Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
DBT	0	genome.wustl.edu	37	1	100696418	100696418	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	100696418	100696418	G	T	SNP	DBT	ENST00000370132	human	ensembl	74_37	-1	known	missense	c.304	p.Q102K	1.000	pfam_Biotin_lipoyl,superfamily_Single_hybrid_motif,pfscan_Biotin_lipoyl	pfam_2-oxoacid_DH_actylTfrase,pfam_Biotin_lipoyl,pfam_E3-bd,superfamily_Single_hybrid_motif,superfamily_E3-bd,pfscan_Biotin_lipoyl	-	no_errors	DBT	HGNC	ENSG00000137992				126	1	0.787402	35	9	20.4545
COL11A1	0	genome.wustl.edu	37	1	103348865	103348865	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	103348865	103348865	C	T	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.4897	p.E1633K	1.000	pfam_Fib_collagen_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fib_collagen_C	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				124	0	0	39	8	17.0213
COL11A1	0	genome.wustl.edu	37	1	103480076	103480076	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	103480076	103480076	C	A	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.1599	p.Q533H	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				92	0	0	20	11	35.4839
SLC22A15	0	genome.wustl.edu	37	1	116534717	116534717	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	116534717	116534717	C	T	SNP	SLC22A15	ENST00000369503	human	ensembl	74_37	+1	known	silent	c.153	p.D51	1.000	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A15	HGNC	ENSG00000163393				60	0	0	29	6	17.1429
PHGDH	0	genome.wustl.edu	37	1	120278013	120278013	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	120278013	120278013	C	T	SNP	PHGDH	ENST00000369409	human	ensembl	74_37	+1	known	missense	c.739	p.R247W	0.982	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,tigrfam_D-3-Phosphoglycerate_DH	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,tigrfam_D-3-Phosphoglycerate_DH	-	no_errors	PHGDH	HGNC	ENSG00000092621				146	0	0	78	15	16.129
MFN2	0	genome.wustl.edu	37	1	12065913	12065913	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	12065913	12065913	C	T	SNP	MFN2	ENST00000235329	human	ensembl	74_37	+1	known	silent	c.1641	p.L547	0.083	superfamily_P-loop_NTPase	pfam_Fzo/mitofusin_HR2,pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	MFN2	HGNC	ENSG00000116688				293	0	0	129	69	34.8485
LOC101927345	0	genome.wustl.edu	37	1	143378100	143378100	+	RNA	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	143378100	143378100	G	T	SNP	LOC101927345	ENST00000428624	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.197	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261				103	0	0	24	9	27.2727
TUFT1	0	genome.wustl.edu	37	1	151536460	151536460	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	151536460	151536460	C	T	SNP	TUFT1	ENST00000538902	human	ensembl	74_37	+1	known	silent	c.375	p.I125	1.000	NULL	superfamily_Prefoldin	-	no_errors	TUFT1	HGNC	ENSG00000143367				104	0	0	62	29	31.8681
FLG2	0	genome.wustl.edu	37	1	152328723	152328723	+	Silent	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	152328723	152328723	T	C	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	silent	c.1539	p.G513	0.204	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520				562	0	0	443	34	7.12788
PMVK	0	genome.wustl.edu	37	1	154898954	154898954	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	154898954	154898954	C	T	SNP	PMVK	ENST00000368467	human	ensembl	74_37	-1	known	silent	c.318	p.V106	1.000	pfam_Pmev_kin_anim,superfamily_P-loop_NTPase,pirsf_Pmev_kin_anim,tigrfam_Pmev_kin_anim	pfam_Pmev_kin_anim,superfamily_P-loop_NTPase,pirsf_Pmev_kin_anim,tigrfam_Pmev_kin_anim	-	no_errors	PMVK	HGNC	ENSG00000163344				75	0	0	64	5	7.24638
SPTA1	0	genome.wustl.edu	37	1	158632694	158632694	+	Silent	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	158632694	158632694	T	C	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	silent	c.2262	p.E754	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				101	0	0	55	15	21.4286
OR6N1	0	genome.wustl.edu	37	1	158735928	158735928	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	158735928	158735928	G	A	SNP	OR6N1	ENST00000335094	human	ensembl	74_37	-1	known	missense	c.545	p.P182L	0.833	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6N1	HGNC	ENSG00000197403				217	0	0	182	15	7.61421
ATP1A2	0	genome.wustl.edu	37	1	160109759	160109759	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	160109759	160109759	C	T	SNP	ATP1A2	ENST00000361216	human	ensembl	74_37	+1	known	missense	c.3019	p.R1007W	0.997	tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A2	HGNC	ENSG00000018625				152	0	0	120	17	12.4088
NR1I3	0	genome.wustl.edu	37	1	161199656	161199656	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	161199656	161199656	G	A	SNP	NR1I3	ENST00000367979	human	ensembl	74_37	-1	known	silent	c.1005	p.Y335	0.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,prints_Str_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR1I3	HGNC	ENSG00000143257				109	0	0	68	8	10.5263
FMO3	0	genome.wustl.edu	37	1	171083449	171083449	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	171083449	171083449	C	A	SNP	FMO3	ENST00000367755	human	ensembl	74_37	+1	known	missense	c.1130	p.A377D	0.919	pfam_Flavin_mOase-like,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_3,prints_Flavin_mOase_1,prints_Flavin_mOase_2	-	no_errors	FMO3	HGNC	ENSG00000007933				69	0	0	42	4	8.69565
FMO2	0	genome.wustl.edu	37	1	171176834	171176834	+	RNA	SNP	C	C	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	171176834	171176834	C	G	SNP	FMO2	ENST00000488431	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FMO2	HGNC	ENSG00000094963				88	0	0	55	7	11.2903
MYOC	0	genome.wustl.edu	37	1	171621299	171621299	+	Silent	SNP	A	A	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	171621299	171621299	A	T	SNP	MYOC	ENST00000037502	human	ensembl	74_37	-1	known	silent	c.453	p.V151	0.000	NULL	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	MYOC	HGNC	ENSG00000034971				399	0	0	220	142	39.2265
CR2	0	genome.wustl.edu	37	1	207646324	207646324	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	207646324	207646324	G	A	SNP	CR2	ENST00000367057	human	ensembl	74_37	+1	known	missense	c.1778	p.C593Y	0.400	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322				101	0	0	89	11	11
ALPL	0	genome.wustl.edu	37	1	21903107	21903107	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	21903107	21903107	C	T	SNP	ALPL	ENST00000374832	human	ensembl	74_37	+1	known	nonsense	c.1282	p.R428*	0.977	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPL	HGNC	ENSG00000162551				216	0	0	78	37	32.1739
HLX	0	genome.wustl.edu	37	1	221053383	221053383	+	Nonsense_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	221053383	221053383	G	T	SNP	HLX	ENST00000366903	human	ensembl	74_37	+1	known	nonsense	c.184	p.E62*	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	HLX	HGNC	ENSG00000136630				28	0	0	15	17	53.125
DISC1	0	genome.wustl.edu	37	1	231906801	231906801	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	231906801	231906801	C	T	SNP	DISC1	ENST00000439617	human	ensembl	74_37	+1	known	missense	c.1619	p.P540L	0.956	superfamily_Prefoldin	superfamily_Prefoldin	-	no_errors	DISC1	HGNC	ENSG00000162946				26	0	0	22	6	21.4286
RYR2	0	genome.wustl.edu	37	1	237947931	237947931	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	237947931	237947931	C	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.12937	p.R4313C	0.015	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				114	0	0	60	25	29.4118
OR1C1	0	genome.wustl.edu	37	1	247920903	247920903	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	247920903	247920903	T	C	SNP	OR1C1	ENST00000408896	human	ensembl	74_37	-1	known	missense	c.806	p.E269G	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1C1	HGNC	ENSG00000221888				132	0	0	51	12	19.0476
SMAP2	0	genome.wustl.edu	37	1	40872476	40872476	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	40872476	40872476	C	A	SNP	SMAP2	ENST00000372718	human	ensembl	74_37	+1	known	missense	c.172	p.L58M	1.000	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	SMAP2	HGNC	ENSG00000084070				141	0	0	49	28	36.3636
NSUN4	0	genome.wustl.edu	37	1	46827504	46827504	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	46827504	46827504	C	T	SNP	NSUN4	ENST00000474844	human	ensembl	74_37	+1	known	missense	c.1141	p.R381C	0.560	NULL	pfam_Fmu/NOL1/Nop2p,prints_RCMT	-	no_errors	NSUN4	HGNC	ENSG00000117481				59	0	0	22	9	29.0323
RPL22	0	genome.wustl.edu	37	1	6257728	6257728	+	Missense_Mutation	SNP	A	A	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	6257728	6257728	A	C	SNP	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	missense	c.101	p.M34R	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251				55	0	0	19	3	13.6364
CTH	0	genome.wustl.edu	37	1	70900789	70900789	+	RNA	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	70900789	70900789	C	A	SNP	CTH	ENST00000482383	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTH	HGNC	ENSG00000116761				27	0	0	10	2	16.6667
TTLL7	0	genome.wustl.edu	37	1	84348736	84348736	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	84348736	84348736	A	G	SNP	TTLL7	ENST00000260505	human	ensembl	74_37	-1	known	missense	c.2453	p.L818P	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL7	HGNC	ENSG00000137941				247	0	0	102	22	17.7419
AGRN	0	genome.wustl.edu	37	1	981547	981547	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	981547	981547	G	A	SNP	AGRN	ENST00000379370	human	ensembl	74_37	+1	known	missense	c.2813	p.G938E	1.000	pfam_Kazal_dom,smart_FacI_MAC,smart_EG-like_dom,smart_Kazal_dom	pfam_Laminin_G,pfam_Agrin_NtA,pfam_Kazal_dom,pfam_EGF_laminin,pfam_SEA_dom,pfam_EG-like_dom,superfamily_TIMP-like_OB-fold,superfamily_ConA-like_lec_gl_sf,smart_FacI_MAC,smart_Fol_N,smart_Kazal_dom,smart_EG-like_dom,smart_EGF_laminin,smart_SEA_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Agrin_NtA,pfscan_SEA_dom	-	no_errors	AGRN	HGNC	ENSG00000188157				261	0	0	163	18	9.94475
MCM10	0	genome.wustl.edu	37	10	13251159	13251159	+	Nonstop_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	10	13251159	13251159	G	T	SNP	MCM10	ENST00000378694	human	ensembl	74_37	+1	known	nonstop	c.2567	p.*856L	0.000	NULL	pfam_Rep_factor_Mcm10,pfam_Znf_Mcm10/DnaG	-	no_errors	MCM10	HGNC	ENSG00000065328				144	0	0	113	13	10.3175
TUBGCP2	0	genome.wustl.edu	37	10	135094780	135094780	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	10	135094780	135094780	G	A	SNP	TUBGCP2	ENST00000543663	human	ensembl	74_37	-1	known	missense	c.2654	p.S885F	1.000	NULL	pfam_TUBGCP,superfamily_Ocr	-	no_errors	TUBGCP2	HGNC	ENSG00000130640				99	0	0	67	10	12.987
ZFAND4	0	genome.wustl.edu	37	10	46121821	46121821	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	10	46121821	46121821	G	A	SNP	ZFAND4	ENST00000344646	human	ensembl	74_37	-1	known	missense	c.1450	p.H484Y	0.024	NULL	pfam_Ubiquitin_dom,pfam_Znf_AN1,smart_Ubiquitin_dom,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	ZFAND4	HGNC	ENSG00000172671				241	0	0	90	24	21.0526
ENSG00000224251	0	genome.wustl.edu	37	10	5038105	5038105	+	RNA	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	10	5038105	5038105	T	C	SNP	ENSG00000224251	ENST00000440414	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-499O7.7	Clone_based_vega_gene	ENSG00000224251				13	0	0	1	5	83.3333
SFMBT2	0	genome.wustl.edu	37	10	7327907	7327907	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	10	7327907	7327907	T	C	SNP	SFMBT2	ENST00000361972	human	ensembl	74_37	-1	known	missense	c.446	p.E149G	1.000	pfam_Mbt	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_Pointed_dom,superfamily_SAM/pointed,superfamily_ARM-type_fold,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT2	HGNC	ENSG00000198879				296	0	0	204	86	29.6552
DYNC2H1	0	genome.wustl.edu	37	11	103157000	103157000	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	103157000	103157000	T	C	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.10928	p.L3643P	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240				402	0	0	192	54	21.9512
ZBTB16	0	genome.wustl.edu	37	11	113934125	113934125	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	113934125	113934125	G	A	SNP	ZBTB16	ENST00000335953	human	ensembl	74_37	+1	known	missense	c.103	p.D35N	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB16	HGNC	ENSG00000109906				88	0	0	69	10	12.6582
NXPE4	0	genome.wustl.edu	37	11	114441753	114441753	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	114441753	114441753	C	A	SNP	NXPE4	ENST00000375478	human	ensembl	74_37	-1	known	missense	c.1542	p.W514C	1.000	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE4	HGNC	ENSG00000137634				146	0	0	60	6	9.09091
SIDT2	0	genome.wustl.edu	37	11	117053270	117053270	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	117053270	117053270	G	A	SNP	SIDT2	ENST00000278951	human	ensembl	74_37	+1	known	silent	c.552	p.S184	0.093	NULL	NULL	-	no_errors	SIDT2	HGNC	ENSG00000149577				152	0	0	66	63	48.8372
SIAE	0	genome.wustl.edu	37	11	124508510	124508510	+	Silent	SNP	A	A	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	124508510	124508510	A	C	SNP	SIAE	ENST00000263593	human	ensembl	74_37	-1	known	silent	c.1248	p.A416	0.000	NULL	pfam_DUF303_acetylest	-	no_errors	SIAE	HGNC	ENSG00000110013				86	0	0	56	4	6.66667
MUC5B	0	genome.wustl.edu	37	11	1268887	1268887	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	1268887	1268887	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.10786	p.G3596R	0.025	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				125	0	0	36	85	70.2479
FLI1	0	genome.wustl.edu	37	11	128628065	128628065	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	128628065	128628065	C	T	SNP	FLI1	ENST00000527786	human	ensembl	74_37	+1	known	missense	c.74	p.A25V	1.000	NULL	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	FLI1	HGNC	ENSG00000151702				46	0	0	36	8	18.1818
PLEKHA7	0	genome.wustl.edu	37	11	16816468	16816468	+	Missense_Mutation	SNP	A	A	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	16816468	16816468	A	C	SNP	PLEKHA7	ENST00000448080	human	ensembl	74_37	-1	known	missense	c.2507	p.V836G	0.990	NULL	pfam_Pleckstrin_homology,pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA7	HGNC	ENSG00000166689				235	0	0	72	68	48.5714
ANO3	0	genome.wustl.edu	37	11	26681809	26681809	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	26681809	26681809	C	T	SNP	ANO3	ENST00000256737	human	ensembl	74_37	+1	known	missense	c.2764	p.H922Y	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO3	HGNC	ENSG00000134343				143	0	0	86	7	7.52688
ACCSL	0	genome.wustl.edu	37	11	44069983	44069983	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	44069983	44069983	C	T	SNP	ACCSL	ENST00000378832	human	ensembl	74_37	+1	known	missense	c.397	p.R133C	0.000	NULL	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	ACCSL	HGNC	ENSG00000205126				172	0	0	101	12	10.6195
ARHGAP1	0	genome.wustl.edu	37	11	46702069	46702069	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	46702069	46702069	A	G	SNP	ARHGAP1	ENST00000311956	human	ensembl	74_37	-1	known	missense	c.788	p.L263P	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_CRAL-TRIO_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_RhoGAP_dom,pfscan_CRAL-TRIO_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP1	HGNC	ENSG00000175220				124	0	0	94	7	6.93069
LRP4	0	genome.wustl.edu	37	11	46896499	46896499	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	46896499	46896499	G	A	SNP	LRP4	ENST00000378623	human	ensembl	74_37	-1	known	missense	c.4081	p.R1361C	1.000	NULL	pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP4	HGNC	ENSG00000134569				128	0	0	45	36	44.4444
MADD	0	genome.wustl.edu	37	11	47306680	47306680	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	47306680	47306680	G	A	SNP	MADD	ENST00000311027	human	ensembl	74_37	+1	known	silent	c.2346	p.E782	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514				101	0	0	70	23	24.7312
ESRRA	0	genome.wustl.edu	37	11	64082312	64082312	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	64082312	64082312	C	T	SNP	ESRRA	ENST00000000442	human	ensembl	74_37	+1	known	missense	c.671	p.A224V	0.963	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESRRA	HGNC	ENSG00000173153				102	0	0	77	5	6.09756
BRMS1	0	genome.wustl.edu	37	11	66107615	66107615	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	66107615	66107615	C	G	SNP	BRMS1	ENST00000425825	human	ensembl	74_37	-1	known	missense	c.605	p.R202T	1.000	pfam_Sds3	pfam_Sds3	-	no_errors	BRMS1	HGNC	ENSG00000174744				93	0	0	18	60	76.9231
ANO1	0	genome.wustl.edu	37	11	69999183	69999183	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	69999183	69999183	C	T	SNP	ANO1	ENST00000355303	human	ensembl	74_37	+1	known	silent	c.1374	p.Y458	0.614	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO1	HGNC	ENSG00000131620				24	0	0	17	8	32
NAALAD2	0	genome.wustl.edu	37	11	89882277	89882277	+	Splice_Site	SNP	T	T	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	89882277	89882277	T	G	SNP	NAALAD2	ENST00000534061	human	ensembl	74_37	+1	known	splice_site	c.483+2	e4+2	1.000	-	-	-	no_errors	NAALAD2	HGNC	ENSG00000077616				143	0	0	64	11	14.6667
MED17	0	genome.wustl.edu	37	11	93529609	93529609	+	Nonsense_Mutation	SNP	C	C	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	93529609	93529609	C	G	SNP	MED17	ENST00000251871	human	ensembl	74_37	+1	known	nonsense	c.1046	p.S349*	1.000	pfam_Mediator_Med17	pfam_Mediator_Med17	-	no_errors	MED17	HGNC	ENSG00000042429				150	0	0	70	8	10.2564
KDM4D	0	genome.wustl.edu	37	11	94731530	94731530	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	11	94731530	94731530	C	G	SNP	KDM4D	ENST00000335080	human	ensembl	74_37	+1	known	missense	c.994	p.R332G	1.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,smart_TF_JmjN,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4D	HGNC	ENSG00000186280				110	0	0	98	7	6.66667
TRPV4	0	genome.wustl.edu	37	12	110222176	110222176	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	110222176	110222176	C	T	SNP	TRPV4	ENST00000261740	human	ensembl	74_37	-1	known	silent	c.2403	p.K801	1.000	tigrfam_TRP_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,prints_TRPV4_channel,tigrfam_TRP_channel	-	no_errors	TRPV4	HGNC	ENSG00000111199				231	0	0	123	17	12.1429
SH2B3	0	genome.wustl.edu	37	12	111884621	111884621	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	111884621	111884621	T	C	SNP	SH2B3	ENST00000341259	human	ensembl	74_37	+1	putative	missense	c.797	p.L266P	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology	pfam_Phe_ZIP,pfam_SH2,pfam_Pleckstrin_homology,superfamily_Phe_ZIP,smart_Pleckstrin_homology,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SH2B3	HGNC	ENSG00000111252				40	0	0	24	11	31.4286
TAS2R46	0	genome.wustl.edu	37	12	11214893	11214893	+	Missense_Mutation	SNP	T	T	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	11214893	11214893	T	G	SNP	TAS2R46	ENST00000533467	human	ensembl	74_37	-1	known	missense	c.1	p.M1L	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R46	HGNC	ENSG00000226761				58	0	0	23	5	17.8571
NCOR2	0	genome.wustl.edu	37	12	124846808	124846808	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	124846808	124846808	G	A	SNP	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	silent	c.2961	p.D987	0.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498				41	0	0	8	14	63.6364
AAAS	0	genome.wustl.edu	37	12	53701473	53701473	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	53701473	53701473	G	A	SNP	AAAS	ENST00000209873	human	ensembl	74_37	-1	known	missense	c.1441	p.H481Y	1.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AAAS	HGNC	ENSG00000094914				271	0	0	146	14	8.75
ERBB3	0	genome.wustl.edu	37	12	56493687	56493687	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	56493687	56493687	G	C	SNP	ERBB3	ENST00000267101	human	ensembl	74_37	+1	known	missense	c.3003	p.E1001D	0.994	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Furin-like_Cys-rich_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB3	HGNC	ENSG00000065361				236	0	0	106	44	29.3333
AGAP2	0	genome.wustl.edu	37	12	58128428	58128428	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	58128428	58128428	G	A	SNP	AGAP2	ENST00000547588	human	ensembl	74_37	-1	known	missense	c.1262	p.S421L	0.995	pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP2	HGNC	ENSG00000135439				362	0	0	209	23	9.91379
AVPR1A	0	genome.wustl.edu	37	12	63544532	63544532	+	Missense_Mutation	SNP	T	T	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	63544532	63544532	T	G	SNP	AVPR1A	ENST00000299178	human	ensembl	74_37	-1	known	missense	c.85	p.S29R	0.142	prints_Vprs_V1A_rcpt	pfam_GPCR_Rhodpsn,pfam_DUF1856,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_V1A_rcpt,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	-	no_errors	AVPR1A	HGNC	ENSG00000166148				95	0	0	61	10	14.0845
RPS11P6	0	genome.wustl.edu	37	12	64790499	64790499	+	RNA	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	64790499	64790499	C	T	SNP	RPS11P6	ENST00000482431	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPS11P6	HGNC	ENSG00000243024				15	0	0	3	8	72.7273
PLEKHG7	0	genome.wustl.edu	37	12	93150138	93150138	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	93150138	93150138	T	C	SNP	PLEKHG7	ENST00000344636	human	ensembl	74_37	+1	known	missense	c.671	p.L224P	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG7	HGNC	ENSG00000187510				122	0	0	41	3	6.81818
ITGBL1	0	genome.wustl.edu	37	13	102345019	102345019	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	13	102345019	102345019	G	A	SNP	ITGBL1	ENST00000376180	human	ensembl	74_37	+1	known	missense	c.1100	p.R367H	0.999	smart_EG-like_dom	pfam_EGF_extracell,smart_EG-like_dom	-	no_errors	ITGBL1	HGNC	ENSG00000198542				191	0	0	87	41	32.0312
TUBGCP3	0	genome.wustl.edu	37	13	113153436	113153436	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	13	113153436	113153436	C	T	SNP	TUBGCP3	ENST00000261965	human	ensembl	74_37	-1	known	missense	c.2371	p.A791T	0.988	NULL	pfam_TUBGCP	-	no_errors	TUBGCP3	HGNC	ENSG00000126216				72	0	0	36	6	14.2857
TPTE2	0	genome.wustl.edu	37	13	20041372	20041372	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	13	20041372	20041372	T	C	SNP	TPTE2	ENST00000382977	human	ensembl	74_37	-1	known	missense	c.505	p.I169V	0.101	pfam_Ion_trans_dom	pfam_Tensin_phosphatase_C2-dom,pfam_Ion_trans_dom,pfam_Dual-sp_phosphatase_cat-dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE2	HGNC	ENSG00000132958				90	0	0	35	11	23.913
XPO4	0	genome.wustl.edu	37	13	21401231	21401231	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	13	21401231	21401231	C	A	SNP	XPO4	ENST00000255305	human	ensembl	74_37	-1	known	missense	c.815	p.S272I	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	XPO4	HGNC	ENSG00000132953				134	0	0	75	11	12.7907
DCLK1	0	genome.wustl.edu	37	13	36379912	36379912	+	Missense_Mutation	SNP	A	A	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	13	36379912	36379912	A	T	SNP	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	missense	c.1868	p.L623H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083				179	0	0	69	32	31.6832
DCLK1	0	genome.wustl.edu	37	13	36686318	36686318	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	13	36686318	36686318	G	C	SNP	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	missense	c.411	p.F137L	1.000	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083				110	0	0	68	7	9.33333
VPS36	0	genome.wustl.edu	37	13	52991205	52991205	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	13	52991205	52991205	G	A	SNP	VPS36	ENST00000378060	human	ensembl	74_37	-1	known	missense	c.977	p.S326L	1.000	pfam_EAP30	pfam_EAP30,pfam_VPS36_GLUE	-	no_errors	VPS36	HGNC	ENSG00000136100				60	0	0	27	6	18.1818
CDC42BPB	0	genome.wustl.edu	37	14	103429456	103429456	+	Missense_Mutation	SNP	T	T	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	14	103429456	103429456	T	A	SNP	CDC42BPB	ENST00000361246	human	ensembl	74_37	-1	known	missense	c.2763	p.L921F	0.670	pfam_Myotonic_dystrophy_kinase_coil	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	CDC42BPB	HGNC	ENSG00000198752				65	0	0	21	6	22.2222
OR4N2	0	genome.wustl.edu	37	14	20296061	20296061	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	14	20296061	20296061	G	A	SNP	OR4N2	ENST00000315947	human	ensembl	74_37	+1	known	missense	c.454	p.G152S	0.018	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N2	HGNC	ENSG00000176294				563	0	0	311	32	9.32945
MYH7	0	genome.wustl.edu	37	14	23887594	23887594	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	14	23887594	23887594	C	T	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.3994	p.A1332T	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054				81	0	0	37	13	26
TC2N	0	genome.wustl.edu	37	14	92258735	92258735	+	Silent	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	14	92258735	92258735	A	G	SNP	TC2N	ENST00000340892	human	ensembl	74_37	-1	known	silent	c.1023	p.D341	0.830	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	TC2N	HGNC	ENSG00000165929				172	0	0	40	15	27.2727
SNORD115-2	0	genome.wustl.edu	37	15	25417846	25417846	+	RNA	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	15	25417846	25417846	A	G	SNP	SNORD115-2	ENST00000362842	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.878	-	-	-	no_errors	SNORD115-2	HGNC	ENSG00000199712				482	0	0	223	15	6.30252
TGM7	0	genome.wustl.edu	37	15	43572146	43572146	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	15	43572146	43572146	G	T	SNP	TGM7	ENST00000452443	human	ensembl	74_37	-1	known	missense	c.1355	p.S452Y	0.983	NULL	pfam_Transglutaminase_N,pfam_Transglutaminase_C,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM7	HGNC	ENSG00000159495				133	0	0	57	17	22.973
ATP8B4	0	genome.wustl.edu	37	15	50339641	50339641	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	15	50339641	50339641	C	T	SNP	ATP8B4	ENST00000284509	human	ensembl	74_37	-1	known	silent	c.108	p.S36	0.999	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B4	HGNC	ENSG00000104043				108	0	0	25	10	28.5714
VPS13C	0	genome.wustl.edu	37	15	62273584	62273584	+	Missense_Mutation	SNP	T	T	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	15	62273584	62273584	T	G	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	missense	c.2123	p.H708P	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003				95	0	0	37	8	17.7778
DAPK2	0	genome.wustl.edu	37	15	64332386	64332386	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	15	64332386	64332386	G	A	SNP	DAPK2	ENST00000261891	human	ensembl	74_37	-1	known	silent	c.75	p.I25	0.719	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DAPK2	HGNC	ENSG00000035664				176	0	0	48	47	49.4737
TBC1D2B	0	genome.wustl.edu	37	15	78290635	78290635	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	15	78290635	78290635	C	T	SNP	TBC1D2B	ENST00000300584	human	ensembl	74_37	-1	known	missense	c.2759	p.R920Q	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Prefoldin,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2B	HGNC	ENSG00000167202				34	0	0	17	4	19.0476
MVP	0	genome.wustl.edu	37	16	29858617	29858617	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	16	29858617	29858617	G	A	SNP	MVP	ENST00000357402	human	ensembl	74_37	+1	known	missense	c.2365	p.E789K	0.987	NULL	pfam_Vault_N,pfam_MVP_shoulder	-	no_errors	MVP	HGNC	ENSG00000013364				106	0	0	56	11	16.4179
ZNF747	0	genome.wustl.edu	37	16	30545794	30545794	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	16	30545794	30545794	G	A	SNP	ZNF747	ENST00000535210	human	ensembl	74_37	-1	known	silent	c.207	p.T69	0.991	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955				34	0	0	10	7	41.1765
EXOC3L1	0	genome.wustl.edu	37	16	67220250	67220250	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	16	67220250	67220250	G	A	SNP	EXOC3L1	ENST00000314586	human	ensembl	74_37	-1	known	silent	c.1386	p.S462	0.957	pfam_Sec6	pfam_Sec6	-	no_errors	EXOC3L1	HGNC	ENSG00000179044				10	0	0	14	5	26.3158
ST3GAL2	0	genome.wustl.edu	37	16	70432202	70432202	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	16	70432202	70432202	C	T	SNP	ST3GAL2	ENST00000342907	human	ensembl	74_37	-1	known	missense	c.232	p.D78N	0.881	pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST3GAL2	HGNC	ENSG00000157350				172	0	0	149	11	6.875
ZFHX3	0	genome.wustl.edu	37	16	72822033	72822033	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	16	72822033	72822033	C	G	SNP	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	missense	c.10142	p.R3381P	0.991	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				76	0	0	82	7	7.86517
WDR59	0	genome.wustl.edu	37	16	74990459	74990459	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	16	74990459	74990459	G	A	SNP	WDR59	ENST00000262144	human	ensembl	74_37	-1	known	nonsense	c.154	p.R52*	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_UBQ-conjugating_enzyme/RWD,smart_WD40_repeat,smart_RWD-domain,pfscan_RWD-domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR59	HGNC	ENSG00000103091				116	0	0	96	7	6.79612
HSD17B2	0	genome.wustl.edu	37	16	82131837	82131837	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	16	82131837	82131837	G	A	SNP	HSD17B2	ENST00000199936	human	ensembl	74_37	+1	known	silent	c.960	p.P320	0.000	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B2	HGNC	ENSG00000086696				179	0	0	142	19	11.8012
CTU2	0	genome.wustl.edu	37	16	88779791	88779791	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	16	88779791	88779791	G	A	SNP	CTU2	ENST00000567949	human	ensembl	74_37	+1	known	missense	c.1022	p.R341H	1.000	NULL	pfam_Thiouridylase_cyt_su2	-	no_errors	CTU2	HGNC	ENSG00000174177				180	0	0	117	41	25.9494
NOS2	0	genome.wustl.edu	37	17	26110016	26110016	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	26110016	26110016	C	T	SNP	NOS2	ENST00000313735	human	ensembl	74_37	-1	known	missense	c.584	p.R195H	1.000	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS2	HGNC	ENSG00000007171				104	0	0	111	6	5.12821
TBC1D29	0	genome.wustl.edu	37	17	28890301	28890301	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	28890301	28890301	G	A	SNP	TBC1D29	ENST00000579181	human	ensembl	74_37	+1	known	missense	c.311	p.S104N	0.904	NULL	superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D29	HGNC	ENSG00000266733				73	0	0	78	11	12.3596
SLFN12L	0	genome.wustl.edu	37	17	33806825	33806825	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	33806825	33806825	G	A	SNP	SLFN12L	ENST00000449046	human	ensembl	74_37	-1	known	missense	c.497	p.P166L	0.000	NULL	pfam_ATPase_AAA-4	-	no_errors	SLFN12L	HGNC	ENSG00000205045				31	0	0	15	17	53.125
MRM1	0	genome.wustl.edu	37	17	34958270	34958270	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	34958270	34958270	A	G	SNP	MRM1	ENST00000250156	human	ensembl	74_37	+1	known	missense	c.31	p.T11A	0.001	NULL	pfam_SpoU_MeTrfase,pfam_SpoU_subst-bd,smart_SpoU_subst-bd,tigrfam_rRNA_MeTrfase_TrmH	-	no_errors	MRM1	HGNC	ENSG00000129282				109	0	0	147	10	6.36943
GPR179	0	genome.wustl.edu	37	17	36485646	36485646	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	36485646	36485646	G	A	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	missense	c.3806	p.T1269M	0.665	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888				143	0	0	176	28	13.7255
CASC3	0	genome.wustl.edu	37	17	38318390	38318390	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38318390	38318390	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	nonsense	c.592	p.Q198*	1.000	pfam_Btz_dom	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				124	0	0	81	991	92.444
CASC3	0	genome.wustl.edu	37	17	38319064	38319064	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38319064	38319064	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	missense	c.695	p.S232F	0.998	pfam_Btz_dom	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				113	0	0	90	850	90.4255
CASC3	0	genome.wustl.edu	37	17	38319117	38319117	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38319117	38319117	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	missense	c.748	p.P250S	0.959	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				141	0	0	97	972	90.9261
CASC3	0	genome.wustl.edu	37	17	38323756	38323756	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38323756	38323756	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	silent	c.1542	p.V514	0.998	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				94	0	0	89	534	85.7143
CASC3	0	genome.wustl.edu	37	17	38323782	38323782	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38323782	38323782	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	missense	c.1568	p.S523L	1.000	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				116	0	0	92	647	87.5507
CASC3	0	genome.wustl.edu	37	17	38323785	38323785	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38323785	38323785	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	missense	c.1571	p.S524F	1.000	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				117	0	0	90	640	87.6712
CASC3	0	genome.wustl.edu	37	17	38323834	38323834	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38323834	38323834	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	silent	c.1620	p.I540	1.000	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				111	0	0	74	614	89.2442
CASC3	0	genome.wustl.edu	37	17	38323862	38323862	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38323862	38323862	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	missense	c.1648	p.P550S	1.000	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				77	0	0	65	439	87.1032
CASC3	0	genome.wustl.edu	37	17	38324513	38324513	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38324513	38324513	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	missense	c.1808	p.P603L	1.000	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				289	0	0	224	1912	89.5131
CASC3	0	genome.wustl.edu	37	17	38324586	38324586	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38324586	38324586	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	silent	c.1881	p.V627	1.000	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				207	0	0	124	1245	90.9423
CASC3	0	genome.wustl.edu	37	17	38324639	38324639	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38324639	38324639	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	missense	c.1934	p.P645L	1.000	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				117	0	0	79	834	91.3472
CASC3	0	genome.wustl.edu	37	17	38325584	38325584	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38325584	38325584	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	missense	c.1973	p.S658L	1.000	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				256	0	0	162	2115	92.8854
CASC3	0	genome.wustl.edu	37	17	38325681	38325681	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38325681	38325681	C	T	SNP	CASC3	ENST00000264645	human	ensembl	74_37	+1	known	silent	c.2070	p.I690	1.000	NULL	pfam_Btz_dom	-	no_errors	CASC3	HGNC	ENSG00000108349				174	1	0.571429	146	1743	92.271
CDC6	0	genome.wustl.edu	37	17	38458232	38458232	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38458232	38458232	C	G	SNP	CDC6	ENST00000209728	human	ensembl	74_37	+1	known	missense	c.1662	p.I554M	1.000	pirsf_Cell_div_Cdc6/18	pfam_ATPase_AAA_core,pfam_Cdc6_C_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_Cell_div_Cdc6/18	-	no_errors	CDC6	HGNC	ENSG00000094804				144	0	0	1090	537	33.0055
KRTAP4-11	0	genome.wustl.edu	37	17	39274204	39274204	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	39274204	39274204	G	T	SNP	KRTAP4-11	ENST00000391413	human	ensembl	74_37	-1	known	missense	c.364	p.P122T	0.090	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-11	HGNC	ENSG00000212721				142	0	0	180	216	54.5455
HAP1	0	genome.wustl.edu	37	17	39888482	39888482	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	39888482	39888482	C	T	SNP	HAP1	ENST00000310778	human	ensembl	74_37	-1	known	silent	c.714	p.E238	1.000	pfam_HAP1_N	pfam_HAP1_N	-	no_errors	HAP1	HGNC	ENSG00000173805				159	0	0	132	791	85.6988
HAP1	0	genome.wustl.edu	37	17	39890671	39890671	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	39890671	39890671	C	T	SNP	HAP1	ENST00000310778	human	ensembl	74_37	-1	known	silent	c.216	p.S72	0.092	NULL	pfam_HAP1_N	-	no_errors	HAP1	HGNC	ENSG00000173805				48	0	0	50	337	87.0801
KLHL10	0	genome.wustl.edu	37	17	39998198	39998198	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	39998198	39998198	G	A	SNP	KLHL10	ENST00000293303	human	ensembl	74_37	+1	known	silent	c.318	p.P106	0.033	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL10	HGNC	ENSG00000161594				138	0	0	98	15	13.2743
KLHL10	0	genome.wustl.edu	37	17	40001590	40001590	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	40001590	40001590	G	T	SNP	KLHL10	ENST00000293303	human	ensembl	74_37	+1	known	missense	c.897	p.W299C	1.000	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL10	HGNC	ENSG00000161594				109	1	0.909091	94	22	18.9655
ACBD4	0	genome.wustl.edu	37	17	43220904	43220904	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	43220904	43220904	G	A	SNP	ACBD4	ENST00000321854	human	ensembl	74_37	+1	known	nonsense	c.884	p.W295*	1.000	NULL	pfam_Acyl-CoA-binding_protein,superfamily_Acyl-CoA-binding_protein,prints_Acyl-CoA-binding_protein	-	no_errors	ACBD4	HGNC	ENSG00000181513				137	0	0	98	65	39.8773
VPS53	0	genome.wustl.edu	37	17	613826	613826	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	613826	613826	G	A	SNP	VPS53	ENST00000437048	human	ensembl	74_37	-1	known	nonsense	c.115	p.R39*	0.999	pfam_Vacuolar_sorting-assoc_54	pfam_Vps53_N,pfam_Vacuolar_sorting-assoc_54	-	no_errors	VPS53	HGNC	ENSG00000141252				170	0	0	37	11	22.9167
AZI1	0	genome.wustl.edu	37	17	79167790	79167790	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	79167790	79167790	G	A	SNP	AZI1	ENST00000269392	human	ensembl	74_37	-1	known	missense	c.2266	p.R756W	1.000	NULL	superfamily_t-SNARE	-	no_errors	AZI1	HGNC	ENSG00000141577				11	0	0	7	3	30
DSG1	0	genome.wustl.edu	37	18	28914024	28914024	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	18	28914024	28914024	C	T	SNP	DSG1	ENST00000257192	human	ensembl	74_37	+1	known	silent	c.864	p.L288	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Desmoglein,prints_Cadherin,prints_Desmosomal_cadherin	-	no_errors	DSG1	HGNC	ENSG00000134760				157	0	0	48	14	22.5806
MEX3C	0	genome.wustl.edu	37	18	48703233	48703233	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	18	48703233	48703233	C	T	SNP	MEX3C	ENST00000406189	human	ensembl	74_37	-1	known	missense	c.1468	p.E490K	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3C	HGNC	ENSG00000176624				240	0	0	87	21	19.4444
LAMA1	0	genome.wustl.edu	37	18	7044734	7044734	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	18	7044734	7044734	G	A	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	silent	c.963	p.G321	0.001	smart_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				222	0	0	101	9	8.18182
NETO1	0	genome.wustl.edu	37	18	70526079	70526079	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	18	70526079	70526079	G	A	SNP	NETO1	ENST00000327305	human	ensembl	74_37	-1	known	nonsense	c.451	p.R151*	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt	-	no_errors	NETO1	HGNC	ENSG00000166342				86	0	0	9	20	68.9655
ADNP2	0	genome.wustl.edu	37	18	77891037	77891037	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	18	77891037	77891037	G	T	SNP	ADNP2	ENST00000262198	human	ensembl	74_37	+1	known	missense	c.160	p.G54C	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ADNP2	HGNC	ENSG00000101544				58	0	0	21	3	12.5
SOGA2	0	genome.wustl.edu	37	18	8813126	8813126	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	18	8813126	8813126	C	T	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	silent	c.2754	p.S918	0.671	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502				82	0	0	27	14	34.1463
LPHN1	0	genome.wustl.edu	37	19	14273897	14273897	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	14273897	14273897	C	T	SNP	LPHN1	ENST00000340736	human	ensembl	74_37	-1	known	missense	c.731	p.S244N	1.000	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like,prints_GPCR_2_latrophilin	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN1	HGNC	ENSG00000072071				76	0	0	49	6	10.9091
RAB8A	0	genome.wustl.edu	37	19	16243039	16243039	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	16243039	16243039	G	A	SNP	RAB8A	ENST00000586682	human	ensembl	74_37	+1	novel	missense	c.529	p.G177R	1.000	smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB8A	HGNC	ENSG00000167461				92	0	0	36	15	29.4118
PLVAP	0	genome.wustl.edu	37	19	17476312	17476312	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	17476312	17476312	G	A	SNP	PLVAP	ENST00000252590	human	ensembl	74_37	-1	known	missense	c.962	p.A321V	0.067	pfam_PV-1	pfam_PV-1	-	no_errors	PLVAP	HGNC	ENSG00000130300				92	0	0	62	9	12.6761
SLC7A9	0	genome.wustl.edu	37	19	33333149	33333149	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	33333149	33333149	C	G	SNP	SLC7A9	ENST00000023064	human	ensembl	74_37	-1	known	missense	c.1149	p.W383C	1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A9	HGNC	ENSG00000021488				129	0	0	59	5	7.8125
LSM14A	0	genome.wustl.edu	37	19	34706038	34706038	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	34706038	34706038	G	C	SNP	LSM14A	ENST00000433627	human	ensembl	74_37	+1	known	missense	c.548	p.S183T	1.000	NULL	pfam_FDF_dom,superfamily_LSM_dom	-	no_errors	LSM14A	HGNC	ENSG00000257103				146	0	0	114	14	10.9375
ACTN4	0	genome.wustl.edu	37	19	39207822	39207822	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	39207822	39207822	G	A	SNP	ACTN4	ENST00000252699	human	ensembl	74_37	+1	known	missense	c.1009	p.D337N	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN4	HGNC	ENSG00000130402				79	0	0	83	9	9.78261
DLL3	0	genome.wustl.edu	37	19	39994903	39994903	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	39994903	39994903	C	T	SNP	DLL3	ENST00000205143	human	ensembl	74_37	+1	known	missense	c.845	p.P282L	0.961	pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DLL3	HGNC	ENSG00000090932				88	0	0	51	16	23.8806
CLASRP	0	genome.wustl.edu	37	19	45573800	45573800	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	45573800	45573800	G	A	SNP	CLASRP	ENST00000221455	human	ensembl	74_37	+1	known	missense	c.1963	p.E655K	1.000	NULL	pfam_SWAP_N_domain	-	no_errors	CLASRP	HGNC	ENSG00000104859				553	0	0	382	32	7.72947
CALM3	0	genome.wustl.edu	37	19	47112465	47112465	+	RNA	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	47112465	47112465	G	A	SNP	CALM3	ENST00000477244	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.870	-	-	-	no_errors	CALM3	HGNC	ENSG00000160014				18	0	0	16	5	23.8095
TRPM4	0	genome.wustl.edu	37	19	49684698	49684698	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	49684698	49684698	C	T	SNP	TRPM4	ENST00000252826	human	ensembl	74_37	+1	known	missense	c.1243	p.R415W	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM4	HGNC	ENSG00000130529				128	0	0	71	16	18.3908
FPR2	0	genome.wustl.edu	37	19	52272135	52272135	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	52272135	52272135	C	T	SNP	FPR2	ENST00000340023	human	ensembl	74_37	+1	known	missense	c.224	p.T75M	0.446	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt,prints_DEZorph_rcpt	-	no_errors	FPR2	HGNC	ENSG00000171049				175	0	0	86	26	23.2143
MUC16	0	genome.wustl.edu	37	19	9068981	9068981	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	19	9068981	9068981	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.18465	p.I6155	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				97	0	0	18	20	52.6316
PSD4	0	genome.wustl.edu	37	2	113950928	113950928	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	113950928	113950928	G	A	SNP	PSD4	ENST00000245796	human	ensembl	74_37	+1	known	silent	c.2013	p.P671	0.000	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD4	HGNC	ENSG00000125637				99	0	0	63	26	29.2135
GYPC	0	genome.wustl.edu	37	2	127451484	127451484	+	Missense_Mutation	SNP	A	A	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	127451484	127451484	A	T	SNP	GYPC	ENST00000259254	human	ensembl	74_37	+1	known	missense	c.151	p.T51S	0.001	NULL	smart_Neurexin-like	-	no_errors	GYPC	HGNC	ENSG00000136732				117	0	0	69	10	12.6582
NEB	0	genome.wustl.edu	37	2	152396912	152396912	+	Silent	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	152396912	152396912	A	G	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	silent	c.20838	p.V6946	0.998	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				12	0	0	15	2	11.7647
IFIH1	0	genome.wustl.edu	37	2	163174424	163174424	+	Silent	SNP	T	T	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	163174424	163174424	T	G	SNP	IFIH1	ENST00000263642	human	ensembl	74_37	-1	known	silent	c.394	p.R132	0.034	pfam_CARD,superfamily_DEATH-like_dom	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_CARD,superfamily_P-loop_NTPase,superfamily_DEATH-like_dom,superfamily_ARM-type_fold,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	IFIH1	HGNC	ENSG00000115267				820	0	0	512	34	6.22711
PXDN	0	genome.wustl.edu	37	2	1652755	1652755	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	1652755	1652755	G	A	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	missense	c.2797	p.R933C	0.625	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508				64	0	0	44	20	31.25
TTN	0	genome.wustl.edu	37	2	179432605	179432605	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	179432605	179432605	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.70550	p.A23517V	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				347	0	0	179	18	9.13706
TTN	0	genome.wustl.edu	37	2	179621329	179621329	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	179621329	179621329	G	A	SNP	TTN	ENST00000342175	human	ensembl	74_37	-1	known	missense	c.10361	p.A3454V	0.020	superfamily_RNaseH-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				81	0	0	62	4	6.06061
ZSWIM2	0	genome.wustl.edu	37	2	187702135	187702135	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	187702135	187702135	G	C	SNP	ZSWIM2	ENST00000295131	human	ensembl	74_37	-1	known	missense	c.641	p.S214C	0.996	NULL	pfam_Znf_SWIM,pfam_Znf_ZZ,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Znf_ZZ	-	no_errors	ZSWIM2	HGNC	ENSG00000163012				128	0	0	66	4	5.71429
MAP2	0	genome.wustl.edu	37	2	210558914	210558914	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	210558914	210558914	C	A	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	missense	c.2020	p.H674N	1.000	pfam_MAP2_projctn	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018				200	0	0	86	11	11.3402
ITM2C	0	genome.wustl.edu	37	2	231742258	231742258	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	231742258	231742258	G	A	SNP	ITM2C	ENST00000326427	human	ensembl	74_37	+1	known	silent	c.705	p.T235	0.072	NULL	pfam_BRICHOS_dom,pfscan_BRICHOS_dom	-	no_errors	ITM2C	HGNC	ENSG00000135916				156	0	0	37	72	66.055
DHX57	0	genome.wustl.edu	37	2	39088395	39088395	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	39088395	39088395	C	T	SNP	DHX57	ENST00000295373	human	ensembl	74_37	-1	known	missense	c.1157	p.R386H	1.000	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD	pfam_RWD-domain,pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Znf_CCCH,superfamily_P-loop_NTPase,superfamily_UBA-like,superfamily_UBQ-conjugating_enzyme/RWD,smart_Znf_CCCH,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX57	HGNC	ENSG00000163214				132	0	0	56	19	25.3333
PLEKHH2	0	genome.wustl.edu	37	2	43980895	43980895	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	43980895	43980895	C	A	SNP	PLEKHH2	ENST00000282406	human	ensembl	74_37	+1	known	missense	c.3791	p.S1264Y	1.000	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH2	HGNC	ENSG00000152527				139	0	0	55	21	27.6316
NRXN1	0	genome.wustl.edu	37	2	51255158	51255158	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	51255158	51255158	C	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.254	p.R85H	0.797	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				47	0	0	10	12	54.5455
BCL11A	0	genome.wustl.edu	37	2	60679623	60679623	+	RNA	SNP	A	A	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	60679623	60679623	A	T	SNP	BCL11A	ENST00000489516	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BCL11A	HGNC	ENSG00000119866				54	0	0	12	28	70
FAM178B	0	genome.wustl.edu	37	2	97559780	97559780	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	97559780	97559780	C	T	SNP	FAM178B	ENST00000417561	human	ensembl	74_37	-1	known	silent	c.2103	p.S701	0.017	NULL	NULL	-	no_errors	FAM178B	HGNC	ENSG00000168754				24	0	0	15	21	58.3333
LZTS3	0	genome.wustl.edu	37	20	3145775	3145775	+	Silent	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	20	3145775	3145775	G	T	SNP	LZTS3	ENST00000329152	human	ensembl	74_37	-1	known	silent	c.1347	p.I449	0.996	NULL	NULL	-	no_errors	LZTS3	Uniprot_gn	ENSG00000088899				22	0	0	17	2	10.5263
TOP1	0	genome.wustl.edu	37	20	39742659	39742659	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	20	39742659	39742659	C	T	SNP	TOP1	ENST00000361337	human	ensembl	74_37	+1	known	missense	c.1502	p.T501I	1.000	pfam_TopoI_cat_euk,superfamily_DNA_brk_join_enz,smart_TopoI_euk,prints_TopoI	pfam_TopoI_DNA-bd_euk,pfam_TopoI_cat_euk,superfamily_TopoI_DNA-bd_euk,superfamily_DNA_brk_join_enz,smart_TopoI_euk,prints_TopoI	-	no_errors	TOP1	HGNC	ENSG00000198900				169	1	0.588235	195	87	30.8511
L3MBTL1	0	genome.wustl.edu	37	20	42164793	42164793	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	20	42164793	42164793	C	T	SNP	L3MBTL1	ENST00000418998	human	ensembl	74_37	+1	known	missense	c.1916	p.A639V	1.000	pfam_Znf_C2HC	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513				68	0	0	136	16	10.5263
SPATA2	0	genome.wustl.edu	37	20	48522761	48522761	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	20	48522761	48522761	C	T	SNP	SPATA2	ENST00000289431	human	ensembl	74_37	-1	known	missense	c.958	p.G320S	0.995	NULL	NULL	-	no_errors	SPATA2	HGNC	ENSG00000158480				165	0	0	122	55	31.0734
SPO11	0	genome.wustl.edu	37	20	55908246	55908246	+	Missense_Mutation	SNP	T	T	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	20	55908246	55908246	T	A	SNP	SPO11	ENST00000371263	human	ensembl	74_37	+1	known	missense	c.248	p.F83Y	1.000	NULL	pfam_Meiosis_Spo11,pfam_Spo11/TopoVI_A_N,superfamily_Spo11/TopoVI_A,prints_Meiotic_Spo11,prints_Spo11/TopoVI_A,prints_TopoVI_A	-	no_errors	SPO11	HGNC	ENSG00000054796				75	0	0	35	16	31.3725
GNAS	0	genome.wustl.edu	37	20	57430309	57430309	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	20	57430309	57430309	G	C	SNP	GNAS	ENST00000371100	human	ensembl	74_37	+1	putative	missense	c.1989	p.K663N	0.063	pfam_Gprotein_alpha_su,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460				20	0	0	25	5	16.6667
CDH26	0	genome.wustl.edu	37	20	58558000	58558000	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	20	58558000	58558000	G	A	SNP	CDH26	ENST00000244047	human	ensembl	74_37	+1	known	missense	c.416	p.R139H	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215				222	0	0	113	42	27.0968
WDR4	0	genome.wustl.edu	37	21	44270229	44270229	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	21	44270229	44270229	C	T	SNP	WDR4	ENST00000330317	human	ensembl	74_37	-1	known	missense	c.1169	p.R390Q	0.132	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR4	HGNC	ENSG00000160193				298	0	0	139	49	26.0638
COL6A1	0	genome.wustl.edu	37	21	47421938	47421938	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	21	47421938	47421938	G	A	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	missense	c.2020	p.V674M	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156				66	0	0	32	14	30.4348
LSS	0	genome.wustl.edu	37	21	47615619	47615619	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	21	47615619	47615619	G	A	SNP	LSS	ENST00000356396	human	ensembl	74_37	-1	known	silent	c.1788	p.F596	0.948	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	-	no_errors	LSS	HGNC	ENSG00000160285				142	0	0	80	24	23.0769
MIR3648	0	genome.wustl.edu	37	21	9825838	9825838	+	RNA	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	21	9825838	9825838	T	C	SNP	MIR3648	ENST00000581792	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.061	-	-	-	no_errors	MIR3648	HGNC	ENSG00000264462				12	0	0	39	8	17.0213
SSTR3	0	genome.wustl.edu	37	22	37603003	37603003	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	22	37603003	37603003	G	A	SNP	SSTR3	ENST00000328544	human	ensembl	74_37	-1	known	silent	c.840	p.N280	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt,prints_Neuropept_B/W_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_3,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Somatstn_rcpt_5,prints_Neuropept_B/W_rcpt	-	no_errors	SSTR3	HGNC	ENSG00000183473				175	0	0	136	10	6.84932
KIAA0930	0	genome.wustl.edu	37	22	45599792	45599792	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	22	45599792	45599792	C	T	SNP	KIAA0930	ENST00000251993	human	ensembl	74_37	-1	known	silent	c.606	p.T202	0.967	pfam_DUF2045	pfam_DUF2045	-	no_errors	KIAA0930	HGNC	ENSG00000100364				117	0	0	53	20	27.3973
GPR128	0	genome.wustl.edu	37	3	100413885	100413885	+	RNA	SNP	G	G	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	100413885	100413885	G	C	SNP	GPR128	ENST00000481506	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPR128	HGNC	ENSG00000144820				90	0	0	31	5	13.8889
IMPG2	0	genome.wustl.edu	37	3	100962804	100962804	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	100962804	100962804	C	T	SNP	IMPG2	ENST00000193391	human	ensembl	74_37	-1	known	missense	c.2371	p.E791K	0.002	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG2	HGNC	ENSG00000081148				133	0	0	45	18	28.5714
ALCAM	0	genome.wustl.edu	37	3	105253671	105253671	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	105253671	105253671	G	A	SNP	ALCAM	ENST00000306107	human	ensembl	74_37	+1	known	missense	c.712	p.A238T	1.000	NULL	pfam_CD80_C2-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	ALCAM	HGNC	ENSG00000170017				131	0	0	44	24	35.2941
DZIP3	0	genome.wustl.edu	37	3	108388536	108388536	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	108388536	108388536	G	A	SNP	DZIP3	ENST00000361582	human	ensembl	74_37	+1	known	missense	c.2432	p.R811H	0.997	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	DZIP3	HGNC	ENSG00000198919				56	0	0	19	7	26.9231
POPDC2	0	genome.wustl.edu	37	3	119367120	119367120	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	119367120	119367120	G	A	SNP	POPDC2	ENST00000341124	human	ensembl	74_37	-1	known	silent	c.996	p.D332	0.989	NULL	pfam_Popeye_prot,superfamily_cNMP-bd-like	-	no_errors	POPDC2	HGNC	ENSG00000121577				40	0	0	18	9	33.3333
PLXNA1	0	genome.wustl.edu	37	3	126749100	126749100	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	126749100	126749100	G	A	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	silent	c.5076	p.K1692	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				204	0	0	116	23	16.5468
TMCC1	0	genome.wustl.edu	37	3	129373845	129373845	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	129373845	129373845	G	A	SNP	TMCC1	ENST00000393238	human	ensembl	74_37	-1	known	missense	c.1613	p.A538V	1.000	pfam_Predicted_TM_coiled-coil_2	pfam_Predicted_TM_coiled-coil_2	-	no_errors	TMCC1	HGNC	ENSG00000172765				146	0	0	64	36	36
LINC00969	0	genome.wustl.edu	37	3	195395451	195395451	+	RNA	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	195395451	195395451	C	T	SNP	LINC00969	ENST00000414625	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00969	HGNC	ENSG00000242086				51	0	0	37	4	9.7561
TMEM42	0	genome.wustl.edu	37	3	44906554	44906554	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	44906554	44906554	A	G	SNP	TMEM42	ENST00000302392	human	ensembl	74_37	+1	known	missense	c.362	p.Y121C	0.996	NULL	NULL	-	no_errors	TMEM42	HGNC	ENSG00000169964				100	0	0	37	14	27.451
NISCH	0	genome.wustl.edu	37	3	52522419	52522419	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	52522419	52522419	G	A	SNP	NISCH	ENST00000345716	human	ensembl	74_37	+1	known	missense	c.2911	p.V971M	0.999	NULL	pfam_Phox,pfam_Leu-rich_rpt,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	NISCH	HGNC	ENSG00000010322				151	0	0	100	6	5.66038
ENSG00000248839	0	genome.wustl.edu	37	3	98244152	98244152	+	RNA	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	3	98244152	98244152	G	A	SNP	ENSG00000248839	ENST00000502999	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-227H4.5	Clone_based_vega_gene	ENSG00000248839				11	0	0	3	8	72.7273
GUCY1B3	0	genome.wustl.edu	37	4	156716576	156716576	+	Silent	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	4	156716576	156716576	T	C	SNP	GUCY1B3	ENST00000264424	human	ensembl	74_37	+1	known	silent	c.810	p.S270	0.224	pfam_Haem_no_assoc-bd	pfam_Haem_no_assoc-bd,pfam_A/G_cyclase,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1B3	HGNC	ENSG00000061918				74	0	0	25	7	21.875
GUCY1B3	0	genome.wustl.edu	37	4	156721189	156721189	+	Silent	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	4	156721189	156721189	T	C	SNP	GUCY1B3	ENST00000264424	human	ensembl	74_37	+1	known	silent	c.1138	p.L380	0.000	pfam_Haem_no_assoc-bd	pfam_Haem_no_assoc-bd,pfam_A/G_cyclase,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1B3	HGNC	ENSG00000061918				69	0	0	36	3	7.69231
TENM3	0	genome.wustl.edu	37	4	183710542	183710542	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	4	183710542	183710542	G	T	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	missense	c.5601	p.K1867N	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336				43	0	0	19	3	13.6364
NPFFR2	0	genome.wustl.edu	37	4	73013068	73013068	+	Nonsense_Mutation	SNP	A	A	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	4	73013068	73013068	A	T	SNP	NPFFR2	ENST00000308744	human	ensembl	74_37	+1	known	nonsense	c.1108	p.K370*	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPFF_rcpt_2,prints_NPFF_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPFFR2	HGNC	ENSG00000056291				128	0	0	49	13	20.9677
DIAPH1	0	genome.wustl.edu	37	5	140908321	140908321	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	5	140908321	140908321	G	A	SNP	DIAPH1	ENST00000253811	human	ensembl	74_37	-1	known	missense	c.2969	p.A990V	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Formin_homology_1,pfam_Drf_DAD,superfamily_ARM-type_fold,superfamily_tRNA-bd_arm,smart_FH2_Formin	-	no_errors	DIAPH1	HGNC	ENSG00000131504				161	0	0	44	22	33.3333
FAT2	0	genome.wustl.edu	37	5	150885379	150885379	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	5	150885379	150885379	G	T	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.12797	p.P4266H	1.000	NULL	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570				255	0	0	122	44	26.506
FLT4	0	genome.wustl.edu	37	5	180039518	180039518	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	5	180039518	180039518	G	A	SNP	FLT4	ENST00000261937	human	ensembl	74_37	-1	known	silent	c.3525	p.G1175	0.167	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR3_rcpt	-	no_errors	FLT4	HGNC	ENSG00000037280				187	0	0	146	22	13.0952
PRDM9	0	genome.wustl.edu	37	5	23527808	23527808	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	5	23527808	23527808	G	A	SNP	PRDM9	ENST00000296682	human	ensembl	74_37	+1	known	missense	c.2611	p.D871N	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC	ENSG00000164256				201	1	0.49505	112	11	8.94309
EGFLAM	0	genome.wustl.edu	37	5	38463963	38463963	+	Missense_Mutation	SNP	A	A	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	5	38463963	38463963	A	T	SNP	EGFLAM	ENST00000354891	human	ensembl	74_37	+1	known	missense	c.2929	p.N977Y	0.973	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Fibronectin_type3,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Laminin_G	-	no_errors	EGFLAM	HGNC	ENSG00000164318				112	0	0	83	7	7.77778
HSPB3	0	genome.wustl.edu	37	5	53751900	53751900	+	Missense_Mutation	SNP	T	T	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	5	53751900	53751900	T	A	SNP	HSPB3	ENST00000302005	human	ensembl	74_37	+1	known	missense	c.281	p.L94Q	1.000	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	HSPB3	HGNC	ENSG00000169271				215	0	0	75	50	40
SYNE1	0	genome.wustl.edu	37	6	152651714	152651714	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	152651714	152651714	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.14106	p.T4702	0.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				61	0	0	32	5	13.5135
MAP3K4	0	genome.wustl.edu	37	6	161469819	161469819	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	161469819	161469819	G	A	SNP	MAP3K4	ENST00000392142	human	ensembl	74_37	+1	known	missense	c.515	p.G172E	0.449	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511				188	0	0	93	11	10.5769
HIST1H1E	0	genome.wustl.edu	37	6	26157126	26157126	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	26157126	26157126	G	T	SNP	HIST1H1E	ENST00000304218	human	ensembl	74_37	+1	known	missense	c.508	p.A170S	1.000	prints_Histone_H5	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1E	HGNC	ENSG00000168298				51	0	0	23	7	23.3333
SERPINB9	0	genome.wustl.edu	37	6	2890467	2890467	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	2890467	2890467	G	A	SNP	SERPINB9	ENST00000380698	human	ensembl	74_37	-1	known	missense	c.1061	p.P354L	1.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom,prints_Serpin_B9/Maspin	-	no_errors	SERPINB9	HGNC	ENSG00000170542				112	0	0	75	18	19.3548
MDC1	0	genome.wustl.edu	37	6	30673340	30673340	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	30673340	30673340	A	G	SNP	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	missense	c.3620	p.L1207P	0.010	NULL	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337				459	3	0.649351	258	36	12.2449
RNF5	0	genome.wustl.edu	37	6	32146405	32146405	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	32146405	32146405	C	T	SNP	RNF5	ENST00000427134	human	ensembl	74_37	+1	known	silent	c.117	p.V39	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF5	HGNC	ENSG00000204308				196	0	0	104	38	26.7606
HLA-DPB1	0	genome.wustl.edu	37	6	33048644	33048644	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	33048644	33048644	G	A	SNP	HLA-DPB1	ENST00000418931	human	ensembl	74_37	+1	known	missense	c.296	p.R99Q	0.006	pfam_MHC_II_b_N,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DPB1	HGNC	ENSG00000223865				109	0	0	80	5	5.88235
TAPBP	0	genome.wustl.edu	37	6	33272850	33272850	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	33272850	33272850	G	A	SNP	TAPBP	ENST00000426633	human	ensembl	74_37	-1	known	nonsense	c.784	p.Q262*	0.108	NULL	pfam_Ig_C1-set,pfscan_Ig-like_dom,prints_Tapasin	-	no_errors	TAPBP	HGNC	ENSG00000231925				271	0	0	178	17	8.71795
TTBK1	0	genome.wustl.edu	37	6	43251385	43251385	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	43251385	43251385	C	T	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	silent	c.2907	p.G969	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216				96	0	0	125	20	13.7931
GPR116	0	genome.wustl.edu	37	6	46845998	46845998	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	46845998	46845998	T	C	SNP	GPR116	ENST00000265417	human	ensembl	74_37	-1	known	missense	c.1181	p.Q394R	0.928	pfscan_Ig-like_dom	pfam_GPCR_2_secretin-like,pfam_SEA_dom,pfam_GPS_dom,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom,prints_GPCR_2_Ig-hepta_rcpt,prints_GPCR_2_secretin-like	-	no_errors	GPR116	HGNC	ENSG00000069122				96	0	0	88	6	6.38298
GCM1	0	genome.wustl.edu	37	6	52993582	52993582	+	Nonsense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	52993582	52993582	C	A	SNP	GCM1	ENST00000259803	human	ensembl	74_37	-1	known	nonsense	c.733	p.G245*	0.048	NULL	pfam_Tscrpt_reg_GCM_motif,superfamily_Tscrpt_reg_GCM_motif,pfscan_Tscrpt_reg_GCM_motif	-	no_errors	GCM1	HGNC	ENSG00000137270				109	0	0	68	9	11.6883
COL12A1	0	genome.wustl.edu	37	6	75875408	75875408	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	75875408	75875408	C	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.2798	p.R933H	0.988	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				191	1	0.520833	99	12	10.8108
GRM8	0	genome.wustl.edu	37	7	126086384	126086384	+	Missense_Mutation	SNP	T	T	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	7	126086384	126086384	T	G	SNP	GRM8	ENST00000339582	human	ensembl	74_37	-1	known	missense	c.2473	p.S825R	1.000	pfam_GPCR_3_C,prints_GPCR_3_mtglu_rcpt,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_8,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4,pfscan_GPCR_3_C	-	no_errors	GRM8	HGNC	ENSG00000179603				87	0	0	45	12	21.0526
CCDC136	0	genome.wustl.edu	37	7	128432417	128432417	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	7	128432417	128432417	C	T	SNP	CCDC136	ENST00000464832	human	ensembl	74_37	+1	known	silent	c.102	p.G34	0.921	NULL	NULL	-	no_errors	CCDC136	HGNC	ENSG00000128596				115	0	0	33	8	19.5122
ATP6V0A4	0	genome.wustl.edu	37	7	138447126	138447126	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	7	138447126	138447126	C	T	SNP	ATP6V0A4	ENST00000310018	human	ensembl	74_37	-1	known	silent	c.471	p.L157	1.000	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	ATP6V0A4	HGNC	ENSG00000105929				168	0	0	71	13	15.4762
DPP6	0	genome.wustl.edu	37	7	154595578	154595578	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	7	154595578	154595578	A	G	SNP	DPP6	ENST00000377770	human	ensembl	74_37	+1	known	missense	c.1412	p.N471S	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_PD40	-	no_errors	DPP6	HGNC	ENSG00000130226				59	0	0	40	4	9.09091
KIAA0895	0	genome.wustl.edu	37	7	36374696	36374696	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	7	36374696	36374696	G	A	SNP	KIAA0895	ENST00000297063	human	ensembl	74_37	-1	known	missense	c.959	p.A320V	1.000	pfam_DUF1704	pfam_DUF1704	-	no_errors	KIAA0895	HGNC	ENSG00000164542				189	1	0.526316	101	13	11.4035
SDK1	0	genome.wustl.edu	37	7	4116664	4116664	+	Silent	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	7	4116664	4116664	C	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	silent	c.3045	p.N1015	0.006	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				71	0	0	35	24	40.678
FBXL18	0	genome.wustl.edu	37	7	5521433	5521433	+	Silent	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	7	5521433	5521433	G	A	SNP	FBXL18	ENST00000382368	human	ensembl	74_37	-1	known	silent	c.2130	p.A710	0.336	NULL	pfam_F-box_dom,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXL18	HGNC	ENSG00000155034				337	0	0	207	24	10.3896
CYP3A4	0	genome.wustl.edu	37	7	99359710	99359710	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	7	99359710	99359710	G	A	SNP	CYP3A4	ENST00000336411	human	ensembl	74_37	-1	known	missense	c.1207	p.R403C	0.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_CYP3A,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP3A4	HGNC	ENSG00000160868				212	0	0	113	13	10.3175
HAS2	0	genome.wustl.edu	37	8	122626561	122626561	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	8	122626561	122626561	C	T	SNP	HAS2	ENST00000303924	human	ensembl	74_37	-1	known	missense	c.1447	p.V483I	0.873	NULL	pfam_Chitin_synth_fng	-	no_errors	HAS2	HGNC	ENSG00000170961				203	0	0	118	17	12.5926
TRMT12	0	genome.wustl.edu	37	8	125463149	125463149	+	RNA	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	8	125463149	125463149	G	A	SNP	TRMT12	ENST00000521443	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	TRMT12	HGNC	ENSG00000183665				166	0	0	134	21	13.5484
CYP11B1	0	genome.wustl.edu	37	8	143958275	143958275	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	8	143958275	143958275	G	A	SNP	CYP11B1	ENST00000292427	human	ensembl	74_37	-1	known	missense	c.622	p.R208W	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP11B1	HGNC	ENSG00000160882				75	0	0	72	20	21.7391
ZNF34	0	genome.wustl.edu	37	8	145999177	145999177	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	8	145999177	145999177	G	A	SNP	ZNF34	ENST00000343459	human	ensembl	74_37	-1	known	missense	c.1157	p.T386I	0.997	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF34	HGNC	ENSG00000196378				66	0	0	40	28	41.1765
CSMD1	0	genome.wustl.edu	37	8	2807839	2807839	+	Missense_Mutation	SNP	A	A	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	8	2807839	2807839	A	C	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.10231	p.L3411V	1.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				219	0	0	74	21	22.1053
CSMD1	0	genome.wustl.edu	37	8	3265646	3265646	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	8	3265646	3265646	A	G	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.1849	p.S617P	0.990	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				50	0	0	43	4	8.51064
PRKDC	0	genome.wustl.edu	37	8	48815328	48815328	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	8	48815328	48815328	T	C	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.3070	p.T1024A	1.000	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				57	0	0	30	3	9.09091
PCMTD1	0	genome.wustl.edu	37	8	52773426	52773426	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	8	52773426	52773426	T	C	SNP	PCMTD1	ENST00000360540	human	ensembl	74_37	-1	known	missense	c.286	p.T96A	1.000	pfam_PCMT	pfam_PCMT	-	no_errors	PCMTD1	HGNC	ENSG00000168300				88	0	0	25	4	13.7931
PPP1R42	0	genome.wustl.edu	37	8	67926745	67926745	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	8	67926745	67926745	G	A	SNP	PPP1R42	ENST00000522909	human	ensembl	74_37	-1	known	missense	c.212	p.A71V	1.000	NULL	pfam_Leu-rich_rpt	-	no_errors	PPP1R42	HGNC	ENSG00000178125				137	0	0	55	6	9.83607
OR13C4	0	genome.wustl.edu	37	9	107288811	107288811	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	9	107288811	107288811	C	T	SNP	OR13C4	ENST00000277216	human	ensembl	74_37	-1	known	missense	c.680	p.R227Q	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR13C4	HGNC	ENSG00000148136				262	0	0	98	11	10.0917
ORM2	0	genome.wustl.edu	37	9	117092829	117092829	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	9	117092829	117092829	C	T	SNP	ORM2	ENST00000431067	human	ensembl	74_37	+1	known	missense	c.230	p.T77M	0.000	pfam_Lipocln_cytosolic_FA-bd_dom,pfam_ApoM,superfamily_Calycin-like,pirsf_A1A_glycop	pfam_Lipocln_cytosolic_FA-bd_dom,pfam_ApoM,superfamily_Calycin-like,pirsf_A1A_glycop,prints_A1A_glycop	-	no_errors	ORM2	HGNC	ENSG00000228278				159	0	0	52	7	11.8644
C9orf85	0	genome.wustl.edu	37	9	74586527	74586527	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	9	74586527	74586527	G	A	SNP	C9orf85	ENST00000377031	human	ensembl	74_37	+1	known	missense	c.316	p.V106I	1.000	NULL	pfam_DUF2039	-	no_errors	C9orf85	HGNC	ENSG00000155621				90	0	0	31	5	13.8889
C1GALT1C1	0	genome.wustl.edu	37	X	119761012	119761012	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	119761012	119761012	C	T	SNP	C1GALT1C1	ENST00000304661	human	ensembl	74_37	-1	known	missense	c.10	p.E4K	1.000	NULL	NULL	-	no_errors	C1GALT1C1	HGNC	ENSG00000171155				128	0	0	44	20	31.25
TENM1	0	genome.wustl.edu	37	X	123637484	123637484	+	Missense_Mutation	SNP	T	T	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	123637484	123637484	T	G	SNP	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	missense	c.3371	p.Q1124P	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694				477	0	0	186	57	23.4568
DCAF12L1	0	genome.wustl.edu	37	X	125685489	125685489	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	125685489	125685489	C	A	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	missense	c.1103	p.G368V	0.998	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				145	0	0	101	8	7.33945
DCAF12L1	0	genome.wustl.edu	37	X	125685509	125685509	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	125685509	125685509	G	C	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	missense	c.1083	p.H361Q	0.994	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				146	0	0	99	6	5.71429
USP26	0	genome.wustl.edu	37	X	132161102	132161102	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	132161102	132161102	C	T	SNP	USP26	ENST00000370832	human	ensembl	74_37	-1	known	missense	c.1147	p.A383T	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP26	HGNC	ENSG00000134588				246	0	0	122	7	5.42636
ZNF449	0	genome.wustl.edu	37	X	134494366	134494366	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	134494366	134494366	C	T	SNP	ZNF449	ENST00000339249	human	ensembl	74_37	+1	known	missense	c.922	p.L308F	0.014	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF449	HGNC	ENSG00000173275				192	0	0	85	29	25.4386
MMGT1	0	genome.wustl.edu	37	X	135049602	135049602	+	Silent	SNP	A	A	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	135049602	135049602	A	G	SNP	MMGT1	ENST00000433339	human	ensembl	74_37	-1	known	silent	c.378	p.V126	0.999	pfam_Magnesium_transport	pfam_Magnesium_transport	-	no_errors	MMGT1	HGNC	ENSG00000169446				294	0	0	94	32	25.3968
LDOC1	0	genome.wustl.edu	37	X	140271115	140271115	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	140271115	140271115	C	T	SNP	LDOC1	ENST00000370526	human	ensembl	74_37	-1	known	missense	c.92	p.R31Q	1.000	NULL	NULL	-	no_errors	LDOC1	HGNC	ENSG00000182195				52	0	0	41	6	12.766
MAGEC1	0	genome.wustl.edu	37	X	140993323	140993323	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	140993323	140993323	G	A	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.133	p.D45N	0.412	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495				311	1	0.320513	185	47	20.2586
AFF2	0	genome.wustl.edu	37	X	148039901	148039901	+	Missense_Mutation	SNP	A	A	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	148039901	148039901	A	C	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.2603	p.K868T	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				533	0	0	331	33	9.06593
XIST	0	genome.wustl.edu	37	X	73063082	73063082	+	RNA	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	73063082	73063082	C	A	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				199	0	0	67	6	8.21918
DACH2	0	genome.wustl.edu	37	X	86067873	86067873	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	86067873	86067873	C	A	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.1255	p.Q419K	0.970	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733				75	0	0	20	7	25.9259
PCDH11X	0	genome.wustl.edu	37	X	91134257	91134257	+	Silent	SNP	C	C	G			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	91134257	91134257	C	G	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	silent	c.3018	p.S1006	1.000	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290				260	0	0	36	28	43.75
NAP1L3	0	genome.wustl.edu	37	X	92927838	92927838	+	Nonsense_Mutation	SNP	C	C	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	92927838	92927838	C	A	SNP	NAP1L3	ENST00000373079	human	ensembl	74_37	-1	known	nonsense	c.466	p.E156*	0.996	pfam_NAP_family	pfam_NAP_family	-	no_errors	NAP1L3	HGNC	ENSG00000186310				105	0	0	28	3	9.67742
CRB1	0	genome.wustl.edu	37	1	197404649	197404650	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	1	197404649	197404650	AG	-	DEL	CRB1	ENST00000367400	human	ensembl	74_37	+1	known	frame_shift_del	c.3656_3657	p.H1221fs	0.114:0.043	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	CRB1	HGNC	ENSG00000134376				67	0	0	29	17	36.9565
KIAA1462	0	genome.wustl.edu	37	10	30316500	30316501	+	In_Frame_Ins	INS	-	-	CTG			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	10	30316500	30316501	-	CTG	INS	KIAA1462	ENST00000375377	human	ensembl	74_37	-1	known	in_frame_ins	c.2577_2576	p.860in_frame_insS	0.000:0.000	NULL	NULL	-	no_errors	KIAA1462	HGNC	ENSG00000165757				154	0	0	143	36	20.1117
ENSG00000247373	0	genome.wustl.edu	37	12	124069493	124069494	+	RNA	INS	-	-	T			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	12	124069493	124069494	-	T	INS	ENSG00000247373	ENST00000498967	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.020	-	-	-	no_errors	RP11-486O12.2	Clone_based_vega_gene	ENSG00000247373				9	0	0	10	3	23.0769
DHRS7	0	genome.wustl.edu	37	14	60616089	60616089	+	Frame_Shift_Del	DEL	C	C	-			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	14	60616089	60616089	C	-	DEL	DHRS7	ENST00000216500	human	ensembl	74_37	-1	known	frame_shift_del	c.954	p.N319fs	1.000	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	DHRS7	HGNC	ENSG00000100612				132	0	0	32	15	31.9149
GSDMB	0	genome.wustl.edu	37	17	38065247	38065254	+	Frame_Shift_Del	DEL	CTCGATAG	CTCGATAG	-			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	CTCGATAG	CTCGATAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	38065247	38065254	CTCGATAG	-	DEL	GSDMB	ENST00000360317	human	ensembl	74_37	-1	known	frame_shift_del	c.625_618	p.Y207fs	0.000:0.000:0.000:0.000:0.000:0.001:0.003:0.003	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMB	HGNC	ENSG00000073605				372	0	0	213	30	12.3457
KRTAP4-1	0	genome.wustl.edu	37	17	39340796	39340852	+	In_Frame_Del	DEL	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	-			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	39340796	39340852	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	-	DEL	KRTAP4-1	ENST00000398472	human	ensembl	74_37	-1	known	in_frame_del	c.311_255	p.CQTTCHPSCGMSSCCRPLC89in_frame_del	0.000:0.000:0.001:0.016:0.034:0.145:0.511:0.542:0.519:0.518:0.964:0.947:0.884:0.747:0.547:0.070:0.001:0.000:0.031:0.014:0.023:0.765:0.795:0.809:0.721:0.109:0.132:0.170:0.447:0.477:0.451:0.448:0.863:1.000:1.000:0.978:0.654:0.912:0.977:0.982:0.038:0.317:0.493:0.653:0.846:0.968:0.984:0.985:0.890:0.887:0.884:0.025:0.000:0.002:0.861:0.864:0.845	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-1	HGNC	ENSG00000198443				61	0	0	309	45	12.7119
TP53	0	genome.wustl.edu	37	17	7577141	7577141	+	Frame_Shift_Del	DEL	C	C	-			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	17	7577141	7577141	C	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	frame_shift_del	c.797	p.G266fs	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				19	0	0	16	14	46.6667
LBX2	0	genome.wustl.edu	37	2	74729922	74729924	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	2	74729922	74729924	CCT	-	DEL	LBX2	ENST00000460508	human	ensembl	74_37	-1	known	in_frame_del	c.65_63	p.G22in_frame_del	0.000:0.000:0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	LBX2	HGNC	ENSG00000179528				169	0	0	93	38	29.0076
AMD1	0	genome.wustl.edu	37	6	111210105	111210106	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	6	111210105	111210106	AT	-	DEL	AMD1	ENST00000368885	human	ensembl	74_37	+1	known	frame_shift_del	c.243_244	p.C82fs	1.000:1.000	pfam_S-AdoMet_decarboxylase,superfamily_S-AdoMet_deCO2ase_core,pirsf_S-AdoMet_decarboxylase_subgr,tigrfam_S-AdoMet_decarboxylase_subgr	pfam_S-AdoMet_decarboxylase,superfamily_S-AdoMet_deCO2ase_core,pirsf_S-AdoMet_decarboxylase_subgr,tigrfam_S-AdoMet_decarboxylase_subgr	-	no_errors	AMD1	HGNC	ENSG00000123505				159	0	0	73	16	17.9775
SSPO	0	genome.wustl.edu	37	7	149486859	149486860	+	RNA	INS	-	-	C			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	7	149486859	149486860	-	C	INS	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.094:0.076	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				118	0	0	87	23	20.9091
SAGE1	0	genome.wustl.edu	37	X	134994050	134994051	+	Frame_Shift_Ins	INS	-	-	A			TCGA-EQ-8122-01A-11D-2340-08	TCGA-EQ-8122-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	92f8dd8e-79d8-41ce-a8a0-c87352312b1d	a88d1cd7-f636-428f-b2c9-16d70e4018bf	X	134994050	134994051	-	A	INS	SAGE1	ENST00000324447	human	ensembl	74_37	+1	known	frame_shift_ins	c.2459_2460	p.K822fs	0.003:0.001	NULL	NULL	-	no_errors	SAGE1	HGNC	ENSG00000181433				166	0	0	81	19	19
