENSG00000164749				210	0	0	220	40	15.3846
ZFHX4	0	genome.wustl.edu	37	8	77766792	77766792	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	77766792	77766792	G	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	silent	c.7635	p.P2545	0.001	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				178	0	0	151	35	18.8172
ZFHX4	0	genome.wustl.edu	37	8	77767737	77767737	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	77767737	77767737	C	T	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	silent	c.8580	p.C2860	0.524	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				68	0	0	68	11	13.9241
ZFHX4	0	genome.wustl.edu	37	8	77768336	77768336	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	77768336	77768336	C	T	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.9179	p.A3060V	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				118	0	0	135	22	14.0127
ZBTB10	0	genome.wustl.edu	37	8	81411872	81411872	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	81411872	81411872	A	G	SNP	ZBTB10	ENST00000430430	human	ensembl	74_37	+1	known	silent	c.1116	p.G372	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB10	HGNC	ENSG00000205189				107	0	0	141	16	10.1911
WWP1	0	genome.wustl.edu	37	8	87473498	87473498	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	87473498	87473498	T	C	SNP	WWP1	ENST00000265428	human	ensembl	74_37	+1	known	missense	c.2545	p.F849L	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	WWP1	HGNC	ENSG00000123124				192	0	0	173	22	11.2821
DCAF4L2	0	genome.wustl.edu	37	8	88885973	88885973	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	88885973	88885973	C	T	SNP	DCAF4L2	ENST00000319675	human	ensembl	74_37	-1	known	missense	c.227	p.R76H	0.161	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L2	HGNC	ENSG00000176566				172	0	0	189	14	6.89655
MMP16	0	genome.wustl.edu	37	8	89198806	89198806	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	89198806	89198806	G	A	SNP	MMP16	ENST00000286614	human	ensembl	74_37	-1	known	silent	c.303	p.C101	1.000	pirsf_Pept_M10A_Metazoans,superfamily_Peptidoglycan-bd-like,prints_Pept_M10A	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP16	HGNC	ENSG00000156103				312	0	0	281	81	22.3757
TNKS	0	genome.wustl.edu	37	8	9609295	9609295	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	9609295	9609295	C	T	SNP	TNKS	ENST00000310430	human	ensembl	74_37	+1	known	silent	c.3009	p.A1003	0.370	NULL	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS	HGNC	ENSG00000173273				197	0	0	189	13	6.43564
TDRD7	0	genome.wustl.edu	37	9	100245161	100245161	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	100245161	100245161	G	A	SNP	TDRD7	ENST00000355295	human	ensembl	74_37	+1	known	missense	c.2443	p.A815T	0.000	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD7	HGNC	ENSG00000196116				236	0	0	148	27	15.4286
ANKS6	0	genome.wustl.edu	37	9	101552841	101552841	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	101552841	101552841	T	C	SNP	ANKS6	ENST00000375018	human	ensembl	74_37	-1	known	missense	c.407	p.D136G	0.997	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS6	HGNC	ENSG00000165138				52	0	0	35	16	31.3725
COL15A1	0	genome.wustl.edu	37	9	101787222	101787222	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	101787222	101787222	T	C	SNP	COL15A1	ENST00000375001	human	ensembl	74_37	+1	known	missense	c.1921	p.F641L	0.988	pfam_Collagen	pfam_Collagenase_NC10/endostatin,pfam_Collagen,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL15A1	HGNC	ENSG00000204291				122	0	0	104	21	16.8
KIAA0368	0	genome.wustl.edu	37	9	114137450	114137450	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	114137450	114137450	G	A	SNP	KIAA0368	ENST00000259335	human	ensembl	74_37	-1	known	silent	c.4587	p.G1529	0.655	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA0368	HGNC	ENSG00000136813				76	0	0	55	22	28.5714
KIAA1958	0	genome.wustl.edu	37	9	115421992	115421992	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	115421992	115421992	G	A	SNP	KIAA1958	ENST00000536272	human	ensembl	74_37	+1	known	silent	c.1878	p.T626	0.442	pfam_DUF3504	pfam_DUF3504,superfamily_Integrase_Lambda-type_N	-	no_errors	KIAA1958	HGNC	ENSG00000165185				56	0	0	52	13	20
RGS3	0	genome.wustl.edu	37	9	116246469	116246469	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	116246469	116246469	G	A	SNP	RGS3	ENST00000350696	human	ensembl	74_37	+1	known	missense	c.577	p.V193I	0.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_RGS_dom,pfam_C2_dom,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_C2_dom,superfamily_PDZ,smart_C2_dom,smart_PDZ,smart_Regulat_G_prot_signal_superfam,pfscan_C2_dom,pfscan_PDZ,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS3	HGNC	ENSG00000138835				119	0	0	94	24	20.339
TNC	0	genome.wustl.edu	37	9	117786296	117786296	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	117786296	117786296	G	A	SNP	TNC	ENST00000350763	human	ensembl	74_37	-1	known	missense	c.6451	p.R2151C	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982				262	0	0	182	48	20.8696
ASTN2	0	genome.wustl.edu	37	9	119188284	119188284	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	119188284	119188284	C	T	SNP	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	missense	c.3866	p.R1289H	0.999	NULL	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219				36	0	0	28	9	24.3243
OR1L8	0	genome.wustl.edu	37	9	125330568	125330568	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	125330568	125330568	G	C	SNP	OR1L8	ENST00000304865	human	ensembl	74_37	-1	known	missense	c.189	p.F63L	0.957	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1L8	HGNC	ENSG00000171496				117	0	0	91	21	18.75
RABGAP1	0	genome.wustl.edu	37	9	125748541	125748541	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	125748541	125748541	G	A	SNP	RABGAP1	ENST00000373647	human	ensembl	74_37	+1	known	missense	c.433	p.V145I	1.000	smart_PTB/PI_dom	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454				181	0	0	132	41	23.6994
CRB2	0	genome.wustl.edu	37	9	126125190	126125190	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	126125190	126125190	C	T	SNP	CRB2	ENST00000373631	human	ensembl	74_37	+1	known	silent	c.141	p.C47	0.000	NULL	pfam_EG-like_dom,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	CRB2	HGNC	ENSG00000148204				133	0	0	125	36	22.3602
NR6A1	0	genome.wustl.edu	37	9	127495601	127495601	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	127495601	127495601	A	G	SNP	NR6A1	ENST00000487099	human	ensembl	74_37	-1	known	missense	c.128	p.L43P	0.997	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR6A1	HGNC	ENSG00000148200				229	0	0	156	37	19.171
RABEPK	0	genome.wustl.edu	37	9	127994881	127994881	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	127994881	127994881	T	C	SNP	RABEPK	ENST00000373538	human	ensembl	74_37	+1	known	missense	c.683	p.M228T	1.000	pfam_Kelch_1	pfam_Kelch_2,pfam_Kelch_1	-	no_errors	RABEPK	HGNC	ENSG00000136933				85	0	0	95	9	8.65385
ST6GALNAC6	0	genome.wustl.edu	37	9	130656852	130656852	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	130656852	130656852	C	T	SNP	ST6GALNAC6	ENST00000291839	human	ensembl	74_37	-1	known	missense	c.236	p.R79Q	0.023	NULL	pfam_Glyco_trans_29	-	no_errors	ST6GALNAC6	HGNC	ENSG00000160408				152	0	0	152	12	7.31707
WDR34	0	genome.wustl.edu	37	9	131399202	131399202	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	131399202	131399202	G	A	SNP	WDR34	ENST00000372715	human	ensembl	74_37	-1	known	silent	c.540	p.Y180	0.974	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR34	HGNC	ENSG00000119333				39	0	0	23	5	17.8571
SET	0	genome.wustl.edu	37	9	131456213	131456213	+	Missense_Mutation	SNP	A	A	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	131456213	131456213	A	T	SNP	SET	ENST00000372692	human	ensembl	74_37	+1	known	missense	c.741	p.E247D	0.995	NULL	pfam_NAP_family	-	no_errors	SET	HGNC	ENSG00000119335				111	0	0	93	28	23.1405
SH3GLB2	0	genome.wustl.edu	37	9	131784632	131784632	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	131784632	131784632	C	T	SNP	SH3GLB2	ENST00000372554	human	ensembl	74_37	-1	known	missense	c.134	p.R45Q	1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_BAR_dom-cont,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain	-	no_errors	SH3GLB2	HGNC	ENSG00000148341				48	0	0	38	10	20.8333
DOLPP1	0	genome.wustl.edu	37	9	131847046	131847046	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	131847046	131847046	C	T	SNP	DOLPP1	ENST00000372546	human	ensembl	74_37	+1	known	missense	c.176	p.T59M	1.000	superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	DOLPP1	HGNC	ENSG00000167130				305	0	0	225	65	22.4138
MPDZ	0	genome.wustl.edu	37	9	13217262	13217262	+	Missense_Mutation	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	13217262	13217262	C	A	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	missense	c.1118	p.S373I	0.397	superfamily_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186				50	0	0	36	4	10
ASB6	0	genome.wustl.edu	37	9	132400635	132400635	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	132400635	132400635	T	C	SNP	ASB6	ENST00000277458	human	ensembl	74_37	-1	known	missense	c.700	p.M234V	0.043	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB6	HGNC	ENSG00000148331				84	0	0	93	16	14.6789
FIBCD1	0	genome.wustl.edu	37	9	133779552	133779552	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	133779552	133779552	C	T	SNP	FIBCD1	ENST00000372338	human	ensembl	74_37	-1	known	missense	c.1285	p.A429T	0.998	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FIBCD1	HGNC	ENSG00000130720				157	0	0	133	31	18.9024
PPAPDC3	0	genome.wustl.edu	37	9	134165480	134165480	+	Silent	SNP	C	C	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	134165480	134165480	C	G	SNP	PPAPDC3	ENST00000372264	human	ensembl	74_37	+1	known	silent	c.96	p.G32	0.265	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAPDC3	HGNC	ENSG00000160539				38	0	0	33	8	19.5122
NTNG2	0	genome.wustl.edu	37	9	135102370	135102370	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	135102370	135102370	G	A	SNP	NTNG2	ENST00000360670	human	ensembl	74_37	+1	known	missense	c.992	p.G331D	1.000	smart_EGF_laminin	pfam_Laminin_N,pfam_EGF_laminin,pfam_EGF_extracell,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	NTNG2	HGNC	ENSG00000196358				13	0	0	26	6	18.75
TTF1	0	genome.wustl.edu	37	9	135251548	135251548	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	135251548	135251548	G	A	SNP	TTF1	ENST00000334270	human	ensembl	74_37	-1	known	silent	c.2472	p.I824	1.000	NULL	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	TTF1	HGNC	ENSG00000125482				122	0	0	81	26	24.2991
GTF3C4	0	genome.wustl.edu	37	9	135553527	135553527	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	135553527	135553527	G	A	SNP	GTF3C4	ENST00000372146	human	ensembl	74_37	+1	known	missense	c.521	p.C174Y	1.000	NULL	superfamily_WD40_repeat_dom	-	no_errors	GTF3C4	HGNC	ENSG00000125484				152	0	0	118	34	22.3684
CEL	0	genome.wustl.edu	37	9	135946427	135946427	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	135946427	135946427	C	T	SNP	CEL	ENST00000372080	human	ensembl	74_37	+1	known	missense	c.1547	p.T516M	0.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CEL	HGNC	ENSG00000170835				58	0	0	44	6	12
ADAMTS13	0	genome.wustl.edu	37	9	136304557	136304557	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	136304557	136304557	C	T	SNP	ADAMTS13	ENST00000371929	human	ensembl	74_37	+1	known	silent	c.1776	p.F592	1.000	NULL	pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,superfamily_CUB_dom,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS13	HGNC	ENSG00000160323				181	0	0	168	37	18.0488
TMEM8C	0	genome.wustl.edu	37	9	136389958	136389958	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	136389958	136389958	C	T	SNP	TMEM8C	ENST00000339996	human	ensembl	74_37	-1	known	silent	c.9	p.T3	0.017	pfam_DUF3522	pfam_DUF3522	-	no_errors	TMEM8C	HGNC	ENSG00000187616				73	0	0	65	18	21.6867
SARDH	0	genome.wustl.edu	37	9	136577755	136577755	+	Silent	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	136577755	136577755	A	G	SNP	SARDH	ENST00000371872	human	ensembl	74_37	-1	known	silent	c.1314	p.H438	0.964	NULL	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C	-	no_errors	SARDH	HGNC	ENSG00000123453				53	0	0	40	17	29.8246
COL5A1	0	genome.wustl.edu	37	9	137660308	137660308	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	137660308	137660308	C	T	SNP	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	missense	c.2285	p.P762L	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635				155	0	0	125	15	10.7143
NOTCH1	0	genome.wustl.edu	37	9	139407849	139407849	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	139407849	139407849	A	G	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	missense	c.2348	p.F783S	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400				30	0	0	20	10	33.3333
PHPT1	0	genome.wustl.edu	37	9	139745350	139745350	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	139745350	139745350	G	A	SNP	PHPT1	ENST00000462205	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PHPT1	HGNC	ENSG00000054148				51	0	0	33	5	13.1579
NSMF	0	genome.wustl.edu	37	9	140344457	140344457	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	140344457	140344457	C	T	SNP	NSMF	ENST00000371475	human	ensembl	74_37	-1	known	missense	c.1337	p.R446H	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	NSMF	HGNC	ENSG00000165802				132	0	0	109	27	19.8529
CACNA1B	0	genome.wustl.edu	37	9	140773593	140773593	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	140773593	140773593	G	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	silent	c.372	p.T124	0.754	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				50	0	0	40	6	13.0435
CCDC171	0	genome.wustl.edu	37	9	15678851	15678851	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	15678851	15678851	A	G	SNP	CCDC171	ENST00000380701	human	ensembl	74_37	+1	known	missense	c.1172	p.Y391C	1.000	NULL	superfamily_STAT_TF_coiled-coil	-	no_errors	CCDC171	HGNC	ENSG00000164989				124	0	0	66	15	18.5185
BNC2	0	genome.wustl.edu	37	9	16582983	16582983	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	16582983	16582983	T	C	SNP	BNC2	ENST00000380672	human	ensembl	74_37	-1	known	missense	c.431	p.H144R	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC2	HGNC	ENSG00000173068				280	1	0.355872	199	49	19.7581
DENND4C	0	genome.wustl.edu	37	9	19346646	19346646	+	Missense_Mutation	SNP	T	T	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	19346646	19346646	T	G	SNP	DENND4C	ENST00000602925	human	ensembl	74_37	+1	known	missense	c.3732	p.S1244R	0.999	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4C	HGNC	ENSG00000137145				170	0	0	125	41	24.6988
FOCAD	0	genome.wustl.edu	37	9	20988400	20988400	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	20988400	20988400	C	T	SNP	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	missense	c.4976	p.T1659I	0.004	pfam_DUF3028	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				145	0	0	98	34	25.7576
CDKN2A	0	genome.wustl.edu	37	9	21971133	21971133	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	21971133	21971133	G	A	SNP	CDKN2A	ENST00000361570	human	ensembl	74_37	-1	known	missense	c.391	p.R131C	0.000	NULL	pfam_Cyclin_kinase-Inhib_2A	-	no_errors	CDKN2A	HGNC	ENSG00000147889				15	0	0	9	4	30.7692
LINGO2	0	genome.wustl.edu	37	9	27950586	27950586	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	27950586	27950586	G	A	SNP	LINGO2	ENST00000308675	human	ensembl	74_37	-1	known	silent	c.84	p.C28	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO2	HGNC	ENSG00000174482				83	0	0	67	15	18.2927
DOCK8	0	genome.wustl.edu	37	9	311983	311983	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	311983	311983	C	T	SNP	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	silent	c.558	p.C186	0.436	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099				242	0	0	183	47	20.4348
TMEM215	0	genome.wustl.edu	37	9	32784413	32784413	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	32784413	32784413	C	T	SNP	TMEM215	ENST00000342743	human	ensembl	74_37	+1	known	missense	c.232	p.R78C	1.000	NULL	NULL	-	no_errors	TMEM215	HGNC	ENSG00000188133				101	0	0	94	23	19.6581
PTENP1	0	genome.wustl.edu	37	9	33675379	33675379	+	RNA	SNP	C	C	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	33675379	33675379	C	A	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984				58	0	0	58	12	17.1429
PTENP1	0	genome.wustl.edu	37	9	33675400	33675400	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	33675400	33675400	G	A	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984				85	0	0	89	11	11
KIF24	0	genome.wustl.edu	37	9	34269331	34269331	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	34269331	34269331	T	C	SNP	KIF24	ENST00000379166	human	ensembl	74_37	-1	known	missense	c.1367	p.E456G	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_SAM_type1,superfamily_P-loop_NTPase,superfamily_SAM/pointed,smart_Kinesin_motor_dom,pfscan_SAM,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF24	HGNC	ENSG00000186638				153	1	0.649351	128	38	22.8916
KIAA1161	0	genome.wustl.edu	37	9	34371111	34371111	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	34371111	34371111	G	A	SNP	KIAA1161	ENST00000297625	human	ensembl	74_37	-1	known	missense	c.1729	p.R577W	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	-	no_errors	KIAA1161	HGNC	ENSG00000164976				20	0	0	16	5	23.8095
FBXO10	0	genome.wustl.edu	37	9	37532017	37532017	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	37532017	37532017	C	T	SNP	FBXO10	ENST00000432825	human	ensembl	74_37	-1	known	silent	c.1458	p.A486	0.293	superfamily_Pectin_lyase_fold/virulence,smart_Carb-bd_sugar_hydrolysis-dom,smart_PbH1	pfam_F-box_dom,superfamily_Pectin_lyase_fold/virulence,superfamily_F-box_dom,smart_F-box_dom,smart_PbH1,smart_Carb-bd_sugar_hydrolysis-dom,pfscan_F-box_dom,tigrfam_Para_beta_helix_rpt-2	-	no_errors	FBXO10	HGNC	ENSG00000147912				63	0	0	61	8	11.5942
GLIS3	0	genome.wustl.edu	37	9	4118541	4118541	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	4118541	4118541	C	T	SNP	GLIS3	ENST00000381971	human	ensembl	74_37	-1	known	missense	c.937	p.G313R	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS3	HGNC	ENSG00000107249				98	0	0	117	29	19.863
JAK2	0	genome.wustl.edu	37	9	5065030	5065030	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	5065030	5065030	G	A	SNP	JAK2	ENST00000381652	human	ensembl	74_37	+1	known	missense	c.1204	p.G402S	1.000	pfam_SH2,smart_SH2,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak2,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK2	HGNC	ENSG00000096968				119	0	0	88	23	20.7207
RLN1	0	genome.wustl.edu	37	9	5335449	5335449	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	5335449	5335449	C	T	SNP	RLN1	ENST00000223862	human	ensembl	74_37	-1	known	silent	c.360	p.K120	0.000	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Relaxin	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Relaxin,prints_Insulin_family	-	no_errors	RLN1	HGNC	ENSG00000107018				239	0	0	116	73	38.6243
TMC1	0	genome.wustl.edu	37	9	75420425	75420425	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	75420425	75420425	A	G	SNP	TMC1	ENST00000297784	human	ensembl	74_37	+1	known	missense	c.1694	p.Y565C	1.000	pfam_TMC	pfam_TMC	-	no_errors	TMC1	HGNC	ENSG00000165091				324	1	0.307692	246	77	23.839
ALDH1A1	0	genome.wustl.edu	37	9	75555148	75555148	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	75555148	75555148	C	T	SNP	ALDH1A1	ENST00000297785	human	ensembl	74_37	-1	known	nonsense	c.87	p.W29*	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A1	HGNC	ENSG00000165092				150	0	0	127	22	14.7651
NMRK1	0	genome.wustl.edu	37	9	77681726	77681726	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	77681726	77681726	T	C	SNP	NMRK1	ENST00000361092	human	ensembl	74_37	-1	known	missense	c.527	p.D176G	1.000	prints_Uridine_kinase	superfamily_P-loop_NTPase,prints_Uridine_kinase	-	no_errors	NMRK1	HGNC	ENSG00000106733				203	0	0	164	38	18.8119
TMEM261	0	genome.wustl.edu	37	9	7798583	7798583	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	7798583	7798583	C	T	SNP	TMEM261	ENST00000358227	human	ensembl	74_37	-1	known	missense	c.329	p.R110H	0.021	NULL	NULL	-	no_errors	TMEM261	HGNC	ENSG00000137038				105	0	0	94	20	17.5439
PRUNE2	0	genome.wustl.edu	37	9	79322121	79322121	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	79322121	79322121	T	C	SNP	PRUNE2	ENST00000428286	human	ensembl	74_37	-1	known	missense	c.3992	p.D1331G	0.004	NULL	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	PRUNE2	HGNC	ENSG00000106772				98	0	0	99	20	16.8067
PTPRD	0	genome.wustl.edu	37	9	8465548	8465548	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	8465548	8465548	T	C	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.3632	p.Y1211C	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707				288	0	0	206	58	21.9697
KIF27	0	genome.wustl.edu	37	9	86457221	86457221	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	86457221	86457221	G	A	SNP	KIF27	ENST00000297814	human	ensembl	74_37	-1	known	missense	c.3652	p.R1218W	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF27	HGNC	ENSG00000165115				120	0	0	85	27	24.1071
HABP4	0	genome.wustl.edu	37	9	99250411	99250411	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	99250411	99250411	G	A	SNP	HABP4	ENST00000375249	human	ensembl	74_37	+1	known	missense	c.1040	p.R347Q	1.000	NULL	pfam_HABP4_PAIRBP1-bd	-	no_errors	HABP4	HGNC	ENSG00000130956				135	0	0	88	30	25.4237
ARL13A	0	genome.wustl.edu	37	X	100243452	100243452	+	Missense_Mutation	SNP	G	G	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	100243452	100243452	G	C	SNP	ARL13A	ENST00000450457	human	ensembl	74_37	+1	known	missense	c.830	p.R277T	0.003	NULL	pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,prints_Small_GTPase_ARF/SAR	-	no_errors	ARL13A	HGNC	ENSG00000174225				57	0	0	20	7	25.9259
BHLHB9	0	genome.wustl.edu	37	X	102004167	102004167	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	102004167	102004167	G	A	SNP	BHLHB9	ENST00000361229	human	ensembl	74_37	+1	known	missense	c.244	p.G82S	0.000	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	BHLHB9	HGNC	ENSG00000198908				108	0	0	72	19	20.8791
C1GALT1C1	0	genome.wustl.edu	37	X	119760722	119760722	+	Silent	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	119760722	119760722	G	A	SNP	C1GALT1C1	ENST00000304661	human	ensembl	74_37	-1	known	silent	c.300	p.F100	1.000	NULL	NULL	-	no_errors	C1GALT1C1	HGNC	ENSG00000171155				287	0	0	174	18	9.375
THOC2	0	genome.wustl.edu	37	X	122759791	122759791	+	Missense_Mutation	SNP	T	T	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	122759791	122759791	T	A	SNP	THOC2	ENST00000245838	human	ensembl	74_37	-1	known	missense	c.3029	p.N1010I	1.000	pfam_THO_THOC2_C	pfam_THO_THOC2_C,pfam_THO_THOC2_N	-	no_errors	THOC2	HGNC	ENSG00000125676				219	0	0	133	35	20.8333
TENM1	0	genome.wustl.edu	37	X	123695633	123695633	+	Silent	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	123695633	123695633	T	C	SNP	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	silent	c.2322	p.R774	0.992	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694				204	0	0	134	45	25.1397
AIFM1	0	genome.wustl.edu	37	X	129272624	129272624	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	129272624	129272624	G	A	SNP	AIFM1	ENST00000287295	human	ensembl	74_37	-1	known	missense	c.911	p.T304M	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_OxRdtase_NAD-bd_dom,prints_FAD_pyr_nucl-diS_OxRdtase	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_OxRdtase_NAD-bd_dom,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_FAD_pyr_nucl-diS_OxRdtase	-	no_errors	AIFM1	HGNC	ENSG00000156709				196	0	0	77	30	28.0374
USP26	0	genome.wustl.edu	37	X	132161368	132161368	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	132161368	132161368	C	T	SNP	USP26	ENST00000370832	human	ensembl	74_37	-1	known	missense	c.881	p.C294Y	0.032	pfam_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP26	HGNC	ENSG00000134588				153	1	0.649351	132	11	7.69231
FAM127A	0	genome.wustl.edu	37	X	134166475	134166475	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	134166475	134166475	G	A	SNP	FAM127A	ENST00000257013	human	ensembl	74_37	+1	novel	missense	c.62	p.R21H	0.001	NULL	NULL	-	no_errors	FAM127A	HGNC	ENSG00000134590				96	0	0	77	6	7.22892
FAM127B	0	genome.wustl.edu	37	X	134186202	134186202	+	RNA	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	134186202	134186202	G	A	SNP	FAM127B	ENST00000520964	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	FAM127B	HGNC	ENSG00000203950				21	0	0	16	8	33.3333
ZNF449	0	genome.wustl.edu	37	X	134494414	134494414	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	134494414	134494414	C	T	SNP	ZNF449	ENST00000339249	human	ensembl	74_37	+1	known	nonsense	c.970	p.R324*	0.107	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF449	HGNC	ENSG00000173275				202	0	0	91	22	19.469
GPR112	0	genome.wustl.edu	37	X	135494507	135494507	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	135494507	135494507	C	T	SNP	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	nonsense	c.9019	p.R3007*	0.008	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920				90	0	0	65	5	7.14286
GABRA3	0	genome.wustl.edu	37	X	151366116	151366116	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	151366116	151366116	C	T	SNP	GABRA3	ENST00000370314	human	ensembl	74_37	-1	known	missense	c.920	p.R307H	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABBAa3_rcpt,prints_GABAA_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRA3	HGNC	ENSG00000011677				111	0	0	69	22	24.1758
PNMA3	0	genome.wustl.edu	37	X	152226635	152226635	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	152226635	152226635	G	A	SNP	PNMA3	ENST00000370264	human	ensembl	74_37	+1	known	missense	c.1223	p.R408Q	0.000	superfamily_Znf_CCHC	superfamily_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	PNMA3	HGNC	ENSG00000183837				159	0	0	84	33	28.2051
HAUS7	0	genome.wustl.edu	37	X	152721027	152721027	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	152721027	152721027	C	T	SNP	HAUS7	ENST00000421080	human	ensembl	74_37	-1	known	missense	c.398	p.R133H	0.016	NULL	NULL	-	no_errors	HAUS7	HGNC	ENSG00000213397				48	0	0	33	13	28.2609
PHKA2	0	genome.wustl.edu	37	X	18913264	18913264	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	18913264	18913264	T	C	SNP	PHKA2	ENST00000379942	human	ensembl	74_37	-1	known	missense	c.3328	p.T1110A	0.998	NULL	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA2	HGNC	ENSG00000044446				227	0	0	141	38	21.2291
ZFX	0	genome.wustl.edu	37	X	24229411	24229411	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	24229411	24229411	A	G	SNP	ZFX	ENST00000540034	human	ensembl	74_37	+1	known	missense	c.2453	p.E818G	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Transcrp_activ_Zfx/Zfy-dom,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFX	HGNC	ENSG00000005889				277	0	0	141	63	30.8824
MAGEB1	0	genome.wustl.edu	37	X	30268697	30268697	+	Silent	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	30268697	30268697	C	T	SNP	MAGEB1	ENST00000378981	human	ensembl	74_37	+1	known	silent	c.87	p.H29	0.101	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB1	HGNC	ENSG00000214107				30	0	0	16	6	27.2727
DMD	0	genome.wustl.edu	37	X	31164461	31164461	+	Missense_Mutation	SNP	C	C	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	31164461	31164461	C	T	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.10868	p.S3623N	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				105	0	0	73	32	30.4762
CXorf36	0	genome.wustl.edu	37	X	45051067	45051067	+	Missense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	45051067	45051067	G	T	SNP	CXorf36	ENST00000398000	human	ensembl	74_37	-1	known	missense	c.427	p.R143S	0.792	NULL	NULL	-	no_errors	CXorf36	HGNC	ENSG00000147113				205	1	0.485437	152	32	17.3913
SLC9A7	0	genome.wustl.edu	37	X	46513103	46513103	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	46513103	46513103	G	A	SNP	SLC9A7	ENST00000328306	human	ensembl	74_37	-1	known	missense	c.1085	p.A362V	0.997	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_6,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A7	HGNC	ENSG00000065923				131	0	0	86	24	21.8182
CDK16	0	genome.wustl.edu	37	X	47085414	47085414	+	Missense_Mutation	SNP	G	G	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	47085414	47085414	G	A	SNP	CDK16	ENST00000276052	human	ensembl	74_37	+1	known	missense	c.1002	p.M334I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK16	HGNC	ENSG00000102225				23	0	0	15	4	21.0526
MAGED1	0	genome.wustl.edu	37	X	51638686	51638686	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	51638686	51638686	A	G	SNP	MAGED1	ENST00000375695	human	ensembl	74_37	+1	known	missense	c.751	p.T251A	0.558	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222				32	0	0	19	6	24
SSX7	0	genome.wustl.edu	37	X	52677309	52677309	+	Splice_Site	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	52677309	52677309	A	G	SNP	SSX7	ENST00000298181	human	ensembl	74_37	-1	known	splice_site	c.466+2	e5+2	0.013	-	-	-	no_errors	SSX7	HGNC	ENSG00000187754				286	0	0	175	61	25.8475
LAS1L	0	genome.wustl.edu	37	X	64749749	64749749	+	Missense_Mutation	SNP	A	A	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	64749749	64749749	A	G	SNP	LAS1L	ENST00000374811	human	ensembl	74_37	-1	known	missense	c.524	p.F175S	0.861	pfam_Las1	pfam_Las1	-	no_errors	LAS1L	HGNC	ENSG00000001497				142	0	0	74	20	21.2766
MIR325	0	genome.wustl.edu	37	X	76225900	76225900	+	RNA	SNP	A	A	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	76225900	76225900	A	C	SNP	MIR325	ENST00000385260	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.239	-	-	-	no_errors	MIR325	HGNC	ENSG00000207995				327	0	0	150	43	22.2798
PGAM4	0	genome.wustl.edu	37	X	77224579	77224579	+	Missense_Mutation	SNP	T	T	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	77224579	77224579	T	C	SNP	PGAM4	ENST00000458128	human	ensembl	74_37	-1	known	missense	c.557	p.H186R	1.000	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,tigrfam_Phosphogly_mut1	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,tigrfam_Phosphogly_mut1	-	no_errors	PGAM4	HGNC	ENSG00000226784				306	0	0	154	67	30.3167
CYLC1	0	genome.wustl.edu	37	X	83141586	83141586	+	Silent	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	83141586	83141586	G	T	SNP	CYLC1	ENST00000329312	human	ensembl	74_37	+1	known	silent	c.1950	p.L650	0.984	NULL	NULL	-	no_errors	CYLC1	HGNC	ENSG00000183035				187	0	0	113	26	18.705
PCDH11X	0	genome.wustl.edu	37	X	91133388	91133388	+	Nonsense_Mutation	SNP	G	G	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	91133388	91133388	G	T	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	nonsense	c.2149	p.G717*	0.987	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290				182	0	0	110	33	23.0769
DBT	0	genome.wustl.edu	37	1	100684226	100684226	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	100684226	100684226	T	-	DEL	DBT	ENST00000370132	human	ensembl	74_37	-1	known	frame_shift_del	c.511	p.T171fs	1.000	pfam_E3-bd,superfamily_E3-bd	pfam_2-oxoacid_DH_actylTfrase,pfam_Biotin_lipoyl,pfam_E3-bd,superfamily_Single_hybrid_motif,superfamily_E3-bd,pfscan_Biotin_lipoyl	-	no_errors	DBT	HGNC	ENSG00000137992				363	0	0	286	58	16.8605
MTOR	0	genome.wustl.edu	37	1	11273546	11273547	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	11273546	11273547	-	C	INS	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	frame_shift_ins	c.3195_3194	p.E1066fs	0.918:1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793				159	0	0	125	28	18.3007
MIIP	0	genome.wustl.edu	37	1	12089171	12089173	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	12089171	12089173	AGG	-	DEL	MIIP	ENST00000235332	human	ensembl	74_37	+1	known	in_frame_del	c.629_631	p.E212in_frame_del	0.955:0.994:1.000	NULL	NULL	-	no_errors	MIIP	HGNC	ENSG00000116691				57	0	0	64	5	7.24638
AADACL3	0	genome.wustl.edu	37	1	12785494	12785494	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	12785494	12785494	G	-	DEL	AADACL3	ENST00000359318	human	ensembl	74_37	+1	known	frame_shift_del	c.584	p.C195fs	0.040	NULL	pfam_AB_hydrolase_3	-	no_errors	AADACL3	HGNC	ENSG00000188984				331	0	0	321	50	13.4771
BCL9	0	genome.wustl.edu	37	1	147091501	147091501	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	147091501	147091501	C	-	DEL	BCL9	ENST00000234739	human	ensembl	74_37	+1	known	frame_shift_del	c.1540	p.P516fs	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128				166	0	0	137	61	30.8081
SV2A	0	genome.wustl.edu	37	1	149884981	149884981	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	149884981	149884981	C	-	DEL	SV2A	ENST00000369146	human	ensembl	74_37	-1	known	frame_shift_del	c.412	p.E138fs	0.998	tigrfam_SV2	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2A	HGNC	ENSG00000159164				75	0	0	93	18	16.2162
MTMR11	0	genome.wustl.edu	37	1	149900986	149900988	+	RNA	DEL	AAA	AAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	149900986	149900988	AAA	-	DEL	MTMR11	ENST00000466496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.002:0.003	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				111	0	0	94	20	17.5439
RPRD2	0	genome.wustl.edu	37	1	150445612	150445612	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	150445612	150445612	C	-	DEL	RPRD2	ENST00000369068	human	ensembl	74_37	+1	known	frame_shift_del	c.4188	p.L1399fs	0.993	NULL	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,superfamily_Ricin_B_lectin,smart_CID_dom	-	no_errors	RPRD2	HGNC	ENSG00000163125				98	0	0	91	9	9
TNFAIP8L2	0	genome.wustl.edu	37	1	151131332	151131333	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	151131332	151131333	-	C	INS	TNFAIP8L2	ENST00000368910	human	ensembl	74_37	+1	known	frame_shift_ins	c.159_160	p.Q54fs	0.989:0.969	pfam_DUF758	pfam_DUF758	-	no_errors	TNFAIP8L2	HGNC	ENSG00000163154				72	0	0	76	9	10.5882
CHTOP	0	genome.wustl.edu	37	1	153617576	153617581	+	In_Frame_Del	DEL	GAGGCC	GAGGCC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GAGGCC	GAGGCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	153617576	153617581	GAGGCC	-	DEL	CHTOP	ENST00000368694	human	ensembl	74_37	+1	known	in_frame_del	c.578_583	p.RG197in_frame_del	1.000:0.977:0.997:0.991:0.063:0.056	NULL	NULL	-	no_errors	CHTOP	HGNC	ENSG00000160679				95	0	0	84	8	8.69565
UBE2Q1	0	genome.wustl.edu	37	1	154524458	154524459	+	RNA	DEL	GA	GA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	154524458	154524459	GA	-	DEL	UBE2Q1	ENST00000474181	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.187:0.017	-	-	-	no_errors	UBE2Q1	HGNC	ENSG00000160714				80	0	0	103	22	17.6
EFNA3	0	genome.wustl.edu	37	1	155059036	155059036	+	RNA	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	155059036	155059036	G	-	DEL	EFNA3	ENST00000470294	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EFNA3	HGNC	ENSG00000143590				115	0	0	104	21	16.8
ASH1L	0	genome.wustl.edu	37	1	155308000	155308000	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	155308000	155308000	T	-	DEL	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	frame_shift_del	c.8698	p.T2900fs	0.002	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				308	2	0.645161	224	62	21.6783
INSRR	0	genome.wustl.edu	37	1	156819062	156819062	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	156819062	156819062	G	-	DEL	INSRR	ENST00000368195	human	ensembl	74_37	-1	known	frame_shift_del	c.1420	p.R474fs	0.970	pirsf_Tyr_kinase_insulin-like_rcpt	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSRR	HGNC	ENSG00000027644				102	0	0	83	21	20.1923
KIRREL	0	genome.wustl.edu	37	1	158058203	158058203	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	158058203	158058203	C	-	DEL	KIRREL	ENST00000368173	human	ensembl	74_37	+1	known	frame_shift_del	c.1003	p.L337fs	1.000	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL	HGNC	ENSG00000183853				182	0	0	161	32	16.5803
POU2F1	0	genome.wustl.edu	37	1	167385179	167385181	+	RNA	DEL	AAA	AAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	167385179	167385181	AAA	-	DEL	POU2F1	ENST00000367865	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.090:0.002:0.000	-	-	-	no_errors	POU2F1	HGNC	ENSG00000143190				13	0	0	11	4	26.6667
PAPPA2	0	genome.wustl.edu	37	1	176762723	176762724	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	176762723	176762724	-	C	INS	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	frame_shift_ins	c.5048_5049	p.S1686fs	0.498:0.506	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183				114	0	0	100	15	13.0435
KIAA1614	0	genome.wustl.edu	37	1	180904834	180904835	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	180904834	180904835	AC	-	DEL	KIAA1614	ENST00000367588	human	ensembl	74_37	+1	known	frame_shift_del	c.1789_1790	p.I599fs	0.999:0.996	NULL	NULL	-	no_errors	KIAA1614	HGNC	ENSG00000135835				38	0	0	34	6	15
HMCN1	0	genome.wustl.edu	37	1	186083133	186083133	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	186083133	186083133	C	-	DEL	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	frame_shift_del	c.11154	p.Q3720fs	0.991	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				418	0	0	350	51	12.7182
UBR4	0	genome.wustl.edu	37	1	19467923	19467923	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	19467923	19467923	G	-	DEL	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	frame_shift_del	c.8406	p.M2803fs	0.484	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481				100	0	0	111	9	7.5
DDX59	0	genome.wustl.edu	37	1	200594042	200594042	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	200594042	200594042	T	-	DEL	DDX59	ENST00000447706	human	ensembl	74_37	-1	known	frame_shift_del	c.1730	p.N577fs	0.001	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197				195	0	0	127	25	16.4474
PTPN7	0	genome.wustl.edu	37	1	202128473	202128473	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	202128473	202128473	C	-	DEL	PTPN7	ENST00000309017	human	ensembl	74_37	-1	known	frame_shift_del	c.373	p.A125fs	0.995	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN7	HGNC	ENSG00000143851				50	0	0	44	13	22.807
LAMB3	0	genome.wustl.edu	37	1	209790820	209790820	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	209790820	209790820	C	-	DEL	LAMB3	ENST00000356082	human	ensembl	74_37	-1	known	frame_shift_del	c.3163	p.A1055fs	0.980	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB3	HGNC	ENSG00000196878				138	0	0	107	14	11.5702
PROX1	0	genome.wustl.edu	37	1	214178556	214178556	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	214178556	214178556	T	-	DEL	PROX1	ENST00000261454	human	ensembl	74_37	+1	known	frame_shift_del	c.1774	p.Y594fs	1.000	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	-	no_errors	PROX1	HGNC	ENSG00000117707				160	0	0	104	18	14.7541
USP48	0	genome.wustl.edu	37	1	22033386	22033388	+	In_Frame_Del	DEL	AAA	AAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	22033386	22033388	AAA	-	DEL	USP48	ENST00000529637	human	ensembl	74_37	-1	novel	in_frame_del	c.1975_1973	p.F658in_frame_del	0.000:0.000:0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67,pfscan_Ubiquitin_supergroup	-	no_errors	USP48	HGNC	ENSG00000090686				63	0	0	57	25	30.4878
TP53BP2	0	genome.wustl.edu	37	1	223998198	223998199	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	223998198	223998199	GA	-	DEL	TP53BP2	ENST00000343537	human	ensembl	74_37	-1	known	frame_shift_del	c.307_306	p.Q103fs	0.998:0.882	NULL	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	TP53BP2	HGNC	ENSG00000143514				34	0	0	25	7	21.875
TP53BP2	0	genome.wustl.edu	37	1	224001956	224001956	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	224001956	224001956	G	-	DEL	TP53BP2	ENST00000343537	human	ensembl	74_37	-1	known	frame_shift_del	c.275	p.P92fs	0.998	NULL	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	TP53BP2	HGNC	ENSG00000143514				177	0	0	141	32	18.4971
C1QA	0	genome.wustl.edu	37	1	22965531	22965531	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	22965531	22965531	C	-	DEL	C1QA	ENST00000374642	human	ensembl	74_37	+1	known	frame_shift_del	c.369	p.P125fs	0.886	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QA	HGNC	ENSG00000173372				43	0	0	38	13	25.4902
CHRM3	0	genome.wustl.edu	37	1	240072444	240072444	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	240072444	240072444	A	-	DEL	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	frame_shift_del	c.1693	p.K567fs	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019				117	0	0	78	19	19.5876
TCEB3	0	genome.wustl.edu	37	1	24078404	24078404	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	24078404	24078404	A	-	DEL	TCEB3	ENST00000418390	human	ensembl	74_37	+1	known	frame_shift_del	c.1387	p.N465fs	0.998	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,pfscan_F-box_dom	-	no_errors	TCEB3	HGNC	ENSG00000011007				237	0	0	189	43	18.5345
OR2M4	0	genome.wustl.edu	37	1	248402758	248402758	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	248402758	248402758	C	-	DEL	OR2M4	ENST00000306687	human	ensembl	74_37	+1	known	frame_shift_del	c.528	p.F178fs	0.008	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M4	HGNC	ENSG00000171180				379	0	0	271	57	17.378
OR14I1	0	genome.wustl.edu	37	1	248844882	248844882	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	248844882	248844882	G	-	DEL	OR14I1	ENST00000342623	human	ensembl	74_37	-1	known	frame_shift_del	c.724	p.Q242fs	0.920	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Olfact_rcpt	-	no_errors	OR14I1	HGNC	ENSG00000189181				159	0	0	125	27	17.7632
TMEM57	0	genome.wustl.edu	37	1	25775375	25775375	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	25775375	25775375	T	-	DEL	TMEM57	ENST00000374343	human	ensembl	74_37	+1	known	frame_shift_del	c.299	p.F102fs	1.000	pfam_Macoilin	pfam_Macoilin,superfamily_Prefoldin	-	no_errors	TMEM57	HGNC	ENSG00000204178				158	1	0.628931	145	32	18.0791
AUNIP	0	genome.wustl.edu	37	1	26163989	26163992	+	Frame_Shift_Del	DEL	CTTT	CTTT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTTT	CTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	26163989	26163992	CTTT	-	DEL	AUNIP	ENST00000538789	human	ensembl	74_37	-1	known	frame_shift_del	c.135_132	p.K45fs	0.057:0.157:0.174:0.281	NULL	NULL	-	no_errors	AUNIP	HGNC	ENSG00000127423				177	0	0	132	19	12.5828
ARID1A	0	genome.wustl.edu	37	1	27101612	27101612	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	27101612	27101612	C	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.4894	p.M1634fs	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				137	0	0	128	22	14.6667
WDTC1	0	genome.wustl.edu	37	1	27621108	27621108	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	27621108	27621108	G	-	DEL	WDTC1	ENST00000319394	human	ensembl	74_37	+1	known	frame_shift_del	c.861	p.E290fs	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784				65	0	0	40	13	24.5283
NCDN	0	genome.wustl.edu	37	1	36026091	36026092	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	36026091	36026092	-	T	INS	NCDN	ENST00000356090	human	ensembl	74_37	+1	known	frame_shift_ins	c.339_340	p.C114fs	1.000:1.000	NULL	NULL	-	no_errors	NCDN	HGNC	ENSG00000020129				235	0	0	199	57	22.2656
CCDC27	0	genome.wustl.edu	37	1	3688025	3688025	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	3688025	3688025	C	-	DEL	CCDC27	ENST00000294600	human	ensembl	74_37	+1	known	frame_shift_del	c.1909	p.L639fs	0.211	NULL	superfamily_Prefoldin	-	no_errors	CCDC27	HGNC	ENSG00000162592				144	0	0	128	9	6.56934
ENSG00000236546	0	genome.wustl.edu	37	1	40363690	40363693	+	RNA	DEL	ACAA	ACAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	ACAA	ACAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	40363690	40363693	ACAA	-	DEL	ENSG00000236546	ENST00000418255	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.001:0.000:0.000	-	-	-	no_errors	RP1-118J21.5	Clone_based_vega_gene	ENSG00000236546				46	0	0	63	10	13.6986
MED8	0	genome.wustl.edu	37	1	43850143	43850143	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	43850143	43850143	T	-	DEL	MED8	ENST00000290663	human	ensembl	74_37	-1	known	frame_shift_del	c.884	p.N295fs	0.000	NULL	pfam_Mediatior_Med8_fun/met	-	no_errors	MED8	HGNC	ENSG00000159479				25	0	0	12	7	36.8421
UROD	0	genome.wustl.edu	37	1	45479967	45479967	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	45479967	45479967	T	-	DEL	UROD	ENST00000472254	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	UROD	HGNC	ENSG00000126088				47	0	0	26	26	50
TSPAN1	0	genome.wustl.edu	37	1	46650191	46650192	+	RNA	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	46650191	46650192	-	G	INS	TSPAN1	ENST00000482143	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TSPAN1	HGNC	ENSG00000117472				160	0	0	131	37	22.0238
TXNDC12	0	genome.wustl.edu	37	1	52493022	52493023	+	Splice_Site	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	52493022	52493023	-	G	INS	TXNDC12	ENST00000371626	human	ensembl	74_37	-1	known	splice_site_ins	c.212-3_212-2	e4-2	0.998:0.000	-	-	-	no_errors	TXNDC12	HGNC	ENSG00000117862				112	0	0	102	10	8.92857
PRPF38A	0	genome.wustl.edu	37	1	52882466	52882466	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	52882466	52882466	T	-	DEL	PRPF38A	ENST00000474048	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.163	-	-	-	no_errors	PRPF38A	HGNC	ENSG00000134748				29	0	0	22	3	12
PODN	0	genome.wustl.edu	37	1	53543377	53543377	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	53543377	53543377	C	-	DEL	PODN	ENST00000312553	human	ensembl	74_37	+1	known	frame_shift_del	c.903	p.P303fs	0.997	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PODN	HGNC	ENSG00000174348				249	0	0	207	24	10.3896
PODN	0	genome.wustl.edu	37	1	53544350	53544350	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	53544350	53544350	A	-	DEL	PODN	ENST00000312553	human	ensembl	74_37	+1	known	frame_shift_del	c.1312	p.N438fs	1.000	NULL	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PODN	HGNC	ENSG00000174348				220	0	0	179	23	11.3861
TMEM59	0	genome.wustl.edu	37	1	54502396	54502396	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	54502396	54502396	A	-	DEL	TMEM59	ENST00000470395	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM59	HGNC	ENSG00000116209				30	0	0	27	7	20.5882
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251				94	0	0	70	13	15.6627
USP1	0	genome.wustl.edu	37	1	62916272	62916272	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	62916272	62916272	A	-	DEL	USP1	ENST00000339950	human	ensembl	74_37	+1	known	frame_shift_del	c.1978	p.N662fs	1.000	pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP1	HGNC	ENSG00000162607				141	0	0	105	34	24.4604
ANGPTL3	0	genome.wustl.edu	37	1	63063625	63063626	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	63063625	63063626	-	A	INS	ANGPTL3	ENST00000371129	human	ensembl	74_37	+1	known	frame_shift_ins	c.388_389	p.I132fs	1.000:1.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPTL3	HGNC	ENSG00000132855				113	0	0	92	29	23.9669
JAK1	0	genome.wustl.edu	37	1	65311293	65311293	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	65311293	65311293	C	-	DEL	JAK1	ENST00000342505	human	ensembl	74_37	-1	known	frame_shift_del	c.2018	p.G673fs	1.000	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak1,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	JAK1	HGNC	ENSG00000162434				259	0	0	206	32	13.4454
C1orf141	0	genome.wustl.edu	37	1	67561988	67561988	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	67561988	67561988	T	-	DEL	C1orf141	ENST00000371006	human	ensembl	74_37	-1	known	frame_shift_del	c.363	p.K121fs	0.000	NULL	NULL	-	no_errors	C1orf141	HGNC	ENSG00000203963				65	0	0	40	7	14.8936
LRRIQ3	0	genome.wustl.edu	37	1	74575213	74575213	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	74575213	74575213	T	-	DEL	LRRIQ3	ENST00000354431	human	ensembl	74_37	-1	known	frame_shift_del	c.732	p.K244fs	0.004	pfscan_IQ_motif_EF-hand-BS	pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ3	HGNC	ENSG00000162620				135	1	0.735294	91	34	27.2
FUBP1	0	genome.wustl.edu	37	1	78426185	78426185	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	78426185	78426185	A	-	DEL	FUBP1	ENST00000470287	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.567	-	-	-	no_errors	FUBP1	HGNC	ENSG00000162613				25	0	0	23	3	11.5385
PRKACB	0	genome.wustl.edu	37	1	84647913	84647913	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	84647913	84647913	A	-	DEL	PRKACB	ENST00000370685	human	ensembl	74_37	+1	known	frame_shift_del	c.280	p.T96fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACB	HGNC	ENSG00000142875				133	0	0	85	19	18.2692
PKN2	0	genome.wustl.edu	37	1	89206848	89206848	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	89206848	89206848	A	-	DEL	PKN2	ENST00000370521	human	ensembl	74_37	+1	known	frame_shift_del	c.226	p.S78fs	1.000	pfam_HR1_rho-bd,superfamily_HR1_rho-bd,smart_HR1_rho-bd	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN2	HGNC	ENSG00000065243				71	0	0	55	10	15.3846
GBP1	0	genome.wustl.edu	37	1	89523904	89523904	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	89523904	89523904	T	-	DEL	GBP1	ENST00000370473	human	ensembl	74_37	-1	known	frame_shift_del	c.645	p.D216fs	0.001	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP1	HGNC	ENSG00000117228				511	0	0	421	82	16.3022
GBP7	0	genome.wustl.edu	37	1	89613321	89613322	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	89613321	89613322	-	C	INS	GBP7	ENST00000294671	human	ensembl	74_37	-1	known	frame_shift_ins	c.1294_1293	p.H431fs	0.980:0.994	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP7	HGNC	ENSG00000213512				311	0	0	249	42	14.433
MTF2	0	genome.wustl.edu	37	1	93599280	93599280	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	93599280	93599280	A	-	DEL	MTF2	ENST00000370298	human	ensembl	74_37	+1	known	frame_shift_del	c.1181	p.G397fs	0.994	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MTF2	HGNC	ENSG00000143033				81	0	0	63	14	18.1818
MTF2	0	genome.wustl.edu	37	1	93602676	93602679	+	RNA	DEL	AAAA	AAAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	93602676	93602679	AAAA	-	DEL	MTF2	ENST00000467953	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.997:0.993:0.908	-	-	-	no_errors	MTF2	HGNC	ENSG00000143033				32	0	0	23	7	23.3333
DPYD	0	genome.wustl.edu	37	1	98165042	98165043	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	1	98165042	98165043	-	T	INS	DPYD	ENST00000370192	human	ensembl	74_37	-1	known	frame_shift_ins	c.545_544	p.M182fs	1.000:1.000	superfamily_Helical_ferredxn	pfam_Dihydroorotate_DH_1_2,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_tRNA_hU_synthase,superfamily_Helical_ferredxn,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_Dihydroorotate_DH	-	no_errors	DPYD	HGNC	ENSG00000188641				387	0	0	278	50	15.2439
CWF19L1	0	genome.wustl.edu	37	10	101992924	101992926	+	RNA	DEL	AAA	AAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	101992924	101992926	AAA	-	DEL	CWF19L1	ENST00000468709	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.167:0.180:0.200	-	-	-	no_errors	CWF19L1	HGNC	ENSG00000095485				94	0	0	47	26	35.6164
SEC31B	0	genome.wustl.edu	37	10	102265160	102265160	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	102265160	102265160	T	-	DEL	SEC31B	ENST00000370345	human	ensembl	74_37	-1	known	frame_shift_del	c.1137	p.K379fs	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31B	HGNC	ENSG00000075826				375	0	0	305	56	15.5125
C10orf2	0	genome.wustl.edu	37	10	102748985	102748985	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	102748985	102748985	C	-	DEL	C10orf2	ENST00000311916	human	ensembl	74_37	+1	known	frame_shift_del	c.1018	p.R341fs	1.000	superfamily_P-loop_NTPase	pfam_Circ_KaiC/RadA,pfam_DNA_helicase_DnaB-like_C,superfamily_P-loop_NTPase,pfscan_DNA_helicase_DnaB-like_C	-	no_errors	C10orf2	HGNC	ENSG00000107815				105	0	0	112	16	12.5
GBF1	0	genome.wustl.edu	37	10	104120909	104120909	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	104120909	104120909	A	-	DEL	GBF1	ENST00000476019	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GBF1	HGNC	ENSG00000107862				104	0	0	73	39	34.8214
CYP17A1	0	genome.wustl.edu	37	10	104593888	104593889	+	RNA	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	104593888	104593889	-	A	INS	CYP17A1	ENST00000489268	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.045:0.620	-	-	-	no_errors	CYP17A1	HGNC	ENSG00000148795				88	0	0	43	10	18.8679
COL17A1	0	genome.wustl.edu	37	10	105819448	105819448	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	105819448	105819448	T	-	DEL	COL17A1	ENST00000353479	human	ensembl	74_37	-1	known	frame_shift_del	c.1170	p.E391fs	0.999	NULL	pfam_Collagen	-	no_errors	COL17A1	HGNC	ENSG00000065618				247	0	0	169	11	6.11111
ADD3	0	genome.wustl.edu	37	10	111893350	111893350	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	111893350	111893350	A	-	DEL	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	frame_shift_del	c.2095	p.K701fs	1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700				138	0	0	119	20	14.3885
RAB11FIP2	0	genome.wustl.edu	37	10	119799791	119799792	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	119799791	119799792	-	T	INS	RAB11FIP2	ENST00000369199	human	ensembl	74_37	-1	known	frame_shift_ins	c.639_638	p.P214fs	1.000:1.000	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP2	HGNC	ENSG00000107560				333	0	0	262	17	6.09319
RAB11FIP2	0	genome.wustl.edu	37	10	119805326	119805326	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	119805326	119805326	T	-	DEL	RAB11FIP2	ENST00000369199	human	ensembl	74_37	-1	known	frame_shift_del	c.349	p.T117fs	1.000	superfamily_C2_dom,smart_C2_dom	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP2	HGNC	ENSG00000107560				101	0	0	74	11	12.9412
TIAL1	0	genome.wustl.edu	37	10	121335157	121335157	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	121335157	121335157	T	-	DEL	TIAL1	ENST00000463089	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.987	-	-	-	no_errors	TIAL1	HGNC	ENSG00000151923				360	0	0	215	100	31.746
OAT	0	genome.wustl.edu	37	10	126100644	126100644	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	126100644	126100644	T	-	DEL	OAT	ENST00000368845	human	ensembl	74_37	-1	known	frame_shift_del	c.97	p.T33fs	0.675	NULL	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase,tigrfam_Orn_aminotrans	-	no_errors	OAT	HGNC	ENSG00000065154				133	0	0	97	25	20.4918
DPYSL4	0	genome.wustl.edu	37	10	134017254	134017254	+	RNA	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	134017254	134017254	C	-	DEL	DPYSL4	ENST00000471544	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	DPYSL4	HGNC	ENSG00000151640				31	0	0	29	15	34.0909
PTER	0	genome.wustl.edu	37	10	16547037	16547038	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	16547037	16547038	AG	-	DEL	PTER	ENST00000298942	human	ensembl	74_37	+1	known	frame_shift_del	c.717_718	p.E240fs	0.996:1.000	pfam_Aryldialkylphosphatase,pfam_TatD_family	pfam_Aryldialkylphosphatase,pfam_TatD_family	-	no_errors	PTER	HGNC	ENSG00000165983				236	0	0	193	27	12.2727
CUBN	0	genome.wustl.edu	37	10	17113554	17113554	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	17113554	17113554	A	-	DEL	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	frame_shift_del	c.2496	p.P833fs	0.996	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				108	0	0	81	10	10.989
KIAA1217	0	genome.wustl.edu	37	10	24762792	24762792	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	24762792	24762792	C	-	DEL	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	frame_shift_del	c.1482	p.P496fs	0.767	NULL	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549				104	0	0	92	8	8
MYO3A	0	genome.wustl.edu	37	10	26462759	26462760	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	26462759	26462760	-	A	INS	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	frame_shift_ins	c.3566_3567	p.M1192fs	0.034:0.509	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777				130	0	0	90	23	20.354
MASTL	0	genome.wustl.edu	37	10	27459056	27459056	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	27459056	27459056	A	-	DEL	MASTL	ENST00000375940	human	ensembl	74_37	+1	known	frame_shift_del	c.1168	p.K391fs	0.077	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MASTL	HGNC	ENSG00000120539				181	0	0	141	23	14.0244
SVIL	0	genome.wustl.edu	37	10	29812506	29812506	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	29812506	29812506	C	-	DEL	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	frame_shift_del	c.3037	p.D1013fs	0.054	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				159	0	0	120	21	14.8936
FAM208B	0	genome.wustl.edu	37	10	5766449	5766449	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	5766449	5766449	G	-	DEL	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	frame_shift_del	c.304	p.E103fs	0.996	pfam_DUF3699	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021				142	0	0	115	17	12.8788
ANXA7	0	genome.wustl.edu	37	10	75135834	75135836	+	RNA	DEL	AAA	AAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	75135834	75135836	AAA	-	DEL	ANXA7	ENST00000463788	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.004:0.005	-	-	-	no_errors	ANXA7	HGNC	ENSG00000138279				14	0	0	9	6	40
ADK	0	genome.wustl.edu	37	10	76158266	76158266	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	76158266	76158266	A	-	DEL	ADK	ENST00000286621	human	ensembl	74_37	+1	known	frame_shift_del	c.484	p.K163fs	1.000	pfam_PfkB_dom	pfam_PfkB_dom,prints_Adenokinase	-	no_errors	ADK	HGNC	ENSG00000156110				113	0	0	90	25	21.7391
LARP4B	0	genome.wustl.edu	37	10	890939	890939	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	890939	890939	T	-	DEL	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	frame_shift_del	c.487	p.T163fs	1.000	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				170	0	0	124	24	16.2162
PTEN	0	genome.wustl.edu	37	10	89717769	89717770	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	89717769	89717770	-	A	INS	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	frame_shift_ins	c.794_795	p.D268fs	1.000:0.994	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862				152	0	0	106	29	21.4815
PTEN	0	genome.wustl.edu	37	10	89717770	89717770	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	89717770	89717770	A	-	DEL	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	frame_shift_del	c.795	p.K267fs	0.994	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862				152	0	0	118	17	12.5926
IDE	0	genome.wustl.edu	37	10	94243045	94243045	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	94243045	94243045	A	-	DEL	IDE	ENST00000265986	human	ensembl	74_37	-1	known	frame_shift_del	c.1706	p.L569fs	1.000	superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	IDE	HGNC	ENSG00000119912				70	0	0	64	11	14.6667
CYP26A1	0	genome.wustl.edu	37	10	94837049	94837050	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	94837049	94837050	-	G	INS	CYP26A1	ENST00000224356	human	ensembl	74_37	+1	known	frame_shift_ins	c.1482_1483	p.E495fs	0.989:0.992	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP26A1	HGNC	ENSG00000095596				103	0	0	81	20	19.802
ZNF518A	0	genome.wustl.edu	37	10	97918856	97918856	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	97918856	97918856	A	-	DEL	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.867	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853				118	0	0	89	57	39.0411
PIK3AP1	0	genome.wustl.edu	37	10	98362066	98362066	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	98362066	98362066	G	-	DEL	PIK3AP1	ENST00000339364	human	ensembl	74_37	-1	known	frame_shift_del	c.2331	p.R778fs	0.998	NULL	superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PIK3AP1	HGNC	ENSG00000155629				100	0	0	84	8	8.69565
RRP12	0	genome.wustl.edu	37	10	99120328	99120330	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	10	99120328	99120330	CTC	-	DEL	RRP12	ENST00000370992	human	ensembl	74_37	-1	known	in_frame_del	c.3615_3613	p.E1205in_frame_del	1.000:1.000:0.991	NULL	pfam_Uncharacterised_NUC173,superfamily_ARM-type_fold	-	no_errors	RRP12	HGNC	ENSG00000052749				145	0	0	123	20	13.986
DCUN1D5	0	genome.wustl.edu	37	11	102962501	102962501	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	102962501	102962501	G	-	DEL	DCUN1D5	ENST00000529281	human	ensembl	74_37	-1	known	frame_shift_del	c.101	p.P34fs	0.139	NULL	NULL	-	no_errors	DCUN1D5	HGNC	ENSG00000137692				90	0	0	73	14	16.092
MSANTD4	0	genome.wustl.edu	37	11	105880739	105880739	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	105880739	105880739	A	-	DEL	MSANTD4	ENST00000301919	human	ensembl	74_37	-1	known	frame_shift_del	c.561	p.F187fs	0.903	NULL	NULL	-	no_errors	MSANTD4	HGNC	ENSG00000170903				232	0	0	177	44	19.9095
CWF19L2	0	genome.wustl.edu	37	11	107299981	107299981	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	107299981	107299981	T	-	DEL	CWF19L2	ENST00000282251	human	ensembl	74_37	-1	known	frame_shift_del	c.977	p.N326fs	0.000	NULL	pfam_Cwf19-like_C_dom-1,pfam_Cwf19-like_C_dom-2,superfamily_HIT-like	-	no_errors	CWF19L2	HGNC	ENSG00000152404				119	0	0	107	17	13.7097
DDX6	0	genome.wustl.edu	37	11	118629613	118629614	+	Splice_Site	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	118629613	118629614	-	G	INS	DDX6	ENST00000264018	human	ensembl	74_37	-1	known	splice_site_ins	c.865-3_865-2	e8-2	1.000:0.856	-	-	-	no_errors	DDX6	HGNC	ENSG00000110367				268	0	0	240	29	10.7807
DPAGT1	0	genome.wustl.edu	37	11	118969143	118969143	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	118969143	118969143	A	-	DEL	DPAGT1	ENST00000354202	human	ensembl	74_37	-1	known	frame_shift_del	c.698	p.F233fs	1.000	pfam_Glycosyl_transferase_4	pfam_Glycosyl_transferase_4	-	no_errors	DPAGT1	HGNC	ENSG00000172269				200	1	0.497512	161	28	14.8148
MFRP	0	genome.wustl.edu	37	11	119213688	119213688	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	119213688	119213688	G	-	DEL	MFRP	ENST00000449574	human	ensembl	74_37	-1	known	frame_shift_del	c.1150	p.H384fs	0.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Frizzled_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Frizzled_dom,pfscan_CUB_dom,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	MFRP	HGNC	ENSG00000235718				26	0	0	21	2	8.69565
MFRP	0	genome.wustl.edu	37	11	119216273	119216273	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	119216273	119216273	G	-	DEL	MFRP	ENST00000449574	human	ensembl	74_37	-1	known	frame_shift_del	c.498	p.N167fs	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Frizzled_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Frizzled_dom,pfscan_CUB_dom,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	MFRP	HGNC	ENSG00000235718				72	0	0	95	11	10.3774
SORL1	0	genome.wustl.edu	37	11	121475905	121475905	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	121475905	121475905	A	-	DEL	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	frame_shift_del	c.4735	p.M1581fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642				253	0	0	197	36	15.4506
ARHGAP32	0	genome.wustl.edu	37	11	128851757	128851757	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	128851757	128851757	T	-	DEL	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	frame_shift_del	c.1559	p.N520fs	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909				141	0	0	107	24	18.3206
NFRKB	0	genome.wustl.edu	37	11	129752496	129752496	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	129752496	129752496	T	-	DEL	NFRKB	ENST00000524794	human	ensembl	74_37	-1	known	frame_shift_del	c.1007	p.K336fs	1.000	NULL	NULL	-	no_errors	NFRKB	HGNC	ENSG00000170322				149	1	0.666667	143	26	15.3846
KCNC1	0	genome.wustl.edu	37	11	17794004	17794004	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	17794004	17794004	A	-	DEL	KCNC1	ENST00000265969	human	ensembl	74_37	+1	known	frame_shift_del	c.1363	p.K457fs	1.000	prints_K_chnl_volt-dep_Kv3	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC1	HGNC	ENSG00000129159				98	0	0	105	17	13.9344
SPTY2D1	0	genome.wustl.edu	37	11	18636367	18636367	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	18636367	18636367	G	-	DEL	SPTY2D1	ENST00000336349	human	ensembl	74_37	-1	known	frame_shift_del	c.1454	p.P485fs	0.000	NULL	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	-	no_errors	SPTY2D1	HGNC	ENSG00000179119				72	0	0	67	10	12.987
DCDC1	0	genome.wustl.edu	37	11	30928236	30928236	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	30928236	30928236	T	-	DEL	DCDC1	ENST00000339794	human	ensembl	74_37	-1	known	frame_shift_del	c.1192	p.T398fs	0.001	NULL	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959				82	0	0	72	13	15.2941
CCDC73	0	genome.wustl.edu	37	11	32637520	32637520	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	32637520	32637520	T	-	DEL	CCDC73	ENST00000335185	human	ensembl	74_37	-1	known	frame_shift_del	c.1341	p.E448fs	0.000	NULL	NULL	-	no_errors	CCDC73	HGNC	ENSG00000186714				64	0	0	53	10	15.873
ANO9	0	genome.wustl.edu	37	11	429820	429821	+	Splice_Site	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	429820	429821	-	G	INS	ANO9	ENST00000332826	human	ensembl	74_37	-1	known	splice_site_ins	c.772-3_772-2	e10-2	1.000:0.957	-	-	-	no_errors	ANO9	HGNC	ENSG00000185101				9	0	0	16	3	15.7895
HNRNPKP3	0	genome.wustl.edu	37	11	43283606	43283608	+	RNA	DEL	AAA	AAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	43283606	43283608	AAA	-	DEL	HNRNPKP3	ENST00000511537	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986:0.995:0.998	-	-	-	no_errors	HNRNPKP3	HGNC	ENSG00000251557				17	0	0	11	8	42.1053
TRIM51HP	0	genome.wustl.edu	37	11	55065032	55065032	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	55065032	55065032	T	-	DEL	TRIM51HP	ENST00000526016	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.010	-	-	-	no_errors	TRIM51HP	HGNC	ENSG00000166007				119	0	0	65	14	17.7215
OR4C16	0	genome.wustl.edu	37	11	55339686	55339686	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	55339686	55339686	T	-	DEL	OR4C16	ENST00000314634	human	ensembl	74_37	+1	known	frame_shift_del	c.83	p.L30fs	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C16	HGNC	ENSG00000181935				318	0	0	260	36	12.1622
FEN1	0	genome.wustl.edu	37	11	61563431	61563431	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	61563431	61563431	A	-	DEL	FEN1	ENST00000305885	human	ensembl	74_37	+1	known	frame_shift_del	c.598	p.K201fs	1.000	pfam_XPG-I_dom,smart_XPG-I_dom	pfam_XPG_DNA_repair_N,pfam_XPG-I_dom,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	FEN1	HGNC	ENSG00000168496				88	0	0	89	16	15.2381
METTL12	0	genome.wustl.edu	37	11	62434112	62434112	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	62434112	62434112	G	-	DEL	METTL12	ENST00000532971	human	ensembl	74_37	+1	known	frame_shift_del	c.312	p.V106fs	0.174	pfam_Methyltransf_11	pfam_Methyltransf_11	-	no_errors	METTL12	HGNC	ENSG00000214756				138	0	0	138	17	10.9677
SLC3A2	0	genome.wustl.edu	37	11	62649529	62649529	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	62649529	62649529	A	-	DEL	SLC3A2	ENST00000377892	human	ensembl	74_37	+1	known	frame_shift_del	c.985	p.K331fs	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	-	no_errors	SLC3A2	HGNC	ENSG00000168003				162	0	0	124	18	12.6761
RTN3	0	genome.wustl.edu	37	11	63525656	63525656	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	63525656	63525656	A	-	DEL	RTN3	ENST00000377819	human	ensembl	74_37	+1	known	frame_shift_del	c.3082	p.K1030fs	1.000	pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318				106	0	0	72	20	21.7391
RASGRP2	0	genome.wustl.edu	37	11	64508408	64508408	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	64508408	64508408	C	-	DEL	RASGRP2	ENST00000377486	human	ensembl	74_37	-1	putative	frame_shift_del	c.383	p.G128fs	0.867	NULL	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRP2	HGNC	ENSG00000068831				62	0	0	65	20	23.5294
TIGD3	0	genome.wustl.edu	37	11	65123714	65123714	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	65123714	65123714	C	-	DEL	TIGD3	ENST00000309880	human	ensembl	74_37	+1	known	frame_shift_del	c.435	p.P147fs	0.000	NULL	pfam_HTH_CenpB_DNA-bd_dom,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD3	HGNC	ENSG00000173825				153	0	0	153	40	20.7254
KCNK7	0	genome.wustl.edu	37	11	65360486	65360486	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	65360486	65360486	G	-	DEL	KCNK7	ENST00000340313	human	ensembl	74_37	-1	known	frame_shift_del	c.914	p.P305fs	0.000	pirsf_2pore_dom_K_chnl_TASK	pirsf_2pore_dom_K_chnl_TASK,pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TWIK	-	no_errors	KCNK7	HGNC	ENSG00000173338				57	0	0	30	8	21.0526
ENSG00000245156	0	genome.wustl.edu	37	11	66039143	66039143	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	66039143	66039143	A	-	DEL	ENSG00000245156	ENST00000501708	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	RP11-867G23.3	Clone_based_vega_gene	ENSG00000245156				10	0	0	6	3	33.3333
PITPNM1	0	genome.wustl.edu	37	11	67267649	67267649	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	67267649	67267649	G	-	DEL	PITPNM1	ENST00000356404	human	ensembl	74_37	-1	known	frame_shift_del	c.884	p.P295fs	0.012	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697				88	0	0	47	16	25.3968
LRP5	0	genome.wustl.edu	37	11	68133093	68133093	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	68133093	68133093	C	-	DEL	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	frame_shift_del	c.938	p.P314fs	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,smart_EG-like_dom	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337				136	0	0	121	12	9.02256
INPPL1	0	genome.wustl.edu	37	11	71948209	71948209	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	71948209	71948209	C	-	DEL	INPPL1	ENST00000298229	human	ensembl	74_37	+1	known	frame_shift_del	c.2921	p.P976fs	0.066	NULL	pfam_Endo/exonuclease/phosphatase,pfam_SH2,pfam_SAM_2,pfam_SAM_type1,superfamily_Endo/exonuclease/phosphatase,superfamily_SAM/pointed,smart_SH2,smart_IPPc,smart_SAM,pfscan_SAM,pfscan_SH2,prints_SH2	-	no_errors	INPPL1	HGNC	ENSG00000165458				157	0	0	154	11	6.66667
ENSG00000254988	0	genome.wustl.edu	37	11	76669998	76669998	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	76669998	76669998	T	-	DEL	ENSG00000254988	ENST00000530190	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CTD-2547H18.1	Clone_based_vega_gene	ENSG00000254988				128	0	0	95	16	14.4144
RIC3	0	genome.wustl.edu	37	11	8160039	8160040	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	8160039	8160040	AA	-	DEL	RIC3	ENST00000524799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RIC3	HGNC	ENSG00000166405				25	0	0	21	7	25
STK33	0	genome.wustl.edu	37	11	8457623	8457623	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	8457623	8457623	T	-	DEL	STK33	ENST00000315204	human	ensembl	74_37	-1	known	frame_shift_del	c.1011	p.G338fs	0.936	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK33	HGNC	ENSG00000130413				153	0	0	107	12	10.084
C11orf54	0	genome.wustl.edu	37	11	93486914	93486914	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	11	93486914	93486914	A	-	DEL	C11orf54	ENST00000331239	human	ensembl	74_37	+1	known	frame_shift_del	c.221	p.V77fs	0.016	pfam_DUF1907	pfam_DUF1907	-	no_errors	C11orf54	HGNC	ENSG00000182919				102	1	0.970874	48	16	25
FAM71C	0	genome.wustl.edu	37	12	100042354	100042354	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	100042354	100042354	A	-	DEL	FAM71C	ENST00000324341	human	ensembl	74_37	+1	known	frame_shift_del	c.402	p.K136fs	0.032	pfam_DUF3699	pfam_DUF3699	-	no_errors	FAM71C	HGNC	ENSG00000180219				148	0	0	129	15	10.4167
UTP20	0	genome.wustl.edu	37	12	101680157	101680157	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	101680157	101680157	T	-	DEL	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	frame_shift_del	c.385	p.L131fs	1.000	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800				554	1	0.18018	508	56	9.92908
PARPBP	0	genome.wustl.edu	37	12	102590055	102590055	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	102590055	102590055	T	-	DEL	PARPBP	ENST00000358383	human	ensembl	74_37	+1	known	frame_shift_del	c.1726	p.F577fs	0.996	NULL	superfamily_P-loop_NTPase	-	no_errors	PARPBP	HGNC	ENSG00000185480				139	0	0	97	22	18.4874
HCFC2	0	genome.wustl.edu	37	12	104476625	104476625	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	104476625	104476625	A	-	DEL	HCFC2	ENST00000229330	human	ensembl	74_37	+1	known	frame_shift_del	c.1009	p.A339fs	1.000	NULL	pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	HCFC2	HGNC	ENSG00000111727				190	0	0	136	19	12.2581
NAA25	0	genome.wustl.edu	37	12	112513482	112513482	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	112513482	112513482	T	-	DEL	NAA25	ENST00000261745	human	ensembl	74_37	-1	known	frame_shift_del	c.776	p.N259fs	1.000	NULL	pfam_N-acetylTrfase_B_cplx_non-cat,pfscan_TPR-contain_dom	-	no_errors	NAA25	HGNC	ENSG00000111300				98	0	0	73	15	17.0455
TAOK3	0	genome.wustl.edu	37	12	118693433	118693433	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	118693433	118693433	T	-	DEL	TAOK3	ENST00000542692	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TAOK3	HGNC	ENSG00000135090				221	2	0.896861	189	32	14.4796
GCN1L1	0	genome.wustl.edu	37	12	120575372	120575373	+	Frame_Shift_Del	DEL	CC	CC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	120575372	120575373	CC	-	DEL	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	frame_shift_del	c.6640_6639	p.W2213fs	1.000:1.000	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154				153	0	0	139	8	5.44218
ZCCHC8	0	genome.wustl.edu	37	12	122975046	122975046	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	122975046	122975046	T	-	DEL	ZCCHC8	ENST00000336229	human	ensembl	74_37	-1	known	frame_shift_del	c.386	p.N129fs	0.997	NULL	pfam_PSP,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_PSP,pfscan_Znf_CCHC	-	no_errors	ZCCHC8	HGNC	ENSG00000033030				77	0	0	47	7	12.963
NOC4L	0	genome.wustl.edu	37	12	132632321	132632321	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	132632321	132632321	C	-	DEL	NOC4L	ENST00000330579	human	ensembl	74_37	+1	known	frame_shift_del	c.597	p.E201fs	0.001	superfamily_ARM-type_fold	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	NOC4L	HGNC	ENSG00000184967				93	0	0	100	6	5.66038
GUCY2C	0	genome.wustl.edu	37	12	14796510	14796510	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	14796510	14796510	T	-	DEL	GUCY2C	ENST00000261170	human	ensembl	74_37	-1	known	frame_shift_del	c.1928	p.K643fs	0.998	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_A/G_cyclase,superfamily_Peripla_BP_I,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019				270	0	0	219	24	9.87654
ART4	0	genome.wustl.edu	37	12	14993971	14993971	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	14993971	14993971	T	-	DEL	ART4	ENST00000228936	human	ensembl	74_37	-1	known	frame_shift_del	c.261	p.I87fs	0.004	pfam_ART	pfam_ART,prints_ART	-	no_errors	ART4	HGNC	ENSG00000111339				331	0	0	252	65	20.5047
PLEKHA5	0	genome.wustl.edu	37	12	19514518	19514518	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	19514518	19514518	A	-	DEL	PLEKHA5	ENST00000317589	human	ensembl	74_37	+1	known	frame_shift_del	c.3177	p.T1062fs	0.273	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126				45	0	0	34	6	15
PDE3A	0	genome.wustl.edu	37	12	20522723	20522723	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	20522723	20522723	G	-	DEL	PDE3A	ENST00000359062	human	ensembl	74_37	+1	known	frame_shift_del	c.505	p.E171fs	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3A	HGNC	ENSG00000172572				41	0	0	33	4	10.8108
PDE3A	0	genome.wustl.edu	37	12	20833254	20833255	+	RNA	DEL	CT	CT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	20833254	20833255	CT	-	DEL	PDE3A	ENST00000544307	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.971:0.134	-	-	-	no_errors	PDE3A	HGNC	ENSG00000172572				35	0	0	35	9	20.4545
TM7SF3	0	genome.wustl.edu	37	12	27152717	27152718	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	27152717	27152718	AA	-	DEL	TM7SF3	ENST00000539399	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TM7SF3	HGNC	ENSG00000064115				21	0	0	20	10	33.3333
ALG10B	0	genome.wustl.edu	37	12	38714491	38714491	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	38714491	38714491	T	-	DEL	ALG10B	ENST00000308742	human	ensembl	74_37	+1	known	frame_shift_del	c.898	p.S302fs	0.086	pfam_Alg10,pirsf_Alg10	pfam_Alg10,pirsf_Alg10	-	no_errors	ALG10B	HGNC	ENSG00000175548				433	0	0	330	65	16.4557
DDN	0	genome.wustl.edu	37	12	49391215	49391215	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	49391215	49391215	C	-	DEL	DDN	ENST00000421952	human	ensembl	74_37	-1	known	frame_shift_del	c.1444	p.V482fs	0.172	NULL	NULL	-	no_errors	DDN	HGNC	ENSG00000181418				61	0	0	73	9	10.9756
NCKAP5L	0	genome.wustl.edu	37	12	50191010	50191010	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	50191010	50191010	G	-	DEL	NCKAP5L	ENST00000335999	human	ensembl	74_37	-1	known	frame_shift_del	c.633	p.W212fs	1.000	NULL	NULL	-	no_errors	NCKAP5L	HGNC	ENSG00000167566				27	0	0	34	8	19.0476
MAP3K12	0	genome.wustl.edu	37	12	53877706	53877708	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	53877706	53877708	CCT	-	DEL	MAP3K12	ENST00000267079	human	ensembl	74_37	-1	known	in_frame_del	c.1248_1246	p.R416in_frame_del	1.000:1.000:0.990	pirsf_MAP3K12_MAP3K13,superfamily_Kinase-like_dom	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K12	HGNC	ENSG00000139625				409	0	0	338	66	16.3366
OR9K2	0	genome.wustl.edu	37	12	55524524	55524524	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	55524524	55524524	A	-	DEL	OR9K2	ENST00000305377	human	ensembl	74_37	+1	known	frame_shift_del	c.972	p.K326fs	0.001	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9K2	HGNC	ENSG00000170605				190	0	0	139	37	21.0227
PA2G4	0	genome.wustl.edu	37	12	56505301	56505302	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	56505301	56505302	-	A	INS	PA2G4	ENST00000303305	human	ensembl	74_37	+1	known	frame_shift_ins	c.1107_1108	p.K372fs	1.000:1.000	tigrfam_Pap_1	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,tigrfam_Pap_1	-	no_errors	PA2G4	HGNC	ENSG00000170515				284	1	0.350877	223	48	17.7122
SMARCC2	0	genome.wustl.edu	37	12	56559113	56559113	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	56559113	56559113	G	-	DEL	SMARCC2	ENST00000267064	human	ensembl	74_37	-1	known	frame_shift_del	c.3128	p.P1043fs	1.000	NULL	pfam_SWIRM,pfam_SANT/Myb,superfamily_Homeodomain-like,superfamily_BRCT_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_SANT/Myb,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	SMARCC2	HGNC	ENSG00000139613				78	0	0	74	8	9.7561
SMARCC2	0	genome.wustl.edu	37	12	56566437	56566438	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	56566437	56566438	TC	-	DEL	SMARCC2	ENST00000267064	human	ensembl	74_37	-1	known	frame_shift_del	c.1702_1701	p.K568fs	1.000:1.000	superfamily_Chromodomain-like	pfam_SWIRM,pfam_SANT/Myb,superfamily_Homeodomain-like,superfamily_BRCT_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_SANT/Myb,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	SMARCC2	HGNC	ENSG00000139613				271	0	0	186	41	18.0617
ATP5B	0	genome.wustl.edu	37	12	57036770	57036770	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	57036770	57036770	A	-	DEL	ATP5B	ENST00000550162	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.657	-	-	-	no_errors	ATP5B	HGNC	ENSG00000110955				8	0	0	9	4	30.7692
LRP1	0	genome.wustl.edu	37	12	57572241	57572242	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	57572241	57572242	-	G	INS	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	frame_shift_ins	c.4461_4462	p.E1489fs	0.705:1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				141	0	0	140	22	13.5802
GLI1	0	genome.wustl.edu	37	12	57860075	57860075	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	57860075	57860075	G	-	DEL	GLI1	ENST00000228682	human	ensembl	74_37	+1	known	frame_shift_del	c.815	p.G274fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI1	HGNC	ENSG00000111087				243	0	0	234	15	6.0241
MBD6	0	genome.wustl.edu	37	12	57921401	57921401	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	57921401	57921401	C	-	DEL	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_del	c.2194	p.Q734fs	1.000	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987				239	1	0.416667	216	34	13.6
DTX3	0	genome.wustl.edu	37	12	58000970	58000970	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	58000970	58000970	G	-	DEL	DTX3	ENST00000551632	human	ensembl	74_37	+1	known	frame_shift_del	c.333	p.G113fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	DTX3	HGNC	ENSG00000178498				67	0	0	56	9	13.8462
CYP27B1	0	genome.wustl.edu	37	12	58157486	58157486	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	58157486	58157486	G	-	DEL	CYP27B1	ENST00000228606	human	ensembl	74_37	-1	known	frame_shift_del	c.1321	p.H441fs	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP27B1	HGNC	ENSG00000111012				133	0	0	116	15	11.4504
CHD4	0	genome.wustl.edu	37	12	6711546	6711546	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	6711546	6711546	T	-	DEL	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	frame_shift_del	c.218	p.K73fs	1.000	NULL	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642				541	0	0	428	74	14.741
CNOT2	0	genome.wustl.edu	37	12	70747694	70747707	+	Frame_Shift_Del	DEL	AAAAAAAAAAAAAA	AAAAAAAAAAAAAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAAAAAAAAAAAAA	AAAAAAAAAAAAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	70747694	70747707	AAAAAAAAAAAAAA	-	DEL	CNOT2	ENST00000229195	human	ensembl	74_37	+1	known	frame_shift_del	c.1622_1623	p.*541fs	0.996:0.996	NULL	pfam_NOT	-	no_errors	CNOT2	HGNC	ENSG00000111596				70	0	0	41	8	16.3265
EEA1	0	genome.wustl.edu	37	12	93213103	93213103	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	93213103	93213103	T	-	DEL	EEA1	ENST00000322349	human	ensembl	74_37	-1	known	frame_shift_del	c.1709	p.N570fs	1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Znf_C2H2	-	no_errors	EEA1	HGNC	ENSG00000102189				186	0	0	116	22	15.942
TMPO	0	genome.wustl.edu	37	12	98921672	98921672	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	12	98921672	98921672	A	-	DEL	TMPO	ENST00000266732	human	ensembl	74_37	+1	known	frame_shift_del	c.288	p.T99fs	1.000	NULL	pfam_LAP2alpha,pfam_LEM-like_dom,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom,pfscan_LEM-like_dom	-	no_errors	TMPO	HGNC	ENSG00000120802				184	0	0	177	39	18.0556
PCCA	0	genome.wustl.edu	37	13	100925452	100925452	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	100925452	100925452	T	-	DEL	PCCA	ENST00000376285	human	ensembl	74_37	+1	known	frame_shift_del	c.917	p.L308fs	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_RimK-type,pfam_ATP-grasp_carboxylate-amine,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_RimK-type,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_Biotin_lipoyl	-	no_errors	PCCA	HGNC	ENSG00000175198				81	0	0	72	19	20.8791
COL4A1	0	genome.wustl.edu	37	13	110838865	110838866	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	110838865	110838866	-	G	INS	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	frame_shift_ins	c.1764_1763	p.G589fs	0.994:1.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498				97	0	0	100	6	5.66038
GAS6	0	genome.wustl.edu	37	13	114542718	114542718	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	114542718	114542718	C	-	DEL	GAS6	ENST00000357389	human	ensembl	74_37	-1	known	frame_shift_del	c.449	p.G150fs	0.997	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	GAS6	HGNC	ENSG00000183087				129	0	0	116	23	16.5468
TPTE2	0	genome.wustl.edu	37	13	20041394	20041394	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	20041394	20041394	A	-	DEL	TPTE2	ENST00000382977	human	ensembl	74_37	-1	known	frame_shift_del	c.483	p.F161fs	0.027	pfam_Ion_trans_dom	pfam_Tensin_phosphatase_C2-dom,pfam_Ion_trans_dom,pfam_Dual-sp_phosphatase_cat-dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE2	HGNC	ENSG00000132958				142	0	0	104	18	14.7541
MPHOSPH8	0	genome.wustl.edu	37	13	20245322	20245322	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	20245322	20245322	T	-	DEL	MPHOSPH8	ENST00000496525	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MPHOSPH8	HGNC	ENSG00000196199				72	0	0	54	14	20.5882
HMGB1	0	genome.wustl.edu	37	13	31037600	31037600	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	31037600	31037600	T	-	DEL	HMGB1	ENST00000468384	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	HMGB1	HGNC	ENSG00000189403				144	0	0	105	34	24.4604
BRCA2	0	genome.wustl.edu	37	13	32954022	32954023	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	32954022	32954023	-	A	INS	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	frame_shift_ins	c.9089_9090	p.T3033fs	1.000:0.323	superfamily_NA-bd_OB-fold,pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618				77	0	0	70	6	7.89474
N4BP2L2	0	genome.wustl.edu	37	13	33017684	33017685	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	33017684	33017685	-	T	INS	N4BP2L2	ENST00000399396	human	ensembl	74_37	-1	known	frame_shift_ins	c.990_989	p.N330fs	0.030:0.465	NULL	superfamily_P-loop_NTPase	-	no_errors	N4BP2L2	HGNC	ENSG00000244754				60	0	0	47	8	14.5455
PDS5B	0	genome.wustl.edu	37	13	33344888	33344889	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	33344888	33344889	AA	-	DEL	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	frame_shift_del	c.4161_4162	p.N1390fs	0.002:0.002	NULL	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642				14	0	0	13	4	23.5294
VPS36	0	genome.wustl.edu	37	13	52999942	52999942	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	52999942	52999942	A	-	DEL	VPS36	ENST00000492650	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	VPS36	HGNC	ENSG00000136100				28	0	0	19	7	26.9231
SLITRK5	0	genome.wustl.edu	37	13	88330397	88330397	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	88330397	88330397	C	-	DEL	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	frame_shift_del	c.2754	p.P920fs	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				249	0	0	239	26	9.81132
ABCC4	0	genome.wustl.edu	37	13	95735432	95735432	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	13	95735432	95735432	A	-	DEL	ABCC4	ENST00000376887	human	ensembl	74_37	-1	known	frame_shift_del	c.2648	p.L883fs	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257				137	0	0	133	32	19.3939
DYNC1H1	0	genome.wustl.edu	37	14	102445788	102445788	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	102445788	102445788	T	-	DEL	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	frame_shift_del	c.477	p.F161fs	0.979	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102				277	0	0	244	17	6.51341
ACIN1	0	genome.wustl.edu	37	14	23532172	23532172	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	23532172	23532172	C	-	DEL	ACIN1	ENST00000262710	human	ensembl	74_37	-1	known	frame_shift_del	c.3023	p.G1008fs	1.000	NULL	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	ACIN1	HGNC	ENSG00000100813				200	0	0	153	31	16.8478
G2E3	0	genome.wustl.edu	37	14	31074772	31074772	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	31074772	31074772	A	-	DEL	G2E3	ENST00000206595	human	ensembl	74_37	+1	known	frame_shift_del	c.1072	p.T361fs	0.994	superfamily_HECT	pfam_HECT,superfamily_HECT,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_HECT,pfscan_HECT	-	no_errors	G2E3	HGNC	ENSG00000092140				62	0	0	47	7	12.963
EAPP	0	genome.wustl.edu	37	14	34998659	34998660	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	34998659	34998660	-	T	INS	EAPP	ENST00000250454	human	ensembl	74_37	-1	known	frame_shift_ins	c.375_374	p.K126fs	1.000:1.000	NULL	pfam_E2F-assoc_phosphoprotein	-	no_errors	EAPP	HGNC	ENSG00000129518				112	1	0.884956	95	14	12.844
INSM2	0	genome.wustl.edu	37	14	36005057	36005057	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	36005057	36005057	T	-	DEL	INSM2	ENST00000307169	human	ensembl	74_37	+1	known	frame_shift_del	c.1599	p.F535fs	0.624	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	INSM2	HGNC	ENSG00000168348				90	0	0	63	17	21.25
SLC25A21	0	genome.wustl.edu	37	14	37180581	37180581	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	37180581	37180581	A	-	DEL	SLC25A21	ENST00000331299	human	ensembl	74_37	-1	known	frame_shift_del	c.545	p.F182fs	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A21	HGNC	ENSG00000183032				128	0	0	130	7	5.10949
FANCM	0	genome.wustl.edu	37	14	45645955	45645955	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	45645955	45645955	A	-	DEL	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	frame_shift_del	c.3998	p.V1336fs	0.008	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790				140	0	0	102	24	19.0476
GNPNAT1	0	genome.wustl.edu	37	14	53250196	53250196	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	53250196	53250196	A	-	DEL	GNPNAT1	ENST00000216410	human	ensembl	74_37	-1	known	frame_shift_del	c.162	p.F54fs	0.996	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	GNPNAT1	HGNC	ENSG00000100522				111	0	0	118	29	19.7279
ARID4A	0	genome.wustl.edu	37	14	58830972	58830972	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	58830972	58830972	A	-	DEL	ARID4A	ENST00000355431	human	ensembl	74_37	+1	known	frame_shift_del	c.2165	p.N724fs	1.000	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,smart_Chromo_domain/shadow,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4A	HGNC	ENSG00000032219				157	1	0.632911	97	27	21.7742
ARID4A	0	genome.wustl.edu	37	14	58831996	58831999	+	Frame_Shift_Del	DEL	AGAG	AGAG	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AGAG	AGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	58831996	58831999	AGAG	-	DEL	ARID4A	ENST00000355431	human	ensembl	74_37	+1	known	frame_shift_del	c.3189_3192	p.E1066fs	0.988:1.000:0.992:0.010	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,smart_Chromo_domain/shadow,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4A	HGNC	ENSG00000032219				152	0	0	120	13	9.77444
SLC38A6	0	genome.wustl.edu	37	14	61518564	61518564	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	61518564	61518564	T	-	DEL	SLC38A6	ENST00000354886	human	ensembl	74_37	+1	known	frame_shift_del	c.1110	p.L372fs	0.480	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A6	HGNC	ENSG00000139974				157	0	0	122	35	22.293
SYNE2	0	genome.wustl.edu	37	14	64587756	64587757	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	64587756	64587757	-	A	INS	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	frame_shift_ins	c.13135_13136	p.D4381fs	0.992:0.989	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				142	0	0	140	16	10.2564
ZBTB25	0	genome.wustl.edu	37	14	64954534	64954534	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	64954534	64954534	T	-	DEL	ZBTB25	ENST00000394715	human	ensembl	74_37	-1	known	frame_shift_del	c.415	p.T139fs	0.783	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB25	HGNC	ENSG00000089775				247	0	0	237	36	13.1868
PPP1R36	0	genome.wustl.edu	37	14	65035126	65035126	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	65035126	65035126	A	-	DEL	PPP1R36	ENST00000298705	human	ensembl	74_37	+1	known	frame_shift_del	c.494	p.N167fs	1.000	NULL	NULL	-	no_errors	PPP1R36	HGNC	ENSG00000165807				124	1	0.8	98	17	14.7826
ENSG00000259648	0	genome.wustl.edu	37	14	68082934	68082934	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	68082934	68082934	T	-	DEL	ENSG00000259648	ENST00000559968	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RP11-643G16.4	Clone_based_vega_gene	ENSG00000259648				36	0	0	26	8	23.5294
GALNT16	0	genome.wustl.edu	37	14	69800299	69800300	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	69800299	69800300	-	G	INS	GALNT16	ENST00000337827	human	ensembl	74_37	+1	known	frame_shift_ins	c.949_950	p.E320fs	1.000:1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT16	HGNC	ENSG00000100626				184	0	0	145	17	10.4938
ADAM21P1	0	genome.wustl.edu	37	14	70712722	70712722	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	70712722	70712722	T	-	DEL	ADAM21P1	ENST00000530196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.672	-	-	-	no_errors	ADAM21P1	HGNC	ENSG00000235812				493	0	0	413	22	5.05747
ADAM21	0	genome.wustl.edu	37	14	70925869	70925869	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	70925869	70925869	A	-	DEL	ADAM21	ENST00000267499	human	ensembl	74_37	+1	known	frame_shift_del	c.1653	p.K552fs	0.001	pfam_ADAM_Cys-rich,smart_ADAM_Cys-rich	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM21	HGNC	ENSG00000139985				317	0	0	270	21	7.21649
DPF3	0	genome.wustl.edu	37	14	73137761	73137762	+	RNA	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	73137761	73137762	-	A	INS	DPF3	ENST00000557704	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.991:0.001	-	-	-	no_errors	DPF3	HGNC	ENSG00000205683				9	0	0	12	4	25
ELMSAN1	0	genome.wustl.edu	37	14	74196464	74196464	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	74196464	74196464	G	-	DEL	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	frame_shift_del	c.1974	p.I659fs	0.998	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030				82	0	0	66	11	14.2857
ELMSAN1	0	genome.wustl.edu	37	14	74205773	74205773	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	74205773	74205773	G	-	DEL	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	frame_shift_del	c.939	p.N314fs	0.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030				42	0	0	27	6	18.1818
STON2	0	genome.wustl.edu	37	14	81743433	81743433	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	81743433	81743433	T	-	DEL	STON2	ENST00000267540	human	ensembl	74_37	-1	known	frame_shift_del	c.2222	p.N741fs	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C	pfam_Stonin2_N,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C,pfscan_SHD	-	no_errors	STON2	HGNC	ENSG00000140022				291	1	0.342466	234	39	14.2857
TRIP11	0	genome.wustl.edu	37	14	92480822	92480823	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	92480822	92480823	-	T	INS	TRIP11	ENST00000267622	human	ensembl	74_37	-1	known	frame_shift_ins	c.923_922	p.M308fs	0.378:0.377	NULL	superfamily_Ribosomal_L29,pfscan_GRIP	-	no_errors	TRIP11	HGNC	ENSG00000100815				97	0	0	62	12	16.2162
UNC79	0	genome.wustl.edu	37	14	94088050	94088050	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	14	94088050	94088050	A	-	DEL	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	frame_shift_del	c.4537	p.K1515fs	1.000	superfamily_ARM-type_fold	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				179	0	0	130	30	18.75
PCSK6	0	genome.wustl.edu	37	15	101845535	101845537	+	In_Frame_Del	DEL	CAC	CAC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CAC	CAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	101845535	101845537	CAC	-	DEL	PCSK6	ENST00000348070	human	ensembl	74_37	-1	known	in_frame_del	c.2835_2833	p.V945in_frame_del	1.000:1.000:1.000	pfam_PLAC,superfamily_Growth_fac_rcpt_N_dom,pfscan_PLAC	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,pfam_PLAC,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Growth_fac_rcpt_N_dom,superfamily_Prot_inh_propept,smart_Furin_repeat,smart_EG-like_dom,pfscan_PLAC,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK6	HGNC	ENSG00000140479				30	0	0	28	7	20
HERC2	0	genome.wustl.edu	37	15	28499646	28499647	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	28499646	28499647	-	T	INS	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	frame_shift_ins	c.2890_2889	p.E963fs	1.000:1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				88	0	0	71	9	11.25
FMN1	0	genome.wustl.edu	37	15	33192185	33192185	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	33192185	33192185	T	-	DEL	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	frame_shift_del	c.2980	p.S994fs	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905				510	0	0	359	70	16.317
KATNBL1	0	genome.wustl.edu	37	15	34455847	34455848	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	34455847	34455848	-	T	INS	KATNBL1	ENST00000256544	human	ensembl	74_37	-1	known	frame_shift_ins	c.31_30	p.R10fs	1.000:1.000	NULL	NULL	-	no_errors	KATNBL1	HGNC	ENSG00000134152				158	0	0	85	20	19.0476
TMEM62	0	genome.wustl.edu	37	15	43427812	43427812	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	43427812	43427812	A	-	DEL	TMEM62	ENST00000260403	human	ensembl	74_37	+1	known	frame_shift_del	c.395	p.T134fs	1.000	NULL	superfamily_Cadherin-like	-	no_errors	TMEM62	HGNC	ENSG00000137842				77	0	0	60	8	11.7647
EIF3J	0	genome.wustl.edu	37	15	44843099	44843099	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	44843099	44843099	A	-	DEL	EIF3J	ENST00000261868	human	ensembl	74_37	+1	known	frame_shift_del	c.173	p.E61fs	1.000	pfam_eIF3j	pfam_eIF3j	-	no_errors	EIF3J	HGNC	ENSG00000104131				123	0	0	106	14	11.6667
B2M	0	genome.wustl.edu	37	15	45003781	45003782	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	45003781	45003782	CT	-	DEL	B2M	ENST00000544417	human	ensembl	74_37	+1	known	frame_shift_del	c.37_38	p.L15fs	0.000:0.000	NULL	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	B2M	HGNC	ENSG00000166710				104	0	0	66	12	15.3846
B2M	0	genome.wustl.edu	37	15	45007896	45007897	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	45007896	45007897	-	G	INS	B2M	ENST00000544417	human	ensembl	74_37	+1	known	frame_shift_ins	c.343_344	p.K117fs	0.989:1.000	NULL	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	B2M	HGNC	ENSG00000166710				193	0	0	179	35	16.3551
SPATA5L1	0	genome.wustl.edu	37	15	45710841	45710841	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	45710841	45710841	T	-	DEL	SPATA5L1	ENST00000305560	human	ensembl	74_37	+1	known	frame_shift_del	c.2055	p.S688fs	0.999	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	SPATA5L1	HGNC	ENSG00000171763				166	0	0	137	17	11.039
MYEF2	0	genome.wustl.edu	37	15	48449998	48449999	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	48449998	48449999	AA	-	DEL	MYEF2	ENST00000557868	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	MYEF2	HGNC	ENSG00000104177				8	0	0	8	5	38.4615
FAM214A	0	genome.wustl.edu	37	15	52903363	52903364	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	52903363	52903364	AC	-	DEL	FAM214A	ENST00000261844	human	ensembl	74_37	-1	known	frame_shift_del	c.494_493	p.V165fs	1.000:1.000	NULL	NULL	-	no_errors	FAM214A	HGNC	ENSG00000047346				190	0	0	135	18	11.7647
TLN2	0	genome.wustl.edu	37	15	63076122	63076123	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	63076122	63076123	CA	-	DEL	TLN2	ENST00000472902	human	ensembl	74_37	+1	putative	frame_shift_del	c.948_949	p.L320fs	0.004:0.000	NULL	pfam_Vinculin-bd_dom,superfamily_Vinculin/catenin	-	no_errors	TLN2	HGNC	ENSG00000171914				161	0	0	126	15	10.6383
ZNF609	0	genome.wustl.edu	37	15	64967247	64967247	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	64967247	64967247	A	-	DEL	ZNF609	ENST00000326648	human	ensembl	74_37	+1	known	frame_shift_del	c.2194	p.K734fs	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357				281	1	0.35461	173	69	28.5124
CYP1A2	0	genome.wustl.edu	37	15	75042781	75042781	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	75042781	75042781	C	-	DEL	CYP1A2	ENST00000343932	human	ensembl	74_37	+1	known	frame_shift_del	c.702	p.L236fs	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP1,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP1A2	HGNC	ENSG00000140505				294	0	0	231	49	17.5
KIAA1024	0	genome.wustl.edu	37	15	79750586	79750586	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	79750586	79750586	A	-	DEL	KIAA1024	ENST00000305428	human	ensembl	74_37	+1	known	frame_shift_del	c.2097	p.S702fs	0.527	NULL	pfam_UPF0258	-	no_errors	KIAA1024	HGNC	ENSG00000169330				184	1	0.540541	164	22	11.828
KIAA1199	0	genome.wustl.edu	37	15	81234220	81234221	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	81234220	81234221	-	GA	INS	KIAA1199	ENST00000220244	human	ensembl	74_37	+1	known	frame_shift_ins	c.3438_3439	p.K1149fs	0.999:1.000	NULL	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	KIAA1199	HGNC	ENSG00000103888				102	0	0	91	19	17.2727
MESDC2	0	genome.wustl.edu	37	15	81271633	81271633	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	81271633	81271633	T	-	DEL	MESDC2	ENST00000261758	human	ensembl	74_37	-1	known	frame_shift_del	c.632	p.K211fs	1.000	pfam_Mesoderm_development_cand-2	pfam_Mesoderm_development_cand-2	-	no_errors	MESDC2	HGNC	ENSG00000117899				117	0	0	109	23	17.4242
TM6SF1	0	genome.wustl.edu	37	15	83805312	83805312	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	83805312	83805312	T	-	DEL	TM6SF1	ENST00000379386	human	ensembl	74_37	+1	known	frame_shift_del	c.1010	p.L339fs	0.172	pfam_Transmembrane_6/97	pfam_Transmembrane_6/97	-	no_errors	TM6SF1	HGNC	ENSG00000136404				261	0	0	237	19	7.42188
IQGAP1	0	genome.wustl.edu	37	15	91019925	91019925	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	91019925	91019925	A	-	DEL	IQGAP1	ENST00000268182	human	ensembl	74_37	+1	known	frame_shift_del	c.2815	p.N941fs	1.000	NULL	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,pfam_WW_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_WW_dom,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP1	HGNC	ENSG00000140575				226	0	0	194	40	17.094
SLCO3A1	0	genome.wustl.edu	37	15	92706441	92706441	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	92706441	92706441	A	-	DEL	SLCO3A1	ENST00000555549	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.813	-	-	-	no_errors	SLCO3A1	HGNC	ENSG00000176463				72	0	0	49	24	32.8767
SYNM	0	genome.wustl.edu	37	15	99671083	99671083	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	15	99671083	99671083	G	-	DEL	SYNM	ENST00000336292	human	ensembl	74_37	+1	known	frame_shift_del	c.2515	p.H841fs	0.001	NULL	pfam_IF	-	no_errors	SYNM	HGNC	ENSG00000182253				79	0	0	77	20	20.6186
CIITA	0	genome.wustl.edu	37	16	11000726	11000726	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	11000726	11000726	G	-	DEL	CIITA	ENST00000324288	human	ensembl	74_37	+1	known	frame_shift_del	c.1377	p.D461fs	0.000	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,prints_MHC_II_transact	-	no_errors	CIITA	HGNC	ENSG00000179583				155	0	0	123	21	14.5833
MYH11	0	genome.wustl.edu	37	16	15802687	15802687	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	15802687	15802687	G	-	DEL	MYH11	ENST00000452625	human	ensembl	74_37	-1	known	frame_shift_del	c.5819	p.P1940fs	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH11	HGNC	ENSG00000133392				22	0	0	11	2	15.3846
IQCK	0	genome.wustl.edu	37	16	19867941	19867942	+	RNA	DEL	CT	CT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	19867941	19867942	CT	-	DEL	IQCK	ENST00000562762	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.002	-	-	-	no_errors	IQCK	HGNC	ENSG00000174628				34	0	0	23	9	28.125
ATP2A1	0	genome.wustl.edu	37	16	28913640	28913640	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	28913640	28913640	C	-	DEL	ATP2A1	ENST00000357084	human	ensembl	74_37	+1	known	frame_shift_del	c.2457	p.R822fs	0.957	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A1	HGNC	ENSG00000196296				132	1	0.75188	99	15	13.1579
LAT	0	genome.wustl.edu	37	16	28997465	28997465	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	28997465	28997465	C	-	DEL	LAT	ENST00000395461	human	ensembl	74_37	+1	known	frame_shift_del	c.281	p.W96fs	0.000	NULL	prints_Linker_for_activat_Tcells_prot	-	no_errors	LAT	HGNC	ENSG00000213658				170	0	0	157	23	12.7778
SRCAP	0	genome.wustl.edu	37	16	30736371	30736371	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	30736371	30736371	C	-	DEL	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	frame_shift_del	c.5626	p.P1878fs	1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603				140	0	0	154	13	7.78443
PRSS36	0	genome.wustl.edu	37	16	31151942	31151942	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	31151942	31151942	G	-	DEL	PRSS36	ENST00000268281	human	ensembl	74_37	-1	known	frame_shift_del	c.2038	p.L680fs	0.448	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS36	HGNC	ENSG00000178226				26	0	0	32	12	27.2727
ZNF174	0	genome.wustl.edu	37	16	3452111	3452111	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	3452111	3452111	A	-	DEL	ZNF174	ENST00000268655	human	ensembl	74_37	+1	known	frame_shift_del	c.107	p.N38fs	0.000	superfamily_Retrov_capsid_C	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF174	HGNC	ENSG00000103343				307	0	0	257	38	12.8814
C16orf89	0	genome.wustl.edu	37	16	5094401	5094401	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	5094401	5094401	G	-	DEL	C16orf89	ENST00000422873	human	ensembl	74_37	-1	known	frame_shift_del	c.1148	p.P383fs	0.000	NULL	NULL	-	no_errors	C16orf89	HGNC	ENSG00000153446				62	0	0	67	7	9.45946
CHD9	0	genome.wustl.edu	37	16	53348351	53348351	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	53348351	53348351	A	-	DEL	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	frame_shift_del	c.7285	p.R2431fs	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200				20	0	0	18	4	18.1818
NLRC5	0	genome.wustl.edu	37	16	57059906	57059909	+	Frame_Shift_Del	DEL	CTGC	CTGC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTGC	CTGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	57059906	57059909	CTGC	-	DEL	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	frame_shift_del	c.1051_1054	p.C354fs	0.981:1.000:1.000:1.000	superfamily_P-loop_NTPase	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853				74	0	0	86	8	8.51064
NLRC5	0	genome.wustl.edu	37	16	57060239	57060240	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	57060239	57060240	GA	-	DEL	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	frame_shift_del	c.1384_1385	p.E462fs	0.613:0.666	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853				81	0	0	65	19	22.619
TRADD	0	genome.wustl.edu	37	16	67190446	67190448	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	67190446	67190448	CCA	-	DEL	TRADD	ENST00000345057	human	ensembl	74_37	-1	known	in_frame_del	c.118_116	p.V39in_frame_del	0.993:1.000:1.000	superfamily_TRADD_N	pfam_TRADD_N,pfam_Death_domain,superfamily_TRADD_N,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	-	no_errors	TRADD	HGNC	ENSG00000102871				101	0	0	110	25	18.5185
FHOD1	0	genome.wustl.edu	37	16	67267852	67267852	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	67267852	67267852	G	-	DEL	FHOD1	ENST00000258201	human	ensembl	74_37	-1	known	frame_shift_del	c.1754	p.P585fs	1.000	NULL	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD1	HGNC	ENSG00000135723				12	0	0	22	7	24.1379
SLC9A5	0	genome.wustl.edu	37	16	67304676	67304676	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	67304676	67304676	C	-	DEL	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	frame_shift_del	c.2254	p.S754fs	1.000	NULL	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740				55	0	0	35	9	20.4545
PSMD7	0	genome.wustl.edu	37	16	74335455	74335456	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	74335455	74335456	-	G	INS	PSMD7	ENST00000219313	human	ensembl	74_37	+1	known	frame_shift_ins	c.262_263	p.E89fs	1.000:1.000	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	-	no_errors	PSMD7	HGNC	ENSG00000103035				171	0	0	147	41	21.8085
ADAMTS18	0	genome.wustl.edu	37	16	77356311	77356311	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	77356311	77356311	A	-	DEL	ADAMTS18	ENST00000282849	human	ensembl	74_37	-1	known	frame_shift_del	c.2085	p.F695fs	0.998	NULL	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS18	HGNC	ENSG00000140873				224	0	0	196	38	16.2393
ADAD2	0	genome.wustl.edu	37	16	84227613	84227613	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	84227613	84227613	A	-	DEL	ADAD2	ENST00000268624	human	ensembl	74_37	+1	known	frame_shift_del	c.420	p.V142fs	0.000	NULL	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD2	HGNC	ENSG00000140955				123	0	0	86	11	11.3402
ENSG00000261286	0	genome.wustl.edu	37	16	84495782	84495782	+	RNA	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	16	84495782	84495782	G	-	DEL	ENSG00000261286	ENST00000565700	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-517C16.2	Clone_based_vega_gene	ENSG00000261286				60	0	0	48	8	14.2857
EPN2	0	genome.wustl.edu	37	17	19232949	19232950	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	19232949	19232950	-	A	INS	EPN2	ENST00000314728	human	ensembl	74_37	+1	known	frame_shift_ins	c.1400_1401	p.T470fs	1.000:1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN2	HGNC	ENSG00000072134				167	1	0.595238	155	35	18.4211
DPH1	0	genome.wustl.edu	37	17	1936832	1936833	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	1936832	1936833	-	C	INS	DPH1	ENST00000263083	human	ensembl	74_37	+1	known	frame_shift_ins	c.110_111	p.E40fs	1.000:0.975	pirsf_DPH1_eu/DPH2_arc	pfam_DPH1/DPH2,pirsf_DPH1_eu/DPH2_arc,tigrfam_DPH1/DPH2	-	no_errors	DPH1	HGNC	ENSG00000108963				139	0	0	137	20	12.7389
ULK2	0	genome.wustl.edu	37	17	19729489	19729489	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	19729489	19729489	A	-	DEL	ULK2	ENST00000361658	human	ensembl	74_37	-1	known	frame_shift_del	c.798	p.F266fs	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser/Thr_kinase_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK2	HGNC	ENSG00000083290				199	0	0	160	12	6.97674
SPECC1	0	genome.wustl.edu	37	17	20108263	20108263	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	20108263	20108263	A	-	DEL	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	frame_shift_del	c.901	p.N303fs	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487				211	1	0.471698	160	61	27.6018
CLUH	0	genome.wustl.edu	37	17	2594064	2594065	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	2594064	2594065	-	T	INS	CLUH	ENST00000435359	human	ensembl	74_37	-1	known	frame_shift_ins	c.3754_3753	p.D1251fs	1.000:1.000	NULL	superfamily_GSKIP_dom	-	no_errors	CLUH	HGNC	ENSG00000132361				66	0	0	41	10	19.6078
NF1	0	genome.wustl.edu	37	17	29654775	29654780	+	In_Frame_Del	DEL	ACCAAG	ACCAAG	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	ACCAAG	ACCAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	29654775	29654780	ACCAAG	-	DEL	NF1	ENST00000358273	human	ensembl	74_37	+1	known	in_frame_del	c.5527_5532	p.TK1843in_frame_del	1.000:1.000:0.999:1.000:1.000:1.000	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				136	0	0	104	9	7.9646
DDX52	0	genome.wustl.edu	37	17	36002157	36002157	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	36002157	36002157	T	-	DEL	DDX52	ENST00000349699	human	ensembl	74_37	-1	known	frame_shift_del	c.268	p.R90fs	0.997	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX52	HGNC	ENSG00000141141				387	1	0.257732	280	47	14.3731
CDK12	0	genome.wustl.edu	37	17	37687471	37687472	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	37687471	37687472	-	G	INS	CDK12	ENST00000447079	human	ensembl	74_37	+1	known	frame_shift_ins	c.4375_4376	p.P1463fs	1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK12	HGNC	ENSG00000167258				104	0	0	114	14	10.9375
P2RX1	0	genome.wustl.edu	37	17	3819462	3819462	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	3819462	3819462	G	-	DEL	P2RX1	ENST00000225538	human	ensembl	74_37	-1	known	frame_shift_del	c.58	p.R20fs	0.997	pfam_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X1_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX1	HGNC	ENSG00000108405				200	0	0	147	31	17.4157
NR1D1	0	genome.wustl.edu	37	17	38252178	38252178	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	38252178	38252178	G	-	DEL	NR1D1	ENST00000246672	human	ensembl	74_37	-1	known	frame_shift_del	c.767	p.P256fs	0.994	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR1D1	HGNC	ENSG00000126368				20	0	0	20	5	20
TOP2A	0	genome.wustl.edu	37	17	38552642	38552642	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	38552642	38552642	T	-	DEL	TOP2A	ENST00000423485	human	ensembl	74_37	-1	known	frame_shift_del	c.3613	p.T1205fs	0.002	NULL	pfam_Topo_IIA_A/C,pfam_Topo_IIA_bsu_dom2,pfam_DTHCT,pfam_HATPase_ATP-bd,superfamily_Topo_IIA_like_dom,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_Topo_IIA,smart_Topo_IIA_A/C,prints_TopoII_euk,prints_Topo_IIA,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	TOP2A	HGNC	ENSG00000131747				229	0	0	134	33	19.7605
KRT32	0	genome.wustl.edu	37	17	39623520	39623520	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	39623520	39623520	G	-	DEL	KRT32	ENST00000225899	human	ensembl	74_37	-1	known	frame_shift_del	c.58	p.R20fs	0.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT32	HGNC	ENSG00000108759				76	0	0	51	6	10.5263
STAT5B	0	genome.wustl.edu	37	17	40375459	40375459	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	40375459	40375459	T	-	DEL	STAT5B	ENST00000293328	human	ensembl	74_37	-1	known	frame_shift_del	c.491	p.K164fs	1.000	pfam_STAT_TF_alpha,superfamily_STAT_TF_coiled-coil	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5B	HGNC	ENSG00000173757				80	0	0	56	15	21.1268
CCDC43	0	genome.wustl.edu	37	17	42756253	42756253	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	42756253	42756253	T	-	DEL	CCDC43	ENST00000315286	human	ensembl	74_37	-1	known	frame_shift_del	c.646	p.R216fs	1.000	NULL	NULL	-	no_errors	CCDC43	HGNC	ENSG00000180329				65	0	0	64	35	35.3535
HOXB3	0	genome.wustl.edu	37	17	46628219	46628219	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	46628219	46628219	C	-	DEL	HOXB3	ENST00000311626	human	ensembl	74_37	-1	known	frame_shift_del	c.773	p.G258fs	1.000	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB3	HGNC	ENSG00000120093				92	0	0	104	6	5.45455
XYLT2	0	genome.wustl.edu	37	17	48433967	48433967	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	48433967	48433967	C	-	DEL	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	frame_shift_del	c.1578	p.G529fs	1.000	pfam_XylT	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532				87	0	0	91	11	10.7843
BZRAP1	0	genome.wustl.edu	37	17	56381747	56381749	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	56381747	56381749	CTC	-	DEL	BZRAP1	ENST00000343736	human	ensembl	74_37	-1	known	in_frame_del	c.5558_5556	p.R1854in_frame_del	1.000:1.000:1.000	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379				204	0	0	175	11	5.91398
RNF43	0	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	56435161	56435161	C	-	DEL	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	frame_shift_del	c.1976	p.G659fs	0.900	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375				173	0	0	107	27	20.1493
PRR11	0	genome.wustl.edu	37	17	57247171	57247171	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	57247171	57247171	A	-	DEL	PRR11	ENST00000262293	human	ensembl	74_37	+1	known	frame_shift_del	c.58	p.E23fs	0.749	NULL	NULL	-	no_errors	PRR11	HGNC	ENSG00000068489				169	0	0	109	6	5.21739
CEP112	0	genome.wustl.edu	37	17	64059082	64059082	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	64059082	64059082	T	-	DEL	CEP112	ENST00000392769	human	ensembl	74_37	-1	known	frame_shift_del	c.1073	p.K358fs	1.000	NULL	superfamily_t-SNARE	-	no_errors	CEP112	HGNC	ENSG00000154240				138	0	0	113	7	5.83333
MIR497HG	0	genome.wustl.edu	37	17	6920177	6920177	+	RNA	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	6920177	6920177	G	-	DEL	MIR497HG	ENST00000572453	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	MIR497HG	HGNC	ENSG00000267532				121	0	0	121	22	15.3846
GPS2	0	genome.wustl.edu	37	17	7216419	7216419	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	7216419	7216419	G	-	DEL	GPS2	ENST00000380728	human	ensembl	74_37	-1	known	frame_shift_del	c.829	p.Q277fs	1.000	NULL	NULL	-	no_errors	GPS2	HGNC	ENSG00000132522				186	0	0	184	36	16.3636
SAP30BP	0	genome.wustl.edu	37	17	73702109	73702109	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	73702109	73702109	A	-	DEL	SAP30BP	ENST00000584667	human	ensembl	74_37	+1	known	frame_shift_del	c.682	p.G230fs	1.000	NULL	pfam_SAP30BP	-	no_errors	SAP30BP	HGNC	ENSG00000161526				45	0	0	34	6	15
CHD3	0	genome.wustl.edu	37	17	7798765	7798765	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	7798765	7798765	C	-	DEL	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	frame_shift_del	c.1612	p.R540fs	0.007	superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				214	0	0	179	28	13.5266
MYH10	0	genome.wustl.edu	37	17	8396271	8396273	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	17	8396271	8396273	CTT	-	DEL	MYH10	ENST00000396239	human	ensembl	74_37	-1	known	in_frame_del	c.4251_4249	p.K1417in_frame_del	1.000:1.000:1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026				228	0	0	170	28	14.1414
ESCO1	0	genome.wustl.edu	37	18	19120600	19120600	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	19120600	19120600	A	-	DEL	ESCO1	ENST00000383276	human	ensembl	74_37	-1	known	frame_shift_del	c.2015	p.L672fs	1.000	NULL	NULL	-	no_errors	ESCO1	HGNC	ENSG00000141446				46	0	0	25	5	16.6667
OSBPL1A	0	genome.wustl.edu	37	18	21750331	21750331	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	21750331	21750331	T	-	DEL	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	frame_shift_del	c.2378	p.N793fs	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447				302	0	0	245	54	18.0602
THOC1	0	genome.wustl.edu	37	18	224097	224097	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	224097	224097	T	-	DEL	THOC1	ENST00000261600	human	ensembl	74_37	-1	known	frame_shift_del	c.1291	p.I431fs	1.000	pfam_THO_THOC1	pfam_THO_THOC1,pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	-	no_errors	THOC1	HGNC	ENSG00000079134				50	0	0	32	8	20
ENSG00000252258	0	genome.wustl.edu	37	18	3025533	3025533	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	3025533	3025533	A	-	DEL	ENSG00000252258	ENST00000516449	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORA70	RFAM	ENSG00000252258				31	0	0	25	4	13.7931
ASXL3	0	genome.wustl.edu	37	18	31323658	31323658	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	31323658	31323658	A	-	DEL	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	frame_shift_del	c.3846	p.T1284fs	0.998	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431				161	0	0	135	24	15.0943
ZBTB7C	0	genome.wustl.edu	37	18	45567076	45567076	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	45567076	45567076	C	-	DEL	ZBTB7C	ENST00000332053	human	ensembl	74_37	-1	known	frame_shift_del	c.403	p.E135fs	0.994	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7C	HGNC	ENSG00000184828				59	0	0	47	10	17.5439
TCF4	0	genome.wustl.edu	37	18	53252552	53252552	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	53252552	53252552	T	-	DEL	TCF4	ENST00000398339	human	ensembl	74_37	-1	known	frame_shift_del	c.410	p.N137fs	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TCF4	HGNC	ENSG00000196628				262	0	0	184	31	14.4186
WDR7	0	genome.wustl.edu	37	18	54358513	54358513	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	54358513	54358513	G	-	DEL	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	frame_shift_del	c.784	p.D264fs	1.000	superfamily_Quinonprotein_ADH-like_supfam	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157				239	0	0	203	38	15.7676
LMAN1	0	genome.wustl.edu	37	18	57013285	57013285	+	Splice_Site	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	57013285	57013285	T	-	DEL	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	splice_site_del	c.823-2	e8-2	1.000	-	-	-	no_errors	LMAN1	HGNC	ENSG00000074695				227	0	0	188	27	12.5581
PHLPP1	0	genome.wustl.edu	37	18	60506242	60506242	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	60506242	60506242	T	-	DEL	PHLPP1	ENST00000588953	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PHLPP1	HGNC	ENSG00000081913				50	0	0	48	10	17.2414
CCDC102B	0	genome.wustl.edu	37	18	66504311	66504311	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	66504311	66504311	A	-	DEL	CCDC102B	ENST00000319445	human	ensembl	74_37	+1	known	frame_shift_del	c.311	p.K105fs	1.000	NULL	NULL	-	no_errors	CCDC102B	HGNC	ENSG00000150636				139	0	0	150	16	9.63855
LAMA1	0	genome.wustl.edu	37	18	7038885	7038885	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	18	7038885	7038885	T	-	DEL	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	frame_shift_del	c.1487	p.N496fs	1.000	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				249	0	0	227	31	12.0155
ZGLP1	0	genome.wustl.edu	37	19	10419286	10419286	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	10419286	10419286	G	-	DEL	ZGLP1	ENST00000403903	human	ensembl	74_37	-1	known	frame_shift_del	c.72	p.W25fs	0.001	NULL	pfam_Znf_GATA,smart_Znf_GATA,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	ZGLP1	HGNC	ENSG00000220201				25	0	0	25	5	16.6667
ELAVL3	0	genome.wustl.edu	37	19	11577605	11577605	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	11577605	11577605	C	-	DEL	ELAVL3	ENST00000359227	human	ensembl	74_37	-1	known	frame_shift_del	c.47	p.G16fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL3	HGNC	ENSG00000196361				27	0	0	33	5	13.1579
ZNF878	0	genome.wustl.edu	37	19	12155486	12155486	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	12155486	12155486	T	-	DEL	ZNF878	ENST00000602107	human	ensembl	74_37	-1	known	frame_shift_del	c.871	p.R291fs	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF878	HGNC	ENSG00000257446				205	0	0	160	45	21.9512
ZNF44	0	genome.wustl.edu	37	19	12384448	12384448	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	12384448	12384448	A	-	DEL	ZNF44	ENST00000393337	human	ensembl	74_37	-1	known	frame_shift_del	c.766	p.W256fs	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF44	HGNC	ENSG00000197857				249	0	0	215	56	20.6642
OR10H2	0	genome.wustl.edu	37	19	15839381	15839381	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	15839381	15839381	T	-	DEL	OR10H2	ENST00000305899	human	ensembl	74_37	+1	known	frame_shift_del	c.528	p.L178fs	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H2	HGNC	ENSG00000171942				127	0	0	140	31	18.1287
SIN3B	0	genome.wustl.edu	37	19	16962291	16962291	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	16962291	16962291	C	-	DEL	SIN3B	ENST00000379803	human	ensembl	74_37	+1	known	frame_shift_del	c.795	p.H265fs	0.998	NULL	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3B	HGNC	ENSG00000127511				115	0	0	96	23	19.3277
NDUFA13	0	genome.wustl.edu	37	19	19638818	19638818	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	19638818	19638818	G	-	DEL	NDUFA13	ENST00000252576	human	ensembl	74_37	+1	known	frame_shift_del	c.567	p.E191fs	0.959	pfam_GRIM-19	pfam_GRIM-19	-	no_errors	NDUFA13	HGNC	ENSG00000186010				50	0	0	31	3	8.82353
ZNF506	0	genome.wustl.edu	37	19	19905597	19905598	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	19905597	19905598	TC	-	DEL	ZNF506	ENST00000443905	human	ensembl	74_37	-1	known	frame_shift_del	c.1099_1098	p.K367fs	1.000:1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF506	HGNC	ENSG00000081665				216	0	0	163	36	18.0905
ZNF486	0	genome.wustl.edu	37	19	20308052	20308052	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	20308052	20308052	A	-	DEL	ZNF486	ENST00000335117	human	ensembl	74_37	+1	known	frame_shift_del	c.533	p.K180fs	0.996	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF486	HGNC	ENSG00000256229				117	0	0	103	18	14.876
ZNF66	0	genome.wustl.edu	37	19	20988745	20988745	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	20988745	20988745	A	-	DEL	ZNF66	ENST00000344519	human	ensembl	74_37	+1	known	frame_shift_del	c.339	p.G116fs	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF66	HGNC	ENSG00000160229				60	0	0	60	7	10.4478
ZNF43	0	genome.wustl.edu	37	19	21992087	21992087	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	21992087	21992087	T	-	DEL	ZNF43	ENST00000354959	human	ensembl	74_37	-1	known	frame_shift_del	c.752	p.N251fs	0.932	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF43	HGNC	ENSG00000198521				176	0	0	137	26	15.9509
ZNF507	0	genome.wustl.edu	37	19	32845518	32845521	+	Frame_Shift_Del	DEL	GAGA	GAGA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GAGA	GAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	32845518	32845521	GAGA	-	DEL	ZNF507	ENST00000311921	human	ensembl	74_37	+1	known	frame_shift_del	c.1782_1785	p.R595fs	1.000:1.000:1.000:1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF507	HGNC	ENSG00000168813				78	0	0	57	15	20.8333
ZNF540	0	genome.wustl.edu	37	19	38103018	38103018	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	38103018	38103018	T	-	DEL	ZNF540	ENST00000316433	human	ensembl	74_37	+1	known	frame_shift_del	c.837	p.F281fs	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF540	HGNC	ENSG00000171817				122	0	0	91	13	12.5
SAMD4B	0	genome.wustl.edu	37	19	39868176	39868178	+	In_Frame_Del	DEL	ATC	ATC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	ATC	ATC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	39868176	39868178	ATC	-	DEL	SAMD4B	ENST00000314471	human	ensembl	74_37	+1	known	in_frame_del	c.1156_1158	p.I388in_frame_del	1.000:1.000:1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	-	no_errors	SAMD4B	HGNC	ENSG00000179134				104	0	0	88	14	13.7255
CIC	0	genome.wustl.edu	37	19	42795609	42795609	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	42795609	42795609	C	-	DEL	CIC	ENST00000575354	human	ensembl	74_37	+1	known	frame_shift_del	c.2689	p.A900fs	0.999	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				117	0	0	92	26	22.0339
APOC1	0	genome.wustl.edu	37	19	45419666	45419666	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	45419666	45419666	A	-	DEL	APOC1	ENST00000592885	human	ensembl	74_37	+1	novel	frame_shift_del	c.278	p.T96fs	0.005	NULL	pfam_ApoC-I	-	no_errors	APOC1	HGNC	ENSG00000130208				30	0	0	31	8	20.5128
PNMAL2	0	genome.wustl.edu	37	19	46997818	46997818	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	46997818	46997818	G	-	DEL	PNMAL2	ENST00000599531	human	ensembl	74_37	-1	known	frame_shift_del	c.905	p.P302fs	0.000	NULL	NULL	-	no_errors	PNMAL2	HGNC	ENSG00000204851				114	0	0	115	16	12.2137
ZC3H4	0	genome.wustl.edu	37	19	47570094	47570095	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	47570094	47570095	-	T	INS	ZC3H4	ENST00000253048	human	ensembl	74_37	-1	known	frame_shift_ins	c.3431_3430	p.S1144fs	1.000:1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H4	HGNC	ENSG00000130749				13	0	0	13	3	18.75
DHX34	0	genome.wustl.edu	37	19	47884148	47884149	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	47884148	47884149	-	C	INS	DHX34	ENST00000328771	human	ensembl	74_37	+1	known	frame_shift_ins	c.3058_3059	p.H1022fs	0.075:0.265	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX34	HGNC	ENSG00000134815				79	0	0	63	11	14.8649
SLC8A2	0	genome.wustl.edu	37	19	47935681	47935683	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	47935681	47935683	TCC	-	DEL	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	in_frame_del	c.2132_2130	p.E710in_frame_del	1.000:1.000:1.000	tigrfam_Na_Ca_Ex	pfam_Calx_beta,pfam_NaCa_Exmemb,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A2	HGNC	ENSG00000118160				122	0	0	133	20	13.0719
IL4I1	0	genome.wustl.edu	37	19	50392998	50393001	+	Frame_Shift_Del	DEL	CTTC	CTTC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTTC	CTTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	50392998	50393001	CTTC	-	DEL	IL4I1	ENST00000341114	human	ensembl	74_37	-1	known	frame_shift_del	c.1699_1696	p.E566fs	0.000:0.000:0.000:0.001	NULL	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_CHP00275_HI0933-like,pfam_FAD_bind_dom,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_AlaDH/PNT_NAD(H)-bd,pfam_mOase_FAD-bd,prints_Flavin_amine_oxidase	-	no_errors	IL4I1	HGNC	ENSG00000104951				104	0	0	83	9	9.78261
NAPSB	0	genome.wustl.edu	37	19	50837601	50837602	+	RNA	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	50837601	50837602	-	C	INS	NAPSB	ENST00000527780	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.861:0.853	-	-	-	no_errors	NAPSB	HGNC	ENSG00000131401				25	0	0	23	6	20.6897
LILRB1	0	genome.wustl.edu	37	19	55148333	55148334	+	RNA	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	55148333	55148334	-	G	INS	LILRB1	ENST00000462628	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.218:0.187	-	-	-	no_errors	LILRB1	HGNC	ENSG00000104972				85	0	0	57	7	10.9375
KIR2DL4	0	genome.wustl.edu	37	19	55324675	55324675	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	55324675	55324675	A	-	DEL	KIR2DL4	ENST00000396284	human	ensembl	74_37	+1	known	frame_shift_del	c.796	p.V269fs	0.003	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL4	HGNC	ENSG00000189013				52	0	0	43	23	34.8485
SAFB2	0	genome.wustl.edu	37	19	5621342	5621344	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	5621342	5621344	CTT	-	DEL	SAFB2	ENST00000252542	human	ensembl	74_37	-1	known	in_frame_del	c.252_250	p.K84in_frame_del	0.271:0.333:0.990	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254				629	0	0	584	98	14.3695
NLRP9	0	genome.wustl.edu	37	19	56249721	56249722	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	56249721	56249722	-	A	INS	NLRP9	ENST00000332836	human	ensembl	74_37	-1	known	frame_shift_ins	c.20_19	p.S7fs	0.014:0.009	superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792				232	0	0	209	14	6.27803
ZNF776	0	genome.wustl.edu	37	19	58264856	58264857	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	58264856	58264857	-	A	INS	ZNF776	ENST00000317178	human	ensembl	74_37	+1	known	frame_shift_ins	c.358_359	p.L123fs	0.057:0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF776	HGNC	ENSG00000152443				141	0	0	96	27	21.9512
GPR108	0	genome.wustl.edu	37	19	6736719	6736719	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	6736719	6736719	C	-	DEL	GPR108	ENST00000264080	human	ensembl	74_37	-1	known	frame_shift_del	c.124	p.E42fs	1.000	NULL	pfam_TM_rcpt_euk	-	no_errors	GPR108	HGNC	ENSG00000125734				84	0	0	66	19	22.3529
HNRNPM	0	genome.wustl.edu	37	19	8520329	8520329	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	19	8520329	8520329	A	-	DEL	HNRNPM	ENST00000325495	human	ensembl	74_37	+1	known	frame_shift_del	c.154	p.N53fs	1.000	pfam_HnRNP_M_PY-NLS	pfam_RRM_dom,pfam_HnRNP_M_PY-NLS,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPM	HGNC	ENSG00000099783				141	0	0	94	22	18.9655
MAP4K4	0	genome.wustl.edu	37	2	102452432	102452433	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	102452432	102452433	AA	-	DEL	MAP4K4	ENST00000324219	human	ensembl	74_37	+1	known	frame_shift_del	c.765_766	p.K257fs	0.996:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MAP4K4	HGNC	ENSG00000071054				42	0	0	36	8	18.1818
SLC9A4	0	genome.wustl.edu	37	2	103149137	103149137	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	103149137	103149137	A	-	DEL	SLC9A4	ENST00000295269	human	ensembl	74_37	+1	known	frame_shift_del	c.2387	p.K798fs	0.597	NULL	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251				84	0	0	51	9	15
ENSG00000214184	0	genome.wustl.edu	37	2	109123989	109123989	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	109123989	109123989	T	-	DEL	ENSG00000214184	ENST00000322353	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.892	-	-	-	no_errors	AC012487.2	Clone_based_vega_gene	ENSG00000214184				60	0	0	45	18	28.5714
ANAPC1	0	genome.wustl.edu	37	2	112614257	112614258	+	Splice_Site	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	112614257	112614258	-	T	INS	ANAPC1	ENST00000341068	human	ensembl	74_37	-1	known	splice_site_ins	c.1450-2_1450-1	e12-1	0.994:0.992	-	-	-	no_errors	ANAPC1	HGNC	ENSG00000153107				107	0	0	119	7	5.55556
RGPD8	0	genome.wustl.edu	37	2	113181886	113181887	+	Splice_Site	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	113181886	113181887	-	A	INS	RGPD8	ENST00000302558	human	ensembl	74_37	-1	known	splice_site_ins	c.73-3_73-2	e2-2	1.000:0.969	-	-	-	no_errors	RGPD8	HGNC	ENSG00000169629				172	0	0	104	7	6.30631
DDX18	0	genome.wustl.edu	37	2	118583908	118583909	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	118583908	118583909	-	T	INS	DDX18	ENST00000263239	human	ensembl	74_37	+1	known	frame_shift_ins	c.1585_1586	p.L530fs	1.000:1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX18	HGNC	ENSG00000088205				63	0	0	35	11	23.913
TUBA3E	0	genome.wustl.edu	37	2	130949677	130949677	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	130949677	130949677	G	-	DEL	TUBA3E	ENST00000312988	human	ensembl	74_37	-1	known	frame_shift_del	c.1080	p.T361fs	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin	-	no_errors	TUBA3E	HGNC	ENSG00000152086				137	0	0	152	9	5.59006
LOC100129961	0	genome.wustl.edu	37	2	135625119	135625120	+	RNA	DEL	CT	CT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	135625119	135625120	CT	-	DEL	LOC100129961	ENST00000392929	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.755:0.455	-	-	-	no_errors	AC016725.4	Clone_based_vega_gene	ENSG00000224043				105	0	0	105	29	21.6418
ZRANB3	0	genome.wustl.edu	37	2	135988440	135988440	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	135988440	135988440	T	-	DEL	ZRANB3	ENST00000264159	human	ensembl	74_37	-1	known	frame_shift_del	c.1597	p.R533fs	0.015	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_HNH,pfam_Znf_RanBP2,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Znf_RanBP2,smart_HNH_nuc,pfscan_Znf_RanBP2,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ZRANB3	HGNC	ENSG00000121988				190	0	0	140	31	18.1287
LRP1B	0	genome.wustl.edu	37	2	141081589	141081590	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	141081589	141081590	AT	-	DEL	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	frame_shift_del	c.12387_12386	p.Y4129fs	1.000:1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				215	0	0	158	34	17.7083
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				274	0	0	159	88	35.6275
DAPL1	0	genome.wustl.edu	37	2	159660819	159660820	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	159660819	159660820	-	A	INS	DAPL1	ENST00000309950	human	ensembl	74_37	+1	known	frame_shift_ins	c.84_85	p.Q30fs	1.000:1.000	NULL	NULL	-	no_errors	DAPL1	HGNC	ENSG00000163331				46	0	0	24	3	11.1111
DAPL1	0	genome.wustl.edu	37	2	159660856	159660856	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	159660856	159660856	A	-	DEL	DAPL1	ENST00000309950	human	ensembl	74_37	+1	known	frame_shift_del	c.121	p.T43fs	0.967	NULL	NULL	-	no_errors	DAPL1	HGNC	ENSG00000163331				42	0	0	26	7	21.2121
MARCH7	0	genome.wustl.edu	37	2	160604680	160604680	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	160604680	160604680	T	-	DEL	MARCH7	ENST00000259050	human	ensembl	74_37	+1	known	frame_shift_del	c.879	p.S296fs	0.910	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH7	HGNC	ENSG00000136536				162	1	0.613497	128	21	14.094
LY75	0	genome.wustl.edu	37	2	160673462	160673462	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	160673462	160673462	T	-	DEL	LY75	ENST00000554112	human	ensembl	74_37	-1	known	frame_shift_del	c.4235	p.K1412fs	0.727	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	LY75	HGNC	ENSG00000054219				152	1	0.653595	119	16	11.8519
LY75	0	genome.wustl.edu	37	2	160676356	160676356	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	160676356	160676356	T	-	DEL	LY75	ENST00000554112	human	ensembl	74_37	-1	known	frame_shift_del	c.4034	p.N1345fs	0.139	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	LY75	HGNC	ENSG00000054219				218	0	0	164	28	14.5833
COBLL1	0	genome.wustl.edu	37	2	165551296	165551296	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	165551296	165551296	A	-	DEL	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	frame_shift_del	c.2921	p.L974fs	0.972	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438				70	0	0	62	20	24.3902
SCN9A	0	genome.wustl.edu	37	2	167144965	167144965	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	167144965	167144965	T	-	DEL	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	frame_shift_del	c.1299	p.E434fs	1.000	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432				135	0	0	131	21	13.8158
XIRP2	0	genome.wustl.edu	37	2	168115079	168115080	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	168115079	168115080	-	A	INS	XIRP2	ENST00000420519	human	ensembl	74_37	+1	known	frame_shift_ins	c.2122_2123	p.T710fs	0.998:0.561	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	XIRP2	HGNC	ENSG00000163092				70	0	0	54	12	18.1818
FKBP7	0	genome.wustl.edu	37	2	179330469	179330471	+	RNA	DEL	AAA	AAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179330469	179330471	AAA	-	DEL	FKBP7	ENST00000464248	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	FKBP7	HGNC	ENSG00000079150				80	0	0	62	11	15.0685
ENSG00000271011	0	genome.wustl.edu	37	2	179442293	179442293	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179442293	179442293	A	-	DEL	ENSG00000271011	ENST00000604215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.038	-	-	-	no_errors	RP11-171I2.5	Clone_based_vega_gene	ENSG00000271011				94	0	0	55	14	20.2899
CCDC141	0	genome.wustl.edu	37	2	179710387	179710387	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179710387	179710387	T	-	DEL	CCDC141	ENST00000420890	human	ensembl	74_37	-1	known	frame_shift_del	c.3440	p.N1147fs	0.017	NULL	pfam_Ig_I-set,pfam_Spectrin_repeat,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CCDC141	HGNC	ENSG00000163492				100	0	0	70	20	22.2222
SESTD1	0	genome.wustl.edu	37	2	179986627	179986628	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	179986627	179986628	-	T	INS	SESTD1	ENST00000428443	human	ensembl	74_37	-1	known	frame_shift_ins	c.1312_1311	p.G437fs	1.000:1.000	NULL	superfamily_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	SESTD1	HGNC	ENSG00000187231				154	0	0	125	33	20.8861
FSIP2	0	genome.wustl.edu	37	2	186673611	186673611	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	186673611	186673611	A	-	DEL	FSIP2	ENST00000343098	human	ensembl	74_37	+1	known	frame_shift_del	c.19845	p.K6617fs	0.003	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738				173	0	0	125	20	13.7931
OSGEPL1	0	genome.wustl.edu	37	2	190620089	190620089	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	190620089	190620089	T	-	DEL	OSGEPL1	ENST00000264151	human	ensembl	74_37	-1	known	frame_shift_del	c.419	p.K140fs	0.997	pfam_Gcp-like_dom,prints_KAE1/YgjD,tigrfam_KAE1/YgjD	pfam_Gcp-like_dom,prints_KAE1/YgjD,tigrfam_KAE1/YgjD	-	no_errors	OSGEPL1	HGNC	ENSG00000128694				83	0	0	72	21	22.5806
DNAH7	0	genome.wustl.edu	37	2	196866535	196866535	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	196866535	196866535	T	-	DEL	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	frame_shift_del	c.1037	p.K346fs	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997				128	0	0	116	21	15.3285
GTF3C3	0	genome.wustl.edu	37	2	197649614	197649614	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	197649614	197649614	T	-	DEL	GTF3C3	ENST00000263956	human	ensembl	74_37	-1	known	frame_shift_del	c.1081	p.T361fs	0.044	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GTF3C3	HGNC	ENSG00000119041				146	0	0	103	24	18.8976
SGOL2	0	genome.wustl.edu	37	2	201438019	201438019	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	201438019	201438019	A	-	DEL	SGOL2	ENST00000357799	human	ensembl	74_37	+1	known	frame_shift_del	c.2950	p.K985fs	0.133	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535				161	0	0	105	22	17.3228
AOX1	0	genome.wustl.edu	37	2	201477410	201477410	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	201477410	201477410	T	-	DEL	AOX1	ENST00000374700	human	ensembl	74_37	+1	known	frame_shift_del	c.1342	p.F449fs	0.897	pfam_CO_DH_flav_C,superfamily_CO_DH_flav_C,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Aldehyde_oxidase	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Aldehyde_oxidase	-	no_errors	AOX1	HGNC	ENSG00000138356				164	0	0	138	21	13.2075
BZW1	0	genome.wustl.edu	37	2	201683505	201683505	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	201683505	201683505	A	-	DEL	BZW1	ENST00000409600	human	ensembl	74_37	+1	known	frame_shift_del	c.847	p.N285fs	1.000	superfamily_ARM-type_fold	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	-	no_errors	BZW1	HGNC	ENSG00000082153				89	0	0	74	7	8.64198
ALS2CR11	0	genome.wustl.edu	37	2	202352367	202352367	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	202352367	202352367	T	-	DEL	ALS2CR11	ENST00000286195	human	ensembl	74_37	-1	known	frame_shift_del	c.1840	p.M614fs	0.097	NULL	superfamily_C2_dom	-	no_errors	ALS2CR11	HGNC	ENSG00000155754				281	0	0	227	52	18.638
GCSHP3	0	genome.wustl.edu	37	2	206980715	206980715	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	206980715	206980715	T	-	DEL	GCSHP3	ENST00000453039	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.033	-	-	-	no_errors	AC007383.4	Clone_based_vega_gene	ENSG00000231955				26	0	0	22	7	24.1379
ZDBF2	0	genome.wustl.edu	37	2	207174869	207174869	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	207174869	207174869	A	-	DEL	ZDBF2	ENST00000374423	human	ensembl	74_37	+1	known	frame_shift_del	c.5617	p.K1875fs	0.000	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186				70	0	0	56	8	12.5
PECR	0	genome.wustl.edu	37	2	216930130	216930132	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	216930130	216930132	CCT	-	DEL	PECR	ENST00000265322	human	ensembl	74_37	-1	known	in_frame_del	c.329_327	p.G110in_frame_del	1.000:1.000:0.980	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DHB_DH	-	no_errors	PECR	HGNC	ENSG00000115425				196	0	0	143	31	17.8161
XRCC5	0	genome.wustl.edu	37	2	216992312	216992312	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	216992312	216992312	A	-	DEL	XRCC5	ENST00000392132	human	ensembl	74_37	+1	known	frame_shift_del	c.852	p.E287fs	0.161	pfam_Ku70/Ku80_beta-barrel_dom,superfamily_SPOC_like_C_dom	pfam_Ku_N,pfam_Ku_PK_bind,pfam_Ku70/Ku80_beta-barrel_dom,pfam_Ku_C,superfamily_SPOC_like_C_dom,superfamily_Ku_PK_bind,smart_VWF_A,smart_Ku70/Ku80_beta-barrel_dom	-	no_errors	XRCC5	HGNC	ENSG00000079246				172	0	0	134	28	17.284
ZNF142	0	genome.wustl.edu	37	2	219508084	219508084	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	219508084	219508084	C	-	DEL	ZNF142	ENST00000411696	human	ensembl	74_37	-1	known	frame_shift_del	c.3155	p.G1052fs	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568				73	0	0	87	6	6.45161
IRS1	0	genome.wustl.edu	37	2	227661664	227661664	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	227661664	227661664	C	-	DEL	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	frame_shift_del	c.1791	p.H598fs	0.995	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047				54	0	0	55	7	11.2903
UGT1A3	0	genome.wustl.edu	37	2	234638283	234638283	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	234638283	234638283	T	-	DEL	UGT1A3	ENST00000482026	human	ensembl	74_37	+1	known	frame_shift_del	c.511	p.L173fs	0.996	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A3	HGNC	ENSG00000243135				432	1	0.230947	385	71	15.5702
AGAP1	0	genome.wustl.edu	37	2	236649677	236649677	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	236649677	236649677	C	-	DEL	AGAP1	ENST00000304032	human	ensembl	74_37	+1	known	frame_shift_del	c.381	p.P129fs	0.952	pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP1	HGNC	ENSG00000157985				84	0	0	66	8	10.8108
COL6A3	0	genome.wustl.edu	37	2	238244864	238244866	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	238244864	238244866	GCA	-	DEL	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	in_frame_del	c.8879_8877	p.A2960in_frame_del	0.002:0.000:0.000	NULL	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				137	0	0	108	13	10.7438
ATAD2B	0	genome.wustl.edu	37	2	24098756	24098756	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	24098756	24098756	T	-	DEL	ATAD2B	ENST00000238789	human	ensembl	74_37	-1	known	frame_shift_del	c.920	p.K307fs	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778				23	0	0	33	8	19.5122
MAPRE3	0	genome.wustl.edu	37	2	27248517	27248517	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	27248517	27248517	C	-	DEL	MAPRE3	ENST00000233121	human	ensembl	74_37	+1	known	frame_shift_del	c.536	p.C182fs	1.000	NULL	pfam_EB1_C,pfam_CH-domain,superfamily_CH-domain,superfamily_EB1_C,pfscan_CH-domain	-	no_errors	MAPRE3	HGNC	ENSG00000084764				71	0	0	87	19	17.9245
CAD	0	genome.wustl.edu	37	2	27456981	27456982	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	27456981	27456982	-	C	INS	CAD	ENST00000264705	human	ensembl	74_37	+1	known	frame_shift_ins	c.3505_3506	p.Q1172fs	1.000:1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,pfscan_ATP-grasp,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				93	0	0	89	9	9.18367
ZNF513	0	genome.wustl.edu	37	2	27601696	27601696	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	27601696	27601696	G	-	DEL	ZNF513	ENST00000323703	human	ensembl	74_37	-1	known	frame_shift_del	c.437	p.P146fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF513	HGNC	ENSG00000163795				18	0	0	26	4	13.3333
LCLAT1	0	genome.wustl.edu	37	2	30790958	30790959	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	30790958	30790959	-	A	INS	LCLAT1	ENST00000309052	human	ensembl	74_37	+1	known	frame_shift_ins	c.658_659	p.N222fs	1.000:1.000	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	LCLAT1	HGNC	ENSG00000172954				120	0	0	91	8	8.08081
RPS7	0	genome.wustl.edu	37	2	3625326	3625326	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	3625326	3625326	A	-	DEL	RPS7	ENST00000304921	human	ensembl	74_37	+1	known	frame_shift_del	c.318	p.S108fs	1.000	pfam_Ribosomal_S7e	pfam_Ribosomal_S7e	-	no_errors	RPS7	HGNC	ENSG00000171863				98	0	0	89	15	14.4231
LRPPRC	0	genome.wustl.edu	37	2	44145165	44145165	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	44145165	44145165	T	-	DEL	LRPPRC	ENST00000260665	human	ensembl	74_37	-1	known	frame_shift_del	c.3147	p.A1051fs	0.844	NULL	pfam_Pentatricopeptide_repeat,tigrfam_Pentatricopeptide_repeat	-	no_errors	LRPPRC	HGNC	ENSG00000138095				77	0	0	57	17	22.973
MTIF2	0	genome.wustl.edu	37	2	55490777	55490777	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	55490777	55490777	T	-	DEL	MTIF2	ENST00000263629	human	ensembl	74_37	-1	known	frame_shift_del	c.218	p.K73fs	1.000	NULL	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,pfam_GTP_binding_domain,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,superfamily_TIF_IF2_dom3,superfamily_Transl_B-barrel,tigrfam_Small_GTP-bd_dom	-	no_errors	MTIF2	HGNC	ENSG00000085760				101	0	0	99	12	10.8108
UGP2	0	genome.wustl.edu	37	2	64111165	64111166	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	64111165	64111166	-	A	INS	UGP2	ENST00000337130	human	ensembl	74_37	+1	known	frame_shift_ins	c.513_514	p.I173fs	0.502:0.998	pfam_UDPGP_trans,pirsf_UDPGP_trans_subgr	pfam_UDPGP_trans,pirsf_UDPGP_trans_subgr	-	no_errors	UGP2	HGNC	ENSG00000169764				132	0	0	119	16	11.8519
PELI1	0	genome.wustl.edu	37	2	64322001	64322001	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	64322001	64322001	A	-	DEL	PELI1	ENST00000358912	human	ensembl	74_37	-1	known	frame_shift_del	c.1092	p.F364fs	1.000	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI1	HGNC	ENSG00000197329				160	0	0	138	29	17.3653
ARHGAP25	0	genome.wustl.edu	37	2	69046341	69046341	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	69046341	69046341	C	-	DEL	ARHGAP25	ENST00000409202	human	ensembl	74_37	+1	known	frame_shift_del	c.1090	p.P365fs	0.985	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP25	HGNC	ENSG00000163219				327	0	0	255	61	19.3038
SNRNP27	0	genome.wustl.edu	37	2	70131463	70131463	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	70131463	70131463	T	-	DEL	SNRNP27	ENST00000409116	human	ensembl	74_37	+1	novel	frame_shift_del	c.426	p.S145fs	0.141	NULL	pfam_DUF1777	-	no_errors	SNRNP27	HGNC	ENSG00000124380				124	1	0.8	83	37	30.8333
MPHOSPH10	0	genome.wustl.edu	37	2	71361201	71361203	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	71361201	71361203	GAA	-	DEL	MPHOSPH10	ENST00000244230	human	ensembl	74_37	+1	known	in_frame_del	c.892_894	p.E300in_frame_del	0.788:0.745:0.189	pfam_Mpp10,pirsf_snoRNP_Mpp10	pfam_Mpp10,pirsf_snoRNP_Mpp10	-	no_errors	MPHOSPH10	HGNC	ENSG00000124383				125	0	0	129	14	9.79021
TPRKB	0	genome.wustl.edu	37	2	73957881	73957881	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	73957881	73957881	A	-	DEL	TPRKB	ENST00000485758	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.004	-	-	-	no_errors	TPRKB	HGNC	ENSG00000144034				88	0	0	54	17	23.9437
TMEM150A	0	genome.wustl.edu	37	2	85827121	85827123	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	85827121	85827123	GCA	-	DEL	TMEM150A	ENST00000334462	human	ensembl	74_37	-1	known	in_frame_del	c.289_287	p.L96in_frame_del	1.000:0.983:1.000	pfam_Frag1/DRAM/Sfk1	pfam_Frag1/DRAM/Sfk1	-	no_errors	TMEM150A	HGNC	ENSG00000168890				80	0	0	73	12	14.1176
EIF2AK3	0	genome.wustl.edu	37	2	88882965	88882966	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	88882965	88882966	-	T	INS	EIF2AK3	ENST00000303236	human	ensembl	74_37	-1	known	frame_shift_ins	c.1746_1745	p.N582fs	0.995:0.863	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK3	HGNC	ENSG00000172071				379	0	0	254	51	16.7213
TAF1B	0	genome.wustl.edu	37	2	9989571	9989572	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	9989571	9989572	AA	-	DEL	TAF1B	ENST00000263663	human	ensembl	74_37	+1	known	frame_shift_del	c.187_188	p.N66fs	0.991:0.950	NULL	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750				33	0	0	28	5	15.1515
EIF5B	0	genome.wustl.edu	37	2	99977649	99977650	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	2	99977649	99977650	-	A	INS	EIF5B	ENST00000289371	human	ensembl	74_37	+1	known	frame_shift_ins	c.285_286	p.K98fs	0.928:0.998	NULL	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_TIF_IF2_dom3,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417				103	0	0	81	8	8.98876
CST4	0	genome.wustl.edu	37	20	23667825	23667826	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	23667825	23667826	-	C	INS	CST4	ENST00000217423	human	ensembl	74_37	-1	known	frame_shift_ins	c.242_241	p.V81fs	0.002:0.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST4	HGNC	ENSG00000101441				224	0	0	210	25	10.6383
GINS1	0	genome.wustl.edu	37	20	25422397	25422397	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	25422397	25422397	A	-	DEL	GINS1	ENST00000262460	human	ensembl	74_37	+1	known	frame_shift_del	c.507	p.N172fs	0.232	NULL	NULL	-	no_errors	GINS1	HGNC	ENSG00000101003				183	0	0	112	17	13.1783
HM13	0	genome.wustl.edu	37	20	30142485	30142487	+	RNA	DEL	AAA	AAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	30142485	30142487	AAA	-	DEL	HM13	ENST00000474466	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.172:0.159:0.155	-	-	-	no_errors	HM13	HGNC	ENSG00000101294				21	0	0	23	7	23.3333
BPIFB4	0	genome.wustl.edu	37	20	31671213	31671214	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	31671213	31671214	-	C	INS	BPIFB4	ENST00000375483	human	ensembl	74_37	+1	known	frame_shift_ins	c.210_211	p.V73fs	0.020:0.030	NULL	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB4	HGNC	ENSG00000186191				167	0	0	130	18	12.1622
GDF5	0	genome.wustl.edu	37	20	34025412	34025412	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	34025412	34025412	G	-	DEL	GDF5	ENST00000374369	human	ensembl	74_37	-1	known	frame_shift_del	c.297	p.R100fs	0.990	NULL	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF5	HGNC	ENSG00000125965				81	0	0	71	11	13.4146
TTI1	0	genome.wustl.edu	37	20	36640782	36640784	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	36640782	36640784	GAA	-	DEL	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	in_frame_del	c.1437_1435	p.F479in_frame_del	1.000:1.000:1.000	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407				146	0	0	114	15	11.6279
IFT52	0	genome.wustl.edu	37	20	42232493	42232493	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	42232493	42232493	T	-	DEL	IFT52	ENST00000373030	human	ensembl	74_37	+1	known	frame_shift_del	c.301	p.L102fs	1.000	pfam_ABC_transp_unknown	pfam_ABC_transp_unknown	-	no_errors	IFT52	HGNC	ENSG00000101052				162	0	0	132	16	10.8108
SLPI	0	genome.wustl.edu	37	20	43881730	43881731	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	43881730	43881731	-	G	INS	SLPI	ENST00000338380	human	ensembl	74_37	-1	known	frame_shift_ins	c.307_306	p.N102fs	0.001:0.000	pfam_WAP-type_4-diS_core,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core	pfam_WAP-type_4-diS_core,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,prints_WAP-type_4-diS_core	-	no_errors	SLPI	HGNC	ENSG00000124107				140	0	0	118	19	13.8686
CSE1L	0	genome.wustl.edu	37	20	47691907	47691908	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	47691907	47691908	-	T	INS	CSE1L	ENST00000262982	human	ensembl	74_37	+1	known	frame_shift_ins	c.1185_1186	p.E397fs	1.000:1.000	pfam_Cse1,superfamily_ARM-type_fold	pfam_CAS_CSE1_C,pfam_Cse1,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	CSE1L	HGNC	ENSG00000124207				256	0	0	240	26	9.77444
ZNFX1	0	genome.wustl.edu	37	20	47872450	47872451	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	47872450	47872451	-	T	INS	ZNFX1	ENST00000371752	human	ensembl	74_37	-1	known	frame_shift_ins	c.2699_2698	p.R900fs	0.895:0.896	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_Znf_NFX1	-	no_errors	ZNFX1	HGNC	ENSG00000124201				100	1	0.990099	69	14	16.8675
LAMA5	0	genome.wustl.edu	37	20	60885264	60885264	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	60885264	60885264	G	-	DEL	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	frame_shift_del	c.10704	p.Y3569fs	0.161	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				71	0	0	65	9	12.1622
PRPF6	0	genome.wustl.edu	37	20	62664288	62664290	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	62664288	62664290	AGA	-	DEL	PRPF6	ENST00000266079	human	ensembl	74_37	+1	known	in_frame_del	c.2768_2770	p.K925in_frame_del	1.000:1.000:1.000	NULL	pfam_PRP1_N,smart_HAT,smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PRPF6	HGNC	ENSG00000101161				69	0	0	66	6	8.33333
PLCB4	0	genome.wustl.edu	37	20	9353043	9353043	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	20	9353043	9353043	A	-	DEL	PLCB4	ENST00000334005	human	ensembl	74_37	+1	known	frame_shift_del	c.679	p.I229fs	1.000	pirsf_PLC-beta,pfam_PLipase_C_EF-hand-like	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_PLC-beta_CS,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB4	HGNC	ENSG00000101333				135	0	0	85	20	19.0476
ADAMTS1	0	genome.wustl.edu	37	21	28210011	28210011	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	28210011	28210011	T	-	DEL	ADAMTS1	ENST00000284984	human	ensembl	74_37	-1	known	frame_shift_del	c.2791	p.R931fs	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,prints_Pept_M12B_ADAM-TS1	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS1,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS1	HGNC	ENSG00000154734				234	0	0	143	39	21.4286
IFNGR2	0	genome.wustl.edu	37	21	34799320	34799320	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	34799320	34799320	A	-	DEL	IFNGR2	ENST00000290219	human	ensembl	74_37	+1	known	frame_shift_del	c.542	p.G183fs	0.605	pfam_Interferon_alpha/beta_rcpt_bsu,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Interferon_alpha/beta_rcpt_bsu,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IFNGR2	HGNC	ENSG00000159128				580	0	0	377	40	9.59233
ZBTB21	0	genome.wustl.edu	37	21	43413803	43413803	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	43413803	43413803	T	-	DEL	ZBTB21	ENST00000310826	human	ensembl	74_37	-1	known	frame_shift_del	c.402	p.V135fs	0.002	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB21	HGNC	ENSG00000173276				162	0	0	113	27	19.2857
PDE9A	0	genome.wustl.edu	37	21	44195538	44195539	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	44195538	44195539	AA	-	DEL	PDE9A	ENST00000460989	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PDE9A	HGNC	ENSG00000160191				34	0	0	25	6	19.3548
AGPAT3	0	genome.wustl.edu	37	21	45387993	45387993	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	45387993	45387993	G	-	DEL	AGPAT3	ENST00000291572	human	ensembl	74_37	+1	known	frame_shift_del	c.345	p.S117fs	1.000	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	AGPAT3	HGNC	ENSG00000160216				117	1	0.847458	83	18	17.8218
UBE2G2	0	genome.wustl.edu	37	21	46191156	46191157	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	46191156	46191157	AA	-	DEL	UBE2G2	ENST00000477954	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	UBE2G2	HGNC	ENSG00000184787				17	0	0	15	4	21.0526
PCNT	0	genome.wustl.edu	37	21	47862415	47862416	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	21	47862415	47862416	-	T	INS	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	frame_shift_ins	c.9629_9630	p.L3212fs	0.883:0.663	pfam_PACT_domain	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299				68	0	0	32	6	15.7895
TUBA8	0	genome.wustl.edu	37	22	18609266	18609266	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	18609266	18609266	C	-	DEL	TUBA8	ENST00000330423	human	ensembl	74_37	+1	known	frame_shift_del	c.521	p.Q176fs	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Epsilon_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA8	HGNC	ENSG00000183785				187	0	0	168	24	12.5
DGCR8	0	genome.wustl.edu	37	22	20094868	20094869	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	20094868	20094869	-	G	INS	DGCR8	ENST00000351989	human	ensembl	74_37	+1	known	frame_shift_ins	c.2071_2072	p.S693fs	1.000:1.000	NULL	pfam_dsRNA-bd_dom,superfamily_WW_dom,smart_WW_dom,smart_dsRNA-bd_dom,pfscan_WW_dom,pfscan_dsRNA-bd_dom	-	no_errors	DGCR8	HGNC	ENSG00000128191				146	0	0	127	23	15.3333
DGCR8	0	genome.wustl.edu	37	22	20097546	20097548	+	Splice_Site	DEL	AGG	AGG	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	20097546	20097548	AGG	-	DEL	DGCR8	ENST00000351989	human	ensembl	74_37	+1	known	splice_site_del	c.2239-2_2239-1	e13-1	0.983:1.000:1.000	-	-	-	no_errors	DGCR8	HGNC	ENSG00000128191				60	0	0	76	11	12.6437
BCR	0	genome.wustl.edu	37	22	23523586	23523586	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	23523586	23523586	C	-	DEL	BCR	ENST00000305877	human	ensembl	74_37	+1	known	frame_shift_del	c.439	p.A149fs	0.487	NULL	pfam_RhoGAP_dom,pfam_Bcr-Abl_oncoprot_oligo,pfam_DH-domain,pfam_C2_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_Bcr-Abl_oncoprot_oligo,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	BCR	HGNC	ENSG00000186716				33	0	0	31	5	13.8889
RFPL1S	0	genome.wustl.edu	37	22	29835329	29835329	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	29835329	29835329	A	-	DEL	RFPL1S	ENST00000461286	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RFPL1S	HGNC	ENSG00000225465				14	0	0	12	4	25
TBC1D10A	0	genome.wustl.edu	37	22	30691732	30691732	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	30691732	30691732	C	-	DEL	TBC1D10A	ENST00000215790	human	ensembl	74_37	-1	known	frame_shift_del	c.518	p.G173fs	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D10A	HGNC	ENSG00000099992				44	0	0	30	4	11.7647
ANKRD54	0	genome.wustl.edu	37	22	38229127	38229127	+	RNA	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	38229127	38229127	G	-	DEL	ANKRD54	ENST00000498417	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANKRD54	HGNC	ENSG00000100124				24	0	0	49	8	14.0351
JOSD1	0	genome.wustl.edu	37	22	39095945	39095946	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	39095945	39095946	-	A	INS	JOSD1	ENST00000216039	human	ensembl	74_37	-1	known	frame_shift_ins	c.48_47	p.L16fs	0.939:0.298	NULL	pfam_Josephin,pfscan_Josephin	-	no_errors	JOSD1	HGNC	ENSG00000100221				349	0	0	266	51	16.0883
ZBED4	0	genome.wustl.edu	37	22	50277679	50277679	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	50277679	50277679	T	-	DEL	ZBED4	ENST00000216268	human	ensembl	74_37	+1	known	frame_shift_del	c.369	p.F125fs	0.944	pfam_Znf_BED_prd,smart_Znf_BED_prd,pfscan_Znf_BED_prd	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED4	HGNC	ENSG00000100426				138	0	0	106	16	13.1148
SBF1	0	genome.wustl.edu	37	22	50898726	50898727	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	22	50898726	50898727	-	G	INS	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	frame_shift_ins	c.3258_3257	p.E1087fs	0.109:0.198	NULL	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241				81	0	0	97	16	14.1593
TBC1D23	0	genome.wustl.edu	37	3	100039736	100039736	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	100039736	100039736	A	-	DEL	TBC1D23	ENST00000394144	human	ensembl	74_37	+1	known	frame_shift_del	c.1939	p.K649fs	1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_Rhodanese-like_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Rhodanese-like_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Rhodanese-like_dom	-	no_errors	TBC1D23	HGNC	ENSG00000036054				138	0	0	75	19	20.2128
TFG	0	genome.wustl.edu	37	3	100463651	100463652	+	RNA	INS	-	-	TG			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	100463651	100463652	-	TG	INS	TFG	ENST00000481203	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.002	-	-	-	no_errors	TFG	HGNC	ENSG00000114354				189	1	0.526316	127	21	14.1892
KIAA1524	0	genome.wustl.edu	37	3	108301828	108301828	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	108301828	108301828	A	-	DEL	KIAA1524	ENST00000295746	human	ensembl	74_37	-1	known	frame_shift_del	c.353	p.L118fs	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA1524	HGNC	ENSG00000163507				55	0	0	34	12	26.087
PARP15	0	genome.wustl.edu	37	3	122345823	122345823	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	122345823	122345823	A	-	DEL	PARP15	ENST00000464300	human	ensembl	74_37	+1	known	frame_shift_del	c.1381	p.R463fs	0.149	pfscan_Macro_dom	pfam_Macro_dom,pfam_Poly(ADP-ribose)pol_cat_dom,smart_Macro_dom,pfscan_Macro_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP15	HGNC	ENSG00000173200				174	0	0	146	26	15.1163
ABTB1	0	genome.wustl.edu	37	3	127396605	127396605	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	127396605	127396605	C	-	DEL	ABTB1	ENST00000232744	human	ensembl	74_37	+1	known	frame_shift_del	c.948	p.P318fs	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Ankyrin_rpt,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like	-	no_errors	ABTB1	HGNC	ENSG00000114626				29	0	0	26	4	13.3333
CNTN6	0	genome.wustl.edu	37	3	1371501	1371501	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	1371501	1371501	A	-	DEL	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	frame_shift_del	c.1246	p.K418fs	0.992	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115				196	0	0	138	31	18.3432
PIK3CB	0	genome.wustl.edu	37	3	138413710	138413710	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	138413710	138413710	G	-	DEL	PIK3CB	ENST00000289153	human	ensembl	74_37	-1	known	frame_shift_del	c.1810	p.R604fs	0.240	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_C2_dom,superfamily_ARM-type_fold,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CB	HGNC	ENSG00000051382				147	0	0	118	19	13.8686
ENSG00000244327	0	genome.wustl.edu	37	3	142184164	142184165	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	142184164	142184165	AA	-	DEL	ENSG00000244327	ENST00000460977	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	RP11-383G6.3	Clone_based_vega_gene	ENSG00000244327				34	0	0	24	10	29.4118
PLSCR1	0	genome.wustl.edu	37	3	146234963	146234964	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	146234963	146234964	AA	-	DEL	PLSCR1	ENST00000484560	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.163:0.236	-	-	-	no_errors	PLSCR1	HGNC	ENSG00000188313				56	0	0	53	18	25.3521
DHX36	0	genome.wustl.edu	37	3	154032860	154032860	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	154032860	154032860	T	-	DEL	DHX36	ENST00000496811	human	ensembl	74_37	-1	known	frame_shift_del	c.578	p.N193fs	0.790	superfamily_P-loop_NTPase	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX36	HGNC	ENSG00000174953				127	1	0.78125	84	16	16
SEC62	0	genome.wustl.edu	37	3	169700664	169700664	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	169700664	169700664	A	-	DEL	SEC62	ENST00000337002	human	ensembl	74_37	+1	known	frame_shift_del	c.421	p.D144fs	1.000	pfam_Sec62,superfamily_ABC1_TM_dom	pfam_Sec62,superfamily_ABC1_TM_dom	-	no_errors	SEC62	HGNC	ENSG00000008952				59	0	0	47	12	20.339
GPR160	0	genome.wustl.edu	37	3	169802469	169802469	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	169802469	169802469	A	-	DEL	GPR160	ENST00000355897	human	ensembl	74_37	+1	known	frame_shift_del	c.709	p.I239fs	0.030	pfscan_GPCR_Rhodpsn_7TM	pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR160	HGNC	ENSG00000173890				223	0	0	134	31	18.7879
TBC1D5	0	genome.wustl.edu	37	3	17255753	17255753	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	17255753	17255753	A	-	DEL	TBC1D5	ENST00000253692	human	ensembl	74_37	-1	known	frame_shift_del	c.1698	p.F566fs	0.092	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D5	HGNC	ENSG00000131374				130	0	0	86	22	20.3704
IL1RAP	0	genome.wustl.edu	37	3	190341140	190341140	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	190341140	190341140	A	-	DEL	IL1RAP	ENST00000443369	human	ensembl	74_37	+1	known	frame_shift_del	c.711	p.N239fs	0.953	NULL	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom,prints_IL-1_rcpt_I/II-typ	-	no_errors	IL1RAP	HGNC	ENSG00000196083				188	0	0	122	32	20.7792
IL1RAP	0	genome.wustl.edu	37	3	190345194	190345194	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	190345194	190345194	A	-	DEL	IL1RAP	ENST00000443369	human	ensembl	74_37	+1	known	frame_shift_del	c.858	p.K288fs	0.994	smart_Ig_sub,pfscan_Ig-like_dom	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom,prints_IL-1_rcpt_I/II-typ	-	no_errors	IL1RAP	HGNC	ENSG00000196083				150	0	0	120	16	11.7647
TNK2	0	genome.wustl.edu	37	3	195595228	195595229	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	195595228	195595229	-	G	INS	TNK2	ENST00000381916	human	ensembl	74_37	-1	known	frame_shift_ins	c.2130_2129	p.P711fs	0.449:0.994	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cdc42_binding_dom_like,pfam_Inhibitor_Mig-6,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	TNK2	HGNC	ENSG00000061938				30	0	0	30	3	9.09091
SGOL1	0	genome.wustl.edu	37	3	20212755	20212756	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	20212755	20212756	AA	-	DEL	SGOL1	ENST00000460637	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SGOL1	HGNC	ENSG00000129810				54	0	0	52	8	13.3333
RARB	0	genome.wustl.edu	37	3	25502726	25502727	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	25502726	25502727	-	C	INS	RARB	ENST00000404969	human	ensembl	74_37	+1	known	frame_shift_ins	c.221_222	p.S77fs	1.000:1.000	prints_Retinoic_acid_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARB	HGNC	ENSG00000077092				159	0	0	118	23	16.3121
CELSR3	0	genome.wustl.edu	37	3	48689915	48689915	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	48689915	48689915	G	-	DEL	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	frame_shift_del	c.5706	p.G1903fs	0.001	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				95	0	0	75	9	10.7143
P4HTM	0	genome.wustl.edu	37	3	49042564	49042565	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	49042564	49042565	-	T	INS	P4HTM	ENST00000343546	human	ensembl	74_37	+1	known	frame_shift_ins	c.1158_1159	p.P386fs	0.001:0.003	smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	P4HTM	HGNC	ENSG00000178467				97	0	0	82	22	21.1538
BSN	0	genome.wustl.edu	37	3	49694496	49694496	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	49694496	49694496	C	-	DEL	BSN	ENST00000296452	human	ensembl	74_37	+1	known	frame_shift_del	c.7507	p.T2506fs	1.000	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061				78	0	0	66	7	9.58904
RBM6	0	genome.wustl.edu	37	3	50005145	50005145	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	50005145	50005145	G	-	DEL	RBM6	ENST00000266022	human	ensembl	74_37	+1	known	frame_shift_del	c.287	p.G98fs	1.000	NULL	pfam_G_patch_dom,smart_RRM_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM6	HGNC	ENSG00000004534				216	1	0.460829	184	39	17.4888
PBRM1	0	genome.wustl.edu	37	3	52610623	52610623	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	52610623	52610623	T	-	DEL	PBRM1	ENST00000296302	human	ensembl	74_37	-1	known	frame_shift_del	c.3625	p.M1209fs	1.000	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	pfam_Bromodomain,pfam_BAH_dom,pfam_HMG_box_dom,superfamily_Bromodomain,superfamily_HMG_box_dom,smart_Bromodomain,smart_BAH_dom,smart_HMG_box_dom,pfscan_BAH_dom,pfscan_HMG_box_dom,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	PBRM1	HGNC	ENSG00000163939				177	0	0	145	24	14.2012
APPL1	0	genome.wustl.edu	37	3	57276921	57276921	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	57276921	57276921	A	-	DEL	APPL1	ENST00000288266	human	ensembl	74_37	+1	known	frame_shift_del	c.453	p.R154fs	0.881	NULL	pfam_PTB/PI_dom,smart_Pleckstrin_homology,smart_PTB/PI_dom,pfscan_Pleckstrin_homology,pfscan_PTB/PI_dom	-	no_errors	APPL1	HGNC	ENSG00000157500				130	0	0	120	16	11.7647
PTPRG	0	genome.wustl.edu	37	3	62189498	62189498	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	62189498	62189498	C	-	DEL	PTPRG	ENST00000474889	human	ensembl	74_37	+1	known	frame_shift_del	c.2029	p.T679fs	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRG	HGNC	ENSG00000144724				50	0	0	34	11	24.4444
EPHA3	0	genome.wustl.edu	37	3	89499363	89499363	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	89499363	89499363	C	-	DEL	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	frame_shift_del	c.2533	p.M847fs	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524				107	0	0	87	7	7.44681
ARL13B	0	genome.wustl.edu	37	3	93755447	93755447	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	93755447	93755447	A	-	DEL	ARL13B	ENST00000394222	human	ensembl	74_37	+1	known	frame_shift_del	c.538	p.G182fs	1.000	pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL13B	HGNC	ENSG00000169379				144	0	0	115	21	15.4412
GPR15	0	genome.wustl.edu	37	3	98251024	98251024	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	98251024	98251024	G	-	DEL	GPR15	ENST00000284311	human	ensembl	74_37	+1	known	frame_shift_del	c.147	p.N51fs	0.532	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srg,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_ATII_rcpt	-	no_errors	GPR15	HGNC	ENSG00000154165				104	0	0	109	19	14.8438
TTLL3	0	genome.wustl.edu	37	3	9859427	9859428	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	9859427	9859428	-	A	INS	TTLL3	ENST00000426895	human	ensembl	74_37	+1	known	frame_shift_ins	c.843_844	p.A283fs	0.996:1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL3	HGNC	ENSG00000214021				156	0	0	151	34	18.3784
IL17RC	0	genome.wustl.edu	37	3	9958948	9958948	+	RNA	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	3	9958948	9958948	G	-	DEL	IL17RC	ENST00000498214	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IL17RC	HGNC	ENSG00000163702				20	0	0	14	5	26.3158
BANK1	0	genome.wustl.edu	37	4	102946605	102946605	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	102946605	102946605	C	-	DEL	BANK1	ENST00000322953	human	ensembl	74_37	+1	known	frame_shift_del	c.1533	p.P513fs	0.001	NULL	superfamily_Ankyrin_rpt-contain_dom	-	no_errors	BANK1	HGNC	ENSG00000153064				54	0	0	54	5	8.47458
ZNF518B	0	genome.wustl.edu	37	4	10446690	10446690	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	10446690	10446690	A	-	DEL	ZNF518B	ENST00000326756	human	ensembl	74_37	-1	known	frame_shift_del	c.1263	p.Q422fs	0.007	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF518B	HGNC	ENSG00000178163				360	0	0	314	17	5.13595
TBCK	0	genome.wustl.edu	37	4	107156505	107156505	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	107156505	107156505	T	-	DEL	TBCK	ENST00000273980	human	ensembl	74_37	-1	known	frame_shift_del	c.1370	p.N457fs	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Rhodanese-like_dom,superfamily_Kinase-like_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Rhodanese-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Rab-GTPase-TBC_dom,smart_Rhodanese-like_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Prot_kinase_dom,pfscan_Rhodanese-like_dom	-	no_errors	TBCK	HGNC	ENSG00000145348				67	0	0	45	5	10
ETNPPL	0	genome.wustl.edu	37	4	109675790	109675791	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	109675790	109675791	-	T	INS	ETNPPL	ENST00000296486	human	ensembl	74_37	-1	known	frame_shift_ins	c.487_486	p.E162fs	0.998:0.861	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	-	no_errors	ETNPPL	HGNC	ENSG00000164089				154	0	0	133	23	14.7436
ALPK1	0	genome.wustl.edu	37	4	113352134	113352135	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	113352134	113352135	-	A	INS	ALPK1	ENST00000177648	human	ensembl	74_37	+1	known	frame_shift_ins	c.1431_1432	p.N478fs	0.000:0.000	NULL	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	ALPK1	HGNC	ENSG00000073331				142	0	0	93	25	21.1864
ANK2	0	genome.wustl.edu	37	4	114294543	114294543	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	114294543	114294543	G	-	DEL	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	frame_shift_del	c.11797	p.D3934fs	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				231	0	0	177	45	20.2703
ARSJ	0	genome.wustl.edu	37	4	114823938	114823938	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	114823938	114823938	T	-	DEL	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	frame_shift_del	c.1292	p.N431fs	0.996	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801				245	0	0	227	12	5.02092
SCLT1	0	genome.wustl.edu	37	4	129924995	129924995	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	129924995	129924995	T	-	DEL	SCLT1	ENST00000281142	human	ensembl	74_37	-1	known	frame_shift_del	c.327	p.K109fs	0.840	NULL	NULL	-	no_errors	SCLT1	HGNC	ENSG00000151466				192	0	0	141	26	15.5689
PCDH10	0	genome.wustl.edu	37	4	134071648	134071649	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	134071648	134071649	-	C	INS	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	frame_shift_ins	c.353_354	p.S121fs	1.000:1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650				120	0	0	105	15	12.5
SMARCA5	0	genome.wustl.edu	37	4	144469153	144469155	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	144469153	144469155	GAA	-	DEL	SMARCA5	ENST00000283131	human	ensembl	74_37	+1	known	in_frame_del	c.2845_2847	p.E951in_frame_del	1.000:1.000:1.000	pfam_SLIDE,superfamily_Homeodomain-like,smart_SANT/Myb	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_HDA_complex_subunit-2/3,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA5	HGNC	ENSG00000153147				134	0	0	108	13	10.7438
HHIP	0	genome.wustl.edu	37	4	145658978	145658978	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	145658978	145658978	A	-	DEL	HHIP	ENST00000296575	human	ensembl	74_37	+1	known	frame_shift_del	c.1972	p.G660fs	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Folate_rcpt-like,superfamily_Quinoprot_gluc/sorb_DH,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HHIP	HGNC	ENSG00000164161				179	0	0	120	22	15.493
CPEB2	0	genome.wustl.edu	37	4	15067858	15067858	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	15067858	15067858	T	-	DEL	CPEB2	ENST00000538197	human	ensembl	74_37	+1	known	frame_shift_del	c.2959	p.C989fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPEB2	HGNC	ENSG00000137449				186	0	0	155	33	17.5532
MAB21L2	0	genome.wustl.edu	37	4	151504961	151504961	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	151504961	151504961	C	-	DEL	MAB21L2	ENST00000317605	human	ensembl	74_37	+1	known	frame_shift_del	c.780	p.H261fs	0.993	pfam_Mab-21_dom,pfscan_Ricin_B_lectin	pfam_Mab-21_dom,pfscan_Ricin_B_lectin	-	no_errors	MAB21L2	HGNC	ENSG00000181541				36	0	0	48	3	5.88235
FBXW7	0	genome.wustl.edu	37	4	153244114	153244115	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	153244114	153244115	-	T	INS	FBXW7	ENST00000281708	human	ensembl	74_37	-1	known	frame_shift_ins	c.2043_2042	p.L682fs	1.000:1.000	smart_WD40_repeat	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC	ENSG00000109670				306	0	0	249	59	19.1558
FGB	0	genome.wustl.edu	37	4	155488796	155488797	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	155488796	155488797	TA	-	DEL	FGB	ENST00000302068	human	ensembl	74_37	+1	known	frame_shift_del	c.542_543	p.I183fs	0.002:0.001	pfam_Fibrinogen_a/b/g_coil_dom	pfam_Fibrinogen_a/b/g_C_dom,pfam_Fibrinogen_a/b/g_coil_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGB	HGNC	ENSG00000171564				236	0	0	205	40	16.3265
DDX60	0	genome.wustl.edu	37	4	169182016	169182016	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	169182016	169182016	A	-	DEL	DDX60	ENST00000393743	human	ensembl	74_37	-1	known	frame_shift_del	c.3398	p.L1133fs	0.961	superfamily_P-loop_NTPase	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX60	HGNC	ENSG00000137628				146	0	0	100	23	18.6992
TENM3	0	genome.wustl.edu	37	4	183714567	183714567	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	183714567	183714567	T	-	DEL	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	frame_shift_del	c.6742	p.Y2250fs	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336				121	0	0	74	15	16.8539
WWC2	0	genome.wustl.edu	37	4	184166576	184166576	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	184166576	184166576	A	-	DEL	WWC2	ENST00000448232	human	ensembl	74_37	+1	known	frame_shift_del	c.610	p.M206fs	1.000	NULL	pfam_WW_dom,superfamily_C2_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWC2	HGNC	ENSG00000151718				29	0	0	20	9	31.0345
NOP14-AS1	0	genome.wustl.edu	37	4	2952779	2952780	+	RNA	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	2952779	2952780	-	A	INS	NOP14-AS1	ENST00000515194	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NOP14-AS1	HGNC	ENSG00000249673				147	0	0	104	15	12.605
GRK4	0	genome.wustl.edu	37	4	3040280	3040283	+	RNA	DEL	AAAA	AAAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	3040280	3040283	AAAA	-	DEL	GRK4	ENST00000504308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.003:0.005:0.010	-	-	-	no_errors	GRK4	HGNC	ENSG00000125388				76	0	0	79	15	15.9574
RGS12	0	genome.wustl.edu	37	4	3388122	3388123	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	3388122	3388123	TC	-	DEL	RGS12	ENST00000538395	human	ensembl	74_37	+1	known	frame_shift_del	c.4_5	p.L5fs	1.000:1.000	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788				202	0	0	151	19	11.1765
RGS12	0	genome.wustl.edu	37	4	3430399	3430399	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	3430399	3430399	A	-	DEL	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	frame_shift_del	c.3526	p.K1178fs	1.000	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788				136	1	0.729927	114	29	20.2797
KLF3	0	genome.wustl.edu	37	4	38691476	38691476	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	38691476	38691476	C	-	DEL	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	frame_shift_del	c.671	p.P226fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787				304	0	0	242	58	19.3333
TLR10	0	genome.wustl.edu	37	4	38774956	38774956	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	38774956	38774956	T	-	DEL	TLR10	ENST00000308973	human	ensembl	74_37	-1	known	frame_shift_del	c.2256	p.A753fs	0.718	pirsf_Toll-like_receptor,pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR10	HGNC	ENSG00000174123				235	0	0	158	39	19.797
TLR6	0	genome.wustl.edu	37	4	38830853	38830853	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	38830853	38830853	A	-	DEL	TLR6	ENST00000381950	human	ensembl	74_37	-1	known	frame_shift_del	c.242	p.L81fs	1.000	pirsf_Toll-like_receptor,smart_Leu-rich_rpt_typical-subtyp	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,pfam_Cys-rich_flank_reg_C,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR6	HGNC	ENSG00000174130				170	0	0	105	39	27.0833
C4orf6	0	genome.wustl.edu	37	4	5527116	5527116	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	5527116	5527116	T	-	DEL	C4orf6	ENST00000195455	human	ensembl	74_37	+1	known	frame_shift_del	c.59	p.F23fs	0.077	NULL	NULL	-	no_errors	C4orf6	HGNC	ENSG00000082929				29	0	0	37	7	15.9091
TMEM165	0	genome.wustl.edu	37	4	56277913	56277913	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	56277913	56277913	T	-	DEL	TMEM165	ENST00000381334	human	ensembl	74_37	+1	known	frame_shift_del	c.340	p.F115fs	0.998	pfam_UPF0016	pfam_UPF0016	-	no_errors	TMEM165	HGNC	ENSG00000134851				96	0	0	72	12	14.2857
EVC2	0	genome.wustl.edu	37	4	5633548	5633549	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	5633548	5633549	-	T	INS	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	frame_shift_ins	c.1682_1681	p.M561fs	0.001:0.003	pfam_Limbin	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040				279	0	0	214	39	15.415
EXOC1	0	genome.wustl.edu	37	4	56765964	56765965	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	56765964	56765965	-	A	INS	EXOC1	ENST00000346134	human	ensembl	74_37	+1	known	frame_shift_ins	c.2251_2252	p.E754fs	1.000:1.000	pfam_Exocyst_Exoc1/SEC3	pfam_Exocyst_Exoc1/SEC3	-	no_errors	EXOC1	HGNC	ENSG00000090989				219	0	0	154	35	18.5185
KIAA1211	0	genome.wustl.edu	37	4	57179503	57179503	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	57179503	57179503	A	-	DEL	KIAA1211	ENST00000504228	human	ensembl	74_37	+1	known	frame_shift_del	c.495	p.K167fs	0.997	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265				171	1	0.581395	144	25	14.7929
ENAM	0	genome.wustl.edu	37	4	71503555	71503555	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	71503555	71503555	G	-	DEL	ENAM	ENST00000396073	human	ensembl	74_37	+1	known	frame_shift_del	c.583	p.N197fs	0.994	NULL	NULL	-	no_errors	ENAM	HGNC	ENSG00000132464				212	0	0	183	20	9.85222
AFM	0	genome.wustl.edu	37	4	74347532	74347532	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	74347532	74347532	T	-	DEL	AFM	ENST00000226355	human	ensembl	74_37	+1	known	frame_shift_del	c.40	p.L16fs	0.970	pirsf_Serum_albumin/AFP	pirsf_Serum_albumin/AFP,pfam_Serum_albumin_N,superfamily_Serum_albumin-like,smart_Serum_albumin_N,prints_ALB/AFP/VDB,prints_Alpha-fetoprotein	-	no_errors	AFM	HGNC	ENSG00000079557				126	0	0	90	18	16.6667
C4orf26	0	genome.wustl.edu	37	4	76489680	76489680	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	76489680	76489680	A	-	DEL	C4orf26	ENST00000435974	human	ensembl	74_37	+1	putative	frame_shift_del	c.468	p.S159fs	0.001	NULL	NULL	-	no_errors	C4orf26	HGNC	ENSG00000174792				194	0	0	169	33	16.3366
ABLIM2	0	genome.wustl.edu	37	4	8021936	8021937	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	8021936	8021937	-	T	INS	ABLIM2	ENST00000447017	human	ensembl	74_37	-1	known	frame_shift_ins	c.1362_1361	p.H454fs	1.000:1.000	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM2	HGNC	ENSG00000163995				37	0	0	39	9	18.75
ANTXR2	0	genome.wustl.edu	37	4	80905990	80905990	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	80905990	80905990	C	-	DEL	ANTXR2	ENST00000307333	human	ensembl	74_37	-1	known	frame_shift_del	c.1069	p.A357fs	0.559	pirsf_Anthrax_toxin_rcpt	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_C,pfam_Anthrax_toxin_rcpt_extracel,pfam_VWF_A,superfamily_Ig_E-set,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXR2	HGNC	ENSG00000163297				22	0	0	15	4	21.0526
C4orf22	0	genome.wustl.edu	37	4	81791254	81791254	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	81791254	81791254	A	-	DEL	C4orf22	ENST00000508675	human	ensembl	74_37	+1	known	frame_shift_del	c.492	p.R167fs	0.769	NULL	NULL	-	no_errors	C4orf22	HGNC	ENSG00000197826				212	2	0.934579	154	26	14.4444
SEC31A	0	genome.wustl.edu	37	4	83785565	83785565	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	83785565	83785565	T	-	DEL	SEC31A	ENST00000432794	human	ensembl	74_37	-1	known	frame_shift_del	c.1384	p.I462fs	0.985	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31A	HGNC	ENSG00000138674				148	0	0	107	22	17.0543
GRID2	0	genome.wustl.edu	37	4	93225753	93225754	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	4	93225753	93225754	AA	-	DEL	GRID2	ENST00000505687	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	GRID2	HGNC	ENSG00000152208				39	0	0	35	9	20.4545
GIN1	0	genome.wustl.edu	37	5	102442607	102442607	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	102442607	102442607	T	-	DEL	GIN1	ENST00000399004	human	ensembl	74_37	-1	known	frame_shift_del	c.146	p.K49fs	1.000	NULL	pfam_Integrase_cat-core,pfam_Znf_H2C2_histone_UAS-bd,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	-	no_errors	GIN1	HGNC	ENSG00000145723				44	0	0	43	5	10.4167
EPB41L4A	0	genome.wustl.edu	37	5	111500730	111500731	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	111500730	111500731	-	T	INS	EPB41L4A	ENST00000261486	human	ensembl	74_37	-1	known	frame_shift_ins	c.2018_2017	p.T673fs	0.998:1.000	NULL	pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L4A	HGNC	ENSG00000129595				89	0	0	81	13	13.8298
RAPGEF6	0	genome.wustl.edu	37	5	130782332	130782332	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	130782332	130782332	T	-	DEL	RAPGEF6	ENST00000509018	human	ensembl	74_37	-1	known	frame_shift_del	c.3265	p.R1089fs	1.000	superfamily_Ras_GEF_dom,smart_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_PDZ,pfam_Ras-assoc,pfam_cNMP-bd_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF6	HGNC	ENSG00000158987				308	0	0	253	52	17.0492
ACSL6	0	genome.wustl.edu	37	5	131329853	131329854	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	131329853	131329854	-	A	INS	ACSL6	ENST00000296869	human	ensembl	74_37	-1	known	frame_shift_ins	c.141_140	p.R48fs	1.000:1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL6	HGNC	ENSG00000164398				55	0	0	50	3	5.66038
ARAP3	0	genome.wustl.edu	37	5	141052870	141052870	+	RNA	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	141052870	141052870	G	-	DEL	ARAP3	ENST00000524066	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	ARAP3	HGNC	ENSG00000120318				16	0	0	13	5	27.7778
NDFIP1	0	genome.wustl.edu	37	5	141511526	141511527	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	141511526	141511527	AA	-	DEL	NDFIP1	ENST00000509436	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NDFIP1	HGNC	ENSG00000131507				62	0	0	61	23	27.381
KCTD16	0	genome.wustl.edu	37	5	143853531	143853531	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	143853531	143853531	A	-	DEL	KCTD16	ENST00000507359	human	ensembl	74_37	+1	known	frame_shift_del	c.1141	p.A384fs	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD16	HGNC	ENSG00000183775				118	1	0.840336	134	30	18.2927
TCERG1	0	genome.wustl.edu	37	5	145886723	145886723	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	145886723	145886723	A	-	DEL	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	frame_shift_del	c.2863	p.K957fs	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649				253	1	0.393701	181	41	18.4685
SPINK5	0	genome.wustl.edu	37	5	147481387	147481387	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	147481387	147481387	T	-	DEL	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	frame_shift_del	c.1346	p.C451fs	0.045	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710				150	0	0	115	21	15.4412
CSF1R	0	genome.wustl.edu	37	5	149460476	149460476	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	149460476	149460476	G	-	DEL	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	frame_shift_del	c.161	p.P54fs	0.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,smart_Ig_sub,pfscan_Ig-like_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578				75	0	0	73	9	10.9756
SYNPO	0	genome.wustl.edu	37	5	150028880	150028881	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	150028880	150028881	-	C	INS	SYNPO	ENST00000394243	human	ensembl	74_37	+1	known	frame_shift_ins	c.1775_1776	p.K594fs	0.984:0.931	NULL	NULL	-	no_errors	SYNPO	HGNC	ENSG00000171992				148	0	0	121	18	12.9496
FAM114A2	0	genome.wustl.edu	37	5	153382463	153382465	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	153382463	153382465	CTT	-	DEL	FAM114A2	ENST00000351797	human	ensembl	74_37	-1	known	in_frame_del	c.1060_1058	p.E353in_frame_del	1.000:1.000:1.000	NULL	pfam_DUF719	-	no_errors	FAM114A2	HGNC	ENSG00000055147				423	0	0	325	52	13.7931
MYO10	0	genome.wustl.edu	37	5	16694606	16694606	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	16694606	16694606	C	-	DEL	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	frame_shift_del	c.3674	p.G1225fs	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555				132	0	0	125	27	17.7632
ZFR	0	genome.wustl.edu	37	5	32404161	32404161	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	32404161	32404161	T	-	DEL	ZFR	ENST00000265069	human	ensembl	74_37	-1	known	frame_shift_del	c.1074	p.E359fs	1.000	smart_Znf_U1	pfam_DZF,pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR	HGNC	ENSG00000056097				267	0	0	208	36	14.7541
NIPBL	0	genome.wustl.edu	37	5	36985083	36985083	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	36985083	36985083	A	-	DEL	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	frame_shift_del	c.1801	p.K603fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				158	0	0	130	8	5.7971
PLK2	0	genome.wustl.edu	37	5	57753012	57753012	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	57753012	57753012	A	-	DEL	PLK2	ENST00000274289	human	ensembl	74_37	-1	known	frame_shift_del	c.1004	p.L335fs	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK2	HGNC	ENSG00000145632				91	0	0	79	16	16.8421
CD180	0	genome.wustl.edu	37	5	66478727	66478727	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	66478727	66478727	A	-	DEL	CD180	ENST00000256447	human	ensembl	74_37	-1	known	frame_shift_del	c.1944	p.F648fs	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	CD180	HGNC	ENSG00000134061				98	0	0	91	17	15.7407
WDR41	0	genome.wustl.edu	37	5	76728856	76728856	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	76728856	76728856	A	-	DEL	WDR41	ENST00000512033	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.004	-	-	-	no_errors	WDR41	HGNC	ENSG00000164253				68	0	0	46	7	13.2075
MSH3	0	genome.wustl.edu	37	5	79970915	79970915	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	79970915	79970915	A	-	DEL	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	frame_shift_del	c.1141	p.K383fs	0.982	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318				333	0	0	209	80	27.6817
CETN3	0	genome.wustl.edu	37	5	89701581	89701581	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	5	89701581	89701581	T	-	DEL	CETN3	ENST00000283122	human	ensembl	74_37	-1	known	frame_shift_del	c.189	p.A64fs	1.000	pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CETN3	HGNC	ENSG00000153140				169	0	0	121	16	11.6788
MCHR2	0	genome.wustl.edu	37	6	100382358	100382358	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	100382358	100382358	A	-	DEL	MCHR2	ENST00000281806	human	ensembl	74_37	-1	known	frame_shift_del	c.623	p.F208fs	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_MCH2_receptor,prints_GPCR_Rhodpsn,prints_MCH_rcpt	-	no_errors	MCHR2	HGNC	ENSG00000152034				229	2	0.865801	181	31	14.6226
MARCKS	0	genome.wustl.edu	37	6	114181210	114181211	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	114181210	114181211	AA	-	DEL	MARCKS	ENST00000368635	human	ensembl	74_37	+1	known	frame_shift_del	c.454_455	p.K155fs	1.000:1.000	pfam_MARCKS	pfam_MARCKS,prints_MARCKS	-	no_errors	MARCKS	HGNC	ENSG00000155130				22	0	0	33	8	19.5122
HS3ST5	0	genome.wustl.edu	37	6	114379084	114379084	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	114379084	114379084	A	-	DEL	HS3ST5	ENST00000312719	human	ensembl	74_37	-1	known	frame_shift_del	c.378	p.F126fs	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST5	HGNC	ENSG00000249853				299	0	0	240	53	18.0887
FAM184A	0	genome.wustl.edu	37	6	119345777	119345777	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	119345777	119345777	T	-	DEL	FAM184A	ENST00000338891	human	ensembl	74_37	-1	known	frame_shift_del	c.361	p.M121fs	1.000	NULL	superfamily_Prefoldin	-	no_errors	FAM184A	HGNC	ENSG00000111879				160	0	0	122	17	12.2302
NCOA7	0	genome.wustl.edu	37	6	126176317	126176317	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	126176317	126176317	A	-	DEL	NCOA7	ENST00000368357	human	ensembl	74_37	+1	known	frame_shift_del	c.202	p.K70fs	1.000	NULL	pfam_TLDc,pfam_LysM_dom,pfam_GRAM,smart_LysM_dom,smart_TLDc	-	no_errors	NCOA7	HGNC	ENSG00000111912				268	0	0	251	41	14.0411
ENSG00000227678	0	genome.wustl.edu	37	6	130454856	130454856	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	130454856	130454856	T	-	DEL	ENSG00000227678	ENST00000415964	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.125	-	-	-	no_errors	RP11-73O6.3	Clone_based_vega_gene	ENSG00000227678				42	0	0	32	12	27.2727
ARG1	0	genome.wustl.edu	37	6	131894346	131894346	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	131894346	131894346	A	-	DEL	ARG1	ENST00000469293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.285	-	-	-	no_errors	ARG1	HGNC	ENSG00000118520				55	0	0	48	6	11.1111
MED23	0	genome.wustl.edu	37	6	131917389	131917389	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	131917389	131917389	T	-	DEL	MED23	ENST00000479213	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MED23	HGNC	ENSG00000112282				18	0	0	17	6	26.087
VNN1	0	genome.wustl.edu	37	6	133035130	133035131	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	133035130	133035131	AT	-	DEL	VNN1	ENST00000367928	human	ensembl	74_37	-1	known	frame_shift_del	c.45_44	p.Y15fs	0.000:0.279	pirsf_Biotinidase_euk	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	-	no_errors	VNN1	HGNC	ENSG00000112299				92	0	0	84	10	10.6383
CCDC28A	0	genome.wustl.edu	37	6	139097330	139097330	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	139097330	139097330	A	-	DEL	CCDC28A	ENST00000332797	human	ensembl	74_37	+1	known	frame_shift_del	c.343	p.N117fs	1.000	NULL	NULL	-	no_errors	CCDC28A	HGNC	ENSG00000024862				182	1	0.546448	145	21	12.6506
GPR126	0	genome.wustl.edu	37	6	142718831	142718831	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	142718831	142718831	A	-	DEL	GPR126	ENST00000367609	human	ensembl	74_37	+1	known	frame_shift_del	c.1506	p.N504fs	0.254	NULL	pfam_GPCR_2_secretin-like,pfam_CUB_dom,pfam_GPS_dom,pfam_Pentaxin,superfamily_CUB_dom,superfamily_ConA-like_lec_gl_sf,smart_CUB_dom,smart_Pentaxin,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR126	HGNC	ENSG00000112414				90	0	0	62	12	16.2162
KATNBL1P6	0	genome.wustl.edu	37	6	147124761	147124762	+	RNA	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	147124761	147124762	-	T	INS	KATNBL1P6	ENST00000562413	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.941:0.936	-	-	-	no_errors	KATNBL1P6	HGNC	ENSG00000228283				84	0	0	67	8	10.6667
FBXO5	0	genome.wustl.edu	37	6	153292227	153292227	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	153292227	153292227	T	-	DEL	FBXO5	ENST00000477822	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FBXO5	HGNC	ENSG00000112029				46	0	0	32	9	21.9512
MTRF1L	0	genome.wustl.edu	37	6	153319770	153319770	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	153319770	153319770	A	-	DEL	MTRF1L	ENST00000485283	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	MTRF1L	HGNC	ENSG00000112031				67	0	0	56	8	12.5
WTAP	0	genome.wustl.edu	37	6	160157395	160157395	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	160157395	160157395	A	-	DEL	WTAP	ENST00000494513	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WTAP	HGNC	ENSG00000146457				106	0	0	61	13	17.5676
RBM24	0	genome.wustl.edu	37	6	17292449	17292449	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	17292449	17292449	A	-	DEL	RBM24	ENST00000508508	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.915	-	-	-	no_errors	RBM24	HGNC	ENSG00000112183				43	0	0	34	8	19.0476
ZKSCAN4	0	genome.wustl.edu	37	6	28219672	28219674	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	28219672	28219674	CTT	-	DEL	ZKSCAN4	ENST00000377294	human	ensembl	74_37	-1	known	in_frame_del	c.87_85	p.K29in_frame_del	0.057:0.013:0.003	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN4	HGNC	ENSG00000187626				162	0	0	141	31	18.0233
PGBD1	0	genome.wustl.edu	37	6	28269629	28269630	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	28269629	28269630	-	A	INS	PGBD1	ENST00000259883	human	ensembl	74_37	+1	known	frame_shift_ins	c.1998_1999	p.M668fs	1.000:1.000	NULL	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,pfscan_SRCR,pfscan_Tscrpt_reg_SCAN	-	no_errors	PGBD1	HGNC	ENSG00000137338				229	0	0	168	38	18.4466
PPP1R2P1	0	genome.wustl.edu	37	6	32847201	32847201	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	32847201	32847201	T	-	DEL	PPP1R2P1	ENST00000420261	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	PPP1R2P1	HGNC	ENSG00000234515				43	0	0	43	11	20.3704
SYNGAP1	0	genome.wustl.edu	37	6	33405837	33405837	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	33405837	33405837	G	-	DEL	SYNGAP1	ENST00000418600	human	ensembl	74_37	+1	known	frame_shift_del	c.1155	p.G387fs	0.009	NULL	pfam_DUF3498,pfam_RasGAP,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	SYNGAP1	HGNC	ENSG00000197283				35	0	0	40	11	21.5686
ZBTB9	0	genome.wustl.edu	37	6	33424006	33424006	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	33424006	33424006	C	-	DEL	ZBTB9	ENST00000395064	human	ensembl	74_37	+1	known	frame_shift_del	c.1129	p.P378fs	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB9	HGNC	ENSG00000213588				58	0	0	50	10	16.6667
UHRF1BP1	0	genome.wustl.edu	37	6	34839369	34839369	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	34839369	34839369	C	-	DEL	UHRF1BP1	ENST00000192788	human	ensembl	74_37	+1	known	frame_shift_del	c.3990	p.I1333fs	1.000	NULL	NULL	-	no_errors	UHRF1BP1	HGNC	ENSG00000065060				156	0	0	103	22	17.6
PRPF4B	0	genome.wustl.edu	37	6	4052975	4052975	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	4052975	4052975	A	-	DEL	PRPF4B	ENST00000337659	human	ensembl	74_37	+1	known	frame_shift_del	c.2334	p.K780fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PRPF4B	HGNC	ENSG00000112739				111	0	0	85	6	6.59341
PTCHD4	0	genome.wustl.edu	37	6	47846151	47846151	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	47846151	47846151	A	-	DEL	PTCHD4	ENST00000339488	human	ensembl	74_37	-1	known	frame_shift_del	c.2429	p.F810fs	1.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD4	HGNC	ENSG00000244694				196	0	0	162	35	17.7665
DST	0	genome.wustl.edu	37	6	56499695	56499695	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	56499695	56499695	T	-	DEL	DST	ENST00000370754	human	ensembl	74_37	-1	known	frame_shift_del	c.3144	p.A1049fs	1.000	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				335	0	0	227	60	20.9059
EYS	0	genome.wustl.edu	37	6	66205125	66205125	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	66205125	66205125	A	-	DEL	EYS	ENST00000370616	human	ensembl	74_37	-1	known	frame_shift_del	c.179	p.L60fs	0.000	NULL	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107				319	1	0.3125	249	61	19.6774
SMAP1	0	genome.wustl.edu	37	6	71508370	71508370	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	71508370	71508370	A	-	DEL	SMAP1	ENST00000370455	human	ensembl	74_37	+1	known	frame_shift_del	c.506	p.K172fs	1.000	NULL	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	SMAP1	HGNC	ENSG00000112305				8	0	0	3	4	57.1429
RREB1	0	genome.wustl.edu	37	6	7232077	7232077	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	7232077	7232077	C	-	DEL	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	frame_shift_del	c.3745	p.H1250fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				52	0	0	70	9	11.3924
COL12A1	0	genome.wustl.edu	37	6	75893269	75893269	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	75893269	75893269	A	-	DEL	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	frame_shift_del	c.1388	p.L463fs	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				168	0	0	148	32	17.7778
SENP6	0	genome.wustl.edu	37	6	76425169	76425169	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	76425169	76425169	A	-	DEL	SENP6	ENST00000370014	human	ensembl	74_37	+1	known	frame_shift_del	c.3198	p.R1068fs	0.983	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP6	HGNC	ENSG00000112701				213	0	0	156	36	18.75
TTK	0	genome.wustl.edu	37	6	80720630	80720630	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	80720630	80720630	A	-	DEL	TTK	ENST00000369798	human	ensembl	74_37	+1	known	frame_shift_del	c.569	p.K192fs	0.007	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTK	HGNC	ENSG00000112742				201	0	0	173	28	13.9303
SYNCRIP	0	genome.wustl.edu	37	6	86332349	86332350	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	86332349	86332350	CT	-	DEL	SYNCRIP	ENST00000369622	human	ensembl	74_37	-1	known	frame_shift_del	c.859_858	p.G287fs	1.000:1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	SYNCRIP	HGNC	ENSG00000135316				365	0	0	236	34	12.5926
USP45	0	genome.wustl.edu	37	6	99894246	99894246	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	6	99894246	99894246	C	-	DEL	USP45	ENST00000327681	human	ensembl	74_37	-1	known	frame_shift_del	c.1402	p.D468fs	0.106	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_UBP,superfamily_Znf_FYVE_PHD,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP45	HGNC	ENSG00000123552				141	0	0	106	24	18.4615
SLC26A3	0	genome.wustl.edu	37	7	107427311	107427311	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	107427311	107427311	T	-	DEL	SLC26A3	ENST00000340010	human	ensembl	74_37	-1	known	frame_shift_del	c.932	p.N311fs	0.000	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A3	HGNC	ENSG00000091138				238	0	0	173	15	7.97872
NRCAM	0	genome.wustl.edu	37	7	107816975	107816976	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	107816975	107816976	-	T	INS	NRCAM	ENST00000379028	human	ensembl	74_37	-1	known	frame_shift_ins	c.3051_3050	p.N1017fs	1.000:1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NRCAM	HGNC	ENSG00000091129				195	0	0	143	30	17.341
TMEM168	0	genome.wustl.edu	37	7	112407336	112407336	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	112407336	112407336	A	-	DEL	TMEM168	ENST00000312814	human	ensembl	74_37	-1	known	frame_shift_del	c.2010	p.F670fs	1.000	NULL	superfamily_ConA-like_lec_gl_sf	-	no_errors	TMEM168	HGNC	ENSG00000146802				164	0	0	126	21	14.2857
SND1	0	genome.wustl.edu	37	7	127732228	127732229	+	RNA	DEL	CA	CA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	127732228	127732229	CA	-	DEL	SND1	ENST00000485871	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.991	-	-	-	no_errors	SND1	HGNC	ENSG00000197157				24	0	0	21	3	12.5
UBN2	0	genome.wustl.edu	37	7	138958066	138958066	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	138958066	138958066	A	-	DEL	UBN2	ENST00000473989	human	ensembl	74_37	+1	known	frame_shift_del	c.1739	p.N582fs	1.000	NULL	NULL	-	no_errors	UBN2	HGNC	ENSG00000157741				111	0	0	102	8	7.27273
BRAF	0	genome.wustl.edu	37	7	140482926	140482927	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	140482926	140482927	-	G	INS	BRAF	ENST00000288602	human	ensembl	74_37	-1	known	frame_shift_ins	c.1209_1208	p.A404fs	1.000:1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	BRAF	HGNC	ENSG00000157764				102	0	0	94	7	6.93069
MGAM	0	genome.wustl.edu	37	7	141631635	141631635	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	141631635	141631635	A	-	DEL	MGAM	ENST00000497554	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	MGAM	HGNC	ENSG00000257335				110	1	0.900901	70	30	30
ZNF777	0	genome.wustl.edu	37	7	149129965	149129966	+	In_Frame_Ins	INS	-	-	TCC			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	149129965	149129966	-	TCC	INS	ZNF777	ENST00000247930	human	ensembl	74_37	-1	known	in_frame_ins	c.1398_1397	p.466in_frame_insE	0.025:0.090	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453				23	0	0	20	4	16.6667
ZNF777	0	genome.wustl.edu	37	7	149152696	149152696	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	149152696	149152696	G	-	DEL	ZNF777	ENST00000247930	human	ensembl	74_37	-1	known	frame_shift_del	c.418	p.L140fs	0.261	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453				263	0	0	234	39	14.2857
NME8	0	genome.wustl.edu	37	7	37903996	37903997	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	37903996	37903997	-	A	INS	NME8	ENST00000199447	human	ensembl	74_37	+1	known	frame_shift_ins	c.501_502	p.V169fs	0.000:0.000	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase	pfam_Nucleoside_diP_kinase,pfam_Thioredoxin_domain,superfamily_Nucleoside_diP_kinase,superfamily_Thioredoxin-like_fold,smart_Nucleoside_diP_kinase	-	no_errors	NME8	HGNC	ENSG00000086288				62	0	0	35	5	12.5
C7orf57	0	genome.wustl.edu	37	7	48086205	48086205	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	48086205	48086205	A	-	DEL	C7orf57	ENST00000348904	human	ensembl	74_37	+1	known	frame_shift_del	c.499	p.K169fs	1.000	NULL	NULL	-	no_errors	C7orf57	HGNC	ENSG00000164746				19	0	0	15	5	25
ZNF716	0	genome.wustl.edu	37	7	57528542	57528542	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	57528542	57528542	A	-	DEL	ZNF716	ENST00000420713	human	ensembl	74_37	+1	known	frame_shift_del	c.375	p.K127fs	0.128	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF716	HGNC	ENSG00000182111				78	0	0	47	12	20.339
ZNF680	0	genome.wustl.edu	37	7	64004763	64004765	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	64004763	64004765	CTC	-	DEL	ZNF680	ENST00000309683	human	ensembl	74_37	-1	known	in_frame_del	c.78_76	p.E26in_frame_del	0.273:0.269:0.259	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF680	HGNC	ENSG00000173041				290	0	0	210	35	14.2857
ABCB4	0	genome.wustl.edu	37	7	87074281	87074282	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	87074281	87074282	-	A	INS	ABCB4	ENST00000265723	human	ensembl	74_37	-1	known	frame_shift_ins	c.1016_1015	p.S339fs	1.000:1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB4	HGNC	ENSG00000005471				56	0	0	50	4	7.40741
C7orf63	0	genome.wustl.edu	37	7	89929188	89929188	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	89929188	89929188	A	-	DEL	C7orf63	ENST00000389297	human	ensembl	74_37	+1	known	frame_shift_del	c.1865	p.K624fs	0.996	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	C7orf63	HGNC	ENSG00000105792				63	0	0	48	13	21.3115
CYP51A1	0	genome.wustl.edu	37	7	91752494	91752494	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	91752494	91752494	T	-	DEL	CYP51A1	ENST00000003100	human	ensembl	74_37	-1	known	frame_shift_del	c.1026	p.K342fs	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP51A1	HGNC	ENSG00000001630				304	0	0	218	45	17.1103
PEX1	0	genome.wustl.edu	37	7	92147069	92147069	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	92147069	92147069	A	-	DEL	PEX1	ENST00000248633	human	ensembl	74_37	-1	known	frame_shift_del	c.760	p.S254fs	1.000	NULL	pfam_ATPase_AAA_core,pfam_Peroxisome_synth_fac_1_a/b,pfam_PEX-1N,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase	-	no_errors	PEX1	HGNC	ENSG00000127980				165	0	0	127	16	11.1888
SAMD9L	0	genome.wustl.edu	37	7	92761060	92761061	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	92761060	92761061	-	T	INS	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	frame_shift_ins	c.4225_4224	p.Q1408fs	0.904:0.665	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409				494	0	0	411	69	14.375
PVRIG	0	genome.wustl.edu	37	7	99817848	99817848	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	7	99817848	99817848	G	-	DEL	PVRIG	ENST00000317271	human	ensembl	74_37	+1	known	frame_shift_del	c.230	p.G79fs	0.520	NULL	NULL	-	no_errors	PVRIG	HGNC	ENSG00000213413				8	0	0	9	3	25
RGS22	0	genome.wustl.edu	37	8	100990178	100990178	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	100990178	100990178	T	-	DEL	RGS22	ENST00000360863	human	ensembl	74_37	-1	known	frame_shift_del	c.3486	p.K1162fs	0.010	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	RGS22	HGNC	ENSG00000132554				155	0	0	122	22	15.2778
RGS22	0	genome.wustl.edu	37	8	100990287	100990288	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	100990287	100990288	-	C	INS	RGS22	ENST00000360863	human	ensembl	74_37	-1	known	frame_shift_ins	c.3377_3376	p.V1126fs	1.000:1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	RGS22	HGNC	ENSG00000132554				91	0	0	91	19	17.2727
NCALD	0	genome.wustl.edu	37	8	102701625	102701626	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	102701625	102701626	GA	-	DEL	NCALD	ENST00000311028	human	ensembl	74_37	-1	known	frame_shift_del	c.494_493	p.S165fs	1.000:1.000	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	NCALD	HGNC	ENSG00000104490				20	0	0	20	4	16.6667
UBR5	0	genome.wustl.edu	37	8	103289349	103289349	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	103289349	103289349	T	-	DEL	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	frame_shift_del	c.6360	p.E2121fs	0.987	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				284	1	0.350877	249	38	13.2404
SOX7	0	genome.wustl.edu	37	8	10583646	10583646	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	10583646	10583646	G	-	DEL	SOX7	ENST00000553390	human	ensembl	74_37	-1	known	frame_shift_del	c.925	p.L309fs	0.665	pfam_Sox_C_TAD	pfam_Sox_C_TAD,pfam_G_patch_dom,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_HMG_box_dom	-	no_errors	SOX7	HGNC	ENSG00000171056				54	0	0	58	6	9.375
SLA	0	genome.wustl.edu	37	8	134063100	134063100	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	134063100	134063100	G	-	DEL	SLA	ENST00000427060	human	ensembl	74_37	-1	known	frame_shift_del	c.242	p.P81fs	0.999	superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pfscan_SH2,pfscan_SH3_domain,prints_SH2	-	no_errors	SLA	HGNC	ENSG00000155926				110	0	0	128	9	6.56934
COL22A1	0	genome.wustl.edu	37	8	139609210	139609210	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	139609210	139609210	C	-	DEL	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	frame_shift_del	c.4369	p.E1457fs	0.999	pfam_Collagen	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436				259	0	0	280	15	5.08475
MAPK15	0	genome.wustl.edu	37	8	144804319	144804319	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	144804319	144804319	G	-	DEL	MAPK15	ENST00000338033	human	ensembl	74_37	+1	known	frame_shift_del	c.1533	p.G513fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPK15	HGNC	ENSG00000181085				141	0	0	163	24	12.8342
CYC1	0	genome.wustl.edu	37	8	145150875	145150876	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	145150875	145150876	-	C	INS	CYC1	ENST00000318911	human	ensembl	74_37	+1	known	frame_shift_ins	c.269_270	p.S93fs	1.000:1.000	superfamily_Cyt_c-like_dom	pfam_Cyt_c1,superfamily_Cyt_c-like_dom,superfamily_Cyt_c1_TM_anchor_C,prints_Cyt_c1	-	no_errors	CYC1	HGNC	ENSG00000179091				86	0	0	98	9	8.41121
CYC1	0	genome.wustl.edu	37	8	145150906	145150908	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	145150906	145150908	CCT	-	DEL	CYC1	ENST00000318911	human	ensembl	74_37	+1	known	in_frame_del	c.300_302	p.L102in_frame_del	0.999:0.998:0.999	pfam_Cyt_c1,superfamily_Cyt_c-like_dom,prints_Cyt_c1	pfam_Cyt_c1,superfamily_Cyt_c-like_dom,superfamily_Cyt_c1_TM_anchor_C,prints_Cyt_c1	-	no_errors	CYC1	HGNC	ENSG00000179091				104	0	0	108	16	12.9032
ARHGAP39	0	genome.wustl.edu	37	8	145773483	145773483	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	145773483	145773483	G	-	DEL	ARHGAP39	ENST00000377307	human	ensembl	74_37	-1	known	frame_shift_del	c.987	p.M330fs	0.997	NULL	pfam_RhoGAP_dom,pfam_MyTH4_dom,superfamily_Rho_GTPase_activation_prot,superfamily_WW_dom,smart_WW_dom,smart_MyTH4_dom,smart_RhoGAP_dom,pfscan_MyTH4_dom,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP39	HGNC	ENSG00000147799				46	0	0	87	5	5.43478
TNFRSF10D	0	genome.wustl.edu	37	8	23003346	23003347	+	Frame_Shift_Ins	INS	-	-	C			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	23003346	23003347	-	C	INS	TNFRSF10D	ENST00000312584	human	ensembl	74_37	-1	known	frame_shift_ins	c.571_570	p.K190fs	0.019:0.026	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_10	-	no_errors	TNFRSF10D	HGNC	ENSG00000173530				166	1	0.598802	161	29	15.2632
ADAMDEC1	0	genome.wustl.edu	37	8	24257686	24257686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	24257686	24257686	A	-	DEL	ADAMDEC1	ENST00000256412	human	ensembl	74_37	+1	known	frame_shift_del	c.1015	p.K341fs	0.044	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAMDEC1	HGNC	ENSG00000134028				55	0	0	41	10	19.6078
NEFM	0	genome.wustl.edu	37	8	24773137	24773137	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	24773137	24773137	A	-	DEL	NEFM	ENST00000221166	human	ensembl	74_37	+1	known	frame_shift_del	c.1100	p.N368fs	1.000	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	pfam_IF,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	NEFM	HGNC	ENSG00000104722				156	0	0	169	27	13.7755
CDCA2	0	genome.wustl.edu	37	8	25364716	25364716	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	25364716	25364716	A	-	DEL	CDCA2	ENST00000330560	human	ensembl	74_37	+1	known	frame_shift_del	c.2534	p.N847fs	0.018	NULL	NULL	-	no_errors	CDCA2	HGNC	ENSG00000184661				167	0	0	128	32	20
SDAD1P1	0	genome.wustl.edu	37	8	26238130	26238130	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	26238130	26238130	T	-	DEL	SDAD1P1	ENST00000519902	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SDAD1P1	HGNC	ENSG00000228451				121	0	0	130	7	5.10949
ESCO2	0	genome.wustl.edu	37	8	27633949	27633949	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	27633949	27633949	A	-	DEL	ESCO2	ENST00000305188	human	ensembl	74_37	+1	known	frame_shift_del	c.124	p.N43fs	0.325	NULL	NULL	-	no_errors	ESCO2	HGNC	ENSG00000171320				57	0	0	56	12	17.6471
NRG1	0	genome.wustl.edu	37	8	32607050	32607050	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	32607050	32607050	T	-	DEL	NRG1	ENST00000523681	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NRG1	HGNC	ENSG00000157168				158	0	0	167	31	15.6566
PRKDC	0	genome.wustl.edu	37	8	48701555	48701555	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	48701555	48701555	T	-	DEL	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	frame_shift_del	c.10811	p.N3604fs	0.000	NULL	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				125	0	0	104	20	16.129
SNAI2	0	genome.wustl.edu	37	8	49831439	49831439	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	49831439	49831439	T	-	DEL	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	frame_shift_del	c.734	p.N245fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549				266	0	0	194	30	13.3929
MYBL1	0	genome.wustl.edu	37	8	67488453	67488453	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	67488453	67488453	T	-	DEL	MYBL1	ENST00000522677	human	ensembl	74_37	-1	known	frame_shift_del	c.1259	p.N420fs	0.992	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697				358	2	0.555556	378	60	13.6986
SULF1	0	genome.wustl.edu	37	8	70514026	70514026	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	70514026	70514026	T	-	DEL	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	frame_shift_del	c.1023	p.F343fs	0.786	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573				596	1	0.167504	539	87	13.8978
KCNB2	0	genome.wustl.edu	37	8	73480397	73480397	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	73480397	73480397	A	-	DEL	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	frame_shift_del	c.428	p.E146fs	1.000	prints_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				161	0	0	154	43	21.8274
STAU2	0	genome.wustl.edu	37	8	74507471	74507471	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	74507471	74507471	T	-	DEL	STAU2	ENST00000524300	human	ensembl	74_37	-1	known	frame_shift_del	c.1091	p.N364fs	1.000	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	STAU2	HGNC	ENSG00000040341				200	0	0	168	26	13.4021
LY96	0	genome.wustl.edu	37	8	74903693	74903693	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	74903693	74903693	T	-	DEL	LY96	ENST00000284818	human	ensembl	74_37	+1	known	frame_shift_del	c.16	p.S8fs	0.009	NULL	pfam_ML_dom,superfamily_Ig_E-set,smart_ML_dom	-	no_errors	LY96	HGNC	ENSG00000154589				268	0	0	229	38	14.2322
ZNF705B	0	genome.wustl.edu	37	8	7806751	7806751	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	7806751	7806751	A	-	DEL	ZNF705B	ENST00000400120	human	ensembl	74_37	+1	known	frame_shift_del	c.113	p.N39fs	0.972	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF705B	HGNC	ENSG00000215356				319	0	0	404	23	5.38642
LRRCC1	0	genome.wustl.edu	37	8	86047209	86047209	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	86047209	86047209	A	-	DEL	LRRCC1	ENST00000360375	human	ensembl	74_37	+1	known	frame_shift_del	c.2096	p.T701fs	1.000	NULL	pfam_Leu-rich_rpt,superfamily_Prefoldin	-	no_errors	LRRCC1	HGNC	ENSG00000133739				236	0	0	177	27	13.2353
KIAA1429	0	genome.wustl.edu	37	8	95531562	95531563	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	95531562	95531563	-	A	INS	KIAA1429	ENST00000297591	human	ensembl	74_37	-1	known	frame_shift_ins	c.2164_2163	p.M721fs	1.000:1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944				152	0	0	149	18	10.7784
ESRP1	0	genome.wustl.edu	37	8	95686611	95686611	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	95686611	95686611	A	-	DEL	ESRP1	ENST00000433389	human	ensembl	74_37	+1	known	frame_shift_del	c.1528	p.N512fs	1.000	smart_RRM_dom	superfamily_RNaseH-like_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ESRP1	HGNC	ENSG00000104413				130	0	0	95	23	19.4915
SNORA72	0	genome.wustl.edu	37	8	99054837	99054839	+	RNA	DEL	AAA	AAA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	8	99054837	99054839	AAA	-	DEL	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049:0.047:0.041	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970				86	0	0	118	19	13.8686
XPA	0	genome.wustl.edu	37	9	100437634	100437634	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	100437634	100437634	T	-	DEL	XPA	ENST00000485042	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	XPA	HGNC	ENSG00000136936				20	0	0	9	7	43.75
BAAT	0	genome.wustl.edu	37	9	104133686	104133686	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	104133686	104133686	T	-	DEL	BAAT	ENST00000259407	human	ensembl	74_37	-1	known	frame_shift_del	c.1	p.M1fs	0.425	pirsf_Acyl-CoA_thioEstase_long-chain	pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain	-	no_errors	BAAT	HGNC	ENSG00000136881				93	0	0	74	15	16.8539
CYLC2	0	genome.wustl.edu	37	9	105767324	105767324	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	105767324	105767324	A	-	DEL	CYLC2	ENST00000374798	human	ensembl	74_37	+1	known	frame_shift_del	c.411	p.D140fs	0.000	NULL	NULL	-	no_errors	CYLC2	HGNC	ENSG00000155833				56	0	0	41	7	14.5833
SMC2	0	genome.wustl.edu	37	9	106862450	106862450	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	106862450	106862450	A	-	DEL	SMC2	ENST00000286398	human	ensembl	74_37	+1	known	frame_shift_del	c.557	p.K188fs	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	-	no_errors	SMC2	HGNC	ENSG00000136824				48	0	0	44	11	20
KIAA0368	0	genome.wustl.edu	37	9	114125875	114125875	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	114125875	114125875	T	-	DEL	KIAA0368	ENST00000259335	human	ensembl	74_37	-1	known	frame_shift_del	c.5907	p.K1969fs	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA0368	HGNC	ENSG00000136813				102	0	0	94	18	16.0714
ASTN2	0	genome.wustl.edu	37	9	119382602	119382602	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	119382602	119382602	G	-	DEL	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	frame_shift_del	c.3193	p.L1065fs	1.000	superfamily_Fibronectin_type3	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219				146	0	0	120	23	16.0839
C9orf78	0	genome.wustl.edu	37	9	132595850	132595850	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	132595850	132595850	T	-	DEL	C9orf78	ENST00000461762	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819				109	0	0	70	23	24.7312
GTF3C5	0	genome.wustl.edu	37	9	135919245	135919245	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	135919245	135919245	C	-	DEL	GTF3C5	ENST00000372108	human	ensembl	74_37	+1	known	frame_shift_del	c.504	p.P170fs	1.000	pfam_TF_IIIC_su-5	pfam_TF_IIIC_su-5	-	no_errors	GTF3C5	HGNC	ENSG00000148308				156	0	0	155	20	11.4286
C9orf142	0	genome.wustl.edu	37	9	139887571	139887572	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	139887571	139887572	-	G	INS	C9orf142	ENST00000371620	human	ensembl	74_37	+1	known	frame_shift_ins	c.297_298	p.P101fs	0.000:0.003	NULL	NULL	-	no_errors	C9orf142	HGNC	ENSG00000148362				101	0	0	70	14	16.6667
PSIP1	0	genome.wustl.edu	37	9	15472612	15472613	+	RNA	DEL	AA	AA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	15472612	15472613	AA	-	DEL	PSIP1	ENST00000495873	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	PSIP1	HGNC	ENSG00000164985				150	0	0	74	63	45.9854
FOCAD	0	genome.wustl.edu	37	9	20912931	20912931	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	20912931	20912931	A	-	DEL	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	frame_shift_del	c.2785	p.S931fs	1.000	superfamily_ARM-type_fold	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				66	0	0	54	8	12.9032
KIAA1045	0	genome.wustl.edu	37	9	34977144	34977144	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	34977144	34977144	G	-	DEL	KIAA1045	ENST00000242315	human	ensembl	74_37	+1	known	frame_shift_del	c.914	p.G306fs	0.000	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	KIAA1045	HGNC	ENSG00000122733				102	0	0	94	9	8.73786
C9orf131	0	genome.wustl.edu	37	9	35043650	35043650	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	35043650	35043650	C	-	DEL	C9orf131	ENST00000312292	human	ensembl	74_37	+1	known	frame_shift_del	c.1024	p.C344fs	0.000	NULL	NULL	-	no_errors	C9orf131	HGNC	ENSG00000174038				435	0	0	400	51	11.3082
RUSC2	0	genome.wustl.edu	37	9	35547974	35547974	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	35547974	35547974	C	-	DEL	RUSC2	ENST00000361226	human	ensembl	74_37	+1	known	frame_shift_del	c.1456	p.N488fs	1.000	NULL	pfam_Run,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC2	HGNC	ENSG00000198853				151	0	0	128	13	9.21986
MELK	0	genome.wustl.edu	37	9	36630152	36630152	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	36630152	36630152	T	-	DEL	MELK	ENST00000480021	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MELK	HGNC	ENSG00000165304				102	0	0	84	15	15.1515
SPATA6L	0	genome.wustl.edu	37	9	4663310	4663310	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	4663310	4663310	T	-	DEL	SPATA6L	ENST00000497383	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPATA6L	HGNC	ENSG00000106686				143	0	0	136	24	15
JAK2	0	genome.wustl.edu	37	9	5126304	5126304	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	5126304	5126304	A	-	DEL	JAK2	ENST00000487310	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	JAK2	HGNC	ENSG00000096968				70	0	0	59	14	19.1781
ERMP1	0	genome.wustl.edu	37	9	5801292	5801292	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	5801292	5801292	T	-	DEL	ERMP1	ENST00000339450	human	ensembl	74_37	-1	known	frame_shift_del	c.1951	p.T651fs	0.994	NULL	pfam_Peptidase_M28,pfam_Peptidase_M20	-	no_errors	ERMP1	HGNC	ENSG00000099219				169	0	0	139	17	10.8974
ERMP1	0	genome.wustl.edu	37	9	5805191	5805191	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	5805191	5805191	A	-	DEL	ERMP1	ENST00000339450	human	ensembl	74_37	-1	known	frame_shift_del	c.1750	p.Y584fs	0.999	NULL	pfam_Peptidase_M28,pfam_Peptidase_M20	-	no_errors	ERMP1	HGNC	ENSG00000099219				57	0	0	52	11	17.4603
KIAA2026	0	genome.wustl.edu	37	9	5968487	5968487	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	5968487	5968487	T	-	DEL	KIAA2026	ENST00000399933	human	ensembl	74_37	-1	novel	frame_shift_del	c.1744	p.T582fs	0.800	NULL	superfamily_Bromodomain	-	no_errors	KIAA2026	HGNC	ENSG00000183354				209	0	0	164	10	5.74713
VPS13A	0	genome.wustl.edu	37	9	79836219	79836219	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	79836219	79836219	A	-	DEL	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	frame_shift_del	c.1108	p.K372fs	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				195	0	0	155	22	12.4294
VPS13A	0	genome.wustl.edu	37	9	79984308	79984308	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	79984308	79984308	T	-	DEL	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	frame_shift_del	c.8647	p.Y2885fs	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				231	0	0	191	25	11.5741
PTPRD	0	genome.wustl.edu	37	9	8518185	8518185	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	8518185	8518185	C	-	DEL	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	frame_shift_del	c.1206	p.P403fs	0.455	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707				258	0	0	205	39	15.9836
UBQLN1	0	genome.wustl.edu	37	9	86284162	86284164	+	In_Frame_Del	DEL	ACA	ACA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	ACA	ACA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	86284162	86284164	ACA	-	DEL	UBQLN1	ENST00000376395	human	ensembl	74_37	-1	known	in_frame_del	c.1186_1184	p.L395in_frame_del	1.000:1.000:1.000	superfamily_XPC-bd,smart_STI1_HS-bd	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN1	HGNC	ENSG00000135018				124	0	0	95	20	17.3913
ENSG00000229454	0	genome.wustl.edu	37	9	88370966	88370966	+	RNA	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	88370966	88370966	T	-	DEL	ENSG00000229454	ENST00000447148	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-202I11.2	Clone_based_vega_gene	ENSG00000229454				44	0	0	28	10	26.3158
C9orf89	0	genome.wustl.edu	37	9	95872833	95872833	+	RNA	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	95872833	95872833	C	-	DEL	C9orf89	ENST00000488630	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C9orf89	HGNC	ENSG00000165233				96	0	0	83	15	15.3061
PHF2	0	genome.wustl.edu	37	9	96422612	96422612	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	9	96422612	96422612	A	-	DEL	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	frame_shift_del	c.1468	p.K492fs	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				32	0	0	30	6	16.6667
ZMAT1	0	genome.wustl.edu	37	X	101138347	101138347	+	RNA	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	101138347	101138347	A	-	DEL	ZMAT1	ENST00000494068	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZMAT1	HGNC	ENSG00000166432				17	0	0	8	3	27.2727
ZBTB33	0	genome.wustl.edu	37	X	119387857	119387857	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	119387857	119387857	T	-	DEL	ZBTB33	ENST00000326624	human	ensembl	74_37	+1	known	frame_shift_del	c.587	p.C198fs	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB33	HGNC	ENSG00000177485				150	0	0	101	9	8.18182
ZBTB33	0	genome.wustl.edu	37	X	119389224	119389225	+	Frame_Shift_Ins	INS	-	-	T			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	119389224	119389225	-	T	INS	ZBTB33	ENST00000326624	human	ensembl	74_37	+1	known	frame_shift_ins	c.1954_1955	p.K654fs	0.979:0.986	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB33	HGNC	ENSG00000177485				258	0	0	150	28	15.7303
DDX26B	0	genome.wustl.edu	37	X	134680317	134680317	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	134680317	134680317	T	-	DEL	DDX26B	ENST00000370752	human	ensembl	74_37	+1	known	frame_shift_del	c.352	p.L120fs	1.000	pfscan_VWF_A	pfscan_VWF_A	-	no_errors	DDX26B	HGNC	ENSG00000165359				150	0	0	66	20	23.2558
SPANXN2	0	genome.wustl.edu	37	X	142803692	142803692	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	142803692	142803692	T	-	DEL	SPANXN2	ENST00000370498	human	ensembl	74_37	-1	known	frame_shift_del	c.71	p.N24fs	0.000	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXN2	HGNC	ENSG00000203924				516	2	0.3861	270	92	25.4144
AFF2	0	genome.wustl.edu	37	X	148037970	148037970	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	148037970	148037970	A	-	DEL	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	frame_shift_del	c.2395	p.N800fs	0.995	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				219	0	0	141	43	23.3696
ACE2	0	genome.wustl.edu	37	X	15619104	15619105	+	RNA	DEL	TC	TC	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	15619104	15619105	TC	-	DEL	ACE2	ENST00000484756	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.697	-	-	-	no_errors	ACE2	HGNC	ENSG00000130234				34	0	0	14	8	36.3636
SCARNA23	0	genome.wustl.edu	37	X	24762687	24762688	+	RNA	DEL	TA	TA	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	24762687	24762688	TA	-	DEL	SCARNA23	ENST00000516060	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	SCARNA23	HGNC	ENSG00000251869				325	1	0.306748	156	33	17.4603
DMD	0	genome.wustl.edu	37	X	32591746	32591746	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	32591746	32591746	A	-	DEL	DMD	ENST00000357033	human	ensembl	74_37	-1	known	frame_shift_del	c.1713	p.F571fs	1.000	smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				233	0	0	138	18	11.5385
RPGR	0	genome.wustl.edu	37	X	38144857	38144857	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	38144857	38144857	T	-	DEL	RPGR	ENST00000378505	human	ensembl	74_37	-1	known	frame_shift_del	c.3395	p.N1132fs	0.069	NULL	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313				512	0	0	290	85	22.6667
GPR82	0	genome.wustl.edu	37	X	41587149	41587149	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	41587149	41587149	A	-	DEL	GPR82	ENST00000302548	human	ensembl	74_37	+1	known	frame_shift_del	c.870	p.N292fs	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR82	HGNC	ENSG00000171657				186	0	0	100	29	22.4806
EFHC2	0	genome.wustl.edu	37	X	44094660	44094660	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	44094660	44094660	A	-	DEL	EFHC2	ENST00000420999	human	ensembl	74_37	-1	known	frame_shift_del	c.1314	p.F438fs	0.996	smart_Uncharacterised_DM10	pfam_DUF1126,smart_Uncharacterised_DM10,pfscan_EF_hand_dom	-	no_errors	EFHC2	HGNC	ENSG00000183690				38	0	0	14	4	22.2222
SSX3	0	genome.wustl.edu	37	X	48209462	48209463	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	48209462	48209463	-	G	INS	SSX3	ENST00000298396	human	ensembl	74_37	-1	known	frame_shift_ins	c.426_425	p.P145fs	0.000:0.000	NULL	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX3	HGNC	ENSG00000165584				564	0	0	401	25	5.86854
CACNA1F	0	genome.wustl.edu	37	X	49061829	49061830	+	Splice_Site	INS	-	-	G			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	49061829	49061830	-	G	INS	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	splice_site_ins	c.5704-3_5704-2	e48-2	0.994:0.042	-	-	-	no_errors	CACNA1F	HGNC	ENSG00000102001				21	0	0	13	5	27.7778
GSPT2	0	genome.wustl.edu	37	X	51487864	51487865	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	51487864	51487865	-	A	INS	GSPT2	ENST00000340438	human	ensembl	74_37	+1	known	frame_shift_ins	c.1142_1143	p.D384fs	1.000:0.997	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,pfam_Ataxin-2_C,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom	-	no_errors	GSPT2	HGNC	ENSG00000189369				101	0	0	71	19	21.1111
ARHGEF9	0	genome.wustl.edu	37	X	62974233	62974233	+	RNA	DEL	C	C	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	62974233	62974233	C	-	DEL	ARHGEF9	ENST00000495564	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.963	-	-	-	no_errors	ARHGEF9	HGNC	ENSG00000131089				104	0	0	43	18	29.5082
IL2RG	0	genome.wustl.edu	37	X	70327614	70327614	+	Frame_Shift_Del	DEL	G	G	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	70327614	70327614	G	-	DEL	IL2RG	ENST00000374202	human	ensembl	74_37	-1	known	frame_shift_del	c.1082	p.P361fs	0.874	NULL	pfam_IL-6_rcpt_alpha-bd,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL2RG	HGNC	ENSG00000147168				42	0	0	32	10	23.8095
HDX	0	genome.wustl.edu	37	X	83724297	83724297	+	Frame_Shift_Del	DEL	T	T	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	83724297	83724297	T	-	DEL	HDX	ENST00000297977	human	ensembl	74_37	-1	known	frame_shift_del	c.434	p.N145fs	0.993	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HDX	HGNC	ENSG00000165259				431	0	0	268	68	20.2381
ZNF711	0	genome.wustl.edu	37	X	84526621	84526621	+	Frame_Shift_Del	DEL	A	A	-			TCGA-CG-5728-01A-11D-1600-08	TCGA-CG-5728-11A-01D-1600-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	49bb40de-9ebf-441a-b9e1-0916ed9db4b0	173dbb7e-7f46-4581-aaf6-7f5b7f734788	X	84526621	84526621	A	-	DEL	ZNF711	ENST00000395402	human	ensembl	74_37	+1	known	frame_shift_del	c.2097	p.K701fs	0.506	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Transcrp_activ_Zfx/Zfy-dom,pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF711	HGNC	ENSG00000147180				283	0	0	158	36	18.5567
