Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
PRAMEF11	0	genome.wustl.edu	37	1	12887623	12887623	+	Missense_Mutation	SNP	T	T	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	12887623	12887623	T	G	SNP	PRAMEF11	ENST00000535591	human	ensembl	74_37	-1	known	missense	c.234	p.E78D	0.134	NULL	NULL	-	no_errors	PRAMEF11	HGNC	ENSG00000204513				669	0	0	476	26	5.17928
RRNAD1	0	genome.wustl.edu	37	1	156706559	156706559	+	RNA	SNP	G	G	C			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	156706559	156706559	G	C	SNP	RRNAD1	ENST00000481920	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	RRNAD1	HGNC	ENSG00000143303				22	0	0	32	4	11.1111
OLFML2B	0	genome.wustl.edu	37	1	161967627	161967627	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	161967627	161967627	G	A	SNP	OLFML2B	ENST00000294794	human	ensembl	74_37	-1	known	missense	c.1462	p.R488W	1.000	NULL	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745				399	0	0	238	15	5.92885
SELL	0	genome.wustl.edu	37	1	169677923	169677923	+	Missense_Mutation	SNP	G	G	C			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	169677923	169677923	G	C	SNP	SELL	ENST00000236147	human	ensembl	74_37	-1	known	missense	c.146	p.T49S	0.000	smart_C-type_lectin,pirsf_L-selectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_C-type_lectin,smart_EG-like_dom,smart_Sushi_SCR_CCP,pirsf_L-selectin,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELL	HGNC	ENSG00000188404				12	0	0	7	5	41.6667
TNR	0	genome.wustl.edu	37	1	175292512	175292512	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	175292512	175292512	C	T	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	missense	c.4058	p.R1353Q	1.000	NULL	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147				154	0	0	101	7	6.48148
LRRN2	0	genome.wustl.edu	37	1	204588700	204588700	+	Missense_Mutation	SNP	C	C	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	204588700	204588700	C	G	SNP	LRRN2	ENST00000367175	human	ensembl	74_37	-1	known	missense	c.421	p.A141P	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRN2	HGNC	ENSG00000170382				262	0	0	131	40	23.3918
HSPG2	0	genome.wustl.edu	37	1	22199882	22199882	+	Missense_Mutation	SNP	C	C	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	22199882	22199882	C	G	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.3779	p.G1260A	1.000	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				324	0	0	113	69	37.9121
HMGN2	0	genome.wustl.edu	37	1	26801762	26801762	+	RNA	SNP	G	G	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	26801762	26801762	G	T	SNP	HMGN2	ENST00000460563	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HMGN2	HGNC	ENSG00000198830				16	0	0	10	7	41.1765
SLC1A7	0	genome.wustl.edu	37	1	53558323	53558323	+	Silent	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	53558323	53558323	G	A	SNP	SLC1A7	ENST00000371494	human	ensembl	74_37	-1	known	silent	c.934	p.L312	1.000	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A7	HGNC	ENSG00000162383				140	1	0.70922	79	7	8.13953
CNN3	0	genome.wustl.edu	37	1	95367785	95367785	+	Silent	SNP	A	A	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	95367785	95367785	A	G	SNP	CNN3	ENST00000370206	human	ensembl	74_37	-1	known	silent	c.276	p.A92	0.396	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,prints_SM22_calponin	pfam_Calponin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,pfscan_Calponin_repeat,prints_SM22_calponin,prints_Calponin	-	no_errors	CNN3	HGNC	ENSG00000117519				53	0	0	38	7	15.5556
ITGA8	0	genome.wustl.edu	37	10	15634288	15634288	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	10	15634288	15634288	G	A	SNP	ITGA8	ENST00000378076	human	ensembl	74_37	-1	known	nonsense	c.2227	p.R743*	1.000	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA8	HGNC	ENSG00000077943				51	0	0	34	4	10.5263
MICALCL	0	genome.wustl.edu	37	11	12315180	12315180	+	Missense_Mutation	SNP	C	C	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	11	12315180	12315180	C	G	SNP	MICALCL	ENST00000256186	human	ensembl	74_37	+1	known	missense	c.202	p.R68G	0.003	NULL	pfam_DUF3585,smart_ProQ/FinO	-	no_errors	MICALCL	HGNC	ENSG00000133808				347	1	0.287356	242	25	9.3633
SLC17A8	0	genome.wustl.edu	37	12	100811871	100811871	+	Silent	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	12	100811871	100811871	C	T	SNP	SLC17A8	ENST00000323346	human	ensembl	74_37	+1	known	silent	c.1362	p.N454	0.473	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A8	HGNC	ENSG00000179520				149	0	0	114	7	5.78512
KRT75	0	genome.wustl.edu	37	12	52822136	52822136	+	Missense_Mutation	SNP	C	C	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	12	52822136	52822136	C	G	SNP	KRT75	ENST00000252245	human	ensembl	74_37	-1	known	missense	c.1286	p.R429P	0.997	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT75	HGNC	ENSG00000170454				109	1	0.909091	31	41	56.9444
NRXN3	0	genome.wustl.edu	37	14	80271525	80271525	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	14	80271525	80271525	C	T	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.4052	p.P1351L	0.675	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				154	1	0.645161	104	9	7.9646
ATP8B4	0	genome.wustl.edu	37	15	50223420	50223420	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	15	50223420	50223420	C	T	SNP	ATP8B4	ENST00000284509	human	ensembl	74_37	-1	known	missense	c.1538	p.R513Q	1.000	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B4	HGNC	ENSG00000104043				94	0	0	81	5	5.81395
IL16	0	genome.wustl.edu	37	15	81589340	81589340	+	Silent	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	15	81589340	81589340	C	T	SNP	IL16	ENST00000302987	human	ensembl	74_37	+1	known	silent	c.1974	p.A658	0.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,prints_IL-16	-	no_errors	IL16	HGNC	ENSG00000172349				67	0	0	41	5	10.8696
CNOT1	0	genome.wustl.edu	37	16	58619350	58619350	+	Missense_Mutation	SNP	T	T	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	16	58619350	58619350	T	G	SNP	CNOT1	ENST00000317147	human	ensembl	74_37	-1	known	missense	c.698	p.D233A	1.000	NULL	pfam_CCR4-Not_Not1_C,superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107				147	0	0	79	8	9.1954
CDH1	0	genome.wustl.edu	37	16	68842595	68842595	+	Splice_Site	SNP	G	G	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	16	68842595	68842595	G	T	SNP	CDH1	ENST00000261769	human	ensembl	74_37	+1	known	splice_site	c.532-1	e5-1	1.000	-	-	-	no_errors	CDH1	HGNC	ENSG00000039068				57	0	0	34	7	17.0732
MTSS1L	0	genome.wustl.edu	37	16	70698201	70698201	+	Silent	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	16	70698201	70698201	C	A	SNP	MTSS1L	ENST00000338779	human	ensembl	74_37	-1	known	silent	c.1623	p.G541	0.988	NULL	pfam_IRSp53/MIM_homology_IMD	-	no_errors	MTSS1L	HGNC	ENSG00000132613				64	0	0	11	5	31.25
SPPL2C	0	genome.wustl.edu	37	17	43923555	43923555	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	17	43923555	43923555	G	A	SNP	SPPL2C	ENST00000329196	human	ensembl	74_37	+1	known	missense	c.1283	p.R428Q	0.637	pfam_Peptidase_A22B_SPP,smart_Preselin/SPP	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Preselin/SPP	-	no_errors	SPPL2C	HGNC	ENSG00000185294				104	0	0	97	8	7.61905
DLX4	0	genome.wustl.edu	37	17	48050495	48050495	+	Silent	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	17	48050495	48050495	C	A	SNP	DLX4	ENST00000240306	human	ensembl	74_37	+1	known	silent	c.342	p.A114	0.800	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	DLX4	HGNC	ENSG00000108813				122	0	0	63	11	14.8649
SPATA20	0	genome.wustl.edu	37	17	48628510	48628510	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	17	48628510	48628510	C	A	SNP	SPATA20	ENST00000006658	human	ensembl	74_37	+1	known	missense	c.1535	p.P512H	1.000	superfamily_6-hairpin_glycosidase-like	pfam_DUF255,pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like,superfamily_Thioredoxin-like_fold	-	no_errors	SPATA20	HGNC	ENSG00000006282				37	0	0	20	7	25.9259
SPATA20	0	genome.wustl.edu	37	17	48628511	48628511	+	Silent	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	17	48628511	48628511	C	A	SNP	SPATA20	ENST00000006658	human	ensembl	74_37	+1	known	silent	c.1536	p.P512	0.001	superfamily_6-hairpin_glycosidase-like	pfam_DUF255,pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like,superfamily_Thioredoxin-like_fold	-	no_errors	SPATA20	HGNC	ENSG00000006282				37	0	0	20	8	28.5714
ME2	0	genome.wustl.edu	37	18	48443718	48443718	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	18	48443718	48443718	C	T	SNP	ME2	ENST00000321341	human	ensembl	74_37	+1	known	missense	c.470	p.A157V	1.000	pfam_Malic_N,prints_Malic_OxRdtase	pfam_Malic_NAD-bd,pfam_Malic_N,smart_Malic_NAD-bd,prints_Malic_OxRdtase	-	no_errors	ME2	HGNC	ENSG00000082212				137	0	0	82	7	7.86517
VPS4B	0	genome.wustl.edu	37	18	61067862	61067862	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	18	61067862	61067862	C	A	SNP	VPS4B	ENST00000238497	human	ensembl	74_37	-1	known	missense	c.559	p.V187L	1.000	pfam_ATPase_AAA_core,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_MIT,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_MIT,smart_AAA+_ATPase	-	no_errors	VPS4B	HGNC	ENSG00000119541				67	0	0	56	5	8.19672
DOK6	0	genome.wustl.edu	37	18	67365769	67365769	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	18	67365769	67365769	C	T	SNP	DOK6	ENST00000382713	human	ensembl	74_37	+1	known	missense	c.539	p.P180L	1.000	pfam_Insln_rcpt_S1,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK6	HGNC	ENSG00000206052				60	0	0	58	5	7.93651
ATP9B	0	genome.wustl.edu	37	18	77096644	77096644	+	Missense_Mutation	SNP	G	G	C			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	18	77096644	77096644	G	C	SNP	ATP9B	ENST00000426216	human	ensembl	74_37	+1	known	missense	c.2045	p.R682P	0.832	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9B	HGNC	ENSG00000166377				45	0	0	10	12	54.5455
RDH8	0	genome.wustl.edu	37	19	10129502	10129502	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	19	10129502	10129502	C	A	SNP	RDH8	ENST00000591589	human	ensembl	74_37	+1	known	missense	c.418	p.R140S	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pirsf_17beta_DH,prints_DHB_DH	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pirsf_17beta_DH,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	RDH8	HGNC	ENSG00000080511				141	0	0	94	7	6.93069
ARMC6	0	genome.wustl.edu	37	19	19168421	19168421	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	19	19168421	19168421	G	A	SNP	ARMC6	ENST00000392336	human	ensembl	74_37	+1	known	missense	c.1490	p.G497D	0.998	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC6	HGNC	ENSG00000105676				59	0	0	38	3	7.31707
CREB3L3	0	genome.wustl.edu	37	19	4154997	4154997	+	Silent	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	19	4154997	4154997	C	T	SNP	CREB3L3	ENST00000078445	human	ensembl	74_37	+1	known	silent	c.129	p.G43	0.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	CREB3L3	HGNC	ENSG00000060566				175	0	0	88	6	6.38298
CIC	0	genome.wustl.edu	37	19	42795827	42795827	+	Missense_Mutation	SNP	G	G	C			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	19	42795827	42795827	G	C	SNP	CIC	ENST00000575354	human	ensembl	74_37	+1	known	missense	c.2816	p.G939A	0.998	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				190	0	0	67	35	34.3137
TMC4	0	genome.wustl.edu	37	19	54676754	54676754	+	Missense_Mutation	SNP	G	G	C			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	19	54676754	54676754	G	C	SNP	TMC4	ENST00000301187	human	ensembl	74_37	-1	known	missense	c.59	p.A20G	0.989	NULL	pfam_TMC	-	no_errors	TMC4	HGNC	ENSG00000167608				339	1	0.294118	145	40	21.6216
RANBP2	0	genome.wustl.edu	37	2	109399073	109399073	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	2	109399073	109399073	C	A	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.9124	p.Q3042K	1.000	pfam_Ran_bind_dom,pfscan_Ran_bind_dom	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				138	0	0	81	8	8.98876
IL1B	0	genome.wustl.edu	37	2	113590381	113590381	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	2	113590381	113590381	C	T	SNP	IL1B	ENST00000263341	human	ensembl	74_37	-1	known	nonsense	c.324	p.W108*	0.000	prints_IL-1_beta	pfam_IL-1,pfam_IL-1_propep,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1_beta,prints_IL-1_alpha/beta,prints_IL-1,prints_IL-1_fam/FGF_fam,prints_IL-1RA/IL-36	-	no_errors	IL1B	HGNC	ENSG00000125538				110	0	0	92	5	5.15464
TTN	0	genome.wustl.edu	37	2	179483430	179483430	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	2	179483430	179483430	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.39143	p.T13048M	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				89	0	0	68	4	5.55556
TTN	0	genome.wustl.edu	37	2	179582537	179582537	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	2	179582537	179582537	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.21332	p.A7111E	1.000	superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				60	0	0	39	5	11.3636
TTN	0	genome.wustl.edu	37	2	179612559	179612559	+	Silent	SNP	T	T	C			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	2	179612559	179612559	T	C	SNP	TTN	ENST00000360870	human	ensembl	74_37	-1	known	silent	c.14568	p.E4856	0.582	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				57	0	0	68	4	5.55556
FOSL2	0	genome.wustl.edu	37	2	28635103	28635103	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	2	28635103	28635103	G	A	SNP	FOSL2	ENST00000264716	human	ensembl	74_37	+1	known	missense	c.769	p.G257S	0.676	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	FOSL2	HGNC	ENSG00000075426				64	0	0	54	4	6.89655
MACROD2	0	genome.wustl.edu	37	20	14066374	14066374	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	20	14066374	14066374	G	A	SNP	MACROD2	ENST00000310348	human	ensembl	74_37	+1	known	missense	c.271	p.A91T	0.996	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	-	no_errors	MACROD2	HGNC	ENSG00000172264				68	0	0	28	3	9.67742
CD93	0	genome.wustl.edu	37	20	23065099	23065099	+	Silent	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	20	23065099	23065099	G	A	SNP	CD93	ENST00000246006	human	ensembl	74_37	-1	known	silent	c.1731	p.D577	0.252	NULL	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_MFS_dom_general_subst_transpt,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CD93	HGNC	ENSG00000125810				172	0	0	115	9	7.25806
C20orf194	0	genome.wustl.edu	37	20	3355774	3355774	+	Splice_Site	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	20	3355774	3355774	C	T	SNP	C20orf194	ENST00000252032	human	ensembl	74_37	-1	known	splice_site	c.409-1	e5-1	1.000	-	-	-	no_errors	C20orf194	HGNC	ENSG00000088854				240	0	0	149	14	8.58896
GNAS	0	genome.wustl.edu	37	20	57484421	57484421	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	20	57484421	57484421	G	A	SNP	GNAS	ENST00000354359	human	ensembl	74_37	+1	known	missense	c.605	p.R202H	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460				82	0	0	67	6	8.21918
MCM8	0	genome.wustl.edu	37	20	5948171	5948171	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	20	5948171	5948171	G	A	SNP	MCM8	ENST00000378886	human	ensembl	74_37	+1	known	missense	c.965	p.S322N	1.000	superfamily_NA-bd_OB-fold,smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM8	HGNC	ENSG00000125885				124	1	0.8	57	37	39.3617
MYH15	0	genome.wustl.edu	37	3	108159995	108159995	+	Missense_Mutation	SNP	T	T	C			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	3	108159995	108159995	T	C	SNP	MYH15	ENST00000273353	human	ensembl	74_37	-1	known	missense	c.2828	p.E943G	1.000	superfamily_Prefoldin	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821				109	0	0	103	6	5.50459
PLXNA1	0	genome.wustl.edu	37	3	126751309	126751309	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	3	126751309	126751309	G	A	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	missense	c.5311	p.A1771T	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				190	0	0	90	5	5.26316
MME	0	genome.wustl.edu	37	3	154886414	154886414	+	Silent	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	3	154886414	154886414	C	T	SNP	MME	ENST00000360490	human	ensembl	74_37	+1	known	silent	c.1914	p.H638	0.916	pfam_Peptidase_M13_C	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MME	HGNC	ENSG00000196549				149	0	0	83	9	9.78261
SNRK	0	genome.wustl.edu	37	3	43389767	43389767	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	3	43389767	43389767	G	T	SNP	SNRK	ENST00000296088	human	ensembl	74_37	+1	known	missense	c.2016	p.L672F	0.198	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	SNRK	HGNC	ENSG00000163788				145	1	0.684932	66	16	19.5122
FYCO1	0	genome.wustl.edu	37	3	46009157	46009157	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	3	46009157	46009157	C	A	SNP	FYCO1	ENST00000535325	human	ensembl	74_37	-1	known	missense	c.1669	p.A557S	0.000	NULL	pfam_Znf_FYVE,pfam_Run,superfamily_GOLD,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Znf_FYVE,pfscan_GOLD,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	FYCO1	HGNC	ENSG00000163820				122	1	0.813008	59	37	38.5417
RHOA	0	genome.wustl.edu	37	3	49405956	49405956	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	3	49405956	49405956	G	T	SNP	RHOA	ENST00000418115	human	ensembl	74_37	-1	known	missense	c.182	p.A61D	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOA	HGNC	ENSG00000067560				142	0	0	91	6	6.18557
FAM212A	0	genome.wustl.edu	37	3	49842272	49842272	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	3	49842272	49842272	G	A	SNP	FAM212A	ENST00000333323	human	ensembl	74_37	+1	known	missense	c.716	p.R239K	1.000	NULL	NULL	-	no_errors	FAM212A	HGNC	ENSG00000185614				226	0	0	62	22	26.1905
BRD8	0	genome.wustl.edu	37	5	137503739	137503739	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	5	137503739	137503739	G	A	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	missense	c.671	p.S224F	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983				210	0	0	60	60	50
PCDHA10	0	genome.wustl.edu	37	5	140237548	140237548	+	Missense_Mutation	SNP	A	A	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	5	140237548	140237548	A	G	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	missense	c.1915	p.T639A	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120				45	0	0	37	3	7.5
IL17B	0	genome.wustl.edu	37	5	148754004	148754004	+	Silent	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	5	148754004	148754004	C	T	SNP	IL17B	ENST00000261796	human	ensembl	74_37	-1	known	silent	c.471	p.P157	0.000	pfam_IL-17_fam	pfam_IL-17_fam,prints_IL-17_chr	-	no_errors	IL17B	HGNC	ENSG00000127743				113	0	0	57	5	8.06452
HSF2	0	genome.wustl.edu	37	6	122743424	122743424	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	6	122743424	122743424	G	A	SNP	HSF2	ENST00000368455	human	ensembl	74_37	+1	known	missense	c.811	p.V271I	0.997	pfam_Vert_HSTF_C	pfam_Vert_HSTF_C,pfam_HSF_DNA-bd,smart_HSF_DNA-bd,prints_HSF_DNA-bd	-	no_errors	HSF2	HGNC	ENSG00000025156				168	0	0	165	9	5.17241
GRM1	0	genome.wustl.edu	37	6	146720605	146720605	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	6	146720605	146720605	C	A	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	nonsense	c.2430	p.Y810*	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				140	0	0	96	6	5.88235
OR14J1	0	genome.wustl.edu	37	6	29274611	29274611	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	6	29274611	29274611	G	A	SNP	OR14J1	ENST00000377160	human	ensembl	74_37	+1	known	missense	c.145	p.V49M	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14J1	HGNC	ENSG00000204695				169	0	0	136	14	9.33333
PRRC2A	0	genome.wustl.edu	37	6	31593818	31593818	+	Silent	SNP	C	C	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	6	31593818	31593818	C	G	SNP	PRRC2A	ENST00000376007	human	ensembl	74_37	+1	known	silent	c.861	p.G287	0.997	NULL	pfam_BAT2_N	-	no_errors	PRRC2A	HGNC	ENSG00000204469				102	0	0	37	27	42.1875
C6orf1	0	genome.wustl.edu	37	6	34214824	34214824	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	6	34214824	34214824	G	A	SNP	C6orf1	ENST00000394990	human	ensembl	74_37	-1	known	missense	c.122	p.P41L	0.992	NULL	NULL	-	no_errors	C6orf1	HGNC	ENSG00000186577				217	0	0	125	14	10.0719
TRERF1	0	genome.wustl.edu	37	6	42231269	42231269	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	6	42231269	42231269	G	A	SNP	TRERF1	ENST00000541110	human	ensembl	74_37	-1	known	missense	c.1673	p.P558L	0.984	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	TRERF1	HGNC	ENSG00000124496				93	0	0	60	4	6.25
CD2AP	0	genome.wustl.edu	37	6	47501376	47501376	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	6	47501376	47501376	G	T	SNP	CD2AP	ENST00000359314	human	ensembl	74_37	+1	known	missense	c.204	p.L68F	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	CD2AP	HGNC	ENSG00000198087				68	0	0	53	4	7.01754
CNTNAP2	0	genome.wustl.edu	37	7	146536823	146536823	+	Missense_Mutation	SNP	T	T	C			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	7	146536823	146536823	T	C	SNP	CNTNAP2	ENST00000361727	human	ensembl	74_37	+1	known	missense	c.229	p.S77P	0.978	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP2	HGNC	ENSG00000174469				93	0	0	63	4	5.97015
SNORD93	0	genome.wustl.edu	37	7	22896252	22896252	+	RNA	SNP	A	A	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	7	22896252	22896252	A	T	SNP	SNORD93	ENST00000408813	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	SNORD93	HGNC	ENSG00000221740				127	0	0	77	6	7.22892
BRAT1	0	genome.wustl.edu	37	7	2594051	2594051	+	Silent	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	7	2594051	2594051	G	A	SNP	BRAT1	ENST00000340611	human	ensembl	74_37	-1	known	silent	c.15	p.C5	0.884	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	BRAT1	HGNC	ENSG00000106009				61	0	0	42	6	12.5
CLIP2	0	genome.wustl.edu	37	7	73771749	73771749	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	7	73771749	73771749	C	A	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	+1	known	missense	c.1157	p.T386K	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665				53	0	0	18	9	33.3333
SDAD1P1	0	genome.wustl.edu	37	8	26236978	26236978	+	RNA	SNP	C	C	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	8	26236978	26236978	C	T	SNP	SDAD1P1	ENST00000519902	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.901	-	-	-	no_errors	SDAD1P1	HGNC	ENSG00000228451				54	0	0	38	3	7.31707
RPS20	0	genome.wustl.edu	37	8	56986648	56986648	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	8	56986648	56986648	G	T	SNP	RPS20	ENST00000009589	human	ensembl	74_37	-1	known	missense	c.74	p.T25K	1.000	pfam_Ribosomal_S10_dom,superfamily_Ribosomal_S10_dom,prints_Ribosomal_S10,tigrfam_Ribosomal_S10_euk/arc	pfam_Ribosomal_S10_dom,superfamily_Ribosomal_S10_dom,prints_Ribosomal_S10,tigrfam_Ribosomal_S10_euk/arc	-	no_errors	RPS20	HGNC	ENSG00000008988				171	1	0.581395	109	28	20.438
RABEPK	0	genome.wustl.edu	37	9	127990211	127990211	+	Silent	SNP	A	A	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	9	127990211	127990211	A	G	SNP	RABEPK	ENST00000373538	human	ensembl	74_37	+1	known	silent	c.549	p.P183	0.998	NULL	pfam_Kelch_2,pfam_Kelch_1	-	no_errors	RABEPK	HGNC	ENSG00000136933				98	0	0	58	6	9.375
NHS	0	genome.wustl.edu	37	X	17745826	17745826	+	Silent	SNP	G	G	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	X	17745826	17745826	G	A	SNP	NHS	ENST00000380060	human	ensembl	74_37	+1	known	silent	c.3537	p.L1179	0.998	NULL	NULL	-	no_errors	NHS	HGNC	ENSG00000188158				129	1	0.769231	69	19	21.5909
MAGEB10	0	genome.wustl.edu	37	X	27840218	27840218	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	X	27840218	27840218	C	A	SNP	MAGEB10	ENST00000356790	human	ensembl	74_37	+1	known	missense	c.795	p.N265K	0.000	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB10	HGNC	ENSG00000177689				37	0	0	31	6	16.2162
ARSD	0	genome.wustl.edu	37	X	2836084	2836084	+	Silent	SNP	C	C	G			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	X	2836084	2836084	C	G	SNP	ARSD	ENST00000381154	human	ensembl	74_37	-1	known	silent	c.624	p.A208	0.000	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSD	HGNC	ENSG00000006756				16	0	0	9	7	43.75
PCDH19	0	genome.wustl.edu	37	X	99551591	99551591	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	X	99551591	99551591	C	A	SNP	PCDH19	ENST00000373034	human	ensembl	74_37	-1	known	missense	c.3131	p.C1044F	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH19	HGNC	ENSG00000165194				41	0	0	25	6	19.3548
MED8	0	genome.wustl.edu	37	1	43850142	43850143	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	1	43850142	43850143	-	T	INS	MED8	ENST00000290663	human	ensembl	74_37	-1	known	frame_shift_ins	c.885_884	p.N295fs	0.000:0.000	NULL	pfam_Mediatior_Med8_fun/met	-	no_errors	MED8	HGNC	ENSG00000159479				30	0	0	17	2	10.5263
ENSG00000259648	0	genome.wustl.edu	37	14	68082934	68082934	+	RNA	DEL	T	T	-			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	14	68082934	68082934	T	-	DEL	ENSG00000259648	ENST00000559968	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RP11-643G16.4	Clone_based_vega_gene	ENSG00000259648				24	0	0	25	4	13.7931
BEST2	0	genome.wustl.edu	37	19	12868868	12868870	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	19	12868868	12868870	GAG	-	DEL	BEST2	ENST00000042931	human	ensembl	74_37	+1	known	in_frame_del	c.1507_1509	p.E506in_frame_del	0.999:0.999:0.994	NULL	pfam_Bestrophin/UPF0187	-	no_errors	BEST2	HGNC	ENSG00000039987				70	0	0	20	2	9.09091
MAP7D3	0	genome.wustl.edu	37	X	135313186	135313186	+	RNA	DEL	T	T	-			TCGA-D7-8574-01A-13D-2340-08	TCGA-D7-8574-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b8bb9319-5450-418d-874c-e117448cecfe	2c754412-22e7-471f-b5f7-a390110559b7	X	135313186	135313186	T	-	DEL	MAP7D3	ENST00000477124	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.018	-	-	-	no_errors	MAP7D3	HGNC	ENSG00000129680				17	0	0	15	3	16.6667
