Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
OR6K3	0	genome.wustl.edu	37	1	158687897	158687897	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	158687897	158687897	G	A	SNP	OR6K3	ENST00000368146	human	ensembl	74_37	-1	known	silent	c.57	p.S19	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6K3	HGNC	ENSG00000203757				72	0	0	63	6	8.69565
IFI16	0	genome.wustl.edu	37	1	158986419	158986419	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	158986419	158986419	T	A	SNP	IFI16	ENST00000295809	human	ensembl	74_37	+1	known	missense	c.478	p.S160T	0.000	NULL	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	IFI16	HGNC	ENSG00000163565				39	0	0	105	10	8.69565
CROCCP2	0	genome.wustl.edu	37	1	16946407	16946407	+	RNA	SNP	T	T	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	16946407	16946407	T	G	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908				9	0	0	27	8	22.8571
DHX9	0	genome.wustl.edu	37	1	182847239	182847239	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	182847239	182847239	G	A	SNP	DHX9	ENST00000367549	human	ensembl	74_37	+1	known	missense	c.2282	p.R761Q	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_dsRNA-bd_dom,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_dsRNA-bd_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom	-	no_errors	DHX9	HGNC	ENSG00000135829				56	0	0	60	8	11.7647
ADORA1	0	genome.wustl.edu	37	1	203134713	203134713	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	203134713	203134713	G	A	SNP	ADORA1	ENST00000309502	human	ensembl	74_37	+1	known	silent	c.666	p.P222	0.997	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adeno_A1_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adenosn_rcpt,prints_GPCR_Rhodpsn,prints_Adeno_A1_rcpt	-	no_errors	ADORA1	HGNC	ENSG00000163485				78	0	0	99	17	14.6552
CENPF	0	genome.wustl.edu	37	1	214792522	214792522	+	Nonsense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	214792522	214792522	C	T	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	nonsense	c.532	p.R178*	1.000	pfam_Centromere_CenpF_N	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724				24	0	0	21	15	41.6667
ENAH	0	genome.wustl.edu	37	1	225707053	225707053	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	225707053	225707053	C	T	SNP	ENAH	ENST00000366844	human	ensembl	74_37	-1	known	missense	c.649	p.E217K	0.932	NULL	pfam_WH1/EVH1,pfam_VASP_tetra,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	ENAH	HGNC	ENSG00000154380				72	0	0	102	11	9.73451
OBSCN	0	genome.wustl.edu	37	1	228548256	228548256	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	228548256	228548256	C	T	SNP	OBSCN	ENST00000366709	human	ensembl	74_37	+1	known	missense	c.11020	p.R3674W	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_DH-domain,pfam_Fibronectin_type3,pfam_IQ_motif_EF-hand-BS,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				19	0	0	36	2	5.26316
RYR2	0	genome.wustl.edu	37	1	237797008	237797008	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	237797008	237797008	T	C	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.6680	p.L2227P	1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				72	0	0	45	23	33.8235
POMGNT1	0	genome.wustl.edu	37	1	46657809	46657809	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	46657809	46657809	G	T	SNP	POMGNT1	ENST00000371986	human	ensembl	74_37	-1	known	missense	c.1500	p.H500Q	1.000	pfam_Glyco_trans_13	pfam_Glyco_trans_13	-	no_errors	POMGNT1	HGNC	ENSG00000085998				59	0	0	58	8	12.1212
SLC18A2	0	genome.wustl.edu	37	10	119014801	119014801	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	10	119014801	119014801	C	T	SNP	SLC18A2	ENST00000298472	human	ensembl	74_37	+1	known	silent	c.714	p.F238	0.702	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A2	HGNC	ENSG00000165646				48	0	0	47	15	24.1935
FGFR2	0	genome.wustl.edu	37	10	123244998	123244998	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	10	123244998	123244998	C	T	SNP	FGFR2	ENST00000457416	human	ensembl	74_37	-1	known	silent	c.2109	p.S703	0.132	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468				88	0	0	84	30	26.3158
KIAA1217	0	genome.wustl.edu	37	10	24820924	24820924	+	Splice_Site	SNP	T	T	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	10	24820924	24820924	T	C	SNP	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	splice_site	c.3246+2	e15+2	1.000	-	-	-	no_errors	KIAA1217	HGNC	ENSG00000120549				35	0	0	31	8	20.5128
DKK1	0	genome.wustl.edu	37	10	54076175	54076175	+	Nonsense_Mutation	SNP	C	C	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	10	54076175	54076175	C	A	SNP	DKK1	ENST00000373970	human	ensembl	74_37	+1	known	nonsense	c.527	p.S176*	0.594	NULL	pfam_Dickkopf_N	-	no_errors	DKK1	HGNC	ENSG00000107984				84	0	0	40	7	14.8936
ZWINT	0	genome.wustl.edu	37	10	58118611	58118611	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	10	58118611	58118611	C	T	SNP	ZWINT	ENST00000373944	human	ensembl	74_37	-1	known	missense	c.578	p.G193E	0.418	NULL	NULL	-	no_errors	ZWINT	HGNC	ENSG00000122952				105	0	0	84	33	28.2051
CD6	0	genome.wustl.edu	37	11	60785482	60785482	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	11	60785482	60785482	T	G	SNP	CD6	ENST00000313421	human	ensembl	74_37	+1	known	missense	c.1834	p.S612A	0.000	NULL	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD6	HGNC	ENSG00000013725				83	0	0	91	24	20.8696
SF1	0	genome.wustl.edu	37	11	64537512	64537512	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	11	64537512	64537512	G	A	SNP	SF1	ENST00000377390	human	ensembl	74_37	-1	known	missense	c.403	p.R135C	1.000	smart_KH_dom	pfam_KH_dom_type_1,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_KH_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_KH_dom_type_1	-	no_errors	SF1	HGNC	ENSG00000168066				39	0	0	34	7	17.0732
MALAT1	0	genome.wustl.edu	37	11	65268685	65268685	+	RNA	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	11	65268685	65268685	A	G	SNP	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				40	0	0	14	20	58.8235
LTBP3	0	genome.wustl.edu	37	11	65321232	65321232	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	11	65321232	65321232	G	A	SNP	LTBP3	ENST00000301873	human	ensembl	74_37	-1	known	silent	c.804	p.P268	0.303	superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056				10	0	0	6	4	40
AIP	0	genome.wustl.edu	37	11	67256814	67256814	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	11	67256814	67256814	G	A	SNP	AIP	ENST00000279146	human	ensembl	74_37	+1	known	missense	c.356	p.R119Q	1.000	NULL	pfam_PPIase_FKBP_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_PPIase_FKBP_dom	-	no_errors	AIP	HGNC	ENSG00000110711				47	0	0	65	29	30.8511
GAB2	0	genome.wustl.edu	37	11	77937657	77937657	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	11	77937657	77937657	C	G	SNP	GAB2	ENST00000361507	human	ensembl	74_37	-1	known	missense	c.1061	p.R354P	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB2	HGNC	ENSG00000033327				78	0	0	56	24	30
FAT3	0	genome.wustl.edu	37	11	92532287	92532287	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	11	92532287	92532287	G	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.6108	p.Q2036H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				50	0	0	48	11	18.6441
CLEC7A	0	genome.wustl.edu	37	12	10275931	10275931	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	10275931	10275931	G	T	SNP	CLEC7A	ENST00000304084	human	ensembl	74_37	-1	known	missense	c.524	p.P175H	0.002	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CLEC7A	HGNC	ENSG00000172243				22	0	0	38	3	7.31707
SLCO1B1	0	genome.wustl.edu	37	12	21377657	21377657	+	Silent	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	21377657	21377657	A	G	SNP	SLCO1B1	ENST00000256958	human	ensembl	74_37	+1	known	silent	c.1749	p.G583	1.000	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B1	HGNC	ENSG00000134538				64	0	0	44	42	48.8372
ABCD2	0	genome.wustl.edu	37	12	40013206	40013206	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	40013206	40013206	G	A	SNP	ABCD2	ENST00000308666	human	ensembl	74_37	-1	known	missense	c.212	p.T71I	0.000	NULL	pfam_ABC_Peroxi_TM,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCD2	HGNC	ENSG00000173208				110	0	0	80	22	21.5686
LRRK2	0	genome.wustl.edu	37	12	40677750	40677750	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	40677750	40677750	G	A	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.2315	p.R772Q	0.998	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906				65	0	0	46	35	43.2099
FAM19A2	0	genome.wustl.edu	37	12	62147502	62147502	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	62147502	62147502	C	G	SNP	FAM19A2	ENST00000416284	human	ensembl	74_37	-1	known	missense	c.285	p.W95C	1.000	pfam_Chemokine-like_FAM19A2	pfam_Chemokine-like_FAM19A2	-	no_errors	FAM19A2	HGNC	ENSG00000198673				95	0	0	95	7	6.86275
PTPRB	0	genome.wustl.edu	37	12	70954515	70954515	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	70954515	70954515	G	A	SNP	PTPRB	ENST00000334414	human	ensembl	74_37	-1	known	silent	c.4368	p.Y1456	0.997	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329				42	0	0	29	13	30.9524
C12orf50	0	genome.wustl.edu	37	12	88379767	88379767	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	88379767	88379767	G	A	SNP	C12orf50	ENST00000298699	human	ensembl	74_37	-1	known	missense	c.986	p.A329V	0.885	NULL	NULL	-	no_errors	C12orf50	HGNC	ENSG00000165805				124	0	0	99	26	20.8
PLXNC1	0	genome.wustl.edu	37	12	94603439	94603439	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	94603439	94603439	A	C	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	missense	c.1513	p.K505Q	0.004	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040				174	0	0	108	36	25
KRT19P2	0	genome.wustl.edu	37	12	95228799	95228799	+	RNA	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	95228799	95228799	C	T	SNP	KRT19P2	ENST00000405395	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.002	-	-	-	no_errors	KRT19P2	HGNC	ENSG00000216306				20	0	0	21	9	30
NALCN	0	genome.wustl.edu	37	13	101712256	101712256	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	13	101712256	101712256	G	A	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.4819	p.R1607W	0.999	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				49	0	0	72	27	27.2727
SACS	0	genome.wustl.edu	37	13	23907231	23907231	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	13	23907231	23907231	A	G	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.10784	p.L3595P	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				56	0	0	46	10	17.8571
NBEA	0	genome.wustl.edu	37	13	36242611	36242611	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	13	36242611	36242611	G	A	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.8705	p.G2902E	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				40	0	0	41	10	19.6078
HSP90AA1	0	genome.wustl.edu	37	14	102552275	102552275	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	14	102552275	102552275	C	A	SNP	HSP90AA1	ENST00000334701	human	ensembl	74_37	-1	known	missense	c.715	p.A239S	1.000	pirsf_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90AA1	HGNC	ENSG00000080824				109	0	0	74	20	21.2766
AHNAK2	0	genome.wustl.edu	37	14	105416313	105416313	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	14	105416313	105416313	C	G	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.5475	p.M1825I	0.985	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				623	0	0	688	62	8.26667
RTN1	0	genome.wustl.edu	37	14	60194151	60194151	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	14	60194151	60194151	G	A	SNP	RTN1	ENST00000267484	human	ensembl	74_37	-1	known	silent	c.1251	p.S417	0.097	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN1	HGNC	ENSG00000139970				10	0	0	2	4	66.6667
ACOT1	0	genome.wustl.edu	37	14	74009927	74009927	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	14	74009927	74009927	C	T	SNP	ACOT1	ENST00000311148	human	ensembl	74_37	+1	known	silent	c.834	p.N278	0.000	pfam_BAAT_C,pfam_Dienelactn_hydro,pirsf_Acyl-CoA_thioEstase_long-chain	pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pfam_Dienelactn_hydro,pirsf_Acyl-CoA_thioEstase_long-chain	-	no_errors	ACOT1	HGNC	ENSG00000184227				143	0	0	130	7	5.10949
ESRRB	0	genome.wustl.edu	37	14	76964735	76964735	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	14	76964735	76964735	C	T	SNP	ESRRB	ENST00000380887	human	ensembl	74_37	+1	known	silent	c.1236	p.S412	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESRRB	HGNC	ENSG00000119715				32	0	0	26	10	27.7778
SEL1L	0	genome.wustl.edu	37	14	81972485	81972485	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	14	81972485	81972485	T	G	SNP	SEL1L	ENST00000336735	human	ensembl	74_37	-1	known	missense	c.441	p.E147D	1.000	pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pfam_Sel1-like,pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_Sel1-like,pfscan_FN_type2_col-bd	-	no_errors	SEL1L	HGNC	ENSG00000071537				111	0	0	107	29	21.3235
SNRPN	0	genome.wustl.edu	37	15	25220656	25220656	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	15	25220656	25220656	A	C	SNP	SNRPN	ENST00000444203	human	ensembl	74_37	+1	known	missense	c.167	p.K56T	1.000	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc,pirsf_snRNP-assoc_SmB/SmN	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc,pirsf_snRNP-assoc_SmB/SmN	-	no_errors	SNRPN	HGNC	ENSG00000128739				96	0	0	47	41	46.5909
IDH3A	0	genome.wustl.edu	37	15	78461297	78461297	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	15	78461297	78461297	T	A	SNP	IDH3A	ENST00000299518	human	ensembl	74_37	+1	known	missense	c.1051	p.C351S	1.000	pfam_IsoPropMal-DH-like_dom,tigrfam_Isocitrate_DH_NAD	pfam_IsoPropMal-DH-like_dom,tigrfam_Isocitrate_DH_NAD	-	no_errors	IDH3A	HGNC	ENSG00000166411				192	0	0	99	74	42.7746
SPSB3	0	genome.wustl.edu	37	16	1828608	1828608	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	16	1828608	1828608	G	T	SNP	SPSB3	ENST00000301717	human	ensembl	74_37	-1	known	missense	c.132	p.S44R	0.432	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_SOCS_C,pfscan_B30.2/SPRY,pfscan_SOCS_C	-	no_errors	SPSB3	HGNC	ENSG00000162032				60	0	0	55	21	27.6316
APOBR	0	genome.wustl.edu	37	16	28507424	28507424	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	16	28507424	28507424	C	T	SNP	APOBR	ENST00000564831	human	ensembl	74_37	+1	known	silent	c.1062	p.A354	0.000	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730				22	0	0	21	5	19.2308
ZNF213	0	genome.wustl.edu	37	16	3190925	3190925	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	16	3190925	3190925	C	T	SNP	ZNF213	ENST00000396878	human	ensembl	74_37	+1	known	silent	c.957	p.C319	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF213	HGNC	ENSG00000085644				20	0	0	21	4	16
MMP2	0	genome.wustl.edu	37	16	55513517	55513517	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	16	55513517	55513517	C	T	SNP	MMP2	ENST00000219070	human	ensembl	74_37	+1	known	silent	c.126	p.A42	0.998	superfamily_Peptidoglycan-bd-like	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP2	HGNC	ENSG00000087245				39	0	0	63	8	11.2676
LPCAT2	0	genome.wustl.edu	37	16	55584873	55584873	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	16	55584873	55584873	T	A	SNP	LPCAT2	ENST00000262134	human	ensembl	74_37	+1	known	missense	c.1074	p.D358E	0.997	NULL	pfam_EF_hand_dom,pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	LPCAT2	HGNC	ENSG00000087253				86	0	0	39	12	23.5294
ANKRD11	0	genome.wustl.edu	37	16	89351692	89351692	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	16	89351692	89351692	C	T	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	missense	c.1258	p.V420M	0.915	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522				84	0	0	58	18	23.6842
ANKRD11	0	genome.wustl.edu	37	16	89357494	89357494	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	16	89357494	89357494	G	A	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	silent	c.324	p.G108	0.802	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522				81	0	0	116	17	12.782
PYY	0	genome.wustl.edu	37	17	42030487	42030487	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	17	42030487	42030487	C	T	SNP	PYY	ENST00000360085	human	ensembl	74_37	-1	known	missense	c.259	p.V87I	0.000	NULL	pfam_Pancreatic_hormone-like,smart_Pancreatic_hormone-like,pfscan_Pancreatic_hormone-like,prints_Pancreatic_hormone-like	-	no_errors	PYY	HGNC	ENSG00000131096				77	0	0	76	24	24
GP1BA	0	genome.wustl.edu	37	17	4837151	4837151	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	17	4837151	4837151	G	A	SNP	GP1BA	ENST00000329125	human	ensembl	74_37	+1	known	missense	c.1252	p.A418T	0.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	GP1BA	HGNC	ENSG00000185245				19	0	0	19	7	26.9231
MPO	0	genome.wustl.edu	37	17	56349209	56349209	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	17	56349209	56349209	T	G	SNP	MPO	ENST00000340482	human	ensembl	74_37	-1	known	missense	c.1933	p.T645P	0.001	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	MPO	HGNC	ENSG00000005381				99	0	0	61	63	50.8065
TP53	0	genome.wustl.edu	37	17	7577094	7577094	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	17	7577094	7577094	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.844	p.R282W	0.997	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				45	0	0	16	15	48.3871
LAMA1	0	genome.wustl.edu	37	18	7013889	7013889	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	18	7013889	7013889	C	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	silent	c.3288	p.G1096	0.996	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				21	0	0	41	6	12.766
PTPRM	0	genome.wustl.edu	37	18	8394487	8394487	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	18	8394487	8394487	C	T	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	missense	c.4225	p.R1409C	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482				33	0	0	26	13	33.3333
ABCA7	0	genome.wustl.edu	37	19	1052101	1052101	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	19	1052101	1052101	C	T	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	silent	c.3123	p.R1041	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687				34	0	0	38	8	17.3913
ADAT3	0	genome.wustl.edu	37	19	1912907	1912907	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	19	1912907	1912907	C	T	SNP	ADAT3	ENST00000329478	human	ensembl	74_37	+1	known	silent	c.861	p.D287	0.000	pfam_CMP_dCMP_Zn-bd,superfamily_Cytidine_deaminase-like	pfam_CMP_dCMP_Zn-bd,superfamily_Cytidine_deaminase-like	-	no_errors	ADAT3	HGNC	ENSG00000213638				50	0	0	58	29	33.3333
MKNK2	0	genome.wustl.edu	37	19	2043545	2043545	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	19	2043545	2043545	C	A	SNP	MKNK2	ENST00000250896	human	ensembl	74_37	-1	known	missense	c.376	p.V126F	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MKNK2	HGNC	ENSG00000099875				39	0	0	58	11	15.942
SPTBN4	0	genome.wustl.edu	37	19	41009902	41009902	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	19	41009902	41009902	C	T	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	missense	c.1528	p.R510C	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460				60	0	0	93	72	43.6364
CYP2A6	0	genome.wustl.edu	37	19	41354143	41354143	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	19	41354143	41354143	G	A	SNP	CYP2A6	ENST00000301141	human	ensembl	74_37	-1	known	missense	c.635	p.T212M	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A6	HGNC	ENSG00000255974				101	0	0	154	125	44.8029
LILRB1	0	genome.wustl.edu	37	19	55144127	55144127	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	19	55144127	55144127	G	A	SNP	LILRB1	ENST00000324602	human	ensembl	74_37	+1	known	missense	c.874	p.G292R	0.001	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB1	HGNC	ENSG00000104972				79	0	0	110	22	16.6667
ZNF329	0	genome.wustl.edu	37	19	58639529	58639529	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	19	58639529	58639529	T	C	SNP	ZNF329	ENST00000358067	human	ensembl	74_37	-1	known	missense	c.1342	p.T448A	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF329	HGNC	ENSG00000181894				68	0	0	38	22	36.6667
MUC16	0	genome.wustl.edu	37	19	9056839	9056839	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	19	9056839	9056839	A	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.30607	p.F10203V	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				66	0	0	49	12	19.6721
MUC16	0	genome.wustl.edu	37	19	9067293	9067293	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	19	9067293	9067293	A	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.20153	p.I6718T	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				241	0	0	213	71	25
POU3F3	0	genome.wustl.edu	37	2	105473289	105473289	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	105473289	105473289	G	A	SNP	POU3F3	ENST00000361360	human	ensembl	74_37	+1	known	missense	c.1321	p.D441N	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,prints_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F3	HGNC	ENSG00000198914				30	0	0	90	11	10.8911
TMEM177	0	genome.wustl.edu	37	2	120439335	120439335	+	Nonsense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	120439335	120439335	G	A	SNP	TMEM177	ENST00000272521	human	ensembl	74_37	+1	known	nonsense	c.906	p.W302*	0.928	NULL	NULL	-	no_errors	TMEM177	HGNC	ENSG00000144120				101	1	0.980392	153	29	15.9341
CXCR2P1	0	genome.wustl.edu	37	2	218925679	218925679	+	RNA	SNP	C	C	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	218925679	218925679	C	A	SNP	CXCR2P1	ENST00000439871	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.415	-	-	-	no_errors	CXCR2P1	HGNC	ENSG00000229754				14	0	0	28	3	9.67742
USP37	0	genome.wustl.edu	37	2	219319687	219319687	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	219319687	219319687	G	A	SNP	USP37	ENST00000258399	human	ensembl	74_37	-1	known	missense	c.2906	p.T969M	0.219	NULL	pfam_Peptidase_C19/C67,pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Peptidase_C19/C67	-	no_errors	USP37	HGNC	ENSG00000135913				104	0	0	90	25	21.7391
COL6A3	0	genome.wustl.edu	37	2	238280829	238280829	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	238280829	238280829	G	A	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	silent	c.3831	p.S1277	0.895	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				51	0	0	38	11	22.449
BIRC6	0	genome.wustl.edu	37	2	32703759	32703759	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	32703759	32703759	G	A	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	silent	c.7125	p.V2375	0.999	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760				70	0	0	57	11	16.1765
DHX57	0	genome.wustl.edu	37	2	39095333	39095333	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	39095333	39095333	C	T	SNP	DHX57	ENST00000295373	human	ensembl	74_37	-1	known	missense	c.215	p.R72H	0.002	NULL	pfam_RWD-domain,pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Znf_CCCH,superfamily_P-loop_NTPase,superfamily_UBA-like,superfamily_UBQ-conjugating_enzyme/RWD,smart_Znf_CCCH,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX57	HGNC	ENSG00000163214				78	0	0	45	12	21.0526
SLC8A1	0	genome.wustl.edu	37	2	40366764	40366764	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	40366764	40366764	G	A	SNP	SLC8A1	ENST00000332839	human	ensembl	74_37	-1	known	silent	c.2322	p.F774	0.924	tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,pfscan_DnaJ_domain,prints_Na_Ca_Ex,prints_NaCa_exhngr1,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A1	HGNC	ENSG00000183023				101	0	0	132	11	7.69231
LRPPRC	0	genome.wustl.edu	37	2	44175646	44175646	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	44175646	44175646	A	G	SNP	LRPPRC	ENST00000260665	human	ensembl	74_37	-1	known	missense	c.1747	p.Y583H	1.000	NULL	pfam_Pentatricopeptide_repeat,tigrfam_Pentatricopeptide_repeat	-	no_errors	LRPPRC	HGNC	ENSG00000138095				50	0	0	27	16	37.2093
RPS27A	0	genome.wustl.edu	37	2	55462594	55462594	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	55462594	55462594	C	T	SNP	RPS27A	ENST00000272317	human	ensembl	74_37	+1	known	missense	c.352	p.R118C	1.000	pfam_Ribosomal_S27a	pfam_Ubiquitin_dom,pfam_Ribosomal_S27a,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	RPS27A	HGNC	ENSG00000143947				142	0	0	117	11	8.59375
CNNM4	0	genome.wustl.edu	37	2	97463383	97463383	+	Silent	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	97463383	97463383	A	G	SNP	CNNM4	ENST00000377075	human	ensembl	74_37	+1	known	silent	c.1680	p.T560	0.677	NULL	pfam_DUF21,pfam_CBS_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	CNNM4	HGNC	ENSG00000158158				41	0	0	81	14	14.7368
KIAA1211L	0	genome.wustl.edu	37	2	99439439	99439439	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	99439439	99439439	G	A	SNP	KIAA1211L	ENST00000397899	human	ensembl	74_37	-1	known	missense	c.1297	p.R433C	0.000	NULL	NULL	-	no_errors	KIAA1211L	HGNC	ENSG00000196872				14	0	0	22	4	15.3846
XRN2	0	genome.wustl.edu	37	20	21321389	21321389	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	20	21321389	21321389	A	C	SNP	XRN2	ENST00000377191	human	ensembl	74_37	+1	known	missense	c.1309	p.I437L	1.000	pirsf_5_3_exoribonuclease_2	pfam_Put_53exo,superfamily_Znf_CCHC,pirsf_5_3_exoribonuclease_2	-	no_errors	XRN2	HGNC	ENSG00000088930				102	0	0	60	8	11.7647
CPXM1	0	genome.wustl.edu	37	20	2775009	2775009	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	20	2775009	2775009	A	G	SNP	CPXM1	ENST00000380605	human	ensembl	74_37	-1	known	missense	c.2032	p.Y678H	1.000	superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	CPXM1	HGNC	ENSG00000088882				49	0	0	65	14	17.7215
DSN1	0	genome.wustl.edu	37	20	35399407	35399407	+	Nonsense_Mutation	SNP	G	G	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	20	35399407	35399407	G	T	SNP	DSN1	ENST00000373745	human	ensembl	74_37	-1	known	nonsense	c.224	p.S75*	0.029	NULL	pfam_Dsn1/Mis13	-	no_errors	DSN1	HGNC	ENSG00000149636				205	0	0	143	45	23.9362
KCNB1	0	genome.wustl.edu	37	20	48098751	48098751	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	20	48098751	48098751	C	T	SNP	KCNB1	ENST00000371741	human	ensembl	74_37	-1	known	silent	c.267	p.P89	0.235	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.1,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB1	HGNC	ENSG00000158445				47	0	0	89	5	5.31915
APCDD1L	0	genome.wustl.edu	37	20	57042265	57042265	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	20	57042265	57042265	G	C	SNP	APCDD1L	ENST00000439429	human	ensembl	74_37	-1	known	missense	c.671	p.P224R	0.000	NULL	NULL	-	no_errors	APCDD1L	HGNC	ENSG00000198768				17	0	0	41	11	21.1538
DIDO1	0	genome.wustl.edu	37	20	61537350	61537350	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	20	61537350	61537350	C	T	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.1477	p.G493R	0.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191				145	0	0	159	17	9.65909
CHRNA4	0	genome.wustl.edu	37	20	61981969	61981969	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	20	61981969	61981969	A	G	SNP	CHRNA4	ENST00000370263	human	ensembl	74_37	-1	known	missense	c.794	p.F265S	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA4	HGNC	ENSG00000101204				68	0	0	74	30	28.8462
TIAM1	0	genome.wustl.edu	37	21	32493030	32493030	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	21	32493030	32493030	C	T	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	missense	c.4432	p.G1478R	0.995	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299				57	0	0	42	39	48.1481
OR11H1	0	genome.wustl.edu	37	22	16449539	16449539	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	22	16449539	16449539	A	G	SNP	OR11H1	ENST00000252835	human	ensembl	74_37	-1	known	missense	c.266	p.V89A	0.234	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR11H1	HGNC	ENSG00000130538				57	0	0	33	10	23.2558
PCOLCE2	0	genome.wustl.edu	37	3	142567084	142567084	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	3	142567084	142567084	G	T	SNP	PCOLCE2	ENST00000295992	human	ensembl	74_37	-1	known	missense	c.423	p.F141L	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Netrin_module_non-TIMP,superfamily_CUB_dom,superfamily_TIMP-like_OB-fold,smart_CUB_dom,smart_Netrin_module_non-TIMP,pfscan_CUB_dom,pfscan_Netrin_domain	-	no_errors	PCOLCE2	HGNC	ENSG00000163710				68	0	0	44	10	18.5185
STAC	0	genome.wustl.edu	37	3	36422159	36422159	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	3	36422159	36422159	C	T	SNP	STAC	ENST00000273183	human	ensembl	74_37	+1	known	silent	c.24	p.R8	0.901	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_SH3_domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	STAC	HGNC	ENSG00000144681				14	0	0	14	3	17.6471
UBA7	0	genome.wustl.edu	37	3	49848017	49848017	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	3	49848017	49848017	A	G	SNP	UBA7	ENST00000333486	human	ensembl	74_37	-1	known	missense	c.1400	p.V467A	0.981	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_UBact_repeat,pfam_Ub-activating_enz_e1_C,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA7	HGNC	ENSG00000182179				241	1	0.413223	200	66	24.812
SEC24B	0	genome.wustl.edu	37	4	110415869	110415869	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	4	110415869	110415869	G	A	SNP	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	missense	c.1345	p.V449I	0.000	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802				94	0	0	96	13	11.9266
ANK2	0	genome.wustl.edu	37	4	114251533	114251533	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	4	114251533	114251533	G	A	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	missense	c.3032	p.R1011H	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				40	0	0	41	8	16.3265
NR3C2	0	genome.wustl.edu	37	4	149075976	149075976	+	Silent	SNP	T	T	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	4	149075976	149075976	T	G	SNP	NR3C2	ENST00000355292	human	ensembl	74_37	-1	known	silent	c.2103	p.P701	0.111	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR3C2	HGNC	ENSG00000151623				16	0	0	38	20	34.4828
DCHS2	0	genome.wustl.edu	37	4	155241936	155241936	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	4	155241936	155241936	C	T	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	missense	c.3250	p.G1084S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410				154	1	0.645161	119	16	11.8519
FRG1	0	genome.wustl.edu	37	4	190874255	190874255	+	Missense_Mutation	SNP	A	A	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	4	190874255	190874255	A	T	SNP	FRG1	ENST00000226798	human	ensembl	74_37	+1	known	missense	c.292	p.T98S	1.000	pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking	pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FRG1	HGNC	ENSG00000109536				34	0	0	29	4	12.1212
TENM2	0	genome.wustl.edu	37	5	167689445	167689445	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	5	167689445	167689445	C	A	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.7955	p.S2652Y	0.997	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934				8	0	0	6	3	33.3333
ADAMTS2	0	genome.wustl.edu	37	5	178552039	178552039	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	5	178552039	178552039	C	T	SNP	ADAMTS2	ENST00000251582	human	ensembl	74_37	-1	known	missense	c.2893	p.E965K	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS2,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS2	HGNC	ENSG00000087116				127	0	0	137	8	5.51724
CDH18	0	genome.wustl.edu	37	5	19838948	19838948	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	5	19838948	19838948	G	A	SNP	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	missense	c.148	p.R50C	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526				55	0	0	36	5	12.1951
HCN1	0	genome.wustl.edu	37	5	45396782	45396782	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	5	45396782	45396782	C	T	SNP	HCN1	ENST00000303230	human	ensembl	74_37	-1	known	missense	c.1042	p.A348T	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN1	HGNC	ENSG00000164588				58	0	0	73	7	8.75
IQGAP2	0	genome.wustl.edu	37	5	75993866	75993866	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	5	75993866	75993866	C	T	SNP	IQGAP2	ENST00000274364	human	ensembl	74_37	+1	known	missense	c.4261	p.L1421F	1.000	pfam_RasGAP_C	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP2	HGNC	ENSG00000145703				42	0	0	23	4	14.8148
GRM1	0	genome.wustl.edu	37	6	146720426	146720426	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	6	146720426	146720426	C	T	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	silent	c.2251	p.L751	0.997	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				96	0	0	51	68	57.1429
PPIL4	0	genome.wustl.edu	37	6	149862660	149862660	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	6	149862660	149862660	C	G	SNP	PPIL4	ENST00000253329	human	ensembl	74_37	-1	known	missense	c.133	p.V45L	1.000	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,pfam_RRM_dom,superfamily_Cyclophilin-like_PPIase_dom,smart_RRM_dom,pfscan_RRM_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIL4	HGNC	ENSG00000131013				51	0	0	50	8	13.7931
T	0	genome.wustl.edu	37	6	166580185	166580185	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	6	166580185	166580185	G	A	SNP	T	ENST00000296946	human	ensembl	74_37	-1	known	silent	c.366	p.C122	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_Brachyury,pfscan_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_Brachyury,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	T	HGNC	ENSG00000164458				94	0	0	81	15	15.625
GPANK1	0	genome.wustl.edu	37	6	31631743	31631743	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	6	31631743	31631743	C	T	SNP	GPANK1	ENST00000375893	human	ensembl	74_37	-1	known	silent	c.513	p.G171	0.090	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_G_patch_dom,superfamily_Ankyrin_rpt-contain_dom,smart_G_patch_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_G_patch_dom	-	no_errors	GPANK1	HGNC	ENSG00000204438				56	0	0	39	33	45.8333
PKHD1	0	genome.wustl.edu	37	6	51619732	51619732	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	6	51619732	51619732	T	C	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.8647	p.I2883V	0.848	NULL	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				84	0	0	55	55	50
CD109	0	genome.wustl.edu	37	6	74446106	74446106	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	6	74446106	74446106	G	T	SNP	CD109	ENST00000287097	human	ensembl	74_37	+1	known	missense	c.508	p.D170Y	1.000	pfam_A2M_N	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	CD109	HGNC	ENSG00000156535				155	0	0	102	15	12.8205
CD109	0	genome.wustl.edu	37	6	74446205	74446205	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	6	74446205	74446205	G	A	SNP	CD109	ENST00000287097	human	ensembl	74_37	+1	known	missense	c.607	p.D203N	1.000	pfam_A2M_N	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	CD109	HGNC	ENSG00000156535				164	0	0	134	13	8.84354
CD109	0	genome.wustl.edu	37	6	74446228	74446228	+	Silent	SNP	G	G	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	6	74446228	74446228	G	T	SNP	CD109	ENST00000287097	human	ensembl	74_37	+1	known	silent	c.630	p.V210	1.000	pfam_A2M_N	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	CD109	HGNC	ENSG00000156535				157	0	0	121	17	12.3188
LRWD1	0	genome.wustl.edu	37	7	102109363	102109363	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	102109363	102109363	G	A	SNP	LRWD1	ENST00000292616	human	ensembl	74_37	+1	known	missense	c.1082	p.R361H	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_Leu-rich_rpt,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LRWD1	HGNC	ENSG00000161036				45	0	0	38	4	9.52381
FAM3C	0	genome.wustl.edu	37	7	121012194	121012194	+	Splice_Site	SNP	C	C	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	121012194	121012194	C	A	SNP	FAM3C	ENST00000359943	human	ensembl	74_37	-1	known	splice_site	c.119-1	e3-1	1.000	-	-	-	no_errors	FAM3C	HGNC	ENSG00000196937				25	0	0	18	2	10
KCNH2	0	genome.wustl.edu	37	7	150648900	150648900	+	Silent	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	150648900	150648900	C	T	SNP	KCNH2	ENST00000262186	human	ensembl	74_37	-1	known	silent	c.1581	p.A527	0.828	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118				39	0	0	53	13	19.697
HOXA6	0	genome.wustl.edu	37	7	27185407	27185407	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	27185407	27185407	G	A	SNP	HOXA6	ENST00000222728	human	ensembl	74_37	-1	known	missense	c.572	p.A191V	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXA6	HGNC	ENSG00000106006				187	0	0	155	191	55.2023
HOXA7	0	genome.wustl.edu	37	7	27194773	27194773	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	27194773	27194773	G	A	SNP	HOXA7	ENST00000242159	human	ensembl	74_37	-1	known	missense	c.448	p.H150Y	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXA7	HGNC	ENSG00000122592				135	0	0	122	156	56.1151
SDK1	0	genome.wustl.edu	37	7	4011158	4011158	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	4011158	4011158	C	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.1775	p.T592M	0.221	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				20	0	0	31	3	8.82353
SDK1	0	genome.wustl.edu	37	7	4272903	4272903	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	4272903	4272903	C	A	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.5844	p.D1948E	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				57	0	0	102	8	7.27273
ABCA13	0	genome.wustl.edu	37	7	48259063	48259063	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	48259063	48259063	A	G	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.400	p.N134D	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869				107	0	0	177	26	12.8079
GTF2IRD1	0	genome.wustl.edu	37	7	73922447	73922447	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	73922447	73922447	A	G	SNP	GTF2IRD1	ENST00000265755	human	ensembl	74_37	+1	known	missense	c.37	p.N13D	0.392	pirsf_TF_II-I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	-	no_errors	GTF2IRD1	HGNC	ENSG00000006704				58	0	0	39	14	26.4151
GTF2IRD2B	0	genome.wustl.edu	37	7	74538990	74538990	+	Nonsense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	7	74538990	74538990	C	T	SNP	GTF2IRD2B	ENST00000312575	human	ensembl	74_37	+1	known	nonsense	c.412	p.R138*	0.012	pfam_GTF2I,superfamily_GTF2I,pfscan_GTF2I	pfam_GTF2I,superfamily_GTF2I,superfamily_RNaseH-like_dom,pfscan_GTF2I	-	no_errors	GTF2IRD2B	HGNC	ENSG00000174428				37	0	0	42	7	14.2857
EFR3A	0	genome.wustl.edu	37	8	133014047	133014047	+	Missense_Mutation	SNP	A	A	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	8	133014047	133014047	A	T	SNP	EFR3A	ENST00000254624	human	ensembl	74_37	+1	known	missense	c.2199	p.K733N	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	EFR3A	HGNC	ENSG00000132294				69	0	0	47	5	9.61538
TG	0	genome.wustl.edu	37	8	133885383	133885383	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	8	133885383	133885383	G	A	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	silent	c.555	p.A185	0.000	superfamily_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832				45	0	0	57	5	8.06452
MMP16	0	genome.wustl.edu	37	8	89209481	89209481	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	8	89209481	89209481	G	T	SNP	MMP16	ENST00000286614	human	ensembl	74_37	-1	known	missense	c.187	p.L63M	1.000	pirsf_Pept_M10A_Metazoans,pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP16	HGNC	ENSG00000156103				35	0	0	51	7	12.069
CNTRL	0	genome.wustl.edu	37	9	123935999	123935999	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	9	123935999	123935999	G	A	SNP	CNTRL	ENST00000238341	human	ensembl	74_37	+1	known	missense	c.6731	p.R2244Q	0.551	NULL	pfam_Leu-rich_rpt,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	CNTRL	HGNC	ENSG00000119397				163	0	0	227	28	10.9804
CBWD1	0	genome.wustl.edu	37	9	178910	178910	+	Silent	SNP	A	A	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	9	178910	178910	A	T	SNP	CBWD1	ENST00000356521	human	ensembl	74_37	-1	known	silent	c.60	p.P20	0.925	NULL	pfam_CobW/HypB/UreG_dom,pfam_Cbl_biosynth_CobW-like_C,superfamily_P-loop_NTPase,superfamily_Cbl_biosynth_CobW-like_C	-	no_errors	CBWD1	HGNC	ENSG00000172785				147	0	0	134	17	11.2583
DENND4C	0	genome.wustl.edu	37	9	19346918	19346918	+	Missense_Mutation	SNP	A	A	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	9	19346918	19346918	A	T	SNP	DENND4C	ENST00000602925	human	ensembl	74_37	+1	known	missense	c.4004	p.H1335L	0.995	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4C	HGNC	ENSG00000137145				45	0	0	26	4	13.3333
FOCAD	0	genome.wustl.edu	37	9	20923662	20923662	+	Silent	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	9	20923662	20923662	G	A	SNP	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	silent	c.2856	p.E952	0.998	superfamily_ARM-type_fold	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				21	0	0	26	4	13.3333
GLIPR2	0	genome.wustl.edu	37	9	36150911	36150911	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	9	36150911	36150911	A	G	SNP	GLIPR2	ENST00000377960	human	ensembl	74_37	+1	known	missense	c.269	p.Y90C	1.000	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	GLIPR2	HGNC	ENSG00000122694				43	0	0	47	12	20.339
ERMP1	0	genome.wustl.edu	37	9	5797844	5797844	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	9	5797844	5797844	A	C	SNP	ERMP1	ENST00000339450	human	ensembl	74_37	-1	known	missense	c.2359	p.S787A	1.000	NULL	pfam_Peptidase_M28,pfam_Peptidase_M20	-	no_errors	ERMP1	HGNC	ENSG00000099219				95	0	0	84	23	21.4953
SPATA31D1	0	genome.wustl.edu	37	9	84607801	84607801	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	9	84607801	84607801	G	A	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	missense	c.2416	p.E806K	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929				84	0	0	85	7	7.6087
NGFRAP1	0	genome.wustl.edu	37	X	102632528	102632528	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	X	102632528	102632528	C	T	SNP	NGFRAP1	ENST00000299872	human	ensembl	74_37	+1	known	missense	c.109	p.R37W	0.000	pfam_TF_A-like/BEX-like,pirsf_BEX	pfam_TF_A-like/BEX-like,pirsf_BEX	-	no_errors	NGFRAP1	HGNC	ENSG00000166681				157	0	0	156	87	35.8025
DCAF12L1	0	genome.wustl.edu	37	X	125686062	125686062	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	X	125686062	125686062	T	A	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	missense	c.530	p.Y177F	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				35	0	0	40	14	25.9259
GPR101	0	genome.wustl.edu	37	X	136113307	136113307	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	X	136113307	136113307	T	C	SNP	GPR101	ENST00000298110	human	ensembl	74_37	-1	known	missense	c.527	p.D176G	0.993	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR101	HGNC	ENSG00000165370				35	0	0	11	13	54.1667
MTMR1	0	genome.wustl.edu	37	X	149905164	149905164	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	X	149905164	149905164	G	A	SNP	MTMR1	ENST00000445323	human	ensembl	74_37	+1	known	missense	c.1178	p.R393H	0.946	NULL	pfam_Myotubularin-like_Pase_dom,pfam_GRAM,smart_GRAM,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR1	HGNC	ENSG00000063601				39	0	0	13	23	63.8889
WASH6P	0	genome.wustl.edu	37	X	155254828	155254828	+	RNA	SNP	T	T	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	X	155254828	155254828	T	C	SNP	WASH6P	ENST00000461007	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.038	-	-	-	no_errors	WASH6P	HGNC	ENSG00000182484				8	0	0	7	7	50
KDM6A	0	genome.wustl.edu	37	X	44733193	44733193	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	X	44733193	44733193	T	C	SNP	KDM6A	ENST00000382899	human	ensembl	74_37	+1	known	missense	c.185	p.F62S	1.000	NULL	pfam_JmjC_dom,pfam_TPR_1,smart_TPR_repeat,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KDM6A	HGNC	ENSG00000147050				19	0	0	15	11	42.3077
C1orf56	0	genome.wustl.edu	37	1	151021328	151021331	+	Frame_Shift_Del	DEL	AGTA	AGTA	-			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	AGTA	AGTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	151021328	151021331	AGTA	-	DEL	C1orf56	ENST00000368926	human	ensembl	74_37	+1	known	frame_shift_del	c.1005	p.I336fs	1.000	NULL	superfamily_Thrombospondin_1_rpt	-	no_errors	C1orf56	HGNC	ENSG00000143443				97	0	0	66	31	31.9588
FLG-AS1	0	genome.wustl.edu	37	1	152287342	152287342	+	RNA	DEL	T	T	-			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	152287342	152287342	T	-	DEL	FLG-AS1	ENST00000392688	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FLG-AS1	HGNC	ENSG00000237975				12	0	0	15	3	16.6667
BRINP2	0	genome.wustl.edu	37	1	177250855	177250856	+	RNA	INS	-	-	AC			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	1	177250855	177250856	-	AC	INS	BRINP2	ENST00000478325	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	BRINP2	HGNC	ENSG00000198797				9	0	0	7	4	36.3636
OR8B3	0	genome.wustl.edu	37	11	124266426	124266428	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	11	124266426	124266428	AGA	-	DEL	OR8B3	ENST00000354597	human	ensembl	74_37	-1	known	in_frame_del	c.822_820	p.S274in_frame_del	0.701:0.967:0.969	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8B3	HGNC	ENSG00000196661				134	0	0	92	8	8
EP400	0	genome.wustl.edu	37	12	132547093	132547094	+	In_Frame_Ins	INS	-	-	CAG			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	132547093	132547094	-	CAG	INS	EP400	ENST00000333577	human	ensembl	74_37	+1	known	in_frame_ins	c.8289_8290	p.2767in_frame_insQ	0.900:0.920	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				57	0	0	90	30	25
SUOX	0	genome.wustl.edu	37	12	56397724	56397739	+	Frame_Shift_Del	DEL	CAGCCCTGAAGGTCAA	CAGCCCTGAAGGTCAA	-			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	CAGCCCTGAAGGTCAA	CAGCCCTGAAGGTCAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	12	56397724	56397739	CAGCCCTGAAGGTCAA	-	DEL	SUOX	ENST00000266971	human	ensembl	74_37	+1	known	frame_shift_del	c.551_566	p.L186fs	1.000:0.985:1.000:0.992:0.982:1.000:1.000:0.940:0.939:0.926:0.911:0.986:1.000:1.000:1.000:1.000	superfamily_OxRdtase_Mopterin-bd_dom,prints_Mopterin_OxRdtase_euk	pfam_OxRdtase_Mopterin-bd_dom,pfam_MoCF_OxRdtse_dimer,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_OxRdtase_Mopterin-bd_dom,superfamily_Ig_E-set,superfamily_Cyt_B5-like_heme/steroid-bd,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Mopterin_OxRdtase_euk,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	SUOX	HGNC	ENSG00000139531				71	0	0	84	6	6.66667
INF2	0	genome.wustl.edu	37	14	105174270	105174271	+	Frame_Shift_Ins	INS	-	-	G			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	14	105174270	105174271	-	G	INS	INF2	ENST00000392634	human	ensembl	74_37	+1	known	frame_shift_ins	c.1666_1667	p.V557fs	0.000:0.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485				75	0	0	81	9	10
MBIP	0	genome.wustl.edu	37	14	36770037	36770037	+	RNA	DEL	A	A	-			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	14	36770037	36770037	A	-	DEL	MBIP	ENST00000604154	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.241	-	-	-	no_errors	MBIP	HGNC	ENSG00000151332				10	0	0	15	4	21.0526
CLIP4	0	genome.wustl.edu	37	2	29404635	29404637	+	In_Frame_Del	DEL	ATG	ATG	-			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	ATG	ATG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	2	29404635	29404637	ATG	-	DEL	CLIP4	ENST00000320081	human	ensembl	74_37	+1	known	in_frame_del	c.1994_1996	p.D666in_frame_del	1.000:0.998:1.000	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	pfam_CAP-Gly_domain,pfam_Ankyrin_rpt,superfamily_CAP-Gly_domain,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_CAP-Gly_domain	-	no_errors	CLIP4	HGNC	ENSG00000115295				108	0	0	155	9	5.4878
MND1	0	genome.wustl.edu	37	4	154315457	154315457	+	Frame_Shift_Del	DEL	T	T	-			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	4	154315457	154315457	T	-	DEL	MND1	ENST00000240488	human	ensembl	74_37	+1	known	frame_shift_del	c.320	p.I107fs	0.996	pfam_Mnd1,pfam_BlaI_family,pirsf_Mnd1	pfam_Mnd1,pfam_BlaI_family,pirsf_Mnd1	-	no_errors	MND1	HGNC	ENSG00000121211				43	0	0	21	6	22.2222
ANTXR2	0	genome.wustl.edu	37	4	80905990	80905990	+	Frame_Shift_Del	DEL	C	C	-			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	4	80905990	80905990	C	-	DEL	ANTXR2	ENST00000307333	human	ensembl	74_37	-1	known	frame_shift_del	c.1069	p.A357fs	0.559	pirsf_Anthrax_toxin_rcpt	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_C,pfam_Anthrax_toxin_rcpt_extracel,pfam_VWF_A,superfamily_Ig_E-set,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXR2	HGNC	ENSG00000163297				17	0	0	16	2	11.1111
MRPL13	0	genome.wustl.edu	37	8	121444341	121444343	+	In_Frame_Del	DEL	AAC	AAC	-			TCGA-FP-A4BF-01A-12D-A24D-08	TCGA-FP-A4BF-10A-01D-A24F-08	AAC	AAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e806a8c8-b396-481c-a75c-307f0681019a	8868a8d7-86af-4602-9d9f-4c06dc473b51	8	121444341	121444343	AAC	-	DEL	MRPL13	ENST00000306185	human	ensembl	74_37	-1	known	in_frame_del	c.174_172	p.V58in_frame_del	1.000:1.000:1.000	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,pirsf_Ribosomal_L13,tigrfam_Ribosomal_L13_bac-type	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,pirsf_Ribosomal_L13,tigrfam_Ribosomal_L13_bac-type	-	no_errors	MRPL13	HGNC	ENSG00000172172				97	0	0	151	10	6.21118
