Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AHNAK2	0	genome.wustl.edu	37	14	105407443	105407443	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	14	105407443	105407443	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.14345	p.S4782F	0.003	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	146	0	0.00	101	6	5.61
ALG10B	0	genome.wustl.edu	37	12	38712112	38712112	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	38712112	38712112	G	T	SNP	ALG10B	ENST00000308742	human	ensembl	74_37	+1	known	missense	c.221	p.G74V	1.000	pfam_Alg10,pirsf_Alg10	pfam_Alg10,pirsf_Alg10	-	no_errors	ALG10B	HGNC	ENSG00000175548	tier1	-	-	385	0	0.00	327	23	6.57
AQP5	0	genome.wustl.edu	37	12	50356011	50356011	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	50356011	50356011	G	A	SNP	AQP5	ENST00000293599	human	ensembl	74_37	+1	known	missense	c.211	p.A71T	0.993	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,prints_Aquaporin_5,tigrfam_MIP	-	no_errors	AQP5	HGNC	ENSG00000161798	tier1	-	-	63	0	0.00	69	7	9.21
ATP1A3	0	genome.wustl.edu	37	19	42485918	42485918	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	19	42485918	42485918	G	A	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	missense	c.1258	p.R420C	1.000	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A3	HGNC	ENSG00000105409	tier1	-	-	114	0	0.00	73	7	8.75
C12orf42	0	genome.wustl.edu	37	12	103696092	103696092	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	103696092	103696092	G	A	SNP	C12orf42	ENST00000378113	human	ensembl	74_37	-1	known	missense	c.877	p.R293W	0.000	NULL	NULL	-	no_errors	C12orf42	HGNC	ENSG00000179088	tier1	-	-	105	0	0.00	80	7	8.05
C21orf2	0	genome.wustl.edu	37	21	45750179	45750181	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	21	45750179	45750181	GCA	-	DEL	C21orf2	ENST00000339818	human	ensembl	74_37	-1	known	in_frame_del	c.673_671	p.L224in_frame_del	1.000:1.000:1.000	NULL	smart_U2A'_phosphoprotein32A_C	-	no_errors	C21orf2	HGNC	ENSG00000160226	tier1			54	0	0.00	30	4	11.76
CDH1	0	genome.wustl.edu	37	16	68846036	68846036	+	Splice_Site	SNP	A	A	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	16	68846036	68846036	A	G	SNP	CDH1	ENST00000261769	human	ensembl	74_37	+1	known	splice_site	c.1009-2	e8-2	1.000	-	-	-	no_errors	CDH1	HGNC	ENSG00000039068	tier1	-	-	146	0	0.00	88	29	24.79
CDH9	0	genome.wustl.edu	37	5	26902673	26902673	+	Missense_Mutation	SNP	A	A	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	26902673	26902673	A	C	SNP	CDH9	ENST00000231021	human	ensembl	74_37	-1	known	missense	c.1165	p.L389V	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100	tier1	-	-	120	0	0.00	111	10	8.26
CECR2	0	genome.wustl.edu	37	22	18022583	18022583	+	Silent	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	22	18022583	18022583	G	A	SNP	CECR2	ENST00000400573	human	ensembl	74_37	+1	novel	silent	c.2685	p.P895	0.787	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	CECR2	HGNC	ENSG00000099954	tier1	-	-	183	0	0.00	153	15	8.93
CEP170B	0	genome.wustl.edu	37	14	105360623	105360623	+	Missense_Mutation	SNP	A	A	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	14	105360623	105360623	A	G	SNP	CEP170B	ENST00000453495	human	ensembl	74_37	+1	known	missense	c.4381	p.I1461V	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170B	HGNC	ENSG00000099814	tier1	-	-	96	0	0.00	74	9	10.84
DIAPH2	0	genome.wustl.edu	37	X	96638969	96638969	+	Missense_Mutation	SNP	T	T	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	X	96638969	96638969	T	C	SNP	DIAPH2	ENST00000324765	human	ensembl	74_37	+1	known	missense	c.3071	p.L1024P	0.997	smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH2	HGNC	ENSG00000147202				75	0	0.00	60	4	6.25
DLG1	0	genome.wustl.edu	37	3	196842799	196842799	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	196842799	196842799	G	T	SNP	DLG1	ENST00000346964	human	ensembl	74_37	-1	known	nonsense	c.1541	p.S514*	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ	pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_MAGUK_PEST_N,pfam_L27_1,pfam_PDZ_assoc,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG1	HGNC	ENSG00000075711	tier1	-	-	107	0	0.00	91	11	10.78
DYNC1LI1	0	genome.wustl.edu	37	3	32571050	32571050	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	32571050	32571050	T	-	DEL	DYNC1LI1	ENST00000273130	human	ensembl	74_37	-1	known	frame_shift_del	c.1288	p.I430fs	1.000	pfam_Dynein_light_int_chain	pfam_Dynein_light_int_chain,superfamily_P-loop_NTPase	-	no_errors	DYNC1LI1	HGNC	ENSG00000144635	tier1			27	0	0.00	31	3	8.82
ENSG00000212626	0	genome.wustl.edu	37	18	7301081	7301081	+	RNA	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	18	7301081	7301081	G	A	SNP	ENSG00000212626	ENST00000391324	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.439	-	-	-	no_errors	SNORA48	RFAM	ENSG00000212626	tier1	-	-	117	0	0.00	85	11	11.46
EVC	0	genome.wustl.edu	37	4	5749976	5749976	+	Silent	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	4	5749976	5749976	G	A	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	silent	c.1041	p.T347	0.000	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840	tier1	rs148418233	-	87	0	0.00	66	5	7.04
FRMPD3	0	genome.wustl.edu	37	X	106845698	106845698	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	X	106845698	106845698	C	T	SNP	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	missense	c.4528	p.R1510W	0.995	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234	tier1	-	-	190	0	0.00	131	10	7.09
GABRA4	0	genome.wustl.edu	37	4	46930295	46930295	+	Missense_Mutation	SNP	A	A	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	4	46930295	46930295	A	C	SNP	GABRA4	ENST00000264318	human	ensembl	74_37	-1	known	missense	c.1612	p.W538G	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABBAa4_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA4	HGNC	ENSG00000109158	tier1	-	-	120	0	0.00	94	8	7.84
GRIK5	0	genome.wustl.edu	37	19	42558560	42558560	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	19	42558560	42558560	C	A	SNP	GRIK5	ENST00000301218	human	ensembl	74_37	-1	known	missense	c.968	p.R323L	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK5	HGNC	ENSG00000105737	tier1	-	-	129	0	0.00	117	8	6.25
GRM6	0	genome.wustl.edu	37	5	178413683	178413683	+	Silent	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	178413683	178413683	C	T	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	silent	c.1572	p.P524	0.011	pfam_GPCR_3_9-Cys_dom	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262	tier1	-	-	95	0	0.00	80	7	8.05
HGFAC	0	genome.wustl.edu	37	4	3443800	3443800	+	Silent	SNP	G	G	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	4	3443800	3443800	G	C	SNP	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	silent	c.72	p.L24	0.998	pirsf_Coagulation_fac_XIIa/HGFA	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758	tier1	-	-	78	0	0.00	49	5	9.26
IQSEC1	0	genome.wustl.edu	37	3	12977737	12977737	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	12977737	12977737	G	A	SNP	IQSEC1	ENST00000273221	human	ensembl	74_37	-1	known	missense	c.821	p.A274V	0.001	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC1	HGNC	ENSG00000144711	tier1	-	-	172	0	0.00	110	13	10.48
IRF2BP2	0	genome.wustl.edu	37	1	234743031	234743031	+	Missense_Mutation	SNP	T	T	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	1	234743031	234743031	T	C	SNP	IRF2BP2	ENST00000366609	human	ensembl	74_37	-1	novel	missense	c.1616	p.K539R	1.000	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BP2	HGNC	ENSG00000168264	tier1	-	-	218	0	0.00	140	12	7.89
ITIH6	0	genome.wustl.edu	37	X	54777493	54777493	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	X	54777493	54777493	G	-	DEL	ITIH6	ENST00000218436	human	ensembl	74_37	-1	known	frame_shift_del	c.3673	p.L1225fs	1.000	pfam_ITI_HC_C	pfam_VIT,pfam_ITI_HC_C,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH6	HGNC	ENSG00000102313	tier1			33	0	0.00	18	3	14.29
LAMP2	0	genome.wustl.edu	37	X	119573035	119573035	+	Missense_Mutation	SNP	T	T	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	X	119573035	119573035	T	G	SNP	LAMP2	ENST00000371335	human	ensembl	74_37	-1	known	missense	c.1207	p.S403R	1.000	pfam_Lysosome-assoc_membr_glycop	pfam_Lysosome-assoc_membr_glycop,prints_Lysosome-assoc_membr_glycop	-	no_errors	LAMP2	HGNC	ENSG00000005893	tier1	-	-	171	0	0.00	119	18	13.14
LDHAL6CP	0	genome.wustl.edu	37	12	63398421	63398421	+	RNA	SNP	C	C	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	63398421	63398421	C	G	SNP	LDHAL6CP	ENST00000550738	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	LDHAL6CP	HGNC	ENSG00000250517	tier1	-	-	148	0	0.00	106	9	7.83
MAATS1	0	genome.wustl.edu	37	3	119462964	119462964	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	119462964	119462964	G	A	SNP	MAATS1	ENST00000273390	human	ensembl	74_37	+1	known	missense	c.1823	p.R608Q	1.000	NULL	superfamily_S-AdoMet_deCO2ase_core	-	no_errors	MAATS1	HGNC	ENSG00000183833	tier1	-	-	146	0	0.00	118	7	5.60
MAP2K7	0	genome.wustl.edu	37	19	7976189	7976189	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	19	7976189	7976189	G	A	SNP	MAP2K7	ENST00000545011	human	ensembl	74_37	+1	known	missense	c.1036	p.D346N	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K7	HGNC	ENSG00000076984	tier1	-	-	135	0	0.00	73	8	9.88
MAPT	0	genome.wustl.edu	37	17	44087732	44087732	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	17	44087732	44087732	A	-	DEL	MAPT	ENST00000344290	human	ensembl	74_37	+1	known	frame_shift_del	c.1884	p.K629fs	1.000	pfam_MAP_tubulin-bd_rpt	pfam_MAP_tubulin-bd_rpt,prints_Tau	-	no_errors	MAPT	HGNC	ENSG00000186868	tier1			25	0	0.00	7	2	22.22
MARCO	0	genome.wustl.edu	37	2	119750046	119750046	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	2	119750046	119750046	G	T	SNP	MARCO	ENST00000327097	human	ensembl	74_37	+1	known	nonsense	c.1246	p.E416*	0.999	pfam_Collagen	pfam_Collagen,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	MARCO	HGNC	ENSG00000019169	tier1	-	-	74	0	0.00	66	8	10.81
MT-RNR1	0	genome.wustl.edu	37	MT	1289	1289	+	RNA	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	MT	1289	1289	G	A	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459	tier1	-	-	140	0	0.00	130	65	33.33
MUC2	0	genome.wustl.edu	37	11	1092997	1092997	+	Missense_Mutation	SNP	A	A	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	11	1092997	1092997	A	C	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.4816	p.T1606P	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	tier1	rs201261285	-	14	0	0.00	7	3	30.00
NARS2	0	genome.wustl.edu	37	11	78277215	78277215	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	11	78277215	78277215	C	T	SNP	NARS2	ENST00000281038	human	ensembl	74_37	-1	known	missense	c.476	p.R159H	1.000	pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,tigrfam_Asn-tRNA-ligase	pfam_aa-tRNA-synt_II,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,pfscan_aa-tRNA-synth_II,prints_Asp/Asn-tRNA-synth_IIb,tigrfam_Asn-tRNA-ligase	-	no_errors	NARS2	HGNC	ENSG00000137513	tier1	-	-	193	0	0.00	177	14	7.33
NDST1	0	genome.wustl.edu	37	5	149907686	149907686	+	Silent	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	149907686	149907686	C	T	SNP	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	silent	c.834	p.R278	0.453	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614	tier1	-	-	112	0	0.00	78	15	16.13
OR51A7	0	genome.wustl.edu	37	11	4929244	4929244	+	Missense_Mutation	SNP	G	G	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	11	4929244	4929244	G	C	SNP	OR51A7	ENST00000359350	human	ensembl	74_37	+1	known	missense	c.645	p.L215F	0.977	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR51A7	HGNC	ENSG00000176895	tier1	-	-	203	0	0.00	157	12	7.10
OR8G5	0	genome.wustl.edu	37	11	124135668	124135668	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	11	124135668	124135668	G	A	SNP	OR8G5	ENST00000524943	human	ensembl	74_37	+1	known	missense	c.946	p.V316I	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8G5	HGNC	ENSG00000255298	tier1	-	-	118	0	0.00	109	9	7.63
PAPSS2	0	genome.wustl.edu	37	10	89487153	89487153	+	Silent	SNP	T	T	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	10	89487153	89487153	T	C	SNP	PAPSS2	ENST00000456849	human	ensembl	74_37	+1	known	silent	c.993	p.A331	0.965	pfam_Sulfurylase_cat_dom,superfamily_PUA-like_domain,tigrfam_Sulphate_adenylyltransferase	pfam_Sulfurylase_cat_dom,pfam_APS_kinase,superfamily_PUA-like_domain,superfamily_P-loop_NTPase,tigrfam_Sulphate_adenylyltransferase,tigrfam_APS_kinase	-	no_errors	PAPSS2	HGNC	ENSG00000198682	tier1	-	-	112	0	0.00	80	9	10.11
PCDHB13	0	genome.wustl.edu	37	5	140595562	140595562	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	140595562	140595562	G	A	SNP	PCDHB13	ENST00000341948	human	ensembl	74_37	+1	known	missense	c.1867	p.E623K	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC	ENSG00000187372	tier1	-	-	117	0	0.00	83	10	10.75
PCDHB16	0	genome.wustl.edu	37	5	140563345	140563345	+	Missense_Mutation	SNP	T	T	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	140563345	140563345	T	A	SNP	PCDHB16	ENST00000361016	human	ensembl	74_37	+1	known	missense	c.1211	p.V404E	0.912	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963	tier1	-	-	119	0	0.00	83	6	6.74
RAB8A	0	genome.wustl.edu	37	19	16236288	16236288	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	19	16236288	16236288	G	A	SNP	RAB8A	ENST00000300935	human	ensembl	74_37	+1	known	missense	c.255	p.M85I	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB8A	HGNC	ENSG00000167461				52	0	0.00	38	4	9.52
RAPGEF4	0	genome.wustl.edu	37	2	173891417	173891417	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	2	173891417	173891417	G	A	SNP	RAPGEF4	ENST00000397081	human	ensembl	74_37	+1	known	missense	c.2371	p.V791M	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_DEP_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF4	HGNC	ENSG00000091428				144	0	0.00	93	5	5.10
RNASEH2B	0	genome.wustl.edu	37	13	51530586	51530587	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	13	51530586	51530587	-	A	INS	RNASEH2B	ENST00000336617	human	ensembl	74_37	+1	known	frame_shift_ins	c.915_916	p.I308fs	0.023:0.153	NULL	pfam_RNase_H2_suB	-	no_errors	RNASEH2B	HGNC	ENSG00000136104	tier1			39	0	0.00	22	3	12.00
RTN4R	0	genome.wustl.edu	37	22	20230348	20230348	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	22	20230348	20230348	C	T	SNP	RTN4R	ENST00000043402	human	ensembl	74_37	-1	known	missense	c.308	p.G103D	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	RTN4R	HGNC	ENSG00000040608				89	0	0.00	66	4	5.63
SF3A1	0	genome.wustl.edu	37	22	30735202	30735202	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	22	30735202	30735202	G	A	SNP	SF3A1	ENST00000215793	human	ensembl	74_37	-1	known	missense	c.1414	p.R472W	1.000	pfam_PRP21-like	pfam_PRP21-like,pfam_Surp,pfam_Ubiquitin_dom,superfamily_Surp,smart_Surp,smart_Ubiquitin_dom,pfscan_Surp,pfscan_Ubiquitin_supergroup	-	no_errors	SF3A1	HGNC	ENSG00000099995	tier1	-	-	288	0	0.00	230	13	5.35
SLC22A10	0	genome.wustl.edu	37	11	63072236	63072237	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	11	63072236	63072237	0	T	INS	SLC22A10	ENST00000332793	human	ensembl	74_37	+1	known	frame_shift_ins	c.1473_1474	p.T493fs	0.000:0.002	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A10	HGNC	ENSG00000184999				168	0	0.00	132	13	8.97
SLC35G3	0	genome.wustl.edu	37	17	33521058	33521058	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	17	33521058	33521058	C	T	SNP	SLC35G3	ENST00000297307	human	ensembl	74_37	-1	known	missense	c.269	p.R90H	0.985	pfam_DMT	pfam_DMT	-	no_errors	SLC35G3	HGNC	ENSG00000164729	tier1	-	-	355	0	0.00	344	20	5.49
SLC6A15	0	genome.wustl.edu	37	12	85255784	85255784	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	85255784	85255784	G	T	SNP	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	missense	c.1820	p.A607E	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041	tier1	-	-	169	0	0.00	154	11	6.67
TAOK3	0	genome.wustl.edu	37	12	118590080	118590080	+	Silent	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	118590080	118590080	C	T	SNP	TAOK3	ENST00000392533	human	ensembl	74_37	-1	known	silent	c.2487	p.Q829	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK3	HGNC	ENSG00000135090	tier1	-	-	126	0	0.00	90	7	7.22
TBC1D9	0	genome.wustl.edu	37	4	141583252	141583252	+	Missense_Mutation	SNP	T	T	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	4	141583252	141583252	T	C	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	missense	c.1598	p.N533S	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436	tier1	-	-	268	0	0.00	174	22	11.11
TGFBR1	0	genome.wustl.edu	37	9	101911535	101911535	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	9	101911535	101911535	G	A	SNP	TGFBR1	ENST00000374994	human	ensembl	74_37	+1	known	missense	c.1460	p.R487Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,superfamily_Quinolinate_PRibosylTrfase_C,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TGFBR1	HGNC	ENSG00000106799	tier1	rs113605875	-	79	0	0.00	62	7	10.14
TIPIN	0	genome.wustl.edu	37	15	66672145	66672145	+	RNA	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	15	66672145	66672145	C	T	SNP	TIPIN	ENST00000561773	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TIPIN	HGNC	ENSG00000075131	tier1	-	-	101	0	0.00	67	7	9.46
TMF1	0	genome.wustl.edu	37	3	69097357	69097357	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	69097357	69097357	C	T	SNP	TMF1	ENST00000543976	human	ensembl	74_37	-1	known	missense	c.499	p.G167S	0.006	NULL	pfam_TMF_TATA-bd,pfam_TMF_DNA-bd	-	no_errors	TMF1	HGNC	ENSG00000144747	tier1	-	-	355	0	0.00	270	35	11.48
TSHZ1	0	genome.wustl.edu	37	18	72999597	72999597	+	Silent	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	18	72999597	72999597	G	A	SNP	TSHZ1	ENST00000580243	human	ensembl	74_37	+1	known	silent	c.2235	p.P745	0.993	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ1	HGNC	ENSG00000179981				72	0	0.00	70	5	6.67
TUBBP5	0	genome.wustl.edu	37	9	141070994	141070994	+	RNA	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	9	141070994	141070994	G	A	SNP	TUBBP5	ENST00000290377	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TUBBP5	HGNC	ENSG00000159247	tier1	-	-	90	0	0.00	66	8	10.81
VWA2	0	genome.wustl.edu	37	10	116049196	116049196	+	Silent	SNP	T	T	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	10	116049196	116049196	T	G	SNP	VWA2	ENST00000392982	human	ensembl	74_37	+1	known	silent	c.2070	p.A690	0.996	smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_EG-like_dom,pfam_EGF_extracell,smart_VWF_A,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_VWF_A	-	no_errors	VWA2	HGNC	ENSG00000165816	tier1	-	-	139	0	0.00	97	11	10.19
BRINP3	0	genome.wustl.edu	37	1	190195299	190195299	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	1	190195299	190195299	G	T	SNP	BRINP3	ENST00000367462	human	ensembl	74_37	-1	known	missense	c.874	p.P292T	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP3	HGNC	ENSG00000162670				95	0	0	80	5	5.88235
IRF2BP2	0	genome.wustl.edu	37	1	234743031	234743031	+	Missense_Mutation	SNP	T	T	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	1	234743031	234743031	T	C	SNP	IRF2BP2	ENST00000366609	human	ensembl	74_37	-1	novel	missense	c.1616	p.K539R	1.000	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BP2	HGNC	ENSG00000168264				206	0	0	129	11	7.85714
VWA2	0	genome.wustl.edu	37	10	116049196	116049196	+	Silent	SNP	T	T	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	10	116049196	116049196	T	G	SNP	VWA2	ENST00000392982	human	ensembl	74_37	+1	known	silent	c.2070	p.A690	0.996	smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_EG-like_dom,pfam_EGF_extracell,smart_VWF_A,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_VWF_A	-	no_errors	VWA2	HGNC	ENSG00000165816				125	0	0	83	9	9.78261
PAPSS2	0	genome.wustl.edu	37	10	89487153	89487153	+	Silent	SNP	T	T	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	10	89487153	89487153	T	C	SNP	PAPSS2	ENST00000456849	human	ensembl	74_37	+1	known	silent	c.993	p.A331	0.965	pfam_Sulfurylase_cat_dom,superfamily_PUA-like_domain,tigrfam_Sulphate_adenylyltransferase	pfam_Sulfurylase_cat_dom,pfam_APS_kinase,superfamily_PUA-like_domain,superfamily_P-loop_NTPase,tigrfam_Sulphate_adenylyltransferase,tigrfam_APS_kinase	-	no_errors	PAPSS2	HGNC	ENSG00000198682				101	0	0	76	9	10.5882
OR51A7	0	genome.wustl.edu	37	11	4929244	4929244	+	Missense_Mutation	SNP	G	G	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	11	4929244	4929244	G	C	SNP	OR51A7	ENST00000359350	human	ensembl	74_37	+1	known	missense	c.645	p.L215F	0.977	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR51A7	HGNC	ENSG00000176895				181	0	0	140	11	7.28477
NARS2	0	genome.wustl.edu	37	11	78277215	78277215	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	11	78277215	78277215	C	T	SNP	NARS2	ENST00000281038	human	ensembl	74_37	-1	known	missense	c.476	p.R159H	1.000	pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,tigrfam_Asn-tRNA-ligase	pfam_aa-tRNA-synt_II,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,pfscan_aa-tRNA-synth_II,prints_Asp/Asn-tRNA-synth_IIb,tigrfam_Asn-tRNA-ligase	-	no_errors	NARS2	HGNC	ENSG00000137513				169	0	0	154	11	6.66667
C12orf42	0	genome.wustl.edu	37	12	103696092	103696092	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	103696092	103696092	G	A	SNP	C12orf42	ENST00000378113	human	ensembl	74_37	-1	known	missense	c.877	p.R293W	0.000	NULL	NULL	-	no_errors	C12orf42	HGNC	ENSG00000179088				104	0	0	75	7	8.53659
TAOK3	0	genome.wustl.edu	37	12	118590080	118590080	+	Silent	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	118590080	118590080	C	T	SNP	TAOK3	ENST00000392533	human	ensembl	74_37	-1	known	silent	c.2487	p.Q829	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK3	HGNC	ENSG00000135090				115	0	0	78	7	8.23529
ALG10B	0	genome.wustl.edu	37	12	38712112	38712112	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	38712112	38712112	G	T	SNP	ALG10B	ENST00000308742	human	ensembl	74_37	+1	known	missense	c.221	p.G74V	1.000	pfam_Alg10,pirsf_Alg10	pfam_Alg10,pirsf_Alg10	-	no_errors	ALG10B	HGNC	ENSG00000175548				334	0	0	275	21	7.09459
AQP5	0	genome.wustl.edu	37	12	50356011	50356011	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	50356011	50356011	G	A	SNP	AQP5	ENST00000293599	human	ensembl	74_37	+1	known	missense	c.211	p.A71T	0.993	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,prints_Aquaporin_5,tigrfam_MIP	-	no_errors	AQP5	HGNC	ENSG00000161798				59	0	0	61	7	10.2941
SLC6A15	0	genome.wustl.edu	37	12	85255784	85255784	+	Missense_Mutation	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	12	85255784	85255784	G	T	SNP	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	missense	c.1820	p.A607E	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041				154	0	0	137	9	6.16438
CEP170B	0	genome.wustl.edu	37	14	105360623	105360623	+	Missense_Mutation	SNP	A	A	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	14	105360623	105360623	A	G	SNP	CEP170B	ENST00000453495	human	ensembl	74_37	+1	known	missense	c.4381	p.I1461V	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170B	HGNC	ENSG00000099814				88	0	0	65	8	10.9589
AHNAK2	0	genome.wustl.edu	37	14	105407443	105407443	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	14	105407443	105407443	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.14345	p.S4782F	0.003	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				127	0	0	80	5	5.88235
CDH1	0	genome.wustl.edu	37	16	68846036	68846036	+	Splice_Site	SNP	A	A	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	16	68846036	68846036	A	G	SNP	CDH1	ENST00000261769	human	ensembl	74_37	+1	known	splice_site	c.1009-2	e8-2	1.000	-	-	-	no_errors	CDH1	HGNC	ENSG00000039068				127	0	0	78	23	22.7723
MED31	0	genome.wustl.edu	37	17	6554834	6554834	+	Silent	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	17	6554834	6554834	G	T	SNP	MED31	ENST00000225728	human	ensembl	74_37	-1	known	silent	c.15	p.V5	1.000	NULL	pfam_Mediator_Med31	-	no_errors	MED31	HGNC	ENSG00000108590				63	0	0	44	3	6.38298
SENP3	0	genome.wustl.edu	37	17	7468154	7468154	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	17	7468154	7468154	C	T	SNP	SENP3	ENST00000429205	human	ensembl	74_37	+1	known	nonsense	c.928	p.R310*	0.992	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP3	HGNC	ENSG00000161956				80	0	0	48	4	7.69231
TSHZ1	0	genome.wustl.edu	37	18	72999597	72999597	+	Silent	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	18	72999597	72999597	G	A	SNP	TSHZ1	ENST00000580243	human	ensembl	74_37	+1	known	silent	c.2235	p.P745	0.993	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ1	HGNC	ENSG00000179981				64	0	0	63	5	7.35294
RAB8A	0	genome.wustl.edu	37	19	16236288	16236288	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	19	16236288	16236288	G	A	SNP	RAB8A	ENST00000300935	human	ensembl	74_37	+1	known	missense	c.255	p.M85I	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB8A	HGNC	ENSG00000167461				43	0	0	31	4	11.4286
ATP1A3	0	genome.wustl.edu	37	19	42485918	42485918	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	19	42485918	42485918	G	A	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	missense	c.1258	p.R420C	1.000	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A3	HGNC	ENSG00000105409				99	0	0	66	6	8.33333
GRIK5	0	genome.wustl.edu	37	19	42558560	42558560	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	19	42558560	42558560	C	A	SNP	GRIK5	ENST00000301218	human	ensembl	74_37	-1	known	missense	c.968	p.R323L	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK5	HGNC	ENSG00000105737				116	0	0	105	8	7.07965
MAP2K7	0	genome.wustl.edu	37	19	7976189	7976189	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	19	7976189	7976189	G	A	SNP	MAP2K7	ENST00000545011	human	ensembl	74_37	+1	known	missense	c.1036	p.D346N	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K7	HGNC	ENSG00000076984				114	0	0	66	7	9.58904
MARCO	0	genome.wustl.edu	37	2	119750046	119750046	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	2	119750046	119750046	G	T	SNP	MARCO	ENST00000327097	human	ensembl	74_37	+1	known	nonsense	c.1246	p.E416*	0.999	pfam_Collagen	pfam_Collagen,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	MARCO	HGNC	ENSG00000019169				69	0	0	57	7	10.9375
RAPGEF4	0	genome.wustl.edu	37	2	173891417	173891417	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	2	173891417	173891417	G	A	SNP	RAPGEF4	ENST00000397081	human	ensembl	74_37	+1	known	missense	c.2371	p.V791M	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_DEP_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF4	HGNC	ENSG00000091428				126	0	0	86	5	5.49451
ADCY3	0	genome.wustl.edu	37	2	25141530	25141530	+	Silent	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	2	25141530	25141530	G	A	SNP	ADCY3	ENST00000260600	human	ensembl	74_37	-1	known	silent	c.327	p.A109	0.009	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY3	HGNC	ENSG00000138031				137	0	0	81	5	5.81395
CECR2	0	genome.wustl.edu	37	22	18022583	18022583	+	Silent	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	22	18022583	18022583	G	A	SNP	CECR2	ENST00000400573	human	ensembl	74_37	+1	novel	silent	c.2685	p.P895	0.787	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	CECR2	HGNC	ENSG00000099954				159	0	0	124	11	8.14815
SF3A1	0	genome.wustl.edu	37	22	30735202	30735202	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	22	30735202	30735202	G	A	SNP	SF3A1	ENST00000215793	human	ensembl	74_37	-1	known	missense	c.1414	p.R472W	1.000	pfam_PRP21-like	pfam_PRP21-like,pfam_Surp,pfam_Ubiquitin_dom,superfamily_Surp,smart_Surp,smart_Ubiquitin_dom,pfscan_Surp,pfscan_Ubiquitin_supergroup	-	no_errors	SF3A1	HGNC	ENSG00000099995				254	0	0	201	12	5.6338
MAATS1	0	genome.wustl.edu	37	3	119462964	119462964	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	119462964	119462964	G	A	SNP	MAATS1	ENST00000273390	human	ensembl	74_37	+1	known	missense	c.1823	p.R608Q	1.000	NULL	superfamily_S-AdoMet_deCO2ase_core	-	no_errors	MAATS1	HGNC	ENSG00000183833				129	0	0	103	6	5.50459
IQSEC1	0	genome.wustl.edu	37	3	12977737	12977737	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	12977737	12977737	G	A	SNP	IQSEC1	ENST00000273221	human	ensembl	74_37	-1	known	missense	c.821	p.A274V	0.001	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC1	HGNC	ENSG00000144711				152	0	0	101	13	11.4035
DLG1	0	genome.wustl.edu	37	3	196842799	196842799	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	196842799	196842799	G	T	SNP	DLG1	ENST00000346964	human	ensembl	74_37	-1	known	nonsense	c.1541	p.S514*	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ	pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_MAGUK_PEST_N,pfam_L27_1,pfam_PDZ_assoc,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG1	HGNC	ENSG00000075711				93	0	0	79	9	10.2273
NEK10	0	genome.wustl.edu	37	3	27173450	27173450	+	Missense_Mutation	SNP	C	C	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	27173450	27173450	C	A	SNP	NEK10	ENST00000383771	human	ensembl	74_37	-1	known	missense	c.1079	p.R360I	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	-	no_errors	NEK10	HGNC	ENSG00000163491				66	0	0	50	4	7.40741
TMF1	0	genome.wustl.edu	37	3	69097357	69097357	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	3	69097357	69097357	C	T	SNP	TMF1	ENST00000543976	human	ensembl	74_37	-1	known	missense	c.499	p.G167S	0.006	NULL	pfam_TMF_TATA-bd,pfam_TMF_DNA-bd	-	no_errors	TMF1	HGNC	ENSG00000144747				314	0	0	237	28	10.566
TBC1D9	0	genome.wustl.edu	37	4	141583252	141583252	+	Missense_Mutation	SNP	T	T	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	4	141583252	141583252	T	C	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	missense	c.1598	p.N533S	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436				228	0	0	155	19	10.9195
GABRA4	0	genome.wustl.edu	37	4	46930295	46930295	+	Missense_Mutation	SNP	A	A	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	4	46930295	46930295	A	C	SNP	GABRA4	ENST00000264318	human	ensembl	74_37	-1	known	missense	c.1612	p.W538G	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABBAa4_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA4	HGNC	ENSG00000109158				111	0	0	91	7	7.14286
EVC	0	genome.wustl.edu	37	4	5749976	5749976	+	Silent	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	4	5749976	5749976	G	A	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	silent	c.1041	p.T347	0.000	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840				78	0	0	56	5	8.19672
PCDHB4	0	genome.wustl.edu	37	5	140502531	140502531	+	Missense_Mutation	SNP	A	A	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	140502531	140502531	A	C	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	missense	c.951	p.E317D	0.012	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818				328	0	0	226	13	5.43933
PCDHB16	0	genome.wustl.edu	37	5	140563345	140563345	+	Missense_Mutation	SNP	T	T	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	140563345	140563345	T	A	SNP	PCDHB16	ENST00000361016	human	ensembl	74_37	+1	known	missense	c.1211	p.V404E	0.912	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963				114	0	0	79	6	7.05882
RNF14	0	genome.wustl.edu	37	5	141353170	141353170	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	141353170	141353170	G	A	SNP	RNF14	ENST00000347642	human	ensembl	74_37	+1	known	missense	c.17	p.R6Q	0.998	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD	pfam_RWD-domain,pfam_Znf_C6HC,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,smart_Znf_C6HC,pfscan_RWD-domain,pfscan_Znf_RING	-	no_errors	RNF14	HGNC	ENSG00000013561				146	0	0	100	6	5.66038
NDST1	0	genome.wustl.edu	37	5	149907686	149907686	+	Silent	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	149907686	149907686	C	T	SNP	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	silent	c.834	p.R278	0.453	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614				104	0	0	72	14	16.2791
GRM6	0	genome.wustl.edu	37	5	178413683	178413683	+	Silent	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	178413683	178413683	C	T	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	silent	c.1572	p.P524	0.011	pfam_GPCR_3_9-Cys_dom	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262				84	0	0	73	7	8.75
CDH9	0	genome.wustl.edu	37	5	26902673	26902673	+	Missense_Mutation	SNP	A	A	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	5	26902673	26902673	A	C	SNP	CDH9	ENST00000231021	human	ensembl	74_37	-1	known	missense	c.1165	p.L389V	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100				109	0	0	101	9	8.18182
CCT6P1	0	genome.wustl.edu	37	7	65222986	65222986	+	RNA	SNP	G	G	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	7	65222986	65222986	G	T	SNP	CCT6P1	ENST00000442266	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	CCT6P1	HGNC	ENSG00000228409				20	0	0	16	3	15.7895
TGFBR1	0	genome.wustl.edu	37	9	101911535	101911535	+	Missense_Mutation	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	9	101911535	101911535	G	A	SNP	TGFBR1	ENST00000374994	human	ensembl	74_37	+1	known	missense	c.1460	p.R487Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,superfamily_Quinolinate_PRibosylTrfase_C,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TGFBR1	HGNC	ENSG00000106799				73	0	0	56	7	11.1111
FRMPD3	0	genome.wustl.edu	37	X	106845698	106845698	+	Missense_Mutation	SNP	C	C	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	X	106845698	106845698	C	T	SNP	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	missense	c.4528	p.R1510W	0.995	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234				178	0	0	121	9	6.92308
LAMP2	0	genome.wustl.edu	37	X	119573035	119573035	+	Missense_Mutation	SNP	T	T	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	X	119573035	119573035	T	G	SNP	LAMP2	ENST00000371335	human	ensembl	74_37	-1	known	missense	c.1207	p.S403R	1.000	pfam_Lysosome-assoc_membr_glycop	pfam_Lysosome-assoc_membr_glycop,prints_Lysosome-assoc_membr_glycop	-	no_errors	LAMP2	HGNC	ENSG00000005893				155	0	0	103	17	14.1667
L1CAM	0	genome.wustl.edu	37	X	153136336	153136336	+	Silent	SNP	G	G	A			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	X	153136336	153136336	G	A	SNP	L1CAM	ENST00000543994	human	ensembl	74_37	-1	known	silent	c.609	p.S203	0.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	L1CAM	HGNC	ENSG00000198910				181	0	0	138	10	6.75676
SSX5	0	genome.wustl.edu	37	X	48054780	48054780	+	Silent	SNP	A	A	G			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	X	48054780	48054780	A	G	SNP	SSX5	ENST00000311798	human	ensembl	74_37	-1	known	silent	c.15	p.D5	0.000	NULL	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX5	HGNC	ENSG00000165583				300	1	0.332226	215	25	10.4167
DIAPH2	0	genome.wustl.edu	37	X	96638969	96638969	+	Missense_Mutation	SNP	T	T	C			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	X	96638969	96638969	T	C	SNP	DIAPH2	ENST00000324765	human	ensembl	74_37	+1	known	missense	c.3071	p.L1024P	0.997	smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH2	HGNC	ENSG00000147202				66	0	0	51	4	7.27273
SLC22A10	0	genome.wustl.edu	37	11	63072236	63072237	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D7-A748-01A-12D-A32N-08	TCGA-D7-A748-10A-21D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2b9889ab-881d-4a5e-9d54-512baf918ea7	89dc5161-ca99-4535-9aca-a4e2997d7677	11	63072236	63072237	-	T	INS	SLC22A10	ENST00000332793	human	ensembl	74_37	+1	known	frame_shift_ins	c.1473_1474	p.T493fs	0.000:0.002	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A10	HGNC	ENSG00000184999				165	0	0	131	14	9.65517
