Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AMPH	0	genome.wustl.edu	37	7	38530700	38530700	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	7	38530700	38530700	C	T	SNP	AMPH	ENST00000356264	human	ensembl	74_37	-1	known	missense	c.346	p.G116R	1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_Amphiphysin,prints_Amphiphysin_1,prints_SH3_domain	-	no_errors	AMPH	HGNC	ENSG00000078053	tier1	-	-	186	0	0.00	136	31	18.45
ANK1	0	genome.wustl.edu	37	8	41554025	41554025	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	8	41554025	41554025	G	A	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.2816	p.P939L	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534	tier1	-	-	56	0	0.00	49	8	14.04
ARID4B	0	genome.wustl.edu	37	1	235359426	235359426	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	235359426	235359426	C	T	SNP	ARID4B	ENST00000264183	human	ensembl	74_37	-1	known	missense	c.1846	p.D616N	1.000	pfam_Tudor-knot,superfamily_Chromodomain-like,smart_Tudor	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4B	HGNC	ENSG00000054267	tier1	-	-	91	0	0.00	73	18	19.78
ASUN	0	genome.wustl.edu	37	12	27078742	27078742	+	Silent	SNP	G	G	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	12	27078742	27078742	G	C	SNP	ASUN	ENST00000261191	human	ensembl	74_37	-1	known	silent	c.627	p.T209	1.000	pfam_Cell_cycle_regulator_Mat89Bb	pfam_Cell_cycle_regulator_Mat89Bb	-	no_errors	ASUN	HGNC	ENSG00000064102	tier1	-	-	73	0	0.00	69	6	8.00
AZI2	0	genome.wustl.edu	37	3	28365808	28365808	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	3	28365808	28365808	G	A	SNP	AZI2	ENST00000479665	human	ensembl	74_37	-1	known	missense	c.904	p.P302S	0.303	NULL	NULL	-	no_errors	AZI2	HGNC	ENSG00000163512	tier1	-	-	115	0	0.00	82	19	18.81
C1S	0	genome.wustl.edu	37	12	7172542	7172542	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	12	7172542	7172542	G	A	SNP	C1S	ENST00000328916	human	ensembl	74_37	+1	known	missense	c.656	p.R219Q	0.007	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	C1S	HGNC	ENSG00000182326	tier1	rs147341600	-	44	0	0.00	47	14	22.95
CACNG3	0	genome.wustl.edu	37	16	24358121	24358121	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	16	24358121	24358121	C	A	SNP	CACNG3	ENST00000005284	human	ensembl	74_37	+1	known	missense	c.278	p.T93K	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	-	no_errors	CACNG3	HGNC	ENSG00000006116	tier1	-	-	45	0	0.00	33	6	15.38
CCDC138	0	genome.wustl.edu	37	2	109492579	109492579	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	109492579	109492579	A	G	SNP	CCDC138	ENST00000295124	human	ensembl	74_37	+1	known	missense	c.1868	p.H623R	0.998	NULL	NULL	-	no_errors	CCDC138	HGNC	ENSG00000163006				40	0	0.00	38	4	9.52
CD1D	0	genome.wustl.edu	37	1	158151833	158151833	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	158151833	158151833	C	A	SNP	CD1D	ENST00000368171	human	ensembl	74_37	+1	known	missense	c.340	p.L114I	0.036	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1D	HGNC	ENSG00000158473	tier1	-	-	151	0	0.00	107	6	5.31
CD2	0	genome.wustl.edu	37	1	117297370	117297370	+	Frame_Shift_Del	DEL	A	A	-			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	117297370	117297370	A	-	DEL	CD2	ENST00000369478	human	ensembl	74_37	+1	known	frame_shift_del	c.179	p.T62fs	0.000	pfam_Ig_V-set	pfam_Ig_C2-set,pfam_Ig_V-set,prints_CD2	-	no_errors	CD2	HGNC	ENSG00000116824	tier1			41	0	0.00	28	11	28.21
CDH1	0	genome.wustl.edu	37	16	68842633	68842633	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	16	68842633	68842633	A	G	SNP	CDH1	ENST00000261769	human	ensembl	74_37	+1	known	missense	c.569	p.Y190C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	tier1	-	-	67	0	0.00	48	17	26.15
CDH12	0	genome.wustl.edu	37	5	21842426	21842426	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	21842426	21842426	T	C	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	missense	c.658	p.T220A	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162	tier1	-	-	56	0	0.00	31	9	22.50
CEMP1	0	genome.wustl.edu	37	16	2580834	2580834	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	16	2580834	2580834	G	A	SNP	CEMP1	ENST00000382350	human	ensembl	74_37	-1	known	missense	c.241	p.R81C	0.000	NULL	NULL	-	no_errors	CEMP1	HGNC	ENSG00000205923	tier1	-	-	49	0	0.00	22	5	18.52
CHD1L	0	genome.wustl.edu	37	1	146726622	146726622	+	Missense_Mutation	SNP	A	A	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	146726622	146726622	A	T	SNP	CHD1L	ENST00000369258	human	ensembl	74_37	+1	known	missense	c.338	p.E113V	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Macro_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	CHD1L	HGNC	ENSG00000131778	tier1	-	-	94	0	0.00	58	6	9.38
CHD3	0	genome.wustl.edu	37	17	7801857	7801859	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	17	7801857	7801859	AAG	-	DEL	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	in_frame_del	c.2095_2097	p.K702in_frame_del	1.000:1.000:1.000	superfamily_P-loop_NTPase	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004	tier1			37	0	0.00	21	3	12.50
CHD9	0	genome.wustl.edu	37	16	53276863	53276863	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	16	53276863	53276863	G	A	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	missense	c.2989	p.D997N	1.000	pfam_SNF2_N,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	tier1	-	-	118	0	0.00	85	13	13.27
CNKSR3	0	genome.wustl.edu	37	6	154732218	154732218	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	6	154732218	154732218	C	A	SNP	CNKSR3	ENST00000607772	human	ensembl	74_37	-1	known	missense	c.1129	p.G377C	0.514	pfam_CNKSR2	pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,pfscan_PDZ,pfscan_SAM	-	no_errors	CNKSR3	HGNC	ENSG00000153721	tier1	-	-	66	0	0.00	44	6	12.00
COL4A2	0	genome.wustl.edu	37	13	111088642	111088642	+	Silent	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	13	111088642	111088642	C	T	SNP	COL4A2	ENST00000360467	human	ensembl	74_37	+1	known	silent	c.753	p.N251	0.377	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A2	HGNC	ENSG00000134871	tier1	-	-	67	0	0.00	46	5	9.80
CRMP1	0	genome.wustl.edu	37	4	5862882	5862882	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	4	5862882	5862882	C	A	SNP	CRMP1	ENST00000324989	human	ensembl	74_37	-1	known	missense	c.526	p.G176W	1.000	superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	CRMP1	HGNC	ENSG00000072832	tier1	-	-	180	0	0.00	126	30	19.23
CSMD3	0	genome.wustl.edu	37	8	113267523	113267523	+	Silent	SNP	T	T	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	8	113267523	113267523	T	C	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.9996	p.Q3332	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	64	0	0.00	59	4	6.35
CSMD3	0	genome.wustl.edu	37	8	113599332	113599332	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	8	113599332	113599332	G	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.3848	p.A1283D	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	57	0	0.00	43	11	20.37
CSMD3	0	genome.wustl.edu	37	8	114389010	114389010	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	8	114389010	114389010	G	T	SNP	CSMD3	ENST00000343508	human	ensembl	74_37	-1	known	missense	c.15	p.F5L	0.992	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	72	0	0.00	78	11	12.36
DCAF11	0	genome.wustl.edu	37	14	24584818	24584818	+	Silent	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	14	24584818	24584818	C	T	SNP	DCAF11	ENST00000446197	human	ensembl	74_37	+1	known	silent	c.15	p.N5	0.985	pirsf_WD_repeat_p23	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_WD_repeat_p23,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	DCAF11	HGNC	ENSG00000100897	tier1	-	-	84	0	0.00	59	12	16.90
DIAPH3	0	genome.wustl.edu	37	13	60707105	60707105	+	Silent	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	13	60707105	60707105	G	A	SNP	DIAPH3	ENST00000400324	human	ensembl	74_37	-1	known	silent	c.199	p.L67	1.000	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH3	HGNC	ENSG00000139734	tier1	-	-	52	0	0.00	29	9	23.68
DMD	0	genome.wustl.edu	37	X	32305763	32305763	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	X	32305763	32305763	T	G	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.6173	p.K2058T	0.981	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	39	0	0.00	22	9	29.03
DNAH5	0	genome.wustl.edu	37	5	13719037	13719037	+	Silent	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	13719037	13719037	G	A	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	silent	c.12453	p.N4151	0.905	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	79	0	0.00	74	11	12.94
DNAJC24	0	genome.wustl.edu	37	11	31447909	31447909	+	RNA	DEL	T	T	-			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	11	31447909	31447909	T	-	DEL	DNAJC24	ENST00000524747	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	DNAJC24	HGNC	ENSG00000170946	tier1			41	0	0.00	26	4	13.33
DNMT3A	0	genome.wustl.edu	37	2	25505422	25505422	+	Silent	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	25505422	25505422	G	A	SNP	DNMT3A	ENST00000264709	human	ensembl	74_37	-1	known	silent	c.336	p.G112	0.998	NULL	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3A	HGNC	ENSG00000119772	tier1	-	-	60	0	0.00	42	6	12.50
DOCK2	0	genome.wustl.edu	37	5	169504759	169504759	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	169504759	169504759	C	T	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	missense	c.4912	p.R1638C	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516	tier1	-	-	50	0	0.00	34	4	10.53
DYRK1A	0	genome.wustl.edu	37	21	38878411	38878411	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	21	38878411	38878411	C	T	SNP	DYRK1A	ENST00000398960	human	ensembl	74_37	+1	known	missense	c.1556	p.S519L	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1A	HGNC	ENSG00000157540	tier1	-	-	26	0	0.00	24	4	14.29
ENSG00000267784	0	genome.wustl.edu	37	2	179588956	179588956	+	RNA	DEL	T	T	-			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	179588956	179588956	T	-	DEL	ENSG00000267784	ENST00000590024	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-171I2.1	Clone_based_vega_gene	ENSG00000267784	tier1			27	0	0.00	18	4	18.18
ERLEC1	0	genome.wustl.edu	37	2	54035494	54035494	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	54035494	54035494	T	C	SNP	ERLEC1	ENST00000185150	human	ensembl	74_37	+1	known	missense	c.938	p.I313T	0.981	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	ERLEC1	HGNC	ENSG00000068912	tier1	-	-	67	0	0.00	68	9	11.69
ERVFRD-1	0	genome.wustl.edu	37	6	11105167	11105167	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	6	11105167	11105167	C	G	SNP	ERVFRD-1	ENST00000472091	human	ensembl	74_37	-1	known	missense	c.377	p.C126S	0.277	NULL	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVFRD-1	HGNC	ENSG00000244476	tier1	-	-	200	0	0.00	125	23	15.54
FAM19A2	0	genome.wustl.edu	37	12	62147467	62147467	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	12	62147467	62147467	C	A	SNP	FAM19A2	ENST00000416284	human	ensembl	74_37	-1	known	missense	c.320	p.C107F	1.000	pfam_Chemokine-like_FAM19A2	pfam_Chemokine-like_FAM19A2	-	no_errors	FAM19A2	HGNC	ENSG00000198673	tier1	-	-	114	0	0.00	62	15	19.48
FASTKD5	0	genome.wustl.edu	37	20	3128560	3128560	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	20	3128560	3128560	G	A	SNP	FASTKD5	ENST00000380266	human	ensembl	74_37	-1	known	missense	c.1157	p.P386L	0.998	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD5	HGNC	ENSG00000215251				63	0	0.00	49	4	7.55
FCRL5	0	genome.wustl.edu	37	1	157514644	157514644	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	157514644	157514644	T	A	SNP	FCRL5	ENST00000356953	human	ensembl	74_37	-1	known	missense	c.536	p.N179I	0.655	smart_Ig_sub	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL5	HGNC	ENSG00000143297	tier1	-	-	164	0	0.00	127	14	9.93
FGF12	0	genome.wustl.edu	37	3	191888296	191888296	+	Silent	SNP	T	T	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	3	191888296	191888296	T	C	SNP	FGF12	ENST00000454309	human	ensembl	74_37	-1	known	silent	c.564	p.R188	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam,prints_Fibroblast_GF_fam	-	no_errors	FGF12	HGNC	ENSG00000114279	tier1	-	-	132	0	0.00	138	13	8.61
FKBP9	0	genome.wustl.edu	37	7	33020083	33020084	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	7	33020083	33020084	TG	-	DEL	FKBP9	ENST00000538336	human	ensembl	74_37	+1	known	frame_shift_del	c.970_971	p.C324fs	1.000:1.000	pfam_PPIase_FKBP_dom	pfam_PPIase_FKBP_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP9	HGNC	ENSG00000122642	tier1			167	0	0.00	115	15	11.54
GABRA1	0	genome.wustl.edu	37	5	161302600	161302600	+	Nonsense_Mutation	SNP	G	G	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	161302600	161302600	G	T	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	nonsense	c.511	p.E171*	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	tier1	-	-	159	0	0.00	108	7	6.09
GCM2	0	genome.wustl.edu	37	6	10881981	10881981	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	6	10881981	10881981	C	T	SNP	GCM2	ENST00000379491	human	ensembl	74_37	-1	known	missense	c.46	p.G16R	0.998	NULL	pfam_Tscrpt_reg_GCM_motif,superfamily_Tscrpt_reg_GCM_motif,pfscan_Tscrpt_reg_GCM_motif	-	no_errors	GCM2	HGNC	ENSG00000124827	tier1	-	-	42	0	0.00	36	7	16.28
GPR113	0	genome.wustl.edu	37	2	26536714	26536714	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	26536714	26536714	G	T	SNP	GPR113	ENST00000333478	human	ensembl	74_37	-1	known	missense	c.593	p.P198Q	0.986	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR113	HGNC	ENSG00000173567	tier1	-	-	52	0	0.00	32	8	20.00
GPR98	0	genome.wustl.edu	37	5	90086866	90086866	+	Silent	SNP	A	A	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	90086866	90086866	A	T	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	silent	c.14220	p.G4740	0.995	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				40	0	0.00	39	4	9.30
GREB1	0	genome.wustl.edu	37	2	11706633	11706633	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	11706633	11706633	G	A	SNP	GREB1	ENST00000234142	human	ensembl	74_37	+1	known	missense	c.305	p.R102H	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1	HGNC	ENSG00000196208				48	0	0.00	28	8	22.22
GTF2IRD2P1	0	genome.wustl.edu	37	7	72658326	72658326	+	RNA	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	7	72658326	72658326	C	T	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.695	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544	tier1	-	-	53	0	0.00	39	6	13.33
HAO2	0	genome.wustl.edu	37	1	119936417	119936417	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	119936417	119936417	C	T	SNP	HAO2	ENST00000361035	human	ensembl	74_37	+1	known	missense	c.1049	p.S350L	0.931	pfam_FMN-dep_DH,pirsf_Alpha-hydoxy_acid_DH_FMN	pfam_FMN-dep_DH,pfam_IMP_DH_GMPRt,pfam_Glu_synth_centr_C,pirsf_Alpha-hydoxy_acid_DH_FMN	-	no_errors	HAO2	HGNC	ENSG00000116882	tier1	-	-	192	0	0.00	166	15	8.29
ITFG1	0	genome.wustl.edu	37	16	47292606	47292606	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	16	47292606	47292606	C	T	SNP	ITFG1	ENST00000320640	human	ensembl	74_37	-1	known	missense	c.1267	p.D423N	1.000	NULL	NULL	-	no_errors	ITFG1	HGNC	ENSG00000129636	tier1	-	-	21	0	0.00	27	5	15.62
KATNA1	0	genome.wustl.edu	37	6	149924461	149924461	+	Silent	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	6	149924461	149924461	G	A	SNP	KATNA1	ENST00000335647	human	ensembl	74_37	-1	known	silent	c.672	p.A224	0.013	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	KATNA1	HGNC	ENSG00000186625	tier1	-	-	78	0	0.00	50	8	13.79
LINC00696	0	genome.wustl.edu	37	3	52097353	52097353	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	3	52097353	52097353	T	C	SNP	LINC00696	ENST00000541313	human	ensembl	74_37	-1	known	missense	c.215	p.Y72C	0.013	NULL	NULL	-	no_errors	LINC00696	HGNC	ENSG00000256097	tier1	-	-	107	0	0.00	59	18	23.38
LMO3	0	genome.wustl.edu	37	12	16713406	16713406	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	12	16713406	16713406	C	T	SNP	LMO3	ENST00000541295	human	ensembl	74_37	-1	known	missense	c.327	p.M109I	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LMO3	HGNC	ENSG00000048540	tier1	-	-	68	0	0.00	51	7	12.07
LRP12	0	genome.wustl.edu	37	8	105503447	105503447	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	8	105503447	105503447	T	G	SNP	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	missense	c.1977	p.K659N	1.000	NULL	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	35	0	0.00	33	12	26.67
MAMLD1	0	genome.wustl.edu	37	X	149639633	149639635	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	X	149639633	149639635	GCA	-	DEL	MAMLD1	ENST00000432680	human	ensembl	74_37	+1	known	in_frame_del	c.1713_1715	p.Q575in_frame_del	0.997:1.000:0.996	NULL	NULL	-	no_errors	MAMLD1	HGNC	ENSG00000013619	tier1			46	0	0.00	33	5	13.16
MAP2	0	genome.wustl.edu	37	2	210559207	210559207	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	210559207	210559207	A	C	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	missense	c.2313	p.K771N	0.098	pfam_MAP2_projctn	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018	tier1	-	-	68	0	0.00	50	5	9.09
MROH2B	0	genome.wustl.edu	37	5	41048497	41048497	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	41048497	41048497	G	T	SNP	MROH2B	ENST00000399564	human	ensembl	74_37	-1	known	missense	c.1613	p.P538H	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH2B	HGNC	ENSG00000171495	tier1	-	-	50	0	0.00	50	7	12.28
NAV3	0	genome.wustl.edu	37	12	78531043	78531043	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	12	78531043	78531043	G	C	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.4528	p.D1510H	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	tier1	-	-	63	0	0.00	60	7	10.45
NCKAP5	0	genome.wustl.edu	37	2	133540639	133540639	+	Nonsense_Mutation	SNP	T	T	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	133540639	133540639	T	A	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	nonsense	c.3745	p.R1249*	0.079	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	tier1	-	-	121	0	0.00	82	7	7.87
NELFCD	0	genome.wustl.edu	37	20	57568760	57568760	+	Nonsense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	20	57568760	57568760	C	T	SNP	NELFCD	ENST00000602795	human	ensembl	74_37	+1	known	nonsense	c.1576	p.R526*	1.000	pfam_TH1	pfam_TH1	-	no_errors	NELFCD	HGNC	ENSG00000101158	tier1	-	-	128	0	0.00	109	17	13.49
NIPBL	0	genome.wustl.edu	37	5	37000674	37000674	+	Splice_Site	SNP	T	T	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	37000674	37000674	T	C	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	splice_site	c.3502+2	e11+2	1.000	-	-	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1	-	-	70	0	0.00	40	29	42.03
NLRP5	0	genome.wustl.edu	37	19	56515244	56515244	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	19	56515244	56515244	A	C	SNP	NLRP5	ENST00000390649	human	ensembl	74_37	+1	known	missense	c.225	p.E75D	0.003	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP5	HGNC	ENSG00000171487	tier1	-	-	80	0	0.00	53	6	10.17
NUDT10	0	genome.wustl.edu	37	X	51075841	51075841	+	Silent	SNP	A	A	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	X	51075841	51075841	A	G	SNP	NUDT10	ENST00000356450	human	ensembl	74_37	+1	known	silent	c.24	p.T8	1.000	superfamily_NUDIX_hydrolase_dom-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT10	HGNC	ENSG00000122824	tier1	rs2625875	-	8	0	0.00	9	8	47.06
OR10J3	0	genome.wustl.edu	37	1	159284373	159284373	+	Missense_Mutation	SNP	A	A	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	159284373	159284373	A	G	SNP	OR10J3	ENST00000332217	human	ensembl	74_37	-1	known	missense	c.77	p.L26P	0.093	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10J3	HGNC	ENSG00000196266	tier1	-	-	160	0	0.00	106	20	15.87
OR13C8	0	genome.wustl.edu	37	9	107332409	107332409	+	Nonstop_Mutation	SNP	T	T	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	9	107332409	107332409	T	G	SNP	OR13C8	ENST00000335040	human	ensembl	74_37	+1	known	nonstop	c.961	p.*321G	0.004	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR13C8	HGNC	ENSG00000186943	tier1	-	-	42	0	0.00	31	11	26.19
OR5D16	0	genome.wustl.edu	37	11	55606937	55606937	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	11	55606937	55606937	G	A	SNP	OR5D16	ENST00000378396	human	ensembl	74_37	+1	known	missense	c.710	p.R237H	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D16	HGNC	ENSG00000205029	tier1	rs148616685	-	69	0	0.00	30	9	23.08
OSBP	0	genome.wustl.edu	37	11	59345691	59345691	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	11	59345691	59345691	C	T	SNP	OSBP	ENST00000263847	human	ensembl	74_37	-1	known	missense	c.1991	p.G664D	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBP	HGNC	ENSG00000110048	tier1	-	-	126	0	0.00	90	8	8.16
OVCH1	0	genome.wustl.edu	37	12	29648364	29648364	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	12	29648364	29648364	G	C	SNP	OVCH1	ENST00000318184	human	ensembl	74_37	-1	known	missense	c.308	p.T103S	0.161	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,smart_Peptidase_S1,smart_CUB_dom,pfscan_CUB_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	OVCH1	HGNC	ENSG00000187950	tier1	-	-	37	0	0.00	38	10	20.83
PAX5	0	genome.wustl.edu	37	9	37020768	37020768	+	Missense_Mutation	SNP	A	A	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	9	37020768	37020768	A	C	SNP	PAX5	ENST00000358127	human	ensembl	74_37	-1	known	missense	c.77	p.V26G	1.000	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	pfam_Paired_dom,pfam_Pax2_C,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX5	HGNC	ENSG00000196092	tier1	-	-	92	0	0.00	86	9	9.47
PCLO	0	genome.wustl.edu	37	7	82763850	82763850	+	Nonsense_Mutation	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	7	82763850	82763850	C	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	nonsense	c.3016	p.E1006*	1.000	superfamily_Znf_FYVE_PHD	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	39	0	0.00	32	13	28.89
PDCD11	0	genome.wustl.edu	37	10	105203066	105203066	+	Missense_Mutation	SNP	C	C	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	10	105203066	105203066	C	G	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.5100	p.I1700M	1.000	smart_HAT,pfscan_TPR-contain_dom	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843				44	0	0.00	29	3	9.09
PGAP1	0	genome.wustl.edu	37	2	197705990	197705990	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	197705990	197705990	G	C	SNP	PGAP1	ENST00000354764	human	ensembl	74_37	-1	known	missense	c.2737	p.L913V	1.000	NULL	pfam_PGAP1-like	-	no_errors	PGAP1	HGNC	ENSG00000197121	tier1	-	-	52	0	0.00	51	9	15.00
PRR16	0	genome.wustl.edu	37	5	120021909	120021909	+	Silent	SNP	G	G	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	120021909	120021909	G	T	SNP	PRR16	ENST00000407149	human	ensembl	74_37	+1	known	silent	c.420	p.V140	0.000	NULL	NULL	-	no_errors	PRR16	HGNC	ENSG00000184838	tier1	-	-	72	0	0.00	30	5	14.29
RAB11FIP5	0	genome.wustl.edu	37	2	73315487	73315487	+	Missense_Mutation	SNP	G	G	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	73315487	73315487	G	C	SNP	RAB11FIP5	ENST00000258098	human	ensembl	74_37	-1	known	missense	c.1259	p.P420R	0.349	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP5	HGNC	ENSG00000135631	tier1	-	-	72	0	0.00	50	7	12.28
RB1CC1	0	genome.wustl.edu	37	8	53570276	53570276	+	Missense_Mutation	SNP	T	T	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	8	53570276	53570276	T	C	SNP	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	missense	c.2113	p.I705V	1.000	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287	tier1	-	-	66	0	0.00	54	6	10.00
RGAG1	0	genome.wustl.edu	37	X	109696365	109696365	+	Silent	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	X	109696365	109696365	C	A	SNP	RGAG1	ENST00000465301	human	ensembl	74_37	+1	known	silent	c.2520	p.P840	0.002	NULL	NULL	-	no_errors	RGAG1	HGNC	ENSG00000243978	tier1	-	-	82	0	0.00	54	32	37.21
ROS1	0	genome.wustl.edu	37	6	117683833	117683833	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	6	117683833	117683833	T	A	SNP	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	missense	c.3314	p.N1105I	0.239	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936				57	0	0.00	53	4	7.02
RPS12	0	genome.wustl.edu	37	6	133138134	133138134	+	Silent	SNP	C	C	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	6	133138134	133138134	C	G	SNP	RPS12	ENST00000230050	human	ensembl	74_37	+1	known	silent	c.270	p.G90	0.998	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45,prints_Ribosomal_S12e	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45,prints_Ribosomal_S12e	-	no_errors	RPS12	HGNC	ENSG00000112306	tier1	rs146638149	-	75	0	0.00	32	6	15.79
RPS12	0	genome.wustl.edu	37	6	133138137	133138137	+	Silent	SNP	T	T	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	6	133138137	133138137	T	C	SNP	RPS12	ENST00000230050	human	ensembl	74_37	+1	known	silent	c.273	p.L91	1.000	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45,prints_Ribosomal_S12e	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45,prints_Ribosomal_S12e	-	no_errors	RPS12	HGNC	ENSG00000112306	tier1	rs141181702	-	74	0	0.00	33	6	15.38
RPS12	0	genome.wustl.edu	37	6	133138146	133138146	+	Silent	SNP	T	T	C			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	6	133138146	133138146	T	C	SNP	RPS12	ENST00000230050	human	ensembl	74_37	+1	known	silent	c.282	p.I94	1.000	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45,prints_Ribosomal_S12e	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45,prints_Ribosomal_S12e	-	no_errors	RPS12	HGNC	ENSG00000112306	tier1	-	-	73	0	0.00	36	6	14.29
RPS9	0	genome.wustl.edu	37	19	54710193	54710193	+	Silent	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	19	54710193	54710193	C	T	SNP	RPS9	ENST00000302907	human	ensembl	74_37	+1	known	silent	c.270	p.G90	1.000	pfam_Ribosomal_S4/S9_N,tigrfam_Ribosomal_S4/S9_euk/arc	pfam_Ribosomal_S4/S9_N,pfam_S4_RNA-bd,smart_S4_RNA-bd,pfscan_S4_RNA-bd,tigrfam_Ribosomal_S4/S9_euk/arc	-	no_errors	RPS9	HGNC	ENSG00000170889	tier1	-	-	41	0	0.00	34	4	10.53
RYR2	0	genome.wustl.edu	37	1	237729890	237729890	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	237729890	237729890	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.3232	p.G1078S	0.969	pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				37	0	0.00	27	4	12.90
SAP30BP	0	genome.wustl.edu	37	17	73702444	73702446	+	In_Frame_Del	DEL	GGG	GGG	-			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	GGG	GGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	17	73702444	73702446	GGG	-	DEL	SAP30BP	ENST00000584667	human	ensembl	74_37	+1	known	in_frame_del	c.770_772	p.WD257in_frame_delY	1.000:1.000:1.000	NULL	pfam_SAP30BP	-	no_errors	SAP30BP	HGNC	ENSG00000161526	tier1			138	0	0.00	53	10	15.87
SCARNA5	0	genome.wustl.edu	37	2	234184414	234184414	+	RNA	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	234184414	234184414	C	T	SNP	SCARNA5	ENST00000516201	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SCARNA5	HGNC	ENSG00000252010	tier1	-	-	195	0	0.00	136	17	11.11
SH3TC2	0	genome.wustl.edu	37	5	148392216	148392216	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	148392216	148392216	C	A	SNP	SH3TC2	ENST00000515425	human	ensembl	74_37	-1	known	missense	c.3135	p.E1045D	1.000	smart_TPR_repeat	pfam_SH3_domain,pfam_TPR_1,superfamily_SH3_domain,smart_SH3_domain,smart_TPR_repeat,pfscan_SH3_domain	-	no_errors	SH3TC2	HGNC	ENSG00000169247	tier1	-	-	30	0	0.00	32	5	13.51
SI	0	genome.wustl.edu	37	3	164735436	164735436	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	3	164735436	164735436	G	A	SNP	SI	ENST00000264382	human	ensembl	74_37	-1	known	missense	c.3659	p.A1220V	0.999	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402	tier1	-	-	56	0	0.00	36	10	21.74
SLC12A3	0	genome.wustl.edu	37	16	56918074	56918074	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	16	56918074	56918074	G	A	SNP	SLC12A3	ENST00000438926	human	ensembl	74_37	+1	known	missense	c.1783	p.V595M	0.788	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_NaCl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A3	HGNC	ENSG00000070915	tier1	rs201432183	-	54	0	0.00	27	5	15.62
SLC12A7	0	genome.wustl.edu	37	5	1083880	1083880	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	1083880	1083880	G	A	SNP	SLC12A7	ENST00000264930	human	ensembl	74_37	-1	known	missense	c.1109	p.A370V	0.822	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A7	HGNC	ENSG00000113504	tier1	-	-	34	0	0.00	39	6	13.33
SLC2A9	0	genome.wustl.edu	37	4	9909897	9909897	+	Missense_Mutation	SNP	T	T	G			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	4	9909897	9909897	T	G	SNP	SLC2A9	ENST00000264784	human	ensembl	74_37	-1	known	missense	c.1075	p.S359R	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A9	HGNC	ENSG00000109667	tier1	-	-	68	0	0.00	62	5	7.46
SMARCE1	0	genome.wustl.edu	37	17	38788581	38788581	+	Missense_Mutation	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	17	38788581	38788581	C	T	SNP	SMARCE1	ENST00000348513	human	ensembl	74_37	-1	known	missense	c.580	p.A194T	0.997	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SMARCE1	HGNC	ENSG00000073584				69	0	0.00	41	4	8.89
SNX18	0	genome.wustl.edu	37	5	53815310	53815310	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	53815310	53815310	C	A	SNP	SNX18	ENST00000326277	human	ensembl	74_37	+1	known	missense	c.1528	p.Q510K	1.000	pfam_Sorting_nexin_WASP-bd-dom,pirsf_Snx9	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX18	HGNC	ENSG00000178996	tier1	-	-	60	0	0.00	53	8	13.11
STXBP5	0	genome.wustl.edu	37	6	147636830	147636830	+	Missense_Mutation	SNP	T	T	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	6	147636830	147636830	T	A	SNP	STXBP5	ENST00000321680	human	ensembl	74_37	+1	known	missense	c.1582	p.Y528N	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C_dom,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5	HGNC	ENSG00000164506	tier1	-	-	94	0	0.00	77	16	17.20
TACC2	0	genome.wustl.edu	37	10	123844802	123844803	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	10	123844802	123844803	AG	-	DEL	TACC2	ENST00000334433	human	ensembl	74_37	+1	known	frame_shift_del	c.2787_2788	p.E930fs	0.000:0.000	NULL	pfam_TACC	-	no_errors	TACC2	HGNC	ENSG00000138162	tier1			85	0	0.00	41	10	19.61
TAS1R2	0	genome.wustl.edu	37	1	19166576	19166576	+	Silent	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	19166576	19166576	G	A	SNP	TAS1R2	ENST00000375371	human	ensembl	74_37	-1	novel	silent	c.2037	p.Y679	0.090	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	TAS1R2	HGNC	ENSG00000179002	tier1	-	-	140	0	0.00	100	8	7.41
TENM2	0	genome.wustl.edu	37	5	167420138	167420138	+	Silent	SNP	C	C	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	167420138	167420138	C	T	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	silent	c.1137	p.S379	0.008	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	54	0	0.00	60	5	7.69
TPX2	0	genome.wustl.edu	37	20	30381793	30381795	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	20	30381793	30381795	AGG	-	DEL	TPX2	ENST00000340513	human	ensembl	74_37	+1	known	in_frame_del	c.1760_1762	p.E588in_frame_del	1.000:1.000:1.000	NULL	pfam_TPX2_central_dom,pfam_Aurora-A-bd,pfam_TPX2_dom_C	-	no_errors	TPX2	HGNC	ENSG00000088325	tier1			62	0	0.00	38	11	22.45
TRAF3IP3	0	genome.wustl.edu	37	1	209948708	209948708	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	1	209948708	209948708	G	T	SNP	TRAF3IP3	ENST00000367024	human	ensembl	74_37	+1	known	missense	c.789	p.W263C	0.999	NULL	NULL	-	no_errors	TRAF3IP3	HGNC	ENSG00000009790	tier1	-	-	13	0	0.00	10	4	28.57
TSSK1B	0	genome.wustl.edu	37	5	112770403	112770403	+	Missense_Mutation	SNP	C	C	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	5	112770403	112770403	C	A	SNP	TSSK1B	ENST00000390666	human	ensembl	74_37	-1	known	missense	c.134	p.R45L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TSSK1B	HGNC	ENSG00000212122	tier1	-	-	56	0	0.00	30	7	18.92
UBTD1	0	genome.wustl.edu	37	10	99330169	99330169	+	Missense_Mutation	SNP	G	G	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	10	99330169	99330169	G	T	SNP	UBTD1	ENST00000370664	human	ensembl	74_37	+1	known	missense	c.573	p.W191C	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBTD1	HGNC	ENSG00000165886	tier1	-	-	25	0	0.00	18	4	18.18
VWA3B	0	genome.wustl.edu	37	2	98797598	98797598	+	Missense_Mutation	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	2	98797598	98797598	G	A	SNP	VWA3B	ENST00000477737	human	ensembl	74_37	+1	known	missense	c.1234	p.D412N	1.000	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3B	HGNC	ENSG00000168658	tier1	-	-	99	0	0.00	59	6	9.23
WDR72	0	genome.wustl.edu	37	15	53809859	53809859	+	RNA	SNP	A	A	T			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	15	53809859	53809859	A	T	SNP	WDR72	ENST00000567224	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WDR72	HGNC	ENSG00000166415	tier1	-	-	53	0	0.00	28	13	31.71
XIST	0	genome.wustl.edu	37	X	73062518	73062518	+	RNA	SNP	G	G	A			TCGA-FP-A8CX-01A-11D-A364-08	TCGA-FP-A8CX-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ab3c2441-acc1-4eb1-8108-ea8739fa6f10	b5d313b7-5b47-4093-a940-e6079e45a9c6	X	73062518	73062518	G	A	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1	-	-	27	0	0.00	15	7	31.82
