Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ATAD3B	0	genome.wustl.edu	37	1	1431060	1431060	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	1431060	1431060	T	C	SNP	ATAD3B	ENST00000308647	human	ensembl	74_37	+1	known	missense	c.1810	p.Y604H	0.001	NULL	pfam_DUF3523,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD3B	HGNC	ENSG00000160072				52	0	0	36	6	14.2857
LOC101927345	0	genome.wustl.edu	37	1	143398887	143398887	+	RNA	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	143398887	143398887	C	T	SNP	LOC101927345	ENST00000428624	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261				30	0	0	13	8	38.0952
TCHH	0	genome.wustl.edu	37	1	152085471	152085471	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	152085471	152085471	G	T	SNP	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	missense	c.222	p.F74L	0.997	pfscan_EF_hand_dom	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450				66	0	0	31	37	54.4118
FLG	0	genome.wustl.edu	37	1	152277911	152277911	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	152277911	152277911	C	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.9451	p.A3151S	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				381	0	0	229	268	53.9235
FLG	0	genome.wustl.edu	37	1	152280891	152280891	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	152280891	152280891	C	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	silent	c.6471	p.S2157	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				589	1	0.169492	648	242	27.191
KPRP	0	genome.wustl.edu	37	1	152732601	152732601	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	152732601	152732601	C	T	SNP	KPRP	ENST00000368773	human	ensembl	74_37	+1	known	silent	c.537	p.S179	0.977	NULL	NULL	-	no_errors	KPRP	HGNC	ENSG00000203786				143	0	0	162	42	20.5882
FCRL4	0	genome.wustl.edu	37	1	157550141	157550141	+	RNA	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	157550141	157550141	G	A	SNP	FCRL4	ENST00000479869	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FCRL4	HGNC	ENSG00000163518				101	0	0	134	55	29.1005
COPA	0	genome.wustl.edu	37	1	160262393	160262393	+	Silent	SNP	T	T	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	160262393	160262393	T	C	SNP	COPA	ENST00000368069	human	ensembl	74_37	-1	known	silent	c.2868	p.V956	0.833	pfam_Coatomer_asu_C,pirsf_Coatomer_asu	pfam_Coatomer_asu_C,pfam_Coatomer_WD-assoc_reg,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Coatomer_asu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	COPA	HGNC	ENSG00000122218				94	0	0	109	28	20.438
CFHR2	0	genome.wustl.edu	37	1	196928061	196928061	+	Nonsense_Mutation	SNP	A	A	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	196928061	196928061	A	T	SNP	CFHR2	ENST00000367415	human	ensembl	74_37	+1	known	nonsense	c.664	p.K222*	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR2	HGNC	ENSG00000080910				48	0	0	37	10	21.2766
ASPM	0	genome.wustl.edu	37	1	197087072	197087072	+	Silent	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	197087072	197087072	G	T	SNP	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	silent	c.3912	p.I1304	0.019	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279				107	0	0	57	81	58.6957
PIK3C2B	0	genome.wustl.edu	37	1	204412703	204412703	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	204412703	204412703	C	T	SNP	PIK3C2B	ENST00000367187	human	ensembl	74_37	-1	known	missense	c.2890	p.D964N	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,smart_C2_dom,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2B	HGNC	ENSG00000133056				255	0	0	160	170	51.5152
RBBP5	0	genome.wustl.edu	37	1	205066019	205066019	+	Nonsense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	205066019	205066019	G	C	SNP	RBBP5	ENST00000264515	human	ensembl	74_37	-1	known	nonsense	c.1187	p.S396*	1.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RBBP5	HGNC	ENSG00000117222				101	0	0	74	42	36.2069
HLX	0	genome.wustl.edu	37	1	221054609	221054609	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	221054609	221054609	G	T	SNP	HLX	ENST00000366903	human	ensembl	74_37	+1	known	missense	c.666	p.Q222H	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	HLX	HGNC	ENSG00000136630				135	0	0	187	42	18.3406
DUSP10	0	genome.wustl.edu	37	1	221879731	221879731	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	221879731	221879731	C	A	SNP	DUSP10	ENST00000366899	human	ensembl	74_37	-1	known	missense	c.889	p.G297W	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,superfamily_Blood-coag_inhib_Disintegrin,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP,prints_Atypical_DUSP	-	no_errors	DUSP10	HGNC	ENSG00000143507				143	1	0.694444	96	176	64.7059
DISP1	0	genome.wustl.edu	37	1	223176630	223176630	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	223176630	223176630	C	T	SNP	DISP1	ENST00000284476	human	ensembl	74_37	+1	novel	nonsense	c.1891	p.R631*	0.935	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	DISP1	HGNC	ENSG00000154309				120	0	0	178	44	19.8198
ITPKB	0	genome.wustl.edu	37	1	226924068	226924068	+	Silent	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	226924068	226924068	G	A	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	silent	c.1092	p.R364	0.000	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772				111	0	0	139	36	20.5714
TTC13	0	genome.wustl.edu	37	1	231047269	231047269	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	231047269	231047269	G	C	SNP	TTC13	ENST00000366661	human	ensembl	74_37	-1	known	missense	c.2256	p.I752M	1.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC13	HGNC	ENSG00000143643				27	0	0	50	11	18.0328
RYR2	0	genome.wustl.edu	37	1	237666797	237666797	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	237666797	237666797	A	G	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.2599	p.T867A	0.997	pfam_Ryanodine_rcpt	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				120	0	0	195	47	19.4215
RYR2	0	genome.wustl.edu	37	1	237947675	237947675	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	237947675	237947675	C	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.12681	p.S4227	0.028	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				82	0	0	53	58	52.2523
AHCTF1	0	genome.wustl.edu	37	1	247013345	247013345	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	247013345	247013345	G	C	SNP	AHCTF1	ENST00000326225	human	ensembl	74_37	-1	known	missense	c.5990	p.S1997C	0.000	NULL	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	AHCTF1	HGNC	ENSG00000153207				67	0	0	112	7	5.88235
OR13G1	0	genome.wustl.edu	37	1	247835974	247835974	+	Missense_Mutation	SNP	A	A	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	247835974	247835974	A	T	SNP	OR13G1	ENST00000359688	human	ensembl	74_37	-1	known	missense	c.370	p.C124S	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR13G1	HGNC	ENSG00000197437				62	0	0	67	21	23.8636
RNF220	0	genome.wustl.edu	37	1	44878012	44878012	+	Silent	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	44878012	44878012	C	A	SNP	RNF220	ENST00000355387	human	ensembl	74_37	+1	known	silent	c.243	p.G81	1.000	NULL	superfamily_Peptidase_M20_dimer,pfscan_Znf_RING	-	no_errors	RNF220	HGNC	ENSG00000187147				422	2	0.471698	313	153	32.8326
ELAVL4	0	genome.wustl.edu	37	1	50666792	50666792	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	50666792	50666792	G	A	SNP	ELAVL4	ENST00000371821	human	ensembl	74_37	+1	known	missense	c.1100	p.R367H	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL4	HGNC	ENSG00000162374				101	0	0	68	35	33.9806
WLS	0	genome.wustl.edu	37	1	68615882	68615882	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	68615882	68615882	C	T	SNP	WLS	ENST00000540432	human	ensembl	74_37	-1	known	missense	c.961	p.E321K	1.000	NULL	NULL	-	no_errors	WLS	HGNC	ENSG00000116729				125	0	0	23	47	67.1429
GBP5	0	genome.wustl.edu	37	1	89728058	89728058	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	89728058	89728058	T	C	SNP	GBP5	ENST00000343435	human	ensembl	74_37	-1	known	missense	c.1492	p.K498E	0.000	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP5	HGNC	ENSG00000154451				65	0	0	10	18	64.2857
SEPT7P9	0	genome.wustl.edu	37	10	38681011	38681011	+	RNA	SNP	A	A	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	10	38681011	38681011	A	T	SNP	SEPT7P9	ENST00000475691	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SEPT7P9	HGNC	ENSG00000120555				15	0	0	13	5	27.7778
OGDHL	0	genome.wustl.edu	37	10	50943164	50943164	+	RNA	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	10	50943164	50943164	C	A	SNP	OGDHL	ENST00000490844	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OGDHL	HGNC	ENSG00000197444				48	0	0	25	14	35.8974
TNKS2	0	genome.wustl.edu	37	10	93611020	93611020	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	10	93611020	93611020	G	T	SNP	TNKS2	ENST00000371627	human	ensembl	74_37	+1	known	missense	c.2742	p.E914D	1.000	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS2	HGNC	ENSG00000107854				95	0	0	26	86	76.7857
PIPSL	0	genome.wustl.edu	37	10	95719188	95719188	+	RNA	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	10	95719188	95719188	C	T	SNP	PIPSL	ENST00000480546	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	PIPSL	HGNC	ENSG00000180764				89	0	0	19	30	61.2245
GUCY1A2	0	genome.wustl.edu	37	11	106647285	106647285	+	Nonsense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	106647285	106647285	G	T	SNP	GUCY1A2	ENST00000282249	human	ensembl	74_37	-1	known	nonsense	c.1716	p.Y572*	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_Haem_no_assoc-bd,pfam_A/G_cyclase,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1A2	HGNC	ENSG00000152402				48	0	0	51	17	25
ZBTB16	0	genome.wustl.edu	37	11	113935245	113935245	+	Missense_Mutation	SNP	T	T	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	113935245	113935245	T	A	SNP	ZBTB16	ENST00000335953	human	ensembl	74_37	+1	known	missense	c.1223	p.V408E	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB16	HGNC	ENSG00000109906				110	0	0	70	45	39.1304
CADM1	0	genome.wustl.edu	37	11	115049487	115049487	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	115049487	115049487	C	A	SNP	CADM1	ENST00000452722	human	ensembl	74_37	-1	known	missense	c.1087	p.A363S	1.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like_dom	-	no_errors	CADM1	HGNC	ENSG00000182985				119	0	0	65	31	32.2917
SIK3	0	genome.wustl.edu	37	11	116734399	116734399	+	Nonsense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	116734399	116734399	G	C	SNP	SIK3	ENST00000375288	human	ensembl	74_37	-1	known	nonsense	c.65	p.S22*	1.000	NULL	NULL	-	no_errors	SIK3	HGNC	ENSG00000160584				170	0	0	117	75	39.0625
VPS11	0	genome.wustl.edu	37	11	118942531	118942531	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	118942531	118942531	C	T	SNP	VPS11	ENST00000300793	human	ensembl	74_37	+1	known	missense	c.859	p.R287C	1.000	superfamily_WD40_repeat_dom,pirsf_VPS11	pfam_VPS11_C,pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_RING,pirsf_VPS11,pfscan_Znf_RING	-	no_errors	VPS11	HGNC	ENSG00000160695				163	0	0	103	63	37.9518
OR10G9	0	genome.wustl.edu	37	11	123894205	123894205	+	Silent	SNP	T	T	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	123894205	123894205	T	A	SNP	OR10G9	ENST00000375024	human	ensembl	74_37	+1	known	silent	c.486	p.T162	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G9	HGNC	ENSG00000236981				329	0	0	194	140	41.9162
OR8A1	0	genome.wustl.edu	37	11	124440783	124440783	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	124440783	124440783	C	A	SNP	OR8A1	ENST00000284287	human	ensembl	74_37	+1	known	missense	c.819	p.F273L	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8A1	HGNC	ENSG00000196119				87	0	0	43	33	43.4211
SIAE	0	genome.wustl.edu	37	11	124543599	124543599	+	Silent	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	124543599	124543599	G	C	SNP	SIAE	ENST00000263593	human	ensembl	74_37	-1	known	silent	c.6	p.V2	0.000	NULL	pfam_DUF303_acetylest	-	no_errors	SIAE	HGNC	ENSG00000110013				44	0	0	26	20	43.4783
DBX1	0	genome.wustl.edu	37	11	20181547	20181547	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	20181547	20181547	C	T	SNP	DBX1	ENST00000227256	human	ensembl	74_37	-1	known	silent	c.324	p.L108	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	DBX1	HGNC	ENSG00000109851				45	0	0	34	16	32
HARBI1	0	genome.wustl.edu	37	11	46637422	46637422	+	Silent	SNP	T	T	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	46637422	46637422	T	C	SNP	HARBI1	ENST00000326737	human	ensembl	74_37	-1	known	silent	c.366	p.P122	0.520	NULL	pfam_Harbinger_derived_prot_plant	-	no_errors	HARBI1	HGNC	ENSG00000180423				246	1	0.404858	179	127	41.5033
F2	0	genome.wustl.edu	37	11	46747627	46747627	+	Missense_Mutation	SNP	A	A	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	46747627	46747627	A	T	SNP	F2	ENST00000311907	human	ensembl	74_37	+1	known	missense	c.778	p.N260Y	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pirsf_Prothrombin/thrombin,pfscan_Kringle	pfam_Peptidase_S1,pfam_Kringle,pfam_Thrombin_light_chain,pfam_GLA_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,superfamily_GLA_domain,smart_GLA_domain,smart_Kringle,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_GLA_domain,pfscan_Kringle,pfscan_Peptidase_S1,prints_Prothrombin/thrombin,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F2	HGNC	ENSG00000180210				154	0	0	79	54	40.6015
OR4C15	0	genome.wustl.edu	37	11	55321947	55321947	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	55321947	55321947	G	A	SNP	OR4C15	ENST00000314644	human	ensembl	74_37	+1	known	missense	c.165	p.M55I	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939				117	0	0	59	39	39.7959
OR52E8	0	genome.wustl.edu	37	11	5878629	5878629	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	5878629	5878629	C	T	SNP	OR52E8	ENST00000537935	human	ensembl	74_37	-1	known	missense	c.304	p.G102S	0.246	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52E8	HGNC	ENSG00000183269				202	0	0	134	76	36.1905
EML3	0	genome.wustl.edu	37	11	62370362	62370362	+	Splice_Site	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	62370362	62370362	C	A	SNP	EML3	ENST00000394773	human	ensembl	74_37	-1	known	splice_site	c.2357-1	e21-1	1.000	-	-	-	no_errors	EML3	HGNC	ENSG00000149499				21	0	0	13	2	13.3333
ESRRA	0	genome.wustl.edu	37	11	64081441	64081441	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	64081441	64081441	G	A	SNP	ESRRA	ENST00000000442	human	ensembl	74_37	+1	known	missense	c.344	p.C115Y	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESRRA	HGNC	ENSG00000173153				13	0	0	12	8	40
EFEMP2	0	genome.wustl.edu	37	11	65638628	65638628	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	11	65638628	65638628	C	G	SNP	EFEMP2	ENST00000307998	human	ensembl	74_37	-1	known	missense	c.367	p.D123H	1.000	pfam_EGF-like_Ca-bd_dom,superfamily_TIL_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,superfamily_TIL_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,prints_Thrombomodulin	-	no_errors	EFEMP2	HGNC	ENSG00000172638				96	0	0	62	8	11.4286
LHX5	0	genome.wustl.edu	37	12	113909163	113909163	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	113909163	113909163	C	G	SNP	LHX5	ENST00000261731	human	ensembl	74_37	-1	known	missense	c.141	p.E47D	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX5	HGNC	ENSG00000089116				67	0	0	23	14	37.8378
KRAS	0	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	25398284	25398284	C	A	SNP	KRAS	ENST00000256078	human	ensembl	74_37	-1	known	missense	c.35	p.G12V	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC	ENSG00000133703				20	0	0	18	7	28
RAPGEF3	0	genome.wustl.edu	37	12	48132941	48132941	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	48132941	48132941	G	A	SNP	RAPGEF3	ENST00000389212	human	ensembl	74_37	-1	known	missense	c.2446	p.P816S	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_DEP_dom,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF3	HGNC	ENSG00000079337				75	0	0	39	23	37.0968
TROAP	0	genome.wustl.edu	37	12	49724003	49724003	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	49724003	49724003	G	A	SNP	TROAP	ENST00000257909	human	ensembl	74_37	+1	known	missense	c.1375	p.G459R	0.027	NULL	NULL	-	no_errors	TROAP	HGNC	ENSG00000135451				223	0	0	144	72	33.3333
MFSD5	0	genome.wustl.edu	37	12	53647296	53647296	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	53647296	53647296	A	G	SNP	MFSD5	ENST00000534842	human	ensembl	74_37	+1	known	missense	c.998	p.Y333C	1.000	pfam_DUF791,pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_DUF791,pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD5	HGNC	ENSG00000182544				143	0	0	68	71	51.0791
MAP3K12	0	genome.wustl.edu	37	12	53880372	53880372	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	53880372	53880372	G	C	SNP	MAP3K12	ENST00000267079	human	ensembl	74_37	-1	known	missense	c.381	p.D127E	1.000	pirsf_MAP3K12_MAP3K13,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K12	HGNC	ENSG00000139625				25	0	0	18	11	37.931
MYL6	0	genome.wustl.edu	37	12	56552184	56552184	+	RNA	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	56552184	56552184	A	G	SNP	MYL6	ENST00000550639	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.929	-	-	-	no_errors	MYL6	HGNC	ENSG00000092841				43	0	0	24	18	42.8571
LRP1	0	genome.wustl.edu	37	12	57572689	57572689	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	57572689	57572689	G	C	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.4623	p.E1541D	0.998	smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				142	0	0	89	63	41.4474
C1S	0	genome.wustl.edu	37	12	7170039	7170039	+	RNA	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	7170039	7170039	G	C	SNP	C1S	ENST00000543187	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	C1S	HGNC	ENSG00000182326				55	0	0	29	38	56.7164
NAV3	0	genome.wustl.edu	37	12	78415549	78415549	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	78415549	78415549	A	G	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.1930	p.T644A	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798				76	0	0	57	20	25.974
FOXJ2	0	genome.wustl.edu	37	12	8203212	8203212	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	8203212	8203212	C	T	SNP	FOXJ2	ENST00000162391	human	ensembl	74_37	+1	known	silent	c.1632	p.R544	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXJ2	HGNC	ENSG00000065970				98	0	0	131	36	21.5569
FAM155A	0	genome.wustl.edu	37	13	107822920	107822920	+	Silent	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	13	107822920	107822920	C	G	SNP	FAM155A	ENST00000375915	human	ensembl	74_37	-1	known	silent	c.1302	p.S434	0.000	NULL	NULL	-	no_errors	FAM155A	HGNC	ENSG00000204442				57	0	0	39	26	40
SACS	0	genome.wustl.edu	37	13	23930063	23930063	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	13	23930063	23930063	A	G	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.688	p.C230R	1.000	superfamily_HATPase_ATP-bd	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				64	0	0	32	23	41.8182
SLITRK5	0	genome.wustl.edu	37	13	88329791	88329791	+	Silent	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	13	88329791	88329791	G	C	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	silent	c.2148	p.V716	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				157	0	0	26	15	36.5854
SLITRK5	0	genome.wustl.edu	37	13	88329792	88329792	+	Missense_Mutation	SNP	T	T	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	13	88329792	88329792	T	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.2149	p.Y717N	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				154	0	0	26	10	27.7778
SLITRK5	0	genome.wustl.edu	37	13	88329835	88329835	+	Missense_Mutation	SNP	T	T	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	13	88329835	88329835	T	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.2192	p.V731E	0.995	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				186	0	0	35	6	14.6341
PSMA6	0	genome.wustl.edu	37	14	35778166	35778166	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	14	35778166	35778166	C	A	SNP	PSMA6	ENST00000261479	human	ensembl	74_37	+1	known	missense	c.218	p.T73N	1.000	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	-	no_errors	PSMA6	HGNC	ENSG00000100902				100	0	0	90	44	32.8358
FSCB	0	genome.wustl.edu	37	14	44975763	44975763	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	14	44975763	44975763	A	G	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.428	p.M143T	0.150	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139				207	0	0	132	77	36.8421
PYGL	0	genome.wustl.edu	37	14	51383422	51383422	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	14	51383422	51383422	C	T	SNP	PYGL	ENST00000216392	human	ensembl	74_37	-1	known	missense	c.1030	p.A344T	0.999	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGL	HGNC	ENSG00000100504				93	0	0	67	25	27.1739
UNC79	0	genome.wustl.edu	37	14	93944063	93944063	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	14	93944063	93944063	C	A	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	missense	c.608	p.P203Q	1.000	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				75	0	0	26	37	58.7302
UNC79	0	genome.wustl.edu	37	14	94071283	94071283	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	14	94071283	94071283	G	A	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	missense	c.3796	p.G1266S	1.000	superfamily_ARM-type_fold	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				11	0	0	6	4	40
NDN	0	genome.wustl.edu	37	15	23931799	23931799	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	15	23931799	23931799	C	T	SNP	NDN	ENST00000331837	human	ensembl	74_37	-1	known	missense	c.566	p.G189D	0.984	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	NDN	HGNC	ENSG00000182636				54	0	0	30	18	37.5
OCA2	0	genome.wustl.edu	37	15	28263631	28263631	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	15	28263631	28263631	C	A	SNP	OCA2	ENST00000354638	human	ensembl	74_37	-1	known	missense	c.719	p.G240V	0.000	NULL	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	-	no_errors	OCA2	HGNC	ENSG00000104044				39	0	0	17	20	54.0541
APBA2	0	genome.wustl.edu	37	15	29393862	29393862	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	15	29393862	29393862	G	T	SNP	APBA2	ENST00000558259	human	ensembl	74_37	+1	known	missense	c.1399	p.V467L	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA2	HGNC	ENSG00000034053				57	0	0	41	15	26.7857
GOLGA8H	0	genome.wustl.edu	37	15	30904854	30904854	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	15	30904854	30904854	C	A	SNP	GOLGA8H	ENST00000566740	human	ensembl	74_37	+1	novel	missense	c.1255	p.L419I	0.074	NULL	NULL	-	no_errors	GOLGA8H	HGNC	ENSG00000261794				16	0	0	4	4	50
VPS13C	0	genome.wustl.edu	37	15	62173134	62173134	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	15	62173134	62173134	G	A	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	nonsense	c.9796	p.Q3266*	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003				48	0	0	13	17	56.6667
IQGAP1	0	genome.wustl.edu	37	15	91020002	91020002	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	15	91020002	91020002	G	C	SNP	IQGAP1	ENST00000268182	human	ensembl	74_37	+1	known	missense	c.2892	p.E964D	1.000	NULL	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,pfam_WW_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_WW_dom,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP1	HGNC	ENSG00000140575				150	0	0	126	79	38.5366
TPSD1	0	genome.wustl.edu	37	16	1308365	1308365	+	Silent	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	1308365	1308365	G	C	SNP	TPSD1	ENST00000211076	human	ensembl	74_37	+1	known	silent	c.717	p.V239	0.415	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	TPSD1	HGNC	ENSG00000095917				134	0	0	66	38	36.5385
MYH11	0	genome.wustl.edu	37	16	15931924	15931924	+	Silent	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	15931924	15931924	C	A	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	silent	c.186	p.L62	1.000	pfam_Myosin_N,superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392				230	0	0	127	80	38.6473
CASKIN1	0	genome.wustl.edu	37	16	2236780	2236780	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	2236780	2236780	C	A	SNP	CASKIN1	ENST00000343516	human	ensembl	74_37	-1	known	missense	c.976	p.D326Y	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_SH3_domain,prints_Ankyrin_rpt	-	no_errors	CASKIN1	HGNC	ENSG00000167971				102	0	0	57	31	35.2273
SRRM2	0	genome.wustl.edu	37	16	2811985	2811985	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	2811985	2811985	A	G	SNP	SRRM2	ENST00000301740	human	ensembl	74_37	+1	known	missense	c.1456	p.S486G	0.999	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM2	HGNC	ENSG00000167978				123	0	0	55	24	30.3797
RNF40	0	genome.wustl.edu	37	16	30779423	30779423	+	Splice_Site	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	30779423	30779423	G	C	SNP	RNF40	ENST00000324685	human	ensembl	74_37	+1	known	splice_site	c.1552-1	e12-1	1.000	-	-	-	no_errors	RNF40	HGNC	ENSG00000103549				210	0	0	45	76	62.8099
DKFZP434H168	0	genome.wustl.edu	37	16	56226557	56226557	+	RNA	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	56226557	56226557	C	G	SNP	DKFZP434H168	ENST00000567381	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2050B12.2	Clone_based_vega_gene	ENSG00000261439				85	0	0	22	38	63.3333
CBFB	0	genome.wustl.edu	37	16	67100583	67100583	+	Splice_Site	SNP	A	A	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	67100583	67100583	A	C	SNP	CBFB	ENST00000290858	human	ensembl	74_37	+1	known	splice_site	c.283-2	e4-2	1.000	-	-	-	no_errors	CBFB	HGNC	ENSG00000067955				37	0	0	3	13	81.25
CLEC18B	0	genome.wustl.edu	37	16	74452141	74452141	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	74452141	74452141	A	G	SNP	CLEC18B	ENST00000339953	human	ensembl	74_37	-1	known	missense	c.272	p.I91T	0.002	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1	pfam_CAP_domain,pfam_C-type_lectin,superfamily_CAP_domain,superfamily_C-type_lectin_fold,smart_Allrgn_V5/Tpx1,smart_EG-like_dom,smart_C-type_lectin,pfscan_EG-like_dom,pfscan_C-type_lectin,prints_Allrgn_V5/Tpx1	-	no_errors	CLEC18B	HGNC	ENSG00000140839				41	0	0	12	2	14.2857
ADAD2	0	genome.wustl.edu	37	16	84229450	84229450	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	84229450	84229450	C	T	SNP	ADAD2	ENST00000268624	human	ensembl	74_37	+1	known	missense	c.1328	p.P443L	0.002	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD2	HGNC	ENSG00000140955				46	0	0	10	19	65.5172
ENSG00000205312	0	genome.wustl.edu	37	17	16752569	16752569	+	RNA	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	16752569	16752569	C	T	SNP	ENSG00000205312	ENST00000578037	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.707	-	-	-	no_errors	AC022596.2	Clone_based_vega_gene	ENSG00000205312				8	0	0	1	2	66.6667
SNORD3D	0	genome.wustl.edu	37	17	19015735	19015735	+	RNA	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	19015735	19015735	C	G	SNP	SNORD3D	ENST00000362793	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.087	-	-	-	no_errors	SNORD3D	HGNC	ENSG00000262202				37	0	0	32	8	20
C17orf103	0	genome.wustl.edu	37	17	21146671	21146671	+	Silent	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	21146671	21146671	G	T	SNP	C17orf103	ENST00000399011	human	ensembl	74_37	-1	known	silent	c.294	p.V98	1.000	superfamily_Acyl_CoA_acyltransferase	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C17orf103	HGNC	ENSG00000154035				102	0	0	111	6	5.12821
LRRC37A11P	0	genome.wustl.edu	37	17	37187738	37187738	+	RNA	SNP	A	A	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	37187738	37187738	A	C	SNP	LRRC37A11P	ENST00000425901	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	LRRC37A11P	HGNC	ENSG00000214553				175	0	0	119	62	34.2541
GSDMA	0	genome.wustl.edu	37	17	38128411	38128411	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	38128411	38128411	C	A	SNP	GSDMA	ENST00000301659	human	ensembl	74_37	+1	known	missense	c.685	p.Q229K	1.000	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMA	HGNC	ENSG00000167914				18	0	0	24	2	7.69231
KRT223P	0	genome.wustl.edu	37	17	38875296	38875296	+	RNA	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	38875296	38875296	C	G	SNP	KRT223P	ENST00000422957	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KRT223P	HGNC	ENSG00000229028				29	0	0	18	9	33.3333
KRTAP4-7	0	genome.wustl.edu	37	17	39240908	39240908	+	Silent	SNP	T	T	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	39240908	39240908	T	C	SNP	KRTAP4-7	ENST00000391417	human	ensembl	74_37	+1	known	silent	c.450	p.C150	0.002	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-7	HGNC	ENSG00000240871				15	0	0	12	4	25
KRTAP4-6	0	genome.wustl.edu	37	17	39296282	39296282	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	39296282	39296282	G	T	SNP	KRTAP4-6	ENST00000345847	human	ensembl	74_37	-1	known	missense	c.458	p.S153Y	0.000	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-6	HGNC	ENSG00000198090				106	1	0.934579	93	7	7
CNTNAP1	0	genome.wustl.edu	37	17	40847844	40847844	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	40847844	40847844	G	C	SNP	CNTNAP1	ENST00000264638	human	ensembl	74_37	+1	known	missense	c.3298	p.V1100L	0.998	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797				95	0	0	53	28	34.5679
SLC4A1	0	genome.wustl.edu	37	17	42340029	42340029	+	Silent	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	42340029	42340029	G	A	SNP	SLC4A1	ENST00000262418	human	ensembl	74_37	-1	known	silent	c.81	p.P27	0.000	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_1,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A1	HGNC	ENSG00000004939				32	0	0	18	13	41.9355
WNT9B	0	genome.wustl.edu	37	17	44954024	44954024	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	44954024	44954024	C	T	SNP	WNT9B	ENST00000290015	human	ensembl	74_37	+1	known	silent	c.1014	p.C338	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt	-	no_errors	WNT9B	HGNC	ENSG00000158955				90	0	0	38	14	26.9231
NPEPPS	0	genome.wustl.edu	37	17	45695716	45695716	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	45695716	45695716	C	G	SNP	NPEPPS	ENST00000322157	human	ensembl	74_37	+1	known	missense	c.2296	p.L766V	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	NPEPPS	HGNC	ENSG00000141279				32	0	0	22	17	43.5897
OSBPL7	0	genome.wustl.edu	37	17	45893948	45893948	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	45893948	45893948	G	C	SNP	OSBPL7	ENST00000007414	human	ensembl	74_37	-1	known	missense	c.909	p.F303L	1.000	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL7	HGNC	ENSG00000006025				37	0	0	11	8	42.1053
PSMB6	0	genome.wustl.edu	37	17	4701662	4701662	+	Missense_Mutation	SNP	T	T	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	4701662	4701662	T	A	SNP	PSMB6	ENST00000270586	human	ensembl	74_37	+1	known	missense	c.665	p.V222E	0.998	NULL	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB6	HGNC	ENSG00000142507				258	0	0	145	92	38.8186
PSMB6	0	genome.wustl.edu	37	17	4701676	4701676	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	4701676	4701676	C	T	SNP	PSMB6	ENST00000270586	human	ensembl	74_37	+1	known	nonsense	c.679	p.Q227*	1.000	NULL	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB6	HGNC	ENSG00000142507				238	0	0	138	88	38.9381
PDK2	0	genome.wustl.edu	37	17	48187386	48187386	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	48187386	48187386	G	T	SNP	PDK2	ENST00000503176	human	ensembl	74_37	+1	known	missense	c.1149	p.Q383H	1.000	NULL	pfam_BCDHK/PDK_N,pfam_HATPase_ATP-bd,superfamily_BCDHK/PDK_N,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pfscan_Sig_transdc_His_kinase_core	-	no_errors	PDK2	HGNC	ENSG00000005882				32	0	0	29	2	6.45161
KIF2B	0	genome.wustl.edu	37	17	51902390	51902390	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	51902390	51902390	C	T	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	missense	c.1996	p.L666F	0.283	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200				50	0	0	38	15	28.3019
MED13	0	genome.wustl.edu	37	17	60042586	60042586	+	Nonsense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	60042586	60042586	G	C	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	nonsense	c.4625	p.S1542*	0.995	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510				149	0	0	84	60	41.6667
KCNH6	0	genome.wustl.edu	37	17	61613061	61613061	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	61613061	61613061	C	T	SNP	KCNH6	ENST00000583023	human	ensembl	74_37	+1	known	missense	c.1133	p.A378V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_ELK,prints_2pore_dom_K_chnl,pfscan_cNMP-bd_dom	-	no_errors	KCNH6	HGNC	ENSG00000173826				116	1	0.854701	70	46	39.6552
MYOM1	0	genome.wustl.edu	37	18	3126706	3126706	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	18	3126706	3126706	G	A	SNP	MYOM1	ENST00000356443	human	ensembl	74_37	-1	known	missense	c.2984	p.A995V	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM1	HGNC	ENSG00000101605				33	0	0	17	10	37.037
ABCA7	0	genome.wustl.edu	37	19	1041564	1041564	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	1041564	1041564	C	G	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	missense	c.122	p.A41G	0.994	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687				119	0	0	97	41	29.7101
ZNF700	0	genome.wustl.edu	37	19	12060327	12060327	+	Silent	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	12060327	12060327	A	G	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	silent	c.1488	p.E496	0.241	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757				105	0	0	48	20	29.4118
RFX1	0	genome.wustl.edu	37	19	14104517	14104517	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	14104517	14104517	C	T	SNP	RFX1	ENST00000254325	human	ensembl	74_37	-1	known	missense	c.139	p.A47T	0.215	NULL	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX1	HGNC	ENSG00000132005				26	0	0	20	11	35.4839
BRD4	0	genome.wustl.edu	37	19	15367029	15367029	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	15367029	15367029	G	T	SNP	BRD4	ENST00000263377	human	ensembl	74_37	-1	known	missense	c.1597	p.Q533K	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD4	HGNC	ENSG00000141867				160	1	0.621118	91	45	33.0882
ZNF254	0	genome.wustl.edu	37	19	24310227	24310227	+	Silent	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	24310227	24310227	A	G	SNP	ZNF254	ENST00000357002	human	ensembl	74_37	+1	known	silent	c.1425	p.S475	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF254	HGNC	ENSG00000213096				83	0	0	46	25	35.2113
TSHZ3	0	genome.wustl.edu	37	19	31770079	31770079	+	Missense_Mutation	SNP	A	A	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	31770079	31770079	A	T	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	missense	c.620	p.I207N	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297				160	0	0	92	52	36.1111
GGN	0	genome.wustl.edu	37	19	38876924	38876924	+	Silent	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	38876924	38876924	G	A	SNP	GGN	ENST00000334928	human	ensembl	74_37	-1	known	silent	c.978	p.P326	0.002	NULL	NULL	-	no_errors	GGN	HGNC	ENSG00000179168				38	0	0	16	10	38.4615
LTBP4	0	genome.wustl.edu	37	19	41131900	41131900	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	41131900	41131900	C	T	SNP	LTBP4	ENST00000308370	human	ensembl	74_37	+1	known	missense	c.4169	p.P1390L	1.000	pfam_TB_dom,superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006				19	0	0	12	16	57.1429
CIC	0	genome.wustl.edu	37	19	42794003	42794003	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	42794003	42794003	A	G	SNP	CIC	ENST00000575354	human	ensembl	74_37	+1	known	missense	c.1364	p.D455G	0.990	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				25	0	0	12	8	40
PSG3	0	genome.wustl.edu	37	19	43233472	43233472	+	Missense_Mutation	SNP	T	T	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	43233472	43233472	T	G	SNP	PSG3	ENST00000327495	human	ensembl	74_37	-1	known	missense	c.1046	p.N349T	0.018	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG3	HGNC	ENSG00000221826				274	0	0	186	121	39.4137
FUT1	0	genome.wustl.edu	37	19	49254277	49254277	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	49254277	49254277	G	C	SNP	FUT1	ENST00000310160	human	ensembl	74_37	-1	known	missense	c.262	p.R88G	0.879	pfam_Glyco_trans_11	pfam_Glyco_trans_11	-	no_errors	FUT1	HGNC	ENSG00000174951				67	0	0	35	12	25.5319
POLD1	0	genome.wustl.edu	37	19	50906310	50906310	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	50906310	50906310	G	T	SNP	POLD1	ENST00000440232	human	ensembl	74_37	+1	known	missense	c.971	p.G324V	1.000	pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	-	no_errors	POLD1	HGNC	ENSG00000062822				10	0	0	5	4	44.4444
LOC101928780	0	genome.wustl.edu	37	19	54626994	54626994	+	RNA	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	54626994	54626994	G	T	SNP	LOC101928780	ENST00000452097	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC012314.8	Clone_based_vega_gene	ENSG00000237017				68	0	0	40	21	34.4262
UBE2S	0	genome.wustl.edu	37	19	55915847	55915847	+	Splice_Site	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	55915847	55915847	C	G	SNP	UBE2S	ENST00000264552	human	ensembl	74_37	-1	known	splice_site	c.152-1	e3-1	1.000	-	-	-	no_errors	UBE2S	HGNC	ENSG00000108106				37	0	0	18	9	33.3333
NLRP13	0	genome.wustl.edu	37	19	56410202	56410202	+	Missense_Mutation	SNP	A	A	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	56410202	56410202	A	C	SNP	NLRP13	ENST00000342929	human	ensembl	74_37	-1	known	missense	c.2891	p.L964R	0.003	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP13	HGNC	ENSG00000173572				116	0	0	82	54	39.7059
MUC16	0	genome.wustl.edu	37	19	8999536	8999536	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	8999536	8999536	C	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.40639	p.V13547L	0.010	pfam_SEA_dom,smart_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				192	0	0	115	58	33.526
MUC16	0	genome.wustl.edu	37	19	9090173	9090173	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	19	9090173	9090173	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.1642	p.P548T	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				82	0	0	41	30	42.2535
NOL10	0	genome.wustl.edu	37	2	10729750	10729750	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	10729750	10729750	C	T	SNP	NOL10	ENST00000381685	human	ensembl	74_37	-1	known	missense	c.1550	p.R517K	1.000	NULL	pfam_NUC153,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	NOL10	HGNC	ENSG00000115761				21	0	0	7	10	58.8235
RANBP2	0	genome.wustl.edu	37	2	109398786	109398786	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	109398786	109398786	C	G	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.8963	p.T2988S	1.000	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				74	0	0	57	28	32.9412
CNTNAP5	0	genome.wustl.edu	37	2	125504947	125504947	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	125504947	125504947	C	T	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.2216	p.A739V	0.997	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052				123	0	0	96	52	35.1351
POTEJ	0	genome.wustl.edu	37	2	131414793	131414793	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	131414793	131414793	C	T	SNP	POTEJ	ENST00000409602	human	ensembl	74_37	+1	novel	silent	c.2460	p.D820	0.998	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEJ	HGNC	ENSG00000222038				53	0	0	28	21	42.8571
ANKRD30BL	0	genome.wustl.edu	37	2	133015519	133015519	+	RNA	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	133015519	133015519	G	T	SNP	ANKRD30BL	ENST00000470729	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	ANKRD30BL	HGNC	ENSG00000163046				12	0	0	8	5	38.4615
CYTIP	0	genome.wustl.edu	37	2	158272554	158272554	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	158272554	158272554	G	A	SNP	CYTIP	ENST00000264192	human	ensembl	74_37	-1	known	nonsense	c.715	p.R239*	0.962	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	CYTIP	HGNC	ENSG00000115165				61	0	0	51	32	38.5542
ATP5G3	0	genome.wustl.edu	37	2	176046091	176046091	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	176046091	176046091	G	C	SNP	ATP5G3	ENST00000284727	human	ensembl	74_37	-1	known	missense	c.31	p.P11A	1.000	NULL	pfam_ATPase_proteolipid_c_like_dom,superfamily_ATPase_proteolipid_c_like_dom,prints_ATPase_F0-cplx_csu	-	no_errors	ATP5G3	HGNC	ENSG00000154518				24	0	0	24	12	33.3333
TFPI	0	genome.wustl.edu	37	2	188368450	188368450	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	188368450	188368450	A	G	SNP	TFPI	ENST00000233156	human	ensembl	74_37	-1	known	missense	c.46	p.C16R	0.007	pirsf_Prot_inhib_I2_TFPI	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	TFPI	HGNC	ENSG00000003436				69	0	0	41	30	42.2535
GULP1	0	genome.wustl.edu	37	2	189406025	189406025	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	189406025	189406025	G	T	SNP	GULP1	ENST00000359135	human	ensembl	74_37	+1	known	missense	c.379	p.V127L	1.000	pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	GULP1	HGNC	ENSG00000144366				72	0	0	39	22	36.0656
GULP1	0	genome.wustl.edu	37	2	189406027	189406027	+	Silent	SNP	A	A	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	189406027	189406027	A	T	SNP	GULP1	ENST00000359135	human	ensembl	74_37	+1	known	silent	c.381	p.V127	0.999	pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	GULP1	HGNC	ENSG00000144366				72	0	0	38	22	36.6667
STAT4	0	genome.wustl.edu	37	2	191922752	191922752	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	191922752	191922752	G	A	SNP	STAT4	ENST00000358470	human	ensembl	74_37	-1	known	nonsense	c.1198	p.R400*	1.000	pfam_STAT_TF_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,pfscan_SH2	-	no_errors	STAT4	HGNC	ENSG00000138378				52	0	0	33	17	34
DNAH7	0	genome.wustl.edu	37	2	196883950	196883950	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	196883950	196883950	C	G	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.813	p.L271F	0.999	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997				63	0	0	60	24	28.5714
SDC1	0	genome.wustl.edu	37	2	20403851	20403851	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	20403851	20403851	C	A	SNP	SDC1	ENST00000254351	human	ensembl	74_37	-1	known	missense	c.350	p.R117L	0.000	pfam_Syndecan/Neurexin_dom	pfam_Syndecan/Neurexin_dom,smart_Neurexin-like	-	no_errors	SDC1	HGNC	ENSG00000115884				121	0	0	71	39	35.4545
BIRC6	0	genome.wustl.edu	37	2	32728208	32728208	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	32728208	32728208	C	G	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	missense	c.9404	p.S3135C	1.000	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760				24	0	0	16	11	40.7407
SOS1	0	genome.wustl.edu	37	2	39213364	39213364	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	39213364	39213364	C	T	SNP	SOS1	ENST00000402219	human	ensembl	74_37	-1	known	silent	c.3603	p.R1201	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS1	HGNC	ENSG00000115904				132	0	0	89	43	32.5758
AHSA2	0	genome.wustl.edu	37	2	61413738	61413738	+	RNA	SNP	A	A	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	61413738	61413738	A	T	SNP	AHSA2	ENST00000491217	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	AHSA2	HGNC	ENSG00000173209				34	0	0	16	11	40.7407
ZNF638	0	genome.wustl.edu	37	2	71655661	71655661	+	RNA	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	71655661	71655661	G	T	SNP	ZNF638	ENST00000472758	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.799	-	-	-	no_errors	ZNF638	HGNC	ENSG00000075292				120	0	0	90	43	32.3308
TGOLN2	0	genome.wustl.edu	37	2	85554472	85554472	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	85554472	85554472	G	A	SNP	TGOLN2	ENST00000377386	human	ensembl	74_37	-1	known	missense	c.383	p.P128L	0.000	NULL	NULL	-	no_errors	TGOLN2	HGNC	ENSG00000152291				751	1	0.132979	446	308	40.8488
LOC654342	0	genome.wustl.edu	37	2	91816867	91816867	+	RNA	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	91816867	91816867	G	A	SNP	LOC654342	ENST00000608501	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	AC027612.6	Clone_based_vega_gene	ENSG00000143429				17	0	0	11	4	26.6667
ASAP2	0	genome.wustl.edu	37	2	9528481	9528481	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	9528481	9528481	A	G	SNP	ASAP2	ENST00000281419	human	ensembl	74_37	+1	known	missense	c.2189	p.Q730R	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP2	HGNC	ENSG00000151693				86	0	0	52	38	42.2222
CST9	0	genome.wustl.edu	37	20	23586247	23586247	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	20	23586247	23586247	C	T	SNP	CST9	ENST00000376971	human	ensembl	74_37	-1	known	silent	c.255	p.K85	0.086	pfam_Prot_inh_cystat	pfam_Prot_inh_cystat	-	no_errors	CST9	HGNC	ENSG00000173335				164	0	0	117	74	38.7435
NCOR1P1	0	genome.wustl.edu	37	20	26084094	26084094	+	RNA	SNP	T	T	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	20	26084094	26084094	T	C	SNP	NCOR1P1	ENST00000478176	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.667	-	-	-	no_errors	NCOR1P1	HGNC	ENSG00000240108				28	0	0	27	4	12.9032
TRPC4AP	0	genome.wustl.edu	37	20	33591321	33591321	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	20	33591321	33591321	C	T	SNP	TRPC4AP	ENST00000252015	human	ensembl	74_37	-1	known	silent	c.2148	p.E716	1.000	pfam_DUF3689	pfam_DUF3689	-	no_errors	TRPC4AP	HGNC	ENSG00000100991				111	0	0	58	22	27.5
CEP250	0	genome.wustl.edu	37	20	34079123	34079123	+	Missense_Mutation	SNP	A	A	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	20	34079123	34079123	A	C	SNP	CEP250	ENST00000397527	human	ensembl	74_37	+1	known	missense	c.2840	p.Q947P	0.994	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001				22	0	0	21	9	30
DLGAP4	0	genome.wustl.edu	37	20	35075102	35075102	+	Silent	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	20	35075102	35075102	A	G	SNP	DLGAP4	ENST00000339266	human	ensembl	74_37	+1	known	silent	c.1410	p.V470	0.064	NULL	pfam_GKAP	-	no_errors	DLGAP4	HGNC	ENSG00000080845				72	0	0	49	26	34.6667
KIAA1755	0	genome.wustl.edu	37	20	36841769	36841769	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	20	36841769	36841769	G	C	SNP	KIAA1755	ENST00000279024	human	ensembl	74_37	-1	known	missense	c.3278	p.P1093R	0.000	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	KIAA1755	HGNC	ENSG00000149633				20	0	0	13	6	31.5789
RBPJL	0	genome.wustl.edu	37	20	43940873	43940873	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	20	43940873	43940873	G	A	SNP	RBPJL	ENST00000343694	human	ensembl	74_37	+1	known	missense	c.457	p.A153T	1.000	pfam_LAG1_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJL	HGNC	ENSG00000124232				120	0	0	54	38	41.3043
KCNB1	0	genome.wustl.edu	37	20	48098857	48098857	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	20	48098857	48098857	C	T	SNP	KCNB1	ENST00000371741	human	ensembl	74_37	-1	known	missense	c.161	p.R54H	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv9	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.1,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB1	HGNC	ENSG00000158445				37	0	0	20	11	35.4839
MCM8	0	genome.wustl.edu	37	20	5963629	5963629	+	Silent	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	20	5963629	5963629	C	A	SNP	MCM8	ENST00000378886	human	ensembl	74_37	+1	known	silent	c.1671	p.I557	0.998	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM8	HGNC	ENSG00000125885				59	0	0	32	2	5.88235
SON	0	genome.wustl.edu	37	21	34924118	34924118	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	21	34924118	34924118	A	G	SNP	SON	ENST00000356577	human	ensembl	74_37	+1	known	missense	c.2581	p.M861V	1.000	superfamily_WD40_repeat_dom	pfam_G_patch_dom,superfamily_WD40_repeat_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_dsRNA-bd_dom	-	no_errors	SON	HGNC	ENSG00000159140				228	0	0	128	76	37.2549
MGAT3	0	genome.wustl.edu	37	22	39883695	39883695	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	22	39883695	39883695	G	A	SNP	MGAT3	ENST00000341184	human	ensembl	74_37	+1	known	missense	c.343	p.G115S	0.996	NULL	pfam_Glyco_trans_17	-	no_errors	MGAT3	HGNC	ENSG00000128268				46	0	0	12	12	50
EP300	0	genome.wustl.edu	37	22	41573651	41573651	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	22	41573651	41573651	A	G	SNP	EP300	ENST00000263253	human	ensembl	74_37	+1	known	missense	c.5936	p.H1979R	0.957	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC	ENSG00000100393				113	0	0	65	4	5.7971
CASR	0	genome.wustl.edu	37	3	122003879	122003879	+	Silent	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	3	122003879	122003879	C	T	SNP	CASR	ENST00000498619	human	ensembl	74_37	+1	known	silent	c.3108	p.T1036	0.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	CASR	HGNC	ENSG00000036828				109	0	0	59	39	39.7959
MYLK	0	genome.wustl.edu	37	3	123359146	123359146	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	3	123359146	123359146	C	T	SNP	MYLK	ENST00000360304	human	ensembl	74_37	-1	known	missense	c.4825	p.A1609T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	MYLK	HGNC	ENSG00000065534				111	0	0	76	34	30.9091
RPN1	0	genome.wustl.edu	37	3	128369586	128369586	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	3	128369586	128369586	C	G	SNP	RPN1	ENST00000296255	human	ensembl	74_37	-1	known	missense	c.58	p.A20P	0.022	NULL	pfam_Ribophorin_I	-	no_errors	RPN1	HGNC	ENSG00000163902				9	0	0	8	5	38.4615
DHX36	0	genome.wustl.edu	37	3	154024054	154024054	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	3	154024054	154024054	C	T	SNP	DHX36	ENST00000496811	human	ensembl	74_37	-1	known	missense	c.844	p.E282K	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX36	HGNC	ENSG00000174953				59	0	0	35	25	41.6667
CCR8	0	genome.wustl.edu	37	3	39374532	39374532	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	3	39374532	39374532	T	C	SNP	CCR8	ENST00000326306	human	ensembl	74_37	+1	known	missense	c.710	p.I237T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_CXCR4	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR8,prints_Chemokine_CXCR4,prints_Brdyknn_rcpt	-	no_errors	CCR8	HGNC	ENSG00000179934				84	0	0	40	30	42.8571
TLR9	0	genome.wustl.edu	37	3	52255985	52255985	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	3	52255985	52255985	C	T	SNP	TLR9	ENST00000597542	human	ensembl	74_37	-1	known	missense	c.2419	p.G807S	0.378	NULL	pfam_Leu-rich_rpt,pfam_TIR_dom,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR9	HGNC	ENSG00000239732				63	0	0	11	26	70.2703
LRTM1	0	genome.wustl.edu	37	3	54952777	54952777	+	Silent	SNP	A	A	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	3	54952777	54952777	A	T	SNP	LRTM1	ENST00000273286	human	ensembl	74_37	-1	known	silent	c.747	p.S249	0.022	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM1	HGNC	ENSG00000144771				49	0	0	30	15	33.3333
ANK2	0	genome.wustl.edu	37	4	114275995	114275995	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	4	114275995	114275995	G	T	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	missense	c.6221	p.G2074V	0.002	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				180	0	0	140	54	27.8351
MAML3	0	genome.wustl.edu	37	4	140811104	140811104	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	4	140811104	140811104	G	T	SNP	MAML3	ENST00000509479	human	ensembl	74_37	-1	known	missense	c.1486	p.Q496K	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML3	HGNC	ENSG00000196782				67	0	0	36	9	20
GPR125	0	genome.wustl.edu	37	4	22389842	22389842	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	4	22389842	22389842	A	G	SNP	GPR125	ENST00000334304	human	ensembl	74_37	-1	known	missense	c.3452	p.I1151T	0.999	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_GPCR_2_extracellular_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR125	HGNC	ENSG00000152990				91	0	0	54	33	37.931
LRPAP1	0	genome.wustl.edu	37	4	3521919	3521919	+	Silent	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	4	3521919	3521919	G	C	SNP	LRPAP1	ENST00000500728	human	ensembl	74_37	-1	known	silent	c.351	p.V117	0.998	pfam_MG_RAP_rcpt_1,superfamily_MG_RAP_rcpt_1	pfam_Alpha_2_MRAP_C,pfam_MG_RAP_rcpt_1,superfamily_MG_RAP_rcpt_1	-	no_errors	LRPAP1	HGNC	ENSG00000163956				81	0	0	46	15	24.5902
UGT2B17	0	genome.wustl.edu	37	4	69403579	69403579	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	4	69403579	69403579	G	C	SNP	UGT2B17	ENST00000317746	human	ensembl	74_37	-1	known	missense	c.1357	p.Q453E	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B17	HGNC	ENSG00000197888				175	0	0	105	70	40
AP3S1	0	genome.wustl.edu	37	5	115249114	115249114	+	Missense_Mutation	SNP	T	T	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	115249114	115249114	T	G	SNP	AP3S1	ENST00000316788	human	ensembl	74_37	+1	known	missense	c.509	p.L170R	1.000	NULL	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_AP_complex_ssu	-	no_errors	AP3S1	HGNC	ENSG00000177879				106	0	0	52	14	21.2121
PITX1	0	genome.wustl.edu	37	5	134369448	134369448	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	134369448	134369448	G	C	SNP	PITX1	ENST00000265340	human	ensembl	74_37	-1	known	missense	c.124	p.P42A	1.000	pirsf_Homeobox_Pitx/unc30	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PITX1	HGNC	ENSG00000069011				70	0	0	10	26	72.2222
DNAH5	0	genome.wustl.edu	37	5	13794139	13794139	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	13794139	13794139	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.7916	p.R2639Q	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				43	0	0	34	16	32
SLC26A2	0	genome.wustl.edu	37	5	149357287	149357287	+	Silent	SNP	A	A	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	149357287	149357287	A	C	SNP	SLC26A2	ENST00000286298	human	ensembl	74_37	+1	known	silent	c.72	p.P24	0.000	NULL	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A2	HGNC	ENSG00000155850				86	0	0	56	33	37.0787
PDGFRB	0	genome.wustl.edu	37	5	149510205	149510205	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	149510205	149510205	G	C	SNP	PDGFRB	ENST00000261799	human	ensembl	74_37	-1	known	missense	c.1264	p.L422V	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRB	HGNC	ENSG00000113721				254	0	0	129	78	37.6812
SOX30	0	genome.wustl.edu	37	5	157078924	157078924	+	Missense_Mutation	SNP	A	A	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	157078924	157078924	A	G	SNP	SOX30	ENST00000265007	human	ensembl	74_37	-1	known	missense	c.163	p.C55R	0.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX30	HGNC	ENSG00000039600				13	0	0	9	6	40
MYO10	0	genome.wustl.edu	37	5	16682101	16682101	+	Silent	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	16682101	16682101	G	A	SNP	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	silent	c.4068	p.I1356	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555				209	0	0	157	79	33.4746
WWC1	0	genome.wustl.edu	37	5	167798508	167798508	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	167798508	167798508	G	T	SNP	WWC1	ENST00000265293	human	ensembl	74_37	+1	known	missense	c.199	p.V67F	1.000	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	pfam_WW_dom,superfamily_C2_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWC1	HGNC	ENSG00000113645				47	0	0	41	25	37.8788
ENSG00000249854	0	genome.wustl.edu	37	5	20305818	20305818	+	RNA	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	20305818	20305818	C	T	SNP	ENSG00000249854	ENST00000513573	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.044	-	-	-	no_errors	RP11-420O16.1	Clone_based_vega_gene	ENSG00000249854				9	0	0	4	4	50
CDH6	0	genome.wustl.edu	37	5	31305332	31305332	+	Missense_Mutation	SNP	A	A	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	31305332	31305332	A	C	SNP	CDH6	ENST00000265071	human	ensembl	74_37	+1	known	missense	c.1051	p.N351H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH6	HGNC	ENSG00000113361				85	0	0	60	35	36.8421
OXCT1	0	genome.wustl.edu	37	5	41850261	41850261	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	41850261	41850261	G	C	SNP	OXCT1	ENST00000196371	human	ensembl	74_37	-1	known	missense	c.435	p.I145M	1.000	pfam_CoA_trans_fam_I,smart_CoA_trans_fam_I,pirsf_3-oxoacid_CoA-transferase,tigrfam_3-oxoacid_CoA-transf_A	pfam_CoA_trans_fam_I,smart_CoA_trans_fam_I,pirsf_3-oxoacid_CoA-transferase,tigrfam_3-oxoacid_CoA-transf_B,tigrfam_3-oxoacid_CoA-transf_A	-	no_errors	OXCT1	HGNC	ENSG00000083720				45	0	0	28	16	36.3636
ADAMTS16	0	genome.wustl.edu	37	5	5191803	5191803	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	5191803	5191803	G	T	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	missense	c.1213	p.A405S	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536				65	0	0	39	29	42.6471
TRIM23	0	genome.wustl.edu	37	5	64890371	64890371	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	64890371	64890371	G	A	SNP	TRIM23	ENST00000231524	human	ensembl	74_37	-1	known	missense	c.1522	p.L508F	1.000	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_MIRO-like,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_MIRO-like,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,pfam_Znf_B-box,superfamily_P-loop_NTPase,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,smart_Small_GTPase_Rab_type,pfscan_Znf_B-box,pfscan_Znf_RING,pfscan_Znf_C2H2,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	TRIM23	HGNC	ENSG00000113595				101	0	0	56	33	37.0787
SV2C	0	genome.wustl.edu	37	5	75621291	75621291	+	Silent	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	75621291	75621291	C	A	SNP	SV2C	ENST00000502798	human	ensembl	74_37	+1	known	silent	c.2103	p.I701	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2C	HGNC	ENSG00000122012				106	0	0	53	49	48.0392
LHFPL2	0	genome.wustl.edu	37	5	77784944	77784944	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	77784944	77784944	G	C	SNP	LHFPL2	ENST00000380345	human	ensembl	74_37	-1	known	missense	c.463	p.P155A	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL2	HGNC	ENSG00000145685				153	0	0	125	56	30.9392
RGMB	0	genome.wustl.edu	37	5	98128788	98128788	+	Splice_Site	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	5	98128788	98128788	G	C	SNP	RGMB	ENST00000308234	human	ensembl	74_37	+1	known	splice_site	c.769-1	e4-1	1.000	-	-	-	no_errors	RGMB	HGNC	ENSG00000174136				50	0	0	9	5	35.7143
LAMA4	0	genome.wustl.edu	37	6	112486373	112486373	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	112486373	112486373	C	G	SNP	LAMA4	ENST00000230538	human	ensembl	74_37	-1	known	missense	c.1657	p.D553H	1.000	pfam_Laminin_I	pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_II,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Focal_adhesion_kin_target_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Laminin_G	-	no_errors	LAMA4	HGNC	ENSG00000112769				66	0	0	63	31	32.9787
LAMA2	0	genome.wustl.edu	37	6	129725052	129725052	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	129725052	129725052	C	T	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	missense	c.5813	p.A1938V	1.000	NULL	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569				57	0	0	59	27	31.3953
HLA-F	0	genome.wustl.edu	37	6	29691903	29691903	+	RNA	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	29691903	29691903	G	C	SNP	HLA-F	ENST00000485513	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	HLA-F	HGNC	ENSG00000204642				22	0	0	2	9	81.8182
MDFI	0	genome.wustl.edu	37	6	41621105	41621105	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	41621105	41621105	C	T	SNP	MDFI	ENST00000230321	human	ensembl	74_37	+1	known	missense	c.533	p.T178M	1.000	NULL	NULL	-	no_errors	MDFI	HGNC	ENSG00000112559				183	0	0	138	45	24.5902
ABCC10	0	genome.wustl.edu	37	6	43400111	43400111	+	Silent	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	43400111	43400111	G	C	SNP	ABCC10	ENST00000372530	human	ensembl	74_37	+1	known	silent	c.393	p.R131	0.921	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC10	HGNC	ENSG00000124574				78	0	0	46	32	41.0256
LRRC73	0	genome.wustl.edu	37	6	43477513	43477513	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	43477513	43477513	C	T	SNP	LRRC73	ENST00000372441	human	ensembl	74_37	-1	novel	missense	c.11	p.S4N	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC73	HGNC	ENSG00000204052				33	0	0	20	17	45.9459
TDRD6	0	genome.wustl.edu	37	6	46658067	46658067	+	Silent	SNP	T	T	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	46658067	46658067	T	G	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	silent	c.2202	p.T734	0.000	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113				62	0	0	27	20	42.5532
BAI3	0	genome.wustl.edu	37	6	69685130	69685130	+	Silent	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	69685130	69685130	C	A	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	silent	c.1632	p.T544	1.000	smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,prints_GPCR_2_brain-spec_angio_inhib	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				47	0	0	43	17	28.3333
FILIP1	0	genome.wustl.edu	37	6	76063347	76063347	+	Silent	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	76063347	76063347	G	T	SNP	FILIP1	ENST00000237172	human	ensembl	74_37	-1	known	silent	c.537	p.T179	0.001	pfam_Cortactin-binding_p2_N	pfam_Cortactin-binding_p2_N,prints_Tropomyosin	-	no_errors	FILIP1	HGNC	ENSG00000118407				142	0	0	95	114	54.5455
CNR1	0	genome.wustl.edu	37	6	88853985	88853985	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	88853985	88853985	T	C	SNP	CNR1	ENST00000369499	human	ensembl	74_37	-1	known	missense	c.1009	p.M337V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Cnbnoid_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Canbinoid_rcpt_1,prints_Cnbnoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CNR1	HGNC	ENSG00000118432				158	0	0	20	44	68.75
BMPER	0	genome.wustl.edu	37	7	34118785	34118785	+	Silent	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	7	34118785	34118785	G	C	SNP	BMPER	ENST00000297161	human	ensembl	74_37	+1	known	silent	c.1395	p.V465	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_VWF_C,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_C,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,pfscan_VWF_C	-	no_errors	BMPER	HGNC	ENSG00000164619				140	0	0	85	60	41.3793
PKD1L1	0	genome.wustl.edu	37	7	47894499	47894499	+	Missense_Mutation	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	7	47894499	47894499	G	T	SNP	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	missense	c.4840	p.P1614T	0.994	NULL	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683				107	0	0	110	40	26.6667
TONSL	0	genome.wustl.edu	37	8	145655822	145655822	+	Missense_Mutation	SNP	T	T	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	8	145655822	145655822	T	C	SNP	TONSL	ENST00000409379	human	ensembl	74_37	-1	known	missense	c.3908	p.K1303R	0.006	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TONSL	HGNC	ENSG00000160949				49	0	0	42	15	26.3158
ADAM28	0	genome.wustl.edu	37	8	24170996	24170996	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	8	24170996	24170996	C	T	SNP	ADAM28	ENST00000265769	human	ensembl	74_37	+1	known	missense	c.479	p.P160L	0.009	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM28	HGNC	ENSG00000042980				105	0	0	72	55	43.3071
ADRA1A	0	genome.wustl.edu	37	8	26722311	26722311	+	Missense_Mutation	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	8	26722311	26722311	G	A	SNP	ADRA1A	ENST00000380586	human	ensembl	74_37	-1	known	missense	c.176	p.S59L	0.999	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA1A_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRA1A	HGNC	ENSG00000120907				543	0	0	349	197	36.0806
TEX15	0	genome.wustl.edu	37	8	30703031	30703031	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	8	30703031	30703031	G	C	SNP	TEX15	ENST00000256246	human	ensembl	74_37	-1	known	missense	c.3503	p.S1168C	0.684	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863				45	0	0	34	12	26.087
WWP1	0	genome.wustl.edu	37	8	87454884	87454884	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	8	87454884	87454884	C	A	SNP	WWP1	ENST00000265428	human	ensembl	74_37	+1	known	missense	c.1875	p.N625K	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	WWP1	HGNC	ENSG00000123124				25	0	0	8	8	50
CRB2	0	genome.wustl.edu	37	9	126132605	126132605	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	126132605	126132605	C	T	SNP	CRB2	ENST00000373631	human	ensembl	74_37	+1	known	missense	c.1273	p.H425Y	0.877	superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	CRB2	HGNC	ENSG00000148204				87	0	0	42	29	40.8451
COQ4	0	genome.wustl.edu	37	9	131095013	131095013	+	RNA	SNP	A	A	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	131095013	131095013	A	C	SNP	COQ4	ENST00000461102	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	COQ4	HGNC	ENSG00000167113				30	0	0	20	21	51.2195
SET	0	genome.wustl.edu	37	9	131455034	131455034	+	Missense_Mutation	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	131455034	131455034	G	C	SNP	SET	ENST00000372692	human	ensembl	74_37	+1	known	missense	c.407	p.R136T	1.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	SET	HGNC	ENSG00000119335				44	0	0	25	18	41.8605
SNAPC4	0	genome.wustl.edu	37	9	139273164	139273164	+	Nonsense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	139273164	139273164	C	A	SNP	SNAPC4	ENST00000298532	human	ensembl	74_37	-1	known	nonsense	c.3115	p.E1039*	0.003	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC	ENSG00000165684				20	0	0	6	6	50
SEC16A	0	genome.wustl.edu	37	9	139357381	139357381	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	139357381	139357381	C	G	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	missense	c.4851	p.E1617D	0.357	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396				102	0	0	40	40	50
RLN2	0	genome.wustl.edu	37	9	5304475	5304475	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	5304475	5304475	C	G	SNP	RLN2	ENST00000381627	human	ensembl	74_37	-1	known	missense	c.106	p.G36R	0.010	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Insulin_family	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Relaxin,prints_Insulin_family	-	no_errors	RLN2	HGNC	ENSG00000107014				102	0	0	163	52	24.186
LOC100996870	0	genome.wustl.edu	37	9	66459908	66459908	+	RNA	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	66459908	66459908	C	G	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.068	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				17	0	0	16	3	15.7895
LOC100996870	0	genome.wustl.edu	37	9	66466365	66466365	+	RNA	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	66466365	66466365	C	A	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				10	0	0	3	3	50
SPATA31E1	0	genome.wustl.edu	37	9	90500146	90500146	+	Silent	SNP	G	G	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	90500146	90500146	G	C	SNP	SPATA31E1	ENST00000325643	human	ensembl	74_37	+1	known	silent	c.744	p.P248	0.002	NULL	NULL	-	no_errors	SPATA31E1	HGNC	ENSG00000177992				235	0	0	150	16	9.63855
SPATA31E1	0	genome.wustl.edu	37	9	90500153	90500153	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	90500153	90500153	C	A	SNP	SPATA31E1	ENST00000325643	human	ensembl	74_37	+1	known	missense	c.751	p.P251T	0.001	NULL	NULL	-	no_errors	SPATA31E1	HGNC	ENSG00000177992				223	0	0	137	16	10.4575
FGD3	0	genome.wustl.edu	37	9	95738970	95738970	+	Missense_Mutation	SNP	C	C	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	95738970	95738970	C	A	SNP	FGD3	ENST00000337352	human	ensembl	74_37	+1	known	missense	c.432	p.D144E	0.000	superfamily_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD3	HGNC	ENSG00000127084				62	0	0	25	9	26.4706
PTPDC1	0	genome.wustl.edu	37	9	96860706	96860706	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	96860706	96860706	C	G	SNP	PTPDC1	ENST00000375360	human	ensembl	74_37	+1	known	missense	c.1696	p.Q566E	0.002	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	PTPDC1	HGNC	ENSG00000158079				159	0	0	107	52	32.7044
DRP2	0	genome.wustl.edu	37	X	100492725	100492725	+	Silent	SNP	G	G	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	X	100492725	100492725	G	T	SNP	DRP2	ENST00000395209	human	ensembl	74_37	+1	known	silent	c.399	p.G133	1.000	smart_Spectrin/alpha-actinin,pirsf_Dystrophin-related_2	pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_Znf_ZZ,pfam_Spectrin_repeat,pfam_WW_dom,superfamily_WW_dom,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin-related_2,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DRP2	HGNC	ENSG00000102385				91	0	0	12	60	83.3333
ARMCX6	0	genome.wustl.edu	37	X	100871542	100871542	+	Silent	SNP	G	G	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	X	100871542	100871542	G	A	SNP	ARMCX6	ENST00000361910	human	ensembl	74_37	-1	known	silent	c.69	p.C23	0.856	NULL	pfam_ARM-rpt_dom	-	no_errors	ARMCX6	HGNC	ENSG00000198960				61	0	0	14	46	76.6667
RGAG1	0	genome.wustl.edu	37	X	109696087	109696087	+	Missense_Mutation	SNP	T	T	A			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	X	109696087	109696087	T	A	SNP	RGAG1	ENST00000465301	human	ensembl	74_37	+1	known	missense	c.2242	p.S748T	0.000	NULL	NULL	-	no_errors	RGAG1	HGNC	ENSG00000243978				87	0	0	15	60	80
CD40LG	0	genome.wustl.edu	37	X	135741371	135741371	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	X	135741371	135741371	C	G	SNP	CD40LG	ENST00000370629	human	ensembl	74_37	+1	known	missense	c.583	p.L195V	0.996	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pirsf_TNF_ligand_5,pfscan_TNF_dom	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pirsf_TNF_ligand_5,pfscan_TNF_dom,prints_TNF_ligand_5	-	no_errors	CD40LG	HGNC	ENSG00000102245				246	0	0	57	190	76.9231
CXorf40A	0	genome.wustl.edu	37	X	148627250	148627250	+	Missense_Mutation	SNP	C	C	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	X	148627250	148627250	C	T	SNP	CXorf40A	ENST00000359293	human	ensembl	74_37	+1	known	missense	c.74	p.T25M	0.960	superfamily_PUA-like_domain	superfamily_PUA-like_domain	-	no_errors	CXorf40A	HGNC	ENSG00000197620				53	0	0	7	29	80.5556
CXorf22	0	genome.wustl.edu	37	X	35984819	35984819	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	X	35984819	35984819	C	G	SNP	CXorf22	ENST00000297866	human	ensembl	74_37	+1	known	missense	c.1548	p.F516L	0.670	NULL	superfamily_PapD-like	-	no_errors	CXorf22	HGNC	ENSG00000165164				37	0	0	18	27	60
UPRT	0	genome.wustl.edu	37	X	74519690	74519690	+	Missense_Mutation	SNP	A	A	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	X	74519690	74519690	A	T	SNP	UPRT	ENST00000373383	human	ensembl	74_37	+1	known	missense	c.683	p.D228V	1.000	pfam_PRibTrfase_dom	pfam_PRibTrfase_dom	-	no_errors	UPRT	HGNC	ENSG00000094841				88	0	0	17	66	79.5181
RPS4Y2	0	genome.wustl.edu	37	Y	22930849	22930849	+	Missense_Mutation	SNP	C	C	G			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	Y	22930849	22930849	C	G	SNP	RPS4Y2	ENST00000288666	human	ensembl	74_37	+1	known	missense	c.519	p.I173M	1.000	pirsf_Ribosomal_S4e	pfam_Ribosomal_S4e_central_region,pfam_Ribosomal_S4e_N,pfam_KOW,pirsf_Ribosomal_S4e,pfscan_S4_RNA-bd	-	no_errors	RPS4Y2	HGNC	ENSG00000157828				32	0	0	7	15	68.1818
CCNL2	0	genome.wustl.edu	37	1	1328771	1328804	+	Frame_Shift_Del	DEL	CTCACCATGAGGTCTGGACCAGGTGTTGGTTACG	CTCACCATGAGGTCTGGACCAGGTGTTGGTTACG	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	CTCACCATGAGGTCTGGACCAGGTGTTGGTTACG	CTCACCATGAGGTCTGGACCAGGTGTTGGTTACG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	1328771	1328804	CTCACCATGAGGTCTGGACCAGGTGTTGGTTACG	-	DEL	CCNL2	ENST00000400809	human	ensembl	74_37	-1	known	frame_shift_del	c.664_631	p.R211fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.908:0.037:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.997:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	-	no_errors	CCNL2	HGNC	ENSG00000221978				153	0	0	31	7	18.4211
JAK1	0	genome.wustl.edu	37	1	65339110	65339111	+	Frame_Shift_Ins	INS	-	-	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	1	65339110	65339111	-	T	INS	JAK1	ENST00000342505	human	ensembl	74_37	-1	known	frame_shift_ins	c.426_425	p.I143fs	1.000:1.000	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak1,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	JAK1	HGNC	ENSG00000162434				76	0	0	22	31	58.4906
DMBT1	0	genome.wustl.edu	37	10	124396810	124396818	+	In_Frame_Del	DEL	CTGCGGCAC	CTGCGGCAC	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	CTGCGGCAC	CTGCGGCAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	10	124396810	124396818	CTGCGGCAC	-	DEL	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	in_frame_del	c.6537_6545	p.CGT2180in_frame_del	0.989:1.000:1.000:0.934:0.980:0.995:0.991:0.996:0.978	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908				18	0	0	3	2	40
WNT1	0	genome.wustl.edu	37	12	49373285	49373285	+	Frame_Shift_Del	DEL	C	C	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	12	49373285	49373285	C	-	DEL	WNT1	ENST00000293549	human	ensembl	74_37	+1	known	frame_shift_del	c.139	p.T48fs	1.000	NULL	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt1	-	no_errors	WNT1	HGNC	ENSG00000125084				194	0	0	154	47	23.3831
RBM26	0	genome.wustl.edu	37	13	79918806	79918807	+	Frame_Shift_Ins	INS	-	-	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	13	79918806	79918807	-	T	INS	RBM26	ENST00000438724	human	ensembl	74_37	-1	known	frame_shift_ins	c.2110_2109	p.Q703fs	1.000:1.000	NULL	pfam_PWI_dom,superfamily_PWI_dom,smart_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM26	HGNC	ENSG00000139746				40	0	0	43	3	6.52174
FAM181A	0	genome.wustl.edu	37	14	94395422	94395423	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	14	94395422	94395423	AG	-	DEL	FAM181A	ENST00000267594	human	ensembl	74_37	+1	known	frame_shift_del	c.977_978	p.K327fs	1.000:0.999	NULL	NULL	-	no_errors	FAM181A	HGNC	ENSG00000140067				100	0	0	22	24	52.1739
ZFHX3	0	genome.wustl.edu	37	16	73092817	73092818	+	RNA	INS	-	-	GGC			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	73092817	73092818	-	GGC	INS	ZFHX3	ENST00000558842	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ZFHX3	HGNC	ENSG00000140836				9	0	0	5	3	37.5
BCMO1	0	genome.wustl.edu	37	16	81303874	81303888	+	In_Frame_Del	DEL	CATCGTGTTTGACGT	CATCGTGTTTGACGT	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	CATCGTGTTTGACGT	CATCGTGTTTGACGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	16	81303874	81303888	CATCGTGTTTGACGT	-	DEL	BCMO1	ENST00000258168	human	ensembl	74_37	+1	known	in_frame_del	c.954_968	p.VFDVI320in_frame_del	0.948:0.893:0.903:0.067:0.136:0.961:0.958:0.998:1.000:0.988:1.000:0.998:0.170:0.860:0.974	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	BCMO1	HGNC	ENSG00000135697				140	0	0	26	32	55.1724
NFE2L1	0	genome.wustl.edu	37	17	46134756	46134757	+	Frame_Shift_Ins	INS	-	-	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	17	46134756	46134757	-	C	INS	NFE2L1	ENST00000362042	human	ensembl	74_37	+1	known	frame_shift_ins	c.864_865	p.A290fs	1.000:1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L1	HGNC	ENSG00000082641				174	0	0	112	45	28.6624
SMCHD1	0	genome.wustl.edu	37	18	2763719	2763723	+	Frame_Shift_Del	DEL	ACCCC	ACCCC	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	ACCCC	ACCCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	18	2763719	2763723	ACCCC	-	DEL	SMCHD1	ENST00000320876	human	ensembl	74_37	+1	known	frame_shift_del	c.4651_4655	p.P1552fs	0.953:0.937:0.923:1.000:1.000	NULL	pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_HATPase_ATP-bd,smart_SMC_hinge	-	no_errors	SMCHD1	HGNC	ENSG00000101596				46	0	0	23	6	20.6897
TTN	0	genome.wustl.edu	37	2	179437941	179437941	+	Frame_Shift_Del	DEL	A	A	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	179437941	179437941	A	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.65214	p.S21738fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				117	0	0	73	39	34.8214
TTN	0	genome.wustl.edu	37	2	179571225	179571250	+	Frame_Shift_Del	DEL	CTTCCTTTCATCCACCTGTAAGTTAA	CTTCCTTTCATCCACCTGTAAGTTAA	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	CTTCCTTTCATCCACCTGTAAGTTAA	CTTCCTTTCATCCACCTGTAAGTTAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	179571225	179571250	CTTCCTTTCATCCACCTGTAAGTTAA	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.25644_25619	p.V8540fs	1.000:1.000:1.000:1.000:1.000:1.000:0.999:1.000:1.000:0.731:1.000:1.000:1.000:1.000:1.000:0.991:1.000:1.000:0.958:1.000:0.999:1.000:1.000:1.000:0.984:1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				71	0	0	38	14	26.9231
ZNF804A	0	genome.wustl.edu	37	2	185803454	185803471	+	In_Frame_Del	DEL	GCAGCTGCAGCTGCAGCC	GCAGCTGCAGCTGCAGCC	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	GCAGCTGCAGCTGCAGCC	GCAGCTGCAGCTGCAGCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	185803454	185803471	GCAGCTGCAGCTGCAGCC	-	DEL	ZNF804A	ENST00000302277	human	ensembl	74_37	+1	known	in_frame_del	c.3331_3348	p.AAAAAA1114in_frame_del	0.533:0.573:0.448:0.745:0.734:0.027:0.048:0.046:0.015:0.028:0.030:0.001:0.106:0.109:0.047:0.054:0.047:0.003	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804A	HGNC	ENSG00000170396				121	0	0	72	30	29.4118
ZNF804A	0	genome.wustl.edu	37	2	185803466	185803468	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	185803466	185803468	GCA	-	DEL	ZNF804A	ENST00000302277	human	ensembl	74_37	+1	known	in_frame_del	c.3343_3345	p.A1118in_frame_del	0.106:0.109:0.047	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804A	HGNC	ENSG00000170396				122	0	0	73	29	28.4314
FAM171B	0	genome.wustl.edu	37	2	187627259	187627264	+	In_Frame_Del	DEL	GCATCA	GCATCA	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	GCATCA	GCATCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	187627259	187627264	GCATCA	-	DEL	FAM171B	ENST00000304698	human	ensembl	74_37	+1	known	in_frame_del	c.2190_2195	p.HQ731in_frame_del	1.000:1.000:1.000:0.998:1.000:1.000	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171B	HGNC	ENSG00000144369				112	0	0	67	30	30.9278
CASP8	0	genome.wustl.edu	37	2	202151284	202151295	+	In_Frame_Del	DEL	ACTAAGAAAAAA	ACTAAGAAAAAA	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	ACTAAGAAAAAA	ACTAAGAAAAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	202151284	202151295	ACTAAGAAAAAA	-	DEL	CASP8	ENST00000358485	human	ensembl	74_37	+1	known	in_frame_del	c.1584_1595	p.RKKL530in_frame_del	0.489:0.986:0.987:0.325:0.325:0.304:0.061:0.995:1.000:1.000:1.000:0.967	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_p10	pfam_DED,pfam_Pept_C14_caspase,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012				58	0	0	31	9	22.5
SPTBN1	0	genome.wustl.edu	37	2	54864881	54864881	+	Frame_Shift_Del	DEL	C	C	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	2	54864881	54864881	C	-	DEL	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	frame_shift_del	c.3799	p.L1267fs	1.000	pirsf_Spectrin_bsu,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306				77	0	0	71	18	20.2247
ZNF148	0	genome.wustl.edu	37	3	124952748	124952748	+	Frame_Shift_Del	DEL	T	T	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	3	124952748	124952748	T	-	DEL	ZNF148	ENST00000360647	human	ensembl	74_37	-1	known	frame_shift_del	c.822	p.K274fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF148	HGNC	ENSG00000163848				62	0	0	57	24	29.6296
N4BP2	0	genome.wustl.edu	37	4	40104250	40104253	+	Frame_Shift_Del	DEL	TCAA	TCAA	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	TCAA	TCAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	4	40104250	40104253	TCAA	-	DEL	N4BP2	ENST00000261435	human	ensembl	74_37	+1	known	frame_shift_del	c.785_788	p.N263fs	0.000:0.000:0.000:0.000	NULL	pfam_DUF1771,pfam_Smr/MutS2_C,superfamily_P-loop_NTPase,superfamily_UBA-like,smart_Smr/MutS2_C,pfscan_CUE,pfscan_Smr/MutS2_C	-	no_errors	N4BP2	HGNC	ENSG00000078177				60	0	0	46	19	29.2308
ENSG00000227304	0	genome.wustl.edu	37	4	83416685	83416686	+	RNA	INS	-	-	T			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	4	83416685	83416686	-	T	INS	ENSG00000227304	ENST00000488045	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.927:0.914	-	-	-	no_errors	RP11-791G16.2	Clone_based_vega_gene	ENSG00000227304				10	0	0	9	5	35.7143
SEC63	0	genome.wustl.edu	37	6	108214774	108214774	+	Frame_Shift_Del	DEL	T	T	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	108214774	108214774	T	-	DEL	SEC63	ENST00000369002	human	ensembl	74_37	-1	known	frame_shift_del	c.1586	p.K529fs	1.000	superfamily_ARM-type_fold,smart_Sec63-dom	pfam_Sec63-dom,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_ARM-type_fold,smart_DnaJ_domain,smart_Sec63-dom,prints_DnaJ_domain,pfscan_DnaJ_domain	-	no_errors	SEC63	HGNC	ENSG00000025796				65	0	0	125	7	5.30303
HIVEP1	0	genome.wustl.edu	37	6	12121963	12121978	+	Frame_Shift_Del	DEL	GCTACAAAGGCAGCAG	GCTACAAAGGCAGCAG	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	GCTACAAAGGCAGCAG	GCTACAAAGGCAGCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	12121963	12121978	GCTACAAAGGCAGCAG	-	DEL	HIVEP1	ENST00000379388	human	ensembl	74_37	+1	known	frame_shift_del	c.1935_1950	p.Q647fs	0.979:1.000:1.000:0.000:1.000:1.000:0.773:0.997:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP1	HGNC	ENSG00000095951				101	0	0	77	13	14.4444
TFB1M	0	genome.wustl.edu	37	6	155635281	155635282	+	RNA	INS	-	-	TTC			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	6	155635281	155635282	-	TTC	INS	TFB1M	ENST00000466349	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.000	-	-	-	no_errors	TFB1M	HGNC	ENSG00000029639				10	0	0	5	7	58.3333
KMT2C	0	genome.wustl.edu	37	7	151873650	151873657	+	Frame_Shift_Del	DEL	CGGCCAGG	CGGCCAGG	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	CGGCCAGG	CGGCCAGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	7	151873650	151873657	CGGCCAGG	-	DEL	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	frame_shift_del	c.8888_8881	p.P2961fs	0.021:0.813:0.791:0.992:0.993:0.950:0.937:0.343	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				41	0	0	23	13	36.1111
KMT2C	0	genome.wustl.edu	37	7	151873654	151873657	+	Frame_Shift_Del	DEL	CAGG	CAGG	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	CAGG	CAGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	7	151873654	151873657	CAGG	-	DEL	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	frame_shift_del	c.8884_8881	p.P2961fs	0.993:0.950:0.937:0.343	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				41	0	0	23	13	36.1111
KMT2C	0	genome.wustl.edu	37	7	151873656	151873657	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	7	151873656	151873657	GG	-	DEL	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	frame_shift_del	c.8882_8881	p.P2961fs	0.937:0.343	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				41	0	0	23	13	36.1111
HSF1	0	genome.wustl.edu	37	8	145532648	145532662	+	In_Frame_Del	DEL	CAAGTACTTCAAGCA	CAAGTACTTCAAGCA	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	CAAGTACTTCAAGCA	CAAGTACTTCAAGCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	8	145532648	145532662	CAAGTACTTCAAGCA	-	DEL	HSF1	ENST00000528838	human	ensembl	74_37	+1	known	in_frame_del	c.174_188	p.KYFKH59in_frame_del	0.997:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	pfam_HSF_DNA-bd,smart_HSF_DNA-bd,prints_HSF_DNA-bd	pfam_Vert_HSTF_C,pfam_HSF_DNA-bd,smart_HSF_DNA-bd,prints_HSF_DNA-bd	-	no_errors	HSF1	HGNC	ENSG00000185122				120	0	0	157	20	11.2994
C8orf33	0	genome.wustl.edu	37	8	146278248	146278248	+	Frame_Shift_Del	DEL	G	G	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	8	146278248	146278248	G	-	DEL	C8orf33	ENST00000331434	human	ensembl	74_37	+1	known	frame_shift_del	c.283	p.A95fs	0.003	NULL	NULL	-	no_errors	C8orf33	HGNC	ENSG00000182307				56	0	0	45	12	21.0526
ABCA1	0	genome.wustl.edu	37	9	107553269	107553276	+	Frame_Shift_Del	DEL	GATGATTT	GATGATTT	-			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	GATGATTT	GATGATTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	9	107553269	107553276	GATGATTT	-	DEL	ABCA1	ENST00000374736	human	ensembl	74_37	-1	known	frame_shift_del	c.5861_5854	p.K1952fs	1.000:1.000:0.990:1.000:1.000:0.993:1.000:1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA1	HGNC	ENSG00000165029				115	0	0	64	7	9.85915
MT-ND5	0	genome.wustl.edu	37	MT	12384	12385	+	Frame_Shift_Ins	INS	-	-	C			TCGA-EQ-A4SO-01A-11D-A25D-08	TCGA-EQ-A4SO-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	150bfa0c-8ae2-4735-acd2-5bb2335b6e21	589cddca-4530-41cd-a340-24518989d830	MT	12384	12385	-	C	INS	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	frame_shift_ins	c.48_49	p.I18fs	NULL	tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786				132	0	0	129	11	7.85714
