Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
MTOR	0	genome.wustl.edu	37	1	11193105	11193105	+	RNA	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	11193105	11193105	C	G	SNP	MTOR	ENST00000495435	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	MTOR	HGNC	ENSG00000198793				198	0	0	40	24	37.5
NBPF14	0	genome.wustl.edu	37	1	148016443	148016443	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	148016443	148016443	C	A	SNP	NBPF14	ENST00000369219	human	ensembl	74_37	-1	known	missense	c.799	p.V267L	0.000	NULL	pfam_NBPF_dom	-	no_errors	NBPF14	HGNC	ENSG00000122497				444	0	0	178	67	27.3469
RORC	0	genome.wustl.edu	37	1	151787828	151787828	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	151787828	151787828	C	G	SNP	RORC	ENST00000392697	human	ensembl	74_37	-1	known	missense	c.534	p.Q178H	1.000	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_ROR_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	RORC	HGNC	ENSG00000143365				66	0	0	41	10	19.6078
HRNR	0	genome.wustl.edu	37	1	152186120	152186120	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	152186120	152186120	A	G	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.7985	p.L2662S	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915				49	0	0	19	6	24
HRNR	0	genome.wustl.edu	37	1	152189237	152189237	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	152189237	152189237	C	G	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.4868	p.S1623T	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915				15	0	0	19	8	29.6296
S100A7L2	0	genome.wustl.edu	37	1	153410822	153410822	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	153410822	153410822	C	A	SNP	S100A7L2	ENST00000368725	human	ensembl	74_37	-1	known	missense	c.17	p.G6V	0.001	NULL	pfscan_EF_hand_dom	-	no_errors	S100A7L2	HGNC	ENSG00000197364				71	0	0	80	5	5.88235
RHBG	0	genome.wustl.edu	37	1	156351872	156351872	+	Nonsense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	156351872	156351872	C	A	SNP	RHBG	ENST00000368246	human	ensembl	74_37	+1	known	nonsense	c.992	p.S331*	0.226	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHBG	HGNC	ENSG00000132677				159	0	0	97	43	30.7143
GPR161	0	genome.wustl.edu	37	1	168066053	168066053	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	168066053	168066053	G	C	SNP	GPR161	ENST00000537209	human	ensembl	74_37	-1	known	missense	c.852	p.N284K	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR161	HGNC	ENSG00000143147				233	0	0	117	41	25.9494
PADI6	0	genome.wustl.edu	37	1	17721556	17721556	+	RNA	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	17721556	17721556	G	C	SNP	PADI6	ENST00000358481	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	PADI6	HGNC	ENSG00000256049				170	0	0	29	21	42
LRRN2	0	genome.wustl.edu	37	1	204588700	204588700	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	204588700	204588700	C	G	SNP	LRRN2	ENST00000367175	human	ensembl	74_37	-1	known	missense	c.421	p.A141P	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRN2	HGNC	ENSG00000170382				252	0	0	117	37	24.026
CD46	0	genome.wustl.edu	37	1	207933057	207933057	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	207933057	207933057	C	T	SNP	CD46	ENST00000322875	human	ensembl	74_37	+1	known	missense	c.463	p.P155S	0.381	pirsf_M_CF_CD46,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pirsf_M_CF_CD46,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CD46	HGNC	ENSG00000117335				34	0	0	28	9	24.3243
HSPG2	0	genome.wustl.edu	37	1	22199882	22199882	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	22199882	22199882	C	G	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.3779	p.G1260A	1.000	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				320	1	0.311526	76	33	30.2752
OBSCN	0	genome.wustl.edu	37	1	228434292	228434292	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	228434292	228434292	C	G	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.3821	p.A1274G	0.014	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				187	0	0	30	29	49.1525
MEAF6	0	genome.wustl.edu	37	1	37959615	37959615	+	RNA	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	37959615	37959615	C	G	SNP	MEAF6	ENST00000475828	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	MEAF6	HGNC	ENSG00000163875				162	0	0	77	36	31.8584
MYCL	0	genome.wustl.edu	37	1	40366943	40366943	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	40366943	40366943	G	A	SNP	MYCL	ENST00000372816	human	ensembl	74_37	-1	known	missense	c.164	p.A55V	0.000	pfam_Tscrpt_reg_Myc_N	pfam_Tscrpt_reg_Myc_N,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom,prints_Tscrpt_reg_Myc	-	no_errors	MYCL	HGNC	ENSG00000116990				19	0	0	5	3	37.5
C1orf87	0	genome.wustl.edu	37	1	60456237	60456237	+	RNA	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	60456237	60456237	C	T	SNP	C1orf87	ENST00000486478	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	C1orf87	HGNC	ENSG00000162598				103	0	0	38	28	42.4242
UTS2	0	genome.wustl.edu	37	1	7913445	7913445	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	7913445	7913445	C	T	SNP	UTS2	ENST00000054668	human	ensembl	74_37	-1	known	missense	c.47	p.R16Q	0.110	NULL	pfam_Urotensin_II	-	no_errors	UTS2	HGNC	ENSG00000049247				158	0	0	58	7	10.7692
ABCD3	0	genome.wustl.edu	37	1	94982785	94982785	+	RNA	SNP	A	A	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	94982785	94982785	A	T	SNP	ABCD3	ENST00000464165	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ABCD3	HGNC	ENSG00000117528				36	0	0	21	11	34.375
LPPR5	0	genome.wustl.edu	37	1	99470042	99470042	+	Silent	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	99470042	99470042	G	C	SNP	LPPR5	ENST00000263177	human	ensembl	74_37	-1	known	silent	c.186	p.A62	0.995	superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR5	Uniprot_gn	ENSG00000117598				70	0	0	18	13	41.9355
CCDC7	0	genome.wustl.edu	37	10	32742307	32742307	+	Silent	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	10	32742307	32742307	C	T	SNP	CCDC7	ENST00000277657	human	ensembl	74_37	+1	known	silent	c.315	p.C105	0.000	NULL	NULL	-	no_errors	CCDC7	HGNC	ENSG00000216937				98	0	0	57	18	24
C10orf53	0	genome.wustl.edu	37	10	50916559	50916559	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	10	50916559	50916559	G	A	SNP	C10orf53	ENST00000374112	human	ensembl	74_37	+1	known	missense	c.370	p.G124R	0.004	NULL	NULL	-	no_errors	C10orf53	HGNC	ENSG00000178645				287	0	0	113	57	33.5294
CDH23	0	genome.wustl.edu	37	10	73494045	73494045	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	10	73494045	73494045	T	C	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.4168	p.Y1390H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				27	0	0	9	6	40
HMBS	0	genome.wustl.edu	37	11	118963856	118963856	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	118963856	118963856	G	A	SNP	HMBS	ENST00000278715	human	ensembl	74_37	+1	known	missense	c.949	p.G317S	1.000	superfamily_Porphobilinogen_deaminase_C,pirsf_4pyrrol_synth_OHMeBilane_synth	pfam_Porphobilin_deaminase_N,pfam_Porphobilinogen_deaminase_C,superfamily_Porphobilinogen_deaminase_C,pirsf_4pyrrol_synth_OHMeBilane_synth,prints_4pyrrol_synth_OHMeBilane_synth,tigrfam_4pyrrol_synth_OHMeBilane_synth	-	no_errors	HMBS	HGNC	ENSG00000256269				160	0	0	22	25	53.1915
CD81	0	genome.wustl.edu	37	11	2415369	2415369	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	2415369	2415369	G	C	SNP	CD81	ENST00000263645	human	ensembl	74_37	+1	known	missense	c.226	p.G76R	0.998	pfam_Tetraspanin/Peripherin,prints_Tetraspanin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	CD81	HGNC	ENSG00000110651				104	0	0	10	14	58.3333
TRPM5	0	genome.wustl.edu	37	11	2436698	2436698	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	2436698	2436698	A	C	SNP	TRPM5	ENST00000452833	human	ensembl	74_37	-1	known	missense	c.1138	p.C380G	0.548	superfamily_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom	-	no_errors	TRPM5	HGNC	ENSG00000070985				38	0	0	3	7	70
OR51M1	0	genome.wustl.edu	37	11	5411398	5411398	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	5411398	5411398	T	G	SNP	OR51M1	ENST00000328611	human	ensembl	74_37	+1	known	missense	c.770	p.L257R	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51M1	HGNC	ENSG00000184698				91	0	0	28	4	12.5
OR4A15	0	genome.wustl.edu	37	11	55136271	55136271	+	Silent	SNP	T	T	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	55136271	55136271	T	G	SNP	OR4A15	ENST00000314706	human	ensembl	74_37	+1	known	silent	c.912	p.T304	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A15	HGNC	ENSG00000181958				336	0	0	261	23	8.09859
OR52B6	0	genome.wustl.edu	37	11	5602275	5602275	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	5602275	5602275	A	G	SNP	OR52B6	ENST00000345043	human	ensembl	74_37	+1	known	missense	c.169	p.T57A	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52B6	HGNC	ENSG00000187747				84	0	0	50	7	12.2807
TRIM6-TRIM34	0	genome.wustl.edu	37	11	5629607	5629607	+	Silent	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	5629607	5629607	G	A	SNP	TRIM6-TRIM34	ENST00000354852	human	ensembl	74_37	+1	known	silent	c.840	p.V280	0.997	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM6-TRIM34	HGNC	ENSG00000258588				63	0	0	26	4	13.3333
INTS5	0	genome.wustl.edu	37	11	62416240	62416240	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	62416240	62416240	G	C	SNP	INTS5	ENST00000330574	human	ensembl	74_37	-1	known	missense	c.1312	p.L438V	1.000	NULL	NULL	-	no_errors	INTS5	HGNC	ENSG00000185085				127	0	0	30	19	38.7755
VPS51	0	genome.wustl.edu	37	11	64875938	64875938	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	64875938	64875938	C	G	SNP	VPS51	ENST00000279281	human	ensembl	74_37	+1	known	missense	c.995	p.A332G	0.859	superfamily_Cullin_repeat-like_dom	pfam_COG8,pfam_Vacuolar_sorting-assoc_54,pfam_COG_su2_N,pfam_RZZ-complex_Zw10,superfamily_Cullin_repeat-like_dom	-	no_errors	VPS51	HGNC	ENSG00000149823				58	0	0	13	4	23.5294
KLC2	0	genome.wustl.edu	37	11	66026228	66026228	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	66026228	66026228	C	G	SNP	KLC2	ENST00000316924	human	ensembl	74_37	+1	known	missense	c.163	p.Q55E	0.997	NULL	pfam_Rabaptin_Rab5-bd_dom,pfam_TPR_1,smart_TPR_repeat,prints_Kinesin_light,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KLC2	HGNC	ENSG00000174996				92	0	0	29	16	35.5556
GPR152	0	genome.wustl.edu	37	11	67218848	67218848	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	67218848	67218848	C	T	SNP	GPR152	ENST00000312457	human	ensembl	74_37	-1	known	missense	c.1348	p.A450T	0.005	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR152	HGNC	ENSG00000175514				132	0	0	52	4	7.14286
PHOX2A	0	genome.wustl.edu	37	11	71950893	71950893	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	71950893	71950893	T	C	SNP	PHOX2A	ENST00000298231	human	ensembl	74_37	-1	known	missense	c.755	p.K252R	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	PHOX2A	HGNC	ENSG00000165462				10	0	0	4	2	33.3333
GPR83	0	genome.wustl.edu	37	11	94129639	94129639	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	94129639	94129639	T	G	SNP	GPR83	ENST00000243673	human	ensembl	74_37	-1	known	missense	c.439	p.S147R	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	GPR83	HGNC	ENSG00000123901				128	0	0	45	18	28.5714
PLA2G1B	0	genome.wustl.edu	37	12	120763699	120763699	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	120763699	120763699	C	A	SNP	PLA2G1B	ENST00000308366	human	ensembl	74_37	-1	known	missense	c.159	p.L53F	0.998	pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom,prints_PLipase_A2	pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom,prints_PLipase_A2	-	no_errors	PLA2G1B	HGNC	ENSG00000170890				266	1	0.374532	80	23	22.3301
RIMBP2	0	genome.wustl.edu	37	12	130912757	130912757	+	Silent	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	130912757	130912757	C	T	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	silent	c.2328	p.R776	1.000	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709				79	0	0	28	4	12.5
RIMBP2	0	genome.wustl.edu	37	12	130927120	130927120	+	Silent	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	130927120	130927120	C	T	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	silent	c.726	p.T242	0.001	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709				141	0	0	57	4	6.55738
LINC00477	0	genome.wustl.edu	37	12	24736768	24736768	+	RNA	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	24736768	24736768	C	A	SNP	LINC00477	ENST00000483544	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC00477	HGNC	ENSG00000197503				100	0	0	37	8	17.7778
TEAD4	0	genome.wustl.edu	37	12	3126584	3126584	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	3126584	3126584	G	C	SNP	TEAD4	ENST00000359864	human	ensembl	74_37	+1	known	missense	c.375	p.K125N	1.000	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD4	HGNC	ENSG00000197905				125	0	0	37	25	40.3226
PRPF40B	0	genome.wustl.edu	37	12	49998034	49998034	+	RNA	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	49998034	49998034	C	G	SNP	PRPF40B	ENST00000508736	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PRPF40B	HGNC	ENSG00000110844				38	0	0	9	15	62.5
BIN2	0	genome.wustl.edu	37	12	51685395	51685395	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	51685395	51685395	G	T	SNP	BIN2	ENST00000267012	human	ensembl	74_37	-1	known	missense	c.1495	p.P499T	0.004	NULL	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom,prints_Amphiphysin	-	no_errors	BIN2	HGNC	ENSG00000110934				111	0	0	19	14	42.4242
BIN2	0	genome.wustl.edu	37	12	51685396	51685396	+	Silent	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	51685396	51685396	G	T	SNP	BIN2	ENST00000267012	human	ensembl	74_37	-1	known	silent	c.1494	p.S498	0.001	NULL	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom,prints_Amphiphysin	-	no_errors	BIN2	HGNC	ENSG00000110934				113	0	0	19	14	42.4242
KRT84	0	genome.wustl.edu	37	12	52779341	52779341	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	52779341	52779341	G	T	SNP	KRT84	ENST00000257951	human	ensembl	74_37	-1	known	missense	c.29	p.S10Y	0.986	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT84	HGNC	ENSG00000161849				268	0	0	25	24	48.9796
KRT75	0	genome.wustl.edu	37	12	52822136	52822136	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	52822136	52822136	C	G	SNP	KRT75	ENST00000252245	human	ensembl	74_37	-1	known	missense	c.1286	p.R429P	0.997	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT75	HGNC	ENSG00000170454				130	0	0	25	16	39.0244
CD163	0	genome.wustl.edu	37	12	7649454	7649454	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	7649454	7649454	T	C	SNP	CD163	ENST00000359156	human	ensembl	74_37	-1	known	missense	c.1054	p.K352E	0.067	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	CD163	HGNC	ENSG00000177575				96	0	0	50	34	40.4762
SLC2A14	0	genome.wustl.edu	37	12	7980243	7980243	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	7980243	7980243	G	C	SNP	SLC2A14	ENST00000396589	human	ensembl	74_37	-1	known	missense	c.781	p.Q261E	0.325	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A14	HGNC	ENSG00000173262				93	0	0	54	4	6.89655
SLC2A3	0	genome.wustl.edu	37	12	8082432	8082432	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	8082432	8082432	G	C	SNP	SLC2A3	ENST00000075120	human	ensembl	74_37	-1	known	missense	c.709	p.Q237E	0.532	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A3	HGNC	ENSG00000059804				166	0	0	78	21	21.2121
C12orf50	0	genome.wustl.edu	37	12	88379779	88379779	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	88379779	88379779	T	A	SNP	C12orf50	ENST00000298699	human	ensembl	74_37	-1	known	missense	c.974	p.K325I	1.000	NULL	NULL	-	no_errors	C12orf50	HGNC	ENSG00000165805				185	0	0	32	29	47.541
USP44	0	genome.wustl.edu	37	12	95927762	95927762	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	12	95927762	95927762	T	C	SNP	USP44	ENST00000258499	human	ensembl	74_37	-1	known	missense	c.271	p.T91A	1.000	NULL	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP44	HGNC	ENSG00000136014				85	0	0	46	5	9.80392
CUL4A	0	genome.wustl.edu	37	13	113887618	113887618	+	Silent	SNP	T	T	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	13	113887618	113887618	T	C	SNP	CUL4A	ENST00000375440	human	ensembl	74_37	+1	known	silent	c.640	p.L214	0.998	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL4A	HGNC	ENSG00000139842				114	0	0	16	21	56.7568
NBEA	0	genome.wustl.edu	37	13	35926334	35926334	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	13	35926334	35926334	A	G	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.6053	p.E2018G	1.000	pfam_DUF1088	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				36	0	0	22	12	35.2941
NBEA	0	genome.wustl.edu	37	13	36229748	36229748	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	13	36229748	36229748	G	C	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.8161	p.D2721H	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				332	0	0	171	63	26.9231
TBC1D4	0	genome.wustl.edu	37	13	76055892	76055892	+	Silent	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	13	76055892	76055892	G	A	SNP	TBC1D4	ENST00000377636	human	ensembl	74_37	-1	known	silent	c.12	p.P4	0.834	NULL	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D4	HGNC	ENSG00000136111				32	0	0	7	4	36.3636
IPO5	0	genome.wustl.edu	37	13	98652834	98652834	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	13	98652834	98652834	G	T	SNP	IPO5	ENST00000261574	human	ensembl	74_37	+1	known	missense	c.1097	p.C366F	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_Importin-beta_N	-	no_errors	IPO5	HGNC	ENSG00000065150				138	1	0.719424	20	33	62.2642
MIR329-1	0	genome.wustl.edu	37	14	101493150	101493150	+	RNA	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	14	101493150	101493150	C	T	SNP	MIR329-1	ENST00000385028	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR329-1	HGNC	ENSG00000207761				168	0	0	40	84	67.7419
FSCB	0	genome.wustl.edu	37	14	44974327	44974327	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	14	44974327	44974327	C	A	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.1864	p.V622F	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139				51	0	0	41	8	16.3265
NRXN3	0	genome.wustl.edu	37	14	79433613	79433613	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	14	79433613	79433613	G	A	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.2807	p.R936H	0.993	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				83	0	0	39	50	56.1798
DLL4	0	genome.wustl.edu	37	15	41222285	41222285	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	15	41222285	41222285	C	A	SNP	DLL4	ENST00000249749	human	ensembl	74_37	+1	known	missense	c.307	p.L103I	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,superfamily_Growth_fac_rcpt_N_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	DLL4	HGNC	ENSG00000128917				26	0	0	1	4	80
SPTBN5	0	genome.wustl.edu	37	15	42159828	42159828	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	15	42159828	42159828	T	G	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.6220	p.T2074P	0.993	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877				292	0	0	38	56	59.5745
DMXL2	0	genome.wustl.edu	37	15	51766637	51766637	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	15	51766637	51766637	C	A	SNP	DMXL2	ENST00000543779	human	ensembl	74_37	-1	known	missense	c.7117	p.A2373S	1.000	NULL	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL2	HGNC	ENSG00000104093				113	0	0	28	26	48.1481
ANKDD1A	0	genome.wustl.edu	37	15	65209596	65209596	+	Silent	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	15	65209596	65209596	G	T	SNP	ANKDD1A	ENST00000380230	human	ensembl	74_37	+1	known	silent	c.150	p.V50	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,prints_Ankyrin_rpt	-	no_errors	ANKDD1A	HGNC	ENSG00000166839				26	0	0	5	5	50
IGDCC3	0	genome.wustl.edu	37	15	65623827	65623827	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	15	65623827	65623827	A	G	SNP	IGDCC3	ENST00000327987	human	ensembl	74_37	-1	known	missense	c.1319	p.V440A	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGDCC3	HGNC	ENSG00000174498				56	0	0	36	21	36.8421
ENSG00000187812	0	genome.wustl.edu	37	15	76074470	76074470	+	RNA	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	15	76074470	76074470	A	G	SNP	ENSG00000187812	ENST00000395215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.030	-	-	-	no_errors	RP11-24M17.5	Clone_based_vega_gene	ENSG00000187812				36	0	0	59	8	11.9403
CHRNB4	0	genome.wustl.edu	37	15	78927920	78927920	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	15	78927920	78927920	C	T	SNP	CHRNB4	ENST00000261751	human	ensembl	74_37	-1	known	missense	c.65	p.R22H	0.459	tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB4	HGNC	ENSG00000117971				475	0	0	315	72	18.6047
NFAT5	0	genome.wustl.edu	37	16	69727070	69727070	+	Silent	SNP	A	A	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	16	69727070	69727070	A	C	SNP	NFAT5	ENST00000432919	human	ensembl	74_37	+1	known	silent	c.3342	p.P1114	0.988	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFAT5	HGNC	ENSG00000102908				320	0	0	116	70	37.6344
SF3B3	0	genome.wustl.edu	37	16	70563087	70563087	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	16	70563087	70563087	C	G	SNP	SF3B3	ENST00000302516	human	ensembl	74_37	+1	known	missense	c.382	p.R128G	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C,superfamily_WD40_repeat_dom	-	no_errors	SF3B3	HGNC	ENSG00000189091				130	0	0	54	21	28
WDR90	0	genome.wustl.edu	37	16	708999	708999	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	16	708999	708999	C	A	SNP	WDR90	ENST00000549091	human	ensembl	74_37	+1	novel	missense	c.2999	p.A1000D	0.714	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_DUF667,pfam_Nucleoporin_Nup160,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR90	HGNC	ENSG00000161996				138	0	0	62	31	33.3333
NF1	0	genome.wustl.edu	37	17	29509582	29509582	+	Nonsense_Mutation	SNP	A	A	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	29509582	29509582	A	T	SNP	NF1	ENST00000358273	human	ensembl	74_37	+1	known	nonsense	c.787	p.K263*	1.000	NULL	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				41	0	0	11	17	60.7143
NF1	0	genome.wustl.edu	37	17	29509583	29509583	+	Missense_Mutation	SNP	A	A	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	29509583	29509583	A	T	SNP	NF1	ENST00000358273	human	ensembl	74_37	+1	known	missense	c.788	p.K263I	1.000	NULL	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				42	0	0	11	18	62.069
NF1	0	genome.wustl.edu	37	17	29509584	29509584	+	Missense_Mutation	SNP	A	A	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	29509584	29509584	A	T	SNP	NF1	ENST00000358273	human	ensembl	74_37	+1	known	missense	c.789	p.K263N	1.000	NULL	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				43	0	0	11	18	62.069
ITGAE	0	genome.wustl.edu	37	17	3657208	3657208	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	3657208	3657208	C	T	SNP	ITGAE	ENST00000263087	human	ensembl	74_37	-1	known	missense	c.1396	p.A466T	0.940	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_VWF_A,smart_Int_alpha_beta-p,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAE	HGNC	ENSG00000083457				66	0	0	14	22	61.1111
DHX8	0	genome.wustl.edu	37	17	41598738	41598738	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	41598738	41598738	A	G	SNP	DHX8	ENST00000262415	human	ensembl	74_37	+1	known	missense	c.3068	p.D1023G	1.000	pfam_Helicase-assoc_dom,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX8	HGNC	ENSG00000067596				44	0	0	14	6	30
TMUB2	0	genome.wustl.edu	37	17	42268059	42268059	+	Missense_Mutation	SNP	A	A	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	42268059	42268059	A	T	SNP	TMUB2	ENST00000538716	human	ensembl	74_37	+1	known	missense	c.793	p.S265C	1.000	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	TMUB2	HGNC	ENSG00000168591				202	0	0	86	43	33.3333
LRRC37A4P	0	genome.wustl.edu	37	17	43591861	43591861	+	RNA	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	43591861	43591861	G	A	SNP	LRRC37A4P	ENST00000579913	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	LRRC37A4P	HGNC	ENSG00000214425				16	0	0	21	6	22.2222
JMJD6	0	genome.wustl.edu	37	17	74714795	74714795	+	Silent	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	74714795	74714795	C	T	SNP	JMJD6	ENST00000585429	human	ensembl	74_37	-1	putative	silent	c.1089	p.L363	0.003	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD6	HGNC	ENSG00000070495				94	0	0	31	13	29.5455
MFSD11	0	genome.wustl.edu	37	17	74740462	74740462	+	Silent	SNP	T	T	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	74740462	74740462	T	A	SNP	MFSD11	ENST00000336509	human	ensembl	74_37	+1	known	silent	c.555	p.V185	0.995	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_Ion_channel_UNC-93,pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD11	HGNC	ENSG00000092931				111	0	0	51	27	34.6154
CDH2	0	genome.wustl.edu	37	18	25582961	25582961	+	Silent	SNP	T	T	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	18	25582961	25582961	T	C	SNP	CDH2	ENST00000269141	human	ensembl	74_37	-1	known	silent	c.1020	p.E340	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH2	HGNC	ENSG00000170558				162	0	0	107	17	13.7097
ATP9B	0	genome.wustl.edu	37	18	77096644	77096644	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	18	77096644	77096644	G	C	SNP	ATP9B	ENST00000426216	human	ensembl	74_37	+1	known	missense	c.2045	p.R682P	0.832	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9B	HGNC	ENSG00000166377				74	0	0	12	9	42.8571
CDC37	0	genome.wustl.edu	37	19	10506724	10506724	+	Silent	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	19	10506724	10506724	G	C	SNP	CDC37	ENST00000222005	human	ensembl	74_37	-1	known	silent	c.258	p.A86	0.182	pfam_Cdc37_N_dom	pfam_Cdc37_Hsp90-bd,pfam_Cdc37_N_dom,pfam_Cdc37_C	-	no_errors	CDC37	HGNC	ENSG00000105401				254	1	0.392157	111	28	20.1439
DNAJB1	0	genome.wustl.edu	37	19	14629110	14629110	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	19	14629110	14629110	C	T	SNP	DNAJB1	ENST00000254322	human	ensembl	74_37	-1	known	missense	c.52	p.E18K	1.000	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	pfam_DnaJ_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB1	HGNC	ENSG00000132002				74	0	0	24	9	27.2727
NWD1	0	genome.wustl.edu	37	19	16860087	16860087	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	19	16860087	16860087	G	C	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	missense	c.634	p.A212P	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039				183	0	0	58	7	10.7692
COPE	0	genome.wustl.edu	37	19	19030124	19030124	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	19	19030124	19030124	C	T	SNP	COPE	ENST00000262812	human	ensembl	74_37	-1	known	missense	c.34	p.G12S	0.995	pirsf_Coatomer_esu	pfam_Coatomer_esu,pirsf_Coatomer_esu	-	no_errors	COPE	HGNC	ENSG00000105669				131	0	0	50	13	20.6349
ZNF682	0	genome.wustl.edu	37	19	20117898	20117898	+	Nonsense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	19	20117898	20117898	G	C	SNP	ZNF682	ENST00000397165	human	ensembl	74_37	-1	known	nonsense	c.413	p.S138*	0.011	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF682	HGNC	ENSG00000197124				61	0	0	56	12	17.6471
ZNF536	0	genome.wustl.edu	37	19	30935410	30935410	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	19	30935410	30935410	A	G	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.941	p.E314G	1.000	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597				319	0	0	103	20	16.2602
RYR1	0	genome.wustl.edu	37	19	39063921	39063921	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	19	39063921	39063921	G	C	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.14103	p.Q4701H	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				55	0	0	20	8	28.5714
PTBP1	0	genome.wustl.edu	37	19	799436	799436	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	19	799436	799436	G	C	SNP	PTBP1	ENST00000356948	human	ensembl	74_37	+1	known	missense	c.32	p.G11A	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	PTBP1	HGNC	ENSG00000011304				193	0	0	72	24	25
SMPD4	0	genome.wustl.edu	37	2	130931167	130931167	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	2	130931167	130931167	G	A	SNP	SMPD4	ENST00000339679	human	ensembl	74_37	-1	known	missense	c.43	p.R15C	0.000	NULL	NULL	-	no_errors	SMPD4	HGNC	ENSG00000136699				77	0	0	38	4	9.52381
NR4A2	0	genome.wustl.edu	37	2	157186462	157186462	+	Nonsense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	2	157186462	157186462	G	T	SNP	NR4A2	ENST00000539077	human	ensembl	74_37	-1	known	nonsense	c.270	p.Y90*	1.000	prints_NURR_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NURR_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A2	HGNC	ENSG00000153234				165	0	0	66	36	35.2941
DLX1	0	genome.wustl.edu	37	2	172950706	172950706	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	2	172950706	172950706	C	G	SNP	DLX1	ENST00000361725	human	ensembl	74_37	+1	known	missense	c.301	p.L101V	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX1	HGNC	ENSG00000144355				112	0	0	37	21	36.2069
TTLL4	0	genome.wustl.edu	37	2	219617528	219617528	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	2	219617528	219617528	G	T	SNP	TTLL4	ENST00000258398	human	ensembl	74_37	+1	known	missense	c.3019	p.V1007F	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL4	HGNC	ENSG00000135912				149	0	0	79	37	31.8966
ARHGAP25	0	genome.wustl.edu	37	2	69002222	69002222	+	RNA	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	2	69002222	69002222	C	A	SNP	ARHGAP25	ENST00000463061	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARHGAP25	HGNC	ENSG00000163219				90	0	0	51	15	22.7273
RSPO4	0	genome.wustl.edu	37	20	947920	947920	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	20	947920	947920	G	T	SNP	RSPO4	ENST00000217260	human	ensembl	74_37	-1	known	missense	c.306	p.D102E	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO4	HGNC	ENSG00000101282				194	0	0	46	29	38.6667
SCAF4	0	genome.wustl.edu	37	21	33064675	33064675	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	21	33064675	33064675	A	G	SNP	SCAF4	ENST00000286835	human	ensembl	74_37	-1	known	missense	c.1601	p.I534T	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304				85	0	0	34	14	29.1667
VPREB1	0	genome.wustl.edu	37	22	22599522	22599522	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	22	22599522	22599522	T	A	SNP	VPREB1	ENST00000403807	human	ensembl	74_37	+1	known	missense	c.211	p.Y71N	0.002	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	VPREB1	HGNC	ENSG00000169575				218	0	0	57	27	32.1429
PATZ1	0	genome.wustl.edu	37	22	31737418	31737418	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	22	31737418	31737418	C	A	SNP	PATZ1	ENST00000215919	human	ensembl	74_37	-1	known	missense	c.1587	p.R529S	1.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	PATZ1	HGNC	ENSG00000100105				162	0	0	65	29	30.8511
RFPL3	0	genome.wustl.edu	37	22	32756703	32756703	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	22	32756703	32756703	C	T	SNP	RFPL3	ENST00000249007	human	ensembl	74_37	+1	known	missense	c.838	p.R280C	0.044	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL3	HGNC	ENSG00000128276				118	0	0	90	5	5.26316
C22orf23	0	genome.wustl.edu	37	22	38343297	38343297	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	22	38343297	38343297	G	C	SNP	C22orf23	ENST00000249079	human	ensembl	74_37	-1	known	missense	c.340	p.Q114E	0.126	pfam_UPF0193	pfam_UPF0193	-	no_errors	C22orf23	HGNC	ENSG00000128346				208	0	0	78	14	15.2174
ZBTB11	0	genome.wustl.edu	37	3	101383530	101383530	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	101383530	101383530	T	C	SNP	ZBTB11	ENST00000312938	human	ensembl	74_37	-1	known	missense	c.1652	p.K551R	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB11	HGNC	ENSG00000066422				115	0	0	52	24	31.5789
MYH15	0	genome.wustl.edu	37	3	108147527	108147527	+	Nonsense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	108147527	108147527	C	A	SNP	MYH15	ENST00000273353	human	ensembl	74_37	-1	known	nonsense	c.3574	p.E1192*	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821				146	0	0	76	37	32.7434
SEMA5B	0	genome.wustl.edu	37	3	122632141	122632141	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	122632141	122632141	G	A	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.2573	p.A858V	0.999	NULL	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684				19	0	0	3	2	40
TSEN2	0	genome.wustl.edu	37	3	12538034	12538034	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	12538034	12538034	C	T	SNP	TSEN2	ENST00000284995	human	ensembl	74_37	+1	known	missense	c.289	p.P97S	1.000	pirsf_tRNA_splic_SEN2	pfam_tRNA_intron_Endonuc_cat-like,pfam_tRNA_intron_Endonuc_N,superfamily_tRNA_intron_Endonuc_cat-like,pirsf_tRNA_splic_SEN2	-	no_errors	TSEN2	HGNC	ENSG00000154743				166	0	0	91	27	22.8814
TSEN2	0	genome.wustl.edu	37	3	12560614	12560614	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	12560614	12560614	C	G	SNP	TSEN2	ENST00000284995	human	ensembl	74_37	+1	known	missense	c.1017	p.F339L	1.000	pfam_tRNA_intron_Endonuc_cat-like,superfamily_tRNA_intron_Endonuc_cat-like,pirsf_tRNA_splic_SEN2	pfam_tRNA_intron_Endonuc_cat-like,pfam_tRNA_intron_Endonuc_N,superfamily_tRNA_intron_Endonuc_cat-like,pirsf_tRNA_splic_SEN2	-	no_errors	TSEN2	HGNC	ENSG00000154743				176	0	0	63	33	34.375
CP	0	genome.wustl.edu	37	3	148904424	148904424	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	148904424	148904424	C	T	SNP	CP	ENST00000264613	human	ensembl	74_37	-1	known	missense	c.1960	p.D654N	1.000	superfamily_Cupredoxin	pfam_Cu-oxidase_2,pfam_Cu-oxidase_3,pfam_Cu-oxidase,superfamily_Cupredoxin	-	no_errors	CP	HGNC	ENSG00000047457				104	0	0	65	31	32.2917
PLD1	0	genome.wustl.edu	37	3	171451290	171451290	+	Nonsense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	171451290	171451290	C	A	SNP	PLD1	ENST00000351298	human	ensembl	74_37	-1	known	nonsense	c.550	p.E184*	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pirsf_PLipase_D_euk,pfscan_Phox	pfam_Phox,pfam_PLipase_D/transphosphatidylase,pfam_Pleckstrin_homology,superfamily_Phox,smart_Phox,smart_Pleckstrin_homology,smart_PLipase_D/transphosphatidylase,pirsf_PLipase_D_euk,pfscan_Phox,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD1	HGNC	ENSG00000075651				58	0	0	34	10	22.7273
PLD1	0	genome.wustl.edu	37	3	171451291	171451291	+	Silent	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	171451291	171451291	C	A	SNP	PLD1	ENST00000351298	human	ensembl	74_37	-1	known	silent	c.549	p.L183	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pirsf_PLipase_D_euk,pfscan_Phox	pfam_Phox,pfam_PLipase_D/transphosphatidylase,pfam_Pleckstrin_homology,superfamily_Phox,smart_Phox,smart_Pleckstrin_homology,smart_PLipase_D/transphosphatidylase,pirsf_PLipase_D_euk,pfscan_Phox,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD1	HGNC	ENSG00000075651				59	0	0	34	10	22.7273
ATP13A5	0	genome.wustl.edu	37	3	193002749	193002749	+	Silent	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	193002749	193002749	G	A	SNP	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	silent	c.3180	p.F1060	0.997	tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527				68	0	0	68	35	33.9806
ZNF860	0	genome.wustl.edu	37	3	32031638	32031638	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	32031638	32031638	A	C	SNP	ZNF860	ENST00000360311	human	ensembl	74_37	+1	known	missense	c.1067	p.H356P	0.007	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF860	HGNC	ENSG00000197385				69	0	0	56	18	24.3243
FYCO1	0	genome.wustl.edu	37	3	46009157	46009157	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	46009157	46009157	C	A	SNP	FYCO1	ENST00000535325	human	ensembl	74_37	-1	known	missense	c.1669	p.A557S	0.000	NULL	pfam_Znf_FYVE,pfam_Run,superfamily_GOLD,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Znf_FYVE,pfscan_GOLD,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	FYCO1	HGNC	ENSG00000163820				172	1	0.578035	51	31	37.8049
P4HTM	0	genome.wustl.edu	37	3	49042339	49042339	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	49042339	49042339	C	G	SNP	P4HTM	ENST00000343546	human	ensembl	74_37	+1	known	missense	c.933	p.S311R	0.096	smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	P4HTM	HGNC	ENSG00000178467				179	1	0.555556	50	28	35.8974
FAM212A	0	genome.wustl.edu	37	3	49842272	49842272	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	49842272	49842272	G	A	SNP	FAM212A	ENST00000333323	human	ensembl	74_37	+1	known	missense	c.716	p.R239K	1.000	NULL	NULL	-	no_errors	FAM212A	HGNC	ENSG00000185614				236	0	0	64	52	44.8276
ITIH4	0	genome.wustl.edu	37	3	52863229	52863229	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	52863229	52863229	C	T	SNP	ITIH4	ENST00000266041	human	ensembl	74_37	-1	known	missense	c.157	p.V53I	0.020	pfam_VIT,smart_VIT	pfam_VIT,pfam_ITI_HC_C,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH4	HGNC	ENSG00000055955				153	0	0	55	22	28.5714
SETD5	0	genome.wustl.edu	37	3	9512248	9512248	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	9512248	9512248	C	G	SNP	SETD5	ENST00000402198	human	ensembl	74_37	+1	known	missense	c.2830	p.L944V	1.000	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SETD5	HGNC	ENSG00000168137				332	0	0	129	48	27.1186
MTMR14	0	genome.wustl.edu	37	3	9712789	9712789	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	9712789	9712789	A	C	SNP	MTMR14	ENST00000430020	human	ensembl	74_37	+1	known	missense	c.536	p.D179A	0.773	NULL	NULL	-	no_errors	MTMR14	HGNC	ENSG00000163719				148	0	0	74	30	28.8462
EPHA6	0	genome.wustl.edu	37	3	97356865	97356865	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	97356865	97356865	T	G	SNP	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	missense	c.2723	p.V908G	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224				123	0	0	73	6	7.59494
PCDH10	0	genome.wustl.edu	37	4	134076151	134076151	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	4	134076151	134076151	G	A	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	missense	c.2770	p.D924N	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650				124	0	0	19	10	34.4828
TRIM2	0	genome.wustl.edu	37	4	154197234	154197234	+	Silent	SNP	T	T	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	4	154197234	154197234	T	G	SNP	TRIM2	ENST00000338700	human	ensembl	74_37	+1	known	silent	c.405	p.T135	1.000	NULL	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM2	HGNC	ENSG00000109654				92	0	0	34	4	10.5263
CTSO	0	genome.wustl.edu	37	4	156860571	156860571	+	Silent	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	4	156860571	156860571	A	G	SNP	CTSO	ENST00000433477	human	ensembl	74_37	-1	known	silent	c.504	p.Y168	0.001	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSO	HGNC	ENSG00000256043				235	0	0	46	70	60.3448
FAT1	0	genome.wustl.edu	37	4	187527258	187527258	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	4	187527258	187527258	A	G	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.10316	p.V3439A	0.078	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				129	0	0	57	23	28.75
SEL1L3	0	genome.wustl.edu	37	4	25780794	25780794	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	4	25780794	25780794	G	C	SNP	SEL1L3	ENST00000399878	human	ensembl	74_37	-1	known	missense	c.2489	p.A830G	0.995	pfam_Sel1-like,smart_Sel1-like	pfam_Sel1-like,superfamily_ConA-like_lec_gl_sf,smart_Sel1-like	-	no_errors	SEL1L3	HGNC	ENSG00000091490				211	0	0	45	38	45.7831
DOK7	0	genome.wustl.edu	37	4	3478203	3478203	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	4	3478203	3478203	G	T	SNP	DOK7	ENST00000389653	human	ensembl	74_37	+1	known	missense	c.466	p.D156Y	0.995	pfam_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	DOK7	HGNC	ENSG00000175920				186	0	0	45	25	35.7143
PPAT	0	genome.wustl.edu	37	4	57272680	57272680	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	4	57272680	57272680	G	C	SNP	PPAT	ENST00000264220	human	ensembl	74_37	-1	known	missense	c.383	p.A128G	1.000	pfam_GATase_dom,pirsf_Amd_phspho_trans,tigrfam_Amd_phspho_trans	pfam_GATase_dom,pfam_PRibTrfase_dom,pirsf_Amd_phspho_trans,tigrfam_Amd_phspho_trans	-	no_errors	PPAT	HGNC	ENSG00000128059				175	0	0	70	39	35.7798
CABS1	0	genome.wustl.edu	37	4	71200843	71200843	+	Silent	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	4	71200843	71200843	G	T	SNP	CABS1	ENST00000273936	human	ensembl	74_37	+1	known	silent	c.87	p.G29	0.988	NULL	NULL	-	no_errors	CABS1	HGNC	ENSG00000145309				184	0	0	53	33	38.3721
APC	0	genome.wustl.edu	37	5	112175678	112175678	+	Silent	SNP	A	A	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	112175678	112175678	A	C	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	silent	c.4387	p.R1463	0.994	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				159	0	0	30	11	26.8293
BRD8	0	genome.wustl.edu	37	5	137503737	137503737	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	137503737	137503737	C	A	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	missense	c.673	p.G225C	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983				246	1	0.404858	47	26	35.6164
BRD8	0	genome.wustl.edu	37	5	137503739	137503739	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	137503739	137503739	G	A	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	missense	c.671	p.S224F	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983				244	0	0	42	41	49.3976
PCDHGB1	0	genome.wustl.edu	37	5	140731513	140731513	+	Silent	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	140731513	140731513	G	A	SNP	PCDHGB1	ENST00000523390	human	ensembl	74_37	+1	known	silent	c.1686	p.A562	0.192	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB1	HGNC	ENSG00000254221				141	0	0	52	31	37.3494
CSF1R	0	genome.wustl.edu	37	5	149459897	149459897	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	149459897	149459897	G	T	SNP	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	missense	c.310	p.P104T	0.941	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578				63	0	0	21	9	30
ZNF300P1	0	genome.wustl.edu	37	5	150310958	150310958	+	RNA	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	150310958	150310958	G	A	SNP	ZNF300P1	ENST00000520773	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.368	-	-	-	no_errors	ZNF300P1	HGNC	ENSG00000197083				54	0	0	23	8	25.8065
CDHR2	0	genome.wustl.edu	37	5	176016062	176016062	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	176016062	176016062	G	A	SNP	CDHR2	ENST00000261944	human	ensembl	74_37	+1	known	missense	c.2887	p.V963I	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR2	HGNC	ENSG00000074276				440	0	0	157	90	36.4372
RASGEF1C	0	genome.wustl.edu	37	5	179545650	179545650	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	179545650	179545650	C	T	SNP	RASGEF1C	ENST00000361132	human	ensembl	74_37	-1	known	missense	c.1042	p.A348T	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGEF1C	HGNC	ENSG00000146090				153	0	0	54	23	29.8701
PRLR	0	genome.wustl.edu	37	5	35065837	35065837	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	35065837	35065837	G	A	SNP	PRLR	ENST00000382002	human	ensembl	74_37	-1	known	missense	c.1223	p.A408V	0.000	NULL	pfam_Growth/epo_recpt_lig-bind,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	PRLR	HGNC	ENSG00000113494				286	1	0.348432	135	12	8.16327
LPA	0	genome.wustl.edu	37	6	160963737	160963737	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	6	160963737	160963737	T	A	SNP	LPA	ENST00000316300	human	ensembl	74_37	-1	known	missense	c.5502	p.Q1834H	1.000	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Kringle,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	LPA	HGNC	ENSG00000198670				169	0	0	37	28	43.0769
CUL1	0	genome.wustl.edu	37	7	148497615	148497615	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	7	148497615	148497615	G	C	SNP	CUL1	ENST00000325222	human	ensembl	74_37	+1	known	missense	c.2272	p.E758Q	1.000	pfam_Cullin_neddylation_domain,smart_Cullin_neddylation_domain	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL1	HGNC	ENSG00000055130				114	0	0	42	25	37.3134
GIMAP6	0	genome.wustl.edu	37	7	150325594	150325594	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	7	150325594	150325594	C	G	SNP	GIMAP6	ENST00000328902	human	ensembl	74_37	-1	known	missense	c.92	p.R31T	0.000	superfamily_P-loop_NTPase	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP6	HGNC	ENSG00000133561				360	1	0.277008	166	81	32.7935
SP4	0	genome.wustl.edu	37	7	21550647	21550647	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	7	21550647	21550647	G	C	SNP	SP4	ENST00000222584	human	ensembl	74_37	+1	known	missense	c.2115	p.K705N	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP4	HGNC	ENSG00000105866				91	0	0	46	21	31.3433
NUPL2	0	genome.wustl.edu	37	7	23226693	23226693	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	7	23226693	23226693	G	C	SNP	NUPL2	ENST00000258742	human	ensembl	74_37	+1	known	missense	c.373	p.E125Q	0.998	NULL	smart_Znf_CCCH	-	no_errors	NUPL2	HGNC	ENSG00000136243				180	0	0	68	25	26.8817
CCDC129	0	genome.wustl.edu	37	7	31682578	31682578	+	Nonsense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	7	31682578	31682578	G	T	SNP	CCDC129	ENST00000451887	human	ensembl	74_37	+1	known	nonsense	c.1672	p.E558*	0.000	NULL	NULL	-	no_errors	CCDC129	HGNC	ENSG00000180347				282	0	0	74	46	38.3333
SEPT14	0	genome.wustl.edu	37	7	55910721	55910721	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	7	55910721	55910721	C	T	SNP	SEPT14	ENST00000388975	human	ensembl	74_37	-1	known	missense	c.472	p.V158I	0.002	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT14	HGNC	ENSG00000154997				20	0	0	14	9	39.1304
GRM3	0	genome.wustl.edu	37	7	86416131	86416131	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	7	86416131	86416131	C	A	SNP	GRM3	ENST00000361669	human	ensembl	74_37	+1	known	missense	c.1023	p.N341K	0.476	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM3	HGNC	ENSG00000198822				75	0	0	27	15	35.7143
TMEM71	0	genome.wustl.edu	37	8	133764031	133764031	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	8	133764031	133764031	C	A	SNP	TMEM71	ENST00000356838	human	ensembl	74_37	-1	known	missense	c.314	p.S105I	0.994	NULL	NULL	-	no_errors	TMEM71	HGNC	ENSG00000165071				116	0	0	20	50	71.4286
PHF20L1	0	genome.wustl.edu	37	8	133844573	133844573	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	8	133844573	133844573	G	A	SNP	PHF20L1	ENST00000395386	human	ensembl	74_37	+1	putative	missense	c.1838	p.S613N	1.000	NULL	pfam_DUF3776,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Tudor-like_plant	-	no_errors	PHF20L1	HGNC	ENSG00000129292				163	0	0	116	19	14.0741
ZNF696	0	genome.wustl.edu	37	8	144378436	144378436	+	Silent	SNP	C	C	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	8	144378436	144378436	C	T	SNP	ZNF696	ENST00000330143	human	ensembl	74_37	+1	known	silent	c.591	p.L197	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF696	HGNC	ENSG00000185730				49	0	0	7	8	53.3333
LRRC14	0	genome.wustl.edu	37	8	145746159	145746159	+	Silent	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	8	145746159	145746159	C	G	SNP	LRRC14	ENST00000292524	human	ensembl	74_37	+1	known	silent	c.867	p.L289	1.000	NULL	NULL	-	no_errors	LRRC14	HGNC	ENSG00000160959				147	0	0	23	27	54
OR1L3	0	genome.wustl.edu	37	9	125438067	125438067	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	9	125438067	125438067	G	A	SNP	OR1L3	ENST00000304820	human	ensembl	74_37	+1	known	missense	c.659	p.R220K	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1L3	HGNC	ENSG00000171481				146	1	0.680272	34	37	52.1127
GLT6D1	0	genome.wustl.edu	37	9	138518015	138518015	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	9	138518015	138518015	C	G	SNP	GLT6D1	ENST00000371763	human	ensembl	74_37	-1	known	missense	c.157	p.A53P	0.987	pfam_Glyco_trans_6	pfam_Glyco_trans_6	-	no_errors	GLT6D1	HGNC	ENSG00000204007				153	1	0.649351	26	12	31.5789
LHX3	0	genome.wustl.edu	37	9	139092519	139092519	+	Nonsense_Mutation	SNP	T	T	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	9	139092519	139092519	T	A	SNP	LHX3	ENST00000371746	human	ensembl	74_37	-1	known	nonsense	c.175	p.K59*	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX3	HGNC	ENSG00000107187				69	0	0	10	13	56.5217
ELAVL2	0	genome.wustl.edu	37	9	23701496	23701496	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	9	23701496	23701496	G	C	SNP	ELAVL2	ENST00000380117	human	ensembl	74_37	-1	known	missense	c.594	p.I198M	1.000	smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL2	HGNC	ENSG00000107105				354	0	0	36	52	59.0909
KANK1	0	genome.wustl.edu	37	9	711323	711323	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	9	711323	711323	G	A	SNP	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	missense	c.557	p.S186N	1.000	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104				75	0	0	28	14	33.3333
PRUNE2	0	genome.wustl.edu	37	9	79323163	79323163	+	Nonsense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	9	79323163	79323163	C	A	SNP	PRUNE2	ENST00000428286	human	ensembl	74_37	-1	known	nonsense	c.2950	p.E984*	0.042	NULL	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	PRUNE2	HGNC	ENSG00000106772				95	0	0	14	25	64.1026
BTK	0	genome.wustl.edu	37	X	100629566	100629566	+	Silent	SNP	T	T	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	X	100629566	100629566	T	A	SNP	BTK	ENST00000308731	human	ensembl	74_37	-1	known	silent	c.198	p.T66	0.999	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,prints_SH2,prints_Znf_Btk_motif	-	no_errors	BTK	HGNC	ENSG00000010671				284	0	0	63	106	62.7219
NRK	0	genome.wustl.edu	37	X	105197131	105197131	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	X	105197131	105197131	A	G	SNP	NRK	ENST00000428173	human	ensembl	74_37	+1	known	missense	c.4622	p.K1541R	1.000	pfam_Citron,smart_Citron	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Citron,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	NRK	HGNC	ENSG00000123572				17	0	0	5	2	28.5714
EIF2S3	0	genome.wustl.edu	37	X	24073777	24073777	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	X	24073777	24073777	C	A	SNP	EIF2S3	ENST00000253039	human	ensembl	74_37	+1	known	missense	c.115	p.Q39K	1.000	superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3	HGNC	ENSG00000130741				69	0	0	32	14	30.4348
RGAG4	0	genome.wustl.edu	37	X	71349892	71349892	+	Missense_Mutation	SNP	A	A	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	X	71349892	71349892	A	T	SNP	RGAG4	ENST00000479991	human	ensembl	74_37	-1	known	missense	c.1499	p.I500K	0.002	NULL	pfam_Retrotrans_gag_dom	-	no_errors	RGAG4	HGNC	ENSG00000242732				50	0	0	4	13	76.4706
RPA4	0	genome.wustl.edu	37	X	96139406	96139406	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	X	96139406	96139406	G	A	SNP	RPA4	ENST00000373040	human	ensembl	74_37	+1	known	missense	c.97	p.A33T	0.000	pirsf_RPA32	pfam_RPA_C,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,pirsf_RPA32	-	no_errors	RPA4	HGNC	ENSG00000204086				66	0	0	35	3	7.89474
DDX3Y	0	genome.wustl.edu	37	Y	15029365	15029365	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	Y	15029365	15029365	G	T	SNP	DDX3Y	ENST00000336079	human	ensembl	74_37	+1	known	missense	c.1814	p.G605V	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX3Y	HGNC	ENSG00000067048				70	0	0	15	36	70.5882
SLAMF8	0	genome.wustl.edu	37	1	159805026	159805026	+	Frame_Shift_Del	DEL	C	C	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	159805026	159805026	C	-	DEL	SLAMF8	ENST00000289707	human	ensembl	74_37	+1	known	frame_shift_del	c.834	p.V281fs	0.000	NULL	pfscan_Ig-like_dom	-	no_errors	SLAMF8	HGNC	ENSG00000158714				124	0	0	62	12	16.2162
ADCY10	0	genome.wustl.edu	37	1	167839517	167839540	+	In_Frame_Del	DEL	GGTACTCAATTTTCATAAGTATCT	GGTACTCAATTTTCATAAGTATCT	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	GGTACTCAATTTTCATAAGTATCT	GGTACTCAATTTTCATAAGTATCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	1	167839517	167839540	GGTACTCAATTTTCATAAGTATCT	-	DEL	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	in_frame_del	c.1594_1571	p.QILMKIEY524in_frame_del	0.941:0.019:0.007:0.008:0.001:0.001:0.000:0.006:0.290:0.297:0.348:0.421:0.425:0.401:0.003:0.001:0.000:0.483:0.499:0.498:0.617:0.612:0.913:0.981	superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199				85	0	0	60	10	14.2857
PTEN	0	genome.wustl.edu	37	10	89717665	89717666	+	Frame_Shift_Ins	INS	-	-	C			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	10	89717665	89717666	-	C	INS	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	frame_shift_ins	c.690_691	p.T231fs	0.991:1.000	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862				187	0	0	46	24	34.2857
MUC6	0	genome.wustl.edu	37	11	1016973	1016974	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	11	1016973	1016974	GT	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	frame_shift_del	c.5828_5827	p.T1943fs	0.001:0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				1727	0	0	492	43	8.03738
NF1	0	genome.wustl.edu	37	17	29509580	29509580	+	Frame_Shift_Del	DEL	G	G	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	29509580	29509580	G	-	DEL	NF1	ENST00000358273	human	ensembl	74_37	+1	known	frame_shift_del	c.785	p.R262fs	1.000	NULL	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				45	0	0	15	16	51.6129
PPP1R9B	0	genome.wustl.edu	37	17	48212917	48212918	+	Frame_Shift_Del	DEL	CC	CC	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	17	48212917	48212918	CC	-	DEL	PPP1R9B	ENST00000316878	human	ensembl	74_37	-1	known	frame_shift_del	c.2395_2394	p.K798fs	1.000:1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PPP1R9B	HGNC	ENSG00000108819				28	0	0	9	5	35.7143
KIAA1841	0	genome.wustl.edu	37	2	61324903	61324913	+	Frame_Shift_Del	DEL	AAGTTCATTGA	AAGTTCATTGA	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	AAGTTCATTGA	AAGTTCATTGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	2	61324903	61324913	AAGTTCATTGA	-	DEL	KIAA1841	ENST00000356719	human	ensembl	74_37	+1	known	frame_shift_del	c.1281_1291	p.S428fs	0.007:0.006:0.000:0.000:0.000:0.001:0.000:0.000:0.000:0.000:0.008	pfam_DUF3342	pfam_DUF3342,superfamily_BTB/POZ_fold,superfamily_Homeodomain-like	-	no_errors	KIAA1841	HGNC	ENSG00000162929				160	0	0	79	54	40.6015
NCAM2	0	genome.wustl.edu	37	21	22664463	22664463	+	Frame_Shift_Del	DEL	T	T	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	21	22664463	22664463	T	-	DEL	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	frame_shift_del	c.521	p.L174fs	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654				128	0	0	57	23	28.75
ILDR1	0	genome.wustl.edu	37	3	121712708	121712711	+	Frame_Shift_Del	DEL	GAGG	GAGG	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	GAGG	GAGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	3	121712708	121712711	GAGG	-	DEL	ILDR1	ENST00000344209	human	ensembl	74_37	-1	known	frame_shift_del	c.888_885	p.N295fs	1.000:1.000:0.997:0.997	NULL	pfam_LISCH7,smart_Ig_sub	-	no_errors	ILDR1	HGNC	ENSG00000145103				123	0	0	27	3	10
APC	0	genome.wustl.edu	37	5	112175646	112175647	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	5	112175646	112175647	-	GG	INS	APC	ENST00000257430	human	ensembl	74_37	+1	known	frame_shift_ins	c.4355_4356	p.P1453fs	0.369:0.313	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				143	0	0	37	8	17.7778
NUPL2	0	genome.wustl.edu	37	7	23226692	23226692	+	Frame_Shift_Del	DEL	G	G	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	7	23226692	23226692	G	-	DEL	NUPL2	ENST00000258742	human	ensembl	74_37	+1	known	frame_shift_del	c.372	p.E125fs	1.000	NULL	smart_Znf_CCCH	-	no_errors	NUPL2	HGNC	ENSG00000136243				208	0	0	82	25	23.3645
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037863	10037863	+	RNA	DEL	C	C	-			TCGA-FP-8211-01A-11D-2340-08	TCGA-FP-8211-10A-01D-2341-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	479cf699-65e0-4a01-8183-314eb85c1b45	14408e43-3d4b-4db1-9d2f-22924b798223	Y	10037863	10037863	C	-	DEL	RNA5-8SP6	ENST00000515896	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705				49	0	0	18	3	14.2857
