Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
CELSR2	0	genome.wustl.edu	37	1	109811770	109811770	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	109811770	109811770	G	A	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	missense	c.6670	p.A2224T	0.072	pfam_DUF3497	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126				51	0	0	28	13	31.7073
KCNA10	0	genome.wustl.edu	37	1	111059876	111059876	+	Nonstop_Mutation	SNP	A	A	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	111059876	111059876	A	C	SNP	KCNA10	ENST00000369771	human	ensembl	74_37	-1	known	nonstop	c.1534	p.*512G	1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA10	HGNC	ENSG00000143105				49	0	0	33	9	21.4286
ENSG00000203849	0	genome.wustl.edu	37	1	142713407	142713407	+	RNA	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	142713407	142713407	C	T	SNP	ENSG00000203849	ENST00000369381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.042	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849				41	0	0	28	8	22.2222
SPTA1	0	genome.wustl.edu	37	1	158618325	158618325	+	Silent	SNP	T	T	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	158618325	158618325	T	G	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	silent	c.3688	p.R1230	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				101	0	0	26	33	55.9322
CROCCP2	0	genome.wustl.edu	37	1	16953705	16953705	+	RNA	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	16953705	16953705	G	A	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.142	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908				165	0	0	57	8	12.3077
TNR	0	genome.wustl.edu	37	1	175324651	175324651	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	175324651	175324651	G	C	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	missense	c.3237	p.D1079E	0.997	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147				77	0	0	19	33	63.4615
MIR181B1	0	genome.wustl.edu	37	1	198828005	198828005	+	RNA	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	198828005	198828005	C	T	SNP	MIR181B1	ENST00000385240	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.951	-	-	-	no_errors	MIR181B1	HGNC	ENSG00000207975				54	0	0	34	22	39.2857
NFASC	0	genome.wustl.edu	37	1	204923461	204923461	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	204923461	204923461	C	T	SNP	NFASC	ENST00000367172	human	ensembl	74_37	+1	known	missense	c.361	p.R121C	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NFASC	HGNC	ENSG00000163531				44	0	0	22	8	26.6667
HSPG2	0	genome.wustl.edu	37	1	22199882	22199882	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	22199882	22199882	C	G	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.3779	p.G1260A	1.000	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				225	1	0.442478	95	42	30.6569
HEATR1	0	genome.wustl.edu	37	1	236730052	236730052	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	236730052	236730052	T	G	SNP	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	missense	c.4202	p.Q1401P	1.000	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285				49	0	0	19	11	36.6667
NLRP3	0	genome.wustl.edu	37	1	247588491	247588491	+	Silent	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	247588491	247588491	C	T	SNP	NLRP3	ENST00000336119	human	ensembl	74_37	+1	known	silent	c.1746	p.G582	0.998	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711				60	0	0	38	3	7.31707
CAP1	0	genome.wustl.edu	37	1	40535490	40535490	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	40535490	40535490	C	G	SNP	CAP1	ENST00000372792	human	ensembl	74_37	+1	known	missense	c.937	p.R313G	0.996	NULL	pfam_Adenylate_cyclase-assoc_CAP_N,pfam_Adenylate_cyclase-assoc_CAP_C,superfamily_Adenylate_cyclase-assoc_CAP_N,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif	-	no_errors	CAP1	HGNC	ENSG00000131236				120	1	0.826446	48	26	35.1351
ELTD1	0	genome.wustl.edu	37	1	79404922	79404922	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	79404922	79404922	T	A	SNP	ELTD1	ENST00000370742	human	ensembl	74_37	-1	known	missense	c.347	p.H116L	0.952	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_GPS_dom,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	ELTD1	HGNC	ENSG00000162618				23	0	0	17	9	34.6154
ABCC2	0	genome.wustl.edu	37	10	101578969	101578969	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	10	101578969	101578969	T	A	SNP	ABCC2	ENST00000370449	human	ensembl	74_37	+1	known	missense	c.2563	p.F855I	1.000	pfscan_ABC_transporter-like,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC2	HGNC	ENSG00000023839				91	0	0	67	17	20.2381
SORCS3	0	genome.wustl.edu	37	10	107007060	107007060	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	10	107007060	107007060	G	T	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	missense	c.3076	p.G1026C	1.000	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395				39	0	0	19	10	34.4828
TTC40	0	genome.wustl.edu	37	10	134622103	134622103	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	10	134622103	134622103	C	T	SNP	TTC40	ENST00000263170	human	ensembl	74_37	-1	known	missense	c.2453	p.R818H	0.000	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811				49	0	0	16	18	52.9412
MYO3A	0	genome.wustl.edu	37	10	26385407	26385407	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	10	26385407	26385407	A	T	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.1660	p.R554W	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777				49	0	0	30	21	41.1765
DLG5	0	genome.wustl.edu	37	10	79579661	79579661	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	10	79579661	79579661	G	A	SNP	DLG5	ENST00000372391	human	ensembl	74_37	-1	known	missense	c.3518	p.P1173L	0.396	NULL	pfam_PDZ,pfam_DUF622,pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_SH3_domain,superfamily_DEATH-like_dom,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_CARD,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG5	HGNC	ENSG00000151208				202	0	0	64	59	47.9675
CNTN5	0	genome.wustl.edu	37	11	100170065	100170065	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	11	100170065	100170065	G	A	SNP	CNTN5	ENST00000279463	human	ensembl	74_37	+1	known	missense	c.2557	p.V853I	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN5	HGNC	ENSG00000149972				69	0	0	44	9	16.9811
CCDC15	0	genome.wustl.edu	37	11	124829033	124829033	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	11	124829033	124829033	A	T	SNP	CCDC15	ENST00000344762	human	ensembl	74_37	+1	known	missense	c.200	p.E67V	1.000	NULL	NULL	-	no_errors	CCDC15	HGNC	ENSG00000149548				18	0	0	8	3	27.2727
OR52A5	0	genome.wustl.edu	37	11	5153403	5153403	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	11	5153403	5153403	A	G	SNP	OR52A5	ENST00000307388	human	ensembl	74_37	-1	known	missense	c.470	p.L157P	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52A5	HGNC	ENSG00000171944				96	0	0	53	15	22.0588
C11orf82	0	genome.wustl.edu	37	11	82644674	82644674	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	11	82644674	82644674	G	C	SNP	C11orf82	ENST00000430323	human	ensembl	74_37	+1	known	missense	c.2294	p.S765T	0.244	NULL	pfam_Rep_factor-A_C,superfamily_NA-bd_OB-fold	-	no_errors	C11orf82	HGNC	ENSG00000165490				47	0	0	40	22	35.4839
CACNA1C	0	genome.wustl.edu	37	12	2676928	2676928	+	Silent	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	12	2676928	2676928	C	T	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	silent	c.1863	p.C621	0.955	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067				35	0	0	6	3	33.3333
FGF6	0	genome.wustl.edu	37	12	4554596	4554596	+	Silent	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	12	4554596	4554596	C	T	SNP	FGF6	ENST00000228837	human	ensembl	74_37	-1	known	silent	c.141	p.T47	0.998	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF6	HGNC	ENSG00000111241				138	0	0	42	17	28.8136
KRT75	0	genome.wustl.edu	37	12	52822136	52822136	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	12	52822136	52822136	C	G	SNP	KRT75	ENST00000252245	human	ensembl	74_37	-1	known	missense	c.1286	p.R429P	0.997	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT75	HGNC	ENSG00000170454				145	0	0	12	27	69.2308
KRT6B	0	genome.wustl.edu	37	12	52841341	52841341	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	12	52841341	52841341	C	A	SNP	KRT6B	ENST00000252252	human	ensembl	74_37	-1	known	missense	c.1441	p.V481F	0.971	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6B	HGNC	ENSG00000185479				91	0	0	20	19	48.7179
STAT6	0	genome.wustl.edu	37	12	57500552	57500552	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	12	57500552	57500552	C	A	SNP	STAT6	ENST00000300134	human	ensembl	74_37	-1	known	missense	c.402	p.L134F	0.004	pfam_STAT_TF_alpha,superfamily_STAT_TF_coiled-coil	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT6	HGNC	ENSG00000166888				139	0	0	77	24	23.7624
TMCO3	0	genome.wustl.edu	37	13	114202736	114202736	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	13	114202736	114202736	G	A	SNP	TMCO3	ENST00000434316	human	ensembl	74_37	+1	known	missense	c.1889	p.R630Q	1.000	pfam_Cation/H_exchanger	pfam_Cation/H_exchanger	-	no_errors	TMCO3	HGNC	ENSG00000150403				98	0	0	80	10	11.1111
NBEA	0	genome.wustl.edu	37	13	36223810	36223810	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	13	36223810	36223810	C	A	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.7726	p.P2576T	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				152	0	0	155	34	17.9894
CCNA1	0	genome.wustl.edu	37	13	37014260	37014260	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	13	37014260	37014260	G	A	SNP	CCNA1	ENST00000255465	human	ensembl	74_37	+1	known	silent	c.1038	p.Q346	1.000	pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNA1	HGNC	ENSG00000133101				137	0	0	68	82	54.6667
SPERT	0	genome.wustl.edu	37	13	46287489	46287489	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	13	46287489	46287489	C	A	SNP	SPERT	ENST00000310521	human	ensembl	74_37	+1	known	missense	c.329	p.A110D	0.976	NULL	NULL	-	no_errors	SPERT	HGNC	ENSG00000174015				152	0	0	100	26	20.6349
LRRC16B	0	genome.wustl.edu	37	14	24538363	24538363	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	14	24538363	24538363	C	T	SNP	LRRC16B	ENST00000342740	human	ensembl	74_37	+1	known	missense	c.4000	p.R1334W	0.952	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648				51	0	0	27	9	25
MEF2A	0	genome.wustl.edu	37	15	100214776	100214776	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	15	100214776	100214776	C	T	SNP	MEF2A	ENST00000338042	human	ensembl	74_37	+1	known	missense	c.569	p.S190F	1.000	NULL	pfam_TF_MADSbox,pfam_HJURP_C,superfamily_TF_MADSbox,smart_TF_MADSbox,pfscan_TF_MADSbox,prints_TF_MADSbox	-	no_errors	MEF2A	HGNC	ENSG00000068305				156	0	0	71	25	26.0417
GABRB3	0	genome.wustl.edu	37	15	27018863	27018863	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	15	27018863	27018863	G	A	SNP	GABRB3	ENST00000299267	human	ensembl	74_37	-1	known	silent	c.9	p.S3	0.298	NULL	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB3	HGNC	ENSG00000166206				9	0	0	0	4	100
RYR3	0	genome.wustl.edu	37	15	34102755	34102755	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	15	34102755	34102755	G	A	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.10102	p.V3368M	1.000	superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				53	0	0	15	26	63.4146
AVEN	0	genome.wustl.edu	37	15	34158855	34158855	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	15	34158855	34158855	C	T	SNP	AVEN	ENST00000306730	human	ensembl	74_37	-1	known	missense	c.1048	p.E350K	0.998	NULL	NULL	-	no_errors	AVEN	HGNC	ENSG00000169857				69	0	0	47	22	31.8841
DUOX1	0	genome.wustl.edu	37	15	45442866	45442866	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	15	45442866	45442866	G	A	SNP	DUOX1	ENST00000321429	human	ensembl	74_37	+1	known	missense	c.2855	p.R952Q	0.994	NULL	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX1	HGNC	ENSG00000137857				73	0	0	16	22	57.8947
SEMA6D	0	genome.wustl.edu	37	15	48063347	48063347	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	15	48063347	48063347	T	C	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	missense	c.2587	p.S863P	0.947	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872				101	0	0	39	51	56.6667
SOX8	0	genome.wustl.edu	37	16	1035103	1035103	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	16	1035103	1035103	G	A	SNP	SOX8	ENST00000293894	human	ensembl	74_37	+1	known	missense	c.1058	p.R353Q	0.041	NULL	pfam_HMG_box_dom,pfam_Sox_N,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX8	HGNC	ENSG00000005513				26	0	0	6	7	53.8462
NLRC3	0	genome.wustl.edu	37	16	3614583	3614583	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	16	3614583	3614583	C	A	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.496	p.A166S	0.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984				68	0	0	27	13	32.5
CNGB1	0	genome.wustl.edu	37	16	58001053	58001053	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	16	58001053	58001053	G	A	SNP	CNGB1	ENST00000251102	human	ensembl	74_37	-1	known	silent	c.138	p.A46	0.000	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB1	HGNC	ENSG00000070729				102	0	0	23	16	41.0256
C16orf11	0	genome.wustl.edu	37	16	613320	613320	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	16	613320	613320	G	A	SNP	C16orf11	ENST00000409413	human	ensembl	74_37	+1	known	missense	c.26	p.R9H	0.635	NULL	NULL	-	no_errors	C16orf11	HGNC	ENSG00000161992				66	0	0	12	10	45.4545
TOP2A	0	genome.wustl.edu	37	17	38548548	38548548	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	17	38548548	38548548	G	A	SNP	TOP2A	ENST00000423485	human	ensembl	74_37	-1	known	missense	c.4010	p.S1337L	0.999	NULL	pfam_Topo_IIA_A/C,pfam_Topo_IIA_bsu_dom2,pfam_DTHCT,pfam_HATPase_ATP-bd,superfamily_Topo_IIA_like_dom,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_Topo_IIA,smart_Topo_IIA_A/C,prints_TopoII_euk,prints_Topo_IIA,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	TOP2A	HGNC	ENSG00000131747				21	0	0	144	86	37.3913
SPATA20	0	genome.wustl.edu	37	17	48628511	48628511	+	Silent	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	17	48628511	48628511	C	A	SNP	SPATA20	ENST00000006658	human	ensembl	74_37	+1	known	silent	c.1536	p.P512	0.001	superfamily_6-hairpin_glycosidase-like	pfam_DUF255,pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like,superfamily_Thioredoxin-like_fold	-	no_errors	SPATA20	HGNC	ENSG00000006282				49	0	0	15	4	21.0526
GIPC1	0	genome.wustl.edu	37	19	14591487	14591487	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	19	14591487	14591487	C	T	SNP	GIPC1	ENST00000345425	human	ensembl	74_37	-1	known	missense	c.392	p.R131H	1.000	superfamily_PDZ,pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC1	HGNC	ENSG00000123159				167	0	0	49	22	30.9859
NWD1	0	genome.wustl.edu	37	19	16860087	16860087	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	19	16860087	16860087	G	C	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	missense	c.634	p.A212P	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039				123	1	0.806452	35	26	42.623
ENSG00000269481	0	genome.wustl.edu	37	19	17533126	17533126	+	RNA	SNP	A	A	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	19	17533126	17533126	A	G	SNP	ENSG00000269481	ENST00000593957	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2521M24.6	Clone_based_vega_gene	ENSG00000269481				120	0	0	40	4	9.09091
ZNF492	0	genome.wustl.edu	37	19	22846623	22846623	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	19	22846623	22846623	G	A	SNP	ZNF492	ENST00000456783	human	ensembl	74_37	+1	known	missense	c.152	p.R51Q	0.052	NULL	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF492	HGNC	ENSG00000229676				17	0	0	5	4	44.4444
ZNF567	0	genome.wustl.edu	37	19	37211224	37211224	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	19	37211224	37211224	A	C	SNP	ZNF567	ENST00000536254	human	ensembl	74_37	+1	known	missense	c.1598	p.Y533S	0.335	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF567	HGNC	ENSG00000189042				68	0	0	42	12	22.2222
PPP6R1	0	genome.wustl.edu	37	19	55756982	55756982	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	19	55756982	55756982	C	T	SNP	PPP6R1	ENST00000412770	human	ensembl	74_37	-1	known	missense	c.292	p.A98T	0.454	NULL	pfam_SAPS,superfamily_ARM-type_fold	-	no_errors	PPP6R1	HGNC	ENSG00000105063				42	0	0	14	2	12.5
MUC16	0	genome.wustl.edu	37	19	9086755	9086755	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	19	9086755	9086755	C	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.5060	p.S1687I	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				113	0	0	62	30	32.6087
NPHP1	0	genome.wustl.edu	37	2	110881384	110881384	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	110881384	110881384	C	T	SNP	NPHP1	ENST00000316534	human	ensembl	74_37	-1	known	missense	c.2186	p.R729K	0.209	NULL	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NPHP1	HGNC	ENSG00000144061				68	0	0	26	26	50
STEAP3	0	genome.wustl.edu	37	2	120005751	120005751	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	120005751	120005751	G	A	SNP	STEAP3	ENST00000393110	human	ensembl	74_37	+1	known	missense	c.1019	p.R340H	1.000	pfam_Fe3_Rdtase_TM_dom	pfam_Fe3_Rdtase_TM_dom	-	no_errors	STEAP3	HGNC	ENSG00000115107				79	0	0	55	3	5.17241
DDX1	0	genome.wustl.edu	37	2	15742674	15742674	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	15742674	15742674	A	G	SNP	DDX1	ENST00000233084	human	ensembl	74_37	+1	known	missense	c.310	p.I104V	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_ConA-like_lec_gl_sf,smart_Helicase_ATP-bd,pfscan_B30.2/SPRY	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_SPRY_rcpt,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_ConA-like_lec_gl_sf,smart_Helicase_ATP-bd,smart_SPla/RYanodine_receptor_subgr,smart_Helicase_C,pfscan_B30.2/SPRY,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX1	HGNC	ENSG00000079785				44	0	0	29	22	43.1373
SCN9A	0	genome.wustl.edu	37	2	167055493	167055493	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	167055493	167055493	G	A	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	missense	c.5659	p.R1887W	1.000	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432				123	0	0	74	57	43.5115
TLK1	0	genome.wustl.edu	37	2	171854267	171854267	+	Silent	SNP	T	T	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	171854267	171854267	T	C	SNP	TLK1	ENST00000431350	human	ensembl	74_37	-1	known	silent	c.1971	p.V657	0.974	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TLK1	HGNC	ENSG00000198586				220	0	0	109	103	48.5849
WIPF1	0	genome.wustl.edu	37	2	175432646	175432646	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	175432646	175432646	G	A	SNP	WIPF1	ENST00000272746	human	ensembl	74_37	-1	known	missense	c.1285	p.P429S	1.000	NULL	smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WIPF1	HGNC	ENSG00000115935				85	0	0	71	18	20.2247
HOXD9	0	genome.wustl.edu	37	2	176987764	176987764	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	176987764	176987764	G	T	SNP	HOXD9	ENST00000249499	human	ensembl	74_37	+1	known	missense	c.268	p.A90S	1.000	pfam_Hox9_activation_N,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXD9	HGNC	ENSG00000128709				23	0	0	5	7	58.3333
TTC30B	0	genome.wustl.edu	37	2	178417162	178417162	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	178417162	178417162	G	A	SNP	TTC30B	ENST00000408939	human	ensembl	74_37	-1	known	silent	c.330	p.A110	1.000	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC30B	HGNC	ENSG00000196659				164	0	0	96	17	15.0442
TTN	0	genome.wustl.edu	37	2	179393870	179393870	+	Silent	SNP	G	G	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	179393870	179393870	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.98904	p.V32968	0.970	superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				14	0	0	20	19	48.7179
CRIM1	0	genome.wustl.edu	37	2	36749368	36749368	+	Silent	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	36749368	36749368	C	T	SNP	CRIM1	ENST00000280527	human	ensembl	74_37	+1	known	silent	c.2340	p.S780	0.049	pfam_VWF_C,smart_VWF_C,pfscan_VWF_C	pfam_VWF_C,pfam_Antistasin-like,superfamily_Hirudin/antistatin,smart_IGFBP-like,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	-	no_errors	CRIM1	HGNC	ENSG00000150938				123	0	0	55	51	48.1132
MBOAT2	0	genome.wustl.edu	37	2	9008633	9008633	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	9008633	9008633	G	A	SNP	MBOAT2	ENST00000305997	human	ensembl	74_37	-1	known	silent	c.930	p.D310	1.000	pfam_MBOAT_fam	pfam_MBOAT_fam,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MBOAT2	HGNC	ENSG00000143797				100	1	0.990099	86	14	14
VWA3B	0	genome.wustl.edu	37	2	98804462	98804462	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	2	98804462	98804462	G	A	SNP	VWA3B	ENST00000477737	human	ensembl	74_37	+1	known	missense	c.1336	p.A446T	1.000	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3B	HGNC	ENSG00000168658				56	0	0	41	8	16.3265
SCP2D1	0	genome.wustl.edu	37	20	18794852	18794852	+	Silent	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	20	18794852	18794852	C	T	SNP	SCP2D1	ENST00000377428	human	ensembl	74_37	+1	known	silent	c.393	p.A131	0.279	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	-	no_errors	SCP2D1	HGNC	ENSG00000132631				59	0	0	60	14	18.9189
TGM6	0	genome.wustl.edu	37	20	2381041	2381041	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	20	2381041	2381041	G	A	SNP	TGM6	ENST00000202625	human	ensembl	74_37	+1	known	missense	c.940	p.V314M	0.926	pfam_Transglutaminase-like,smart_Transglutaminase-like	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM6	HGNC	ENSG00000166948				139	0	0	61	31	33.6957
ENSG00000269846	0	genome.wustl.edu	37	20	35724349	35724349	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	20	35724349	35724349	G	T	SNP	ENSG00000269846	ENST00000598590	human	ensembl	74_37	+1	known	missense	c.161	p.G54V	0.470	NULL	NULL	-	no_errors	RBL1	Uniprot_gn	ENSG00000269846				16	0	0	14	5	26.3158
PTPRT	0	genome.wustl.edu	37	20	40733227	40733227	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	20	40733227	40733227	T	G	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.3579	p.Q1193H	0.995	smart_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				111	0	0	98	17	14.7826
ARFGEF2	0	genome.wustl.edu	37	20	47605094	47605094	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	20	47605094	47605094	C	A	SNP	ARFGEF2	ENST00000371917	human	ensembl	74_37	+1	known	missense	c.2428	p.L810M	1.000	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF2	HGNC	ENSG00000124198				99	0	0	75	25	25
TPTEP1	0	genome.wustl.edu	37	22	17119473	17119473	+	RNA	SNP	T	T	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	22	17119473	17119473	T	C	SNP	TPTEP1	ENST00000383140	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	TPTEP1	HGNC	ENSG00000100181				37	0	0	19	10	34.4828
BMS1P20	0	genome.wustl.edu	37	22	22664141	22664141	+	RNA	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	22	22664141	22664141	G	A	SNP	BMS1P20	ENST00000426066	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BMS1P20	HGNC	ENSG00000236850				89	0	0	50	5	9.09091
SEZ6L	0	genome.wustl.edu	37	22	26709789	26709789	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	22	26709789	26709789	G	A	SNP	SEZ6L	ENST00000248933	human	ensembl	74_37	+1	known	missense	c.1936	p.E646K	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L	HGNC	ENSG00000100095				107	0	0	75	31	29.2453
NEFH	0	genome.wustl.edu	37	22	29885490	29885490	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	22	29885490	29885490	C	A	SNP	NEFH	ENST00000310624	human	ensembl	74_37	+1	known	missense	c.1861	p.P621T	0.025	NULL	pfam_IF,pfam_DUF1388	-	no_errors	NEFH	HGNC	ENSG00000100285				136	1	0.729927	24	44	64.7059
GTSE1	0	genome.wustl.edu	37	22	46724658	46724658	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	22	46724658	46724658	C	T	SNP	GTSE1	ENST00000454366	human	ensembl	74_37	+1	known	missense	c.1798	p.P600S	0.343	NULL	NULL	-	no_errors	GTSE1	HGNC	ENSG00000075218				136	0	0	68	30	30.6122
SEMA5B	0	genome.wustl.edu	37	3	122630821	122630821	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	3	122630821	122630821	C	T	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.3154	p.A1052T	0.002	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684				35	0	0	11	13	54.1667
NMD3	0	genome.wustl.edu	37	3	160945113	160945113	+	Silent	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	3	160945113	160945113	C	A	SNP	NMD3	ENST00000351193	human	ensembl	74_37	+1	known	silent	c.258	p.I86	1.000	pfam_NMD3	pfam_NMD3	-	no_errors	NMD3	HGNC	ENSG00000169251				24	0	0	49	4	7.54717
GLB1	0	genome.wustl.edu	37	3	33055719	33055719	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	3	33055719	33055719	G	A	SNP	GLB1	ENST00000445488	human	ensembl	74_37	-1	known	silent	c.1707	p.C569	0.000	superfamily_Galactose-bd-like	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,prints_Glycoside_Hdrlase_35	-	no_errors	GLB1	HGNC	ENSG00000170266				58	0	0	8	31	79.4872
CTNNB1	0	genome.wustl.edu	37	3	41266103	41266103	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	3	41266103	41266103	G	A	SNP	CTNNB1	ENST00000349496	human	ensembl	74_37	+1	known	missense	c.100	p.G34R	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	-	no_errors	CTNNB1	HGNC	ENSG00000168036				46	0	0	4	14	77.7778
FAM212A	0	genome.wustl.edu	37	3	49842272	49842272	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	3	49842272	49842272	G	A	SNP	FAM212A	ENST00000333323	human	ensembl	74_37	+1	known	missense	c.716	p.R239K	1.000	NULL	NULL	-	no_errors	FAM212A	HGNC	ENSG00000185614				238	0	0	53	41	43.617
GRM2	0	genome.wustl.edu	37	3	51749353	51749353	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	3	51749353	51749353	T	C	SNP	GRM2	ENST00000395052	human	ensembl	74_37	+1	known	missense	c.1564	p.C522R	1.000	pfam_GPCR_3_9-Cys_dom	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM2	HGNC	ENSG00000164082				51	0	0	23	2	8
FAT4	0	genome.wustl.edu	37	4	126239828	126239828	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	4	126239828	126239828	A	C	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.2262	p.E754D	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				55	0	0	54	12	18.1818
C4orf29	0	genome.wustl.edu	37	4	128951826	128951826	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	4	128951826	128951826	A	G	SNP	C4orf29	ENST00000398965	human	ensembl	74_37	+1	known	missense	c.1240	p.R414G	1.000	pfam_DUF2048	pfam_DUF2048	-	no_errors	C4orf29	HGNC	ENSG00000164074				63	0	0	42	3	6.66667
BRD8	0	genome.wustl.edu	37	5	137503739	137503739	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	5	137503739	137503739	G	A	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	missense	c.671	p.S224F	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983				139	0	0	52	43	45.2632
PCDHA9	0	genome.wustl.edu	37	5	140230532	140230532	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	5	140230532	140230532	C	T	SNP	PCDHA9	ENST00000378122	human	ensembl	74_37	+1	known	nonsense	c.2452	p.R818*	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961				138	1	0.719424	98	30	23.4375
ADRB2	0	genome.wustl.edu	37	5	148207465	148207465	+	Silent	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	5	148207465	148207465	C	T	SNP	ADRB2	ENST00000305988	human	ensembl	74_37	+1	known	silent	c.1071	p.N357	0.608	prints_ADRB2_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRB2_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRB2	HGNC	ENSG00000169252				71	0	0	20	26	56.5217
MYOZ3	0	genome.wustl.edu	37	5	150050196	150050196	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	5	150050196	150050196	G	A	SNP	MYOZ3	ENST00000297130	human	ensembl	74_37	+1	known	missense	c.212	p.R71Q	0.000	pfam_Calsarcin-bd	pfam_Calsarcin-bd	-	no_errors	MYOZ3	HGNC	ENSG00000164591				36	0	0	13	6	31.5789
FAM153A	0	genome.wustl.edu	37	5	177156542	177156542	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	5	177156542	177156542	G	T	SNP	FAM153A	ENST00000360669	human	ensembl	74_37	-1	known	missense	c.646	p.L216M	0.000	NULL	prints_FAM153	-	no_errors	FAM153A	HGNC	ENSG00000170074				269	0	0	127	27	17.5325
IYD	0	genome.wustl.edu	37	6	150710675	150710675	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	6	150710675	150710675	G	A	SNP	IYD	ENST00000229447	human	ensembl	74_37	+1	known	silent	c.366	p.T122	0.546	pfam_Nitroreductase-like,superfamily_Nitroreductase-like	pfam_Nitroreductase-like,superfamily_Nitroreductase-like	-	no_errors	IYD	HGNC	ENSG00000009765				86	0	0	55	27	32.9268
SMOC2	0	genome.wustl.edu	37	6	169051410	169051410	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	6	169051410	169051410	G	A	SNP	SMOC2	ENST00000354536	human	ensembl	74_37	+1	known	silent	c.990	p.A330	0.923	pfam_SPARC/Testican_Ca-bd-dom	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_EF_hand_dom,pfscan_Thyroglobulin_1	-	no_errors	SMOC2	HGNC	ENSG00000112562				35	0	0	7	3	30
MICA	0	genome.wustl.edu	37	6	31379817	31379817	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	6	31379817	31379817	T	C	SNP	MICA	ENST00000449934	human	ensembl	74_37	+1	known	missense	c.707	p.I236T	0.000	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	MICA	HGNC	ENSG00000204520				58	0	0	20	3	13.0435
DDX43	0	genome.wustl.edu	37	6	74110065	74110065	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	6	74110065	74110065	T	G	SNP	DDX43	ENST00000370336	human	ensembl	74_37	+1	known	missense	c.415	p.Y139D	0.015	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_KH_dom_type_1,superfamily_P-loop_NTPase,smart_KH_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_KH_dom_type_1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX43	HGNC	ENSG00000080007				51	0	0	54	6	10
C6orf165	0	genome.wustl.edu	37	6	88119576	88119576	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	6	88119576	88119576	G	A	SNP	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	missense	c.19	p.E7K	1.000	NULL	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514				51	0	0	41	12	22.6415
C6orf165	0	genome.wustl.edu	37	6	88125542	88125542	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	6	88125542	88125542	G	A	SNP	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	missense	c.422	p.R141H	0.998	NULL	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514				44	0	0	38	13	25.4902
LRRC17	0	genome.wustl.edu	37	7	102584659	102584659	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	7	102584659	102584659	G	A	SNP	LRRC17	ENST00000339431	human	ensembl	74_37	+1	known	missense	c.931	p.A311T	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC17	HGNC	ENSG00000128606				83	0	0	96	29	23.2
ST7	0	genome.wustl.edu	37	7	116811007	116811007	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	7	116811007	116811007	A	C	SNP	ST7	ENST00000265437	human	ensembl	74_37	+1	known	missense	c.1055	p.Q352P	1.000	pfam_ST7	pfam_ST7	-	no_errors	ST7	HGNC	ENSG00000004866				67	0	0	45	9	16.6667
SOSTDC1	0	genome.wustl.edu	37	7	16502239	16502239	+	Silent	SNP	G	G	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	7	16502239	16502239	G	T	SNP	SOSTDC1	ENST00000307068	human	ensembl	74_37	-1	known	silent	c.555	p.A185	0.998	pfam_Sclerostin/SOSTDC1	pfam_Sclerostin/SOSTDC1,pfam_Cys_knot,pfam_DAN,pfscan_Cys_knot_C	-	no_errors	SOSTDC1	HGNC	ENSG00000171243				166	1	0.598802	95	30	24
KLHL7	0	genome.wustl.edu	37	7	23183596	23183596	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	7	23183596	23183596	G	C	SNP	KLHL7	ENST00000339077	human	ensembl	74_37	+1	known	missense	c.745	p.A249P	1.000	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL7	HGNC	ENSG00000122550				72	0	0	40	47	54.023
C8orf74	0	genome.wustl.edu	37	8	10555329	10555329	+	Silent	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	8	10555329	10555329	C	T	SNP	C8orf74	ENST00000304519	human	ensembl	74_37	+1	known	silent	c.462	p.A154	0.001	NULL	NULL	-	no_errors	C8orf74	HGNC	ENSG00000171060				143	0	0	74	23	23.7113
KCNQ3	0	genome.wustl.edu	37	8	133192544	133192544	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	8	133192544	133192544	C	A	SNP	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	missense	c.637	p.V213F	1.000	pfam_Ion_trans_dom,prints_K_chnl_volt-dep_KCNQ3	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156				146	0	0	68	15	18.0723
TUSC3	0	genome.wustl.edu	37	8	15600974	15600974	+	RNA	SNP	T	T	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	8	15600974	15600974	T	C	SNP	TUSC3	ENST00000508446	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	TUSC3	HGNC	ENSG00000104723				50	0	0	37	11	22.9167
OTUD6B	0	genome.wustl.edu	37	8	92097059	92097059	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	8	92097059	92097059	C	T	SNP	OTUD6B	ENST00000285420	human	ensembl	74_37	+1	known	missense	c.935	p.T312I	0.996	pfscan_OTU	pfam_OTU,pfam_Peptidase_C65_otubain,pfscan_OTU	-	no_errors	OTUD6B	HGNC	ENSG00000155100				13	0	0	19	2	9.52381
ZER1	0	genome.wustl.edu	37	9	131503885	131503885	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	9	131503885	131503885	C	T	SNP	ZER1	ENST00000291900	human	ensembl	74_37	-1	known	missense	c.1666	p.D556N	1.000	superfamily_ARM-type_fold,smart_Armadillo	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ZER1	HGNC	ENSG00000160445				144	0	0	124	20	13.8889
NOTCH1	0	genome.wustl.edu	37	9	139391079	139391079	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	9	139391079	139391079	G	C	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	missense	c.7112	p.T2371S	0.979	pirsf_Notch	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400				139	0	0	78	51	39.5349
TPRN	0	genome.wustl.edu	37	9	140093635	140093635	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	9	140093635	140093635	C	A	SNP	TPRN	ENST00000409012	human	ensembl	74_37	-1	known	missense	c.1529	p.G510V	0.096	NULL	NULL	-	no_errors	TPRN	HGNC	ENSG00000176058				118	0	0	32	47	59.4937
TLN1	0	genome.wustl.edu	37	9	35715063	35715063	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	9	35715063	35715063	C	T	SNP	TLN1	ENST00000314888	human	ensembl	74_37	-1	known	missense	c.2747	p.R916H	1.000	NULL	pfam_Talin_cent,pfam_Vinculin-bd_dom,pfam_ILWEQ_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN1	HGNC	ENSG00000137076				223	0	0	138	25	15.3374
AK3	0	genome.wustl.edu	37	9	4740941	4740941	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	9	4740941	4740941	G	A	SNP	AK3	ENST00000381809	human	ensembl	74_37	-1	known	silent	c.147	p.G49	1.000	pfam_Adenylate_kin,superfamily_P-loop_NTPase,prints_Adenylate_kin,tigrfam_Adenyl_kin_sub	pfam_Adenylate_kin,pfam_Adenylate_kinase_lid-dom,superfamily_P-loop_NTPase,superfamily_Adenylate_kinase_lid-dom,prints_Adenylate_kin,tigrfam_Adenyl_kin_sub	-	no_errors	AK3	HGNC	ENSG00000147853				27	0	0	14	4	22.2222
MT-RNR1	0	genome.wustl.edu	37	MT	847	847	+	RNA	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	MT	847	847	G	A	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459				400	0	0	0	4	100
ACTRT1	0	genome.wustl.edu	37	X	127185409	127185409	+	Silent	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	X	127185409	127185409	G	A	SNP	ACTRT1	ENST00000371124	human	ensembl	74_37	-1	known	silent	c.777	p.P259	0.587	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT1	HGNC	ENSG00000123165				106	0	0	13	128	90.7801
SMARCA1	0	genome.wustl.edu	37	X	128622973	128622973	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	X	128622973	128622973	T	A	SNP	SMARCA1	ENST00000371122	human	ensembl	74_37	-1	known	nonsense	c.2038	p.K680*	1.000	superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038				28	0	0	6	48	88.8889
PLXNA3	0	genome.wustl.edu	37	X	153698478	153698478	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	X	153698478	153698478	G	A	SNP	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	missense	c.4954	p.E1652K	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827				58	0	0	3	29	90.625
USP9X	0	genome.wustl.edu	37	X	41000004	41000004	+	Silent	SNP	A	A	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	X	41000004	41000004	A	G	SNP	USP9X	ENST00000324545	human	ensembl	74_37	+1	known	silent	c.750	p.Q250	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP9X	HGNC	ENSG00000124486				26	0	0	2	36	94.7368
TBX22	0	genome.wustl.edu	37	X	79283522	79283522	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	X	79283522	79283522	C	T	SNP	TBX22	ENST00000373294	human	ensembl	74_37	+1	known	missense	c.896	p.P299L	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX22	HGNC	ENSG00000122145				33	0	0	39	4	9.30233
FAM46C	0	genome.wustl.edu	37	1	118165775	118165775	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	118165775	118165775	C	-	DEL	FAM46C	ENST00000369448	human	ensembl	74_37	+1	known	frame_shift_del	c.285	p.H96fs	0.974	pfam_DUF1693	pfam_DUF1693	-	no_errors	FAM46C	HGNC	ENSG00000183508				166	0	0	46	37	44.5783
MAPKAPK2	0	genome.wustl.edu	37	1	206858676	206858678	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	206858676	206858678	GCC	-	DEL	MAPKAPK2	ENST00000367103	human	ensembl	74_37	+1	known	in_frame_del	c.102_104	p.P38in_frame_del	0.960:1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPKAPK2	HGNC	ENSG00000162889				16	0	0	5	2	28.5714
ARID1A	0	genome.wustl.edu	37	1	27100852	27100852	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	1	27100852	27100852	C	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.4134	p.P1379fs	0.998	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				68	0	0	23	19	45.2381
OR6C76	0	genome.wustl.edu	37	12	55820958	55820959	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	12	55820958	55820959	-	A	INS	OR6C76	ENST00000328314	human	ensembl	74_37	+1	known	frame_shift_ins	c.921_922	p.K311fs	0.003:0.016	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C76	HGNC	ENSG00000185821				24	0	0	25	5	16.6667
HCRT	0	genome.wustl.edu	37	17	40336501	40336503	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	17	40336501	40336503	GCA	-	DEL	HCRT	ENST00000293330	human	ensembl	74_37	-1	known	in_frame_del	c.67_65	p.L22in_frame_del	0.998:0.999:1.000	pfam_Orexin,pirsf_Orexin	pfam_Orexin,pirsf_Orexin,prints_Orexin	-	no_errors	HCRT	HGNC	ENSG00000161610				21	0	0	6	3	33.3333
VMO1	0	genome.wustl.edu	37	17	4689195	4689195	+	Splice_Site	DEL	C	C	-			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	17	4689195	4689195	C	-	DEL	VMO1	ENST00000441199	human	ensembl	74_37	-1	known	splice_site_del	c.345+1	e2+1	0.000	-	-	-	no_errors	VMO1	HGNC	ENSG00000182853				53	0	0	17	2	10.5263
PRKCA	0	genome.wustl.edu	37	17	64683380	64683397	+	Splice_Site	DEL	TACATTGTAAGTGGTCTC	TACATTGTAAGTGGTCTC	-			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	TACATTGTAAGTGGTCTC	TACATTGTAAGTGGTCTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	17	64683380	64683397	TACATTGTAAGTGGTCTC	-	DEL	PRKCA	ENST00000413366	human	ensembl	74_37	+1	known	splice_site_del	c.686+7_686+1	e7-1	0.884:0.962:0.923:0.001:0.997:1.000:1.000:1.000:1.000:1.000:1.000:0.991:0.008:0.000:0.000:0.009:0.009:0.002	-	-	-	no_errors	PRKCA	HGNC	ENSG00000154229				94	0	0	37	23	38.3333
RIPK4	0	genome.wustl.edu	37	21	43165916	43165917	+	Splice_Site	INS	-	-	A			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	21	43165916	43165917	-	A	INS	RIPK4	ENST00000352483	human	ensembl	74_37	-1	known	splice_site_ins	c.1080+2_1080+1	e7+2	0.080:0.979	-	-	-	no_errors	RIPK4	HGNC	ENSG00000183421				109	0	0	45	28	38.3562
PPP1R2P1	0	genome.wustl.edu	37	6	32847310	32847310	+	RNA	DEL	C	C	-			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	6	32847310	32847310	C	-	DEL	PPP1R2P1	ENST00000420261	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PPP1R2P1	HGNC	ENSG00000234515				27	0	0	22	3	12
RNF128	0	genome.wustl.edu	37	X	105937253	105937254	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	X	105937253	105937254	CA	-	DEL	RNF128	ENST00000324342	human	ensembl	74_37	+1	known	frame_shift_del	c.21_22	p.S8fs	0.000:0.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF128	HGNC	ENSG00000133135				28	0	0	4	26	86.6667
PLXNB3	0	genome.wustl.edu	37	X	153042690	153042691	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G6-01A-11D-A24D-08	TCGA-HU-A4G6-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c79ce3d3-4758-4f52-9da1-38f994c99f4e	e3e2739f-5f19-4924-8505-3babfd62f636	X	153042690	153042691	-	G	INS	PLXNB3	ENST00000538966	human	ensembl	74_37	+1	known	frame_shift_ins	c.5024_5025	p.V1678fs	0.998:0.849	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Plexin_repeat,pfam_Semap_dom,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB3	HGNC	ENSG00000198753				10	0	0	8	3	27.2727
