Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACTBL2	0	genome.wustl.edu	37	5	56777878	56777878	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	5	56777878	56777878	G	A	SNP	ACTBL2	ENST00000423391	human	ensembl	74_37	-1	known	silent	c.657	p.Y219	0.961	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTBL2	HGNC	ENSG00000169067	tier1	rs142342493	-	157	0	0.00	140	8	5.41
ADSSL1	0	genome.wustl.edu	37	14	105206963	105206963	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	14	105206963	105206963	G	A	SNP	ADSSL1	ENST00000332972	human	ensembl	74_37	+1	known	missense	c.631	p.G211R	1.000	pfam_Adenylosuccinate_synthetase,superfamily_P-loop_NTPase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	pfam_Adenylosuccinate_synthetase,superfamily_P-loop_NTPase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	-	no_errors	ADSSL1	HGNC	ENSG00000185100	tier1	-	-	206	0	0.00	226	13	5.44
BCOR	0	genome.wustl.edu	37	X	39932987	39932987	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	X	39932987	39932987	G	A	SNP	BCOR	ENST00000378444	human	ensembl	74_37	-1	known	nonsense	c.1612	p.Q538*	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337	tier1	-	-	63	0	0.00	58	9	13.43
C1QTNF9	0	genome.wustl.edu	37	13	24895861	24895861	+	Silent	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	13	24895861	24895861	C	T	SNP	C1QTNF9	ENST00000332018	human	ensembl	74_37	+1	known	silent	c.957	p.D319	0.885	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF9	HGNC	ENSG00000240654	tier1	-	-	237	0	0.00	222	13	5.51
CD209	0	genome.wustl.edu	37	19	7810611	7810611	+	Missense_Mutation	SNP	C	C	G			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	19	7810611	7810611	C	G	SNP	CD209	ENST00000315599	human	ensembl	74_37	-1	known	missense	c.541	p.G181R	0.001	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CD209	HGNC	ENSG00000090659	tier1	-	-	283	0	0.00	297	18	5.70
CD34	0	genome.wustl.edu	37	1	208063101	208063101	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	1	208063101	208063101	A	-	DEL	CD34	ENST00000367036	human	ensembl	74_37	-1	known	frame_shift_del	c.82	p.S28fs	0.000	NULL	pfam_CD34/Podocalyxin,prints_CD34	-	no_errors	CD34	HGNC	ENSG00000174059	tier1			25	0	0.00	36	4	10.00
CES1	0	genome.wustl.edu	37	16	55862883	55862883	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	16	55862883	55862883	C	A	SNP	CES1	ENST00000360526	human	ensembl	74_37	-1	known	missense	c.56	p.G19V	0.976	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES1	HGNC	ENSG00000198848	tier1	rs3826190	-	23	0	0.00	23	7	23.33
CRYGA	0	genome.wustl.edu	37	2	209025555	209025555	+	Silent	SNP	A	A	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	2	209025555	209025555	A	T	SNP	CRYGA	ENST00000304502	human	ensembl	74_37	-1	known	silent	c.498	p.S166	0.935	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYGA	HGNC	ENSG00000168582	tier1	-	-	227	0	0.00	206	15	6.79
ENSG00000225411	0	genome.wustl.edu	37	9	68400291	68400291	+	RNA	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	9	68400291	68400291	C	T	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	-	-	31	0	0.00	18	5	20.00
ENSG00000225411	0	genome.wustl.edu	37	9	68401278	68401278	+	RNA	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	9	68401278	68401278	G	A	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	rs141652755	-	12	0	0.00	7	5	41.67
ENSG00000236432	0	genome.wustl.edu	37	2	228102892	228102893	+	Splice_Site	INS	-	-	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	2	228102892	228102893	-	A	INS	ENSG00000236432	ENST00000437673	human	ensembl	74_37	-1	known	splice_site_ins	c.NULL	NULL	0.001:0.001	-	-	-	no_errors	AC097662.2	Clone_based_vega_gene	ENSG00000236432	tier1			8	0	0.00	17	5	22.73
ENSG00000244327	0	genome.wustl.edu	37	3	142184163	142184164	+	RNA	INS	-	-	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	142184163	142184164	-	A	INS	ENSG00000244327	ENST00000460977	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.001	-	-	-	no_errors	RP11-383G6.3	Clone_based_vega_gene	ENSG00000244327	tier1			21	0	0.00	29	2	6.45
ENSG00000257434	0	genome.wustl.edu	37	12	75435987	75435987	+	RNA	DEL	T	T	-			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	12	75435987	75435987	T	-	DEL	ENSG00000257434	ENST00000547040	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-81K13.1	Clone_based_vega_gene	ENSG00000257434	tier1			15	0	0.00	12	3	20.00
EXPH5	0	genome.wustl.edu	37	11	108385484	108385484	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	11	108385484	108385484	G	A	SNP	EXPH5	ENST00000265843	human	ensembl	74_37	-1	known	silent	c.750	p.N250	0.007	NULL	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	EXPH5	HGNC	ENSG00000110723	tier1	-	-	167	0	0.00	153	17	10.00
F2RL3	0	genome.wustl.edu	37	19	17001175	17001177	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	19	17001175	17001177	CTG	-	DEL	F2RL3	ENST00000248076	human	ensembl	74_37	+1	known	in_frame_del	c.901_903	p.L304in_frame_del	0.001:0.012:0.015	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prot_act_rcpt_4,prints_GPCR_Rhodpsn,prints_Protea_act_rcpt	-	no_errors	F2RL3	HGNC	ENSG00000127533	tier1			37	0	0.00	28	3	9.68
FAM43B	0	genome.wustl.edu	37	1	20880268	20880270	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	1	20880268	20880270	GAG	-	DEL	FAM43B	ENST00000332947	human	ensembl	74_37	+1	known	in_frame_del	c.802_804	p.E271in_frame_del	1.000:1.000:1.000	NULL	smart_PTB/PI_dom	-	no_errors	FAM43B	HGNC	ENSG00000183114	tier1			9	0	0.00	7	4	36.36
FFAR2	0	genome.wustl.edu	37	19	35941517	35941517	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	19	35941517	35941517	C	T	SNP	FFAR2	ENST00000246549	human	ensembl	74_37	+1	known	missense	c.901	p.R301C	0.025	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_GPR40-rel_orph	-	no_errors	FFAR2	HGNC	ENSG00000126262	tier1	-	-	140	0	0.00	162	10	5.81
HLA-C	0	genome.wustl.edu	37	6	31238153	31238153	+	Silent	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	6	31238153	31238153	C	T	SNP	HLA-C	ENST00000383329	human	ensembl	74_37	-1	known	silent	c.729	p.R243	0.984	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-C	HGNC	ENSG00000204525	tier1	-	-	138	0	0.00	138	9	6.12
HRH4	0	genome.wustl.edu	37	18	22057102	22057102	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	18	22057102	22057102	C	T	SNP	HRH4	ENST00000256906	human	ensembl	74_37	+1	known	missense	c.749	p.S250L	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H4_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H4_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HRH4	HGNC	ENSG00000134489	tier1	-	-	191	0	0.00	152	11	6.75
INCENP	0	genome.wustl.edu	37	11	61895761	61895761	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	11	61895761	61895761	G	A	SNP	INCENP	ENST00000394818	human	ensembl	74_37	+1	known	missense	c.128	p.R43H	0.989	NULL	pfam_INCENP_N,pfam_Inner_centromere_prot_ARK-bd	-	no_errors	INCENP	HGNC	ENSG00000149503	tier1	-	-	57	0	0.00	59	5	7.81
IRF7	0	genome.wustl.edu	37	11	613841	613841	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	11	613841	613841	G	-	DEL	IRF7	ENST00000330243	human	ensembl	74_37	-1	known	frame_shift_del	c.830	p.P277fs	0.000	NULL	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF7	HGNC	ENSG00000185507	tier1			25	0	0.00	21	2	8.70
KCNB2	0	genome.wustl.edu	37	8	73849388	73849388	+	Missense_Mutation	SNP	A	A	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	8	73849388	73849388	A	T	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	missense	c.1798	p.T600S	1.000	pfam_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674	tier1	-	-	154	0	0.00	137	8	5.48
KCNJ15	0	genome.wustl.edu	37	21	39671294	39671294	+	Silent	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	21	39671294	39671294	C	T	SNP	KCNJ15	ENST00000328656	human	ensembl	74_37	+1	known	silent	c.111	p.N37	0.914	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.3,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.1	-	no_errors	KCNJ15	HGNC	ENSG00000157551	tier1	-	-	114	0	0.00	128	8	5.88
LINC00273	0	genome.wustl.edu	37	16	33961363	33961363	+	RNA	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	16	33961363	33961363	C	T	SNP	LINC00273	ENST00000539813	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	LINC00273	HGNC	ENSG00000256642	tier1	-	-	8	0	0.00	0	4	100.00
LOC101927806	0	genome.wustl.edu	37	1	17199803	17199803	+	RNA	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	1	17199803	17199803	C	T	SNP	LOC101927806	ENST00000453554	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	U1	RFAM	ENSG00000228549	tier1	rs7417079	-	12	0	0.00	9	4	30.77
MALAT1	0	genome.wustl.edu	37	11	65273569	65273570	+	RNA	DEL	AA	AA	-			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	11	65273569	65273570	AA	-	DEL	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1			66	0	0.00	60	10	14.29
MASP1	0	genome.wustl.edu	37	3	186943167	186943167	+	Silent	SNP	T	T	C			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	186943167	186943167	T	C	SNP	MASP1	ENST00000337774	human	ensembl	74_37	-1	known	silent	c.1686	p.P562	0.001	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	MASP1	HGNC	ENSG00000127241	tier1	-	-	192	0	0.00	204	18	8.07
MTERFD3	0	genome.wustl.edu	37	12	107372096	107372096	+	Missense_Mutation	SNP	T	T	G			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	12	107372096	107372096	T	G	SNP	MTERFD3	ENST00000240050	human	ensembl	74_37	-1	known	missense	c.397	p.I133L	1.000	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD3	HGNC	ENSG00000120832	tier1	-	-	187	0	0.00	156	13	7.69
MUC4	0	genome.wustl.edu	37	3	195512079	195512079	+	Silent	SNP	C	C	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	195512079	195512079	C	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.6372	p.G2124	0.377	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	rs200031229	-	17	0	0.00	10	5	33.33
MUC4	0	genome.wustl.edu	37	3	195512767	195512767	+	Missense_Mutation	SNP	T	T	G			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	195512767	195512767	T	G	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.5684	p.N1895T	0.003	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	rs2641778	-	15	0	0.00	6	8	57.14
MUC4	0	genome.wustl.edu	37	3	195512768	195512768	+	Missense_Mutation	SNP	T	T	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	195512768	195512768	T	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.5683	p.N1895Y	0.004	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	rs2688553	-	15	0	0.00	6	8	57.14
MUC4	0	genome.wustl.edu	37	3	195510943	195510943	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	195510943	195510943	G	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.7508	p.S2503Y	0.335	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				10	0	0.00	3	7	70.00
MUC4	0	genome.wustl.edu	37	3	195511911	195511911	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	195511911	195511911	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.6540	p.T2180	0.931	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				19	0	0.00	18	4	18.18
NFATC2	0	genome.wustl.edu	37	20	50140209	50140209	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	20	50140209	50140209	C	T	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.571	p.V191I	1.000	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096	tier1	-	-	122	0	0.00	123	9	6.82
NLRP1	0	genome.wustl.edu	37	17	5462596	5462596	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	17	5462596	5462596	G	A	SNP	NLRP1	ENST00000572272	human	ensembl	74_37	-1	known	missense	c.1420	p.R474C	0.000	pfscan_NACHT_NTPase	pfam_CARD,pfam_DAPIN,pfam_Leu-rich_rpt,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD,pfscan_DAPIN,prints_Disease_R	-	no_errors	NLRP1	HGNC	ENSG00000091592	tier1	rs202231072	-	74	0	0.00	64	5	7.25
PAEP	0	genome.wustl.edu	37	9	138454248	138454248	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	9	138454248	138454248	G	A	SNP	PAEP	ENST00000277508	human	ensembl	74_37	+1	known	missense	c.205	p.E69K	0.048	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Blactoglobulin	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Blactoglobulin,prints_Lipocalin	-	no_errors	PAEP	HGNC	ENSG00000122133	tier1	-	-	138	0	0.00	120	7	5.51
PAGE3	0	genome.wustl.edu	37	X	55290278	55290278	+	Missense_Mutation	SNP	G	G	C			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	X	55290278	55290278	G	C	SNP	PAGE3	ENST00000374951	human	ensembl	74_37	-1	known	missense	c.59	p.S20C	0.003	pfam_GAGE	pfam_GAGE	-	no_errors	PAGE3	HGNC	ENSG00000204279	tier1	-	-	79	0	0.00	51	5	8.93
PLS3	0	genome.wustl.edu	37	X	114844579	114844579	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	X	114844579	114844579	C	-	DEL	PLS3	ENST00000355899	human	ensembl	74_37	+1	known	frame_shift_del	c.17	p.T7fs	0.985	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_EF_hand_dom,smart_CH-domain,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	PLS3	HGNC	ENSG00000102024	tier1			55	0	0.00	42	4	8.70
POMGNT1	0	genome.wustl.edu	37	1	46657847	46657847	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	1	46657847	46657847	G	A	SNP	POMGNT1	ENST00000371986	human	ensembl	74_37	-1	known	nonsense	c.1462	p.R488*	1.000	pfam_Glyco_trans_13	pfam_Glyco_trans_13	-	no_errors	POMGNT1	HGNC	ENSG00000085998	tier1	-	-	127	0	0.00	96	15	13.51
SAMD7	0	genome.wustl.edu	37	3	169637347	169637347	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	169637347	169637347	C	T	SNP	SAMD7	ENST00000335556	human	ensembl	74_37	+1	known	missense	c.61	p.P21S	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD7	HGNC	ENSG00000187033	tier1	-	-	122	0	0.00	120	7	5.51
SEMA6D	0	genome.wustl.edu	37	15	48059279	48059279	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	15	48059279	48059279	G	T	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	missense	c.1754	p.G585V	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872	tier1	-	-	80	0	0.00	110	6	5.17
SVIL	0	genome.wustl.edu	37	10	29773703	29773703	+	Missense_Mutation	SNP	A	A	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	10	29773703	29773703	A	T	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.4837	p.L1613I	0.560	smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321	tier1	-	-	94	0	0.00	64	5	7.14
TAOK2	0	genome.wustl.edu	37	16	30002108	30002108	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	16	30002108	30002108	C	T	SNP	TAOK2	ENST00000279394	human	ensembl	74_37	+1	known	missense	c.2449	p.R817W	1.000	superfamily_Homeodomain-like	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Homeodomain-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK2	HGNC	ENSG00000149930	tier1	-	-	147	0	0.00	157	9	5.42
TBC1D25	0	genome.wustl.edu	37	X	48419180	48419180	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	X	48419180	48419180	G	A	SNP	TBC1D25	ENST00000376771	human	ensembl	74_37	+1	known	silent	c.1884	p.E628	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D25	HGNC	ENSG00000068354	tier1	-	-	89	0	0.00	75	8	9.64
TMEM100	0	genome.wustl.edu	37	17	53798077	53798077	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	17	53798077	53798077	G	A	SNP	TMEM100	ENST00000424486	human	ensembl	74_37	-1	known	missense	c.355	p.R119W	1.000	NULL	NULL	-	no_errors	TMEM100	HGNC	ENSG00000166292	tier1	-	-	202	0	0.00	167	10	5.65
TNS1	0	genome.wustl.edu	37	2	218669196	218669196	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	2	218669196	218669196	C	T	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	missense	c.5194	p.G1732S	0.989	pfam_PTB,smart_PTB/PI_dom	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308	tier1	rs143428830	-	167	0	0.00	163	11	6.32
TPGS2	0	genome.wustl.edu	37	18	34380233	34380233	+	Missense_Mutation	SNP	T	T	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	18	34380233	34380233	T	A	SNP	TPGS2	ENST00000334295	human	ensembl	74_37	-1	known	missense	c.424	p.S142C	1.000	smart_SMI1/KNR4_like_dom	smart_SMI1/KNR4_like_dom	-	no_errors	TPGS2	HGNC	ENSG00000134779	tier1	-	-	293	0	0.00	290	16	5.23
TRIM9	0	genome.wustl.edu	37	14	51477195	51477195	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	14	51477195	51477195	G	A	SNP	TRIM9	ENST00000338969	human	ensembl	74_37	-1	known	silent	c.1059	p.I353	1.000	smart_Bbox_C	pfam_SPRY_rcpt,pfam_Fibronectin_type3,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM9	HGNC	ENSG00000100505	tier1	-	-	121	0	0.00	113	8	6.61
ZC3H12D	0	genome.wustl.edu	37	6	149772563	149772563	+	Silent	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	6	149772563	149772563	C	T	SNP	ZC3H12D	ENST00000389942	human	ensembl	74_37	-1	known	silent	c.840	p.P280	0.187	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12D	HGNC	ENSG00000178199	tier1	-	-	25	0	0.00	22	4	15.38
RHCE	0	genome.wustl.edu	37	1	25688935	25688935	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	1	25688935	25688935	G	A	SNP	RHCE	ENST00000413854	human	ensembl	74_37	-1	known	missense	c.1183	p.R395C	0.000	NULL	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHCE	HGNC	ENSG00000188672				48	0	0	38	3	7.31707
SESN2	0	genome.wustl.edu	37	1	28595728	28595728	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	1	28595728	28595728	G	A	SNP	SESN2	ENST00000253063	human	ensembl	74_37	+1	known	missense	c.125	p.R42Q	0.707	pfam_PA26	pfam_PA26	-	no_errors	SESN2	HGNC	ENSG00000130766				107	0	0	141	8	5.36913
POMGNT1	0	genome.wustl.edu	37	1	46657847	46657847	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	1	46657847	46657847	G	A	SNP	POMGNT1	ENST00000371986	human	ensembl	74_37	-1	known	nonsense	c.1462	p.R488*	1.000	pfam_Glyco_trans_13	pfam_Glyco_trans_13	-	no_errors	POMGNT1	HGNC	ENSG00000085998				110	0	0	90	13	12.6214
NRAP	0	genome.wustl.edu	37	10	115370264	115370264	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	10	115370264	115370264	G	A	SNP	NRAP	ENST00000369358	human	ensembl	74_37	-1	known	missense	c.3581	p.T1194M	0.568	smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_Znf_LIM,smart_Znf_LIM,smart_Nebulin_35r-motif,pfscan_Znf_LIM,pfscan_Nebulin_35r-motif,prints_Nebulin	-	no_errors	NRAP	HGNC	ENSG00000197893				107	0	0	91	7	7.14286
KCNK18	0	genome.wustl.edu	37	10	118960783	118960783	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	10	118960783	118960783	G	A	SNP	KCNK18	ENST00000334549	human	ensembl	74_37	+1	known	missense	c.337	p.V113M	0.961	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl	-	no_errors	KCNK18	HGNC	ENSG00000186795				150	1	0.662252	151	19	11.1765
SVIL	0	genome.wustl.edu	37	10	29773703	29773703	+	Missense_Mutation	SNP	A	A	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	10	29773703	29773703	A	T	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.4837	p.L1613I	0.560	smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				83	0	0	58	4	6.45161
EXPH5	0	genome.wustl.edu	37	11	108385484	108385484	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	11	108385484	108385484	G	A	SNP	EXPH5	ENST00000265843	human	ensembl	74_37	-1	known	silent	c.750	p.N250	0.007	NULL	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	EXPH5	HGNC	ENSG00000110723				153	0	0	138	16	10.3896
MTERFD3	0	genome.wustl.edu	37	12	107372096	107372096	+	Missense_Mutation	SNP	T	T	G			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	12	107372096	107372096	T	G	SNP	MTERFD3	ENST00000240050	human	ensembl	74_37	-1	known	missense	c.397	p.I133L	1.000	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD3	HGNC	ENSG00000120832				172	0	0	149	10	6.28931
C1QTNF9	0	genome.wustl.edu	37	13	24895861	24895861	+	Silent	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	13	24895861	24895861	C	T	SNP	C1QTNF9	ENST00000332018	human	ensembl	74_37	+1	known	silent	c.957	p.D319	0.885	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF9	HGNC	ENSG00000240654				215	0	0	192	11	5.41872
TPTE2P6	0	genome.wustl.edu	37	13	25168432	25168432	+	RNA	SNP	T	T	C			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	13	25168432	25168432	T	C	SNP	TPTE2P6	ENST00000440905	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TPTE2P6	HGNC	ENSG00000205822				37	0	0	25	3	10.7143
ADSSL1	0	genome.wustl.edu	37	14	105206963	105206963	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	14	105206963	105206963	G	A	SNP	ADSSL1	ENST00000332972	human	ensembl	74_37	+1	known	missense	c.631	p.G211R	1.000	pfam_Adenylosuccinate_synthetase,superfamily_P-loop_NTPase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	pfam_Adenylosuccinate_synthetase,superfamily_P-loop_NTPase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	-	no_errors	ADSSL1	HGNC	ENSG00000185100				182	0	0	191	11	5.44554
DHRS4	0	genome.wustl.edu	37	14	24424420	24424420	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	14	24424420	24424420	C	T	SNP	DHRS4	ENST00000313250	human	ensembl	74_37	+1	known	missense	c.305	p.T102M	0.996	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DHB_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect	-	no_errors	DHRS4	HGNC	ENSG00000157326				46	0	0	36	4	10
TRIM9	0	genome.wustl.edu	37	14	51477195	51477195	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	14	51477195	51477195	G	A	SNP	TRIM9	ENST00000338969	human	ensembl	74_37	-1	known	silent	c.1059	p.I353	1.000	smart_Bbox_C	pfam_SPRY_rcpt,pfam_Fibronectin_type3,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM9	HGNC	ENSG00000100505				105	0	0	101	7	6.48148
WHAMMP3	0	genome.wustl.edu	37	15	23205108	23205108	+	RNA	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	15	23205108	23205108	C	T	SNP	WHAMMP3	ENST00000400153	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WHAMMP3	HGNC	ENSG00000187667				18	0	0	27	4	12.9032
TAOK2	0	genome.wustl.edu	37	16	30002108	30002108	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	16	30002108	30002108	C	T	SNP	TAOK2	ENST00000279394	human	ensembl	74_37	+1	known	missense	c.2449	p.R817W	1.000	superfamily_Homeodomain-like	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Homeodomain-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK2	HGNC	ENSG00000149930				133	0	0	139	8	5.44218
TMEM100	0	genome.wustl.edu	37	17	53798077	53798077	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	17	53798077	53798077	G	A	SNP	TMEM100	ENST00000424486	human	ensembl	74_37	-1	known	missense	c.355	p.R119W	1.000	NULL	NULL	-	no_errors	TMEM100	HGNC	ENSG00000166292				177	0	0	147	8	5.16129
NLRP1	0	genome.wustl.edu	37	17	5462596	5462596	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	17	5462596	5462596	G	A	SNP	NLRP1	ENST00000572272	human	ensembl	74_37	-1	known	missense	c.1420	p.R474C	0.000	pfscan_NACHT_NTPase	pfam_CARD,pfam_DAPIN,pfam_Leu-rich_rpt,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD,pfscan_DAPIN,prints_Disease_R	-	no_errors	NLRP1	HGNC	ENSG00000091592				67	0	0	60	5	7.69231
HRH4	0	genome.wustl.edu	37	18	22057102	22057102	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	18	22057102	22057102	C	T	SNP	HRH4	ENST00000256906	human	ensembl	74_37	+1	known	missense	c.749	p.S250L	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H4_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H4_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HRH4	HGNC	ENSG00000134489				181	0	0	139	10	6.71141
CHST9	0	genome.wustl.edu	37	18	24722744	24722744	+	Silent	SNP	G	G	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	18	24722744	24722744	G	T	SNP	CHST9	ENST00000284224	human	ensembl	74_37	-1	known	silent	c.30	p.P10	1.000	NULL	pfam_Sulfotransferase	-	no_errors	CHST9	HGNC	ENSG00000154080				150	0	0	151	8	5.03145
TPGS2	0	genome.wustl.edu	37	18	34380233	34380233	+	Missense_Mutation	SNP	T	T	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	18	34380233	34380233	T	A	SNP	TPGS2	ENST00000334295	human	ensembl	74_37	-1	known	missense	c.424	p.S142C	1.000	smart_SMI1/KNR4_like_dom	smart_SMI1/KNR4_like_dom	-	no_errors	TPGS2	HGNC	ENSG00000134779				245	0	0	245	14	5.40541
FFAR2	0	genome.wustl.edu	37	19	35941517	35941517	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	19	35941517	35941517	C	T	SNP	FFAR2	ENST00000246549	human	ensembl	74_37	+1	known	missense	c.901	p.R301C	0.025	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_GPR40-rel_orph	-	no_errors	FFAR2	HGNC	ENSG00000126262				132	0	0	143	8	5.29801
CD209	0	genome.wustl.edu	37	19	7810611	7810611	+	Missense_Mutation	SNP	C	C	G			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	19	7810611	7810611	C	G	SNP	CD209	ENST00000315599	human	ensembl	74_37	-1	known	missense	c.541	p.G181R	0.001	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CD209	HGNC	ENSG00000090659				267	0	0	271	18	6.22837
CRYGA	0	genome.wustl.edu	37	2	209025555	209025555	+	Silent	SNP	A	A	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	2	209025555	209025555	A	T	SNP	CRYGA	ENST00000304502	human	ensembl	74_37	-1	known	silent	c.498	p.S166	0.935	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYGA	HGNC	ENSG00000168582				207	0	0	184	14	7.07071
TNS1	0	genome.wustl.edu	37	2	218669196	218669196	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	2	218669196	218669196	C	T	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	missense	c.5194	p.G1732S	0.989	pfam_PTB,smart_PTB/PI_dom	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				152	0	0	144	9	5.88235
KIF16B	0	genome.wustl.edu	37	20	16360357	16360357	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	20	16360357	16360357	G	A	SNP	KIF16B	ENST00000408042	human	ensembl	74_37	-1	known	missense	c.2290	p.H764Y	0.014	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF16B	HGNC	ENSG00000089177				191	1	0.520833	159	9	5.35714
NFATC2	0	genome.wustl.edu	37	20	50140209	50140209	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	20	50140209	50140209	C	T	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.571	p.V191I	1.000	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096				116	0	0	116	8	6.45161
SAMD7	0	genome.wustl.edu	37	3	169637347	169637347	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	169637347	169637347	C	T	SNP	SAMD7	ENST00000335556	human	ensembl	74_37	+1	known	missense	c.61	p.P21S	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD7	HGNC	ENSG00000187033				108	0	0	100	7	6.54206
MASP1	0	genome.wustl.edu	37	3	186943167	186943167	+	Silent	SNP	T	T	C			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	186943167	186943167	T	C	SNP	MASP1	ENST00000337774	human	ensembl	74_37	-1	known	silent	c.1686	p.P562	0.001	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	MASP1	HGNC	ENSG00000127241				173	0	0	189	18	8.69565
MUC4	0	genome.wustl.edu	37	3	195511638	195511638	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	3	195511638	195511638	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.6813	p.T2271	0.110	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				11	0	0	5	3	37.5
ACTBL2	0	genome.wustl.edu	37	5	56777878	56777878	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	5	56777878	56777878	G	A	SNP	ACTBL2	ENST00000423391	human	ensembl	74_37	-1	known	silent	c.657	p.Y219	0.961	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTBL2	HGNC	ENSG00000169067				137	0	0	121	8	6.20155
SCAND3	0	genome.wustl.edu	37	6	28543000	28543000	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	6	28543000	28543000	G	A	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	silent	c.1482	p.H494	0.990	superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040				160	0	0	165	9	5.17241
HLA-C	0	genome.wustl.edu	37	6	31238153	31238153	+	Silent	SNP	C	C	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	6	31238153	31238153	C	T	SNP	HLA-C	ENST00000383329	human	ensembl	74_37	-1	known	silent	c.729	p.R243	0.984	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-C	HGNC	ENSG00000204525				131	0	0	128	8	5.88235
KCNB2	0	genome.wustl.edu	37	8	73849388	73849388	+	Missense_Mutation	SNP	A	A	T			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	8	73849388	73849388	A	T	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	missense	c.1798	p.T600S	1.000	pfam_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				146	0	0	124	8	6.06061
PAEP	0	genome.wustl.edu	37	9	138454248	138454248	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	9	138454248	138454248	G	A	SNP	PAEP	ENST00000277508	human	ensembl	74_37	+1	known	missense	c.205	p.E69K	0.048	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Blactoglobulin	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Blactoglobulin,prints_Lipocalin	-	no_errors	PAEP	HGNC	ENSG00000122133				127	0	0	106	6	5.35714
BCOR	0	genome.wustl.edu	37	X	39932987	39932987	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	X	39932987	39932987	G	A	SNP	BCOR	ENST00000378444	human	ensembl	74_37	-1	known	nonsense	c.1612	p.Q538*	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337				59	0	0	52	8	13.3333
TBC1D25	0	genome.wustl.edu	37	X	48419180	48419180	+	Silent	SNP	G	G	A			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	X	48419180	48419180	G	A	SNP	TBC1D25	ENST00000376771	human	ensembl	74_37	+1	known	silent	c.1884	p.E628	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D25	HGNC	ENSG00000068354				82	0	0	70	7	9.09091
PAGE3	0	genome.wustl.edu	37	X	55290278	55290278	+	Missense_Mutation	SNP	G	G	C			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	X	55290278	55290278	G	C	SNP	PAGE3	ENST00000374951	human	ensembl	74_37	-1	known	missense	c.59	p.S20C	0.003	pfam_GAGE	pfam_GAGE	-	no_errors	PAGE3	HGNC	ENSG00000204279				65	0	0	49	5	9.25926
FAM43B	0	genome.wustl.edu	37	1	20880268	20880270	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	1	20880268	20880270	GAG	-	DEL	FAM43B	ENST00000332947	human	ensembl	74_37	+1	known	in_frame_del	c.802_804	p.E271in_frame_del	1.000:1.000:1.000	NULL	smart_PTB/PI_dom	-	no_errors	FAM43B	HGNC	ENSG00000183114				9	0	0	9	2	18.1818
LIPF	0	genome.wustl.edu	37	10	90428423	90428425	+	In_Frame_Del	DEL	ATG	ATG	-			TCGA-D7-A6ET-01A-32D-A32N-08	TCGA-D7-A6ET-10A-01D-A32N-08	ATG	ATG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e54be536-5456-4fb5-8180-9b9307cf70b1	9ca2150a-60e7-487e-8d5c-050042020259	10	90428423	90428425	ATG	-	DEL	LIPF	ENST00000394375	human	ensembl	74_37	+1	known	in_frame_del	c.362_364	p.D122in_frame_del	1.000:1.000:1.000	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPF	HGNC	ENSG00000182333				77	0	0	90	5	5.26316
