Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
SASS6	0	genome.wustl.edu	37	1	100571405	100571405	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	100571405	100571405	T	A	SNP	SASS6	ENST00000287482	human	ensembl	74_37	-1	known	missense	c.1463	p.D488V	0.955	NULL	NULL	-	no_errors	SASS6	HGNC	ENSG00000156876				22	0	0	19	5	20.8333
CASZ1	0	genome.wustl.edu	37	1	10699245	10699245	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	10699245	10699245	C	G	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	missense	c.5034	p.E1678D	0.999	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940				13	0	0	8	6	42.8571
CASZ1	0	genome.wustl.edu	37	1	10719929	10719929	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	10719929	10719929	C	T	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	silent	c.1170	p.P390	0.166	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940				49	0	0	48	12	20
HENMT1	0	genome.wustl.edu	37	1	109191480	109191480	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	109191480	109191480	C	T	SNP	HENMT1	ENST00000370031	human	ensembl	74_37	-1	known	missense	c.983	p.R328Q	0.000	NULL	NULL	-	no_errors	HENMT1	HGNC	ENSG00000162639				55	0	0	41	15	26.7857
SARS	0	genome.wustl.edu	37	1	109772108	109772108	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	109772108	109772108	C	T	SNP	SARS	ENST00000369923	human	ensembl	74_37	+1	known	missense	c.361	p.R121W	0.998	superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Ser-tRNA-synth_1_N,superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,prints_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	-	no_errors	SARS	HGNC	ENSG00000031698				305	0	0	260	81	23.7537
RBM15	0	genome.wustl.edu	37	1	110884619	110884619	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	110884619	110884619	T	C	SNP	RBM15	ENST00000369784	human	ensembl	74_37	+1	known	silent	c.2592	p.P864	0.999	pfam_SPOC_C,superfamily_SPOC_like_C_dom,pfscan_SPOC_met	pfam_SPOC_C,pfam_RRM_dom,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	RBM15	HGNC	ENSG00000162775				129	0	0	117	44	27.3292
DDX20	0	genome.wustl.edu	37	1	112309020	112309020	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	112309020	112309020	T	C	SNP	DDX20	ENST00000369702	human	ensembl	74_37	+1	known	silent	c.1974	p.S658	0.401	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX20	HGNC	ENSG00000064703				59	0	0	47	15	24.1935
TRIM33	0	genome.wustl.edu	37	1	114940422	114940422	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	114940422	114940422	T	C	SNP	TRIM33	ENST00000358465	human	ensembl	74_37	-1	known	missense	c.3232	p.T1078A	1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	TRIM33	HGNC	ENSG00000197323				84	0	0	65	17	20.7317
NGF	0	genome.wustl.edu	37	1	115829311	115829311	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	115829311	115829311	G	T	SNP	NGF	ENST00000369512	human	ensembl	74_37	-1	known	missense	c.106	p.H36N	1.000	pirsf_Nerve_growth_factor-like,prints_Nerve_growth_factor_bsu_mml	pirsf_Nerve_growth_factor-like,pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,prints_Nerve_growth_factor-rel,prints_Nerve_growth_factor_bsu_mml,prints_Nerve_growth_factor_bsu,pfscan_Nerve_growth_factor-rel	-	no_errors	NGF	HGNC	ENSG00000134259				69	0	0	58	24	29.2683
CD58	0	genome.wustl.edu	37	1	117078722	117078722	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	117078722	117078722	G	A	SNP	CD58	ENST00000369489	human	ensembl	74_37	-1	known	nonsense	c.493	p.Q165*	0.002	NULL	NULL	-	no_errors	CD58	HGNC	ENSG00000116815				53	0	0	41	10	19.6078
IGSF3	0	genome.wustl.edu	37	1	117122035	117122035	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	117122035	117122035	C	T	SNP	IGSF3	ENST00000318837	human	ensembl	74_37	-1	known	missense	c.3373	p.G1125S	0.848	smart_Ig_sub	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF3	HGNC	ENSG00000143061				107	1	0.925926	69	21	23.3333
PTGFRN	0	genome.wustl.edu	37	1	117504095	117504095	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	117504095	117504095	C	T	SNP	PTGFRN	ENST00000393203	human	ensembl	74_37	+1	known	missense	c.1444	p.R482W	0.999	smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PTGFRN	HGNC	ENSG00000134247				77	0	0	69	16	18.8235
TRIM45	0	genome.wustl.edu	37	1	117656056	117656056	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	117656056	117656056	C	T	SNP	TRIM45	ENST00000256649	human	ensembl	74_37	-1	known	missense	c.1519	p.V507M	0.928	superfamily_Ig_E-set	pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM45	HGNC	ENSG00000134253				53	0	0	55	12	17.9104
MIIP	0	genome.wustl.edu	37	1	12091845	12091845	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	12091845	12091845	G	A	SNP	MIIP	ENST00000235332	human	ensembl	74_37	+1	known	missense	c.1147	p.V383I	0.000	NULL	NULL	-	no_errors	MIIP	HGNC	ENSG00000116691				95	0	0	86	25	22.5225
GLTPD1	0	genome.wustl.edu	37	1	1262395	1262395	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	1262395	1262395	C	T	SNP	GLTPD1	ENST00000343938	human	ensembl	74_37	+1	known	silent	c.105	p.S35	0.993	pfam_Glycolipid_transfer_prot_dom,superfamily_Glycolipid_transfer_prot_dom	pfam_Glycolipid_transfer_prot_dom,superfamily_Glycolipid_transfer_prot_dom	-	no_errors	GLTPD1	HGNC	ENSG00000224051				45	0	0	36	9	20
MXRA8	0	genome.wustl.edu	37	1	1289254	1289254	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	1289254	1289254	G	T	SNP	MXRA8	ENST00000445648	human	ensembl	74_37	-1	known	missense	c.1295	p.P432H	0.205	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	MXRA8	HGNC	ENSG00000162576				37	0	0	13	5	27.7778
PRDM2	0	genome.wustl.edu	37	1	14107207	14107207	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	14107207	14107207	C	T	SNP	PRDM2	ENST00000235372	human	ensembl	74_37	+1	known	missense	c.2917	p.P973S	1.000	pirsf_RIZ_retinblastoma-bd_prot	pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pirsf_RIZ_retinblastoma-bd_prot,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM2	HGNC	ENSG00000116731				189	1	0.526316	114	40	25.974
ATAD3B	0	genome.wustl.edu	37	1	1416256	1416256	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	1416256	1416256	A	G	SNP	ATAD3B	ENST00000308647	human	ensembl	74_37	+1	known	missense	c.454	p.N152D	1.000	pfam_DUF3523	pfam_DUF3523,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD3B	HGNC	ENSG00000160072				69	0	0	60	9	13.0435
ENSG00000234978	0	genome.wustl.edu	37	1	142803370	142803370	+	RNA	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	142803370	142803370	T	G	SNP	ENSG00000234978	ENST00000423385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-423O2.5	Clone_based_vega_gene	ENSG00000234978				9	0	0	4	5	55.5556
PDE4DIP	0	genome.wustl.edu	37	1	145015953	145015953	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	145015953	145015953	A	G	SNP	PDE4DIP	ENST00000313382	human	ensembl	74_37	-1	known	silent	c.135	p.S45	0.782	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				452	0	0	457	36	7.30223
ATAD3A	0	genome.wustl.edu	37	1	1454310	1454310	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	1454310	1454310	A	G	SNP	ATAD3A	ENST00000378755	human	ensembl	74_37	+1	known	missense	c.598	p.N200D	1.000	pfam_DUF3523	pfam_DUF3523,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD3A	HGNC	ENSG00000197785				107	0	0	88	6	6.38298
ANKRD34A	0	genome.wustl.edu	37	1	145473393	145473393	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	145473393	145473393	G	A	SNP	ANKRD34A	ENST00000323397	human	ensembl	74_37	+1	known	missense	c.65	p.R22H	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34A	HGNC	ENSG00000181039				99	0	0	68	19	21.8391
NBPF20	0	genome.wustl.edu	37	1	148343698	148343698	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	148343698	148343698	A	G	SNP	NBPF20	ENST00000369202	human	ensembl	74_37	-1	known	missense	c.389	p.L130P	0.025	NULL	pfam_NBPF_dom	-	no_errors	NBPF20	HGNC	ENSG00000203832				123	0	0	107	20	15.748
HIST2H3PS2	0	genome.wustl.edu	37	1	149400398	149400398	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	149400398	149400398	G	T	SNP	HIST2H3PS2	ENST00000392948	human	ensembl	74_37	-1	putative	missense	c.145	p.L49M	1.000	superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST2H3PS2	HGNC	ENSG00000203818				84	0	0	60	26	30.2326
SETDB1	0	genome.wustl.edu	37	1	150923047	150923047	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	150923047	150923047	G	A	SNP	SETDB1	ENST00000271640	human	ensembl	74_37	+1	known	missense	c.1694	p.R565H	0.992	NULL	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Tudor,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETDB1	HGNC	ENSG00000143379				146	0	0	118	43	26.7081
SEMA6C	0	genome.wustl.edu	37	1	151110219	151110219	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	151110219	151110219	C	T	SNP	SEMA6C	ENST00000368913	human	ensembl	74_37	-1	known	missense	c.724	p.E242K	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,pfscan_Semap_dom	-	no_errors	SEMA6C	HGNC	ENSG00000143434				111	0	0	105	32	23.3577
OAZ3	0	genome.wustl.edu	37	1	151740655	151740655	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	151740655	151740655	G	A	SNP	OAZ3	ENST00000315067	human	ensembl	74_37	+1	known	missense	c.290	p.R97H	0.528	pfam_ODC_AZ,superfamily_Acyl_CoA_acyltransferase	pfam_ODC_AZ,superfamily_Acyl_CoA_acyltransferase	-	no_errors	OAZ3	HGNC	ENSG00000143450				34	0	0	23	12	34.2857
HRNR	0	genome.wustl.edu	37	1	152193646	152193646	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	152193646	152193646	T	G	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.459	p.E153D	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915				98	0	0	70	30	30
FLG	0	genome.wustl.edu	37	1	152275687	152275687	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	152275687	152275687	C	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.11675	p.R3892Q	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				122	0	0	91	10	9.90099
FLG	0	genome.wustl.edu	37	1	152275691	152275691	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	152275691	152275691	A	C	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.11671	p.S3891A	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				128	0	0	92	9	8.91089
LCE3E	0	genome.wustl.edu	37	1	152538492	152538492	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	152538492	152538492	G	A	SNP	LCE3E	ENST00000368789	human	ensembl	74_37	-1	known	missense	c.193	p.R65C	0.994	NULL	NULL	-	no_errors	LCE3E	HGNC	ENSG00000185966				163	0	0	106	32	23.1884
DENND4B	0	genome.wustl.edu	37	1	153907284	153907284	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	153907284	153907284	G	C	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	missense	c.2725	p.Q909E	0.990	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837				78	0	0	48	14	22.5806
AQP10	0	genome.wustl.edu	37	1	154293725	154293725	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	154293725	154293725	T	C	SNP	AQP10	ENST00000324978	human	ensembl	74_37	+1	known	missense	c.94	p.F32L	1.000	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,prints_Aquaporin_10,prints_Aquaporin_3,tigrfam_MIP	-	no_errors	AQP10	HGNC	ENSG00000143595				46	0	0	32	12	27.2727
HCN3	0	genome.wustl.edu	37	1	155257991	155257991	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	155257991	155257991	C	T	SNP	HCN3	ENST00000368358	human	ensembl	74_37	+1	known	missense	c.2062	p.R688C	0.999	NULL	pfam_Ion_trans_N,pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN3	HGNC	ENSG00000143630				18	0	0	7	3	30
PKLR	0	genome.wustl.edu	37	1	155265285	155265285	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	155265285	155265285	G	A	SNP	PKLR	ENST00000342741	human	ensembl	74_37	-1	known	silent	c.450	p.P150	0.076	pfam_Pyrv_Knase_brl,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,prints_Pyr_Knase,tigrfam_Pyr_Knase	pfam_Pyrv_Knase_brl,pfam_Pyrv_Knase_C,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,superfamily_Pyrv_Knase_C,superfamily_Pyrv_Knase-like_insert_dom,prints_Pyr_Knase,tigrfam_Pyr_Knase	-	no_errors	PKLR	HGNC	ENSG00000143627				18	0	0	16	6	27.2727
ASH1L	0	genome.wustl.edu	37	1	155449044	155449044	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	155449044	155449044	T	A	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.3617	p.D1206V	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				95	0	0	70	23	24.7312
SEMA4A	0	genome.wustl.edu	37	1	156128200	156128200	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	156128200	156128200	C	A	SNP	SEMA4A	ENST00000355014	human	ensembl	74_37	+1	known	missense	c.385	p.R129S	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4A	HGNC	ENSG00000196189				146	0	0	115	28	19.5804
KIRREL	0	genome.wustl.edu	37	1	158045968	158045968	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	158045968	158045968	C	T	SNP	KIRREL	ENST00000368173	human	ensembl	74_37	+1	known	missense	c.118	p.L40F	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL	HGNC	ENSG00000183853				95	0	0	46	20	30.303
SPTA1	0	genome.wustl.edu	37	1	158637847	158637847	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	158637847	158637847	T	C	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.1839	p.I613M	0.011	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				93	0	0	85	22	20.5607
OR6K6	0	genome.wustl.edu	37	1	158724937	158724937	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	158724937	158724937	C	A	SNP	OR6K6	ENST00000368144	human	ensembl	74_37	+1	known	missense	c.332	p.S111Y	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6K6	HGNC	ENSG00000180433				123	0	0	105	21	16.6667
MNDA	0	genome.wustl.edu	37	1	158813817	158813817	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	158813817	158813817	C	T	SNP	MNDA	ENST00000368141	human	ensembl	74_37	+1	known	missense	c.475	p.P159S	0.000	NULL	pfam_HIN200/IF120x,pfam_DAPIN,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	MNDA	HGNC	ENSG00000163563				224	0	0	220	57	20.5776
OR10J1	0	genome.wustl.edu	37	1	159410041	159410041	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	159410041	159410041	A	T	SNP	OR10J1	ENST00000423932	human	ensembl	74_37	+1	known	missense	c.493	p.I165F	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10J1	HGNC	ENSG00000196184				144	0	0	144	41	22.1622
ATP1A4	0	genome.wustl.edu	37	1	160141484	160141484	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	160141484	160141484	G	A	SNP	ATP1A4	ENST00000368081	human	ensembl	74_37	+1	known	missense	c.1791	p.M597I	1.000	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A4	HGNC	ENSG00000132681				124	0	0	120	34	22.0779
SLAMF6	0	genome.wustl.edu	37	1	160460408	160460408	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	160460408	160460408	G	A	SNP	SLAMF6	ENST00000368057	human	ensembl	74_37	-1	known	silent	c.714	p.F238	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	SLAMF6	HGNC	ENSG00000162739				50	0	0	48	16	25
ARHGAP30	0	genome.wustl.edu	37	1	161018867	161018867	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	161018867	161018867	A	G	SNP	ARHGAP30	ENST00000368013	human	ensembl	74_37	-1	known	silent	c.1944	p.G648	0.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP30	HGNC	ENSG00000186517				179	0	0	158	61	27.8539
ARHGAP30	0	genome.wustl.edu	37	1	161021121	161021121	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	161021121	161021121	A	G	SNP	ARHGAP30	ENST00000368013	human	ensembl	74_37	-1	known	missense	c.1403	p.L468P	0.982	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP30	HGNC	ENSG00000186517				83	0	0	55	16	22.5352
NDUFS2	0	genome.wustl.edu	37	1	161183479	161183479	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	161183479	161183479	G	A	SNP	NDUFS2	ENST00000367993	human	ensembl	74_37	+1	known	missense	c.1253	p.R418H	1.000	pfam_NADH_Q_OxRdtase_suD,tigrfam_NDH1_su_D/H	pfam_NADH_Q_OxRdtase_suD,tigrfam_NDH1_su_D/H	-	no_errors	NDUFS2	HGNC	ENSG00000158864				105	0	0	103	25	19.5312
ATF6	0	genome.wustl.edu	37	1	161928324	161928324	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	161928324	161928324	G	A	SNP	ATF6	ENST00000367942	human	ensembl	74_37	+1	known	silent	c.1893	p.S631	0.699	NULL	pfam_bZIP,smart_bZIP,pfscan_bZIP	-	no_errors	ATF6	HGNC	ENSG00000118217				140	0	0	115	41	26.2821
SPEN	0	genome.wustl.edu	37	1	16257385	16257385	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	16257385	16257385	G	T	SNP	SPEN	ENST00000375759	human	ensembl	74_37	+1	known	missense	c.4650	p.E1550D	0.319	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526				58	0	0	54	16	22.8571
LRRC52	0	genome.wustl.edu	37	1	165532982	165532982	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	165532982	165532982	C	T	SNP	LRRC52	ENST00000294818	human	ensembl	74_37	+1	known	missense	c.863	p.A288V	0.028	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC52	HGNC	ENSG00000162763				80	0	0	71	21	22.8261
CROCCP2	0	genome.wustl.edu	37	1	16945672	16945672	+	RNA	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	16945672	16945672	T	C	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908				294	0	0	299	17	5.37975
KIFAP3	0	genome.wustl.edu	37	1	169951178	169951178	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	169951178	169951178	T	C	SNP	KIFAP3	ENST00000361580	human	ensembl	74_37	-1	known	missense	c.1733	p.D578G	1.000	superfamily_ARM-type_fold,smart_Armadillo	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	KIFAP3	HGNC	ENSG00000075945				38	0	0	50	9	15.2542
MST1L	0	genome.wustl.edu	37	1	17083816	17083816	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	17083816	17083816	G	A	SNP	MST1L	ENST00000455405	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MST1L	HGNC	ENSG00000186715				32	0	0	34	4	10.5263
SUCO	0	genome.wustl.edu	37	1	172558810	172558810	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	172558810	172558810	G	A	SNP	SUCO	ENST00000608151	human	ensembl	74_37	+1	known	missense	c.3025	p.V1009M	0.088	NULL	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUCO	HGNC	ENSG00000094975				58	0	0	47	12	20.339
GNB1	0	genome.wustl.edu	37	1	1736014	1736014	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	1736014	1736014	C	T	SNP	GNB1	ENST00000378609	human	ensembl	74_37	-1	known	missense	c.274	p.A92T	1.000	pirsf_Guanine_nucleotide-bd_bsu,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Gprotein_B,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pirsf_Guanine_nucleotide-bd_bsu,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Gprotein_B,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GNB1	HGNC	ENSG00000078369				45	0	0	20	12	37.5
TNN	0	genome.wustl.edu	37	1	175097762	175097762	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	175097762	175097762	C	T	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	silent	c.3210	p.C1070	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332				110	0	0	76	25	24.7525
PADI1	0	genome.wustl.edu	37	1	17567092	17567092	+	RNA	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	17567092	17567092	T	A	SNP	PADI1	ENST00000460293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PADI1	HGNC	ENSG00000142623				77	0	0	53	20	27.3973
RFWD2	0	genome.wustl.edu	37	1	175916354	175916354	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	175916354	175916354	C	T	SNP	RFWD2	ENST00000367669	human	ensembl	74_37	-1	known	missense	c.2155	p.A719T	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,superfamily_WD40_repeat_dom,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RFWD2	HGNC	ENSG00000143207				125	0	0	100	30	23.0769
ASTN1	0	genome.wustl.edu	37	1	177001903	177001903	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	177001903	177001903	C	T	SNP	ASTN1	ENST00000367654	human	ensembl	74_37	-1	known	missense	c.554	p.R185Q	1.000	NULL	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092				91	0	0	76	22	22.449
AXDND1	0	genome.wustl.edu	37	1	179504046	179504046	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	179504046	179504046	G	C	SNP	AXDND1	ENST00000367618	human	ensembl	74_37	+1	known	missense	c.2980	p.E994Q	0.144	NULL	pfam_Axonemal_dynein_light_chain	-	no_errors	AXDND1	HGNC	ENSG00000162779				27	0	0	32	11	25.5814
CACNA1E	0	genome.wustl.edu	37	1	181767644	181767644	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	181767644	181767644	T	C	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	missense	c.6616	p.C2206R	0.021	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216				65	0	0	54	16	22.8571
ZNF648	0	genome.wustl.edu	37	1	182026250	182026250	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	182026250	182026250	C	T	SNP	ZNF648	ENST00000339948	human	ensembl	74_37	-1	novel	missense	c.896	p.R299H	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930				41	0	0	21	8	27.5862
RGS8	0	genome.wustl.edu	37	1	182617322	182617322	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	182617322	182617322	T	C	SNP	RGS8	ENST00000258302	human	ensembl	74_37	-1	known	missense	c.364	p.K122E	1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS8	HGNC	ENSG00000135824				255	0	0	178	82	31.5385
LAMC1	0	genome.wustl.edu	37	1	183105532	183105532	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	183105532	183105532	C	T	SNP	LAMC1	ENST00000258341	human	ensembl	74_37	+1	known	missense	c.4126	p.R1376C	0.999	NULL	pfam_Laminin_N,pfam_EGF_laminin,pfam_Laminin_B_type_IV,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC1	HGNC	ENSG00000135862				50	0	0	52	22	29.7297
LAMC2	0	genome.wustl.edu	37	1	183201921	183201921	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	183201921	183201921	C	T	SNP	LAMC2	ENST00000264144	human	ensembl	74_37	+1	known	missense	c.2149	p.R717W	0.996	NULL	pfam_EGF_laminin,pfam_Laminin_B_type_IV,superfamily_Growth_fac_rcpt_N_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin	-	no_errors	LAMC2	HGNC	ENSG00000058085				132	0	0	107	41	27.7027
COLGALT2	0	genome.wustl.edu	37	1	184006291	184006291	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	184006291	184006291	C	T	SNP	COLGALT2	ENST00000361927	human	ensembl	74_37	-1	known	silent	c.201	p.T67	0.997	NULL	pfam_Glyco_trans_25	-	no_errors	COLGALT2	HGNC	ENSG00000198756				25	0	0	23	5	17.8571
EDEM3	0	genome.wustl.edu	37	1	184672044	184672044	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	184672044	184672044	T	C	SNP	EDEM3	ENST00000318130	human	ensembl	74_37	-1	known	missense	c.2290	p.M764V	1.000	pfam_Protease-assoc_domain	pfam_Glyco_hydro_47,pfam_Protease-assoc_domain,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	EDEM3	HGNC	ENSG00000116406				44	0	0	36	14	28
SWT1	0	genome.wustl.edu	37	1	185144095	185144095	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	185144095	185144095	C	A	SNP	SWT1	ENST00000367500	human	ensembl	74_37	+1	known	missense	c.816	p.S272R	0.000	NULL	smart_PIN_dom	-	no_errors	SWT1	HGNC	ENSG00000116668				71	0	0	67	29	30.2083
HMCN1	0	genome.wustl.edu	37	1	186026532	186026532	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	186026532	186026532	A	G	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	silent	c.7311	p.S2437	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				66	0	0	58	31	34.8315
HMCN1	0	genome.wustl.edu	37	1	186088390	186088390	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	186088390	186088390	G	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	silent	c.11916	p.A3972	0.614	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				85	0	0	72	17	19.1011
PTGS2	0	genome.wustl.edu	37	1	186645761	186645761	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	186645761	186645761	G	A	SNP	PTGS2	ENST00000367468	human	ensembl	74_37	-1	known	missense	c.808	p.R270W	0.004	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_EG-like_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	PTGS2	HGNC	ENSG00000073756				78	0	0	51	30	37.037
PAX7	0	genome.wustl.edu	37	1	19062357	19062357	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	19062357	19062357	G	A	SNP	PAX7	ENST00000375375	human	ensembl	74_37	+1	known	missense	c.1387	p.G463S	1.000	NULL	pfam_Paired_dom,pfam_Homeobox_dom,pfam_Pax7,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,prints_Paired_dom,pfscan_Homeobox_dom,pfscan_Paired_dom	-	no_errors	PAX7	HGNC	ENSG00000009709				126	0	0	73	32	30.4762
DENND1B	0	genome.wustl.edu	37	1	197611911	197611911	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	197611911	197611911	T	C	SNP	DENND1B	ENST00000367396	human	ensembl	74_37	-1	known	missense	c.602	p.N201S	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1B	HGNC	ENSG00000213047				20	0	0	18	5	21.7391
HTR6	0	genome.wustl.edu	37	1	19992504	19992504	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	19992504	19992504	C	T	SNP	HTR6	ENST00000289753	human	ensembl	74_37	+1	known	silent	c.258	p.N86	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT6_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT6_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HTR6	HGNC	ENSG00000158748				75	0	0	62	22	26.1905
HTR6	0	genome.wustl.edu	37	1	20005625	20005625	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	20005625	20005625	G	A	SNP	HTR6	ENST00000289753	human	ensembl	74_37	+1	known	missense	c.1087	p.G363S	0.964	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT6_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HTR6	HGNC	ENSG00000158748				35	0	0	32	7	17.9487
NR5A2	0	genome.wustl.edu	37	1	200090068	200090068	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	200090068	200090068	G	A	SNP	NR5A2	ENST00000367362	human	ensembl	74_37	+1	known	missense	c.1363	p.V455M	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,pirsf_Steroidogenic_factor_1,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pirsf_Steroidogenic_factor_1,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR5A2	HGNC	ENSG00000116833				65	0	0	62	22	26.1905
GPR25	0	genome.wustl.edu	37	1	200842856	200842856	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	200842856	200842856	C	T	SNP	GPR25	ENST00000304244	human	ensembl	74_37	+1	known	missense	c.691	p.R231W	0.032	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR25	HGNC	ENSG00000170128				70	0	0	46	14	23.3333
GPR25	0	genome.wustl.edu	37	1	200843100	200843100	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	200843100	200843100	G	A	SNP	GPR25	ENST00000304244	human	ensembl	74_37	+1	known	missense	c.935	p.R312H	0.447	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR25	HGNC	ENSG00000170128				63	0	0	45	19	29.6875
GPR25	0	genome.wustl.edu	37	1	200843201	200843201	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	200843201	200843201	G	A	SNP	GPR25	ENST00000304244	human	ensembl	74_37	+1	known	missense	c.1036	p.V346M	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR25	HGNC	ENSG00000170128				19	0	0	10	3	23.0769
CACNA1S	0	genome.wustl.edu	37	1	201081341	201081341	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	201081341	201081341	C	T	SNP	CACNA1S	ENST00000362061	human	ensembl	74_37	-1	known	missense	c.127	p.A43T	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_VDCC_L_a1ssu	-	no_errors	CACNA1S	HGNC	ENSG00000081248				65	0	0	46	11	19.2982
TIMM17A	0	genome.wustl.edu	37	1	201938668	201938668	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	201938668	201938668	C	T	SNP	TIMM17A	ENST00000367287	human	ensembl	74_37	+1	known	nonsense	c.502	p.R168*	1.000	tigrfam_Tim17	pfam_Tim17/Tim22/Tim23/PMP24,tigrfam_Tim17	-	no_errors	TIMM17A	HGNC	ENSG00000134375				76	0	0	67	28	29.4737
PPP1R12B	0	genome.wustl.edu	37	1	202464470	202464470	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	202464470	202464470	C	T	SNP	PPP1R12B	ENST00000336894	human	ensembl	74_37	+1	known	missense	c.2195	p.T732M	0.331	pirsf_Pase-1_reg_su_12A/B/C_euk	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_12A/B/C_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R12B	HGNC	ENSG00000077157				87	0	0	76	24	24
KDM5B	0	genome.wustl.edu	37	1	202724446	202724446	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	202724446	202724446	A	G	SNP	KDM5B	ENST00000367264	human	ensembl	74_37	-1	known	silent	c.1599	p.C533	0.989	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5B	HGNC	ENSG00000117139				89	0	0	82	24	22.6415
CYB5R1	0	genome.wustl.edu	37	1	202935932	202935932	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	202935932	202935932	T	C	SNP	CYB5R1	ENST00000367249	human	ensembl	74_37	-1	known	missense	c.110	p.Q37R	0.000	superfamily_Riboflavin_synthase-like_b-brl	pfam_OxRdtase_FAD/NAD-bd,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_NADH-Cyt_B5_reductase,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Phe_hydroxylase	-	no_errors	CYB5R1	HGNC	ENSG00000159348				48	0	0	27	19	41.3043
PPFIA4	0	genome.wustl.edu	37	1	203020964	203020964	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	203020964	203020964	G	A	SNP	PPFIA4	ENST00000414050	human	ensembl	74_37	+1	known	missense	c.700	p.V234M	0.482	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA4	HGNC	ENSG00000143847				35	0	0	25	12	32.4324
REN	0	genome.wustl.edu	37	1	204130437	204130437	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	204130437	204130437	C	T	SNP	REN	ENST00000272190	human	ensembl	74_37	-1	known	missense	c.356	p.R119H	0.993	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	REN	HGNC	ENSG00000143839				33	0	0	21	6	22.2222
NFASC	0	genome.wustl.edu	37	1	204950930	204950930	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	204950930	204950930	T	C	SNP	NFASC	ENST00000367172	human	ensembl	74_37	+1	known	missense	c.2252	p.M751T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NFASC	HGNC	ENSG00000163531				58	0	0	44	9	16.9811
AVPR1B	0	genome.wustl.edu	37	1	206230974	206230974	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	206230974	206230974	C	T	SNP	AVPR1B	ENST00000367126	human	ensembl	74_37	+1	known	silent	c.1107	p.D369	0.000	prints_Vprs_rcpt_V1B	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_rcpt_V1B,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn,prints_Vprs_V1A_rcpt	-	no_errors	AVPR1B	HGNC	ENSG00000198049				24	0	0	19	10	34.4828
EIF2D	0	genome.wustl.edu	37	1	206782790	206782790	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	206782790	206782790	A	G	SNP	EIF2D	ENST00000271764	human	ensembl	74_37	-1	known	silent	c.270	p.P90	0.849	NULL	pfam_TIF_SUI1,superfamily_TIF_SUI1,superfamily_SWIB_MDM2_domain,superfamily_PUA-like_domain,smart_PUA,pfscan_PUA,pfscan_TIF_SUI1	-	no_errors	EIF2D	HGNC	ENSG00000143486				54	0	0	58	11	15.942
SH2D5	0	genome.wustl.edu	37	1	21054527	21054527	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	21054527	21054527	G	A	SNP	SH2D5	ENST00000444387	human	ensembl	74_37	-1	known	missense	c.11	p.A4V	0.510	NULL	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_SH2	-	no_errors	SH2D5	HGNC	ENSG00000189410				8	0	0	8	3	27.2727
ANGEL2	0	genome.wustl.edu	37	1	213170497	213170497	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	213170497	213170497	C	A	SNP	ANGEL2	ENST00000366962	human	ensembl	74_37	-1	known	nonsense	c.1483	p.G495*	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	ANGEL2	HGNC	ENSG00000174606				56	0	0	47	14	22.9508
ANGEL2	0	genome.wustl.edu	37	1	213180444	213180444	+	RNA	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	213180444	213180444	A	G	SNP	ANGEL2	ENST00000460337	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	ANGEL2	HGNC	ENSG00000174606				28	0	0	38	6	13.6364
PROX1	0	genome.wustl.edu	37	1	214171309	214171309	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	214171309	214171309	G	A	SNP	PROX1	ENST00000261454	human	ensembl	74_37	+1	known	silent	c.1431	p.T477	0.925	pfam_Homeo_prospero_dom	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	-	no_errors	PROX1	HGNC	ENSG00000117707				138	0	0	122	34	21.7949
USH2A	0	genome.wustl.edu	37	1	215955497	215955497	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	215955497	215955497	G	A	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.10627	p.R3543C	0.290	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				46	0	0	39	12	23.5294
RAB3GAP2	0	genome.wustl.edu	37	1	220369673	220369673	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	220369673	220369673	T	C	SNP	RAB3GAP2	ENST00000358951	human	ensembl	74_37	-1	known	silent	c.879	p.A293	0.982	NULL	superfamily_WD40_repeat_dom	-	no_errors	RAB3GAP2	HGNC	ENSG00000118873				104	0	0	84	29	25.6637
MARK1	0	genome.wustl.edu	37	1	220808733	220808733	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	220808733	220808733	T	A	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.1138	p.S380T	0.973	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141				37	0	0	22	8	26.6667
MARK1	0	genome.wustl.edu	37	1	220809209	220809209	+	Silent	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	220809209	220809209	C	A	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	silent	c.1311	p.T437	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141				56	0	0	59	20	25.3165
HSPG2	0	genome.wustl.edu	37	1	22211332	22211332	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	22211332	22211332	A	G	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.1435	p.C479R	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				58	0	0	41	5	10.8696
HSPG2	0	genome.wustl.edu	37	1	22222727	22222727	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	22222727	22222727	C	T	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.140	p.R47H	0.964	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				203	0	0	127	56	30.6011
ENAH	0	genome.wustl.edu	37	1	225706918	225706918	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	225706918	225706918	G	A	SNP	ENAH	ENST00000366844	human	ensembl	74_37	-1	known	missense	c.784	p.R262C	1.000	NULL	pfam_WH1/EVH1,pfam_VASP_tetra,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	ENAH	HGNC	ENSG00000154380				231	1	0.431034	209	77	26.9231
EPHX1	0	genome.wustl.edu	37	1	226032324	226032324	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	226032324	226032324	G	A	SNP	EPHX1	ENST00000272167	human	ensembl	74_37	+1	known	missense	c.1166	p.R389Q	0.027	pfam_AB_hydrolase_1,pirsf_Epoxide_hydrolase	pfam_Epoxide_hydro_N,pfam_AB_hydrolase_1,pirsf_Epoxide_hydrolase,prints_Epox_hydrolase-like	-	no_errors	EPHX1	HGNC	ENSG00000143819				40	0	0	27	4	12.9032
LEFTY2	0	genome.wustl.edu	37	1	226127655	226127655	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	226127655	226127655	C	T	SNP	LEFTY2	ENST00000366820	human	ensembl	74_37	-1	known	missense	c.298	p.V100M	1.000	pfam_TGF-b_N,pirsf_LRDF,prints_LRDF	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,pirsf_LRDF,prints_LRDF	-	no_errors	LEFTY2	HGNC	ENSG00000143768				30	0	0	25	3	10.7143
PARP1	0	genome.wustl.edu	37	1	226567625	226567625	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	226567625	226567625	T	C	SNP	PARP1	ENST00000366794	human	ensembl	74_37	-1	known	missense	c.1541	p.E514G	1.000	pirsf_NAD_ADPRT	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_Znf_PARP,pfam_PADR1,pfam_WGR_domain,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_WGR_domain,pirsf_NAD_ADPRT,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP1	HGNC	ENSG00000143799				170	0	0	115	36	23.8411
MORN1	0	genome.wustl.edu	37	1	2268277	2268277	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	2268277	2268277	G	A	SNP	MORN1	ENST00000378531	human	ensembl	74_37	-1	known	missense	c.1049	p.A350V	0.000	NULL	pfam_MORN,smart_MORN	-	no_errors	MORN1	HGNC	ENSG00000116151				32	0	0	17	5	22.7273
ITPKB	0	genome.wustl.edu	37	1	226924660	226924660	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	226924660	226924660	G	A	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	missense	c.500	p.P167L	0.999	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772				133	0	0	96	23	19.3277
ITPKB	0	genome.wustl.edu	37	1	226925055	226925055	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	226925055	226925055	C	T	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	silent	c.105	p.P35	0.990	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772				27	0	0	29	9	23.6842
CDC42BPA	0	genome.wustl.edu	37	1	227335096	227335096	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	227335096	227335096	C	T	SNP	CDC42BPA	ENST00000334218	human	ensembl	74_37	-1	known	silent	c.858	p.S286	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Pkinase_C,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,superfamily_WD40_repeat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPA	HGNC	ENSG00000143776				63	0	0	43	15	25.8621
MRPL55	0	genome.wustl.edu	37	1	228294449	228294449	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	228294449	228294449	C	T	SNP	MRPL55	ENST00000459783	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MRPL55	HGNC	ENSG00000162910				101	0	0	69	18	20.6897
OBSCN	0	genome.wustl.edu	37	1	228402120	228402120	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	228402120	228402120	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	nonsense	c.1504	p.Q502*	1.000	superfamily_Fibronectin_type3,smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				169	0	0	103	36	25.8993
OBSCN	0	genome.wustl.edu	37	1	228402696	228402696	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	228402696	228402696	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	silent	c.1725	p.T575	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				27	0	0	21	9	30
OBSCN	0	genome.wustl.edu	37	1	228461665	228461665	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	228461665	228461665	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.5332	p.V1778M	0.004	pfam_Ig_I-set,smart_Ig_V-set_subgr,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				27	0	0	24	5	17.2414
MORN1	0	genome.wustl.edu	37	1	2290120	2290120	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	2290120	2290120	G	A	SNP	MORN1	ENST00000378531	human	ensembl	74_37	-1	known	silent	c.780	p.G260	0.000	NULL	pfam_MORN,smart_MORN	-	no_errors	MORN1	HGNC	ENSG00000116151				15	0	0	20	7	25.9259
COG2	0	genome.wustl.edu	37	1	230819335	230819335	+	Silent	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	230819335	230819335	G	T	SNP	COG2	ENST00000366669	human	ensembl	74_37	+1	known	silent	c.1182	p.A394	0.065	NULL	pfam_COG_complex_COG2_C,pfam_COG_su2_N	-	no_errors	COG2	HGNC	ENSG00000135775				54	0	0	48	15	23.8095
TRIM67	0	genome.wustl.edu	37	1	231298765	231298765	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	231298765	231298765	C	T	SNP	TRIM67	ENST00000366652	human	ensembl	74_37	+1	known	missense	c.50	p.P17L	1.000	smart_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM67	HGNC	ENSG00000119283				23	0	0	23	8	25.8065
DISC1	0	genome.wustl.edu	37	1	231906637	231906637	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	231906637	231906637	G	A	SNP	DISC1	ENST00000439617	human	ensembl	74_37	+1	known	silent	c.1455	p.Q485	0.910	superfamily_Prefoldin	superfamily_Prefoldin	-	no_errors	DISC1	HGNC	ENSG00000162946				49	0	0	45	12	21.0526
PCNXL2	0	genome.wustl.edu	37	1	233160952	233160952	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	233160952	233160952	G	A	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	silent	c.4545	p.N1515	0.980	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				114	0	0	95	32	25.1969
KCNK1	0	genome.wustl.edu	37	1	233802541	233802541	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	233802541	233802541	C	T	SNP	KCNK1	ENST00000366621	human	ensembl	74_37	+1	known	missense	c.556	p.L186F	0.017	pirsf_2pore_dom_K_chnl_TASK	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TWIK1,prints_2pore_dom_K_chnl_TWIK,prints_2pore_dom_K_chnl	-	no_errors	KCNK1	HGNC	ENSG00000135750				72	0	0	45	18	28.5714
LUZP1	0	genome.wustl.edu	37	1	23418326	23418326	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	23418326	23418326	G	A	SNP	LUZP1	ENST00000302291	human	ensembl	74_37	-1	known	missense	c.2429	p.P810L	0.340	NULL	NULL	-	no_errors	LUZP1	HGNC	ENSG00000169641				50	0	0	37	16	30.1887
TARBP1	0	genome.wustl.edu	37	1	234529428	234529428	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	234529428	234529428	C	T	SNP	TARBP1	ENST00000040877	human	ensembl	74_37	-1	novel	missense	c.4399	p.V1467M	0.999	pfam_SpoU_MeTrfase	pfam_SpoU_MeTrfase,superfamily_ARM-type_fold	-	no_errors	TARBP1	HGNC	ENSG00000059588				69	0	0	71	25	26.0417
RBM34	0	genome.wustl.edu	37	1	235295057	235295057	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	235295057	235295057	G	A	SNP	RBM34	ENST00000408888	human	ensembl	74_37	-1	known	missense	c.1264	p.R422C	0.001	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM34	HGNC	ENSG00000188739				63	0	0	44	14	24.1379
LYST	0	genome.wustl.edu	37	1	235967817	235967817	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	235967817	235967817	G	A	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	missense	c.3542	p.A1181V	0.991	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669				74	0	0	76	24	24
HNRNPR	0	genome.wustl.edu	37	1	23637504	23637504	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	23637504	23637504	G	A	SNP	HNRNPR	ENST00000374616	human	ensembl	74_37	-1	known	missense	c.1354	p.R452W	1.000	tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	HNRNPR	HGNC	ENSG00000125944				94	0	0	89	30	25.2101
LGALS8	0	genome.wustl.edu	37	1	236700878	236700878	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	236700878	236700878	G	A	SNP	LGALS8	ENST00000352231	human	ensembl	74_37	+1	known	missense	c.127	p.A43T	0.761	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS8	HGNC	ENSG00000116977				14	0	0	17	7	29.1667
RYR2	0	genome.wustl.edu	37	1	237806708	237806708	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	237806708	237806708	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.7297	p.V2433I	0.611	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				91	0	0	76	22	22.449
RYR2	0	genome.wustl.edu	37	1	237865297	237865297	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	237865297	237865297	T	C	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.9381	p.S3127	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				20	0	0	23	10	30.303
ZP4	0	genome.wustl.edu	37	1	238048810	238048810	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	238048810	238048810	G	A	SNP	ZP4	ENST00000366570	human	ensembl	74_37	-1	known	silent	c.1041	p.Y347	0.011	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	ZP4	HGNC	ENSG00000116996				57	0	0	48	9	15.7895
FMN2	0	genome.wustl.edu	37	1	240255952	240255952	+	Silent	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	240255952	240255952	G	T	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	silent	c.543	p.T181	0.979	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				65	0	0	43	17	28.3333
MAP1LC3C	0	genome.wustl.edu	37	1	242159566	242159566	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	242159566	242159566	C	T	SNP	MAP1LC3C	ENST00000357246	human	ensembl	74_37	-1	known	missense	c.343	p.V115M	0.997	pfam_Atg8_fam,pfam_Atg12	pfam_Atg8_fam,pfam_Atg12	-	no_errors	MAP1LC3C	HGNC	ENSG00000197769				120	0	0	71	24	25.2632
KIF26B	0	genome.wustl.edu	37	1	245766056	245766056	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	245766056	245766056	G	A	SNP	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	missense	c.1528	p.D510N	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849				108	0	0	80	21	20.7921
GRHL3	0	genome.wustl.edu	37	1	24666189	24666189	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	24666189	24666189	G	T	SNP	GRHL3	ENST00000350501	human	ensembl	74_37	+1	known	missense	c.984	p.E328D	0.999	pfam_CP2	pfam_CP2,superfamily_C2_dom	-	no_errors	GRHL3	HGNC	ENSG00000158055				280	0	0	193	54	21.8623
AHCTF1	0	genome.wustl.edu	37	1	247076642	247076642	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	247076642	247076642	G	A	SNP	AHCTF1	ENST00000326225	human	ensembl	74_37	-1	known	nonsense	c.475	p.R159*	1.000	superfamily_Quinonprotein_ADH-like_supfam	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	AHCTF1	HGNC	ENSG00000153207				38	0	0	30	11	26.8293
NLRP3	0	genome.wustl.edu	37	1	247588619	247588619	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	247588619	247588619	C	A	SNP	NLRP3	ENST00000336119	human	ensembl	74_37	+1	known	missense	c.1874	p.P625H	1.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711				44	0	0	33	8	19.5122
OR2AK2	0	genome.wustl.edu	37	1	248129532	248129532	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	248129532	248129532	T	G	SNP	OR2AK2	ENST00000366480	human	ensembl	74_37	+1	known	missense	c.899	p.L300R	0.083	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2AK2	HGNC	ENSG00000187080				54	0	0	42	13	23.6364
SRRM1	0	genome.wustl.edu	37	1	24995640	24995640	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	24995640	24995640	G	A	SNP	SRRM1	ENST00000447431	human	ensembl	74_37	+1	known	missense	c.1802	p.R601H	1.000	NULL	pfam_PWI_dom,superfamily_PWI_dom,smart_PWI_dom	-	no_errors	SRRM1	HGNC	ENSG00000133226				78	0	0	62	21	25.3012
MAN1C1	0	genome.wustl.edu	37	1	25944451	25944451	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	25944451	25944451	G	C	SNP	MAN1C1	ENST00000374332	human	ensembl	74_37	+1	known	missense	c.163	p.A55P	0.933	NULL	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	MAN1C1	HGNC	ENSG00000117643				91	0	0	50	9	15.2542
PAFAH2	0	genome.wustl.edu	37	1	26300985	26300985	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	26300985	26300985	C	A	SNP	PAFAH2	ENST00000374282	human	ensembl	74_37	-1	known	missense	c.915	p.R305S	1.000	pfam_PAF_acetylhydro,pirsf_PAF_acetylhydro_eukaryote	pfam_PAF_acetylhydro,pfam_Peptidase_S9,pirsf_PAF_acetylhydro_eukaryote	-	no_errors	PAFAH2	HGNC	ENSG00000158006				37	0	0	29	14	32.5581
RCC1	0	genome.wustl.edu	37	1	28862386	28862386	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	28862386	28862386	G	A	SNP	RCC1	ENST00000373831	human	ensembl	74_37	+1	known	missense	c.758	p.R253Q	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RCC1	HGNC	ENSG00000180198				147	0	0	112	42	27.2727
PTPRU	0	genome.wustl.edu	37	1	29581830	29581830	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	29581830	29581830	C	T	SNP	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	silent	c.117	p.C39	0.772	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom,prints_MAM_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656				60	0	0	46	25	35.2113
COL16A1	0	genome.wustl.edu	37	1	32163710	32163710	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	32163710	32163710	C	T	SNP	COL16A1	ENST00000271069	human	ensembl	74_37	-1	known	missense	c.454	p.D152N	0.993	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL16A1	HGNC	ENSG00000084636				123	0	0	65	26	28.5714
MEGF6	0	genome.wustl.edu	37	1	3417789	3417789	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	3417789	3417789	C	T	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	missense	c.2398	p.G800R	1.000	smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591				38	0	0	21	10	32.2581
ZC3H12A	0	genome.wustl.edu	37	1	37949169	37949169	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	37949169	37949169	C	T	SNP	ZC3H12A	ENST00000373087	human	ensembl	74_37	+1	known	missense	c.1757	p.A586V	0.995	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12A	HGNC	ENSG00000163874				46	0	0	32	8	20
SNIP1	0	genome.wustl.edu	37	1	38003355	38003355	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	38003355	38003355	G	A	SNP	SNIP1	ENST00000296215	human	ensembl	74_37	-1	known	silent	c.1185	p.D395	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	SNIP1	HGNC	ENSG00000163877				77	0	0	56	24	30
C1orf174	0	genome.wustl.edu	37	1	3807424	3807424	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	3807424	3807424	G	A	SNP	C1orf174	ENST00000361605	human	ensembl	74_37	-1	known	silent	c.327	p.G109	0.000	NULL	NULL	-	no_errors	C1orf174	HGNC	ENSG00000198912				47	0	0	24	7	22.5806
EPHA10	0	genome.wustl.edu	37	1	38227637	38227637	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	38227637	38227637	C	T	SNP	EPHA10	ENST00000427468	human	ensembl	74_37	-1	known	missense	c.290	p.R97H	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_SAM/pointed,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA10	HGNC	ENSG00000183317				177	0	0	137	49	26.3441
PPT1	0	genome.wustl.edu	37	1	40546146	40546146	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	40546146	40546146	C	T	SNP	PPT1	ENST00000433473	human	ensembl	74_37	-1	known	missense	c.550	p.E184K	0.984	pfam_Palm_thioest	pfam_Palm_thioest,prints_Palm_thioest	-	no_errors	PPT1	HGNC	ENSG00000131238				232	0	0	201	53	20.8661
COL9A2	0	genome.wustl.edu	37	1	40770189	40770189	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	40770189	40770189	C	T	SNP	COL9A2	ENST00000372748	human	ensembl	74_37	-1	known	missense	c.1174	p.E392K	0.995	NULL	pfam_Collagen	-	no_errors	COL9A2	HGNC	ENSG00000049089				51	0	0	22	15	40.5405
CLDN19	0	genome.wustl.edu	37	1	43205546	43205546	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	43205546	43205546	C	T	SNP	CLDN19	ENST00000296387	human	ensembl	74_37	-1	known	silent	c.189	p.Q63	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	-	no_errors	CLDN19	HGNC	ENSG00000164007				39	0	0	22	8	26.6667
LEPRE1	0	genome.wustl.edu	37	1	43223475	43223475	+	Silent	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	43223475	43223475	G	C	SNP	LEPRE1	ENST00000236040	human	ensembl	74_37	-1	known	silent	c.1059	p.T353	0.002	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	LEPRE1	HGNC	ENSG00000117385				157	0	0	113	33	22.6027
TIE1	0	genome.wustl.edu	37	1	43778274	43778274	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	43778274	43778274	T	C	SNP	TIE1	ENST00000372476	human	ensembl	74_37	+1	known	splice_site	c.1927+2	e12+2	0.917	-	-	-	no_errors	TIE1	HGNC	ENSG00000066056				59	0	0	46	7	13.2075
IPO13	0	genome.wustl.edu	37	1	44433122	44433122	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	44433122	44433122	C	T	SNP	IPO13	ENST00000372343	human	ensembl	74_37	+1	known	missense	c.2749	p.R917C	1.000	NULL	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO13	HGNC	ENSG00000117408				43	0	0	25	17	40.4762
EIF2B3	0	genome.wustl.edu	37	1	45340387	45340387	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	45340387	45340387	T	C	SNP	EIF2B3	ENST00000360403	human	ensembl	74_37	-1	known	missense	c.1165	p.N389D	1.000	NULL	pfam_NTP_transferase	-	no_errors	EIF2B3	HGNC	ENSG00000070785				106	0	0	82	23	21.9048
MAST2	0	genome.wustl.edu	37	1	46497966	46497966	+	Silent	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	46497966	46497966	A	C	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	silent	c.3304	p.R1102	1.000	superfamily_PDZ	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015				94	0	0	75	26	25.7426
FAAH	0	genome.wustl.edu	37	1	46874199	46874199	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	46874199	46874199	G	A	SNP	FAAH	ENST00000243167	human	ensembl	74_37	+1	known	silent	c.1020	p.P340	0.011	pfam_Amidase,superfamily_Amidase_dom,pirsf_Amidase_fun	pfam_Amidase,superfamily_Amidase_dom,pirsf_Amidase_fun	-	no_errors	FAAH	HGNC	ENSG00000117480				349	0	0	234	74	24.026
DMBX1	0	genome.wustl.edu	37	1	46977919	46977919	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	46977919	46977919	C	T	SNP	DMBX1	ENST00000371956	human	ensembl	74_37	+1	known	missense	c.902	p.A301V	0.982	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	DMBX1	HGNC	ENSG00000197587				55	0	0	28	16	36.3636
ELAVL4	0	genome.wustl.edu	37	1	50661259	50661259	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	50661259	50661259	C	T	SNP	ELAVL4	ENST00000371821	human	ensembl	74_37	+1	known	missense	c.550	p.R184C	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL4	HGNC	ENSG00000162374				116	0	0	83	28	25.2252
NRD1	0	genome.wustl.edu	37	1	52269613	52269613	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	52269613	52269613	A	G	SNP	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	missense	c.2390	p.V797A	1.000	superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	NRD1	HGNC	ENSG00000078618				31	0	0	22	10	31.25
NRD1	0	genome.wustl.edu	37	1	52280256	52280256	+	Nonsense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	52280256	52280256	A	T	SNP	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	nonsense	c.1790	p.L597*	1.000	pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	NRD1	HGNC	ENSG00000078618				42	0	0	52	18	25.7143
CC2D1B	0	genome.wustl.edu	37	1	52825200	52825200	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	52825200	52825200	C	T	SNP	CC2D1B	ENST00000371586	human	ensembl	74_37	-1	known	missense	c.949	p.G317S	0.999	smart_DM14	pfam_C2_dom,superfamily_C2_dom,smart_DM14,smart_C2_dom	-	no_errors	CC2D1B	HGNC	ENSG00000154222				51	0	0	34	13	27.6596
HSPB11	0	genome.wustl.edu	37	1	54405717	54405717	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	54405717	54405717	G	A	SNP	HSPB11	ENST00000371378	human	ensembl	74_37	-1	known	silent	c.39	p.S13	0.008	superfamily_Galactose-bd-like	superfamily_Galactose-bd-like	-	no_errors	HSPB11	HGNC	ENSG00000081870				36	0	0	32	6	15.7895
ACOT11	0	genome.wustl.edu	37	1	55072844	55072844	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	55072844	55072844	G	A	SNP	ACOT11	ENST00000371316	human	ensembl	74_37	+1	known	missense	c.1408	p.A470T	0.972	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	pfam_START_lipid-bd_dom,pfam_Thioestr_supf,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	ACOT11	HGNC	ENSG00000162390				58	0	0	45	11	19.6429
NPHP4	0	genome.wustl.edu	37	1	5965733	5965733	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	5965733	5965733	C	T	SNP	NPHP4	ENST00000378156	human	ensembl	74_37	-1	known	silent	c.1722	p.T574	0.004	NULL	NULL	-	no_errors	NPHP4	HGNC	ENSG00000131697				37	0	0	20	10	33.3333
CHD5	0	genome.wustl.edu	37	1	6171885	6171885	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	6171885	6171885	G	A	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	silent	c.5199	p.Y1733	0.965	pfam_CHD_C2	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254				83	0	0	61	14	18.6667
JAK1	0	genome.wustl.edu	37	1	65335036	65335036	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	65335036	65335036	A	G	SNP	JAK1	ENST00000342505	human	ensembl	74_37	-1	known	missense	c.605	p.M202T	1.000	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak1,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	JAK1	HGNC	ENSG00000162434				87	0	0	66	23	25.8427
AK4	0	genome.wustl.edu	37	1	65614197	65614197	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	65614197	65614197	G	A	SNP	AK4	ENST00000327299	human	ensembl	74_37	+1	known	missense	c.107	p.S36N	1.000	pfam_Adenylate_kin,superfamily_P-loop_NTPase,tigrfam_Adenyl_kin_sub	pfam_Adenylate_kin,pfam_Adenylate_kinase_lid-dom,superfamily_P-loop_NTPase,superfamily_Adenylate_kinase_lid-dom,prints_Adenylate_kin,tigrfam_Adenyl_kin_sub	-	no_errors	AK4	HGNC	ENSG00000162433				9	0	0	6	4	40
DNAJC6	0	genome.wustl.edu	37	1	65858124	65858124	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	65858124	65858124	G	A	SNP	DNAJC6	ENST00000371069	human	ensembl	74_37	+1	known	silent	c.1479	p.S493	0.036	NULL	pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_C2_dom,smart_DnaJ_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	DNAJC6	HGNC	ENSG00000116675				23	0	0	16	5	23.8095
IL23R	0	genome.wustl.edu	37	1	67648522	67648522	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	67648522	67648522	C	T	SNP	IL23R	ENST00000347310	human	ensembl	74_37	+1	known	missense	c.371	p.P124L	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL23R	HGNC	ENSG00000162594				162	0	0	162	35	17.7665
PIN1P1	0	genome.wustl.edu	37	1	70385472	70385472	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	70385472	70385472	C	T	SNP	PIN1P1	ENST00000412108	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	PIN1P1	HGNC	ENSG00000229359				26	0	0	17	6	26.087
FPGT-TNNI3K	0	genome.wustl.edu	37	1	74663944	74663944	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	74663944	74663944	T	C	SNP	FPGT-TNNI3K	ENST00000557284	human	ensembl	74_37	+1	known	silent	c.21	p.G7	0.000	NULL	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	FPGT-TNNI3K	HGNC	ENSG00000259030				88	0	0	60	21	25.9259
ST6GALNAC5	0	genome.wustl.edu	37	1	77509992	77509992	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	77509992	77509992	G	A	SNP	ST6GALNAC5	ENST00000477717	human	ensembl	74_37	+1	known	missense	c.365	p.R122H	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST6GALNAC5	HGNC	ENSG00000117069				68	0	0	57	26	31.3253
PER3	0	genome.wustl.edu	37	1	7887694	7887694	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	7887694	7887694	C	T	SNP	PER3	ENST00000361923	human	ensembl	74_37	+1	known	missense	c.2681	p.P894L	0.002	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER3	HGNC	ENSG00000049246				103	0	0	102	37	26.6187
PKN2	0	genome.wustl.edu	37	1	89226025	89226025	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	89226025	89226025	A	G	SNP	PKN2	ENST00000370521	human	ensembl	74_37	+1	known	missense	c.470	p.N157S	1.000	pfam_HR1_rho-bd,superfamily_HR1_rho-bd,smart_HR1_rho-bd	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN2	HGNC	ENSG00000065243				83	0	0	80	23	22.3301
NOC2L	0	genome.wustl.edu	37	1	894619	894619	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	894619	894619	A	G	SNP	NOC2L	ENST00000327044	human	ensembl	74_37	-1	known	missense	c.2	p.M1T	0.990	NULL	pfam_Noc2,superfamily_ARM-type_fold	-	no_errors	NOC2L	HGNC	ENSG00000188976				21	0	0	13	9	40.9091
LRRC8C	0	genome.wustl.edu	37	1	90179228	90179228	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	90179228	90179228	A	G	SNP	LRRC8C	ENST00000370454	human	ensembl	74_37	+1	known	missense	c.1099	p.K367E	1.000	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8C	HGNC	ENSG00000171488				46	0	0	31	8	20.5128
SLC2A7	0	genome.wustl.edu	37	1	9063463	9063463	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	9063463	9063463	G	A	SNP	SLC2A7	ENST00000400906	human	ensembl	74_37	-1	known	missense	c.1435	p.R479C	0.280	pfam_Sub_transporter	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A7	HGNC	ENSG00000197241				82	0	0	50	18	26.4706
ARHGAP29	0	genome.wustl.edu	37	1	94667313	94667313	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	94667313	94667313	C	T	SNP	ARHGAP29	ENST00000260526	human	ensembl	74_37	-1	known	missense	c.1244	p.R415Q	0.958	NULL	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	ARHGAP29	HGNC	ENSG00000137962				48	0	0	39	10	20.4082
PYROXD2	0	genome.wustl.edu	37	10	100146994	100146994	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	100146994	100146994	T	C	SNP	PYROXD2	ENST00000370575	human	ensembl	74_37	-1	known	silent	c.1518	p.P506	0.099	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Amino_oxidase	-	no_errors	PYROXD2	HGNC	ENSG00000119943				55	0	0	34	19	35.8491
PYROXD2	0	genome.wustl.edu	37	10	100147054	100147054	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	100147054	100147054	G	A	SNP	PYROXD2	ENST00000370575	human	ensembl	74_37	-1	known	silent	c.1458	p.C486	1.000	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Amino_oxidase	-	no_errors	PYROXD2	HGNC	ENSG00000119943				40	0	0	25	7	21.875
PYROXD2	0	genome.wustl.edu	37	10	100148258	100148258	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	100148258	100148258	T	C	SNP	PYROXD2	ENST00000370575	human	ensembl	74_37	-1	known	missense	c.1300	p.I434V	1.000	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Amino_oxidase	-	no_errors	PYROXD2	HGNC	ENSG00000119943				19	0	0	10	3	23.0769
GOT1	0	genome.wustl.edu	37	10	101163327	101163327	+	Silent	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	101163327	101163327	G	T	SNP	GOT1	ENST00000370508	human	ensembl	74_37	-1	known	silent	c.858	p.S286	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,prints_Asp_trans	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,prints_Asp_trans	-	no_errors	GOT1	HGNC	ENSG00000120053				103	0	0	83	29	25.8929
SEC31B	0	genome.wustl.edu	37	10	102257433	102257433	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	102257433	102257433	C	T	SNP	SEC31B	ENST00000370345	human	ensembl	74_37	-1	known	missense	c.1981	p.E661K	0.762	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31B	HGNC	ENSG00000075826				81	0	0	60	21	25.9259
LZTS2	0	genome.wustl.edu	37	10	102762432	102762432	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	102762432	102762432	G	A	SNP	LZTS2	ENST00000370220	human	ensembl	74_37	+1	known	missense	c.137	p.R46H	0.995	NULL	NULL	-	no_errors	LZTS2	HGNC	ENSG00000107816				111	0	0	50	18	26.4706
ELOVL3	0	genome.wustl.edu	37	10	103988245	103988245	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	103988245	103988245	T	C	SNP	ELOVL3	ENST00000370005	human	ensembl	74_37	+1	known	missense	c.305	p.V102A	1.000	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL3	HGNC	ENSG00000119915				63	0	0	57	21	26.9231
ACTR1A	0	genome.wustl.edu	37	10	104241809	104241809	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	104241809	104241809	G	A	SNP	ACTR1A	ENST00000369905	human	ensembl	74_37	-1	known	missense	c.874	p.R292C	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTR1A	HGNC	ENSG00000138107				154	0	0	111	36	24.4898
PDCD11	0	genome.wustl.edu	37	10	105187133	105187133	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	105187133	105187133	T	C	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.3353	p.L1118P	1.000	superfamily_NA-bd_OB-fold	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843				135	0	0	107	37	25.6944
CCDC147	0	genome.wustl.edu	37	10	106121892	106121892	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	106121892	106121892	G	A	SNP	CCDC147	ENST00000369704	human	ensembl	74_37	+1	known	missense	c.403	p.E135K	0.999	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC147	HGNC	ENSG00000120051				27	0	0	35	13	27.0833
CCDC147	0	genome.wustl.edu	37	10	106160488	106160488	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	106160488	106160488	T	C	SNP	CCDC147	ENST00000369704	human	ensembl	74_37	+1	known	silent	c.1866	p.D622	0.580	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC147	HGNC	ENSG00000120051				96	0	0	91	31	25.4098
GPAM	0	genome.wustl.edu	37	10	113920602	113920602	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	113920602	113920602	C	T	SNP	GPAM	ENST00000348367	human	ensembl	74_37	-1	known	missense	c.1519	p.E507K	1.000	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	GPAM	HGNC	ENSG00000119927				35	0	0	22	8	26.6667
ZDHHC6	0	genome.wustl.edu	37	10	114200317	114200317	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	114200317	114200317	G	A	SNP	ZDHHC6	ENST00000369405	human	ensembl	74_37	-1	known	missense	c.656	p.A219V	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfam_SH3_2,superfamily_SH3_domain,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC6	HGNC	ENSG00000023041				82	0	0	78	16	17.0213
TCF7L2	0	genome.wustl.edu	37	10	114925707	114925707	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	114925707	114925707	G	A	SNP	TCF7L2	ENST00000355995	human	ensembl	74_37	+1	known	silent	c.1836	p.S612	1.000	NULL	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7L2	HGNC	ENSG00000148737				100	0	0	64	23	26.4368
GRK5	0	genome.wustl.edu	37	10	120967430	120967430	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	120967430	120967430	A	G	SNP	GRK5	ENST00000392870	human	ensembl	74_37	+1	known	missense	c.1	p.M1V	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK5	HGNC	ENSG00000198873				37	0	0	22	9	29.0323
ADARB2	0	genome.wustl.edu	37	10	1230952	1230952	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	1230952	1230952	G	A	SNP	ADARB2	ENST00000381312	human	ensembl	74_37	-1	known	missense	c.1892	p.P631L	0.991	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADARB2	HGNC	ENSG00000185736				53	0	0	28	17	37.7778
ZRANB1	0	genome.wustl.edu	37	10	126631559	126631559	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	126631559	126631559	C	A	SNP	ZRANB1	ENST00000359653	human	ensembl	74_37	+1	known	missense	c.497	p.A166D	1.000	pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_Znf_RanBP2	pfam_OTU,pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_OTU,pfscan_Znf_RanBP2	-	no_errors	ZRANB1	HGNC	ENSG00000019995				85	0	0	43	12	21.8182
DHX32	0	genome.wustl.edu	37	10	127548316	127548316	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	127548316	127548316	T	C	SNP	DHX32	ENST00000284690	human	ensembl	74_37	-1	known	missense	c.705	p.I235M	0.217	superfamily_P-loop_NTPase,pfscan_Helicase_ATP-bd	pfam_Helicase-assoc_dom,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd	-	no_errors	DHX32	HGNC	ENSG00000089876				96	0	0	70	36	33.9623
MKI67	0	genome.wustl.edu	37	10	129913862	129913862	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	129913862	129913862	G	A	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	silent	c.810	p.Y270	0.000	NULL	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773				45	0	0	37	15	28.8462
EBF3	0	genome.wustl.edu	37	10	131671783	131671783	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	131671783	131671783	G	A	SNP	EBF3	ENST00000355311	human	ensembl	74_37	-1	known	silent	c.714	p.S238	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF3	HGNC	ENSG00000108001				55	0	0	46	13	22.0339
CYP2E1	0	genome.wustl.edu	37	10	135342020	135342020	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	135342020	135342020	C	T	SNP	CYP2E1	ENST00000252945	human	ensembl	74_37	+1	known	silent	c.213	p.Y71	0.031	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2E-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2E1	HGNC	ENSG00000130649				70	0	0	65	14	17.7215
PRPF18	0	genome.wustl.edu	37	10	13642313	13642313	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	13642313	13642313	G	A	SNP	PRPF18	ENST00000378572	human	ensembl	74_37	+1	known	missense	c.214	p.E72K	1.000	NULL	pfam_Prp18,pfam_PRP4-like,superfamily_Prp18,smart_SFM	-	no_errors	PRPF18	HGNC	ENSG00000165630				50	0	0	48	10	17.2414
CUBN	0	genome.wustl.edu	37	10	16996544	16996544	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	16996544	16996544	A	G	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.4699	p.Y1567H	0.186	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				50	0	0	35	5	12.5
VIM	0	genome.wustl.edu	37	10	17276790	17276790	+	Silent	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	17276790	17276790	C	A	SNP	VIM	ENST00000224237	human	ensembl	74_37	+1	known	silent	c.981	p.T327	1.000	pfam_IF,superfamily_Prefoldin	pfam_IF,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin	-	no_errors	VIM	HGNC	ENSG00000026025				49	0	0	50	21	29.5775
SLC39A12	0	genome.wustl.edu	37	10	18289716	18289716	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	18289716	18289716	C	T	SNP	SLC39A12	ENST00000377369	human	ensembl	74_37	+1	known	missense	c.1721	p.T574M	0.952	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A12	HGNC	ENSG00000148482				51	0	0	40	12	23.0769
NEBL	0	genome.wustl.edu	37	10	21141528	21141528	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	21141528	21141528	A	G	SNP	NEBL	ENST00000377122	human	ensembl	74_37	-1	known	silent	c.954	p.D318	0.000	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	NEBL	HGNC	ENSG00000078114				35	0	0	34	11	24.4444
DNAJC1	0	genome.wustl.edu	37	10	22048203	22048203	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	22048203	22048203	T	C	SNP	DNAJC1	ENST00000376980	human	ensembl	74_37	-1	known	missense	c.1492	p.T498A	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_DnaJ_domain,pfam_SANT/Myb,superfamily_DnaJ_domain,superfamily_Homeodomain-like,smart_DnaJ_domain,smart_SANT/Myb,pfscan_Myb-like_dom,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC1	HGNC	ENSG00000136770				124	1	0.8	83	28	25.2252
KIAA1217	0	genome.wustl.edu	37	10	24833918	24833918	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	24833918	24833918	C	T	SNP	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	silent	c.5220	p.S1740	0.018	NULL	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549				148	0	0	119	32	21.1921
SVIL	0	genome.wustl.edu	37	10	29821473	29821473	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	29821473	29821473	C	T	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.1823	p.C608Y	0.973	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				43	0	0	47	9	16.0714
ZEB1	0	genome.wustl.edu	37	10	31809819	31809819	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	31809819	31809819	A	G	SNP	ZEB1	ENST00000361642	human	ensembl	74_37	+1	known	missense	c.1559	p.D520G	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZEB1	HGNC	ENSG00000148516				51	0	0	61	27	30.6818
FZD8	0	genome.wustl.edu	37	10	35930056	35930056	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	35930056	35930056	T	G	SNP	FZD8	ENST00000374694	human	ensembl	74_37	-1	known	missense	c.302	p.K101T	1.000	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD8	HGNC	ENSG00000177283				49	0	0	41	19	31.6667
ANKRD30A	0	genome.wustl.edu	37	10	37414926	37414926	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	37414926	37414926	G	A	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	missense	c.43	p.A15T	0.001	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513				72	0	0	48	13	21.3115
RET	0	genome.wustl.edu	37	10	43602002	43602002	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	43602002	43602002	C	T	SNP	RET	ENST00000355710	human	ensembl	74_37	+1	known	missense	c.1046	p.A349V	0.963	pirsf_Tyr_kinase_Ret_rcpt,superfamily_Cadherin-like	pirsf_Tyr_kinase_Ret_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cadherin,superfamily_Kinase-like_dom,superfamily_Cadherin-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Cadherin	-	no_errors	RET	HGNC	ENSG00000165731				32	0	0	25	9	26.4706
CSGALNACT2	0	genome.wustl.edu	37	10	43659393	43659393	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	43659393	43659393	C	T	SNP	CSGALNACT2	ENST00000374466	human	ensembl	74_37	+1	known	nonsense	c.1060	p.R354*	0.997	pfam_Chond_GalNAc	pfam_Chond_GalNAc	-	no_errors	CSGALNACT2	HGNC	ENSG00000169826				57	0	0	48	15	23.8095
GPRIN2	0	genome.wustl.edu	37	10	46999909	46999909	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	46999909	46999909	G	A	SNP	GPRIN2	ENST00000374314	human	ensembl	74_37	+1	known	silent	c.1029	p.A343	0.865	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175				85	0	0	78	9	10.3448
GDF2	0	genome.wustl.edu	37	10	48416366	48416366	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	48416366	48416366	G	A	SNP	GDF2	ENST00000249598	human	ensembl	74_37	-1	known	missense	c.328	p.R110W	1.000	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	GDF2	HGNC	ENSG00000128802				43	0	0	44	7	13.7255
ERCC6	0	genome.wustl.edu	37	10	50701224	50701224	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	50701224	50701224	G	A	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	missense	c.1760	p.T587M	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830				47	0	0	36	10	21.7391
PCDH15	0	genome.wustl.edu	37	10	55943317	55943317	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	55943317	55943317	C	T	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.1477	p.V493I	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				76	0	0	74	27	26.7327
FAM208B	0	genome.wustl.edu	37	10	5772584	5772584	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	5772584	5772584	C	T	SNP	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	missense	c.622	p.R208C	0.507	NULL	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021				58	0	0	55	19	25.6757
RUFY2	0	genome.wustl.edu	37	10	70138358	70138358	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	70138358	70138358	C	T	SNP	RUFY2	ENST00000399200	human	ensembl	74_37	-1	known	silent	c.1173	p.T391	0.817	NULL	pfam_Run	-	no_errors	RUFY2	HGNC	ENSG00000204130				28	0	0	28	6	17.6471
CDH23	0	genome.wustl.edu	37	10	73437370	73437370	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	73437370	73437370	G	A	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.1687	p.V563M	0.803	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				16	0	0	12	4	25
CDH23	0	genome.wustl.edu	37	10	73464873	73464873	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	73464873	73464873	C	T	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.2954	p.T985M	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				46	0	0	40	15	27.2727
SPOCK2	0	genome.wustl.edu	37	10	73827479	73827479	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	73827479	73827479	C	T	SNP	SPOCK2	ENST00000317376	human	ensembl	74_37	-1	known	missense	c.601	p.G201S	0.995	pfam_SPARC/Testican_Ca-bd-dom	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK2	HGNC	ENSG00000107742				24	0	0	20	5	20
NUDT13	0	genome.wustl.edu	37	10	74879892	74879892	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	74879892	74879892	T	G	SNP	NUDT13	ENST00000357321	human	ensembl	74_37	+1	known	missense	c.200	p.L67R	0.002	pfam_NADH_PPase-like_N	pfam_NUDIX_hydrolase_dom,pfam_NADH_PPase-like_N,pfam_Znr_NADH_PPase,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT13	HGNC	ENSG00000166321				73	0	0	56	16	22.2222
CHCHD1	0	genome.wustl.edu	37	10	75541869	75541869	+	Silent	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	75541869	75541869	G	C	SNP	CHCHD1	ENST00000372833	human	ensembl	74_37	+1	known	silent	c.36	p.R12	0.001	NULL	pfam_CHCH,superfamily_Cys_alpha_HP_mot_SF	-	no_errors	CHCHD1	HGNC	ENSG00000172586				149	0	0	95	30	24
NDST2	0	genome.wustl.edu	37	10	75565424	75565424	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	75565424	75565424	C	T	SNP	NDST2	ENST00000309979	human	ensembl	74_37	-1	known	missense	c.1667	p.R556H	1.000	NULL	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST2	HGNC	ENSG00000166507				77	0	0	44	13	22.807
KAT6B	0	genome.wustl.edu	37	10	76603125	76603125	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	76603125	76603125	G	A	SNP	KAT6B	ENST00000287239	human	ensembl	74_37	+1	known	silent	c.510	p.P170	0.176	smart_Histone_H1/H5_H15	pfam_MOZ_SAS,pfam_Znf_PHD-finger,pfam_Histone_H1/H5_H15,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6B	HGNC	ENSG00000156650				67	0	0	54	10	15.625
KCNMA1	0	genome.wustl.edu	37	10	78870034	78870034	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	78870034	78870034	A	G	SNP	KCNMA1	ENST00000406533	human	ensembl	74_37	-1	known	missense	c.1028	p.V343A	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_RCK_N,prints_K_chnl_Ca-activ_BK_asu,prints_K_chnl	-	no_errors	KCNMA1	HGNC	ENSG00000156113				231	0	0	222	78	26
NRG3	0	genome.wustl.edu	37	10	83635520	83635520	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	83635520	83635520	G	A	SNP	NRG3	ENST00000404547	human	ensembl	74_37	+1	known	missense	c.424	p.A142T	0.977	NULL	pfscan_EG-like_dom	-	no_errors	NRG3	HGNC	ENSG00000185737				64	0	0	36	15	29.4118
CDHR1	0	genome.wustl.edu	37	10	85974164	85974164	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	85974164	85974164	G	A	SNP	CDHR1	ENST00000372117	human	ensembl	74_37	+1	known	silent	c.2367	p.P789	0.001	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR1	HGNC	ENSG00000148600				162	1	0.613497	104	34	24.6377
LRIT1	0	genome.wustl.edu	37	10	85997363	85997363	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	85997363	85997363	G	A	SNP	LRIT1	ENST00000372105	human	ensembl	74_37	-1	known	missense	c.202	p.R68W	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRIT1	HGNC	ENSG00000148602				67	0	0	38	12	24
RGR	0	genome.wustl.edu	37	10	86017717	86017717	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	86017717	86017717	C	T	SNP	RGR	ENST00000359452	human	ensembl	74_37	+1	known	silent	c.711	p.Y237	0.488	pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_RPE_GPCR,prints_GPCR_Rhodpsn	-	no_errors	RGR	HGNC	ENSG00000148604				72	0	0	39	21	35
LARP4B	0	genome.wustl.edu	37	10	871770	871770	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	871770	871770	G	A	SNP	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	missense	c.1166	p.T389M	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				32	0	0	23	2	8
RNLS	0	genome.wustl.edu	37	10	90342924	90342924	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	90342924	90342924	G	A	SNP	RNLS	ENST00000331772	human	ensembl	74_37	-1	known	silent	c.24	p.G8	1.000	NULL	pfam_Amino_oxidase	-	no_errors	RNLS	HGNC	ENSG00000184719				51	0	0	55	21	27.6316
HECTD2	0	genome.wustl.edu	37	10	93244943	93244943	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	93244943	93244943	C	T	SNP	HECTD2	ENST00000446394	human	ensembl	74_37	+1	known	missense	c.989	p.A330V	1.000	NULL	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	-	no_errors	HECTD2	HGNC	ENSG00000165338				36	0	0	49	12	19.6721
MYOF	0	genome.wustl.edu	37	10	95116503	95116503	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	95116503	95116503	G	A	SNP	MYOF	ENST00000359263	human	ensembl	74_37	-1	known	missense	c.3223	p.R1075C	1.000	smart_Peroxin/Ferlin	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	MYOF	HGNC	ENSG00000138119				64	0	0	52	14	21.2121
ALDH18A1	0	genome.wustl.edu	37	10	97402837	97402837	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	97402837	97402837	C	A	SNP	ALDH18A1	ENST00000371224	human	ensembl	74_37	-1	known	missense	c.215	p.R72I	1.000	pfam_Asp/Glu/Uridylate_kinase,superfamily_Asp/Glu/Uridylate_kinase,pirsf_P5_carboxy_syn,tigrfam_P5_carboxy_syn	pfam_Asp/Glu/Uridylate_kinase,pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,superfamily_Asp/Glu/Uridylate_kinase,pirsf_P5_carboxy_syn,prints_Glu/AcGlu_kinase,tigrfam_P5_carboxy_syn,tigrfam_G-glutamylP_reductase	-	no_errors	ALDH18A1	HGNC	ENSG00000059573				98	0	0	65	24	26.9663
BLNK	0	genome.wustl.edu	37	10	97987266	97987266	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	97987266	97987266	G	A	SNP	BLNK	ENST00000224337	human	ensembl	74_37	-1	known	silent	c.261	p.P87	0.001	NULL	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	BLNK	HGNC	ENSG00000095585				135	0	0	93	30	24.3902
PIK3AP1	0	genome.wustl.edu	37	10	98355339	98355339	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	98355339	98355339	G	A	SNP	PIK3AP1	ENST00000339364	human	ensembl	74_37	-1	known	missense	c.2413	p.R805C	1.000	NULL	superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PIK3AP1	HGNC	ENSG00000155629				53	0	0	53	20	27.3973
MMS19	0	genome.wustl.edu	37	10	99237151	99237151	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	99237151	99237151	T	C	SNP	MMS19	ENST00000370782	human	ensembl	74_37	-1	known	missense	c.446	p.H149R	1.000	superfamily_ARM-type_fold	pfam_Tscrpt_C,superfamily_ARM-type_fold	-	no_errors	MMS19	HGNC	ENSG00000155229				71	0	0	68	18	20.9302
DYNC2H1	0	genome.wustl.edu	37	11	103048395	103048395	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	103048395	103048395	G	A	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	silent	c.5985	p.A1995	0.814	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240				40	0	0	40	20	33.3333
CARD16	0	genome.wustl.edu	37	11	104912364	104912364	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	104912364	104912364	G	A	SNP	CARD16	ENST00000375706	human	ensembl	74_37	-1	known	silent	c.357	p.D119	0.000	NULL	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pfscan_CARD	-	no_errors	CARD16	HGNC	ENSG00000204397				49	0	0	56	16	22.2222
AMPD3	0	genome.wustl.edu	37	11	10521642	10521642	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	10521642	10521642	T	C	SNP	AMPD3	ENST00000396553	human	ensembl	74_37	+1	known	missense	c.1567	p.F523L	1.000	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD3	HGNC	ENSG00000133805				81	0	0	38	13	25.4902
AASDHPPT	0	genome.wustl.edu	37	11	105967614	105967614	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	105967614	105967614	C	T	SNP	AASDHPPT	ENST00000278618	human	ensembl	74_37	+1	known	nonsense	c.910	p.R304*	0.637	NULL	pfam_4-PPantetheinyl_Trfase_SF,superfamily_4-PPantetheinyl_Trfase_SF	-	no_errors	AASDHPPT	HGNC	ENSG00000149313				34	0	0	24	7	22.5806
SLN	0	genome.wustl.edu	37	11	107578563	107578563	+	Nonstop_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	107578563	107578563	A	G	SNP	SLN	ENST00000305991	human	ensembl	74_37	-1	known	nonstop	c.94	p.*32R	1.000	NULL	pfam_Sarcolipin	-	no_errors	SLN	HGNC	ENSG00000170290				64	0	0	44	12	21.4286
CTR9	0	genome.wustl.edu	37	11	10786257	10786257	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	10786257	10786257	G	A	SNP	CTR9	ENST00000361367	human	ensembl	74_37	+1	known	missense	c.1576	p.E526K	1.000	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CTR9	HGNC	ENSG00000198730				11	0	0	18	7	28
EXPH5	0	genome.wustl.edu	37	11	108381031	108381031	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	108381031	108381031	T	C	SNP	EXPH5	ENST00000265843	human	ensembl	74_37	-1	known	missense	c.5203	p.I1735V	0.004	NULL	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	EXPH5	HGNC	ENSG00000110723				82	0	0	76	18	19.1489
MUC2	0	genome.wustl.edu	37	11	1096474	1096474	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	1096474	1096474	C	T	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.6499	p.P2167S	0.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				127	0	0	63	18	22.2222
NNMT	0	genome.wustl.edu	37	11	114168764	114168764	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	114168764	114168764	C	T	SNP	NNMT	ENST00000299964	human	ensembl	74_37	+1	known	silent	c.246	p.V82	0.000	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	NNMT	HGNC	ENSG00000166741				98	0	0	82	18	18
REXO2	0	genome.wustl.edu	37	11	114320764	114320764	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	114320764	114320764	G	A	SNP	REXO2	ENST00000544507	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	REXO2	HGNC	ENSG00000076043				47	0	0	38	14	26.9231
GALNT18	0	genome.wustl.edu	37	11	11454168	11454168	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	11454168	11454168	C	T	SNP	GALNT18	ENST00000227756	human	ensembl	74_37	-1	known	missense	c.595	p.E199K	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT18	HGNC	ENSG00000110328				12	0	0	11	6	35.2941
CEP164	0	genome.wustl.edu	37	11	117280388	117280388	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	117280388	117280388	T	G	SNP	CEP164	ENST00000278935	human	ensembl	74_37	+1	known	missense	c.3803	p.L1268R	0.994	NULL	superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	CEP164	HGNC	ENSG00000110274				249	0	0	206	73	26.1649
CEP164	0	genome.wustl.edu	37	11	117280532	117280532	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	117280532	117280532	G	A	SNP	CEP164	ENST00000278935	human	ensembl	74_37	+1	known	missense	c.3947	p.G1316D	0.047	NULL	superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	CEP164	HGNC	ENSG00000110274				162	0	0	105	40	27.5862
TMPRSS13	0	genome.wustl.edu	37	11	117789217	117789217	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	117789217	117789217	A	G	SNP	TMPRSS13	ENST00000445164	human	ensembl	74_37	-1	known	missense	c.358	p.Y120H	0.000	pirsf_Peptidase_S1A_TMPRSS13	pirsf_Peptidase_S1A_TMPRSS13,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_SRCR,pfscan_Peptidase_S1	-	no_errors	TMPRSS13	HGNC	ENSG00000137747				47	0	0	37	11	22.9167
PHLDB1	0	genome.wustl.edu	37	11	118498395	118498395	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	118498395	118498395	C	A	SNP	PHLDB1	ENST00000361417	human	ensembl	74_37	+1	known	missense	c.856	p.P286T	1.000	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144				124	0	0	88	31	26.0504
UBASH3B	0	genome.wustl.edu	37	11	122650309	122650309	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	122650309	122650309	G	A	SNP	UBASH3B	ENST00000284273	human	ensembl	74_37	+1	known	silent	c.507	p.S169	1.000	superfamily_RNA_ligase/cNuc_Pdiesterase	pfam_His_Pase_superF_clade-1,pfam_SH3_domain,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_SH3_domain,superfamily_RNA_ligase/cNuc_Pdiesterase,smart_UBA/transl_elong_EF1B_N_euk,smart_SH3_domain,pfscan_SH3_domain,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBASH3B	HGNC	ENSG00000154127				128	0	0	80	22	21.5686
OR6X1	0	genome.wustl.edu	37	11	123624938	123624938	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	123624938	123624938	G	A	SNP	OR6X1	ENST00000327930	human	ensembl	74_37	-1	known	silent	c.289	p.L97	0.611	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6X1	HGNC	ENSG00000221931				69	0	0	61	13	17.5676
OR8D1	0	genome.wustl.edu	37	11	124180241	124180241	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	124180241	124180241	C	T	SNP	OR8D1	ENST00000357821	human	ensembl	74_37	-1	known	missense	c.422	p.C141Y	0.724	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8D1	HGNC	ENSG00000196341				44	0	0	41	13	24.0741
SRPR	0	genome.wustl.edu	37	11	126136163	126136163	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	126136163	126136163	G	T	SNP	SRPR	ENST00000332118	human	ensembl	74_37	-1	known	missense	c.851	p.T284N	0.998	pfam_Sig_recog_particle_rcpt_asu_N	pfam_Sig_recog_particle_rcpt_asu_N,pfam_SRP54_GTPase_dom,pfam_ArgK,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_Signal_recog_particl_SRP54_hlx,superfamily_Longin-like_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom	-	no_errors	SRPR	HGNC	ENSG00000182934				148	0	0	100	31	23.6641
KIRREL3	0	genome.wustl.edu	37	11	126391268	126391268	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	126391268	126391268	G	A	SNP	KIRREL3	ENST00000525144	human	ensembl	74_37	-1	known	silent	c.375	p.Y125	0.979	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL3	HGNC	ENSG00000149571				11	0	0	6	4	40
MUC5B	0	genome.wustl.edu	37	11	1265115	1265115	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	1265115	1265115	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.7014	p.G2338	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				71	0	0	35	8	18.6047
FLI1	0	genome.wustl.edu	37	11	128680622	128680622	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	128680622	128680622	C	T	SNP	FLI1	ENST00000527786	human	ensembl	74_37	+1	known	silent	c.1098	p.A366	1.000	NULL	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	FLI1	HGNC	ENSG00000151702				54	0	0	48	12	20
ARHGAP32	0	genome.wustl.edu	37	11	128840872	128840872	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	128840872	128840872	G	A	SNP	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	silent	c.4194	p.R1398	0.001	NULL	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909				61	0	0	58	9	13.4328
NFRKB	0	genome.wustl.edu	37	11	129743689	129743689	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	129743689	129743689	G	A	SNP	NFRKB	ENST00000524794	human	ensembl	74_37	-1	known	missense	c.2576	p.P859L	0.975	NULL	NULL	-	no_errors	NFRKB	HGNC	ENSG00000170322				139	0	0	90	28	23.7288
PRDM10	0	genome.wustl.edu	37	11	129814773	129814773	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	129814773	129814773	C	A	SNP	PRDM10	ENST00000358825	human	ensembl	74_37	-1	known	missense	c.655	p.G219C	0.999	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM10	HGNC	ENSG00000170325				90	0	0	100	26	20.6349
APLP2	0	genome.wustl.edu	37	11	129999046	129999046	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	129999046	129999046	G	A	SNP	APLP2	ENST00000263574	human	ensembl	74_37	+1	known	missense	c.1400	p.R467H	1.000	superfamily_Amyloid_glyco_E2_domain	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APLP2	HGNC	ENSG00000084234				129	0	0	83	31	27.193
ADAMTS15	0	genome.wustl.edu	37	11	130319789	130319789	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	130319789	130319789	C	T	SNP	ADAMTS15	ENST00000299164	human	ensembl	74_37	+1	known	silent	c.921	p.P307	0.001	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS,prints_Pept_M12B_ADAM-TS8	-	no_errors	ADAMTS15	HGNC	ENSG00000166106				69	0	0	44	19	30.1587
NTM	0	genome.wustl.edu	37	11	132184562	132184562	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	132184562	132184562	A	G	SNP	NTM	ENST00000539799	human	ensembl	74_37	+1	known	missense	c.899	p.K300R	0.808	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NTM	HGNC	ENSG00000182667				46	0	0	45	15	25
CALCA	0	genome.wustl.edu	37	11	14989262	14989262	+	Silent	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	14989262	14989262	G	T	SNP	CALCA	ENST00000361010	human	ensembl	74_37	-1	known	silent	c.366	p.R122	0.686	pfam_Procalcitonin/adrenomedullin,smart_Calcitonin_peptide-like,prints_Pro-islet_amyloid_polypep	pfam_Procalcitonin/adrenomedullin,smart_Calcitonin_peptide-like,prints_Calcitonin_gene-rel_peptide,prints_Pro-islet_amyloid_polypep	-	no_errors	CALCA	HGNC	ENSG00000110680				70	0	0	63	6	8.69565
PLEKHA7	0	genome.wustl.edu	37	11	16838609	16838609	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	16838609	16838609	C	T	SNP	PLEKHA7	ENST00000448080	human	ensembl	74_37	-1	known	missense	c.1604	p.G535D	1.000	NULL	pfam_Pleckstrin_homology,pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA7	HGNC	ENSG00000166689				91	0	0	63	19	23.1707
NUCB2	0	genome.wustl.edu	37	11	17332466	17332466	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	17332466	17332466	A	G	SNP	NUCB2	ENST00000323688	human	ensembl	74_37	+1	known	missense	c.578	p.K193R	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NUCB2	HGNC	ENSG00000070081				49	0	0	56	21	27.2727
ABCC8	0	genome.wustl.edu	37	11	17432160	17432160	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	17432160	17432160	T	C	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.2600	p.H867R	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071				114	0	0	95	28	22.7642
SAA4	0	genome.wustl.edu	37	11	18253958	18253958	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	18253958	18253958	C	T	SNP	SAA4	ENST00000278222	human	ensembl	74_37	-1	known	missense	c.214	p.A72T	1.000	pfam_Serum_amyloid_A,superfamily_Actin_cross-linking,smart_Serum_amyloid_A,pirsf_Serum_amyloid_A,prints_Serum_amyloid_A	pfam_Serum_amyloid_A,superfamily_Actin_cross-linking,smart_Serum_amyloid_A,pirsf_Serum_amyloid_A,prints_Serum_amyloid_A	-	no_errors	SAA4	HGNC	ENSG00000148965				176	0	0	156	42	21.2121
MRGPRX1	0	genome.wustl.edu	37	11	18955874	18955874	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	18955874	18955874	C	T	SNP	MRGPRX1	ENST00000302797	human	ensembl	74_37	-1	known	missense	c.458	p.R153Q	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRX1	HGNC	ENSG00000170255				93	0	0	61	24	28.2353
NELL1	0	genome.wustl.edu	37	11	20691304	20691304	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	20691304	20691304	G	C	SNP	NELL1	ENST00000357134	human	ensembl	74_37	+1	known	missense	c.35	p.C12S	0.668	NULL	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL1	HGNC	ENSG00000165973				58	0	0	47	13	21.6667
CD81	0	genome.wustl.edu	37	11	2417910	2417910	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	2417910	2417910	T	A	SNP	CD81	ENST00000263645	human	ensembl	74_37	+1	known	missense	c.614	p.I205N	0.994	pfam_Tetraspanin/Peripherin,prints_Tetraspanin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	CD81	HGNC	ENSG00000110651				160	0	0	107	39	26.7123
ATHL1	0	genome.wustl.edu	37	11	292902	292902	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	292902	292902	G	A	SNP	ATHL1	ENST00000409548	human	ensembl	74_37	+1	known	missense	c.1175	p.R392Q	0.001	pfam_Glyco_hydro_65_M,superfamily_6-hairpin_glycosidase-like	pfam_Glyco_hydro_65_M,superfamily_6-hairpin_glycosidase-like	-	no_errors	ATHL1	HGNC	ENSG00000142102				52	0	0	28	11	28.2051
KCNA4	0	genome.wustl.edu	37	11	30034022	30034022	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	30034022	30034022	G	A	SNP	KCNA4	ENST00000328224	human	ensembl	74_37	-1	known	silent	c.204	p.R68	0.506	pfam_K_chnl_volt-dep_Kv1.4_TID	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255				96	0	0	63	27	30
IMMP1L	0	genome.wustl.edu	37	11	31477838	31477838	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	31477838	31477838	C	A	SNP	IMMP1L	ENST00000278200	human	ensembl	74_37	-1	known	missense	c.290	p.S97I	0.776	pfam_Peptidase_S24_S26,superfamily_Peptidase_S24_S26A/B/C	pfam_Peptidase_S24_S26,superfamily_Peptidase_S24_S26A/B/C,prints_Pept_S26A_signal_pept_1,tigrfam_Pept_S26A_signal_pept_1	-	no_errors	IMMP1L	HGNC	ENSG00000148950				20	0	0	15	5	25
CSTF3	0	genome.wustl.edu	37	11	33106722	33106722	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	33106722	33106722	C	T	SNP	CSTF3	ENST00000323959	human	ensembl	74_37	-1	known	missense	c.2065	p.E689K	1.000	NULL	pfam_Suf,smart_HAT	-	no_errors	CSTF3	HGNC	ENSG00000176102				52	0	0	40	13	24.5283
HIPK3	0	genome.wustl.edu	37	11	33370344	33370344	+	Silent	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	33370344	33370344	C	A	SNP	HIPK3	ENST00000303296	human	ensembl	74_37	+1	known	silent	c.2646	p.S882	0.113	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK3	HGNC	ENSG00000110422				58	0	0	57	15	20.8333
B4GALNT4	0	genome.wustl.edu	37	11	375712	375712	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	375712	375712	G	A	SNP	B4GALNT4	ENST00000329962	human	ensembl	74_37	+1	known	silent	c.924	p.P308	0.000	NULL	pfam_Chond_GalNAc,pfam_PA14,smart_PA14	-	no_errors	B4GALNT4	HGNC	ENSG00000182272				68	0	0	40	21	34.4262
B4GALNT4	0	genome.wustl.edu	37	11	379925	379925	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	379925	379925	C	T	SNP	B4GALNT4	ENST00000329962	human	ensembl	74_37	+1	known	missense	c.2548	p.R850C	0.012	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_PA14,smart_PA14	-	no_errors	B4GALNT4	HGNC	ENSG00000182272				56	0	0	30	9	23.0769
EXT2	0	genome.wustl.edu	37	11	44219525	44219525	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	44219525	44219525	A	G	SNP	EXT2	ENST00000395673	human	ensembl	74_37	+1	known	silent	c.1551	p.K517	1.000	pfam_HexNAc_Trfase_a	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXT2	HGNC	ENSG00000151348				95	0	0	76	19	20
TP53I11	0	genome.wustl.edu	37	11	44959882	44959882	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	44959882	44959882	G	A	SNP	TP53I11	ENST00000354556	human	ensembl	74_37	-1	known	missense	c.5	p.A2V	1.000	NULL	NULL	-	no_errors	TP53I11	HGNC	ENSG00000175274				15	0	0	11	7	38.8889
OR52I1	0	genome.wustl.edu	37	11	4615541	4615541	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	4615541	4615541	G	A	SNP	OR52I1	ENST00000530443	human	ensembl	74_37	+1	known	silent	c.273	p.S91	0.181	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52I1	HGNC	ENSG00000232268				163	0	0	100	35	25.9259
LRP4	0	genome.wustl.edu	37	11	46900582	46900582	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	46900582	46900582	T	C	SNP	LRP4	ENST00000378623	human	ensembl	74_37	-1	known	silent	c.3012	p.T1004	0.993	NULL	pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP4	HGNC	ENSG00000134569				253	0	0	203	61	23.1061
DDB2	0	genome.wustl.edu	37	11	47256210	47256210	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	47256210	47256210	T	C	SNP	DDB2	ENST00000256996	human	ensembl	74_37	+1	known	missense	c.689	p.M230T	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DDB2	HGNC	ENSG00000134574				100	0	0	66	34	34
TRIM49B	0	genome.wustl.edu	37	11	49055893	49055893	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	49055893	49055893	G	A	SNP	TRIM49B	ENST00000332682	human	ensembl	74_37	+1	known	missense	c.703	p.E235K	0.001	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM49B	HGNC	ENSG00000182053				123	0	0	125	31	19.8718
FOLH1	0	genome.wustl.edu	37	11	49204780	49204780	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	49204780	49204780	G	A	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	missense	c.841	p.R281C	0.990	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205				54	0	0	63	4	5.97015
OR5D14	0	genome.wustl.edu	37	11	55563738	55563738	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	55563738	55563738	G	A	SNP	OR5D14	ENST00000335605	human	ensembl	74_37	+1	known	missense	c.707	p.R236H	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC	ENSG00000186113				87	0	0	84	27	24.3243
OR5F1	0	genome.wustl.edu	37	11	55761382	55761382	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	55761382	55761382	C	T	SNP	OR5F1	ENST00000278409	human	ensembl	74_37	-1	known	silent	c.720	p.T240	0.065	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5F1	HGNC	ENSG00000149133				74	0	0	57	23	28.75
TRIM6-TRIM34	0	genome.wustl.edu	37	11	5624931	5624931	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	5624931	5624931	C	T	SNP	TRIM6-TRIM34	ENST00000354852	human	ensembl	74_37	+1	known	missense	c.473	p.T158M	0.894	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM6-TRIM34	HGNC	ENSG00000258588				92	0	0	98	30	23.4375
OR1S1	0	genome.wustl.edu	37	11	57983027	57983027	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	57983027	57983027	G	A	SNP	OR1S1	ENST00000309433	human	ensembl	74_37	+1	known	missense	c.811	p.V271M	0.002	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1S1	HGNC	ENSG00000172774				89	0	0	58	19	24.6753
OR5B12	0	genome.wustl.edu	37	11	58207416	58207416	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	58207416	58207416	C	T	SNP	OR5B12	ENST00000302572	human	ensembl	74_37	-1	known	missense	c.209	p.G70D	0.017	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR5B12	HGNC	ENSG00000172362				54	0	0	58	21	26.5823
OR52N2	0	genome.wustl.edu	37	11	5841962	5841962	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	5841962	5841962	C	T	SNP	OR52N2	ENST00000317037	human	ensembl	74_37	+1	known	missense	c.397	p.R133C	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52N2	HGNC	ENSG00000180988				103	0	0	96	41	29.927
MS4A6E	0	genome.wustl.edu	37	11	60105316	60105316	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	60105316	60105316	C	T	SNP	MS4A6E	ENST00000300182	human	ensembl	74_37	+1	known	nonsense	c.250	p.Q84*	0.002	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A6E	HGNC	ENSG00000166926				105	0	0	75	30	28.5714
SYT7	0	genome.wustl.edu	37	11	61295633	61295633	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	61295633	61295633	C	T	SNP	SYT7	ENST00000263846	human	ensembl	74_37	-1	known	missense	c.376	p.E126K	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT7	HGNC	ENSG00000011347				85	0	0	59	16	21.3333
FADS1	0	genome.wustl.edu	37	11	61584071	61584071	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	61584071	61584071	C	A	SNP	FADS1	ENST00000350997	human	ensembl	74_37	-1	known	missense	c.331	p.G111W	1.000	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Fatty_acid/sphinglp_desaturase,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	pfam_Fatty_acid_desaturase-1,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Fatty_acid/sphinglp_desaturase,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	FADS1	HGNC	ENSG00000149485				21	0	0	10	5	33.3333
C11orf42	0	genome.wustl.edu	37	11	6231118	6231118	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	6231118	6231118	A	G	SNP	C11orf42	ENST00000316375	human	ensembl	74_37	+1	known	silent	c.111	p.V37	0.825	NULL	NULL	-	no_errors	C11orf42	HGNC	ENSG00000180878				134	0	0	107	32	23.0216
FAM160A2	0	genome.wustl.edu	37	11	6232863	6232863	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	6232863	6232863	A	G	SNP	FAM160A2	ENST00000265978	human	ensembl	74_37	-1	known	missense	c.2834	p.F945S	1.000	NULL	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160A2	HGNC	ENSG00000051009				139	0	0	110	44	28.5714
LRRN4CL	0	genome.wustl.edu	37	11	62455497	62455497	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	62455497	62455497	T	G	SNP	LRRN4CL	ENST00000317449	human	ensembl	74_37	-1	known	missense	c.484	p.S162R	0.153	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LRRN4CL	HGNC	ENSG00000177363				37	0	0	42	14	25
TAF6L	0	genome.wustl.edu	37	11	62545464	62545464	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	62545464	62545464	C	T	SNP	TAF6L	ENST00000294168	human	ensembl	74_37	+1	known	silent	c.249	p.Y83	0.984	NULL	pfam_TAF_TATA-bd,pfam_DUF1546,superfamily_Histone-fold,smart_TAF_TATA-bd	-	no_errors	TAF6L	HGNC	ENSG00000162227				79	0	0	52	20	27.7778
RARRES3	0	genome.wustl.edu	37	11	63312430	63312430	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	63312430	63312430	C	T	SNP	RARRES3	ENST00000439013	human	ensembl	74_37	+1	putative	silent	c.456	p.G152	0.001	NULL	pfam_LRAT-like_dom	-	no_errors	RARRES3	HGNC	ENSG00000133321				85	0	0	52	18	25.7143
SLC22A11	0	genome.wustl.edu	37	11	64323838	64323838	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	64323838	64323838	G	A	SNP	SLC22A11	ENST00000301891	human	ensembl	74_37	+1	known	missense	c.367	p.V123I	0.000	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A11	HGNC	ENSG00000168065				69	0	0	33	16	32.6531
DEAF1	0	genome.wustl.edu	37	11	644595	644595	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	644595	644595	G	A	SNP	DEAF1	ENST00000382409	human	ensembl	74_37	-1	known	silent	c.1653	p.D551	0.846	NULL	pfam_SAND_dom,pfam_Znf_MYND,superfamily_SAND_dom-like,smart_SAND_dom,pfscan_Znf_MYND,pfscan_SAND_dom	-	no_errors	DEAF1	HGNC	ENSG00000177030				32	0	0	27	7	20.5882
ATG2A	0	genome.wustl.edu	37	11	64674254	64674254	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	64674254	64674254	C	T	SNP	ATG2A	ENST00000421419	human	ensembl	74_37	-1	known	missense	c.2866	p.G956R	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2A	HGNC	ENSG00000110046				48	0	0	29	12	29.2683
NAALADL1	0	genome.wustl.edu	37	11	64812884	64812884	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	64812884	64812884	C	T	SNP	NAALADL1	ENST00000358658	human	ensembl	74_37	-1	known	silent	c.2082	p.P694	0.010	pfam_TFR-like_dimer_dom,superfamily_TFR-like_dimer_dom	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL1	HGNC	ENSG00000168060				32	0	0	27	5	15.625
FRMD8	0	genome.wustl.edu	37	11	65161804	65161804	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	65161804	65161804	C	T	SNP	FRMD8	ENST00000317568	human	ensembl	74_37	+1	known	silent	c.489	p.C163	0.797	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD8	HGNC	ENSG00000126391				12	0	0	13	3	18.75
SIPA1	0	genome.wustl.edu	37	11	65409844	65409844	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	65409844	65409844	C	T	SNP	SIPA1	ENST00000394224	human	ensembl	74_37	+1	known	missense	c.803	p.T268M	0.855	NULL	pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1	HGNC	ENSG00000213445				16	0	0	11	5	31.25
MUS81	0	genome.wustl.edu	37	11	65629934	65629934	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	65629934	65629934	G	A	SNP	MUS81	ENST00000308110	human	ensembl	74_37	+1	known	missense	c.539	p.R180Q	0.000	NULL	pfam_ERCC4_domain,superfamily_Restrct_endonuc-II-like,superfamily_DNA_pol_b-like_N,smart_ERCC4_domain	-	no_errors	MUS81	HGNC	ENSG00000172732				142	0	0	91	42	31.5789
FIBP	0	genome.wustl.edu	37	11	65653100	65653100	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	65653100	65653100	G	A	SNP	FIBP	ENST00000338369	human	ensembl	74_37	-1	known	missense	c.547	p.R183C	1.000	pfam_FIBP	pfam_FIBP	-	no_errors	FIBP	HGNC	ENSG00000172500				152	0	0	103	36	25.8993
SF3B2	0	genome.wustl.edu	37	11	65822776	65822776	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	65822776	65822776	G	A	SNP	SF3B2	ENST00000322535	human	ensembl	74_37	+1	known	missense	c.488	p.R163H	0.954	NULL	pfam_DUF382,pfam_PSP,pfam_SAP_dom,smart_SAP_dom,smart_PSP,pfscan_SAP_dom	-	no_errors	SF3B2	HGNC	ENSG00000087365				29	0	0	34	9	20.9302
RBM4B	0	genome.wustl.edu	37	11	66436260	66436260	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	66436260	66436260	T	C	SNP	RBM4B	ENST00000310046	human	ensembl	74_37	-1	known	silent	c.915	p.P305	0.966	NULL	pfam_RRM_dom,pfam_Znf_CCHC,smart_RRM_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_RRM_dom	-	no_errors	RBM4B	HGNC	ENSG00000173914				89	0	0	70	22	23.913
PC	0	genome.wustl.edu	37	11	66633741	66633741	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	66633741	66633741	G	A	SNP	PC	ENST00000393958	human	ensembl	74_37	-1	known	missense	c.1102	p.R368C	1.000	pirsf_Pyruv_COase,pfscan_Biotin_carboxylation_dom,tigrfam_Pyruv_COase	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_Carboxylase_cons_dom,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_PYR_CT,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pirsf_Pyruv_COase,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_PYR_CT,pfscan_Biotin_lipoyl,tigrfam_Pyruv_COase	-	no_errors	PC	HGNC	ENSG00000173599				53	0	0	38	18	32.1429
CABP4	0	genome.wustl.edu	37	11	67222963	67222963	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	67222963	67222963	G	A	SNP	CABP4	ENST00000325656	human	ensembl	74_37	+1	known	silent	c.69	p.A23	0.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP4	HGNC	ENSG00000175544				15	0	0	13	4	23.5294
CABP2	0	genome.wustl.edu	37	11	67287369	67287369	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	67287369	67287369	G	A	SNP	CABP2	ENST00000294288	human	ensembl	74_37	-1	known	missense	c.532	p.R178W	1.000	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP2	HGNC	ENSG00000167791				51	0	0	37	13	26
C11orf24	0	genome.wustl.edu	37	11	68029129	68029129	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	68029129	68029129	G	A	SNP	C11orf24	ENST00000304271	human	ensembl	74_37	-1	known	missense	c.1334	p.A445V	0.958	NULL	NULL	-	no_errors	C11orf24	HGNC	ENSG00000171067				66	0	0	50	26	34.2105
SHANK2	0	genome.wustl.edu	37	11	70331881	70331881	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	70331881	70331881	G	A	SNP	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	missense	c.4520	p.T1507M	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105				76	0	0	46	18	28.125
KRTAP5-10	0	genome.wustl.edu	37	11	71276883	71276883	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	71276883	71276883	T	C	SNP	KRTAP5-10	ENST00000398531	human	ensembl	74_37	+1	known	missense	c.250	p.C84R	0.995	NULL	NULL	-	no_errors	KRTAP5-10	HGNC	ENSG00000204572				247	0	0	216	52	19.403
ARAP1	0	genome.wustl.edu	37	11	72423290	72423290	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	72423290	72423290	C	T	SNP	ARAP1	ENST00000393609	human	ensembl	74_37	-1	known	missense	c.973	p.V325I	0.000	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_Ras-assoc,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP1	HGNC	ENSG00000186635				48	0	0	38	13	25.4902
ARAP1	0	genome.wustl.edu	37	11	72425227	72425227	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	72425227	72425227	G	A	SNP	ARAP1	ENST00000393609	human	ensembl	74_37	-1	known	missense	c.649	p.P217S	0.851	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_Ras-assoc,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP1	HGNC	ENSG00000186635				8	0	0	8	4	33.3333
P4HA3	0	genome.wustl.edu	37	11	73997331	73997331	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	73997331	73997331	A	G	SNP	P4HA3	ENST00000331597	human	ensembl	74_37	-1	known	missense	c.875	p.I292T	0.544	NULL	pfam_Pro_4_hyd_alph_N,pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	P4HA3	HGNC	ENSG00000149380				199	0	0	190	56	22.7642
ARRB1	0	genome.wustl.edu	37	11	74989778	74989778	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	74989778	74989778	G	A	SNP	ARRB1	ENST00000393505	human	ensembl	74_37	-1	known	missense	c.493	p.R165C	1.000	pfam_Arrestin-like_N,superfamily_Ig_E-set,prints_Arrestin	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set,prints_Arrestin	-	no_errors	ARRB1	HGNC	ENSG00000137486				144	0	0	103	36	25.8993
LRRC32	0	genome.wustl.edu	37	11	76371445	76371445	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	76371445	76371445	G	T	SNP	LRRC32	ENST00000260061	human	ensembl	74_37	-1	known	missense	c.1192	p.L398M	0.928	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC32	HGNC	ENSG00000137507				36	0	0	24	5	17.2414
CAPN5	0	genome.wustl.edu	37	11	76830130	76830130	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	76830130	76830130	C	T	SNP	CAPN5	ENST00000278559	human	ensembl	74_37	+1	known	missense	c.1222	p.R408W	1.000	pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Calpain_III	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN5	HGNC	ENSG00000149260				24	0	0	18	3	14.2857
DLG2	0	genome.wustl.edu	37	11	83344258	83344258	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	83344258	83344258	C	T	SNP	DLG2	ENST00000376104	human	ensembl	74_37	-1	known	missense	c.1936	p.V646I	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pirsf_M-assoc_guanylate_kinase,pfscan_SH3_domain	pfam_PDZ,pfam_GK/Ca_channel_bsu,pfam_MAGUK_PEST_N,pfam_PDZ_assoc,pfam_L27_1,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG2	HGNC	ENSG00000150672				45	0	0	43	6	12.2449
DENND5A	0	genome.wustl.edu	37	11	9225343	9225343	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	9225343	9225343	G	A	SNP	DENND5A	ENST00000328194	human	ensembl	74_37	-1	known	silent	c.813	p.C271	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_Run,pfam_uDENN_dom,pfam_dDENN_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_Run,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_PLAT/LH2_dom,pfscan_Run	-	no_errors	DENND5A	HGNC	ENSG00000184014				105	0	0	94	30	24.1935
MTNR1B	0	genome.wustl.edu	37	11	92702912	92702912	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	92702912	92702912	C	T	SNP	MTNR1B	ENST00000257068	human	ensembl	74_37	+1	known	silent	c.21	p.F7	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Melatonin_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Mel_1A_rcpt	-	no_errors	MTNR1B	HGNC	ENSG00000134640				27	0	0	25	11	30.5556
ANKRD49	0	genome.wustl.edu	37	11	94231382	94231382	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	94231382	94231382	A	G	SNP	ANKRD49	ENST00000302755	human	ensembl	74_37	+1	known	missense	c.404	p.H135R	0.988	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD49	HGNC	ENSG00000168876				82	0	0	72	18	20
ENDOD1	0	genome.wustl.edu	37	11	94862364	94862364	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	94862364	94862364	G	A	SNP	ENDOD1	ENST00000278505	human	ensembl	74_37	+1	known	missense	c.1124	p.C375Y	0.110	NULL	pfam_DNA/RNA_non-sp_Endonuclease,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A	-	no_errors	ENDOD1	HGNC	ENSG00000149218				77	0	0	75	21	21.875
MAML2	0	genome.wustl.edu	37	11	95825410	95825410	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	95825410	95825410	C	T	SNP	MAML2	ENST00000524717	human	ensembl	74_37	-1	known	silent	c.1785	p.Q595	0.002	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC	ENSG00000184384				13	0	0	6	3	33.3333
SLC17A8	0	genome.wustl.edu	37	12	100806649	100806649	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	100806649	100806649	G	A	SNP	SLC17A8	ENST00000323346	human	ensembl	74_37	+1	known	missense	c.1288	p.A430T	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A8	HGNC	ENSG00000179520				82	0	0	76	27	26.2136
ANO4	0	genome.wustl.edu	37	12	101381385	101381385	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	101381385	101381385	C	T	SNP	ANO4	ENST00000392977	human	ensembl	74_37	+1	known	missense	c.671	p.T224I	1.000	NULL	pfam_Anoctamin	-	no_errors	ANO4	HGNC	ENSG00000151572				249	0	0	190	75	28.3019
UTP20	0	genome.wustl.edu	37	12	101685882	101685882	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	101685882	101685882	A	G	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	silent	c.1173	p.K391	1.000	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800				55	0	0	50	15	23.0769
UTP20	0	genome.wustl.edu	37	12	101764871	101764871	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	101764871	101764871	C	T	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	silent	c.6723	p.I2241	0.722	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800				88	0	0	90	23	20.354
GNPTAB	0	genome.wustl.edu	37	12	102158268	102158268	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	102158268	102158268	G	A	SNP	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	silent	c.2427	p.D809	0.000	pfam_DMAP1-bd	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670				103	0	0	101	28	21.7054
UBE3B	0	genome.wustl.edu	37	12	109972426	109972426	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	109972426	109972426	C	T	SNP	UBE3B	ENST00000342494	human	ensembl	74_37	+1	known	missense	c.3046	p.R1016W	0.958	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_IQ_motif_EF-hand-BS,superfamily_HECT,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3B	HGNC	ENSG00000151148				75	0	0	55	25	31.25
HECTD4	0	genome.wustl.edu	37	12	112681278	112681278	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	112681278	112681278	G	A	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.4321	p.R1441W	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064				28	0	0	23	9	28.125
RASAL1	0	genome.wustl.edu	37	12	113542071	113542071	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	113542071	113542071	G	A	SNP	RASAL1	ENST00000546530	human	ensembl	74_37	-1	known	silent	c.1866	p.R622	0.955	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RasGAP,pfam_C2_dom,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_C2_dom,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP	-	no_errors	RASAL1	HGNC	ENSG00000111344				11	0	0	7	5	41.6667
TBX5	0	genome.wustl.edu	37	12	114793463	114793463	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	114793463	114793463	C	T	SNP	TBX5	ENST00000310346	human	ensembl	74_37	-1	known	silent	c.1431	p.Q477	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX5	HGNC	ENSG00000089225				55	0	0	67	17	20.2381
FBXO21	0	genome.wustl.edu	37	12	117593747	117593747	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	117593747	117593747	G	A	SNP	FBXO21	ENST00000330622	human	ensembl	74_37	-1	known	silent	c.1545	p.G515	1.000	pfam_Hemimethylated_DNA-bd_dom,superfamily_Hemimethylated_DNA-bd_dom,superfamily_F-box_dom,tigrfam_Hemimethylated_DNA-bd_dom	pfam_Hemimethylated_DNA-bd_dom,superfamily_Hemimethylated_DNA-bd_dom,superfamily_F-box_dom,tigrfam_Hemimethylated_DNA-bd_dom	-	no_errors	FBXO21	HGNC	ENSG00000135108				91	0	0	57	14	19.7183
GCN1L1	0	genome.wustl.edu	37	12	120576551	120576551	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	120576551	120576551	G	T	SNP	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	missense	c.6104	p.T2035N	1.000	superfamily_ARM-type_fold,pfscan_HEAT_type_2	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154				216	0	0	147	46	23.8342
GCN1L1	0	genome.wustl.edu	37	12	120591163	120591163	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	120591163	120591163	C	T	SNP	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	missense	c.3916	p.A1306T	1.000	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154				39	0	0	31	11	26.1905
KDM2B	0	genome.wustl.edu	37	12	121970820	121970820	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	121970820	121970820	G	A	SNP	KDM2B	ENST00000377071	human	ensembl	74_37	-1	known	silent	c.822	p.Y274	0.390	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_Znf_CXXC,pfam_F-box_dom,pfam_JmjC_dom,superfamily_Znf_FYVE_PHD,smart_JmjC_dom,smart_Znf_PHD,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KDM2B	HGNC	ENSG00000089094				65	0	0	66	18	21.4286
CLIP1	0	genome.wustl.edu	37	12	122801333	122801333	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	122801333	122801333	C	A	SNP	CLIP1	ENST00000540338	human	ensembl	74_37	-1	known	missense	c.3436	p.V1146L	0.128	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Znf_CCHC,superfamily_Prefoldin,pfscan_CAP-Gly_domain	-	no_errors	CLIP1	HGNC	ENSG00000130779				14	0	0	7	2	22.2222
DDX55	0	genome.wustl.edu	37	12	124094656	124094656	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	124094656	124094656	G	T	SNP	DDX55	ENST00000238146	human	ensembl	74_37	+1	known	missense	c.722	p.R241L	1.000	superfamily_P-loop_NTPase,smart_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX55	HGNC	ENSG00000111364				48	0	0	30	12	28.5714
DNAH10	0	genome.wustl.edu	37	12	124325980	124325980	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	124325980	124325980	C	T	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.4894	p.R1632W	0.105	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653				162	1	0.613497	146	48	24.7423
NCOR2	0	genome.wustl.edu	37	12	124911328	124911328	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	124911328	124911328	G	A	SNP	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	missense	c.1168	p.R390C	1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498				120	0	0	72	29	28.7129
FZD10	0	genome.wustl.edu	37	12	130648101	130648101	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	130648101	130648101	C	T	SNP	FZD10	ENST00000229030	human	ensembl	74_37	+1	known	missense	c.614	p.A205V	0.995	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD10	HGNC	ENSG00000111432				59	0	0	31	9	22.5
MMP17	0	genome.wustl.edu	37	12	132334499	132334499	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	132334499	132334499	C	T	SNP	MMP17	ENST00000360564	human	ensembl	74_37	+1	known	missense	c.1357	p.R453C	1.000	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	-	no_errors	MMP17	HGNC	ENSG00000198598				155	0	0	90	23	20.354
EP400	0	genome.wustl.edu	37	12	132445666	132445666	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	132445666	132445666	G	T	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	missense	c.502	p.G168W	0.944	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				19	0	0	16	5	23.8095
PXMP2	0	genome.wustl.edu	37	12	133281219	133281219	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	133281219	133281219	C	T	SNP	PXMP2	ENST00000545677	human	ensembl	74_37	+1	known	missense	c.148	p.R50C	1.000	NULL	NULL	-	no_errors	PXMP2	HGNC	ENSG00000176894				89	0	0	78	28	26.4151
CHFR	0	genome.wustl.edu	37	12	133419637	133419637	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	133419637	133419637	C	T	SNP	CHFR	ENST00000266880	human	ensembl	74_37	-1	known	missense	c.1909	p.G637S	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_Znf_RING,pfscan_FHA_dom,pfscan_Znf_RING	-	no_errors	CHFR	HGNC	ENSG00000072609				30	0	0	23	8	25.8065
GRIN2B	0	genome.wustl.edu	37	12	13720103	13720103	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	13720103	13720103	C	A	SNP	GRIN2B	ENST00000609686	human	ensembl	74_37	-1	known	missense	c.2454	p.M818I	1.000	pfam_Iontro_glu_rcpt,prints_NMDA_rcpt	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2B	HGNC	ENSG00000273079				104	0	0	72	29	28.7129
BCAT1	0	genome.wustl.edu	37	12	25047327	25047327	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	25047327	25047327	G	A	SNP	BCAT1	ENST00000261192	human	ensembl	74_37	-1	known	missense	c.161	p.T54M	0.999	superfamily_Aminotrans_IV,pirsf_B_amino_transII	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	-	no_errors	BCAT1	HGNC	ENSG00000060982				24	0	0	27	7	20.5882
IQSEC3	0	genome.wustl.edu	37	12	275010	275010	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	275010	275010	G	T	SNP	IQSEC3	ENST00000326261	human	ensembl	74_37	+1	known	missense	c.2925	p.K975N	1.000	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC3	HGNC	ENSG00000120645				64	0	0	54	7	11.4754
TMTC1	0	genome.wustl.edu	37	12	29659903	29659903	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	29659903	29659903	G	A	SNP	TMTC1	ENST00000256062	human	ensembl	74_37	-1	known	missense	c.2201	p.A734V	1.000	pfam_TPR_1,smart_TPR_repeat,smart_HAT,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687				99	0	0	99	29	22.6562
IPO8	0	genome.wustl.edu	37	12	30802093	30802093	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	30802093	30802093	C	T	SNP	IPO8	ENST00000256079	human	ensembl	74_37	-1	known	missense	c.2246	p.C749Y	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,pfam_Cse1,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO8	HGNC	ENSG00000133704				66	0	0	72	25	25.7732
DNM1L	0	genome.wustl.edu	37	12	32832281	32832281	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	32832281	32832281	C	T	SNP	DNM1L	ENST00000547932	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	DNM1L	HGNC	ENSG00000087470				21	0	0	21	10	32.2581
SYT10	0	genome.wustl.edu	37	12	33592379	33592379	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	33592379	33592379	C	T	SNP	SYT10	ENST00000228567	human	ensembl	74_37	-1	known	missense	c.79	p.G27S	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT10	HGNC	ENSG00000110975				172	0	0	155	43	21.7172
C12orf5	0	genome.wustl.edu	37	12	4461843	4461843	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	4461843	4461843	A	G	SNP	C12orf5	ENST00000179259	human	ensembl	74_37	+1	known	missense	c.799	p.T267A	0.000	NULL	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1	-	no_errors	C12orf5	HGNC	ENSG00000078237				34	0	0	35	8	18.6047
KCNA6	0	genome.wustl.edu	37	12	4920562	4920562	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	4920562	4920562	T	C	SNP	KCNA6	ENST00000280684	human	ensembl	74_37	+1	known	missense	c.1355	p.L452P	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.6,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA6	HGNC	ENSG00000151079				90	0	0	84	25	22.9358
KMT2D	0	genome.wustl.edu	37	12	49425085	49425085	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	49425085	49425085	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.13403	p.R4468Q	0.827	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				108	0	0	70	21	23.0769
TFCP2	0	genome.wustl.edu	37	12	51502902	51502902	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	51502902	51502902	A	G	SNP	TFCP2	ENST00000257915	human	ensembl	74_37	-1	known	splice_site	c.717+2	e6+2	1.000	-	-	-	no_errors	TFCP2	HGNC	ENSG00000135457				64	0	0	49	27	35.5263
CELA1	0	genome.wustl.edu	37	12	51723491	51723491	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	51723491	51723491	C	T	SNP	CELA1	ENST00000293636	human	ensembl	74_37	-1	known	missense	c.736	p.A246T	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA1	HGNC	ENSG00000139610				82	0	0	68	27	28.4211
SCN8A	0	genome.wustl.edu	37	12	52174462	52174462	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	52174462	52174462	C	T	SNP	SCN8A	ENST00000354534	human	ensembl	74_37	+1	known	silent	c.3849	p.A1283	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Na_channel_a8su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN8A	HGNC	ENSG00000196876				26	0	0	18	8	30.7692
KRT74	0	genome.wustl.edu	37	12	52967361	52967361	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	52967361	52967361	G	A	SNP	KRT74	ENST00000305620	human	ensembl	74_37	-1	known	silent	c.201	p.G67	0.000	NULL	pfam_IF,prints_Keratin_II	-	no_errors	KRT74	HGNC	ENSG00000170484				114	0	0	66	22	25
KRT72	0	genome.wustl.edu	37	12	52981502	52981502	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	52981502	52981502	C	T	SNP	KRT72	ENST00000293745	human	ensembl	74_37	-1	known	missense	c.1223	p.R408H	0.995	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT72	HGNC	ENSG00000170486				171	0	0	121	43	26.2195
KRT4	0	genome.wustl.edu	37	12	53207880	53207880	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	53207880	53207880	A	G	SNP	KRT4	ENST00000293774	human	ensembl	74_37	-1	known	missense	c.185	p.V62A	0.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT4	HGNC	ENSG00000170477				57	0	0	49	28	36.3636
ITGB7	0	genome.wustl.edu	37	12	53587625	53587625	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	53587625	53587625	G	T	SNP	ITGB7	ENST00000267082	human	ensembl	74_37	-1	known	missense	c.1369	p.L457I	0.700	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_EGF_extracell,superfamily_Plexin-like_fold,superfamily_Integrin_bsu_tail,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB7	HGNC	ENSG00000139626				52	0	0	40	14	25.9259
SP7	0	genome.wustl.edu	37	12	53722416	53722416	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	53722416	53722416	G	A	SNP	SP7	ENST00000303846	human	ensembl	74_37	-1	known	silent	c.810	p.C270	0.930	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP7	HGNC	ENSG00000170374				44	0	0	21	23	52.2727
SP1	0	genome.wustl.edu	37	12	53776184	53776184	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	53776184	53776184	C	T	SNP	SP1	ENST00000327443	human	ensembl	74_37	+1	known	silent	c.453	p.A151	0.999	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP1	HGNC	ENSG00000185591				87	0	0	74	28	27.451
ITGA5	0	genome.wustl.edu	37	12	54799076	54799076	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	54799076	54799076	C	T	SNP	ITGA5	ENST00000293379	human	ensembl	74_37	-1	known	missense	c.1099	p.V367I	0.000	pfam_FG-GAP,smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA5	HGNC	ENSG00000161638				70	0	0	35	13	27.0833
NCKAP1L	0	genome.wustl.edu	37	12	54893239	54893239	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	54893239	54893239	G	A	SNP	NCKAP1L	ENST00000293373	human	ensembl	74_37	+1	known	missense	c.203	p.R68Q	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1,superfamily_Nucl_hormone_rcpt_ligand-bd	-	no_errors	NCKAP1L	HGNC	ENSG00000123338				43	0	0	36	17	32.0755
NCKAP1L	0	genome.wustl.edu	37	12	54920358	54920358	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	54920358	54920358	G	A	SNP	NCKAP1L	ENST00000293373	human	ensembl	74_37	+1	known	missense	c.2203	p.V735I	0.002	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1,superfamily_Nucl_hormone_rcpt_ligand-bd	-	no_errors	NCKAP1L	HGNC	ENSG00000123338				72	0	0	54	25	31.6456
ITGA7	0	genome.wustl.edu	37	12	56081805	56081805	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	56081805	56081805	C	T	SNP	ITGA7	ENST00000555728	human	ensembl	74_37	-1	known	missense	c.3265	p.V1089I	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA7	HGNC	ENSG00000135424				250	0	0	153	56	26.7943
ITGA7	0	genome.wustl.edu	37	12	56092588	56092588	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	56092588	56092588	C	T	SNP	ITGA7	ENST00000555728	human	ensembl	74_37	-1	known	missense	c.1036	p.A346T	0.990	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA7	HGNC	ENSG00000135424				50	0	0	44	20	31.25
PMEL	0	genome.wustl.edu	37	12	56348059	56348059	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	56348059	56348059	C	T	SNP	PMEL	ENST00000360714	human	ensembl	74_37	-1	known	missense	c.1946	p.R649H	0.000	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	PMEL	HGNC	ENSG00000185664				68	0	0	54	17	23.9437
ESYT1	0	genome.wustl.edu	37	12	56531349	56531349	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	56531349	56531349	C	T	SNP	ESYT1	ENST00000267113	human	ensembl	74_37	+1	known	silent	c.2035	p.L679	0.026	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_C2_dom,pfscan_C2_dom	-	no_errors	ESYT1	HGNC	ENSG00000139641				241	0	0	167	66	28.3262
RNF41	0	genome.wustl.edu	37	12	56600349	56600349	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	56600349	56600349	C	T	SNP	RNF41	ENST00000345093	human	ensembl	74_37	-1	known	missense	c.836	p.R279H	1.000	pfam_USP8_interacting	pfam_USP8_interacting,pfam_Znf_C3HC4_RING-type,pfam_Ubox_domain,superfamily_TRAF-like,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	RNF41	HGNC	ENSG00000181852				120	0	0	109	22	16.7939
CNPY2	0	genome.wustl.edu	37	12	56704996	56704996	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	56704996	56704996	G	A	SNP	CNPY2	ENST00000273308	human	ensembl	74_37	-1	known	missense	c.407	p.A136V	1.000	pfam_DUF3456,superfamily_Saposin-like,pfscan_SaposinB	pfam_DUF3456,superfamily_Saposin-like,pfscan_SaposinB	-	no_errors	CNPY2	HGNC	ENSG00000257727				236	1	0.421941	182	64	26.0163
ATP5B	0	genome.wustl.edu	37	12	57036479	57036479	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	57036479	57036479	C	T	SNP	ATP5B	ENST00000262030	human	ensembl	74_37	-1	known	missense	c.929	p.R310H	1.000	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_ATPase_F1-cplx_bsu	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,pfam_ATPase_F1/V1/A1-cplx_a/bsu_C,pfam_ATPase_F1_a/bsu_N,superfamily_P-loop_NTPase,superfamily_ATPase_F1/V1/A1-cplx_a/bsu_C,superfamily_ATPase_F1_a/bsu_N,smart_AAA+_ATPase,tigrfam_ATPase_F1-cplx_bsu	-	no_errors	ATP5B	HGNC	ENSG00000110955				63	0	0	58	13	18.3099
STAC3	0	genome.wustl.edu	37	12	57640669	57640669	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	57640669	57640669	T	C	SNP	STAC3	ENST00000332782	human	ensembl	74_37	-1	known	missense	c.521	p.N174S	1.000	NULL	pfam_SH3_2,pfam_SH3_domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_SH3_domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_SH3_domain,prints_p67phox	-	no_errors	STAC3	HGNC	ENSG00000185482				107	0	0	81	33	28.9474
LRIG3	0	genome.wustl.edu	37	12	59274454	59274454	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	59274454	59274454	C	A	SNP	LRIG3	ENST00000320743	human	ensembl	74_37	-1	known	missense	c.1710	p.E570D	0.023	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG3	HGNC	ENSG00000139263				55	0	0	42	13	23.6364
MON2	0	genome.wustl.edu	37	12	62946683	62946683	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	62946683	62946683	T	C	SNP	MON2	ENST00000393630	human	ensembl	74_37	+1	known	missense	c.2942	p.F981S	1.000	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold	-	no_errors	MON2	HGNC	ENSG00000061987				51	0	0	25	19	43.1818
DPY19L2	0	genome.wustl.edu	37	12	63954355	63954355	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	63954355	63954355	G	A	SNP	DPY19L2	ENST00000324472	human	ensembl	74_37	-1	known	silent	c.2214	p.D738	0.089	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L2	HGNC	ENSG00000177990				51	0	0	42	10	19.2308
RASSF3	0	genome.wustl.edu	37	12	65085254	65085254	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	65085254	65085254	C	T	SNP	RASSF3	ENST00000283172	human	ensembl	74_37	+1	known	missense	c.224	p.T75M	0.980	NULL	NULL	-	no_errors	RASSF3	HGNC	ENSG00000153179				31	0	0	30	8	21.0526
HELB	0	genome.wustl.edu	37	12	66696538	66696538	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	66696538	66696538	T	G	SNP	HELB	ENST00000247815	human	ensembl	74_37	+1	known	missense	c.155	p.V52G	0.009	NULL	superfamily_P-loop_NTPase	-	no_errors	HELB	HGNC	ENSG00000127311				22	0	0	25	6	19.3548
CHD4	0	genome.wustl.edu	37	12	6688047	6688047	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	6688047	6688047	G	A	SNP	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	missense	c.5030	p.A1677V	0.948	NULL	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642				34	0	0	34	12	26.087
ZNF384	0	genome.wustl.edu	37	12	6777196	6777196	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	6777196	6777196	A	G	SNP	ZNF384	ENST00000361959	human	ensembl	74_37	-1	known	missense	c.1418	p.V473A	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF384	HGNC	ENSG00000126746				51	0	0	40	20	33.3333
RAP1B	0	genome.wustl.edu	37	12	69044223	69044223	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	69044223	69044223	C	A	SNP	RAP1B	ENST00000250559	human	ensembl	74_37	+1	known	missense	c.101	p.P34H	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAP1B	HGNC	ENSG00000127314				9	0	0	20	3	13.0435
USP5	0	genome.wustl.edu	37	12	6973052	6973052	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	6973052	6973052	C	T	SNP	USP5	ENST00000229268	human	ensembl	74_37	+1	known	silent	c.2013	p.D671	0.324	pfam_Peptidase_C19/C67,pfam_UBA/Ts_N,smart_UBA/transl_elong_EF1B_N_euk,pirsf_Ubiquitinyl_hydrolase,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_UBA/Ts_N,pfam_Znf_UBP,superfamily_UBA-like,smart_Znf_UBP,smart_UBA/transl_elong_EF1B_N_euk,pirsf_Ubiquitinyl_hydrolase,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP5	HGNC	ENSG00000111667				81	0	0	62	25	28.7356
FRS2	0	genome.wustl.edu	37	12	69968607	69968607	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	69968607	69968607	C	T	SNP	FRS2	ENST00000299293	human	ensembl	74_37	+1	known	missense	c.1399	p.R467C	1.000	NULL	pfam_Insln_rcpt_S1,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	FRS2	HGNC	ENSG00000166225				100	0	0	72	27	27.2727
PTPRR	0	genome.wustl.edu	37	12	71095090	71095090	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	71095090	71095090	C	T	SNP	PTPRR	ENST00000283228	human	ensembl	74_37	-1	known	missense	c.1021	p.V341I	1.000	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,prints_Tyr_Pase_KIM-con	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRR	HGNC	ENSG00000153233				47	0	0	43	11	20.3704
TRHDE-AS1	0	genome.wustl.edu	37	12	72667376	72667376	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	72667376	72667376	G	A	SNP	TRHDE-AS1	ENST00000426250	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.548	-	-	-	no_errors	TRHDE-AS1	HGNC	ENSG00000236333				53	0	0	47	17	26.5625
APOBEC1	0	genome.wustl.edu	37	12	7805361	7805361	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	7805361	7805361	G	A	SNP	APOBEC1	ENST00000229304	human	ensembl	74_37	-1	known	missense	c.115	p.L39F	1.000	pfam_APOBEC_N	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC1	HGNC	ENSG00000111701				65	0	0	69	14	16.8675
KITLG	0	genome.wustl.edu	37	12	88912498	88912498	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	88912498	88912498	C	T	SNP	KITLG	ENST00000228280	human	ensembl	74_37	-1	known	silent	c.339	p.E113	0.894	pfam_SCF,superfamily_4_helix_cytokine-like_core,pirsf_SCF	pfam_SCF,superfamily_4_helix_cytokine-like_core,pirsf_SCF	-	no_errors	KITLG	HGNC	ENSG00000049130				61	0	0	56	14	20
CCER1	0	genome.wustl.edu	37	12	91348466	91348466	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	91348466	91348466	G	A	SNP	CCER1	ENST00000358859	human	ensembl	74_37	-1	known	silent	c.54	p.G18	0.465	NULL	NULL	-	no_errors	CCER1	HGNC	ENSG00000197651				14	0	0	13	6	31.5789
LINC00987	0	genome.wustl.edu	37	12	9393050	9393050	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	9393050	9393050	C	T	SNP	LINC00987	ENST00000427111	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00987	HGNC	ENSG00000237248				15	0	0	16	5	23.8095
LTA4H	0	genome.wustl.edu	37	12	96394809	96394809	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	96394809	96394809	G	A	SNP	LTA4H	ENST00000228740	human	ensembl	74_37	-1	known	silent	c.1794	p.P598	0.005	pfam_Peptidase_M1_C,superfamily_ARM-type_fold,tigrfam_Leukotriene_A4_hydrolase	pfam_Peptidase_M1_N,pfam_Peptidase_M1_C,superfamily_ARM-type_fold,prints_Peptidase_M1_N,tigrfam_Leukotriene_A4_hydrolase	-	no_errors	LTA4H	HGNC	ENSG00000111144				100	0	0	59	25	29.7619
ELK3	0	genome.wustl.edu	37	12	96640852	96640852	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	96640852	96640852	G	A	SNP	ELK3	ENST00000228741	human	ensembl	74_37	+1	known	silent	c.342	p.A114	0.571	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELK3	HGNC	ENSG00000111145				29	0	0	21	6	22.2222
TEX30	0	genome.wustl.edu	37	13	103419621	103419621	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	103419621	103419621	A	G	SNP	TEX30	ENST00000376032	human	ensembl	74_37	-1	known	splice_site	c.504+2	e4+2	1.000	-	-	-	no_errors	TEX30	HGNC	ENSG00000151287				46	0	0	38	12	24
COL4A1	0	genome.wustl.edu	37	13	110814758	110814758	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	110814758	110814758	G	A	SNP	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	silent	c.4281	p.P1427	0.669	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498				106	0	0	125	41	24.6988
COL4A2	0	genome.wustl.edu	37	13	111155630	111155630	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	111155630	111155630	G	A	SNP	COL4A2	ENST00000360467	human	ensembl	74_37	+1	known	splice_site	c.4039+1	e41+1	1.000	-	-	-	no_errors	COL4A2	HGNC	ENSG00000134871				28	0	0	46	13	22.0339
F10	0	genome.wustl.edu	37	13	113803660	113803660	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	113803660	113803660	C	T	SNP	F10	ENST00000375559	human	ensembl	74_37	+1	known	silent	c.1296	p.F432	0.818	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,pfam_GLA_domain,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Peptidase_S1,prints_Peptidase_S1A,prints_GLA_domain,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1	-	no_errors	F10	HGNC	ENSG00000126218				94	0	0	78	26	25
DCUN1D2	0	genome.wustl.edu	37	13	114138200	114138200	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	114138200	114138200	C	T	SNP	DCUN1D2	ENST00000478244	human	ensembl	74_37	-1	known	missense	c.175	p.A59T	0.000	NULL	pfam_PONY_dom,superfamily_UBA-like	-	no_errors	DCUN1D2	HGNC	ENSG00000150401				132	0	0	138	47	25.4054
TMCO3	0	genome.wustl.edu	37	13	114150047	114150047	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	114150047	114150047	C	T	SNP	TMCO3	ENST00000434316	human	ensembl	74_37	+1	known	missense	c.151	p.R51W	0.000	NULL	pfam_Cation/H_exchanger	-	no_errors	TMCO3	HGNC	ENSG00000150403				58	0	0	50	14	21.875
MPHOSPH8	0	genome.wustl.edu	37	13	20216317	20216317	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	20216317	20216317	C	T	SNP	MPHOSPH8	ENST00000414242	human	ensembl	74_37	+1	known	silent	c.276	p.P92	0.210	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_Ankyrin_rpt,pfam_Chromo_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Chromo_domain/shadow	-	no_errors	MPHOSPH8	HGNC	ENSG00000196199				55	0	0	58	29	33.3333
SACS	0	genome.wustl.edu	37	13	23929463	23929463	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	23929463	23929463	C	A	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.1288	p.D430Y	0.002	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				56	0	0	74	19	20.4301
AMER2	0	genome.wustl.edu	37	13	25745711	25745711	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	25745711	25745711	C	A	SNP	AMER2	ENST00000515384	human	ensembl	74_37	-1	known	missense	c.47	p.R16L	0.078	NULL	pfam_Uncharacterised_FAM123	-	no_errors	AMER2	HGNC	ENSG00000165566				18	0	0	14	11	44
ATP8A2	0	genome.wustl.edu	37	13	26133873	26133873	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	26133873	26133873	T	C	SNP	ATP8A2	ENST00000381655	human	ensembl	74_37	+1	known	missense	c.1367	p.L456S	0.903	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A2	HGNC	ENSG00000132932				53	0	0	72	12	14.2857
POLR1D	0	genome.wustl.edu	37	13	28197233	28197233	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	28197233	28197233	G	A	SNP	POLR1D	ENST00000302979	human	ensembl	74_37	+1	known	missense	c.248	p.R83H	0.998	pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer	pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer	-	no_errors	POLR1D	HGNC	ENSG00000186184				77	0	0	70	38	35.1852
PAN3	0	genome.wustl.edu	37	13	28834652	28834652	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	28834652	28834652	C	T	SNP	PAN3	ENST00000380958	human	ensembl	74_37	+1	known	silent	c.1317	p.N439	1.000	NULL	superfamily_Kinase-like_dom,smart_Znf_CCCH,pfscan_Prot_kinase_dom	-	no_errors	PAN3	HGNC	ENSG00000152520				63	0	0	62	40	39.2157
FRY	0	genome.wustl.edu	37	13	32653072	32653072	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	32653072	32653072	C	A	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	missense	c.172	p.P58T	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910				284	0	0	233	134	36.5123
BRCA2	0	genome.wustl.edu	37	13	32907096	32907096	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	32907096	32907096	T	C	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.1481	p.V494A	0.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618				68	0	0	62	31	33.3333
KL	0	genome.wustl.edu	37	13	33590920	33590920	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	33590920	33590920	G	A	SNP	KL	ENST00000380099	human	ensembl	74_37	+1	known	silent	c.342	p.P114	0.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	KL	HGNC	ENSG00000133116				27	0	0	28	21	42.8571
NBEA	0	genome.wustl.edu	37	13	35733237	35733237	+	Nonsense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	35733237	35733237	A	T	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	nonsense	c.2929	p.K977*	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				61	0	0	64	45	41.2844
NBEA	0	genome.wustl.edu	37	13	35734077	35734077	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	35734077	35734077	G	A	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.3769	p.A1257T	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				11	0	0	18	3	14.2857
DCLK1	0	genome.wustl.edu	37	13	36686023	36686023	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	36686023	36686023	T	C	SNP	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	missense	c.706	p.T236A	1.000	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083				74	0	0	96	23	19.3277
RFXAP	0	genome.wustl.edu	37	13	37401883	37401883	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	37401883	37401883	C	A	SNP	RFXAP	ENST00000255476	human	ensembl	74_37	+1	known	nonsense	c.812	p.S271*	0.020	NULL	NULL	-	no_errors	RFXAP	HGNC	ENSG00000133111				42	0	0	41	8	16.3265
COG6	0	genome.wustl.edu	37	13	40293455	40293455	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	40293455	40293455	A	G	SNP	COG6	ENST00000455146	human	ensembl	74_37	+1	known	missense	c.1367	p.H456R	1.000	pfam_COG6	pfam_COG6	-	no_errors	COG6	HGNC	ENSG00000133103				26	0	0	28	19	40.4255
VWA8	0	genome.wustl.edu	37	13	42303690	42303690	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	42303690	42303690	G	A	SNP	VWA8	ENST00000379310	human	ensembl	74_37	-1	known	missense	c.2626	p.R876C	1.000	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_dyneun-rel_AAA,pfam_VWF_A,superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA8	HGNC	ENSG00000102763				26	0	0	27	15	35.7143
TSC22D1	0	genome.wustl.edu	37	13	45149755	45149755	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	45149755	45149755	C	T	SNP	TSC22D1	ENST00000458659	human	ensembl	74_37	-1	known	silent	c.456	p.S152	0.995	NULL	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D1	HGNC	ENSG00000102804				81	0	0	57	16	21.9178
ENSG00000273149	0	genome.wustl.edu	37	13	45915235	45915235	+	RNA	SNP	C	C	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	45915235	45915235	C	G	SNP	ENSG00000273149	ENST00000610057	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	RP11-290D2.6	Clone_based_vega_gene	ENSG00000273149				29	0	0	35	7	16.6667
CPB2	0	genome.wustl.edu	37	13	46632459	46632459	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	46632459	46632459	G	A	SNP	CPB2	ENST00000181383	human	ensembl	74_37	-1	known	missense	c.854	p.S285L	1.000	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPB2	HGNC	ENSG00000080618				65	0	0	85	32	27.3504
THSD1	0	genome.wustl.edu	37	13	52971460	52971460	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	52971460	52971460	T	C	SNP	THSD1	ENST00000258613	human	ensembl	74_37	-1	known	missense	c.928	p.M310V	0.066	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD1	HGNC	ENSG00000136114				69	0	0	78	15	16.129
MYCBP2	0	genome.wustl.edu	37	13	77636771	77636771	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	77636771	77636771	G	A	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	missense	c.12734	p.S4245L	1.000	NULL	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810				75	0	0	81	16	16.4948
SLITRK6	0	genome.wustl.edu	37	13	86368498	86368498	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	86368498	86368498	G	A	SNP	SLITRK6	ENST00000400286	human	ensembl	74_37	-1	known	missense	c.2146	p.H716Y	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK6	HGNC	ENSG00000184564				203	0	0	251	68	21.3166
SLITRK5	0	genome.wustl.edu	37	13	88328422	88328422	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	88328422	88328422	G	T	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.779	p.G260V	1.000	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				126	0	0	99	56	36.129
SLITRK5	0	genome.wustl.edu	37	13	88330043	88330043	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	88330043	88330043	G	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	silent	c.2400	p.P800	0.172	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				41	0	0	39	22	36.0656
DCT	0	genome.wustl.edu	37	13	95131311	95131311	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	95131311	95131311	C	T	SNP	DCT	ENST00000446125	human	ensembl	74_37	-1	known	missense	c.199	p.D67N	1.000	NULL	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	DCT	HGNC	ENSG00000080166				81	0	0	72	42	36.8421
TGDS	0	genome.wustl.edu	37	13	95229643	95229643	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	95229643	95229643	A	G	SNP	TGDS	ENST00000261296	human	ensembl	74_37	-1	known	missense	c.866	p.V289A	0.998	pfam_dTDP_dehydrorham_reduct	pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase,pfam_dTDP_dehydrorham_reduct,pfam_Polysac_CapD-like,pfam_Male_sterile_NAD-bd	-	no_errors	TGDS	HGNC	ENSG00000088451				97	0	0	106	24	18.4615
CLDN10	0	genome.wustl.edu	37	13	96229572	96229572	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	96229572	96229572	T	C	SNP	CLDN10	ENST00000299339	human	ensembl	74_37	+1	known	silent	c.552	p.S184	1.000	prints_Claudin10	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin10,prints_Claudin	-	no_errors	CLDN10	HGNC	ENSG00000134873				31	0	0	37	11	22.9167
TECPR2	0	genome.wustl.edu	37	14	102910040	102910040	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	102910040	102910040	C	T	SNP	TECPR2	ENST00000359520	human	ensembl	74_37	+1	known	silent	c.2809	p.L937	0.983	superfamily_RCC1/BLIP-II,smart_Beta-propeller_rpt_TECPR	pfam_Beta-propeller_rpt_TECPR,superfamily_WD40_repeat_dom,superfamily_RCC1/BLIP-II,smart_WD40_repeat,smart_Beta-propeller_rpt_TECPR	-	no_errors	TECPR2	HGNC	ENSG00000196663				45	0	0	36	12	25
CDC42BPB	0	genome.wustl.edu	37	14	103413017	103413017	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	103413017	103413017	G	A	SNP	CDC42BPB	ENST00000361246	human	ensembl	74_37	-1	known	missense	c.3536	p.T1179M	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	CDC42BPB	HGNC	ENSG00000198752				51	0	0	32	21	39.6226
ASPG	0	genome.wustl.edu	37	14	104552117	104552117	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	104552117	104552117	G	A	SNP	ASPG	ENST00000455920	human	ensembl	74_37	+1	known	missense	c.10	p.A4T	0.631	superfamily_Asparaginase/glutaminase	pfam_Asparaginase/glutaminase,pfam_Ankyrin_rpt,superfamily_Asparaginase/glutaminase,superfamily_Ankyrin_rpt-contain_dom,smart_Asparaginase/glutaminase,smart_Ankyrin_rpt,prints_Asparaginase/glutaminase,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_AsnASEI	-	no_errors	ASPG	HGNC	ENSG00000166183				34	0	0	21	13	38.2353
JAG2	0	genome.wustl.edu	37	14	105622325	105622325	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	105622325	105622325	C	A	SNP	JAG2	ENST00000331782	human	ensembl	74_37	-1	known	missense	c.477	p.E159D	0.792	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	JAG2	HGNC	ENSG00000184916				30	0	0	18	9	33.3333
PACS2	0	genome.wustl.edu	37	14	105849584	105849584	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	105849584	105849584	A	T	SNP	PACS2	ENST00000551743	human	ensembl	74_37	+1	putative	missense	c.44	p.H15L	0.000	NULL	pfam_Phosphofurin_acidic_CS-1	-	no_errors	PACS2	HGNC	ENSG00000179364				62	0	0	37	12	24.4898
OR4K1	0	genome.wustl.edu	37	14	20404206	20404206	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	20404206	20404206	T	C	SNP	OR4K1	ENST00000285600	human	ensembl	74_37	+1	known	silent	c.381	p.C127	0.941	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K1	HGNC	ENSG00000155249				126	0	0	140	17	10.828
OR10G2	0	genome.wustl.edu	37	14	22102374	22102374	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	22102374	22102374	T	C	SNP	OR10G2	ENST00000542433	human	ensembl	74_37	-1	known	missense	c.625	p.R209G	0.006	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G2	HGNC	ENSG00000255582				167	0	0	120	36	23.0769
LRP10	0	genome.wustl.edu	37	14	23346575	23346575	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	23346575	23346575	C	T	SNP	LRP10	ENST00000359591	human	ensembl	74_37	+1	known	missense	c.1981	p.R661C	1.000	NULL	pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP10	HGNC	ENSG00000197324				120	0	0	107	39	26.7123
HOMEZ	0	genome.wustl.edu	37	14	23745099	23745099	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	23745099	23745099	G	A	SNP	HOMEZ	ENST00000431326	human	ensembl	74_37	-1	known	silent	c.1344	p.N448	0.937	NULL	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOMEZ	HGNC	ENSG00000215271				41	0	0	24	16	40
MYH6	0	genome.wustl.edu	37	14	23876366	23876366	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	23876366	23876366	G	A	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	missense	c.67	p.R23C	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616				192	0	0	139	37	21.0227
ENSG00000258727	0	genome.wustl.edu	37	14	24035961	24035961	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	24035961	24035961	C	T	SNP	ENSG00000258727	ENST00000555968	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-66N24.3	Clone_based_vega_gene	ENSG00000258727				54	0	0	38	12	24
IPO4	0	genome.wustl.edu	37	14	24657835	24657835	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	24657835	24657835	G	T	SNP	IPO4	ENST00000354464	human	ensembl	74_37	-1	known	missense	c.79	p.Q27K	1.000	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	pfam_HEAT,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_HEAT_type_2,pfscan_Importin-beta_N	-	no_errors	IPO4	HGNC	ENSG00000196497				29	0	0	20	5	20
CBLN3	0	genome.wustl.edu	37	14	24897543	24897543	+	Silent	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	24897543	24897543	G	C	SNP	CBLN3	ENST00000267406	human	ensembl	74_37	-1	known	silent	c.369	p.V123	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN3	HGNC	ENSG00000139899				115	0	0	86	34	28.3333
HECTD1	0	genome.wustl.edu	37	14	31570424	31570424	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	31570424	31570424	G	C	SNP	HECTD1	ENST00000399332	human	ensembl	74_37	-1	known	missense	c.7657	p.L2553V	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_Sad1_UNC_C,pfam_Mib_Herc2,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,superfamily_Galactose-bd-like,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT	-	no_errors	HECTD1	HGNC	ENSG00000092148				58	0	0	60	22	26.8293
CLEC14A	0	genome.wustl.edu	37	14	38724676	38724676	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	38724676	38724676	G	A	SNP	CLEC14A	ENST00000342213	human	ensembl	74_37	-1	known	silent	c.552	p.P184	0.858	NULL	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC14A	HGNC	ENSG00000176435				98	0	0	95	26	21.4876
PNN	0	genome.wustl.edu	37	14	39648395	39648395	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	39648395	39648395	G	A	SNP	PNN	ENST00000216832	human	ensembl	74_37	+1	known	missense	c.599	p.R200H	1.000	pfam_Pinin_SDK_MemA	pfam_Pinin_SDK_N,pfam_Pinin_SDK_MemA	-	no_errors	PNN	HGNC	ENSG00000100941				109	0	0	96	38	28.3582
NIN	0	genome.wustl.edu	37	14	51224353	51224353	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	51224353	51224353	G	A	SNP	NIN	ENST00000245441	human	ensembl	74_37	-1	known	missense	c.3395	p.T1132M	0.000	NULL	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503				164	0	0	136	47	25.6831
NIN	0	genome.wustl.edu	37	14	51243811	51243811	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	51243811	51243811	A	G	SNP	NIN	ENST00000245441	human	ensembl	74_37	-1	known	silent	c.522	p.S174	0.004	NULL	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503				62	0	0	57	18	24
PELI2	0	genome.wustl.edu	37	14	56763566	56763566	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	56763566	56763566	C	T	SNP	PELI2	ENST00000267460	human	ensembl	74_37	+1	known	silent	c.945	p.H315	1.000	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI2	HGNC	ENSG00000139946				51	0	0	51	8	13.5593
C14orf105	0	genome.wustl.edu	37	14	57960259	57960259	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	57960259	57960259	C	A	SNP	C14orf105	ENST00000216445	human	ensembl	74_37	-1	known	missense	c.175	p.G59W	0.904	NULL	NULL	-	no_errors	C14orf105	HGNC	ENSG00000100557				76	0	0	61	29	32.2222
RTN1	0	genome.wustl.edu	37	14	60194028	60194028	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	60194028	60194028	G	A	SNP	RTN1	ENST00000267484	human	ensembl	74_37	-1	known	silent	c.1374	p.R458	0.925	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN1	HGNC	ENSG00000139970				9	0	0	8	5	38.4615
RTN1	0	genome.wustl.edu	37	14	60194327	60194327	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	60194327	60194327	C	T	SNP	RTN1	ENST00000267484	human	ensembl	74_37	-1	known	missense	c.1075	p.A359T	1.000	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN1	HGNC	ENSG00000139970				25	0	0	17	7	29.1667
PPM1A	0	genome.wustl.edu	37	14	60749953	60749953	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	60749953	60749953	G	A	SNP	PPM1A	ENST00000325642	human	ensembl	74_37	+1	known	missense	c.751	p.A251T	1.000	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,pfam_PP2C_C,superfamily_PP2C-like_dom,superfamily_PP2C_C,smart_PP2C-like_dom	-	no_errors	PPM1A	HGNC	ENSG00000100614				80	0	0	66	19	22.3529
PRKCH	0	genome.wustl.edu	37	14	61857990	61857990	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	61857990	61857990	C	T	SNP	PRKCH	ENST00000332981	human	ensembl	74_37	+1	known	silent	c.411	p.T137	0.991	superfamily_C2_dom,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCH	HGNC	ENSG00000027075				54	0	0	37	10	21.2766
KCNH5	0	genome.wustl.edu	37	14	63511835	63511835	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	63511835	63511835	T	A	SNP	KCNH5	ENST00000322893	human	ensembl	74_37	-1	known	missense	c.70	p.S24C	1.000	superfamily_PAS,prints_K_chnl_volt-dep_EAG	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH5	HGNC	ENSG00000140015				78	0	0	75	14	15.7303
PLEKHH1	0	genome.wustl.edu	37	14	68028745	68028745	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	68028745	68028745	G	A	SNP	PLEKHH1	ENST00000329153	human	ensembl	74_37	+1	known	silent	c.498	p.A166	0.000	NULL	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH1	HGNC	ENSG00000054690				39	0	0	34	10	22.7273
ACTN1	0	genome.wustl.edu	37	14	69347589	69347589	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	69347589	69347589	C	T	SNP	ACTN1	ENST00000394419	human	ensembl	74_37	-1	known	missense	c.2071	p.D691N	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN1	HGNC	ENSG00000072110				110	0	0	76	34	30.9091
ACTN1	0	genome.wustl.edu	37	14	69358908	69358908	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	69358908	69358908	G	A	SNP	ACTN1	ENST00000394419	human	ensembl	74_37	-1	known	silent	c.948	p.F316	1.000	pfam_Spectrin_repeat	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN1	HGNC	ENSG00000072110				100	0	0	79	28	26.1682
DCAF5	0	genome.wustl.edu	37	14	69521943	69521943	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	69521943	69521943	C	A	SNP	DCAF5	ENST00000341516	human	ensembl	74_37	-1	known	missense	c.1460	p.R487L	0.995	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF5	HGNC	ENSG00000139990				62	0	0	43	20	31.746
DPF3	0	genome.wustl.edu	37	14	73198564	73198564	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	73198564	73198564	A	G	SNP	DPF3	ENST00000366353	human	ensembl	74_37	-1	known	missense	c.545	p.V182A	0.264	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	DPF3	HGNC	ENSG00000205683				24	0	0	19	6	24
NUMB	0	genome.wustl.edu	37	14	73743385	73743385	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	73743385	73743385	C	T	SNP	NUMB	ENST00000355058	human	ensembl	74_37	-1	known	silent	c.1857	p.Q619	1.000	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pirsf_Numb/numb-like,pfscan_PTB/PI_dom	-	no_errors	NUMB	HGNC	ENSG00000133961				63	0	0	49	16	24.6154
VRTN	0	genome.wustl.edu	37	14	74824357	74824357	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	74824357	74824357	G	A	SNP	VRTN	ENST00000256362	human	ensembl	74_37	+1	known	missense	c.871	p.V291I	0.998	pfam_Transposase_8	pfam_Transposase_8	-	no_errors	VRTN	HGNC	ENSG00000133980				90	0	0	50	21	29.5775
NPC2	0	genome.wustl.edu	37	14	74951266	74951266	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	74951266	74951266	G	A	SNP	NPC2	ENST00000555619	human	ensembl	74_37	-1	known	missense	c.215	p.A72V	1.000	pfam_ML_dom,superfamily_Ig_E-set,smart_ML_dom	pfam_ML_dom,superfamily_Ig_E-set,smart_ML_dom	-	no_errors	NPC2	HGNC	ENSG00000119655				83	0	0	78	25	24.2718
PROX2	0	genome.wustl.edu	37	14	75330060	75330060	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	75330060	75330060	C	T	SNP	PROX2	ENST00000445876	human	ensembl	74_37	-1	known	missense	c.478	p.A160T	0.014	NULL	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	-	no_errors	PROX2	HGNC	ENSG00000119608				25	0	0	30	10	25
CEP128	0	genome.wustl.edu	37	14	81366294	81366294	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	81366294	81366294	G	T	SNP	CEP128	ENST00000281129	human	ensembl	74_37	-1	known	missense	c.560	p.S187Y	1.000	NULL	NULL	-	no_errors	CEP128	HGNC	ENSG00000100629				62	0	0	51	16	23.8806
LGMN	0	genome.wustl.edu	37	14	93170617	93170617	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	93170617	93170617	A	G	SNP	LGMN	ENST00000555699	human	ensembl	74_37	-1	putative	silent	c.1110	p.T370	0.000	NULL	pfam_Peptidase_C13,prints_Peptidase_C13	-	no_errors	LGMN	HGNC	ENSG00000100600				68	0	0	52	12	18.75
COX8C	0	genome.wustl.edu	37	14	93813698	93813698	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	93813698	93813698	C	T	SNP	COX8C	ENST00000342144	human	ensembl	74_37	+1	known	silent	c.84	p.F28	0.007	NULL	pfam_Cyt_c_oxidase_su8,superfamily_Cyt_c_oxidase_su8	-	no_errors	COX8C	HGNC	ENSG00000187581				37	0	0	25	13	34.2105
SERPINA10	0	genome.wustl.edu	37	14	94750338	94750338	+	Silent	SNP	C	C	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	94750338	94750338	C	G	SNP	SERPINA10	ENST00000261994	human	ensembl	74_37	-1	known	silent	c.1299	p.L433	0.001	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA10	HGNC	ENSG00000140093				65	0	0	53	9	14.5161
CLMN	0	genome.wustl.edu	37	14	95669173	95669173	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	95669173	95669173	A	G	SNP	CLMN	ENST00000298912	human	ensembl	74_37	-1	known	splice_site	c.2511+2	e9+2	0.995	-	-	-	no_errors	CLMN	HGNC	ENSG00000165959				116	0	0	72	24	25
ENSG00000259583	0	genome.wustl.edu	37	15	101436086	101436086	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	101436086	101436086	C	T	SNP	ENSG00000259583	ENST00000560351	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-66B24.4	Clone_based_vega_gene	ENSG00000259583				8	0	0	13	6	31.5789
DNM1P47	0	genome.wustl.edu	37	15	102292953	102292953	+	RNA	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	102292953	102292953	T	C	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660				15	0	0	18	6	25
HERC2P3	0	genome.wustl.edu	37	15	20645818	20645818	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	20645818	20645818	C	T	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229				63	0	0	68	10	12.8205
TUBGCP5	0	genome.wustl.edu	37	15	22855087	22855087	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	22855087	22855087	C	T	SNP	TUBGCP5	ENST00000283645	human	ensembl	74_37	+1	known	silent	c.1548	p.S516	0.972	pfam_TUBGCP	pfam_TUBGCP	-	no_errors	TUBGCP5	HGNC	ENSG00000153575				42	0	0	38	7	15.5556
CYFIP1	0	genome.wustl.edu	37	15	22926026	22926026	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	22926026	22926026	C	T	SNP	CYFIP1	ENST00000313077	human	ensembl	74_37	+1	known	silent	c.168	p.I56	0.993	pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP1	HGNC	ENSG00000068793				88	0	0	59	19	24.359
SNORD116-26	0	genome.wustl.edu	37	15	25344676	25344676	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	25344676	25344676	C	T	SNP	SNORD116-26	ENST00000516006	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD116-26	HGNC	ENSG00000251815				56	0	0	49	14	22.2222
SNHG14	0	genome.wustl.edu	37	15	25464000	25464000	+	RNA	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	25464000	25464000	G	T	SNP	SNHG14	ENST00000453082	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				34	0	0	12	7	36.8421
HERC2	0	genome.wustl.edu	37	15	28447515	28447515	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	28447515	28447515	G	A	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	silent	c.7458	p.S2486	0.995	superfamily_UBA-like	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				73	0	0	65	10	13.3333
HERC2	0	genome.wustl.edu	37	15	28459325	28459325	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	28459325	28459325	C	T	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.6452	p.R2151H	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				95	0	0	72	15	17.2414
OTUD7A	0	genome.wustl.edu	37	15	31819430	31819430	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	31819430	31819430	G	A	SNP	OTUD7A	ENST00000382902	human	ensembl	74_37	-1	known	missense	c.734	p.A245V	1.000	pfam_OTU,pfscan_OTU	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7A	HGNC	ENSG00000169918				168	0	0	131	39	22.9412
AQR	0	genome.wustl.edu	37	15	35202392	35202392	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	35202392	35202392	C	T	SNP	AQR	ENST00000156471	human	ensembl	74_37	-1	known	missense	c.1607	p.R536H	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	AQR	HGNC	ENSG00000021776				108	0	0	108	33	23.4043
C15orf41	0	genome.wustl.edu	37	15	37100597	37100597	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	37100597	37100597	C	T	SNP	C15orf41	ENST00000563167	human	ensembl	74_37	+1	putative	missense	c.76	p.P26S	1.000	NULL	NULL	-	no_errors	C15orf41	HGNC	ENSG00000186073				53	0	0	46	23	33.3333
BAHD1	0	genome.wustl.edu	37	15	40751845	40751845	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	40751845	40751845	G	A	SNP	BAHD1	ENST00000416165	human	ensembl	74_37	+1	known	silent	c.1182	p.S394	0.001	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	BAHD1	HGNC	ENSG00000140320				68	0	0	64	14	17.9487
BAHD1	0	genome.wustl.edu	37	15	40756081	40756081	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	40756081	40756081	C	T	SNP	BAHD1	ENST00000416165	human	ensembl	74_37	+1	known	nonsense	c.1837	p.R613*	1.000	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	BAHD1	HGNC	ENSG00000140320				54	0	0	38	9	19.1489
VPS18	0	genome.wustl.edu	37	15	41192112	41192112	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	41192112	41192112	C	T	SNP	VPS18	ENST00000220509	human	ensembl	74_37	+1	known	silent	c.1096	p.L366	0.988	pfam_Pep3_Vps18	pfam_Pep3_Vps18,pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold	-	no_errors	VPS18	HGNC	ENSG00000104142				82	0	0	60	27	31.0345
CAPN3	0	genome.wustl.edu	37	15	42680050	42680050	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	42680050	42680050	T	A	SNP	CAPN3	ENST00000397163	human	ensembl	74_37	+1	known	missense	c.598	p.F200I	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN3	HGNC	ENSG00000092529				91	0	0	80	29	26.6055
LRRC57	0	genome.wustl.edu	37	15	42839648	42839648	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	42839648	42839648	C	T	SNP	LRRC57	ENST00000323443	human	ensembl	74_37	-1	known	silent	c.303	p.P101	0.046	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC57	HGNC	ENSG00000180979				50	0	0	38	12	24
EPB42	0	genome.wustl.edu	37	15	43495432	43495432	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	43495432	43495432	G	A	SNP	EPB42	ENST00000300215	human	ensembl	74_37	-1	known	nonsense	c.1750	p.R584*	0.006	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	EPB42	HGNC	ENSG00000166947				75	0	0	37	24	39.3443
TP53BP1	0	genome.wustl.edu	37	15	43712857	43712857	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	43712857	43712857	G	T	SNP	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	missense	c.4327	p.R1443S	1.000	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369				79	0	0	73	19	20.6522
DUOX2	0	genome.wustl.edu	37	15	45387776	45387776	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	45387776	45387776	C	T	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	silent	c.4098	p.P1366	0.718	pfam_FAD-bd_8,superfamily_Riboflavin_synthase-like_b-brl	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279				74	0	0	47	13	21.6667
DUOXA2	0	genome.wustl.edu	37	15	45408793	45408793	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	45408793	45408793	G	A	SNP	DUOXA2	ENST00000323030	human	ensembl	74_37	+1	known	silent	c.420	p.A140	0.013	pfam_Dual_oxidase_maturation_fac	pfam_Dual_oxidase_maturation_fac	-	no_errors	DUOXA2	HGNC	ENSG00000140274				103	0	0	70	27	27.8351
SLC12A1	0	genome.wustl.edu	37	15	48541850	48541850	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	48541850	48541850	A	G	SNP	SLC12A1	ENST00000380993	human	ensembl	74_37	+1	known	missense	c.1763	p.H588R	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt2,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A1	HGNC	ENSG00000074803				45	0	0	41	11	21.1538
CYP19A1	0	genome.wustl.edu	37	15	51504687	51504687	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	51504687	51504687	G	A	SNP	CYP19A1	ENST00000260433	human	ensembl	74_37	-1	known	missense	c.1093	p.R365W	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP19A1	HGNC	ENSG00000137869				86	0	0	67	26	27.957
GLDN	0	genome.wustl.edu	37	15	51696626	51696626	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	51696626	51696626	G	A	SNP	GLDN	ENST00000335449	human	ensembl	74_37	+1	known	missense	c.1331	p.G444D	1.000	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,pfam_Collagen,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	GLDN	HGNC	ENSG00000186417				105	0	0	75	46	38.0165
GNB5	0	genome.wustl.edu	37	15	52414903	52414903	+	RNA	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	52414903	52414903	T	C	SNP	GNB5	ENST00000559348	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GNB5	HGNC	ENSG00000069966				43	0	0	36	11	23.4043
ARPP19	0	genome.wustl.edu	37	15	52844160	52844160	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	52844160	52844160	A	G	SNP	ARPP19	ENST00000249822	human	ensembl	74_37	-1	known	missense	c.310	p.S104P	1.000	NULL	pfam_Endosulphine	-	no_errors	ARPP19	HGNC	ENSG00000128989				99	0	0	95	22	18.8034
WDR72	0	genome.wustl.edu	37	15	53957791	53957791	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	53957791	53957791	A	G	SNP	WDR72	ENST00000360509	human	ensembl	74_37	-1	known	missense	c.1940	p.L647P	0.950	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415				52	0	0	53	7	11.6667
ZNF280D	0	genome.wustl.edu	37	15	56968897	56968897	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	56968897	56968897	G	A	SNP	ZNF280D	ENST00000267807	human	ensembl	74_37	-1	known	missense	c.1381	p.P461S	0.999	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280D	HGNC	ENSG00000137871				65	0	0	53	17	24.2857
FOXB1	0	genome.wustl.edu	37	15	60298040	60298040	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	60298040	60298040	C	A	SNP	FOXB1	ENST00000396057	human	ensembl	74_37	+1	known	missense	c.878	p.P293H	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXB1	HGNC	ENSG00000171956				26	0	0	17	5	22.7273
SLC24A1	0	genome.wustl.edu	37	15	65946326	65946326	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	65946326	65946326	T	C	SNP	SLC24A1	ENST00000261892	human	ensembl	74_37	+1	known	missense	c.3209	p.L1070P	1.000	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A1	HGNC	ENSG00000074621				101	0	0	85	29	25.4386
DIS3L	0	genome.wustl.edu	37	15	66612978	66612978	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	66612978	66612978	C	T	SNP	DIS3L	ENST00000319212	human	ensembl	74_37	+1	known	missense	c.1234	p.R412C	1.000	NULL	NULL	-	no_errors	DIS3L	HGNC	ENSG00000166938				63	0	0	39	22	36.0656
KIF23	0	genome.wustl.edu	37	15	69728919	69728919	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	69728919	69728919	C	T	SNP	KIF23	ENST00000260363	human	ensembl	74_37	+1	known	silent	c.1413	p.D471	0.001	superfamily_P-loop_NTPase	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF23	HGNC	ENSG00000137807				30	0	0	34	9	20.9302
LRRC49	0	genome.wustl.edu	37	15	71300948	71300948	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	71300948	71300948	A	C	SNP	LRRC49	ENST00000260382	human	ensembl	74_37	+1	known	missense	c.1400	p.N467T	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC49	HGNC	ENSG00000137821				16	0	0	11	5	31.25
NR2E3	0	genome.wustl.edu	37	15	72109919	72109919	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	72109919	72109919	C	T	SNP	NR2E3	ENST00000326995	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NR2E3	HGNC	ENSG00000031544				97	0	0	106	32	23.1884
PML	0	genome.wustl.edu	37	15	74290466	74290466	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	74290466	74290466	C	T	SNP	PML	ENST00000268058	human	ensembl	74_37	+1	known	missense	c.251	p.S84L	0.001	smart_Znf_RING,pfscan_Znf_RING	pfam_DUF3583,pfam_Znf_B-box,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	PML	HGNC	ENSG00000140464				59	0	0	38	16	29.6296
ISLR2	0	genome.wustl.edu	37	15	74427108	74427108	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	74427108	74427108	C	T	SNP	ISLR2	ENST00000361742	human	ensembl	74_37	+1	known	silent	c.2013	p.D671	0.020	NULL	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Ig-like_dom	-	no_errors	ISLR2	HGNC	ENSG00000167178				60	0	0	41	15	26.7857
CLK3	0	genome.wustl.edu	37	15	74912508	74912508	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	74912508	74912508	G	A	SNP	CLK3	ENST00000395066	human	ensembl	74_37	+1	known	missense	c.755	p.R252H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CLK3	HGNC	ENSG00000179335				217	0	0	179	55	23.5043
C15orf39	0	genome.wustl.edu	37	15	75498393	75498393	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	75498393	75498393	G	A	SNP	C15orf39	ENST00000360639	human	ensembl	74_37	+1	known	missense	c.4	p.A2T	0.999	NULL	NULL	-	no_errors	C15orf39	HGNC	ENSG00000167173				16	0	0	16	5	23.8095
ANP32BP1	0	genome.wustl.edu	37	15	75614717	75614717	+	RNA	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	75614717	75614717	T	A	SNP	ANP32BP1	ENST00000564205	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ANP32BP1	HGNC	ENSG00000259790				41	0	0	22	6	21.4286
CSPG4	0	genome.wustl.edu	37	15	75974714	75974714	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	75974714	75974714	G	A	SNP	CSPG4	ENST00000308508	human	ensembl	74_37	-1	known	missense	c.4870	p.R1624W	0.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	-	no_errors	CSPG4	HGNC	ENSG00000173546				93	0	0	79	20	20.202
CHRNA3	0	genome.wustl.edu	37	15	78894268	78894268	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	78894268	78894268	C	T	SNP	CHRNA3	ENST00000326828	human	ensembl	74_37	-1	known	missense	c.716	p.R239H	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA3	HGNC	ENSG00000080644				38	0	0	42	26	38.2353
RASGRF1	0	genome.wustl.edu	37	15	79290463	79290463	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	79290463	79290463	G	A	SNP	RASGRF1	ENST00000419573	human	ensembl	74_37	-1	known	missense	c.2989	p.R997W	1.000	superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF1	HGNC	ENSG00000058335				83	0	0	77	14	15.3846
RASGRF1	0	genome.wustl.edu	37	15	79339295	79339295	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	79339295	79339295	G	A	SNP	RASGRF1	ENST00000419573	human	ensembl	74_37	-1	known	missense	c.671	p.T224I	1.000	superfamily_DH-domain,pfscan_IQ_motif_EF-hand-BS	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF1	HGNC	ENSG00000058335				89	0	0	89	22	19.8198
MTHFS	0	genome.wustl.edu	37	15	80181594	80181594	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	80181594	80181594	G	A	SNP	MTHFS	ENST00000258874	human	ensembl	74_37	-1	known	nonsense	c.220	p.R74*	0.055	pfam_FTHF_cligase,pirsf_FTHF_cligase,tigrfam_FTHF_cligase	pfam_FTHF_cligase,pirsf_FTHF_cligase,tigrfam_FTHF_cligase	-	no_errors	MTHFS	HGNC	ENSG00000136371				75	0	0	95	18	15.9292
TMC3	0	genome.wustl.edu	37	15	81625552	81625552	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	81625552	81625552	C	T	SNP	TMC3	ENST00000359440	human	ensembl	74_37	-1	known	silent	c.2511	p.S837	0.388	NULL	pfam_TMC	-	no_errors	TMC3	HGNC	ENSG00000188869				83	0	0	65	16	19.7531
ZSCAN2	0	genome.wustl.edu	37	15	85147393	85147393	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	85147393	85147393	C	T	SNP	ZSCAN2	ENST00000448803	human	ensembl	74_37	+1	known	missense	c.235	p.R79C	0.914	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN2	HGNC	ENSG00000176371				36	0	0	27	14	34.1463
DET1	0	genome.wustl.edu	37	15	89074383	89074383	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	89074383	89074383	C	T	SNP	DET1	ENST00000444300	human	ensembl	74_37	-1	known	missense	c.587	p.R196Q	1.000	pfam_De-etiolated_protein_1_Det1	pfam_De-etiolated_protein_1_Det1	-	no_errors	DET1	HGNC	ENSG00000140543				52	0	0	59	11	15.7143
FURIN	0	genome.wustl.edu	37	15	91422181	91422181	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	91422181	91422181	G	A	SNP	FURIN	ENST00000268171	human	ensembl	74_37	+1	known	missense	c.1028	p.S343N	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,prints_Peptidase_S8_subtilisin-rel	-	no_errors	FURIN	HGNC	ENSG00000140564				25	0	0	28	7	20
SV2B	0	genome.wustl.edu	37	15	91801724	91801724	+	Silent	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	91801724	91801724	C	A	SNP	SV2B	ENST00000330276	human	ensembl	74_37	+1	known	silent	c.858	p.P286	0.956	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2B	HGNC	ENSG00000185518				96	0	0	89	22	19.8198
CHD2	0	genome.wustl.edu	37	15	93567925	93567925	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	93567925	93567925	G	A	SNP	CHD2	ENST00000394196	human	ensembl	74_37	+1	novel	missense	c.5477	p.R1826Q	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575				47	0	0	41	6	12.766
TTC23	0	genome.wustl.edu	37	15	99740199	99740199	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	99740199	99740199	T	C	SNP	TTC23	ENST00000262074	human	ensembl	74_37	-1	known	silent	c.684	p.V228	0.002	NULL	smart_TPR_repeat	-	no_errors	TTC23	HGNC	ENSG00000103852				77	0	0	96	30	23.8095
TTC23	0	genome.wustl.edu	37	15	99762041	99762041	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	99762041	99762041	C	T	SNP	TTC23	ENST00000262074	human	ensembl	74_37	-1	known	missense	c.209	p.R70H	0.968	NULL	smart_TPR_repeat	-	no_errors	TTC23	HGNC	ENSG00000103852				27	0	0	31	9	22.5
ATF7IP2	0	genome.wustl.edu	37	16	10524868	10524868	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	10524868	10524868	A	G	SNP	ATF7IP2	ENST00000356427	human	ensembl	74_37	+1	known	missense	c.391	p.T131A	0.000	NULL	superfamily_Fibronectin_type3	-	no_errors	ATF7IP2	HGNC	ENSG00000166669				87	0	0	75	18	19.3548
C16orf91	0	genome.wustl.edu	37	16	1478472	1478472	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	1478472	1478472	C	T	SNP	C16orf91	ENST00000310355	human	ensembl	74_37	-1	known	missense	c.179	p.R60Q	0.001	NULL	prints_CCSMST1	-	no_errors	C16orf91	HGNC	ENSG00000174109				19	0	0	9	7	43.75
MYH11	0	genome.wustl.edu	37	16	15831456	15831456	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	15831456	15831456	T	G	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	missense	c.3164	p.K1055T	1.000	superfamily_Prefoldin	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392				70	0	0	44	23	34.3284
SPSB3	0	genome.wustl.edu	37	16	1828472	1828472	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	1828472	1828472	G	A	SNP	SPSB3	ENST00000301717	human	ensembl	74_37	-1	known	missense	c.268	p.R90W	0.998	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_SOCS_C,pfscan_B30.2/SPRY,pfscan_SOCS_C	-	no_errors	SPSB3	HGNC	ENSG00000162032				55	0	0	28	8	22.2222
IGFALS	0	genome.wustl.edu	37	16	1842221	1842221	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	1842221	1842221	C	T	SNP	IGFALS	ENST00000568221	human	ensembl	74_37	-1	putative	missense	c.230	p.R77H	0.000	NULL	NULL	-	no_errors	IGFALS	HGNC	ENSG00000099769				35	0	0	16	7	30.4348
ABCC6P1	0	genome.wustl.edu	37	16	18584352	18584352	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	18584352	18584352	C	T	SNP	ABCC6P1	ENST00000546162	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ABCC6P1	HGNC	ENSG00000256340				19	0	0	15	8	34.7826
GPRC5B	0	genome.wustl.edu	37	16	19873222	19873222	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	19873222	19873222	G	A	SNP	GPRC5B	ENST00000537135	human	ensembl	74_37	-1	known	silent	c.1182	p.S394	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5B	HGNC	ENSG00000167191				81	0	0	68	22	24.4444
TSC2	0	genome.wustl.edu	37	16	2110801	2110801	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	2110801	2110801	T	G	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.1106	p.L369R	0.996	pfam_Tuberin_N,superfamily_ARM-type_fold,prints_Tuberin	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197				51	0	0	47	16	25.3968
USP31	0	genome.wustl.edu	37	16	23080765	23080765	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	23080765	23080765	C	T	SNP	USP31	ENST00000219689	human	ensembl	74_37	-1	known	silent	c.2661	p.S887	0.902	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP31	HGNC	ENSG00000103404				47	0	0	21	20	48.7805
PALB2	0	genome.wustl.edu	37	16	23641345	23641345	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	23641345	23641345	C	T	SNP	PALB2	ENST00000261584	human	ensembl	74_37	-1	known	silent	c.2130	p.T710	0.000	NULL	superfamily_WD40_repeat_dom	-	no_errors	PALB2	HGNC	ENSG00000083093				65	0	0	82	21	20.3883
ARHGAP17	0	genome.wustl.edu	37	16	24971014	24971014	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	24971014	24971014	G	A	SNP	ARHGAP17	ENST00000289968	human	ensembl	74_37	-1	known	silent	c.702	p.L234	1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP17	HGNC	ENSG00000140750				56	0	0	36	7	16.2791
TBC1D24	0	genome.wustl.edu	37	16	2546177	2546177	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	2546177	2546177	G	A	SNP	TBC1D24	ENST00000293970	human	ensembl	74_37	+1	known	missense	c.28	p.V10M	1.000	NULL	pfam_TLDc,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,smart_TLDc	-	no_errors	TBC1D24	HGNC	ENSG00000162065				119	0	0	101	36	26.2774
GTF3C1	0	genome.wustl.edu	37	16	27540017	27540017	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	27540017	27540017	C	T	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	missense	c.875	p.R292H	1.000	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235				172	0	0	153	48	23.8806
KIAA0556	0	genome.wustl.edu	37	16	27789260	27789260	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	27789260	27789260	G	A	SNP	KIAA0556	ENST00000261588	human	ensembl	74_37	+1	known	missense	c.4771	p.A1591T	0.105	NULL	superfamily_Thaumatin	-	no_errors	KIAA0556	HGNC	ENSG00000047578				75	0	0	44	23	34.3284
SNX29P2	0	genome.wustl.edu	37	16	29323826	29323826	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	29323826	29323826	G	A	SNP	SNX29P2	ENST00000398878	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNX29P2	HGNC	ENSG00000198106				20	0	0	9	4	30.7692
MAZ	0	genome.wustl.edu	37	16	29821441	29821441	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	29821441	29821441	G	A	SNP	MAZ	ENST00000563402	human	ensembl	74_37	+1	novel	missense	c.292	p.G98S	0.234	NULL	NULL	-	no_errors	MAZ	HGNC	ENSG00000103495				55	0	0	24	17	41.4634
TAOK2	0	genome.wustl.edu	37	16	29994071	29994071	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	29994071	29994071	G	A	SNP	TAOK2	ENST00000308893	human	ensembl	74_37	+1	known	missense	c.848	p.R283Q	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK2	HGNC	ENSG00000149930				81	0	0	78	22	22
PAQR4	0	genome.wustl.edu	37	16	3021803	3021803	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	3021803	3021803	G	A	SNP	PAQR4	ENST00000318782	human	ensembl	74_37	+1	known	missense	c.676	p.E226K	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR4	HGNC	ENSG00000162073				62	0	0	37	6	13.9535
ITGAL	0	genome.wustl.edu	37	16	30507871	30507871	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	30507871	30507871	C	T	SNP	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	nonsense	c.1816	p.Q606*	0.731	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844				58	0	0	41	18	30.5085
STX4	0	genome.wustl.edu	37	16	31046335	31046335	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	31046335	31046335	G	A	SNP	STX4	ENST00000313843	human	ensembl	74_37	+1	known	missense	c.352	p.V118I	0.551	pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N	pfam_Syntaxin_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX4	HGNC	ENSG00000103496				125	0	0	83	37	30.8333
PRSS53	0	genome.wustl.edu	37	16	31095543	31095543	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	31095543	31095543	C	T	SNP	PRSS53	ENST00000280606	human	ensembl	74_37	-1	known	silent	c.1539	p.A513	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS53	HGNC	ENSG00000151006				20	0	0	13	3	18.75
VKORC1	0	genome.wustl.edu	37	16	31104662	31104662	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	31104662	31104662	C	G	SNP	VKORC1	ENST00000394975	human	ensembl	74_37	-1	known	missense	c.254	p.C85S	1.000	pfam_VKOR,smart_VKOR	pfam_VKOR,smart_VKOR	-	no_errors	VKORC1	HGNC	ENSG00000167397				102	0	0	69	14	16.8675
HERC2P4	0	genome.wustl.edu	37	16	32164210	32164210	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	32164210	32164210	C	T	SNP	HERC2P4	ENST00000563904	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P4	HGNC	ENSG00000230267				72	0	0	72	9	11.1111
OR2C1	0	genome.wustl.edu	37	16	3406271	3406271	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	3406271	3406271	G	A	SNP	OR2C1	ENST00000304936	human	ensembl	74_37	+1	known	missense	c.331	p.E111K	0.505	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2C1	HGNC	ENSG00000168158				49	0	0	50	12	19.3548
ZNF174	0	genome.wustl.edu	37	16	3452239	3452239	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	3452239	3452239	C	T	SNP	ZNF174	ENST00000268655	human	ensembl	74_37	+1	known	silent	c.235	p.L79	0.998	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF174	HGNC	ENSG00000103343				154	0	0	92	29	23.9669
TFAP4	0	genome.wustl.edu	37	16	4310529	4310529	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	4310529	4310529	T	A	SNP	TFAP4	ENST00000204517	human	ensembl	74_37	-1	known	missense	c.593	p.Q198L	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFAP4	HGNC	ENSG00000090447				33	0	0	15	10	40
TFAP4	0	genome.wustl.edu	37	16	4310532	4310532	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	4310532	4310532	A	T	SNP	TFAP4	ENST00000204517	human	ensembl	74_37	-1	known	missense	c.590	p.L197Q	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFAP4	HGNC	ENSG00000090447				35	0	0	16	10	38.4615
ABCC11	0	genome.wustl.edu	37	16	48210854	48210854	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	48210854	48210854	G	A	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	silent	c.3519	p.I1173	0.998	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270				29	0	0	15	10	40
UBN1	0	genome.wustl.edu	37	16	4920883	4920883	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	4920883	4920883	G	A	SNP	UBN1	ENST00000262376	human	ensembl	74_37	+1	known	missense	c.1469	p.R490Q	1.000	NULL	NULL	-	no_errors	UBN1	HGNC	ENSG00000118900				67	0	0	42	20	32.2581
ADCY7	0	genome.wustl.edu	37	16	50345665	50345665	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	50345665	50345665	T	C	SNP	ADCY7	ENST00000254235	human	ensembl	74_37	+1	known	missense	c.2416	p.F806L	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY7	HGNC	ENSG00000121281				168	0	0	119	36	23.2258
BRD7	0	genome.wustl.edu	37	16	50388379	50388379	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	50388379	50388379	G	A	SNP	BRD7	ENST00000394689	human	ensembl	74_37	-1	known	missense	c.403	p.P135S	1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_DUF3512,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	BRD7	HGNC	ENSG00000166164				35	0	0	35	10	22.2222
NOD2	0	genome.wustl.edu	37	16	50745609	50745609	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	50745609	50745609	C	T	SNP	NOD2	ENST00000300589	human	ensembl	74_37	+1	known	missense	c.1787	p.T596M	0.000	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD2	HGNC	ENSG00000167207				31	0	0	20	5	20
NOD2	0	genome.wustl.edu	37	16	50745900	50745900	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	50745900	50745900	G	A	SNP	NOD2	ENST00000300589	human	ensembl	74_37	+1	known	missense	c.2078	p.C693Y	1.000	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD2	HGNC	ENSG00000167207				70	0	0	34	15	30.6122
SALL1	0	genome.wustl.edu	37	16	51174602	51174602	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	51174602	51174602	A	G	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	missense	c.1531	p.Y511H	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449				122	0	0	88	23	20.7207
SALL1	0	genome.wustl.edu	37	16	51175655	51175655	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	51175655	51175655	C	T	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	missense	c.478	p.G160S	0.005	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449				59	0	0	57	18	24
MMP2	0	genome.wustl.edu	37	16	55516934	55516934	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	55516934	55516934	T	C	SNP	MMP2	ENST00000219070	human	ensembl	74_37	+1	known	silent	c.267	p.L89	0.713	pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP2	HGNC	ENSG00000087245				130	0	0	99	24	19.5122
CES5A	0	genome.wustl.edu	37	16	55907848	55907848	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	55907848	55907848	C	T	SNP	CES5A	ENST00000521992	human	ensembl	74_37	-1	known	missense	c.262	p.G88R	0.997	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES5A	HGNC	ENSG00000159398				52	0	0	25	13	34.2105
ZNF319	0	genome.wustl.edu	37	16	58030556	58030556	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	58030556	58030556	G	A	SNP	ZNF319	ENST00000299237	human	ensembl	74_37	-1	known	silent	c.1614	p.R538	0.001	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF319	HGNC	ENSG00000166188				43	0	0	29	12	29.2683
SLC38A7	0	genome.wustl.edu	37	16	58706109	58706109	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	58706109	58706109	G	A	SNP	SLC38A7	ENST00000219320	human	ensembl	74_37	-1	known	missense	c.922	p.P308S	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	-	no_errors	SLC38A7	HGNC	ENSG00000103042				13	0	0	9	2	18.1818
NOL3	0	genome.wustl.edu	37	16	67208145	67208145	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	67208145	67208145	G	A	SNP	NOL3	ENST00000568146	human	ensembl	74_37	+1	known	missense	c.73	p.A25T	0.000	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pfscan_CARD	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pfscan_CARD	-	no_errors	NOL3	HGNC	ENSG00000140939				30	0	0	17	12	41.3793
PSKH1	0	genome.wustl.edu	37	16	67961375	67961375	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	67961375	67961375	C	T	SNP	PSKH1	ENST00000291041	human	ensembl	74_37	+1	known	missense	c.1105	p.R369C	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PSKH1	HGNC	ENSG00000159792				135	0	0	61	26	29.8851
CLEC18C	0	genome.wustl.edu	37	16	70219800	70219800	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	70219800	70219800	C	T	SNP	CLEC18C	ENST00000314151	human	ensembl	74_37	+1	known	silent	c.1224	p.C408	0.971	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_CAP_domain,superfamily_CAP_domain,superfamily_C-type_lectin_fold,smart_Allrgn_V5/Tpx1,smart_EG-like_dom,smart_C-type_lectin,prints_Allrgn_V5/Tpx1,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CLEC18C	HGNC	ENSG00000157335				91	0	0	66	8	10.8108
DHODH	0	genome.wustl.edu	37	16	72055072	72055072	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	72055072	72055072	C	T	SNP	DHODH	ENST00000219240	human	ensembl	74_37	+1	known	silent	c.567	p.D189	0.938	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	-	no_errors	DHODH	HGNC	ENSG00000102967				15	0	0	18	10	35.7143
HPR	0	genome.wustl.edu	37	16	72110827	72110827	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	72110827	72110827	C	T	SNP	HPR	ENST00000228226	human	ensembl	74_37	+1	known	silent	c.1005	p.G335	0.997	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	HPR	HGNC	ENSG00000261701				133	0	0	89	34	27.6423
DHX38	0	genome.wustl.edu	37	16	72131672	72131672	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	72131672	72131672	G	A	SNP	DHX38	ENST00000268482	human	ensembl	74_37	+1	known	missense	c.608	p.R203Q	0.998	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX38	HGNC	ENSG00000140829				24	0	0	13	7	35
RHBDL1	0	genome.wustl.edu	37	16	727934	727934	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	727934	727934	G	A	SNP	RHBDL1	ENST00000219551	human	ensembl	74_37	+1	known	missense	c.1199	p.R400Q	1.000	pirsf_Peptidase_S54_rhomboid_met	pfam_Peptidase_S54_rhomboid_dom,pirsf_Peptidase_S54_rhomboid_met	-	no_errors	RHBDL1	HGNC	ENSG00000103269				36	0	0	23	10	30.303
WDR24	0	genome.wustl.edu	37	16	736817	736817	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	736817	736817	G	A	SNP	WDR24	ENST00000248142	human	ensembl	74_37	-1	known	missense	c.1649	p.A550V	0.466	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR24	HGNC	ENSG00000127580				54	0	0	31	6	16.2162
CHST5	0	genome.wustl.edu	37	16	75563424	75563424	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	75563424	75563424	G	A	SNP	CHST5	ENST00000541075	human	ensembl	74_37	-1	known	missense	c.877	p.R293C	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST5	HGNC	ENSG00000135702				141	0	0	98	32	24.6154
TERF2IP	0	genome.wustl.edu	37	16	75681914	75681914	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	75681914	75681914	T	C	SNP	TERF2IP	ENST00000300086	human	ensembl	74_37	+1	known	missense	c.134	p.L45P	1.000	superfamily_BRCT_dom	pfam_Rap1_Myb_dom,superfamily_Homeodomain-like,superfamily_BRCT_dom	-	no_errors	TERF2IP	HGNC	ENSG00000166848				39	0	0	35	15	30
CHTF18	0	genome.wustl.edu	37	16	839683	839683	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	839683	839683	C	A	SNP	CHTF18	ENST00000317063	human	ensembl	74_37	+1	known	missense	c.1165	p.L389M	0.737	NULL	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	CHTF18	HGNC	ENSG00000127586				41	0	0	28	2	6.66667
MBTPS1	0	genome.wustl.edu	37	16	84132786	84132786	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	84132786	84132786	G	T	SNP	MBTPS1	ENST00000343411	human	ensembl	74_37	-1	known	missense	c.293	p.P98H	1.000	NULL	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	MBTPS1	HGNC	ENSG00000140943				106	0	0	78	17	17.8947
FBXO31	0	genome.wustl.edu	37	16	87393913	87393913	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	87393913	87393913	C	T	SNP	FBXO31	ENST00000311635	human	ensembl	74_37	-1	known	missense	c.400	p.V134I	1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO31	HGNC	ENSG00000103264				47	0	0	32	12	27.2727
JPH3	0	genome.wustl.edu	37	16	87678559	87678559	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	87678559	87678559	C	T	SNP	JPH3	ENST00000284262	human	ensembl	74_37	+1	known	missense	c.1078	p.R360C	1.000	pirsf_Junctophilin	pirsf_Junctophilin,pfam_MORN,smart_MORN	-	no_errors	JPH3	HGNC	ENSG00000154118				45	0	0	44	21	32.3077
ZNF778	0	genome.wustl.edu	37	16	89294382	89294382	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	89294382	89294382	A	G	SNP	ZNF778	ENST00000433976	human	ensembl	74_37	+1	known	missense	c.1602	p.I534M	0.591	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF778	HGNC	ENSG00000170100				72	0	0	53	30	36.1446
CPNE7	0	genome.wustl.edu	37	16	89644042	89644042	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	89644042	89644042	C	T	SNP	CPNE7	ENST00000268720	human	ensembl	74_37	+1	known	silent	c.270	p.R90	0.780	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE7	HGNC	ENSG00000178773				13	0	0	7	5	41.6667
VPS9D1	0	genome.wustl.edu	37	16	89776997	89776997	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	89776997	89776997	C	T	SNP	VPS9D1	ENST00000389386	human	ensembl	74_37	-1	known	missense	c.1255	p.V419I	0.006	NULL	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	-	no_errors	VPS9D1	HGNC	ENSG00000075399				33	0	0	26	11	29.7297
MC1R	0	genome.wustl.edu	37	16	89986352	89986352	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	89986352	89986352	G	A	SNP	MC1R	ENST00000555147	human	ensembl	74_37	+1	known	missense	c.686	p.R229H	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_MSH_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_MSH_rcpt,prints_Melcrt_ACTH_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC1R	HGNC	ENSG00000258839				65	0	0	45	14	23.7288
GAS8	0	genome.wustl.edu	37	16	90106801	90106801	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	90106801	90106801	C	T	SNP	GAS8	ENST00000268699	human	ensembl	74_37	+1	known	missense	c.1105	p.R369C	1.000	NULL	NULL	-	no_errors	GAS8	HGNC	ENSG00000141013				24	0	0	22	10	31.25
DNAH9	0	genome.wustl.edu	37	17	11597638	11597638	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	11597638	11597638	A	T	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.4746	p.R1582S	0.949	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				60	0	0	46	15	24.5902
DNAH9	0	genome.wustl.edu	37	17	11607737	11607737	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	11607737	11607737	T	C	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.5369	p.V1790A	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				59	0	0	59	17	22.3684
DNAH9	0	genome.wustl.edu	37	17	11833395	11833395	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	11833395	11833395	G	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	silent	c.12090	p.L4030	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				50	0	0	41	5	10.8696
ZNF18	0	genome.wustl.edu	37	17	11896029	11896029	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	11896029	11896029	C	T	SNP	ZNF18	ENST00000322748	human	ensembl	74_37	-1	known	missense	c.118	p.A40T	0.090	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF18	HGNC	ENSG00000154957				97	0	0	82	18	18
ARHGAP44	0	genome.wustl.edu	37	17	12847430	12847430	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	12847430	12847430	C	T	SNP	ARHGAP44	ENST00000379672	human	ensembl	74_37	+1	known	missense	c.778	p.H260Y	1.000	superfamily_Rho_GTPase_activation_prot,pfscan_RhoGAP_dom	pfam_BAR_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP44	HGNC	ENSG00000006740				44	0	0	37	13	26
COX10	0	genome.wustl.edu	37	17	14110514	14110514	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	14110514	14110514	G	T	SNP	COX10	ENST00000261643	human	ensembl	74_37	+1	known	missense	c.1316	p.G439V	0.000	pirsf_Protohaem_IX_farnesylTrfase_mt	pfam_UbiA_prenyltransferase,pirsf_Protohaem_IX_farnesylTrfase_mt,tigrfam_Protohaem_IX_farnesylTrfase	-	no_errors	COX10	HGNC	ENSG00000006695				34	0	0	23	10	30.303
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				50	0	0	88	13	12.8713
PRPF8	0	genome.wustl.edu	37	17	1559716	1559716	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	1559716	1559716	G	A	SNP	PRPF8	ENST00000304992	human	ensembl	74_37	-1	known	silent	c.5763	p.D1921	0.999	pfam_PRP8_domainIV	pfam_PROCN,pfam_PRP8_domainIV,pfam_Prp8_U6-snRNA-bd,pfam_PRO8NT,pfam_Prp8_U5-snRNA-bd,pfam_PROCT,pfam_RRM_spliceosomal_PrP8,pfam_JAB_MPN_dom,superfamily_Cupredoxin,superfamily_Histone-fold,smart_JAB_MPN_dom	-	no_errors	PRPF8	HGNC	ENSG00000174231				114	0	0	126	29	18.7097
RAI1	0	genome.wustl.edu	37	17	17699623	17699623	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	17699623	17699623	A	G	SNP	RAI1	ENST00000353383	human	ensembl	74_37	+1	known	missense	c.3361	p.S1121G	0.897	NULL	smart_Znf_PHD	-	no_errors	RAI1	HGNC	ENSG00000108557				67	0	0	39	20	33.8983
DRG2	0	genome.wustl.edu	37	17	18004893	18004893	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	18004893	18004893	C	T	SNP	DRG2	ENST00000225729	human	ensembl	74_37	+1	known	missense	c.718	p.P240S	1.000	superfamily_P-loop_NTPase	pfam_TGS,pfam_GTP_binding_domain,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,superfamily_TGS-like,prints_GTP_binding_domain,tigrfam_Small_GTP-bd_dom	-	no_errors	DRG2	HGNC	ENSG00000108591				61	0	0	44	16	26.6667
HIC1	0	genome.wustl.edu	37	17	1961160	1961160	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	1961160	1961160	G	A	SNP	HIC1	ENST00000322941	human	ensembl	74_37	+1	known	silent	c.1233	p.P411	0.611	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	HIC1	HGNC	ENSG00000177374				13	0	0	12	3	20
SMG6	0	genome.wustl.edu	37	17	2139842	2139842	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	2139842	2139842	C	T	SNP	SMG6	ENST00000263073	human	ensembl	74_37	-1	known	missense	c.2813	p.R938H	1.000	NULL	pfam_EST1,smart_PIN_dom	-	no_errors	SMG6	HGNC	ENSG00000070366				84	0	0	74	12	13.9535
ALDOC	0	genome.wustl.edu	37	17	26900838	26900838	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	26900838	26900838	G	A	SNP	ALDOC	ENST00000226253	human	ensembl	74_37	-1	known	missense	c.914	p.A305V	1.000	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOC	HGNC	ENSG00000109107				141	0	0	100	49	32.8859
KIAA0100	0	genome.wustl.edu	37	17	26943948	26943948	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	26943948	26943948	G	A	SNP	KIAA0100	ENST00000528896	human	ensembl	74_37	-1	known	missense	c.5980	p.R1994W	1.000	pfam_FMP27_C	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202				32	0	0	26	9	25.7143
KIAA0100	0	genome.wustl.edu	37	17	26961787	26961787	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	26961787	26961787	G	A	SNP	KIAA0100	ENST00000528896	human	ensembl	74_37	-1	known	missense	c.2818	p.R940C	1.000	NULL	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202				219	0	0	174	51	22.6667
PHF12	0	genome.wustl.edu	37	17	27240131	27240131	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	27240131	27240131	T	C	SNP	PHF12	ENST00000332830	human	ensembl	74_37	-1	known	silent	c.1458	p.T486	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_SMAD_FHA_domain,smart_Znf_PHD,pfscan_FHA_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF12	HGNC	ENSG00000109118				122	0	0	97	32	24.8062
SEZ6	0	genome.wustl.edu	37	17	27308950	27308950	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	27308950	27308950	C	T	SNP	SEZ6	ENST00000317338	human	ensembl	74_37	-1	known	missense	c.163	p.V55I	0.028	NULL	pfam_Sushi_SCR_CCP,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_CUB_dom,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6	HGNC	ENSG00000063015				32	0	0	31	11	26.1905
COPRS	0	genome.wustl.edu	37	17	30180010	30180010	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	30180010	30180010	C	T	SNP	COPRS	ENST00000302362	human	ensembl	74_37	-1	known	missense	c.206	p.R69Q	0.000	NULL	NULL	-	no_errors	COPRS	HGNC	ENSG00000172301				247	0	0	175	60	25.5319
UTP6	0	genome.wustl.edu	37	17	30213045	30213045	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	30213045	30213045	G	A	SNP	UTP6	ENST00000261708	human	ensembl	74_37	-1	known	silent	c.657	p.G219	0.014	NULL	pfam_U3_snoRNA_assoc-6,smart_HAT	-	no_errors	UTP6	HGNC	ENSG00000108651				47	0	0	49	19	27.9412
TMEM132E	0	genome.wustl.edu	37	17	32908129	32908129	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	32908129	32908129	G	A	SNP	TMEM132E	ENST00000321639	human	ensembl	74_37	+1	known	missense	c.34	p.A12T	1.000	NULL	NULL	-	no_errors	TMEM132E	HGNC	ENSG00000181291				15	0	0	8	4	33.3333
SLFN11	0	genome.wustl.edu	37	17	33690360	33690360	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	33690360	33690360	C	T	SNP	SLFN11	ENST00000308377	human	ensembl	74_37	-1	known	missense	c.467	p.R156K	0.008	NULL	pfam_ATPase_AAA-4,pfam_DUF2075,superfamily_P-loop_NTPase	-	no_errors	SLFN11	HGNC	ENSG00000172716				106	0	0	81	22	21.3592
GAS2L2	0	genome.wustl.edu	37	17	34074067	34074067	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	34074067	34074067	C	T	SNP	GAS2L2	ENST00000254466	human	ensembl	74_37	-1	known	silent	c.1053	p.T351	0.000	NULL	pfam_GAS2_dom,pfam_CH-domain,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_GAS2_dom,pfscan_CH-domain	-	no_errors	GAS2L2	HGNC	ENSG00000132139				72	0	0	57	26	31.3253
TRPV3	0	genome.wustl.edu	37	17	3448468	3448468	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	3448468	3448468	G	A	SNP	TRPV3	ENST00000301365	human	ensembl	74_37	-1	known	missense	c.217	p.R73W	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	-	no_errors	TRPV3	HGNC	ENSG00000167723				65	0	0	53	19	26.3889
LHX1	0	genome.wustl.edu	37	17	35298007	35298007	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	35298007	35298007	G	A	SNP	LHX1	ENST00000254457	human	ensembl	74_37	+1	known	silent	c.498	p.A166	0.998	superfamily_Homeodomain-like	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX1	HGNC	ENSG00000132130				86	0	0	62	16	20.5128
SYNRG	0	genome.wustl.edu	37	17	35902432	35902432	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	35902432	35902432	C	T	SNP	SYNRG	ENST00000339208	human	ensembl	74_37	-1	known	silent	c.2844	p.T948	0.000	NULL	smart_EPS15_homology,pfscan_EPS15_homology	-	no_errors	SYNRG	HGNC	ENSG00000006114				101	0	0	65	18	21.6867
GSG2	0	genome.wustl.edu	37	17	3629191	3629191	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	3629191	3629191	C	T	SNP	GSG2	ENST00000325418	human	ensembl	74_37	+1	known	silent	c.1962	p.N654	0.711	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_DUF3635,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	GSG2	HGNC	ENSG00000177602				98	0	0	84	27	24.3243
GPR179	0	genome.wustl.edu	37	17	36486853	36486853	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	36486853	36486853	T	A	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	nonsense	c.2599	p.K867*	0.001	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888				15	0	0	19	7	26.9231
MED24	0	genome.wustl.edu	37	17	38182512	38182512	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	38182512	38182512	C	T	SNP	MED24	ENST00000394128	human	ensembl	74_37	-1	known	missense	c.1882	p.V628I	1.000	pfam_Mediator_Med24_N	pfam_Mediator_Med24_N	-	no_errors	MED24	HGNC	ENSG00000008838				150	0	0	129	42	24.5614
ATP2A3	0	genome.wustl.edu	37	17	3831309	3831309	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	3831309	3831309	C	T	SNP	ATP2A3	ENST00000397039	human	ensembl	74_37	-1	known	missense	c.556	p.A186T	0.000	NULL	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	ATP2A3	HGNC	ENSG00000074370				63	0	0	46	9	16.3636
JUP	0	genome.wustl.edu	37	17	39923746	39923746	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	39923746	39923746	C	T	SNP	JUP	ENST00000310706	human	ensembl	74_37	-1	known	missense	c.794	p.R265H	1.000	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	-	no_errors	JUP	HGNC	ENSG00000173801				92	0	0	64	20	23.8095
DHX58	0	genome.wustl.edu	37	17	40255769	40255769	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	40255769	40255769	T	C	SNP	DHX58	ENST00000251642	human	ensembl	74_37	-1	known	silent	c.1611	p.A537	0.000	NULL	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX58	HGNC	ENSG00000108771				80	0	0	67	22	24.7191
KAT2A	0	genome.wustl.edu	37	17	40265758	40265758	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	40265758	40265758	T	C	SNP	KAT2A	ENST00000225916	human	ensembl	74_37	-1	known	missense	c.2423	p.N808S	1.000	pirsf_Hist_acetylase_PCAF,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom,prints_Bromodomain	-	no_errors	KAT2A	HGNC	ENSG00000108773				72	0	0	51	19	27.1429
RAB5C	0	genome.wustl.edu	37	17	40282409	40282409	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	40282409	40282409	C	T	SNP	RAB5C	ENST00000346213	human	ensembl	74_37	-1	known	missense	c.112	p.V38I	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB5C	HGNC	ENSG00000108774				97	0	0	61	21	25.6098
ANKFY1	0	genome.wustl.edu	37	17	4075853	4075853	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	4075853	4075853	G	A	SNP	ANKFY1	ENST00000570535	human	ensembl	74_37	-1	known	missense	c.3263	p.T1088M	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Znf_FYVE,pfam_BTB_POZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_BTB/POZ_fold,superfamily_Znf_FYVE_PHD,smart_BTB/POZ-like,smart_Ankyrin_rpt,smart_Znf_FYVE,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like,pfscan_Znf_FYVE-rel,prints_Ankyrin_rpt	-	no_errors	ANKFY1	HGNC	ENSG00000185722				83	0	0	71	18	20.2247
WNK4	0	genome.wustl.edu	37	17	40936457	40936457	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	40936457	40936457	G	C	SNP	WNK4	ENST00000246914	human	ensembl	74_37	+1	known	missense	c.1030	p.A344P	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK4	HGNC	ENSG00000126562				39	0	0	27	11	28.9474
MEOX1	0	genome.wustl.edu	37	17	41720878	41720878	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	41720878	41720878	T	C	SNP	MEOX1	ENST00000318579	human	ensembl	74_37	-1	known	missense	c.620	p.N207S	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	MEOX1	HGNC	ENSG00000005102				15	0	0	11	6	35.2941
EFTUD2	0	genome.wustl.edu	37	17	42937314	42937314	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	42937314	42937314	G	T	SNP	EFTUD2	ENST00000426333	human	ensembl	74_37	-1	known	missense	c.1819	p.L607M	1.000	superfamily_EFG_III-V	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EFTUD2	HGNC	ENSG00000108883				114	0	0	103	20	16.2602
KIF18B	0	genome.wustl.edu	37	17	43006324	43006324	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	43006324	43006324	G	A	SNP	KIF18B	ENST00000339151	human	ensembl	74_37	-1	known	missense	c.1622	p.T541M	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF18B	HGNC	ENSG00000186185				60	0	0	45	13	22.4138
PLCD3	0	genome.wustl.edu	37	17	43198673	43198673	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	43198673	43198673	C	T	SNP	PLCD3	ENST00000322765	human	ensembl	74_37	-1	known	missense	c.230	p.R77H	0.042	smart_Pleckstrin_homology	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD3	HGNC	ENSG00000161714				17	0	0	14	3	17.6471
WNT3	0	genome.wustl.edu	37	17	44847269	44847269	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	44847269	44847269	G	A	SNP	WNT3	ENST00000225512	human	ensembl	74_37	-1	known	silent	c.468	p.G156	0.601	pfam_Wnt,smart_Wnt,prints_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt3	-	no_errors	WNT3	HGNC	ENSG00000108379				55	0	0	34	17	33.3333
HOXB8	0	genome.wustl.edu	37	17	46691692	46691692	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	46691692	46691692	G	A	SNP	HOXB8	ENST00000239144	human	ensembl	74_37	-1	known	silent	c.375	p.S125	0.812	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_HTH_motif	-	no_errors	HOXB8	HGNC	ENSG00000120068				44	0	0	29	12	29.2683
TM4SF5	0	genome.wustl.edu	37	17	4686188	4686188	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	4686188	4686188	C	T	SNP	TM4SF5	ENST00000270560	human	ensembl	74_37	+1	known	silent	c.435	p.C145	0.080	pfam_L6_membrane	pfam_L6_membrane	-	no_errors	TM4SF5	HGNC	ENSG00000142484				81	0	0	75	14	15.7303
B4GALNT2	0	genome.wustl.edu	37	17	47247085	47247085	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	47247085	47247085	G	A	SNP	B4GALNT2	ENST00000300404	human	ensembl	74_37	+1	known	missense	c.1696	p.A566T	0.010	pirsf_GM2_synthase	pfam_Glyco_trans_2,pirsf_GM2_synthase	-	no_errors	B4GALNT2	HGNC	ENSG00000167080				34	0	0	29	12	29.2683
MINK1	0	genome.wustl.edu	37	17	4787720	4787720	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	4787720	4787720	C	T	SNP	MINK1	ENST00000355280	human	ensembl	74_37	+1	known	silent	c.369	p.N123	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MINK1	HGNC	ENSG00000141503				82	0	0	48	14	22.5806
DLX3	0	genome.wustl.edu	37	17	48069029	48069029	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	48069029	48069029	G	A	SNP	DLX3	ENST00000434704	human	ensembl	74_37	-1	known	missense	c.716	p.A239V	1.000	NULL	pfam_Distal-less_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX3	HGNC	ENSG00000064195				48	0	0	35	16	31.3725
ITGA3	0	genome.wustl.edu	37	17	48154746	48154746	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	48154746	48154746	G	A	SNP	ITGA3	ENST00000320031	human	ensembl	74_37	+1	known	missense	c.2074	p.G692R	0.455	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA3	HGNC	ENSG00000005884				126	0	0	91	22	19.469
SLC25A11	0	genome.wustl.edu	37	17	4841682	4841682	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	4841682	4841682	C	T	SNP	SLC25A11	ENST00000225665	human	ensembl	74_37	-1	known	missense	c.589	p.A197T	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A11	HGNC	ENSG00000108528				115	0	0	69	21	23.3333
CACNA1G	0	genome.wustl.edu	37	17	48655834	48655834	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	48655834	48655834	G	A	SNP	CACNA1G	ENST00000359106	human	ensembl	74_37	+1	known	missense	c.2210	p.R737Q	1.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283				85	0	0	51	17	25
ANKRD40	0	genome.wustl.edu	37	17	48777241	48777241	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	48777241	48777241	A	T	SNP	ANKRD40	ENST00000285243	human	ensembl	74_37	-1	known	missense	c.297	p.D99E	0.396	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD40	HGNC	ENSG00000154945				29	0	0	33	11	25
WFIKKN2	0	genome.wustl.edu	37	17	48918270	48918270	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	48918270	48918270	C	T	SNP	WFIKKN2	ENST00000311378	human	ensembl	74_37	+1	known	missense	c.1621	p.R541C	1.000	pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,pfscan_Netrin_domain	pfam_Prot_inh_Kunz-m,pfam_Ig_I-set,pfam_Netrin_module_non-TIMP,pfam_WAP-type_4-diS_core,pfam_Kazal_dom,pfam_Ig_V-set,superfamily_TIMP-like_OB-fold,superfamily_Prot_inh_Kunz-m,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Ig_sub,smart_Ig_sub2,smart_Prot_inh_Kunz-m,pfscan_Netrin_domain,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Prot_inh_Kunz-m	-	no_errors	WFIKKN2	HGNC	ENSG00000173714				61	0	0	46	15	24.5902
COX11	0	genome.wustl.edu	37	17	53045966	53045966	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	53045966	53045966	G	T	SNP	COX11	ENST00000299335	human	ensembl	74_37	-1	known	missense	c.42	p.F14L	0.003	NULL	pfam_Cyt_c_oxidase_assmbl_CtaG,superfamily_CtaG/Cox11_dom	-	no_errors	COX11	HGNC	ENSG00000166260				194	0	0	132	46	25.8427
TMEM100	0	genome.wustl.edu	37	17	53798224	53798224	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	53798224	53798224	C	T	SNP	TMEM100	ENST00000424486	human	ensembl	74_37	-1	known	missense	c.208	p.V70M	1.000	NULL	NULL	-	no_errors	TMEM100	HGNC	ENSG00000166292				109	0	0	112	35	23.8095
AKAP1	0	genome.wustl.edu	37	17	55184399	55184399	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	55184399	55184399	C	T	SNP	AKAP1	ENST00000337714	human	ensembl	74_37	+1	known	missense	c.1574	p.S525L	0.000	NULL	pfam_Tudor,pfam_KH_dom_type_1,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	AKAP1	HGNC	ENSG00000121057				165	0	0	133	47	26.1111
BZRAP1	0	genome.wustl.edu	37	17	56386100	56386100	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	56386100	56386100	G	A	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	silent	c.4533	p.S1511	0.034	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379				36	0	0	25	10	28.5714
C17orf47	0	genome.wustl.edu	37	17	56620563	56620563	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	56620563	56620563	T	C	SNP	C17orf47	ENST00000321691	human	ensembl	74_37	-1	known	missense	c.985	p.S329G	0.000	NULL	NULL	-	no_errors	C17orf47	HGNC	ENSG00000181013				54	0	0	66	14	17.5
RNFT1	0	genome.wustl.edu	37	17	58040394	58040394	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	58040394	58040394	A	G	SNP	RNFT1	ENST00000305783	human	ensembl	74_37	-1	known	missense	c.308	p.V103A	0.938	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNFT1	HGNC	ENSG00000189050				78	0	0	65	14	17.7215
CSHL1	0	genome.wustl.edu	37	17	61987900	61987900	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	61987900	61987900	C	T	SNP	CSHL1	ENST00000346606	human	ensembl	74_37	-1	known	splice_site	c.1-1	e1-1	0.702	-	-	-	no_errors	CSHL1	HGNC	ENSG00000204414				132	0	0	76	31	28.972
TEX2	0	genome.wustl.edu	37	17	62290289	62290289	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	62290289	62290289	G	A	SNP	TEX2	ENST00000258991	human	ensembl	74_37	-1	known	missense	c.1289	p.T430M	0.001	NULL	pfam_DUF2404	-	no_errors	TEX2	HGNC	ENSG00000136478				125	0	0	85	30	26.087
CACNG1	0	genome.wustl.edu	37	17	65040940	65040940	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	65040940	65040940	G	A	SNP	CACNG1	ENST00000226021	human	ensembl	74_37	+1	known	missense	c.164	p.R55Q	1.000	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_g1su	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_g1su,prints_VDCC_gsu	-	no_errors	CACNG1	HGNC	ENSG00000108878				61	0	0	48	13	21.3115
LRRC37A16P	0	genome.wustl.edu	37	17	66141690	66141690	+	RNA	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	66141690	66141690	T	C	SNP	LRRC37A16P	ENST00000590019	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.653	-	-	-	no_errors	LRRC37A16P	HGNC	ENSG00000267023				27	0	0	26	7	21.2121
ABCA5	0	genome.wustl.edu	37	17	67287378	67287378	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	67287378	67287378	C	T	SNP	ABCA5	ENST00000392677	human	ensembl	74_37	-1	known	missense	c.1585	p.G529R	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA5	HGNC	ENSG00000154265				37	0	0	35	9	20.4545
DVL2	0	genome.wustl.edu	37	17	7132707	7132707	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	7132707	7132707	C	T	SNP	DVL2	ENST00000005340	human	ensembl	74_37	-1	known	silent	c.807	p.T269	0.171	pfam_PDZ,superfamily_PDZ,pfscan_PDZ	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_2,prints_Dishevelled_fam	-	no_errors	DVL2	HGNC	ENSG00000004975				146	0	0	83	34	29.0598
EIF5A	0	genome.wustl.edu	37	17	7214392	7214392	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	7214392	7214392	C	T	SNP	EIF5A	ENST00000336452	human	ensembl	74_37	+1	known	missense	c.311	p.P104L	1.000	superfamily_Translation_prot_SH3-like,pirsf_Transl_elong_IF5A,tigrfam_Transl_elong_IF5A	pfam_Transl_elong_IF5A_C,pfam_KOW,superfamily_Translation_prot_SH3-like,superfamily_NA-bd_OB-fold,pirsf_Transl_elong_IF5A,tigrfam_Transl_elong_IF5A	-	no_errors	EIF5A	HGNC	ENSG00000132507				27	0	0	16	2	11.1111
KIF19	0	genome.wustl.edu	37	17	72348411	72348411	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	72348411	72348411	C	T	SNP	KIF19	ENST00000389916	human	ensembl	74_37	+1	known	missense	c.1912	p.R638W	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF19	HGNC	ENSG00000196169				40	0	0	24	16	40
BTBD17	0	genome.wustl.edu	37	17	72353317	72353317	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	72353317	72353317	C	T	SNP	BTBD17	ENST00000375366	human	ensembl	74_37	-1	known	missense	c.916	p.V306I	1.000	NULL	pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD17	HGNC	ENSG00000204347				17	0	0	12	5	29.4118
KCTD11	0	genome.wustl.edu	37	17	7256302	7256302	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	7256302	7256302	C	T	SNP	KCTD11	ENST00000333751	human	ensembl	74_37	+1	known	missense	c.41	p.P14L	0.042	superfamily_BTB/POZ_fold	pfam_T1-type_BTB,superfamily_BTB/POZ_fold	-	no_errors	KCTD11	HGNC	ENSG00000213859				87	0	0	59	34	36.5591
HID1	0	genome.wustl.edu	37	17	72954478	72954478	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	72954478	72954478	G	A	SNP	HID1	ENST00000425042	human	ensembl	74_37	-1	known	missense	c.1336	p.R446C	0.974	pfam_Dymeclin	pfam_Dymeclin	-	no_errors	HID1	HGNC	ENSG00000167861				22	0	0	13	6	31.5789
CASKIN2	0	genome.wustl.edu	37	17	73502463	73502463	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	73502463	73502463	G	A	SNP	CASKIN2	ENST00000321617	human	ensembl	74_37	-1	known	missense	c.649	p.R217C	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_SH3_domain,prints_Ankyrin_rpt	-	no_errors	CASKIN2	HGNC	ENSG00000177303				77	0	0	49	14	22.2222
ITGB4	0	genome.wustl.edu	37	17	73746884	73746884	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	73746884	73746884	G	A	SNP	ITGB4	ENST00000200181	human	ensembl	74_37	+1	known	missense	c.3598	p.G1200R	1.000	pirsf_Integrin_bsu-4,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,prints_Integrin_bsu,pfscan_Fibronectin_type3	-	no_errors	ITGB4	HGNC	ENSG00000132470				121	0	0	74	43	36.7521
EVPL	0	genome.wustl.edu	37	17	74015720	74015720	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	74015720	74015720	G	A	SNP	EVPL	ENST00000301607	human	ensembl	74_37	-1	known	silent	c.1026	p.A342	0.022	NULL	pfam_Plectin_repeat,superfamily_Ferritin-like_SF,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	EVPL	HGNC	ENSG00000167880				47	0	0	48	11	18.6441
UBE2O	0	genome.wustl.edu	37	17	74401599	74401599	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	74401599	74401599	G	C	SNP	UBE2O	ENST00000319380	human	ensembl	74_37	-1	known	missense	c.473	p.S158C	0.998	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC	ENSG00000175931				13	0	0	10	3	23.0769
FXR2	0	genome.wustl.edu	37	17	7499231	7499231	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	7499231	7499231	C	T	SNP	FXR2	ENST00000250113	human	ensembl	74_37	-1	known	missense	c.742	p.G248S	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR2	HGNC	ENSG00000129245				134	0	0	114	39	25.4902
SEPT9	0	genome.wustl.edu	37	17	75483595	75483595	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	75483595	75483595	C	T	SNP	SEPT9	ENST00000427177	human	ensembl	74_37	+1	known	missense	c.1003	p.R335C	1.000	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,pfam_AIG1,superfamily_P-loop_NTPase	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	SEPT9	HGNC	ENSG00000184640				39	0	0	28	7	20
DNAH17	0	genome.wustl.edu	37	17	76565605	76565605	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	76565605	76565605	C	T	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.1049	p.R350Q	0.025	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775				14	0	0	15	4	21.0526
DNAH2	0	genome.wustl.edu	37	17	7734442	7734442	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	7734442	7734442	G	A	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	missense	c.12269	p.G4090D	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914				376	0	0	283	87	23.5135
KDM6B	0	genome.wustl.edu	37	17	7750706	7750706	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	7750706	7750706	C	G	SNP	KDM6B	ENST00000254846	human	ensembl	74_37	+1	known	missense	c.1193	p.T398S	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM6B	HGNC	ENSG00000132510				148	1	0.671141	102	23	18.4
TBC1D16	0	genome.wustl.edu	37	17	77926509	77926509	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	77926509	77926509	G	A	SNP	TBC1D16	ENST00000310924	human	ensembl	74_37	-1	known	silent	c.888	p.C296	0.890	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D16	HGNC	ENSG00000167291				50	0	0	30	10	25
RNF213	0	genome.wustl.edu	37	17	78280117	78280117	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	78280117	78280117	G	A	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.2276	p.R759Q	0.811	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821				97	0	0	88	20	18.5185
ENTHD2	0	genome.wustl.edu	37	17	79203003	79203003	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	79203003	79203003	C	T	SNP	ENTHD2	ENST00000300714	human	ensembl	74_37	-1	known	missense	c.1303	p.E435K	0.000	NULL	pfam_Epsin_dom_N,superfamily_ENTH_VHS	-	no_errors	ENTHD2	HGNC	ENSG00000167302				31	0	0	10	7	41.1765
TMEM105	0	genome.wustl.edu	37	17	79287521	79287521	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	79287521	79287521	G	A	SNP	TMEM105	ENST00000332900	human	ensembl	74_37	-1	known	missense	c.320	p.S107L	0.000	NULL	NULL	-	no_errors	TMEM105	HGNC	ENSG00000185332				115	0	0	67	27	28.7234
DUS1L	0	genome.wustl.edu	37	17	80019777	80019777	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	80019777	80019777	C	T	SNP	DUS1L	ENST00000306796	human	ensembl	74_37	-1	known	missense	c.593	p.R198Q	1.000	pfam_tRNA_hU_synthase	pfam_tRNA_hU_synthase	-	no_errors	DUS1L	HGNC	ENSG00000169718				157	0	0	104	25	19.3798
ZNF750	0	genome.wustl.edu	37	17	80789298	80789298	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	80789298	80789298	G	A	SNP	ZNF750	ENST00000269394	human	ensembl	74_37	-1	known	nonsense	c.1033	p.Q345*	0.726	NULL	NULL	-	no_errors	ZNF750	HGNC	ENSG00000141579				192	0	0	150	54	26.4706
MYH10	0	genome.wustl.edu	37	17	8396256	8396256	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	8396256	8396256	C	T	SNP	MYH10	ENST00000396239	human	ensembl	74_37	-1	known	silent	c.4266	p.A1422	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026				113	0	0	69	29	29.5918
USP43	0	genome.wustl.edu	37	17	9632150	9632150	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	9632150	9632150	T	C	SNP	USP43	ENST00000285199	human	ensembl	74_37	+1	known	missense	c.3215	p.L1072P	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP43	HGNC	ENSG00000154914				63	0	0	39	10	20.4082
ENSG00000256616	0	genome.wustl.edu	37	18	12075885	12075885	+	RNA	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	12075885	12075885	A	C	SNP	ENSG00000256616	ENST00000591780	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-815J4.6	Clone_based_vega_gene	ENSG00000256616				36	0	0	40	13	24.5283
TUBB6	0	genome.wustl.edu	37	18	12326000	12326000	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	12326000	12326000	T	C	SNP	TUBB6	ENST00000317702	human	ensembl	74_37	+1	known	silent	c.1212	p.D404	0.931	superfamily_Tub_FtsZ_C,prints_Delta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Gamma_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB6	HGNC	ENSG00000176014				249	0	0	191	64	25.098
CXADRP3	0	genome.wustl.edu	37	18	14478138	14478138	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	14478138	14478138	G	A	SNP	CXADRP3	ENST00000581457	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	CXADRP3	HGNC	ENSG00000265766				28	0	0	22	7	24.1379
POTEC	0	genome.wustl.edu	37	18	14543190	14543190	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	14543190	14543190	C	T	SNP	POTEC	ENST00000389891	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	POTEC	HGNC	ENSG00000183206				45	0	0	48	12	20
ABHD3	0	genome.wustl.edu	37	18	19263897	19263897	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	19263897	19263897	G	A	SNP	ABHD3	ENST00000289119	human	ensembl	74_37	-1	known	missense	c.539	p.A180V	0.990	pfam_AB_hydrolase_1,pirsf_AB-Hydro_YheT	pfam_AB_hydrolase_1,pirsf_AB-Hydro_YheT	-	no_errors	ABHD3	HGNC	ENSG00000158201				48	0	0	41	13	24.0741
NPC1	0	genome.wustl.edu	37	18	21123487	21123487	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	21123487	21123487	C	A	SNP	NPC1	ENST00000269228	human	ensembl	74_37	-1	known	missense	c.2177	p.R726M	1.000	pfam_Patched,pfam_MMPL_dom,pfscan_SSD,tigrfam_NP_C_type	pfam_Patched,pfam_MMPL_dom,pfscan_SSD,tigrfam_NP_C_type	-	no_errors	NPC1	HGNC	ENSG00000141458				118	0	0	112	28	20
SMCHD1	0	genome.wustl.edu	37	18	2743871	2743871	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	2743871	2743871	T	C	SNP	SMCHD1	ENST00000320876	human	ensembl	74_37	+1	known	missense	c.3746	p.L1249P	0.806	NULL	pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_HATPase_ATP-bd,smart_SMC_hinge	-	no_errors	SMCHD1	HGNC	ENSG00000101596				15	0	0	22	5	18.5185
ASXL3	0	genome.wustl.edu	37	18	31326159	31326159	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	31326159	31326159	C	T	SNP	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	missense	c.6347	p.A2116V	0.998	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431				66	0	0	60	19	24.0506
ZSCAN30	0	genome.wustl.edu	37	18	32843953	32843953	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	32843953	32843953	T	C	SNP	ZSCAN30	ENST00000333206	human	ensembl	74_37	-1	known	missense	c.364	p.M122V	0.014	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN30	HGNC	ENSG00000186814				65	0	0	48	20	29.4118
GALNT1	0	genome.wustl.edu	37	18	33243648	33243648	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	33243648	33243648	G	A	SNP	GALNT1	ENST00000269195	human	ensembl	74_37	+1	known	missense	c.196	p.V66I	0.997	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT1	HGNC	ENSG00000141429				35	0	0	43	9	17.3077
CELF4	0	genome.wustl.edu	37	18	34854292	34854292	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	34854292	34854292	G	A	SNP	CELF4	ENST00000590112	human	ensembl	74_37	-1	known	missense	c.731	p.T244M	0.991	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF4	HGNC	ENSG00000101489				127	0	0	99	30	23.2558
ZBTB7C	0	genome.wustl.edu	37	18	45555704	45555704	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	45555704	45555704	G	A	SNP	ZBTB7C	ENST00000332053	human	ensembl	74_37	-1	known	missense	c.1787	p.A596V	1.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7C	HGNC	ENSG00000184828				8	0	0	4	3	42.8571
LIPG	0	genome.wustl.edu	37	18	47095891	47095891	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	47095891	47095891	G	A	SNP	LIPG	ENST00000261292	human	ensembl	74_37	+1	known	missense	c.544	p.V182M	1.000	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH,prints_Lipo_Lipase,prints_Lipase_hep	pfam_Lipase_N,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pirsf_Lipoprotein_lipase_LIPH,pfscan_PLAT/LH2_dom,prints_Lipase,prints_Lipo_Lipase,prints_Lipase_hep	-	no_errors	LIPG	HGNC	ENSG00000101670				43	0	0	30	8	21.0526
MYO5B	0	genome.wustl.edu	37	18	47402095	47402095	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	47402095	47402095	G	A	SNP	MYO5B	ENST00000285039	human	ensembl	74_37	-1	known	silent	c.3499	p.L1167	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306				180	0	0	117	42	26.4151
MBD2	0	genome.wustl.edu	37	18	51750524	51750524	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	51750524	51750524	G	A	SNP	MBD2	ENST00000256429	human	ensembl	74_37	-1	known	missense	c.406	p.P136S	1.000	superfamily_DNA-bd_dom	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD2	HGNC	ENSG00000134046				13	0	0	16	3	15.7895
WDR7	0	genome.wustl.edu	37	18	54358982	54358982	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	54358982	54358982	G	A	SNP	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	silent	c.900	p.V300	0.990	superfamily_Quinonprotein_ADH-like_supfam	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157				18	0	0	33	9	21.4286
ONECUT2	0	genome.wustl.edu	37	18	55143924	55143924	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	55143924	55143924	C	T	SNP	ONECUT2	ENST00000491143	human	ensembl	74_37	+1	known	missense	c.1484	p.S495L	1.000	superfamily_Homeodomain-like	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	ONECUT2	HGNC	ENSG00000119547				61	0	0	48	12	20
NEDD4L	0	genome.wustl.edu	37	18	56001085	56001085	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	56001085	56001085	T	C	SNP	NEDD4L	ENST00000400345	human	ensembl	74_37	+1	known	silent	c.1026	p.S342	0.917	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom,prints_C2_dom	-	no_errors	NEDD4L	HGNC	ENSG00000049759				48	0	0	43	10	18.8679
NEDD4L	0	genome.wustl.edu	37	18	56052795	56052795	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	56052795	56052795	A	G	SNP	NEDD4L	ENST00000400345	human	ensembl	74_37	+1	known	missense	c.2464	p.K822E	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom,prints_C2_dom	-	no_errors	NEDD4L	HGNC	ENSG00000049759				80	0	0	71	15	17.4419
ZNF532	0	genome.wustl.edu	37	18	56586743	56586743	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	56586743	56586743	G	A	SNP	ZNF532	ENST00000336078	human	ensembl	74_37	+1	known	silent	c.1224	p.S408	0.323	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF532	HGNC	ENSG00000074657				44	0	0	39	13	25
SERPINB4	0	genome.wustl.edu	37	18	61305210	61305210	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	61305210	61305210	T	C	SNP	SERPINB4	ENST00000341074	human	ensembl	74_37	-1	known	missense	c.916	p.N306D	0.139	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB4	HGNC	ENSG00000206073				72	0	0	109	11	9.16667
SERPINB4	0	genome.wustl.edu	37	18	61305291	61305291	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	61305291	61305291	A	G	SNP	SERPINB4	ENST00000341074	human	ensembl	74_37	-1	known	missense	c.835	p.C279R	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB4	HGNC	ENSG00000206073				46	0	0	71	5	6.57895
SERPINB3	0	genome.wustl.edu	37	18	61323084	61323084	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	61323084	61323084	C	T	SNP	SERPINB3	ENST00000283752	human	ensembl	74_37	-1	known	missense	c.980	p.G327E	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB3	HGNC	ENSG00000057149				94	0	0	94	9	8.73786
SERPINB3	0	genome.wustl.edu	37	18	61323109	61323109	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	61323109	61323109	C	A	SNP	SERPINB3	ENST00000283752	human	ensembl	74_37	-1	known	missense	c.955	p.G319W	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB3	HGNC	ENSG00000057149				95	0	0	87	5	5.43478
DSEL	0	genome.wustl.edu	37	18	65181597	65181597	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	65181597	65181597	A	G	SNP	DSEL	ENST00000310045	human	ensembl	74_37	-1	known	silent	c.279	p.H93	1.000	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,superfamily_Chondroitin_lyas	-	no_errors	DSEL	HGNC	ENSG00000171451				56	0	0	55	16	22.5352
RTTN	0	genome.wustl.edu	37	18	67684750	67684750	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	67684750	67684750	A	G	SNP	RTTN	ENST00000255674	human	ensembl	74_37	-1	known	missense	c.6314	p.L2105P	0.915	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225				72	0	0	64	13	16.8831
ENOSF1	0	genome.wustl.edu	37	18	677834	677834	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	677834	677834	C	T	SNP	ENOSF1	ENST00000340116	human	ensembl	74_37	-1	known	silent	c.978	p.A326	0.000	NULL	pfam_Mandelate_racemase_C,pfam_Mandelate_racemase_N,smart_Mandelate_racemase_C	-	no_errors	ENOSF1	HGNC	ENSG00000132199				116	0	0	82	25	23.3645
LAMA1	0	genome.wustl.edu	37	18	6948434	6948434	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	6948434	6948434	G	A	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.8678	p.T2893I	0.999	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				57	0	0	34	11	24.4444
CNDP2	0	genome.wustl.edu	37	18	72173217	72173217	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	72173217	72173217	G	A	SNP	CNDP2	ENST00000324262	human	ensembl	74_37	+1	known	missense	c.338	p.S113N	0.993	pfam_Peptidase_M20,pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP2	HGNC	ENSG00000133313				69	0	0	55	31	36.0465
ZNF236	0	genome.wustl.edu	37	18	74561514	74561514	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	74561514	74561514	A	G	SNP	ZNF236	ENST00000253159	human	ensembl	74_37	+1	known	missense	c.82	p.N28D	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF236	HGNC	ENSG00000130856				45	0	0	41	8	16.3265
SALL3	0	genome.wustl.edu	37	18	76753350	76753350	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	76753350	76753350	C	T	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	silent	c.1359	p.C453	0.996	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				40	0	0	35	8	18.6047
SALL3	0	genome.wustl.edu	37	18	76754298	76754298	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	76754298	76754298	G	A	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	silent	c.2307	p.T769	0.994	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				62	0	0	40	12	23.0769
CTDP1	0	genome.wustl.edu	37	18	77475506	77475506	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	77475506	77475506	G	A	SNP	CTDP1	ENST00000299543	human	ensembl	74_37	+1	known	silent	c.2046	p.T682	0.715	superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pfam_FCP1_C,pfam_NIF,superfamily_HAD-like_dom,superfamily_BRCT_dom,superfamily_Single_hybrid_motif,smart_NIF,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_NIF,tigrfam_FCP1_euk	-	no_errors	CTDP1	HGNC	ENSG00000060069				10	0	0	9	4	30.7692
VAPA	0	genome.wustl.edu	37	18	9931900	9931900	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	9931900	9931900	G	A	SNP	VAPA	ENST00000340541	human	ensembl	74_37	+1	known	missense	c.173	p.R58Q	1.000	pfam_MSP_dom,superfamily_PapD-like,pirsf_Vesicle-associated_membrane,pfscan_MSP_dom	pfam_MSP_dom,superfamily_PapD-like,pirsf_Vesicle-associated_membrane,pfscan_MSP_dom	-	no_errors	VAPA	HGNC	ENSG00000101558				67	0	0	57	12	17.3913
EIF3G	0	genome.wustl.edu	37	19	10227521	10227521	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	10227521	10227521	C	T	SNP	EIF3G	ENST00000253108	human	ensembl	74_37	-1	known	missense	c.550	p.E184K	1.000	pirsf_eIF3_g	pfam_eIF3g_N,pfam_RRM_dom,smart_RRM_dom,pirsf_eIF3_g,pfscan_RRM_dom	-	no_errors	EIF3G	HGNC	ENSG00000130811				117	0	0	72	52	41.9355
ICAM5	0	genome.wustl.edu	37	19	10401749	10401749	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	10401749	10401749	G	A	SNP	ICAM5	ENST00000221980	human	ensembl	74_37	+1	known	silent	c.84	p.A28	1.000	pfam_ICAM_N	pfam_Ig_I-set,pfam_ICAM_N,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM5	HGNC	ENSG00000105376				28	0	0	13	4	23.5294
ABCA7	0	genome.wustl.edu	37	19	1043781	1043781	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	1043781	1043781	A	G	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	missense	c.988	p.M330V	0.016	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687				244	0	0	185	48	20.6009
ATG4D	0	genome.wustl.edu	37	19	10662902	10662902	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	10662902	10662902	C	T	SNP	ATG4D	ENST00000309469	human	ensembl	74_37	+1	known	missense	c.1144	p.R382C	1.000	pfam_Peptidase_C54	pfam_Peptidase_C54	-	no_errors	ATG4D	HGNC	ENSG00000130734				72	0	0	76	27	26.2136
HMHA1	0	genome.wustl.edu	37	19	1080261	1080261	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	1080261	1080261	G	A	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	missense	c.1711	p.V571I	0.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448				224	0	0	146	52	26.2626
HMHA1	0	genome.wustl.edu	37	19	1085954	1085954	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	1085954	1085954	C	T	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	silent	c.3360	p.G1120	0.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448				175	0	0	133	47	26.1111
DNM2	0	genome.wustl.edu	37	19	10893768	10893768	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	10893768	10893768	C	T	SNP	DNM2	ENST00000314646	human	ensembl	74_37	+1	known	missense	c.821	p.T274M	1.000	pfam_Dynamin_central,superfamily_P-loop_NTPase	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM2	HGNC	ENSG00000079805				82	0	0	55	15	21.4286
SMARCA4	0	genome.wustl.edu	37	19	11144498	11144498	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	11144498	11144498	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3830	p.P1277L	1.000	NULL	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				50	0	0	30	16	34.7826
ENSG00000267174	0	genome.wustl.edu	37	19	11411781	11411781	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	11411781	11411781	C	T	SNP	ENSG00000267174	ENST00000585801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTC-510F12.4	Clone_based_vega_gene	ENSG00000267174				29	0	0	16	12	42.8571
ZNF69	0	genome.wustl.edu	37	19	12016052	12016052	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	12016052	12016052	A	T	SNP	ZNF69	ENST00000429654	human	ensembl	74_37	+1	known	missense	c.840	p.Q280H	0.028	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429				61	0	0	51	21	29.1667
BEST2	0	genome.wustl.edu	37	19	12866266	12866266	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	12866266	12866266	C	T	SNP	BEST2	ENST00000042931	human	ensembl	74_37	+1	known	missense	c.710	p.T237M	1.000	pfam_Bestrophin/UPF0187	pfam_Bestrophin/UPF0187	-	no_errors	BEST2	HGNC	ENSG00000039987				53	0	0	46	17	26.9841
GCDH	0	genome.wustl.edu	37	19	13002400	13002400	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	13002400	13002400	G	T	SNP	GCDH	ENST00000590445	human	ensembl	74_37	+1	known	missense	c.191	p.W64L	0.005	NULL	NULL	-	no_errors	GCDH	HGNC	ENSG00000105607				55	0	0	45	21	31.8182
CD97	0	genome.wustl.edu	37	19	14508025	14508025	+	Silent	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	14508025	14508025	C	A	SNP	CD97	ENST00000242786	human	ensembl	74_37	+1	known	silent	c.615	p.T205	0.001	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd_dom,pfam_GPS_dom,pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_CD97,prints_GPCR_2_secretin-like,prints_GPCR_2_EMR1_rcpt	-	no_errors	CD97	HGNC	ENSG00000123146				194	0	0	135	44	24.581
PTGER1	0	genome.wustl.edu	37	19	14584277	14584277	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	14584277	14584277	G	A	SNP	PTGER1	ENST00000292513	human	ensembl	74_37	-1	known	missense	c.856	p.R286C	0.097	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_EP1_rcpt,prints_Prostanoid_rcpt,prints_Prostglndn_DP_rcpt,prints_Thbox_rcpt	-	no_errors	PTGER1	HGNC	ENSG00000160951				13	0	0	13	3	18.75
APC2	0	genome.wustl.edu	37	19	1461988	1461988	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	1461988	1461988	C	T	SNP	APC2	ENST00000233607	human	ensembl	74_37	+1	known	silent	c.1665	p.S555	0.372	superfamily_ARM-type_fold,smart_Armadillo	pfam_APC_basic_dom,pfam_APC_dom,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Armadillo	-	no_errors	APC2	HGNC	ENSG00000115266				50	0	0	39	17	30.3571
CLEC17A	0	genome.wustl.edu	37	19	14705584	14705584	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	14705584	14705584	C	T	SNP	CLEC17A	ENST00000417570	human	ensembl	74_37	+1	known	silent	c.375	p.A125	0.001	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CLEC17A	HGNC	ENSG00000187912				41	0	0	19	7	26.9231
NOTCH3	0	genome.wustl.edu	37	19	15289695	15289695	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	15289695	15289695	C	T	SNP	NOTCH3	ENST00000263388	human	ensembl	74_37	-1	known	missense	c.3776	p.G1259D	1.000	pirsf_Notch,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_3,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181				27	0	0	19	7	26.9231
BRD4	0	genome.wustl.edu	37	19	15383773	15383773	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	15383773	15383773	C	T	SNP	BRD4	ENST00000263377	human	ensembl	74_37	-1	known	silent	c.138	p.P46	0.022	superfamily_Bromodomain	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD4	HGNC	ENSG00000141867				129	0	0	111	27	19.5652
MEX3D	0	genome.wustl.edu	37	19	1556729	1556729	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	1556729	1556729	G	A	SNP	MEX3D	ENST00000388824	human	ensembl	74_37	-1	known	silent	c.789	p.A263	0.011	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3D	HGNC	ENSG00000181588				56	0	0	39	20	33.8983
CHERP	0	genome.wustl.edu	37	19	16632444	16632444	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	16632444	16632444	G	A	SNP	CHERP	ENST00000546361	human	ensembl	74_37	-1	known	missense	c.2002	p.P668S	1.000	NULL	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872				26	0	0	22	11	33.3333
MED26	0	genome.wustl.edu	37	19	16687474	16687474	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	16687474	16687474	C	T	SNP	MED26	ENST00000263390	human	ensembl	74_37	-1	known	silent	c.1167	p.S389	0.699	NULL	pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	MED26	HGNC	ENSG00000105085				43	0	0	26	4	13.3333
CPAMD8	0	genome.wustl.edu	37	19	17038989	17038989	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	17038989	17038989	G	A	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.3341	p.P1114L	0.039	pfam_Methyltransf_FA	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				58	0	0	48	18	27.2727
MYO9B	0	genome.wustl.edu	37	19	17313032	17313032	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	17313032	17313032	A	G	SNP	MYO9B	ENST00000594824	human	ensembl	74_37	+1	known	missense	c.4756	p.N1586D	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9B	HGNC	ENSG00000099331				27	0	0	22	5	18.5185
PLVAP	0	genome.wustl.edu	37	19	17476389	17476389	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	17476389	17476389	T	C	SNP	PLVAP	ENST00000252590	human	ensembl	74_37	-1	known	silent	c.885	p.E295	0.002	pfam_PV-1	pfam_PV-1	-	no_errors	PLVAP	HGNC	ENSG00000130300				45	0	0	38	15	28.3019
MAST3	0	genome.wustl.edu	37	19	18249863	18249863	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	18249863	18249863	G	A	SNP	MAST3	ENST00000262811	human	ensembl	74_37	+1	known	missense	c.2047	p.D683N	0.991	superfamily_Kinase-like_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST3	HGNC	ENSG00000099308				13	0	0	12	4	25
KLF16	0	genome.wustl.edu	37	19	1854668	1854668	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	1854668	1854668	G	A	SNP	KLF16	ENST00000250916	human	ensembl	74_37	-1	known	silent	c.549	p.G183	0.990	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF16	HGNC	ENSG00000129911				55	0	0	31	16	34.0426
KLHL26	0	genome.wustl.edu	37	19	18778859	18778859	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	18778859	18778859	C	T	SNP	KLHL26	ENST00000300976	human	ensembl	74_37	+1	known	silent	c.652	p.L218	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL26	HGNC	ENSG00000167487				96	0	0	62	28	31.1111
ARMC6	0	genome.wustl.edu	37	19	19154850	19154850	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	19154850	19154850	C	T	SNP	ARMC6	ENST00000392336	human	ensembl	74_37	+1	known	silent	c.246	p.D82	0.017	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC6	HGNC	ENSG00000105676				76	0	0	54	14	20.5882
ZNF90	0	genome.wustl.edu	37	19	20235848	20235848	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	20235848	20235848	C	T	SNP	ZNF90	ENST00000474284	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.756	-	-	-	no_errors	ZNF90	HGNC	ENSG00000213988				16	0	0	11	8	42.1053
ZNF429	0	genome.wustl.edu	37	19	21719281	21719281	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	21719281	21719281	C	T	SNP	ZNF429	ENST00000358491	human	ensembl	74_37	+1	novel	silent	c.426	p.S142	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF429	HGNC	ENSG00000197013				55	0	0	41	15	26.7857
LOC100132815	0	genome.wustl.edu	37	19	23438112	23438112	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	23438112	23438112	C	T	SNP	LOC100132815	ENST00000593576	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-15H20.5	Clone_based_vega_gene	ENSG00000269837				19	0	0	12	6	33.3333
ZNF536	0	genome.wustl.edu	37	19	30935279	30935279	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	30935279	30935279	G	A	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	silent	c.810	p.P270	0.473	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597				49	0	0	23	10	30.303
ZNF536	0	genome.wustl.edu	37	19	31038892	31038892	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	31038892	31038892	C	T	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.2366	p.T789M	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597				102	0	0	80	19	19.1919
TSHZ3	0	genome.wustl.edu	37	19	31770574	31770574	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	31770574	31770574	G	A	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	missense	c.125	p.S42L	0.941	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297				70	0	0	51	15	22.7273
RHPN2	0	genome.wustl.edu	37	19	33471104	33471104	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	33471104	33471104	A	G	SNP	RHPN2	ENST00000254260	human	ensembl	74_37	-1	known	missense	c.1859	p.L620S	1.000	NULL	pfam_BRO1_dom,pfam_HR1_rho-bd,superfamily_HR1_rho-bd,superfamily_PDZ,smart_HR1_rho-bd,smart_PDZ,pfscan_BRO1_dom	-	no_errors	RHPN2	HGNC	ENSG00000131941				93	0	0	62	21	25.3012
CHST8	0	genome.wustl.edu	37	19	34263256	34263256	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	34263256	34263256	A	G	SNP	CHST8	ENST00000262622	human	ensembl	74_37	+1	known	missense	c.563	p.D188G	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase	-	no_errors	CHST8	HGNC	ENSG00000124302				70	0	0	44	18	29.0323
KRTDAP	0	genome.wustl.edu	37	19	35979354	35979354	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	35979354	35979354	C	T	SNP	KRTDAP	ENST00000338897	human	ensembl	74_37	-1	known	missense	c.202	p.A68T	0.963	NULL	NULL	-	no_errors	KRTDAP	HGNC	ENSG00000188508				26	0	0	19	3	13.6364
RBM42	0	genome.wustl.edu	37	19	36124822	36124822	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	36124822	36124822	C	T	SNP	RBM42	ENST00000262633	human	ensembl	74_37	+1	known	silent	c.918	p.R306	0.193	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM42	HGNC	ENSG00000126254				23	0	0	19	4	17.3913
UPK1A	0	genome.wustl.edu	37	19	36159365	36159365	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	36159365	36159365	C	A	SNP	UPK1A	ENST00000379013	human	ensembl	74_37	+1	known	missense	c.94	p.L32M	1.000	pfam_Tetraspanin/Peripherin,prints_Tetraspanin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	UPK1A	HGNC	ENSG00000105668				75	0	0	60	12	16.6667
PIP5K1C	0	genome.wustl.edu	37	19	3633467	3633467	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	3633467	3633467	C	G	SNP	PIP5K1C	ENST00000335312	human	ensembl	74_37	-1	known	missense	c.1972	p.A658P	1.000	NULL	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5K1C	HGNC	ENSG00000186111				26	0	0	13	6	31.5789
WDR62	0	genome.wustl.edu	37	19	36594611	36594611	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	36594611	36594611	G	A	SNP	WDR62	ENST00000401500	human	ensembl	74_37	+1	known	missense	c.3881	p.R1294Q	0.982	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR62	HGNC	ENSG00000075702				117	0	0	87	21	19.4444
TBCB	0	genome.wustl.edu	37	19	36612466	36612466	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	36612466	36612466	C	T	SNP	TBCB	ENST00000221855	human	ensembl	74_37	+1	known	silent	c.393	p.G131	0.805	superfamily_CAP-Gly_domain	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	TBCB	HGNC	ENSG00000105254				8	0	0	6	4	40
ZNF529	0	genome.wustl.edu	37	19	37038564	37038564	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	37038564	37038564	C	T	SNP	ZNF529	ENST00000591340	human	ensembl	74_37	-1	known	missense	c.896	p.R299Q	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF529	HGNC	ENSG00000186020				107	0	0	73	30	29.1262
ZNF567	0	genome.wustl.edu	37	19	37210793	37210793	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	37210793	37210793	T	C	SNP	ZNF567	ENST00000536254	human	ensembl	74_37	+1	known	silent	c.1167	p.G389	0.097	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF567	HGNC	ENSG00000189042				55	0	0	68	13	16.0494
ZNF568	0	genome.wustl.edu	37	19	37413725	37413725	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	37413725	37413725	T	G	SNP	ZNF568	ENST00000333987	human	ensembl	74_37	+1	known	missense	c.53	p.L18W	0.003	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF568	HGNC	ENSG00000198453				42	0	0	44	18	29.0323
SIPA1L3	0	genome.wustl.edu	37	19	38590668	38590668	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	38590668	38590668	C	T	SNP	SIPA1L3	ENST00000222345	human	ensembl	74_37	+1	known	missense	c.1732	p.R578W	0.985	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L3	HGNC	ENSG00000105738				79	0	0	89	5	5.31915
GGN	0	genome.wustl.edu	37	19	38876364	38876364	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	38876364	38876364	G	A	SNP	GGN	ENST00000334928	human	ensembl	74_37	-1	known	missense	c.1538	p.A513V	0.026	NULL	NULL	-	no_errors	GGN	HGNC	ENSG00000179168				34	0	0	24	8	25
ACTN4	0	genome.wustl.edu	37	19	39214837	39214837	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	39214837	39214837	C	T	SNP	ACTN4	ENST00000252699	human	ensembl	74_37	+1	known	missense	c.1733	p.P578L	0.977	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN4	HGNC	ENSG00000130402				105	0	0	66	23	25.8427
SYCN	0	genome.wustl.edu	37	19	39694512	39694512	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	39694512	39694512	G	A	SNP	SYCN	ENST00000318438	human	ensembl	74_37	-1	known	missense	c.383	p.A128V	0.016	NULL	NULL	-	no_errors	SYCN	HGNC	ENSG00000179751				30	0	0	17	8	32
SUPT5H	0	genome.wustl.edu	37	19	39963908	39963908	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	39963908	39963908	C	T	SNP	SUPT5H	ENST00000432763	human	ensembl	74_37	+1	known	missense	c.2324	p.T775M	0.999	pirsf_TF_Spt5	pfam_TF_Spt5_NGN-domain,pfam_KOW,pfam_Spt5_N,superfamily_Translation_prot_SH3-like,smart_Transcrpt_antiterm_NusG_N_dom,smart_KOW,pirsf_TF_Spt5	-	no_errors	SUPT5H	HGNC	ENSG00000196235				112	0	0	82	32	28.0702
DYRK1B	0	genome.wustl.edu	37	19	40317449	40317449	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	40317449	40317449	G	A	SNP	DYRK1B	ENST00000323039	human	ensembl	74_37	-1	known	missense	c.1274	p.A425V	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1B	HGNC	ENSG00000105204				14	0	0	3	6	66.6667
FCGBP	0	genome.wustl.edu	37	19	40366367	40366367	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	40366367	40366367	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.13867	p.D4623N	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920				111	0	0	76	29	27.619
FCGBP	0	genome.wustl.edu	37	19	40398355	40398355	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	40398355	40398355	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	silent	c.6612	p.A2204	0.992	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920				222	0	0	225	28	11.0672
FCGBP	0	genome.wustl.edu	37	19	40421324	40421324	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	40421324	40421324	C	A	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.2597	p.G866V	0.116	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920				22	0	0	18	5	21.7391
BLVRB	0	genome.wustl.edu	37	19	40953837	40953837	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	40953837	40953837	A	G	SNP	BLVRB	ENST00000263368	human	ensembl	74_37	-1	known	missense	c.580	p.Y194H	1.000	NULL	pfam_NmrA,pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase	-	no_errors	BLVRB	HGNC	ENSG00000090013				63	0	0	63	4	5.97015
CYP2B7P1	0	genome.wustl.edu	37	19	41455038	41455038	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	41455038	41455038	G	A	SNP	CYP2B7P1	ENST00000599198	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CYP2B7P1	HGNC	ENSG00000256612				37	0	0	37	18	32.7273
CIC	0	genome.wustl.edu	37	19	42791355	42791355	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	42791355	42791355	C	T	SNP	CIC	ENST00000575354	human	ensembl	74_37	+1	known	missense	c.415	p.R139W	0.981	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				42	0	0	25	7	21.875
LIPE	0	genome.wustl.edu	37	19	42930555	42930555	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	42930555	42930555	C	T	SNP	LIPE	ENST00000244289	human	ensembl	74_37	-1	known	silent	c.747	p.T249	0.000	NULL	pfam_HSL_N,pfam_AB_hydrolase_3,pfam_Steryl_acetyl_hydrolase	-	no_errors	LIPE	HGNC	ENSG00000079435				92	0	0	62	25	28.7356
IRGC	0	genome.wustl.edu	37	19	44223311	44223311	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	44223311	44223311	C	T	SNP	IRGC	ENST00000244314	human	ensembl	74_37	+1	known	missense	c.601	p.R201W	0.025	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	-	no_errors	IRGC	HGNC	ENSG00000124449				63	0	0	54	17	23.9437
IRGC	0	genome.wustl.edu	37	19	44223343	44223343	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	44223343	44223343	C	T	SNP	IRGC	ENST00000244314	human	ensembl	74_37	+1	known	silent	c.633	p.R211	0.004	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	-	no_errors	IRGC	HGNC	ENSG00000124449				52	0	0	45	9	16.6667
ZNF227	0	genome.wustl.edu	37	19	44740715	44740715	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	44740715	44740715	C	T	SNP	ZNF227	ENST00000313040	human	ensembl	74_37	+1	known	missense	c.2132	p.T711M	0.983	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF227	HGNC	ENSG00000131115				89	0	0	102	26	20.3125
ZNF229	0	genome.wustl.edu	37	19	44933212	44933212	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	44933212	44933212	G	A	SNP	ZNF229	ENST00000588931	human	ensembl	74_37	-1	known	missense	c.1744	p.R582W	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF229	HGNC	ENSG00000167383				90	0	0	68	19	21.8391
ZNF229	0	genome.wustl.edu	37	19	44946745	44946745	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	44946745	44946745	A	G	SNP	ZNF229	ENST00000588931	human	ensembl	74_37	-1	known	splice_site	c.93+2	e2+2	0.873	-	-	-	no_errors	ZNF229	HGNC	ENSG00000167383				76	0	0	62	21	25.3012
ENSG00000205790	0	genome.wustl.edu	37	19	4682900	4682900	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	4682900	4682900	C	T	SNP	ENSG00000205790	ENST00000381796	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC005594.3	Clone_based_vega_gene	ENSG00000205790				11	0	0	6	3	33.3333
STRN4	0	genome.wustl.edu	37	19	47236438	47236438	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	47236438	47236438	C	T	SNP	STRN4	ENST00000391910	human	ensembl	74_37	-1	known	missense	c.595	p.V199I	1.000	NULL	pfam_WD40_repeat,pfam_Striatin_N,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	STRN4	HGNC	ENSG00000090372				42	0	0	34	7	17.0732
DHX34	0	genome.wustl.edu	37	19	47858522	47858522	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	47858522	47858522	C	T	SNP	DHX34	ENST00000328771	human	ensembl	74_37	+1	known	missense	c.932	p.S311L	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX34	HGNC	ENSG00000134815				192	0	0	133	34	20.3593
SLC8A2	0	genome.wustl.edu	37	19	47951360	47951360	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	47951360	47951360	G	A	SNP	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	missense	c.1469	p.A490V	1.000	tigrfam_Na_Ca_Ex	pfam_Calx_beta,pfam_NaCa_Exmemb,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A2	HGNC	ENSG00000118160				22	0	0	24	4	14.2857
LIG1	0	genome.wustl.edu	37	19	48640806	48640806	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	48640806	48640806	G	A	SNP	LIG1	ENST00000542460	human	ensembl	74_37	-1	known	missense	c.1202	p.A401V	0.008	NULL	pfam_DNA_ligase_ATP-dep_N,superfamily_DNA_ligase_ATP-dep_N	-	no_errors	LIG1	HGNC	ENSG00000105486				59	0	0	38	15	28.3019
LMTK3	0	genome.wustl.edu	37	19	49001867	49001867	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	49001867	49001867	C	T	SNP	LMTK3	ENST00000270238	human	ensembl	74_37	-1	known	missense	c.2546	p.R849Q	0.994	smart_Ser/Thr_dual-sp_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC	ENSG00000142235				8	0	0	4	3	42.8571
SPHK2	0	genome.wustl.edu	37	19	49129478	49129478	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	49129478	49129478	C	T	SNP	SPHK2	ENST00000443164	human	ensembl	74_37	+1	known	missense	c.556	p.R186W	1.000	NULL	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	SPHK2	HGNC	ENSG00000063176				35	0	0	20	6	23.0769
FUT1	0	genome.wustl.edu	37	19	49253765	49253765	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	49253765	49253765	G	A	SNP	FUT1	ENST00000310160	human	ensembl	74_37	-1	known	silent	c.774	p.F258	1.000	pfam_Glyco_trans_11	pfam_Glyco_trans_11	-	no_errors	FUT1	HGNC	ENSG00000174951				184	0	0	109	43	28.2895
HRC	0	genome.wustl.edu	37	19	49657751	49657751	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	49657751	49657751	A	G	SNP	HRC	ENST00000252825	human	ensembl	74_37	-1	known	silent	c.744	p.D248	0.877	pfam_Hist_rich_Ca-bd	pfam_Hist_rich_Ca-bd	-	no_errors	HRC	HGNC	ENSG00000130528				32	0	0	11	10	47.619
FLT3LG	0	genome.wustl.edu	37	19	49983624	49983624	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	49983624	49983624	C	T	SNP	FLT3LG	ENST00000594009	human	ensembl	74_37	+1	known	missense	c.551	p.P184L	0.000	NULL	pfam_Flt3_lig,superfamily_4_helix_cytokine-like_core	-	no_errors	FLT3LG	HGNC	ENSG00000090554				29	0	0	15	5	25
FCGRT	0	genome.wustl.edu	37	19	50027778	50027778	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50027778	50027778	C	T	SNP	FCGRT	ENST00000221466	human	ensembl	74_37	+1	known	missense	c.616	p.R206C	1.000	pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	FCGRT	HGNC	ENSG00000104870				79	0	0	60	18	23.0769
PRR12	0	genome.wustl.edu	37	19	50098868	50098868	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50098868	50098868	G	A	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	missense	c.1276	p.A426T	0.973	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464				23	0	0	11	3	21.4286
PRMT1	0	genome.wustl.edu	37	19	50183169	50183169	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50183169	50183169	C	T	SNP	PRMT1	ENST00000454376	human	ensembl	74_37	+1	known	missense	c.77	p.P26L	1.000	NULL	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_Small_mtfrase_dom,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT1	HGNC	ENSG00000126457				18	0	0	11	5	31.25
TSKS	0	genome.wustl.edu	37	19	50243410	50243410	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50243410	50243410	C	T	SNP	TSKS	ENST00000246801	human	ensembl	74_37	-1	known	missense	c.1528	p.V510I	1.000	NULL	NULL	-	no_errors	TSKS	HGNC	ENSG00000126467				97	0	0	74	20	21.2766
AP2A1	0	genome.wustl.edu	37	19	50303257	50303257	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50303257	50303257	C	T	SNP	AP2A1	ENST00000354293	human	ensembl	74_37	+1	known	silent	c.1305	p.Y435	0.986	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP2_complex_asu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a-adaptin_app_sub_C,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP2_complex_asu	-	no_errors	AP2A1	HGNC	ENSG00000196961				72	0	0	55	21	27.6316
PNKP	0	genome.wustl.edu	37	19	50365981	50365981	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50365981	50365981	C	T	SNP	PNKP	ENST00000322344	human	ensembl	74_37	-1	known	silent	c.831	p.T277	0.762	pfam_PNK3P,superfamily_HAD-like_dom,tigrfam_PNK_3Pase_met,tigrfam_Polynucleotide_phosphatase,tigrfam_HAD-SF_hydro_IIIA	pfam_PNK3P,superfamily_HAD-like_dom,superfamily_SMAD_FHA_domain,superfamily_P-loop_NTPase,tigrfam_PNK_3Pase_met,tigrfam_Polynucleotide_phosphatase,tigrfam_HAD-SF_hydro_IIIA	-	no_errors	PNKP	HGNC	ENSG00000039650				84	0	0	54	17	23.9437
MYH14	0	genome.wustl.edu	37	19	50764740	50764740	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50764740	50764740	G	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	silent	c.2433	p.A811	0.998	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357				61	0	0	36	11	23.4043
MYBPC2	0	genome.wustl.edu	37	19	50949190	50949190	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50949190	50949190	G	A	SNP	MYBPC2	ENST00000357701	human	ensembl	74_37	+1	known	missense	c.1187	p.R396H	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC2	HGNC	ENSG00000086967				23	0	0	14	5	26.3158
MYBPC2	0	genome.wustl.edu	37	19	50957558	50957558	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50957558	50957558	C	T	SNP	MYBPC2	ENST00000357701	human	ensembl	74_37	+1	known	missense	c.1946	p.S649L	0.378	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC2	HGNC	ENSG00000086967				56	0	0	41	10	19.6078
LRRC4B	0	genome.wustl.edu	37	19	51021575	51021575	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	51021575	51021575	G	A	SNP	LRRC4B	ENST00000389201	human	ensembl	74_37	-1	known	silent	c.1395	p.G465	0.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4B	HGNC	ENSG00000131409				41	0	0	27	6	18.1818
SIGLEC10	0	genome.wustl.edu	37	19	51919202	51919202	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	51919202	51919202	G	A	SNP	SIGLEC10	ENST00000339313	human	ensembl	74_37	-1	known	missense	c.974	p.A325V	0.583	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC10	HGNC	ENSG00000142512				133	0	0	90	30	25
ZNF649	0	genome.wustl.edu	37	19	52394795	52394795	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	52394795	52394795	T	G	SNP	ZNF649	ENST00000354957	human	ensembl	74_37	-1	known	missense	c.594	p.R198S	0.019	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF649	HGNC	ENSG00000198093				115	0	0	89	32	26.4463
ZNF615	0	genome.wustl.edu	37	19	52496837	52496837	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	52496837	52496837	G	T	SNP	ZNF615	ENST00000594083	human	ensembl	74_37	-1	known	missense	c.1525	p.R509S	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF615	HGNC	ENSG00000197619				61	0	0	44	14	24.1379
PPP2R1A	0	genome.wustl.edu	37	19	52716018	52716018	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	52716018	52716018	G	A	SNP	PPP2R1A	ENST00000322088	human	ensembl	74_37	+1	known	missense	c.583	p.V195M	1.000	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1A	HGNC	ENSG00000105568				135	0	0	86	29	25.2174
ZNF766	0	genome.wustl.edu	37	19	52794058	52794058	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	52794058	52794058	G	A	SNP	ZNF766	ENST00000359102	human	ensembl	74_37	+1	known	silent	c.1059	p.G353	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF766	HGNC	ENSG00000196214				35	0	0	25	7	21.875
ZNF534	0	genome.wustl.edu	37	19	52954604	52954604	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	52954604	52954604	G	A	SNP	ZNF534	ENST00000301085	human	ensembl	74_37	+1	putative	missense	c.436	p.D146N	0.005	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF534	HGNC	ENSG00000198633				13	0	0	3	4	57.1429
ZNRF4	0	genome.wustl.edu	37	19	5456475	5456475	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	5456475	5456475	C	A	SNP	ZNRF4	ENST00000222033	human	ensembl	74_37	+1	known	missense	c.973	p.L325M	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF4	HGNC	ENSG00000105428				153	0	0	101	29	22.3077
LILRB3	0	genome.wustl.edu	37	19	54725110	54725110	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	54725110	54725110	C	T	SNP	LILRB3	ENST00000407860	human	ensembl	74_37	-1	known	missense	c.800	p.R267H	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB3	HGNC	ENSG00000204577				39	0	0	14	25	64.1026
LILRB3	0	genome.wustl.edu	37	19	54745900	54745900	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	54745900	54745900	A	G	SNP	LILRB3	ENST00000407860	human	ensembl	74_37	-1	known	splice_site	c.355+2	e3+2	1.000	-	-	-	no_errors	LILRB3	HGNC	ENSG00000204577				226	1	0.440529	189	35	15.625
TNNT1	0	genome.wustl.edu	37	19	55656925	55656925	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	55656925	55656925	G	A	SNP	TNNT1	ENST00000588981	human	ensembl	74_37	-1	known	missense	c.115	p.R39C	1.000	NULL	pfam_Troponin	-	no_errors	TNNT1	HGNC	ENSG00000105048				234	0	0	179	67	27.2358
TNNI3	0	genome.wustl.edu	37	19	55665463	55665463	+	Silent	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	55665463	55665463	G	T	SNP	TNNI3	ENST00000344887	human	ensembl	74_37	-1	known	silent	c.484	p.R162	1.000	pfam_Troponin	pfam_Troponin,pfam_Troponin-I_N	-	no_errors	TNNI3	HGNC	ENSG00000129991				97	0	0	79	20	20.202
DNAAF3	0	genome.wustl.edu	37	19	55677303	55677303	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	55677303	55677303	G	T	SNP	DNAAF3	ENST00000527223	human	ensembl	74_37	-1	known	missense	c.355	p.L119I	0.999	NULL	NULL	-	no_errors	DNAAF3	HGNC	ENSG00000167646				43	0	0	37	9	19.5652
NLRP4	0	genome.wustl.edu	37	19	56369147	56369147	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	56369147	56369147	G	T	SNP	NLRP4	ENST00000301295	human	ensembl	74_37	+1	known	nonsense	c.388	p.E130*	0.001	superfamily_P-loop_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505				106	0	0	89	19	17.5926
ZNF787	0	genome.wustl.edu	37	19	56600281	56600281	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	56600281	56600281	G	A	SNP	ZNF787	ENST00000270459	human	ensembl	74_37	-1	known	missense	c.260	p.T87M	0.997	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF787	HGNC	ENSG00000142409				47	0	0	29	7	19.4444
ZNF667	0	genome.wustl.edu	37	19	56953519	56953519	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	56953519	56953519	T	C	SNP	ZNF667	ENST00000342634	human	ensembl	74_37	-1	known	missense	c.1229	p.K410R	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF667	HGNC	ENSG00000198046				55	0	0	44	21	32.3077
ZNF667	0	genome.wustl.edu	37	19	56969605	56969605	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	56969605	56969605	G	A	SNP	ZNF667	ENST00000342634	human	ensembl	74_37	-1	known	missense	c.451	p.R151W	0.914	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF667	HGNC	ENSG00000198046				35	0	0	30	7	18.9189
ZNF835	0	genome.wustl.edu	37	19	57175988	57175988	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	57175988	57175988	C	T	SNP	ZNF835	ENST00000537055	human	ensembl	74_37	-1	known	silent	c.579	p.P193	0.782	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF835	HGNC	ENSG00000127903				46	0	0	35	9	20.4545
DUXA	0	genome.wustl.edu	37	19	57670628	57670628	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	57670628	57670628	T	C	SNP	DUXA	ENST00000554048	human	ensembl	74_37	-1	known	missense	c.199	p.R67G	0.997	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	DUXA	HGNC	ENSG00000258873				58	0	0	49	20	28.9855
AURKC	0	genome.wustl.edu	37	19	57743929	57743929	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	57743929	57743929	C	T	SNP	AURKC	ENST00000302804	human	ensembl	74_37	+1	known	silent	c.316	p.L106	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AURKC	HGNC	ENSG00000105146				72	0	0	62	14	18.4211
ZNF419	0	genome.wustl.edu	37	19	58004734	58004734	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	58004734	58004734	G	A	SNP	ZNF419	ENST00000424930	human	ensembl	74_37	+1	known	missense	c.812	p.R271H	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF419	HGNC	ENSG00000105136				92	0	0	76	32	29.6296
ZNF606	0	genome.wustl.edu	37	19	58490108	58490108	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	58490108	58490108	G	A	SNP	ZNF606	ENST00000341164	human	ensembl	74_37	-1	known	missense	c.1940	p.T647I	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF606	HGNC	ENSG00000166704				67	0	0	66	19	22.3529
C3	0	genome.wustl.edu	37	19	6697683	6697683	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	6697683	6697683	G	A	SNP	C3	ENST00000245907	human	ensembl	74_37	-1	known	missense	c.2563	p.R855W	0.839	pfam_Macroglobln_a2	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730				76	0	0	69	10	12.6582
PNPLA6	0	genome.wustl.edu	37	19	7616251	7616251	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	7616251	7616251	G	A	SNP	PNPLA6	ENST00000414982	human	ensembl	74_37	+1	known	missense	c.2215	p.V739M	1.000	superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA6	HGNC	ENSG00000032444				66	0	0	58	16	21.6216
RETN	0	genome.wustl.edu	37	19	7735136	7735136	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	7735136	7735136	C	T	SNP	RETN	ENST00000221515	human	ensembl	74_37	+1	known	silent	c.228	p.S76	0.014	pfam_Resistin,superfamily_Resistin	pfam_Resistin,superfamily_Resistin	-	no_errors	RETN	HGNC	ENSG00000104918				28	0	0	24	7	22.5806
FCER2	0	genome.wustl.edu	37	19	7754212	7754212	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	7754212	7754212	C	T	SNP	FCER2	ENST00000346664	human	ensembl	74_37	-1	known	missense	c.833	p.G278D	0.148	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	FCER2	HGNC	ENSG00000104921				31	0	0	23	6	20.6897
LPPR3	0	genome.wustl.edu	37	19	813080	813080	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	813080	813080	C	T	SNP	LPPR3	ENST00000359894	human	ensembl	74_37	-1	known	silent	c.1731	p.P577	0.000	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR3	Uniprot_gn	ENSG00000129951				13	0	0	13	5	27.7778
LPPR3	0	genome.wustl.edu	37	19	813181	813181	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	813181	813181	G	A	SNP	LPPR3	ENST00000359894	human	ensembl	74_37	-1	known	missense	c.1630	p.R544C	0.794	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR3	Uniprot_gn	ENSG00000129951				17	0	0	11	3	21.4286
AZU1	0	genome.wustl.edu	37	19	830738	830738	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	830738	830738	G	A	SNP	AZU1	ENST00000233997	human	ensembl	74_37	+1	known	missense	c.391	p.V131M	0.015	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	AZU1	HGNC	ENSG00000172232				46	0	0	45	9	16.6667
CERS4	0	genome.wustl.edu	37	19	8326866	8326866	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	8326866	8326866	C	A	SNP	CERS4	ENST00000251363	human	ensembl	74_37	+1	known	missense	c.1058	p.A353E	0.114	pirsf_Longevity_assurance_LAG1_LAC1	pfam_TLC-dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom,pfscan_Homeobox_dom	-	no_errors	CERS4	HGNC	ENSG00000090661				57	0	0	30	20	40
MUC16	0	genome.wustl.edu	37	19	9015691	9015691	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	9015691	9015691	T	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.38132	p.K12711T	0.000	pfam_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				188	0	0	122	44	26.506
OR7G2	0	genome.wustl.edu	37	19	9213230	9213230	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	9213230	9213230	T	C	SNP	OR7G2	ENST00000305456	human	ensembl	74_37	-1	known	silent	c.753	p.S251	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7G2	HGNC	ENSG00000170923				87	0	0	73	21	22.3404
ZNF812	0	genome.wustl.edu	37	19	9804416	9804416	+	Silent	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	9804416	9804416	G	T	SNP	ZNF812	ENST00000457674	human	ensembl	74_37	-1	novel	silent	c.195	p.L65	0.012	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF812	HGNC	ENSG00000224689				25	0	0	25	8	24.2424
FBXL12	0	genome.wustl.edu	37	19	9922074	9922074	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	9922074	9922074	C	T	SNP	FBXL12	ENST00000247977	human	ensembl	74_37	-1	known	missense	c.479	p.R160H	0.815	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXL12	HGNC	ENSG00000127452				95	0	0	72	17	19.1011
OLFM2	0	genome.wustl.edu	37	19	9965426	9965426	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	9965426	9965426	C	T	SNP	OLFM2	ENST00000264833	human	ensembl	74_37	-1	known	silent	c.801	p.A267	0.172	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,pfam_Noelin-1,superfamily_Quinonprotein_ADH-like_supfam,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFM2	HGNC	ENSG00000105088				34	0	0	22	8	26.6667
SLC9A2	0	genome.wustl.edu	37	2	103324619	103324619	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	103324619	103324619	G	A	SNP	SLC9A2	ENST00000233969	human	ensembl	74_37	+1	known	missense	c.2110	p.V704M	0.959	prints_Na/H_exchanger_2	pfam_Cation/H_exchanger,prints_Na/H_exchanger_2,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A2	HGNC	ENSG00000115616				136	0	0	105	31	22.7941
GPR45	0	genome.wustl.edu	37	2	105858638	105858638	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	105858638	105858638	G	A	SNP	GPR45	ENST00000258456	human	ensembl	74_37	+1	known	missense	c.323	p.R108H	0.988	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR45	HGNC	ENSG00000135973				137	0	0	87	29	25
TGFBRAP1	0	genome.wustl.edu	37	2	105915130	105915130	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	105915130	105915130	G	A	SNP	TGFBRAP1	ENST00000258449	human	ensembl	74_37	-1	known	missense	c.721	p.R241C	1.000	pfam_Citron	pfam_VPS39/TGF_beta_rcpt-assoc_2,pfam_VPS39/TGF_beta_rcpt-assoc_1,pfam_Clathrin_H-chain/VPS_repeat,pfam_Citron	-	no_errors	TGFBRAP1	HGNC	ENSG00000135966				51	0	0	46	15	24.5902
UXS1	0	genome.wustl.edu	37	2	106729102	106729102	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	106729102	106729102	C	T	SNP	UXS1	ENST00000283148	human	ensembl	74_37	-1	known	silent	c.879	p.T293	0.971	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct	pfam_Epimerase_deHydtase,pfam_UXS1_N,pfam_dTDP_dehydrorham_reduct,pfam_Male_sterile_NAD-bd,pfam_3Beta_OHSteriod_DH/Estase	-	no_errors	UXS1	HGNC	ENSG00000115652				26	0	0	27	4	12.9032
EDAR	0	genome.wustl.edu	37	2	109524435	109524435	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	109524435	109524435	G	A	SNP	EDAR	ENST00000376651	human	ensembl	74_37	-1	known	missense	c.940	p.R314W	1.000	NULL	pfam_Death_domain,superfamily_DEATH-like_dom	-	no_errors	EDAR	HGNC	ENSG00000135960				47	0	0	32	14	30.4348
EDAR	0	genome.wustl.edu	37	2	109527333	109527333	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	109527333	109527333	C	T	SNP	EDAR	ENST00000376651	human	ensembl	74_37	-1	known	missense	c.725	p.G242D	0.000	NULL	pfam_Death_domain,superfamily_DEATH-like_dom	-	no_errors	EDAR	HGNC	ENSG00000135960				53	0	0	46	14	23.3333
SH3RF3	0	genome.wustl.edu	37	2	110015266	110015266	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	110015266	110015266	A	G	SNP	SH3RF3	ENST00000309415	human	ensembl	74_37	+1	known	missense	c.1166	p.H389R	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Znf_RING,smart_SH3_domain,prints_p67phox,pfscan_SH3_domain,pfscan_Znf_RING	-	no_errors	SH3RF3	HGNC	ENSG00000172985				44	0	0	21	9	30
MALL	0	genome.wustl.edu	37	2	110849255	110849255	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	110849255	110849255	C	T	SNP	MALL	ENST00000424988	human	ensembl	74_37	-1	known	missense	c.304	p.V102I	0.484	NULL	NULL	-	no_errors	MALL	HGNC	ENSG00000144063				91	0	0	100	21	17.3554
FOXD4L1	0	genome.wustl.edu	37	2	114256835	114256835	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	114256835	114256835	T	C	SNP	FOXD4L1	ENST00000306507	human	ensembl	74_37	+1	known	missense	c.2	p.M1T	0.998	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD4L1	HGNC	ENSG00000184492				40	0	0	40	10	20
EPB41L5	0	genome.wustl.edu	37	2	120776745	120776745	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	120776745	120776745	G	A	SNP	EPB41L5	ENST00000263713	human	ensembl	74_37	+1	known	missense	c.85	p.A29T	1.000	NULL	pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L5	HGNC	ENSG00000115109				331	0	0	273	101	27.0053
INHBB	0	genome.wustl.edu	37	2	121104098	121104098	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	121104098	121104098	G	A	SNP	INHBB	ENST00000295228	human	ensembl	74_37	+1	known	missense	c.334	p.A112T	1.000	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaB,prints_Inhibin_asu	-	no_errors	INHBB	HGNC	ENSG00000163083				15	0	0	14	5	26.3158
MAP3K2	0	genome.wustl.edu	37	2	128072426	128072426	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	128072426	128072426	C	T	SNP	MAP3K2	ENST00000344908	human	ensembl	74_37	-1	known	missense	c.1360	p.A454T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K2	HGNC	ENSG00000169967				20	0	0	14	3	17.6471
MYO7B	0	genome.wustl.edu	37	2	128347770	128347770	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	128347770	128347770	G	A	SNP	MYO7B	ENST00000389524	human	ensembl	74_37	+1	known	missense	c.1958	p.R653H	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7B	HGNC	ENSG00000169994				34	0	0	26	10	27.7778
MYO7B	0	genome.wustl.edu	37	2	128389313	128389313	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	128389313	128389313	C	T	SNP	MYO7B	ENST00000389524	human	ensembl	74_37	+1	known	missense	c.5159	p.T1720M	0.999	pfam_MyTH4_dom,smart_MyTH4_dom,pfscan_MyTH4_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7B	HGNC	ENSG00000169994				54	0	0	30	11	26.8293
WDR33	0	genome.wustl.edu	37	2	128479496	128479496	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	128479496	128479496	T	C	SNP	WDR33	ENST00000322313	human	ensembl	74_37	-1	known	missense	c.1585	p.I529V	1.000	NULL	pfam_WD40_repeat,pfam_Collagen,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR33	HGNC	ENSG00000136709				53	0	0	44	17	27.8689
SAP130	0	genome.wustl.edu	37	2	128750820	128750820	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	128750820	128750820	A	G	SNP	SAP130	ENST00000357702	human	ensembl	74_37	-1	known	missense	c.1496	p.L499P	1.000	NULL	NULL	-	no_errors	SAP130	HGNC	ENSG00000136715				124	0	0	104	26	20
CCDC74B	0	genome.wustl.edu	37	2	130898808	130898808	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	130898808	130898808	C	A	SNP	CCDC74B	ENST00000392984	human	ensembl	74_37	-1	known	missense	c.912	p.Q304H	0.005	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076				184	1	0.540541	164	33	16.7513
TUBA3D	0	genome.wustl.edu	37	2	132237756	132237756	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	132237756	132237756	A	G	SNP	TUBA3D	ENST00000321253	human	ensembl	74_37	+1	known	missense	c.490	p.K164E	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Alpha_tubulin,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3D	HGNC	ENSG00000075886				173	0	0	137	49	26.3441
GPR39	0	genome.wustl.edu	37	2	133174763	133174763	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	133174763	133174763	G	A	SNP	GPR39	ENST00000329321	human	ensembl	74_37	+1	known	missense	c.148	p.A50T	0.989	pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR39	HGNC	ENSG00000183840				75	0	0	60	11	15.493
R3HDM1	0	genome.wustl.edu	37	2	136481617	136481617	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	136481617	136481617	C	T	SNP	R3HDM1	ENST00000264160	human	ensembl	74_37	+1	known	missense	c.3055	p.R1019W	1.000	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	R3HDM1	HGNC	ENSG00000048991				98	0	0	88	30	25.4237
TPO	0	genome.wustl.edu	37	2	1426892	1426892	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	1426892	1426892	C	T	SNP	TPO	ENST00000329066	human	ensembl	74_37	+1	known	missense	c.170	p.T57M	0.004	NULL	pfam_Haem_peroxidase_animal,pfam_EGF-like_Ca-bd_dom,superfamily_Haem_peroxidase,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	TPO	HGNC	ENSG00000115705				47	0	0	40	9	18.3673
ARHGAP15	0	genome.wustl.edu	37	2	144461010	144461010	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	144461010	144461010	A	G	SNP	ARHGAP15	ENST00000295095	human	ensembl	74_37	+1	known	silent	c.1161	p.R387	0.994	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP15	HGNC	ENSG00000075884				32	0	0	47	11	18.9655
FMNL2	0	genome.wustl.edu	37	2	153483215	153483215	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	153483215	153483215	T	C	SNP	FMNL2	ENST00000288670	human	ensembl	74_37	+1	known	silent	c.2139	p.A713	0.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin,prints_Wilms_tumour	-	no_errors	FMNL2	HGNC	ENSG00000157827				15	0	0	20	4	16.6667
RPRM	0	genome.wustl.edu	37	2	154334877	154334877	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	154334877	154334877	G	A	SNP	RPRM	ENST00000325926	human	ensembl	74_37	-1	known	missense	c.203	p.T68I	1.000	NULL	NULL	-	no_errors	RPRM	HGNC	ENSG00000177519				62	0	0	46	19	29.2308
KCNJ3	0	genome.wustl.edu	37	2	155555952	155555952	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	155555952	155555952	A	G	SNP	KCNJ3	ENST00000295101	human	ensembl	74_37	+1	known	missense	c.665	p.H222R	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.1,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ3	HGNC	ENSG00000162989				32	0	0	25	5	16.6667
DDX1	0	genome.wustl.edu	37	2	15742747	15742747	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	15742747	15742747	T	C	SNP	DDX1	ENST00000233084	human	ensembl	74_37	+1	known	missense	c.383	p.L128S	0.259	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_ConA-like_lec_gl_sf,smart_Helicase_ATP-bd,pfscan_B30.2/SPRY	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_SPRY_rcpt,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_ConA-like_lec_gl_sf,smart_Helicase_ATP-bd,smart_SPla/RYanodine_receptor_subgr,smart_Helicase_C,pfscan_B30.2/SPRY,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX1	HGNC	ENSG00000079785				41	0	0	34	12	26.087
UPP2	0	genome.wustl.edu	37	2	158980286	158980286	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	158980286	158980286	G	A	SNP	UPP2	ENST00000409859	human	ensembl	74_37	+1	known	silent	c.861	p.L287	0.792	pfam_Nucleoside_phosphorylase_d,tigrfam_Uridine_phosphorylase_euk	pfam_Nucleoside_phosphorylase_d,tigrfam_Uridine_phosphorylase_euk	-	no_errors	UPP2	HGNC	ENSG00000007001				40	0	0	42	11	20.7547
TANK	0	genome.wustl.edu	37	2	162036309	162036309	+	RNA	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	162036309	162036309	T	C	SNP	TANK	ENST00000463502	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.006	-	-	-	no_errors	TANK	HGNC	ENSG00000136560				21	0	0	23	5	17.8571
SCN1A	0	genome.wustl.edu	37	2	166859078	166859078	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	166859078	166859078	G	A	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	silent	c.4188	p.C1396	0.907	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285				55	0	0	50	15	23.0769
LRP2	0	genome.wustl.edu	37	2	170127418	170127418	+	Silent	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	170127418	170127418	G	C	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	silent	c.2316	p.G772	0.992	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				53	0	0	33	13	28.2609
HAT1	0	genome.wustl.edu	37	2	172823000	172823000	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	172823000	172823000	T	C	SNP	HAT1	ENST00000264108	human	ensembl	74_37	+1	known	missense	c.682	p.Y228H	1.000	superfamily_Acyl_CoA_acyltransferase,pirsf_Hist_AcTrfase_B-typ_cat-su	pfam_Hat1_N,superfamily_Acyl_CoA_acyltransferase,pirsf_Hist_AcTrfase_B-typ_cat-su	-	no_errors	HAT1	HGNC	ENSG00000128708				74	0	0	66	23	25.8427
ITGA6	0	genome.wustl.edu	37	2	173344453	173344453	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	173344453	173344453	G	A	SNP	ITGA6	ENST00000264106	human	ensembl	74_37	+1	known	silent	c.1590	p.A530	0.150	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA6	HGNC	ENSG00000091409				136	0	0	134	41	23.4286
HOXD10	0	genome.wustl.edu	37	2	176973579	176973579	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	176973579	176973579	G	A	SNP	HOXD10	ENST00000490088	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.143	-	-	-	no_errors	HOXD10	HGNC	ENSG00000128710				13	0	0	6	15	71.4286
HOXD1	0	genome.wustl.edu	37	2	177053951	177053951	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	177053951	177053951	C	T	SNP	HOXD1	ENST00000331462	human	ensembl	74_37	+1	known	missense	c.422	p.S141L	0.980	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXD1	HGNC	ENSG00000128645				11	0	0	14	3	17.6471
PDE11A	0	genome.wustl.edu	37	2	178494158	178494158	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	178494158	178494158	C	T	SNP	PDE11A	ENST00000286063	human	ensembl	74_37	-1	known	missense	c.2779	p.V927I	0.006	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE11A	HGNC	ENSG00000128655				122	0	0	97	33	25.3846
OSBPL6	0	genome.wustl.edu	37	2	179201048	179201048	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	179201048	179201048	G	A	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	silent	c.615	p.P205	0.003	NULL	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156				193	0	0	171	43	20.0935
TTN	0	genome.wustl.edu	37	2	179401890	179401890	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	179401890	179401890	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.92242	p.A30748T	0.870	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				29	0	0	32	5	13.5135
TTN	0	genome.wustl.edu	37	2	179433099	179433099	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	179433099	179433099	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.70056	p.G23352	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				43	0	0	28	10	26.3158
TTN	0	genome.wustl.edu	37	2	179455353	179455353	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	179455353	179455353	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.53395	p.R17799W	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				96	0	0	66	27	29.0323
TTN	0	genome.wustl.edu	37	2	179463995	179463995	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	179463995	179463995	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.48821	p.C16274Y	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				98	0	0	97	36	27.0677
TTN	0	genome.wustl.edu	37	2	179479340	179479340	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	179479340	179479340	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	nonsense	c.41197	p.Q13733*	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				41	0	0	23	18	43.9024
NEUROD1	0	genome.wustl.edu	37	2	182543335	182543335	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	182543335	182543335	C	T	SNP	NEUROD1	ENST00000295108	human	ensembl	74_37	-1	known	missense	c.253	p.G85S	1.000	pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD1	HGNC	ENSG00000162992				33	0	0	29	4	12.1212
DNAJC10	0	genome.wustl.edu	37	2	183616508	183616508	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	183616508	183616508	C	T	SNP	DNAJC10	ENST00000264065	human	ensembl	74_37	+1	known	missense	c.1430	p.A477V	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,pirsf_DnaJ_homolog_subfam-C	pfam_Thioredoxin_domain,pfam_DnaJ_domain,superfamily_Thioredoxin-like_fold,superfamily_DnaJ_domain,smart_DnaJ_domain,pirsf_DnaJ_homolog_subfam-C,pfscan_DnaJ_domain,prints_DnaJ_domain,prints_Thioredoxin	-	no_errors	DNAJC10	HGNC	ENSG00000077232				166	0	0	151	14	8.48485
NCKAP1	0	genome.wustl.edu	37	2	183826904	183826904	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	183826904	183826904	A	G	SNP	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	missense	c.1882	p.C628R	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1	-	no_errors	NCKAP1	HGNC	ENSG00000061676				54	0	0	45	12	21.0526
FSIP2	0	genome.wustl.edu	37	2	186671387	186671387	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	186671387	186671387	A	G	SNP	FSIP2	ENST00000343098	human	ensembl	74_37	+1	known	missense	c.17621	p.K5874R	0.284	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738				33	0	0	30	5	14.2857
FSIP2	0	genome.wustl.edu	37	2	186672784	186672784	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	186672784	186672784	A	G	SNP	FSIP2	ENST00000343098	human	ensembl	74_37	+1	known	missense	c.19018	p.N6340D	0.996	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738				35	0	0	34	10	22.7273
COL5A2	0	genome.wustl.edu	37	2	189907948	189907948	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	189907948	189907948	C	T	SNP	COL5A2	ENST00000374866	human	ensembl	74_37	-1	known	missense	c.3400	p.G1134R	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL5A2	HGNC	ENSG00000204262				40	0	0	24	7	22.5806
ANKAR	0	genome.wustl.edu	37	2	190592776	190592776	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	190592776	190592776	G	A	SNP	ANKAR	ENST00000313581	human	ensembl	74_37	+1	known	missense	c.2830	p.A944T	0.382	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Armadillo,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Armadillo	-	no_errors	ANKAR	HGNC	ENSG00000151687				42	0	0	36	18	33.3333
STAT4	0	genome.wustl.edu	37	2	191898350	191898350	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	191898350	191898350	T	C	SNP	STAT4	ENST00000358470	human	ensembl	74_37	-1	known	missense	c.1718	p.Y573C	0.989	pfam_SH2,pfscan_SH2	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,pfscan_SH2	-	no_errors	STAT4	HGNC	ENSG00000138378				39	0	0	41	23	35.9375
CCDC150	0	genome.wustl.edu	37	2	197594735	197594735	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	197594735	197594735	C	T	SNP	CCDC150	ENST00000389175	human	ensembl	74_37	+1	known	nonsense	c.2875	p.Q959*	1.000	NULL	NULL	-	no_errors	CCDC150	HGNC	ENSG00000144395				32	0	0	14	11	44
BZW1	0	genome.wustl.edu	37	2	201685956	201685956	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	201685956	201685956	G	A	SNP	BZW1	ENST00000409600	human	ensembl	74_37	+1	known	missense	c.1156	p.V386I	1.000	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	-	no_errors	BZW1	HGNC	ENSG00000082153				102	0	0	54	32	37.2093
BMPR2	0	genome.wustl.edu	37	2	203242243	203242243	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	203242243	203242243	T	C	SNP	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	missense	c.46	p.W16R	0.171	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217				74	0	0	53	19	26.3889
SDC1	0	genome.wustl.edu	37	2	20402369	20402369	+	RNA	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	20402369	20402369	A	C	SNP	SDC1	ENST00000482879	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SDC1	HGNC	ENSG00000115884				26	0	0	16	5	23.8095
ZDBF2	0	genome.wustl.edu	37	2	207174279	207174279	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	207174279	207174279	C	T	SNP	ZDBF2	ENST00000374423	human	ensembl	74_37	+1	known	missense	c.5027	p.T1676M	0.002	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186				84	0	0	50	22	30.5556
HS1BP3	0	genome.wustl.edu	37	2	20840730	20840730	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	20840730	20840730	T	C	SNP	HS1BP3	ENST00000406618	human	ensembl	74_37	-1	putative	missense	c.409	p.T137A	0.992	smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	HS1BP3	HGNC	ENSG00000118960				130	0	0	81	37	31.3559
GDF7	0	genome.wustl.edu	37	2	20870996	20870996	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	20870996	20870996	G	A	SNP	GDF7	ENST00000272224	human	ensembl	74_37	+1	known	silent	c.1164	p.S388	1.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF7	HGNC	ENSG00000143869				48	0	0	33	7	17.5
FN1	0	genome.wustl.edu	37	2	216240092	216240092	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	216240092	216240092	C	T	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.6002	p.R2001H	0.006	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				46	0	0	37	12	24.4898
FN1	0	genome.wustl.edu	37	2	216288950	216288950	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	216288950	216288950	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	nonsense	c.1135	p.R379*	1.000	pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				133	0	0	106	49	31.6129
ARPC2	0	genome.wustl.edu	37	2	219114643	219114643	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	219114643	219114643	A	G	SNP	ARPC2	ENST00000295685	human	ensembl	74_37	+1	known	missense	c.877	p.T293A	1.000	NULL	pfam_P34-arc	-	no_errors	ARPC2	HGNC	ENSG00000163466				26	0	0	12	6	33.3333
IHH	0	genome.wustl.edu	37	2	219920027	219920027	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	219920027	219920027	C	T	SNP	IHH	ENST00000295731	human	ensembl	74_37	-1	known	missense	c.1138	p.G380S	1.000	pirsf_Hedgehog,pfam_Hint_dom,prints_Hedgehog	pirsf_Hedgehog,pfam_Hedgehog_signaling_dom,pfam_Hint_dom,superfamily_Hedgehog_sig/DD-Pept_Zn-bd_dom,smart_Hint_dom_N,smart_Hint_dom_C,prints_Hedgehog,pfscan_Intein_splice_site	-	no_errors	IHH	HGNC	ENSG00000163501				27	0	0	29	7	19.4444
OBSL1	0	genome.wustl.edu	37	2	220432517	220432517	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	220432517	220432517	C	A	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.1457	p.G486V	0.991	smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006				68	0	0	43	12	21.8182
COL4A4	0	genome.wustl.edu	37	2	227872902	227872902	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	227872902	227872902	C	T	SNP	COL4A4	ENST00000396625	human	ensembl	74_37	-1	known	silent	c.4641	p.A1547	0.001	pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A4	HGNC	ENSG00000081052				48	0	0	45	8	15.0943
DNER	0	genome.wustl.edu	37	2	230377497	230377497	+	Splice_Site	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	230377497	230377497	A	T	SNP	DNER	ENST00000341772	human	ensembl	74_37	-1	known	splice_site	c.1147+2	e6+2	1.000	-	-	-	no_errors	DNER	HGNC	ENSG00000187957				99	0	0	88	24	21.4286
PDE6D	0	genome.wustl.edu	37	2	232597710	232597710	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	232597710	232597710	G	A	SNP	PDE6D	ENST00000287600	human	ensembl	74_37	-1	known	silent	c.405	p.D135	0.997	pfam_GMP_PDE_delta,superfamily_Ig_E-set,pirsf_Rhodop-sen_GMP-Pdiesterase_dsu	pfam_GMP_PDE_delta,superfamily_Ig_E-set,pirsf_Rhodop-sen_GMP-Pdiesterase_dsu	-	no_errors	PDE6D	HGNC	ENSG00000156973				81	0	0	78	30	27.7778
ALPP	0	genome.wustl.edu	37	2	233244553	233244553	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	233244553	233244553	C	T	SNP	ALPP	ENST00000392027	human	ensembl	74_37	+1	known	silent	c.564	p.R188	0.859	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPP	HGNC	ENSG00000163283				91	0	0	58	22	27.5
USP40	0	genome.wustl.edu	37	2	234436178	234436178	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	234436178	234436178	G	T	SNP	USP40	ENST00000450966	human	ensembl	74_37	-1	known	missense	c.1633	p.L545M	0.978	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP40	HGNC	ENSG00000085982				26	0	0	23	8	25.8065
HJURP	0	genome.wustl.edu	37	2	234749733	234749733	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	234749733	234749733	G	A	SNP	HJURP	ENST00000411486	human	ensembl	74_37	-1	known	missense	c.1693	p.P565S	0.001	pfam_HJURP_C	pfam_HJURP,pfam_HJURP_C,pfam_Centromere_Scm3_N	-	no_errors	HJURP	HGNC	ENSG00000123485				75	0	0	54	17	23.9437
COPS8	0	genome.wustl.edu	37	2	238002771	238002771	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	238002771	238002771	G	A	SNP	COPS8	ENST00000354371	human	ensembl	74_37	+1	known	missense	c.370	p.A124T	1.000	NULL	NULL	-	no_errors	COPS8	HGNC	ENSG00000198612				77	0	0	67	13	16.25
ESPNL	0	genome.wustl.edu	37	2	239009114	239009114	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	239009114	239009114	G	T	SNP	ESPNL	ENST00000343063	human	ensembl	74_37	+1	known	missense	c.54	p.L18F	0.392	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ESPNL	HGNC	ENSG00000144488				26	0	0	16	4	20
PER2	0	genome.wustl.edu	37	2	239162206	239162206	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	239162206	239162206	G	A	SNP	PER2	ENST00000254657	human	ensembl	74_37	-1	known	missense	c.2458	p.R820W	0.005	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER2	HGNC	ENSG00000132326				25	0	0	13	2	13.3333
AQP12B	0	genome.wustl.edu	37	2	241622122	241622122	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	241622122	241622122	C	T	SNP	AQP12B	ENST00000407834	human	ensembl	74_37	-1	known	missense	c.133	p.V45M	0.809	superfamily_Aquaporin-like,pirsf_Aquaporin_11/12	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_Aquaporin_12,prints_MIP	-	no_errors	AQP12B	HGNC	ENSG00000185176				91	0	0	42	13	23.6364
MFSD2B	0	genome.wustl.edu	37	2	24244793	24244793	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	24244793	24244793	T	C	SNP	MFSD2B	ENST00000338315	human	ensembl	74_37	+1	known	missense	c.847	p.Y283H	1.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD2B	HGNC	ENSG00000205639				126	0	0	88	30	25.4237
PFN4	0	genome.wustl.edu	37	2	24344166	24344166	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	24344166	24344166	G	A	SNP	PFN4	ENST00000313213	human	ensembl	74_37	-1	known	missense	c.122	p.T41M	0.999	pfam_Profilin_eukaryotes/bac,superfamily_Profilin_eukaryotes/bac,smart_Profilin_eukaryotes/bac	pfam_Profilin_eukaryotes/bac,superfamily_Profilin_eukaryotes/bac,smart_Profilin_eukaryotes/bac,prints_Profilin_eukaryotes/bac	-	no_errors	PFN4	HGNC	ENSG00000176732				45	0	0	62	14	18.4211
DNMT3A	0	genome.wustl.edu	37	2	25469151	25469151	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	25469151	25469151	T	C	SNP	DNMT3A	ENST00000264709	human	ensembl	74_37	-1	known	missense	c.1307	p.Y436C	1.000	NULL	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3A	HGNC	ENSG00000119772				163	0	0	118	40	25.3165
CAD	0	genome.wustl.edu	37	2	27460632	27460632	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	27460632	27460632	C	T	SNP	CAD	ENST00000264705	human	ensembl	74_37	+1	known	missense	c.4610	p.A1537V	1.000	pfam_Amidohydro_1	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				87	0	0	49	20	28.9855
TRIM54	0	genome.wustl.edu	37	2	27528594	27528594	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	27528594	27528594	G	A	SNP	TRIM54	ENST00000296098	human	ensembl	74_37	+1	known	missense	c.878	p.R293H	0.997	superfamily_Chorismate_mutase_type_II	pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_Chorismate_mutase_type_II,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM54	HGNC	ENSG00000138100				23	0	0	12	8	40
ZNF513	0	genome.wustl.edu	37	2	27601859	27601859	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	27601859	27601859	C	T	SNP	ZNF513	ENST00000323703	human	ensembl	74_37	-1	known	missense	c.274	p.G92S	0.991	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF513	HGNC	ENSG00000163795				44	0	0	32	10	23.8095
CLIP4	0	genome.wustl.edu	37	2	29404553	29404553	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	29404553	29404553	G	T	SNP	CLIP4	ENST00000320081	human	ensembl	74_37	+1	known	missense	c.1912	p.G638C	1.000	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain	pfam_CAP-Gly_domain,pfam_Ankyrin_rpt,superfamily_CAP-Gly_domain,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_CAP-Gly_domain	-	no_errors	CLIP4	HGNC	ENSG00000115295				60	0	0	58	18	23.6842
GALNT14	0	genome.wustl.edu	37	2	31215801	31215801	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	31215801	31215801	G	A	SNP	GALNT14	ENST00000349752	human	ensembl	74_37	-1	known	missense	c.202	p.R68C	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT14	HGNC	ENSG00000158089				86	0	0	60	15	20
RNASEH1	0	genome.wustl.edu	37	2	3595577	3595577	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	3595577	3595577	T	C	SNP	RNASEH1	ENST00000315212	human	ensembl	74_37	-1	known	missense	c.718	p.N240D	1.000	pfam_RNaseH_domain,superfamily_RNaseH-like_dom,pirsf_RNase_H1_euk,pfscan_RNaseH_domain	pfam_RNaseH_domain,pfam_RNase_H1_N,superfamily_RNaseH-like_dom,superfamily_Ribosomal_L9/RNase_H1_N,pirsf_RNase_H1_euk,pfscan_RNaseH_domain	-	no_errors	RNASEH1	HGNC	ENSG00000171865				153	0	0	150	48	24.2424
STRN	0	genome.wustl.edu	37	2	37076751	37076751	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	37076751	37076751	G	A	SNP	STRN	ENST00000263918	human	ensembl	74_37	-1	known	missense	c.2191	p.R731C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_Striatin_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	STRN	HGNC	ENSG00000115808				33	0	0	32	11	25.5814
CEBPZ	0	genome.wustl.edu	37	2	37455664	37455664	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	37455664	37455664	C	T	SNP	CEBPZ	ENST00000234170	human	ensembl	74_37	-1	known	silent	c.672	p.T224	0.257	NULL	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	CEBPZ	HGNC	ENSG00000115816				76	0	0	97	31	24.2188
CYP1B1	0	genome.wustl.edu	37	2	38302370	38302370	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	38302370	38302370	C	T	SNP	CYP1B1	ENST00000260630	human	ensembl	74_37	-1	known	silent	c.162	p.P54	0.534	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP1B1	HGNC	ENSG00000138061				15	0	0	18	8	30.7692
PLEKHH2	0	genome.wustl.edu	37	2	43927482	43927482	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	43927482	43927482	A	C	SNP	PLEKHH2	ENST00000282406	human	ensembl	74_37	+1	known	missense	c.1385	p.Q462P	1.000	NULL	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH2	HGNC	ENSG00000152527				122	0	0	102	40	28.169
PLEKHH2	0	genome.wustl.edu	37	2	43969914	43969914	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	43969914	43969914	C	T	SNP	PLEKHH2	ENST00000282406	human	ensembl	74_37	+1	known	missense	c.3256	p.R1086C	1.000	pfam_MyTH4_dom,smart_MyTH4_dom,pfscan_MyTH4_dom	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH2	HGNC	ENSG00000152527				29	0	0	23	12	34.2857
PPM1B	0	genome.wustl.edu	37	2	44428897	44428897	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	44428897	44428897	G	A	SNP	PPM1B	ENST00000282412	human	ensembl	74_37	+1	known	missense	c.559	p.V187M	1.000	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,pfam_PP2C_C,superfamily_PP2C-like_dom,superfamily_PP2C_C,smart_PP2C-like_dom	-	no_errors	PPM1B	HGNC	ENSG00000138032				80	0	0	70	33	32.0388
SIX3	0	genome.wustl.edu	37	2	45169584	45169584	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	45169584	45169584	C	T	SNP	SIX3	ENST00000260653	human	ensembl	74_37	+1	known	missense	c.341	p.S114L	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX3	HGNC	ENSG00000138083				44	0	0	21	8	27.5862
SIX2	0	genome.wustl.edu	37	2	45236175	45236175	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	45236175	45236175	G	A	SNP	SIX2	ENST00000303077	human	ensembl	74_37	-1	known	silent	c.75	p.G25	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX2	HGNC	ENSG00000170577				29	0	0	35	7	16.6667
TTC7A	0	genome.wustl.edu	37	2	47251494	47251494	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	47251494	47251494	G	A	SNP	TTC7A	ENST00000319190	human	ensembl	74_37	+1	known	missense	c.1637	p.R546Q	1.000	pfscan_TPR-contain_dom	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC7A	HGNC	ENSG00000068724				30	0	0	26	8	23.5294
CCDC88A	0	genome.wustl.edu	37	2	55561313	55561313	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	55561313	55561313	G	A	SNP	CCDC88A	ENST00000436346	human	ensembl	74_37	-1	known	missense	c.2644	p.R882C	0.986	NULL	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CCDC88A	HGNC	ENSG00000115355				35	0	0	31	4	11.4286
USP34	0	genome.wustl.edu	37	2	61468760	61468760	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	61468760	61468760	G	A	SNP	USP34	ENST00000398571	human	ensembl	74_37	-1	known	missense	c.6712	p.R2238C	1.000	superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464				26	0	0	18	8	30.7692
XPO1	0	genome.wustl.edu	37	2	61729421	61729421	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	61729421	61729421	A	T	SNP	XPO1	ENST00000401558	human	ensembl	74_37	-1	known	missense	c.326	p.L109H	1.000	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	pfam_CRM1_C_dom,pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO1	HGNC	ENSG00000082898				35	0	0	35	6	14.6341
ADD2	0	genome.wustl.edu	37	2	70910899	70910899	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	70910899	70910899	C	T	SNP	ADD2	ENST00000264436	human	ensembl	74_37	-1	known	missense	c.949	p.V317M	1.000	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD2	HGNC	ENSG00000075340				40	0	0	39	8	17.0213
CLEC4F	0	genome.wustl.edu	37	2	71043874	71043874	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	71043874	71043874	G	A	SNP	CLEC4F	ENST00000272367	human	ensembl	74_37	-1	known	silent	c.639	p.H213	0.000	superfamily_Prefoldin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_Prefoldin,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	CLEC4F	HGNC	ENSG00000152672				42	0	0	33	9	21.4286
DYSF	0	genome.wustl.edu	37	2	71887771	71887771	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	71887771	71887771	G	A	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	missense	c.4969	p.V1657I	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636				60	0	0	36	17	32.0755
DYSF	0	genome.wustl.edu	37	2	71909699	71909699	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	71909699	71909699	C	A	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	nonsense	c.6189	p.Y2063*	1.000	superfamily_MFS_dom_general_subst_transpt	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636				131	1	0.757576	91	38	29.4574
EXOC6B	0	genome.wustl.edu	37	2	72968532	72968532	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	72968532	72968532	G	A	SNP	EXOC6B	ENST00000272427	human	ensembl	74_37	-1	known	silent	c.180	p.H60	0.996	pirsf_Sec15	pfam_Sec15,pirsf_Sec15	-	no_errors	EXOC6B	HGNC	ENSG00000144036				81	0	0	75	26	25.7426
DUSP11	0	genome.wustl.edu	37	2	73994312	73994312	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	73994312	73994312	C	T	SNP	DUSP11	ENST00000272444	human	ensembl	74_37	-1	known	missense	c.658	p.V220M	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	DUSP11	HGNC	ENSG00000144048				55	0	0	64	13	16.8831
ACTG2	0	genome.wustl.edu	37	2	74143722	74143722	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	74143722	74143722	G	A	SNP	ACTG2	ENST00000345517	human	ensembl	74_37	+1	known	missense	c.817	p.A273T	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTG2	HGNC	ENSG00000163017				35	0	0	17	7	29.1667
HK2	0	genome.wustl.edu	37	2	75116583	75116583	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	75116583	75116583	A	G	SNP	HK2	ENST00000290573	human	ensembl	74_37	+1	known	missense	c.2587	p.T863A	1.000	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK2	HGNC	ENSG00000159399				19	0	0	20	7	25.9259
USP39	0	genome.wustl.edu	37	2	85848673	85848673	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	85848673	85848673	C	T	SNP	USP39	ENST00000409470	human	ensembl	74_37	+1	known	missense	c.404	p.A135V	1.000	pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP39	HGNC	ENSG00000168883				60	0	0	50	19	27.5362
ID2	0	genome.wustl.edu	37	2	8822333	8822333	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	8822333	8822333	A	G	SNP	ID2	ENST00000234091	human	ensembl	74_37	+1	known	missense	c.38	p.N13S	0.994	pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ID2	HGNC	ENSG00000115738				98	0	0	65	18	21.6867
KIDINS220	0	genome.wustl.edu	37	2	8891707	8891707	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	8891707	8891707	T	C	SNP	KIDINS220	ENST00000256707	human	ensembl	74_37	-1	known	missense	c.3079	p.N1027D	1.000	NULL	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC	ENSG00000134313				40	0	0	46	15	24.5902
PROM2	0	genome.wustl.edu	37	2	95943229	95943229	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	95943229	95943229	T	C	SNP	PROM2	ENST00000317620	human	ensembl	74_37	+1	known	missense	c.890	p.L297P	0.994	pfam_Prominin	pfam_Prominin	-	no_errors	PROM2	HGNC	ENSG00000155066				47	0	0	31	11	26.1905
FAHD2A	0	genome.wustl.edu	37	2	96076670	96076670	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	96076670	96076670	G	A	SNP	FAHD2A	ENST00000233379	human	ensembl	74_37	+1	known	missense	c.581	p.R194H	1.000	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	-	no_errors	FAHD2A	HGNC	ENSG00000115042				102	0	0	67	26	27.957
ANKRD36C	0	genome.wustl.edu	37	2	96657309	96657309	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	96657309	96657309	A	C	SNP	ANKRD36C	ENST00000456556	human	ensembl	74_37	-1	known	missense	c.148	p.F50V	0.001	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36C	HGNC	ENSG00000174501				23	0	0	14	8	36.3636
KIAA1211L	0	genome.wustl.edu	37	2	99439884	99439884	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	99439884	99439884	G	A	SNP	KIAA1211L	ENST00000397899	human	ensembl	74_37	-1	known	silent	c.852	p.D284	0.000	NULL	NULL	-	no_errors	KIAA1211L	HGNC	ENSG00000196872				10	0	0	17	6	26.087
SDCBP2	0	genome.wustl.edu	37	20	1294128	1294128	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	1294128	1294128	G	A	SNP	SDCBP2	ENST00000339987	human	ensembl	74_37	-1	known	silent	c.240	p.G80	0.021	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SDCBP2	HGNC	ENSG00000125775				13	0	0	12	4	25
PCSK2	0	genome.wustl.edu	37	20	17434430	17434430	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	17434430	17434430	A	G	SNP	PCSK2	ENST00000262545	human	ensembl	74_37	+1	known	missense	c.929	p.D310G	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK2	HGNC	ENSG00000125851				105	1	0.943396	57	22	27.8481
SNX5	0	genome.wustl.edu	37	20	17937628	17937628	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	17937628	17937628	T	C	SNP	SNX5	ENST00000377759	human	ensembl	74_37	-1	known	missense	c.105	p.I35M	1.000	pfam_Phox,superfamily_Phox,pirsf_Snx5_Snx6,pfscan_Phox	pfam_Phox,pfam_Vps5_C,superfamily_Phox,pirsf_Snx5_Snx6,pfscan_Phox	-	no_errors	SNX5	HGNC	ENSG00000089006				59	0	0	37	15	28.8462
NKX2-2	0	genome.wustl.edu	37	20	21492919	21492919	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	21492919	21492919	G	A	SNP	NKX2-2	ENST00000377142	human	ensembl	74_37	-1	known	missense	c.464	p.A155V	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-2	HGNC	ENSG00000125820				43	0	0	34	11	24.4444
NKX2-2	0	genome.wustl.edu	37	20	21492938	21492938	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	21492938	21492938	G	A	SNP	NKX2-2	ENST00000377142	human	ensembl	74_37	-1	known	nonsense	c.445	p.Q149*	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-2	HGNC	ENSG00000125820				39	0	0	30	11	26.8293
NOP56	0	genome.wustl.edu	37	20	2637470	2637470	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	2637470	2637470	C	T	SNP	NOP56	ENST00000329276	human	ensembl	74_37	+1	known	nonsense	c.1210	p.R404*	1.000	pfam_Nop_dom	pfam_Nop_dom,pfam_NOSIC,pfam_NOP5_N,smart_NOSIC	-	no_errors	NOP56	HGNC	ENSG00000101361				64	0	0	52	19	26.7606
TPX2	0	genome.wustl.edu	37	20	30381659	30381659	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	30381659	30381659	C	T	SNP	TPX2	ENST00000340513	human	ensembl	74_37	+1	known	silent	c.1626	p.D542	0.996	pfam_TPX2_central_dom	pfam_TPX2_central_dom,pfam_Aurora-A-bd,pfam_TPX2_dom_C	-	no_errors	TPX2	HGNC	ENSG00000088325				236	0	0	173	46	21.0046
AVP	0	genome.wustl.edu	37	20	3065237	3065237	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	3065237	3065237	G	A	SNP	AVP	ENST00000380293	human	ensembl	74_37	-1	known	silent	c.84	p.G28	0.206	pirsf_Neurhyp_horm,prints_Neurhyp_horm	pfam_Neurhyp_horm,superfamily_Neurhyp_horm,smart_Neurhyp_horm,pirsf_Neurhyp_horm,prints_Neurhyp_horm	-	no_errors	AVP	HGNC	ENSG00000101200				202	0	0	162	44	21.3592
HCK	0	genome.wustl.edu	37	20	30689165	30689165	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	30689165	30689165	G	A	SNP	HCK	ENST00000375852	human	ensembl	74_37	+1	known	missense	c.1424	p.R475Q	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	HCK	HGNC	ENSG00000101336				42	0	0	36	8	18.1818
DNMT3B	0	genome.wustl.edu	37	20	31375119	31375119	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	31375119	31375119	C	T	SNP	DNMT3B	ENST00000328111	human	ensembl	74_37	+1	known	silent	c.516	p.D172	0.336	NULL	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3B	HGNC	ENSG00000088305				131	0	0	131	32	19.6319
ITCH	0	genome.wustl.edu	37	20	33095507	33095507	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	33095507	33095507	C	T	SNP	ITCH	ENST00000262650	human	ensembl	74_37	+1	known	missense	c.2620	p.R874C	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	ITCH	HGNC	ENSG00000078747				40	0	0	31	12	27.907
MYH7B	0	genome.wustl.edu	37	20	33588098	33588098	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	33588098	33588098	G	A	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	missense	c.4910	p.R1637H	1.000	pfam_Myosin_tail,superfamily_t-SNARE	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814				275	1	0.362319	185	76	29.1188
EDEM2	0	genome.wustl.edu	37	20	33703692	33703692	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	33703692	33703692	C	T	SNP	EDEM2	ENST00000374492	human	ensembl	74_37	-1	known	silent	c.1281	p.S427	0.086	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	EDEM2	HGNC	ENSG00000088298				63	0	0	41	15	26.7857
EPB41L1	0	genome.wustl.edu	37	20	34797802	34797802	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	34797802	34797802	G	A	SNP	EPB41L1	ENST00000338074	human	ensembl	74_37	+1	known	silent	c.2061	p.P687	0.813	pirsf_Band_41_protein	pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB_dom,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L1	HGNC	ENSG00000088367				34	0	0	33	7	17.5
AAR2	0	genome.wustl.edu	37	20	34832791	34832791	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	34832791	34832791	C	T	SNP	AAR2	ENST00000320849	human	ensembl	74_37	+1	known	silent	c.930	p.P310	0.000	pfam_AAR2	pfam_AAR2	-	no_errors	AAR2	HGNC	ENSG00000131043				59	0	0	35	19	35.1852
ATRN	0	genome.wustl.edu	37	20	3565317	3565317	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	3565317	3565317	A	G	SNP	ATRN	ENST00000262919	human	ensembl	74_37	+1	known	missense	c.2974	p.T992A	1.000	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Kelch_1,pfam_Plexin_repeat,pfam_CUB_dom,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRN	HGNC	ENSG00000088812				48	0	0	60	16	21.0526
VSTM2L	0	genome.wustl.edu	37	20	36572486	36572486	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	36572486	36572486	A	G	SNP	VSTM2L	ENST00000373461	human	ensembl	74_37	+1	known	missense	c.446	p.D149G	1.000	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM2L	HGNC	ENSG00000132821				29	0	0	14	8	36.3636
SLC32A1	0	genome.wustl.edu	37	20	37353748	37353748	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	37353748	37353748	C	T	SNP	SLC32A1	ENST00000217420	human	ensembl	74_37	+1	known	silent	c.381	p.N127	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC32A1	HGNC	ENSG00000101438				100	0	0	63	20	24.0964
PLCG1	0	genome.wustl.edu	37	20	39792806	39792806	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	39792806	39792806	G	A	SNP	PLCG1	ENST00000244007	human	ensembl	74_37	+1	known	silent	c.1182	p.L394	0.964	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pirsf_PLC-gamma,pfscan_PLipase_C_PInositol-sp_X_dom	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_Pleckstrin_homology,pfam_C2_dom,pfam_SH3_domain,pfam_SH3_2,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2	-	no_errors	PLCG1	HGNC	ENSG00000124181				93	0	0	77	24	23.7624
CHD6	0	genome.wustl.edu	37	20	40050403	40050403	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	40050403	40050403	C	A	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.4872	p.Q1624H	0.486	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177				50	0	0	35	11	23.913
PTPRT	0	genome.wustl.edu	37	20	41408898	41408898	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	41408898	41408898	G	A	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	silent	c.528	p.Y176	1.000	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom,prints_MAM_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				106	0	0	75	24	24.2424
MYBL2	0	genome.wustl.edu	37	20	42328684	42328684	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	42328684	42328684	G	A	SNP	MYBL2	ENST00000217026	human	ensembl	74_37	+1	known	silent	c.951	p.S317	1.000	NULL	pfam_C-myb_C,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL2	HGNC	ENSG00000101057				91	0	0	73	24	24.7423
JPH2	0	genome.wustl.edu	37	20	42789004	42789004	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	42789004	42789004	G	A	SNP	JPH2	ENST00000372980	human	ensembl	74_37	-1	known	silent	c.423	p.Y141	0.996	pfam_MORN,smart_MORN,pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH2	HGNC	ENSG00000149596				22	0	0	12	5	29.4118
OSER1	0	genome.wustl.edu	37	20	42825820	42825820	+	Silent	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	42825820	42825820	G	T	SNP	OSER1	ENST00000255174	human	ensembl	74_37	-1	known	silent	c.751	p.R251	1.000	NULL	pfam_DUF776	-	no_errors	OSER1	HGNC	ENSG00000132823				67	0	0	78	26	25
YWHAB	0	genome.wustl.edu	37	20	43530233	43530233	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	43530233	43530233	G	A	SNP	YWHAB	ENST00000353703	human	ensembl	74_37	+1	known	missense	c.59	p.R20Q	1.000	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	-	no_errors	YWHAB	HGNC	ENSG00000166913				95	0	0	66	19	22.3529
KCNS1	0	genome.wustl.edu	37	20	43727032	43727032	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	43727032	43727032	G	A	SNP	KCNS1	ENST00000306117	human	ensembl	74_37	-1	known	silent	c.381	p.D127	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNS1	HGNC	ENSG00000124134				11	0	0	9	5	35.7143
SNX21	0	genome.wustl.edu	37	20	44469499	44469499	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	44469499	44469499	G	A	SNP	SNX21	ENST00000491381	human	ensembl	74_37	+1	known	silent	c.669	p.L223	0.995	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,pfam_TPR_1,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX21	HGNC	ENSG00000124104				101	0	0	89	35	28.2258
ELMO2	0	genome.wustl.edu	37	20	45003058	45003058	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	45003058	45003058	G	A	SNP	ELMO2	ENST00000439931	human	ensembl	74_37	-1	known	missense	c.1228	p.R410W	1.000	pfam_Engulfment_cell_motility_ELMO	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO2	HGNC	ENSG00000062598				56	0	0	54	15	21.7391
ZMYND8	0	genome.wustl.edu	37	20	45874842	45874842	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	45874842	45874842	C	T	SNP	ZMYND8	ENST00000536340	human	ensembl	74_37	-1	known	missense	c.2215	p.E739K	1.000	NULL	pfam_DUF3544,pfam_Bromodomain,pfam_PWWP_dom,pfam_Znf_PHD-finger,pfam_Znf_MYND,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND8	HGNC	ENSG00000101040				94	0	0	81	36	30.7692
SULF2	0	genome.wustl.edu	37	20	46305272	46305272	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	46305272	46305272	G	A	SNP	SULF2	ENST00000359930	human	ensembl	74_37	-1	known	missense	c.1346	p.A449V	0.996	superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF2	HGNC	ENSG00000196562				10	0	0	12	8	40
SLC9A8	0	genome.wustl.edu	37	20	48500458	48500458	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	48500458	48500458	G	A	SNP	SLC9A8	ENST00000417961	human	ensembl	74_37	+1	known	missense	c.1394	p.G465D	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A8	HGNC	ENSG00000197818				112	0	0	85	26	23.4234
KCNG1	0	genome.wustl.edu	37	20	49621005	49621005	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	49621005	49621005	G	A	SNP	KCNG1	ENST00000371571	human	ensembl	74_37	-1	known	silent	c.1113	p.R371	0.988	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG1	HGNC	ENSG00000026559				32	0	0	12	6	33.3333
KCNG1	0	genome.wustl.edu	37	20	49626389	49626389	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	49626389	49626389	C	T	SNP	KCNG1	ENST00000371571	human	ensembl	74_37	-1	known	missense	c.487	p.G163S	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG1	HGNC	ENSG00000026559				109	0	0	69	12	14.8148
NFATC2	0	genome.wustl.edu	37	20	50051780	50051780	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	50051780	50051780	G	A	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	silent	c.1977	p.Y659	0.955	pfam_IPT,superfamily_Ig_E-set,smart_IPT,prints_NFAT	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096				171	0	0	107	37	25.6944
CASS4	0	genome.wustl.edu	37	20	55033576	55033576	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	55033576	55033576	G	T	SNP	CASS4	ENST00000360314	human	ensembl	74_37	+1	known	missense	c.2134	p.V712L	0.712	pfam_CAS_DUF3513	pfam_Serine_rich,pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	CASS4	HGNC	ENSG00000087589				95	0	0	73	32	30.4762
GPCPD1	0	genome.wustl.edu	37	20	5550861	5550861	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	5550861	5550861	C	T	SNP	GPCPD1	ENST00000379019	human	ensembl	74_37	-1	known	missense	c.1081	p.V361I	1.000	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,pfam_CBM_fam20,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Carb-bd-like_fold,pfscan_CBM_fam20	-	no_errors	GPCPD1	HGNC	ENSG00000125772				61	0	0	50	13	20.6349
GNAS	0	genome.wustl.edu	37	20	57484420	57484420	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	57484420	57484420	C	T	SNP	GNAS	ENST00000354359	human	ensembl	74_37	+1	known	missense	c.604	p.R202C	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460				65	0	0	45	18	28.5714
FERMT1	0	genome.wustl.edu	37	20	6077604	6077604	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	6077604	6077604	G	A	SNP	FERMT1	ENST00000217289	human	ensembl	74_37	-1	known	missense	c.1034	p.A345V	1.000	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain	pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	FERMT1	HGNC	ENSG00000101311				204	0	0	169	67	28.3898
NTSR1	0	genome.wustl.edu	37	20	61391412	61391412	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	61391412	61391412	C	T	SNP	NTSR1	ENST00000370501	human	ensembl	74_37	+1	known	silent	c.1050	p.N350	0.866	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_NT1_rcpt,prints_GPCR_Rhodpsn,prints_NT_rcpt	-	no_errors	NTSR1	HGNC	ENSG00000101188				184	1	0.540541	164	50	23.3645
OGFR	0	genome.wustl.edu	37	20	61443913	61443913	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	61443913	61443913	C	A	SNP	OGFR	ENST00000290291	human	ensembl	74_37	+1	known	missense	c.946	p.P316T	0.000	NULL	pfam_OGF_rcpt,pfam_OGF_rcpt_rpt	-	no_errors	OGFR	HGNC	ENSG00000060491				13	0	0	6	7	53.8462
YTHDF1	0	genome.wustl.edu	37	20	61835025	61835025	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	61835025	61835025	G	A	SNP	YTHDF1	ENST00000370339	human	ensembl	74_37	-1	known	silent	c.267	p.Y89	0.258	NULL	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDF1	HGNC	ENSG00000149658				86	0	0	80	32	28.5714
HELZ2	0	genome.wustl.edu	37	20	62195546	62195546	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	62195546	62195546	G	A	SNP	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	silent	c.4629	p.S1543	0.000	NULL	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589				31	0	0	15	8	34.7826
SLC2A4RG	0	genome.wustl.edu	37	20	62373423	62373423	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	62373423	62373423	C	T	SNP	SLC2A4RG	ENST00000491109	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC2A4RG	HGNC	ENSG00000125520				25	0	0	25	11	30.5556
DNAJC5	0	genome.wustl.edu	37	20	62559718	62559718	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	62559718	62559718	G	A	SNP	DNAJC5	ENST00000360864	human	ensembl	74_37	+1	known	missense	c.20	p.R7H	1.000	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC5	HGNC	ENSG00000101152				72	0	0	51	19	27.1429
ADAMTS1	0	genome.wustl.edu	37	21	28216636	28216636	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	28216636	28216636	G	A	SNP	ADAMTS1	ENST00000284984	human	ensembl	74_37	-1	known	missense	c.638	p.T213I	0.651	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS1,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS1	HGNC	ENSG00000154734				22	0	0	12	5	29.4118
OLIG2	0	genome.wustl.edu	37	21	34399432	34399432	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	34399432	34399432	T	G	SNP	OLIG2	ENST00000333337	human	ensembl	74_37	+1	known	missense	c.262	p.S88A	0.993	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	OLIG2	HGNC	ENSG00000205927				25	0	0	11	8	42.1053
DOPEY2	0	genome.wustl.edu	37	21	37653908	37653908	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	37653908	37653908	A	G	SNP	DOPEY2	ENST00000399151	human	ensembl	74_37	+1	known	silent	c.6159	p.Q2053	1.000	NULL	pfam_Dopey_N	-	no_errors	DOPEY2	HGNC	ENSG00000142197				26	0	0	8	4	33.3333
SIM2	0	genome.wustl.edu	37	21	38098537	38098537	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	38098537	38098537	G	A	SNP	SIM2	ENST00000290399	human	ensembl	74_37	+1	known	missense	c.661	p.A221T	1.000	smart_PAS	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	SIM2	HGNC	ENSG00000159263				95	0	0	41	23	35.9375
TMPRSS3	0	genome.wustl.edu	37	21	43803162	43803162	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	43803162	43803162	A	G	SNP	TMPRSS3	ENST00000380399	human	ensembl	74_37	-1	known	silent	c.1014	p.T338	0.000	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,pfam_SRCR,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_LDrepeatLR_classA_rpt,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS3	HGNC	ENSG00000160183				58	0	0	42	10	19.2308
UBASH3A	0	genome.wustl.edu	37	21	43857603	43857603	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	43857603	43857603	G	A	SNP	UBASH3A	ENST00000319294	human	ensembl	74_37	+1	known	missense	c.1399	p.A467T	0.849	pfam_His_Pase_superF_clade-1	pfam_His_Pase_superF_clade-1,pfam_SH3_domain,superfamily_SH3_domain,superfamily_UBA-like,smart_SH3_domain,pfscan_SH3_domain,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBASH3A	HGNC	ENSG00000160185				50	0	0	29	12	29.2683
TRPM2	0	genome.wustl.edu	37	21	45810896	45810896	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	45810896	45810896	G	C	SNP	TRPM2	ENST00000300482	human	ensembl	74_37	+1	known	missense	c.1428	p.E476D	1.000	NULL	pfam_Ion_trans_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	TRPM2	HGNC	ENSG00000142185				122	0	0	64	29	31.1828
KRTAP10-11	0	genome.wustl.edu	37	21	46066846	46066846	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	46066846	46066846	T	C	SNP	KRTAP10-11	ENST00000334670	human	ensembl	74_37	+1	known	silent	c.471	p.C157	0.000	NULL	NULL	-	no_errors	KRTAP10-11	HGNC	ENSG00000243489				327	0	0	141	72	33.8028
SLC19A1	0	genome.wustl.edu	37	21	46951771	46951771	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	46951771	46951771	G	A	SNP	SLC19A1	ENST00000311124	human	ensembl	74_37	-1	known	silent	c.481	p.L161	1.000	pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	-	no_errors	SLC19A1	HGNC	ENSG00000173638				15	0	0	6	3	33.3333
FTCD	0	genome.wustl.edu	37	21	47571484	47571484	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	47571484	47571484	G	A	SNP	FTCD	ENST00000359679	human	ensembl	74_37	-1	known	silent	c.624	p.R208	0.592	pfam_Formiminotransferase_C,superfamily_FormiminoTrfase_N/C_subdom,tigrfam_Formiminotransferase_cat	pfam_Formiminotransferase_N,pfam_Formiminotransferase_C,pfam_Cyclodeamin/CycHdrlase,superfamily_FormiminoTrfase_N/C_subdom,superfamily_Cyclodeamin/CycHdrlase,tigrfam_Formiminotransferase_cat	-	no_errors	FTCD	HGNC	ENSG00000160282				86	0	0	40	24	37.5
LSS	0	genome.wustl.edu	37	21	47635602	47635602	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	47635602	47635602	A	G	SNP	LSS	ENST00000356396	human	ensembl	74_37	-1	known	missense	c.889	p.Y297H	0.991	superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	-	no_errors	LSS	HGNC	ENSG00000160285				29	0	0	11	5	31.25
PCNT	0	genome.wustl.edu	37	21	47831877	47831877	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	47831877	47831877	G	A	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	missense	c.5890	p.A1964T	0.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299				31	0	0	17	8	32
LZTR1	0	genome.wustl.edu	37	22	21345966	21345966	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	21345966	21345966	C	A	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	missense	c.841	p.P281T	1.000	smart_Kelch_1	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	LZTR1	HGNC	ENSG00000099949				18	0	0	8	4	33.3333
THAP7-AS1	0	genome.wustl.edu	37	22	21363780	21363780	+	RNA	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	21363780	21363780	G	C	SNP	THAP7-AS1	ENST00000436079	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	THAP7-AS1	HGNC	ENSG00000230513				32	0	0	25	8	24.2424
SLC7A4	0	genome.wustl.edu	37	22	21385709	21385709	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	21385709	21385709	G	A	SNP	SLC7A4	ENST00000382932	human	ensembl	74_37	-1	known	silent	c.393	p.A131	0.037	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A4	HGNC	ENSG00000099960				47	0	0	31	5	13.8889
VPREB1	0	genome.wustl.edu	37	22	22599374	22599374	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	22599374	22599374	G	A	SNP	VPREB1	ENST00000403807	human	ensembl	74_37	+1	known	silent	c.63	p.P21	0.000	pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	VPREB1	HGNC	ENSG00000169575				100	0	0	65	27	29.3478
PRAME	0	genome.wustl.edu	37	22	22892314	22892314	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	22892314	22892314	G	A	SNP	PRAME	ENST00000398741	human	ensembl	74_37	-1	known	missense	c.787	p.R263C	0.030	NULL	NULL	-	no_errors	PRAME	HGNC	ENSG00000185686				89	0	0	69	15	17.8571
PIWIL3	0	genome.wustl.edu	37	22	25155867	25155867	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	25155867	25155867	T	G	SNP	PIWIL3	ENST00000332271	human	ensembl	74_37	-1	known	missense	c.192	p.R64S	0.001	NULL	pfam_Piwi,pfam_PAZ_dom,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL3	HGNC	ENSG00000184571				483	0	0	409	125	23.4082
SGSM1	0	genome.wustl.edu	37	22	25294157	25294157	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	25294157	25294157	G	A	SNP	SGSM1	ENST00000400359	human	ensembl	74_37	+1	known	silent	c.2406	p.T802	0.000	superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM1	HGNC	ENSG00000167037				94	0	0	60	27	31.0345
CRYBB3	0	genome.wustl.edu	37	22	25597378	25597378	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	25597378	25597378	C	T	SNP	CRYBB3	ENST00000215855	human	ensembl	74_37	+1	known	silent	c.15	p.H5	0.233	NULL	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBB3	HGNC	ENSG00000100053				138	0	0	97	29	23.0159
ZNRF3	0	genome.wustl.edu	37	22	29446260	29446260	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	29446260	29446260	C	T	SNP	ZNRF3	ENST00000544604	human	ensembl	74_37	+1	known	silent	c.2091	p.L697	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF3	HGNC	ENSG00000183579				44	0	0	34	6	15
KREMEN1	0	genome.wustl.edu	37	22	29533623	29533623	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	29533623	29533623	C	T	SNP	KREMEN1	ENST00000327813	human	ensembl	74_37	+1	known	missense	c.925	p.R309C	1.000	pirsf_Kremen,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_Kremen,pfam_Kringle,pfam_WSC_carb-bd,pfam_CUB_dom,superfamily_Kringle-like,superfamily_CUB_dom,superfamily_Scorpion_toxin-like,smart_Kringle,smart_WSC_carb-bd_subgr,smart_CUB_dom,pfscan_CUB_dom,pfscan_Kringle,pfscan_WSC_carb-bd	-	no_errors	KREMEN1	HGNC	ENSG00000183762				32	0	0	35	10	22.2222
EWSR1	0	genome.wustl.edu	37	22	29693934	29693934	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	29693934	29693934	G	A	SNP	EWSR1	ENST00000414183	human	ensembl	74_37	+1	known	missense	c.1427	p.R476H	0.998	NULL	pfam_Znf_RanBP2,pfam_RRM_dom,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	EWSR1	HGNC	ENSG00000182944				73	0	0	55	16	22.5352
AP1B1	0	genome.wustl.edu	37	22	29752428	29752428	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	29752428	29752428	G	A	SNP	AP1B1	ENST00000357586	human	ensembl	74_37	-1	known	missense	c.703	p.R235C	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,pfam_HEAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Armadillo,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP1B1	HGNC	ENSG00000100280				26	0	0	25	12	32.4324
ASCC2	0	genome.wustl.edu	37	22	30185160	30185160	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	30185160	30185160	T	C	SNP	ASCC2	ENST00000307790	human	ensembl	74_37	-1	known	missense	c.2116	p.S706G	1.000	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	ASCC2	HGNC	ENSG00000100325				280	0	0	226	68	23.1293
ASCC2	0	genome.wustl.edu	37	22	30221201	30221201	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	30221201	30221201	G	A	SNP	ASCC2	ENST00000307790	human	ensembl	74_37	-1	known	missense	c.286	p.R96C	0.925	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	ASCC2	HGNC	ENSG00000100325				122	0	0	82	25	23.3645
TCN2	0	genome.wustl.edu	37	22	31011717	31011717	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	31011717	31011717	G	A	SNP	TCN2	ENST00000215838	human	ensembl	74_37	+1	known	missense	c.883	p.V295I	0.042	pfam_Cbl-bd_transpt_euk	pfam_Cbl-bd_transpt_euk,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	TCN2	HGNC	ENSG00000185339				116	0	0	121	29	19.3333
LIMK2	0	genome.wustl.edu	37	22	31663021	31663021	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	31663021	31663021	T	C	SNP	LIMK2	ENST00000331728	human	ensembl	74_37	+1	known	missense	c.1093	p.C365R	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Znf_LIM,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK2	HGNC	ENSG00000182541				23	0	0	6	4	40
PRR14L	0	genome.wustl.edu	37	22	32108375	32108375	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	32108375	32108375	A	G	SNP	PRR14L	ENST00000397493	human	ensembl	74_37	-1	known	missense	c.5450	p.V1817A	0.999	NULL	NULL	-	no_errors	PRR14L	HGNC	ENSG00000183530				27	0	0	7	10	58.8235
LARGE	0	genome.wustl.edu	37	22	33700401	33700401	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	33700401	33700401	C	T	SNP	LARGE	ENST00000354992	human	ensembl	74_37	-1	known	missense	c.1544	p.R515H	1.000	NULL	pfam_Glyco_trans_8	-	no_errors	LARGE	HGNC	ENSG00000133424				64	0	0	45	15	25
APOL2	0	genome.wustl.edu	37	22	36624004	36624004	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	36624004	36624004	C	T	SNP	APOL2	ENST00000249066	human	ensembl	74_37	-1	known	missense	c.460	p.G154S	0.001	pfam_ApoL	pfam_ApoL	-	no_errors	APOL2	HGNC	ENSG00000128335				77	0	0	57	11	16.1765
MYH9	0	genome.wustl.edu	37	22	36678790	36678790	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	36678790	36678790	C	T	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	missense	c.5807	p.R1936Q	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345				74	0	0	45	15	25
TMPRSS6	0	genome.wustl.edu	37	22	37499331	37499331	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	37499331	37499331	G	A	SNP	TMPRSS6	ENST00000381792	human	ensembl	74_37	-1	known	missense	c.127	p.R43C	0.999	pirsf_Pept_S1A_matriptase-2	pirsf_Pept_S1A_matriptase-2,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_SEA_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	TMPRSS6	HGNC	ENSG00000187045				123	0	0	76	21	21.6495
TRIOBP	0	genome.wustl.edu	37	22	38120083	38120083	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	38120083	38120083	G	A	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	missense	c.1520	p.R507Q	0.029	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106				175	0	0	172	12	6.52174
GALR3	0	genome.wustl.edu	37	22	38221250	38221250	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	38221250	38221250	G	A	SNP	GALR3	ENST00000249041	human	ensembl	74_37	+1	known	missense	c.880	p.A294T	1.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Galanin_rcpt,prints_GPCR_Rhodpsn,prints_Galnin_3_rcpt	-	no_errors	GALR3	HGNC	ENSG00000128310				32	0	0	21	16	43.2432
POLR2F	0	genome.wustl.edu	37	22	38352793	38352793	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	38352793	38352793	G	A	SNP	POLR2F	ENST00000442738	human	ensembl	74_37	+1	known	missense	c.34	p.D12N	0.999	superfamily_Pol_omega/K/RPB6	pfam_Pol_omega/K/RPB6,superfamily_Pol_omega/K/RPB6	-	no_errors	POLR2F	HGNC	ENSG00000100142				54	0	0	40	18	31.0345
APOBEC3B	0	genome.wustl.edu	37	22	39380103	39380103	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	39380103	39380103	G	A	SNP	APOBEC3B	ENST00000333467	human	ensembl	74_37	+1	known	missense	c.41	p.R14Q	0.000	pfam_APOBEC_N	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC3B	HGNC	ENSG00000179750				65	0	0	14	22	61.1111
MGAT3	0	genome.wustl.edu	37	22	39884756	39884756	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	39884756	39884756	G	A	SNP	MGAT3	ENST00000341184	human	ensembl	74_37	+1	known	silent	c.1404	p.T468	0.011	pfam_Glyco_trans_17	pfam_Glyco_trans_17	-	no_errors	MGAT3	HGNC	ENSG00000128268				25	0	0	22	9	29.0323
FAM83F	0	genome.wustl.edu	37	22	40417954	40417954	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	40417954	40417954	T	C	SNP	FAM83F	ENST00000333407	human	ensembl	74_37	+1	known	silent	c.1440	p.S480	0.000	NULL	pfam_DUF1669	-	no_errors	FAM83F	HGNC	ENSG00000133477				57	0	0	40	9	18.3673
MKL1	0	genome.wustl.edu	37	22	40814976	40814976	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	40814976	40814976	A	G	SNP	MKL1	ENST00000355630	human	ensembl	74_37	-1	known	missense	c.1466	p.L489P	0.986	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL1	HGNC	ENSG00000196588				48	0	0	32	7	17.9487
ENSG00000235513	0	genome.wustl.edu	37	22	41605640	41605640	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	41605640	41605640	C	T	SNP	ENSG00000235513	ENST00000441316	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP4-756G23.5	Clone_based_vega_gene	ENSG00000235513				92	0	0	78	20	20.4082
SULT4A1	0	genome.wustl.edu	37	22	44237735	44237735	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	44237735	44237735	C	T	SNP	SULT4A1	ENST00000330884	human	ensembl	74_37	-1	known	missense	c.247	p.D83N	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT4A1	HGNC	ENSG00000130540				78	0	0	55	21	27.6316
ARHGAP8	0	genome.wustl.edu	37	22	45221431	45221431	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	45221431	45221431	G	A	SNP	ARHGAP8	ENST00000517296	human	ensembl	74_37	+1	known	missense	c.1184	p.R395Q	0.996	NULL	pfam_RhoGAP_dom,pfam_HbrB,pfam_CRAL-TRIO_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CRAL-TRIO_dom,smart_RhoGAP_dom,pfscan_CRAL-TRIO_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP8	HGNC	ENSG00000241484				46	0	0	31	15	32.6087
NUP50	0	genome.wustl.edu	37	22	45571860	45571860	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	45571860	45571860	C	T	SNP	NUP50	ENST00000347635	human	ensembl	74_37	+1	known	missense	c.239	p.A80V	0.612	pfam_NUP2/50/61	pfam_NUP2/50/61,pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	-	no_errors	NUP50	HGNC	ENSG00000093000				86	0	0	69	21	23.3333
TUBGCP6	0	genome.wustl.edu	37	22	50657780	50657780	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	50657780	50657780	A	G	SNP	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	missense	c.4421	p.L1474P	1.000	pfam_TUBGCP	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159				23	0	0	6	6	50
SBF1	0	genome.wustl.edu	37	22	50900134	50900134	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	50900134	50900134	C	T	SNP	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	missense	c.2657	p.R886Q	1.000	pfam_GRAM,smart_GRAM	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241				46	0	0	29	10	25.641
LMF2	0	genome.wustl.edu	37	22	50942064	50942064	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	50942064	50942064	C	T	SNP	LMF2	ENST00000474879	human	ensembl	74_37	-1	known	missense	c.1880	p.R627H	0.065	NULL	pfam_LMF	-	no_errors	LMF2	HGNC	ENSG00000100258				18	0	0	7	5	41.6667
TYMP	0	genome.wustl.edu	37	22	50967735	50967735	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	50967735	50967735	T	C	SNP	TYMP	ENST00000252029	human	ensembl	74_37	-1	known	missense	c.247	p.M83V	1.000	pfam_Glycosyl_Trfase_fam3_N_dom,superfamily_Glycosyl_Trfase_fam3_N_dom,pirsf_Pyrmidine_PPase,tigrfam_Pyrmidine_PPas_bac/euk	pfam_Glycosyl_Trfase_fam3,pfam_Glycosyl_Trfase_fam3_N_dom,pfam_PYNP_C,superfamily_Glycosyl_Trfase_fam3,superfamily_PYNP_C,superfamily_Glycosyl_Trfase_fam3_N_dom,smart_PYNP_C,pirsf_Pyrmidine_PPase,tigrfam_Pyrmidine_PPas_bac/euk	-	no_errors	TYMP	HGNC	ENSG00000025708				42	0	0	53	14	20.8955
TYMP	0	genome.wustl.edu	37	22	50967741	50967741	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	50967741	50967741	G	A	SNP	TYMP	ENST00000252029	human	ensembl	74_37	-1	known	missense	c.241	p.R81W	0.317	pfam_Glycosyl_Trfase_fam3_N_dom,superfamily_Glycosyl_Trfase_fam3_N_dom,pirsf_Pyrmidine_PPase,tigrfam_Pyrmidine_PPas_bac/euk	pfam_Glycosyl_Trfase_fam3,pfam_Glycosyl_Trfase_fam3_N_dom,pfam_PYNP_C,superfamily_Glycosyl_Trfase_fam3,superfamily_PYNP_C,superfamily_Glycosyl_Trfase_fam3_N_dom,smart_PYNP_C,pirsf_Pyrmidine_PPase,tigrfam_Pyrmidine_PPas_bac/euk	-	no_errors	TYMP	HGNC	ENSG00000025708				43	0	0	51	14	21.5385
CPT1B	0	genome.wustl.edu	37	22	51012061	51012061	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	51012061	51012061	C	T	SNP	CPT1B	ENST00000312108	human	ensembl	74_37	-1	known	missense	c.1054	p.A352T	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560				54	0	0	40	16	28.5714
IMPG2	0	genome.wustl.edu	37	3	100962449	100962449	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	100962449	100962449	T	C	SNP	IMPG2	ENST00000193391	human	ensembl	74_37	-1	known	missense	c.2726	p.N909S	1.000	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG2	HGNC	ENSG00000081148				36	0	0	17	9	34.6154
FANCD2	0	genome.wustl.edu	37	3	10138154	10138154	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	10138154	10138154	C	T	SNP	FANCD2	ENST00000287647	human	ensembl	74_37	+1	known	nonsense	c.4183	p.Q1395*	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FANCD2	HGNC	ENSG00000144554				64	0	0	65	16	19.7531
DPPA2	0	genome.wustl.edu	37	3	109028155	109028155	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	109028155	109028155	C	T	SNP	DPPA2	ENST00000478945	human	ensembl	74_37	-1	known	silent	c.204	p.E68	0.000	NULL	pfscan_SAP_dom	-	no_errors	DPPA2	HGNC	ENSG00000163530				93	0	0	79	24	23.301
ENSG00000228980	0	genome.wustl.edu	37	3	109128860	109128860	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	109128860	109128860	C	T	SNP	ENSG00000228980	ENST00000497996	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-702L6.4	Clone_based_vega_gene	ENSG00000228980				32	0	0	20	6	23.0769
CD200R1	0	genome.wustl.edu	37	3	112666723	112666723	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	112666723	112666723	C	A	SNP	CD200R1	ENST00000308611	human	ensembl	74_37	-1	known	missense	c.116	p.S39I	0.000	NULL	pfam_CD80_C2-set,pfscan_Ig-like_dom	-	no_errors	CD200R1	HGNC	ENSG00000163606				27	0	0	35	5	12.5
ZBTB20	0	genome.wustl.edu	37	3	114070632	114070632	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	114070632	114070632	C	T	SNP	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	missense	c.293	p.R98H	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				55	0	0	48	14	22.5806
TAMM41	0	genome.wustl.edu	37	3	11851061	11851061	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	11851061	11851061	T	C	SNP	TAMM41	ENST00000273037	human	ensembl	74_37	-1	known	silent	c.804	p.K268	0.998	pfam_Mmp37,pirsf_Mmp37	pfam_Mmp37,pirsf_Mmp37	-	no_errors	TAMM41	HGNC	ENSG00000144559				70	0	0	48	17	26.1538
TMEM39A	0	genome.wustl.edu	37	3	119153647	119153647	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	119153647	119153647	C	T	SNP	TMEM39A	ENST00000319172	human	ensembl	74_37	-1	known	missense	c.1195	p.V399M	1.000	pfam_Uncharacterised_TMEM39	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39A	HGNC	ENSG00000176142				90	0	0	85	22	20.5607
GPR156	0	genome.wustl.edu	37	3	119899986	119899986	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	119899986	119899986	T	C	SNP	GPR156	ENST00000315843	human	ensembl	74_37	-1	known	missense	c.919	p.I307V	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3_GABA_rcpt_B	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GPR156	HGNC	ENSG00000175697				91	0	0	69	26	27.3684
ADCY5	0	genome.wustl.edu	37	3	123046536	123046536	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	123046536	123046536	C	T	SNP	ADCY5	ENST00000462833	human	ensembl	74_37	-1	known	missense	c.1876	p.G626S	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY5	HGNC	ENSG00000173175				40	0	0	30	8	21.0526
UROC1	0	genome.wustl.edu	37	3	126224606	126224606	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	126224606	126224606	C	T	SNP	UROC1	ENST00000290868	human	ensembl	74_37	-1	known	missense	c.751	p.G251R	0.998	pfam_Urocanase,superfamily_Urocanase,pirsf_Urocanase	pfam_Urocanase,superfamily_Urocanase,pirsf_Urocanase	-	no_errors	UROC1	HGNC	ENSG00000159650				76	0	0	59	18	23.3766
PLXNA1	0	genome.wustl.edu	37	3	126733160	126733160	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	126733160	126733160	C	T	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	missense	c.2546	p.A849V	0.003	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				26	0	0	10	4	28.5714
PLXNA1	0	genome.wustl.edu	37	3	126749123	126749123	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	126749123	126749123	C	A	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	missense	c.5099	p.T1700N	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				134	0	0	91	21	18.75
COPG1	0	genome.wustl.edu	37	3	128987780	128987780	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	128987780	128987780	A	G	SNP	COPG1	ENST00000314797	human	ensembl	74_37	+1	known	missense	c.1780	p.T594A	0.266	pirsf_Coatomer_gsu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Coatomer_gsu_app_Ig-like-sub,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,superfamily_Coatomer/calthrin_app_sub_C,pirsf_Coatomer_gsu	-	no_errors	COPG1	HGNC	ENSG00000181789				181	0	0	114	38	25
PLXND1	0	genome.wustl.edu	37	3	129275467	129275467	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	129275467	129275467	C	T	SNP	PLXND1	ENST00000324093	human	ensembl	74_37	-1	known	missense	c.5654	p.R1885Q	0.987	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXND1	HGNC	ENSG00000004399				21	0	0	10	6	37.5
NPHP3	0	genome.wustl.edu	37	3	132419201	132419201	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	132419201	132419201	T	C	SNP	NPHP3	ENST00000337331	human	ensembl	74_37	-1	known	missense	c.1720	p.I574V	1.000	superfamily_P-loop_NTPase	pfam_TPR_1,pfam_TPR-3,superfamily_P-loop_NTPase,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NPHP3	HGNC	ENSG00000113971				38	0	0	29	16	35.5556
C3orf36	0	genome.wustl.edu	37	3	133647420	133647420	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	133647420	133647420	C	T	SNP	C3orf36	ENST00000408895	human	ensembl	74_37	-1	known	silent	c.228	p.A76	0.000	NULL	NULL	-	no_errors	C3orf36	HGNC	ENSG00000221972				25	0	0	18	8	30.7692
NUP210	0	genome.wustl.edu	37	3	13393426	13393426	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	13393426	13393426	C	T	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	missense	c.2788	p.A930T	0.000	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182				90	0	0	62	21	25.3012
NME9	0	genome.wustl.edu	37	3	138023786	138023786	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	138023786	138023786	G	A	SNP	NME9	ENST00000333911	human	ensembl	74_37	-1	known	silent	c.720	p.D240	0.557	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase	pfam_Nucleoside_diP_kinase,pfam_Thioredoxin_domain,superfamily_Nucleoside_diP_kinase,superfamily_Thioredoxin-like_fold,smart_Nucleoside_diP_kinase,prints_Nucleoside_diP_kinase	-	no_errors	NME9	HGNC	ENSG00000181322				182	0	0	162	49	23.2227
FGD5P1	0	genome.wustl.edu	37	3	13977935	13977935	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	13977935	13977935	C	T	SNP	FGD5P1	ENST00000502451	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.952	-	-	-	no_errors	FGD5P1	HGNC	ENSG00000250439				34	0	0	30	11	26.8293
ZBTB38	0	genome.wustl.edu	37	3	141164238	141164238	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	141164238	141164238	G	A	SNP	ZBTB38	ENST00000321464	human	ensembl	74_37	+1	known	missense	c.3011	p.R1004Q	0.998	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB38	HGNC	ENSG00000177311				35	0	0	41	13	24.0741
SLC9A9	0	genome.wustl.edu	37	3	143185877	143185877	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	143185877	143185877	A	G	SNP	SLC9A9	ENST00000316549	human	ensembl	74_37	-1	known	splice_site	c.1469+2	e12+2	0.999	-	-	-	no_errors	SLC9A9	HGNC	ENSG00000181804				37	0	0	23	10	30.303
ZIC1	0	genome.wustl.edu	37	3	147130455	147130455	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	147130455	147130455	G	A	SNP	ZIC1	ENST00000282928	human	ensembl	74_37	+1	known	missense	c.1133	p.R378H	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC1	HGNC	ENSG00000152977				90	0	0	79	35	30.7018
MED12L	0	genome.wustl.edu	37	3	151105704	151105704	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	151105704	151105704	A	G	SNP	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	missense	c.5090	p.D1697G	1.000	NULL	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893				80	0	0	77	30	28.0374
EAF1	0	genome.wustl.edu	37	3	15475880	15475880	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	15475880	15475880	G	A	SNP	EAF1	ENST00000396842	human	ensembl	74_37	+1	known	missense	c.361	p.A121T	1.000	NULL	pfam_Tscrpt_elong_fac_Eaf_N	-	no_errors	EAF1	HGNC	ENSG00000144597				294	0	0	280	70	20
COLQ	0	genome.wustl.edu	37	3	15497436	15497436	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	15497436	15497436	C	T	SNP	COLQ	ENST00000383788	human	ensembl	74_37	-1	known	missense	c.1165	p.G389S	0.886	tigrfam_Myxo_disulph_rpt	pfam_Collagen,tigrfam_Myxo_disulph_rpt	-	no_errors	COLQ	HGNC	ENSG00000206561				55	0	0	47	17	26.5625
MECOM	0	genome.wustl.edu	37	3	168840366	168840366	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	168840366	168840366	A	G	SNP	MECOM	ENST00000494292	human	ensembl	74_37	-1	known	splice_site	c.978+2	e6+2	1.000	-	-	-	no_errors	MECOM	HGNC	ENSG00000085276				48	0	0	44	6	12
ACTRT3	0	genome.wustl.edu	37	3	169485249	169485249	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	169485249	169485249	G	T	SNP	ACTRT3	ENST00000330368	human	ensembl	74_37	-1	known	missense	c.1090	p.P364T	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT3	HGNC	ENSG00000184378				58	0	0	56	5	8.19672
PLCL2	0	genome.wustl.edu	37	3	17053062	17053062	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	17053062	17053062	G	A	SNP	PLCL2	ENST00000418129	human	ensembl	74_37	+1	known	missense	c.1846	p.A616T	1.000	superfamily_PLC-like_Pdiesterase_TIM-brl,pfscan_C2_dom	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL2	HGNC	ENSG00000154822				59	0	0	59	15	20.2703
NAALADL2	0	genome.wustl.edu	37	3	175473035	175473035	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	175473035	175473035	T	C	SNP	NAALADL2	ENST00000454872	human	ensembl	74_37	+1	known	missense	c.2018	p.L673S	0.997	superfamily_TFR-like_dimer_dom	superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL2	HGNC	ENSG00000177694				37	0	0	43	14	24.5614
TBL1XR1	0	genome.wustl.edu	37	3	176768322	176768322	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	176768322	176768322	A	G	SNP	TBL1XR1	ENST00000430069	human	ensembl	74_37	-1	known	silent	c.504	p.H168	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL1XR1	HGNC	ENSG00000177565				27	0	0	31	6	16.2162
SENP2	0	genome.wustl.edu	37	3	185318608	185318608	+	Silent	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	185318608	185318608	C	A	SNP	SENP2	ENST00000296257	human	ensembl	74_37	+1	known	silent	c.414	p.T138	0.778	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP2	HGNC	ENSG00000163904				200	0	0	171	48	21.9178
LPP	0	genome.wustl.edu	37	3	188477984	188477984	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	188477984	188477984	T	C	SNP	LPP	ENST00000312675	human	ensembl	74_37	+1	known	missense	c.1324	p.F442L	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LPP	HGNC	ENSG00000145012				71	0	0	45	20	30.7692
TPRG1	0	genome.wustl.edu	37	3	188925381	188925381	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	188925381	188925381	C	T	SNP	TPRG1	ENST00000345063	human	ensembl	74_37	+1	known	missense	c.208	p.R70W	1.000	pfam_Inositol_phosphatase	pfam_Inositol_phosphatase	-	no_errors	TPRG1	HGNC	ENSG00000188001				85	0	0	53	20	27.3973
LEPREL1	0	genome.wustl.edu	37	3	189675769	189675769	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	189675769	189675769	T	C	SNP	LEPREL1	ENST00000319332	human	ensembl	74_37	-1	known	missense	c.2059	p.I687V	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	LEPREL1	HGNC	ENSG00000090530				50	0	0	48	13	21.3115
CPN2	0	genome.wustl.edu	37	3	194062683	194062683	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	194062683	194062683	C	T	SNP	CPN2	ENST00000323830	human	ensembl	74_37	-1	known	missense	c.749	p.R250H	0.001	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	CPN2	HGNC	ENSG00000178772				69	0	0	47	17	26.5625
TNK2	0	genome.wustl.edu	37	3	195594872	195594872	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	195594872	195594872	C	T	SNP	TNK2	ENST00000381916	human	ensembl	74_37	-1	known	missense	c.2486	p.R829H	0.993	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cdc42_binding_dom_like,pfam_Inhibitor_Mig-6,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	TNK2	HGNC	ENSG00000061938				19	0	0	9	5	35.7143
PCYT1A	0	genome.wustl.edu	37	3	195975168	195975168	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	195975168	195975168	C	T	SNP	PCYT1A	ENST00000292823	human	ensembl	74_37	-1	known	missense	c.244	p.D82N	1.000	pfam_Cyt_trans-like,tigrfam_Cyt_trans-like	pfam_Cyt_trans-like,superfamily_NA-bd_OB-fold,tigrfam_Cyt_trans-like	-	no_errors	PCYT1A	HGNC	ENSG00000161217				74	0	0	46	18	28.125
PCYT1A	0	genome.wustl.edu	37	3	195984673	195984673	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	195984673	195984673	C	T	SNP	PCYT1A	ENST00000292823	human	ensembl	74_37	-1	known	missense	c.203	p.S68N	0.923	NULL	pfam_Cyt_trans-like,superfamily_NA-bd_OB-fold,tigrfam_Cyt_trans-like	-	no_errors	PCYT1A	HGNC	ENSG00000161217				33	0	0	33	8	19.5122
NRROS	0	genome.wustl.edu	37	3	196388469	196388469	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	196388469	196388469	A	G	SNP	NRROS	ENST00000328557	human	ensembl	74_37	+1	known	missense	c.1955	p.Y652C	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	NRROS	HGNC	ENSG00000174004				139	0	0	118	38	24.359
RPL15	0	genome.wustl.edu	37	3	23959968	23959968	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	23959968	23959968	C	T	SNP	RPL15	ENST00000307839	human	ensembl	74_37	+1	known	silent	c.210	p.G70	0.999	pfam_Ribosomal_L15e,superfamily_Ribosomal_L23/L15e_core_dom	pfam_Ribosomal_L15e,superfamily_Ribosomal_L23/L15e_core_dom	-	no_errors	RPL15	HGNC	ENSG00000174748				47	0	0	48	16	25
CMTM7	0	genome.wustl.edu	37	3	32483485	32483485	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	32483485	32483485	T	C	SNP	CMTM7	ENST00000334983	human	ensembl	74_37	+1	known	missense	c.313	p.C105R	1.000	pfam_Marvel	pfam_Marvel	-	no_errors	CMTM7	HGNC	ENSG00000153551				100	0	0	74	27	26.7327
SCN5A	0	genome.wustl.edu	37	3	38592960	38592960	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	38592960	38592960	T	C	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.4903	p.R1635G	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				155	0	0	110	39	26.1745
ULK4	0	genome.wustl.edu	37	3	41979677	41979677	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	41979677	41979677	G	A	SNP	ULK4	ENST00000301831	human	ensembl	74_37	-1	known	missense	c.151	p.R51C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ULK4	HGNC	ENSG00000168038				23	0	0	13	8	38.0952
SNRK	0	genome.wustl.edu	37	3	43345219	43345219	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	43345219	43345219	G	A	SNP	SNRK	ENST00000296088	human	ensembl	74_37	+1	known	missense	c.524	p.C175Y	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	SNRK	HGNC	ENSG00000163788				109	0	0	93	24	20.5128
SETMAR	0	genome.wustl.edu	37	3	4345101	4345101	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	4345101	4345101	A	G	SNP	SETMAR	ENST00000358065	human	ensembl	74_37	+1	known	missense	c.47	p.E16G	0.000	NULL	pfam_Transposase_1,pfam_SET_dom,pfam_Pre-SET_dom,pfam_Transposase_Tc1-like,pfam_Transposase_14,superfamily_Homeodomain-like,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETMAR	HGNC	ENSG00000170364				24	0	0	18	7	28
ZNF197	0	genome.wustl.edu	37	3	44673683	44673683	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	44673683	44673683	C	T	SNP	ZNF197	ENST00000344387	human	ensembl	74_37	+1	known	missense	c.637	p.P213S	1.000	superfamily_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF197	HGNC	ENSG00000186448				148	0	0	109	45	29.2208
ZNF35	0	genome.wustl.edu	37	3	44700823	44700823	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	44700823	44700823	G	A	SNP	ZNF35	ENST00000396056	human	ensembl	74_37	+1	known	missense	c.968	p.R323Q	0.008	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF35	HGNC	ENSG00000169981				64	0	0	49	11	18.3333
PLXNB1	0	genome.wustl.edu	37	3	48455369	48455369	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	48455369	48455369	C	T	SNP	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	missense	c.4321	p.V1441M	0.000	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050				41	0	0	34	18	34.6154
CELSR3	0	genome.wustl.edu	37	3	48694482	48694482	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	48694482	48694482	C	T	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.4048	p.E1350K	1.000	NULL	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				65	0	0	36	13	26.5306
IMPDH2	0	genome.wustl.edu	37	3	49063765	49063765	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	49063765	49063765	G	A	SNP	IMPDH2	ENST00000326739	human	ensembl	74_37	-1	known	missense	c.998	p.T333M	1.000	pfam_IMP_DH_GMPRt,pfam_2Npropane_dOase,pfam_FMN-dep_DH,pfam_NanE,pirsf_IMP_DH,tigrfam_IMP_DH	pfam_IMP_DH_GMPRt,pfam_CBS_dom,pfam_2Npropane_dOase,pfam_FMN-dep_DH,pfam_NanE,smart_CBS_dom,pirsf_IMP_DH,tigrfam_IMP_DH	-	no_errors	IMPDH2	HGNC	ENSG00000178035				11	0	0	16	7	30.4348
LAMB2	0	genome.wustl.edu	37	3	49166502	49166502	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	49166502	49166502	C	T	SNP	LAMB2	ENST00000305544	human	ensembl	74_37	-1	known	missense	c.1682	p.R561Q	1.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_Laminin_IV	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037				89	0	0	73	17	18.8889
DAG1	0	genome.wustl.edu	37	3	49568441	49568441	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	49568441	49568441	C	T	SNP	DAG1	ENST00000308775	human	ensembl	74_37	+1	known	missense	c.497	p.S166L	0.995	NULL	pfam_DAG1,superfamily_Alpha-dystroglycan_domain_2,superfamily_Cadherin-like,smart_Cadg	-	no_errors	DAG1	HGNC	ENSG00000173402				55	0	0	43	16	27.1186
APEH	0	genome.wustl.edu	37	3	49719798	49719798	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	49719798	49719798	A	G	SNP	APEH	ENST00000296456	human	ensembl	74_37	+1	known	missense	c.1621	p.T541A	0.935	pfam_Peptidase_S9	pfam_Peptidase_S9,pfam_AB_hydrolase_1,pfam_Dienelactn_hydro	-	no_errors	APEH	HGNC	ENSG00000164062				36	0	0	20	6	23.0769
MST1	0	genome.wustl.edu	37	3	49723511	49723511	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	49723511	49723511	G	A	SNP	MST1	ENST00000449682	human	ensembl	74_37	-1	known	silent	c.1131	p.D377	0.992	superfamily_Kringle-like,smart_Kringle	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	MST1	HGNC	ENSG00000173531				39	0	0	13	9	40.9091
RBM6	0	genome.wustl.edu	37	3	50095924	50095924	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	50095924	50095924	G	A	SNP	RBM6	ENST00000266022	human	ensembl	74_37	+1	known	missense	c.2059	p.V687I	0.998	smart_RRM_dom	pfam_G_patch_dom,smart_RRM_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM6	HGNC	ENSG00000004534				119	0	0	99	46	31.7241
SLC38A3	0	genome.wustl.edu	37	3	50252140	50252140	+	RNA	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	50252140	50252140	T	C	SNP	SLC38A3	ENST00000414604	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SLC38A3	HGNC	ENSG00000188338				26	0	0	14	6	30
GNAI2	0	genome.wustl.edu	37	3	50294216	50294216	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	50294216	50294216	G	A	SNP	GNAI2	ENST00000313601	human	ensembl	74_37	+1	known	missense	c.655	p.V219I	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I,prints_Fungi_Gprotein_alpha	-	no_errors	GNAI2	HGNC	ENSG00000114353				118	0	0	74	13	14.9425
IFRD2	0	genome.wustl.edu	37	3	50326272	50326272	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	50326272	50326272	G	A	SNP	IFRD2	ENST00000336089	human	ensembl	74_37	-1	known	missense	c.1480	p.R494C	1.000	pfam_Interferon-rel_develop_reg_N	pfam_Interferon-rel_develop_reg_N,pfam_Interferon-rel_develop_reg_C,superfamily_ARM-type_fold	-	no_errors	IFRD2	HGNC	ENSG00000214706				34	0	0	28	10	26.3158
HYAL1	0	genome.wustl.edu	37	3	50339708	50339708	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	50339708	50339708	G	A	SNP	HYAL1	ENST00000266031	human	ensembl	74_37	-1	known	missense	c.680	p.A227V	0.000	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL1	HGNC	ENSG00000114378				50	0	0	37	6	13.9535
GRM2	0	genome.wustl.edu	37	3	51746849	51746849	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	51746849	51746849	C	T	SNP	GRM2	ENST00000395052	human	ensembl	74_37	+1	known	missense	c.811	p.R271C	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM2	HGNC	ENSG00000164082				62	0	0	40	15	27.2727
ACY1	0	genome.wustl.edu	37	3	52022841	52022841	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	52022841	52022841	C	T	SNP	ACY1	ENST00000458031	human	ensembl	74_37	+1	known	missense	c.1331	p.A444V	0.714	pfam_Peptidase_M20,tigrfam_N-acyl_aa_amidohydrolase	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,tigrfam_N-acyl_aa_amidohydrolase	-	no_errors	ACY1	HGNC	ENSG00000243989				288	0	0	187	50	21.097
PBRM1	0	genome.wustl.edu	37	3	52651369	52651369	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	52651369	52651369	C	T	SNP	PBRM1	ENST00000296302	human	ensembl	74_37	-1	known	missense	c.1727	p.R576H	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_Bromodomain,pfam_BAH_dom,pfam_HMG_box_dom,superfamily_Bromodomain,superfamily_HMG_box_dom,smart_Bromodomain,smart_BAH_dom,smart_HMG_box_dom,pfscan_BAH_dom,pfscan_HMG_box_dom,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	PBRM1	HGNC	ENSG00000163939				46	0	0	34	16	32
NEK4	0	genome.wustl.edu	37	3	52799920	52799920	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	52799920	52799920	G	A	SNP	NEK4	ENST00000233027	human	ensembl	74_37	-1	known	missense	c.649	p.R217W	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK4	HGNC	ENSG00000114904				52	0	0	39	6	13.3333
TKT	0	genome.wustl.edu	37	3	53263294	53263294	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	53263294	53263294	A	G	SNP	TKT	ENST00000423525	human	ensembl	74_37	-1	known	splice_site	c.1264+2	e9+2	1.000	-	-	-	no_errors	TKT	HGNC	ENSG00000163931				37	0	0	21	6	22.2222
FAM208A	0	genome.wustl.edu	37	3	56695019	56695019	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	56695019	56695019	A	G	SNP	FAM208A	ENST00000355628	human	ensembl	74_37	-1	known	missense	c.1187	p.V396A	1.000	NULL	pfam_DUF3715	-	no_errors	FAM208A	HGNC	ENSG00000163946				31	0	0	38	10	20.8333
FLNB	0	genome.wustl.edu	37	3	58140568	58140568	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	58140568	58140568	G	A	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.6685	p.A2229T	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				51	0	0	54	21	28
FLNB	0	genome.wustl.edu	37	3	58141758	58141758	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	58141758	58141758	G	A	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.6844	p.A2282T	0.998	superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				64	0	0	48	22	31.4286
FEZF2	0	genome.wustl.edu	37	3	62358229	62358229	+	Silent	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	62358229	62358229	T	G	SNP	FEZF2	ENST00000283268	human	ensembl	74_37	-1	known	silent	c.315	p.G105	0.964	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	FEZF2	HGNC	ENSG00000153266				16	0	0	7	4	36.3636
EOGT	0	genome.wustl.edu	37	3	69026835	69026835	+	Silent	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	69026835	69026835	A	T	SNP	EOGT	ENST00000383701	human	ensembl	74_37	-1	known	silent	c.1518	p.L506	0.969	NULL	pfam_Glycosyltransferase_AER61	-	no_errors	EOGT	HGNC	ENSG00000163378				38	0	0	33	19	36.5385
MITF	0	genome.wustl.edu	37	3	70008549	70008549	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	70008549	70008549	G	A	SNP	MITF	ENST00000448226	human	ensembl	74_37	+1	known	missense	c.1157	p.R386Q	1.000	NULL	pfam_bHLH_ZIP_TF_MiT/TFE,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MITF	HGNC	ENSG00000187098				29	0	0	23	9	28.125
SHQ1	0	genome.wustl.edu	37	3	72881584	72881584	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	72881584	72881584	C	T	SNP	SHQ1	ENST00000325599	human	ensembl	74_37	-1	known	missense	c.535	p.A179T	0.253	NULL	pfam_SHQ1,superfamily_HSP20-like_chaperone,pfscan_CS_dom	-	no_errors	SHQ1	HGNC	ENSG00000144736				71	0	0	73	24	24.7423
SRGAP3	0	genome.wustl.edu	37	3	9027576	9027576	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	9027576	9027576	C	T	SNP	SRGAP3	ENST00000383836	human	ensembl	74_37	-1	known	missense	c.2927	p.R976Q	1.000	NULL	pfam_RhoGAP_dom,pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_FCH_dom,smart_RhoGAP_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	SRGAP3	HGNC	ENSG00000196220				61	0	0	53	17	24.2857
SRGAP3	0	genome.wustl.edu	37	3	9036154	9036154	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	9036154	9036154	G	A	SNP	SRGAP3	ENST00000383836	human	ensembl	74_37	-1	known	missense	c.2281	p.R761C	0.997	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_RhoGAP_dom,pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_FCH_dom,smart_RhoGAP_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	SRGAP3	HGNC	ENSG00000196220				102	0	0	71	15	17.4419
EPHA6	0	genome.wustl.edu	37	3	97467487	97467487	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	97467487	97467487	G	A	SNP	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	missense	c.3335	p.S1112N	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224				29	0	0	15	9	37.5
CRYBG3	0	genome.wustl.edu	37	3	97614862	97614862	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	97614862	97614862	A	T	SNP	CRYBG3	ENST00000182096	human	ensembl	74_37	+1	known	missense	c.1790	p.D597V	1.000	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBG3	HGNC	ENSG00000080200				55	0	0	55	21	27.6316
SLC9B1	0	genome.wustl.edu	37	4	103911069	103911069	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	103911069	103911069	A	G	SNP	SLC9B1	ENST00000296422	human	ensembl	74_37	-1	known	missense	c.99	p.Q33H	0.000	NULL	pfam_Cation/H_exchanger	-	no_errors	SLC9B1	HGNC	ENSG00000164037				23	0	0	15	13	46.4286
SLC9B2	0	genome.wustl.edu	37	4	103947672	103947672	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	103947672	103947672	A	G	SNP	SLC9B2	ENST00000362026	human	ensembl	74_37	-1	known	missense	c.1469	p.V490A	1.000	pfam_Cation/H_exchanger	pfam_Cation/H_exchanger	-	no_errors	SLC9B2	HGNC	ENSG00000164038				64	0	0	56	21	27.2727
CENPE	0	genome.wustl.edu	37	4	104066443	104066443	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	104066443	104066443	T	C	SNP	CENPE	ENST00000265148	human	ensembl	74_37	-1	known	missense	c.4621	p.S1541G	0.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_STAT_TF_coiled-coil,superfamily_Signal_recog_particl_SRP54_hlx,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	CENPE	HGNC	ENSG00000138778				19	0	0	16	7	30.4348
ALPK1	0	genome.wustl.edu	37	4	113353409	113353409	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	113353409	113353409	C	T	SNP	ALPK1	ENST00000177648	human	ensembl	74_37	+1	known	silent	c.2706	p.S902	0.000	NULL	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	ALPK1	HGNC	ENSG00000073331				156	0	0	131	55	29.5699
HS3ST1	0	genome.wustl.edu	37	4	11400811	11400811	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	11400811	11400811	C	T	SNP	HS3ST1	ENST00000002596	human	ensembl	74_37	-1	known	silent	c.819	p.A273	0.034	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST1	HGNC	ENSG00000002587				105	0	0	82	34	29.3103
ANK2	0	genome.wustl.edu	37	4	114158319	114158319	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	114158319	114158319	A	G	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	silent	c.660	p.V220	0.003	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				121	0	0	101	31	23.4848
ANK2	0	genome.wustl.edu	37	4	114290831	114290831	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	114290831	114290831	A	G	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	missense	c.11480	p.Q3827R	0.943	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				70	0	0	62	19	23.4568
PDE5A	0	genome.wustl.edu	37	4	120528266	120528266	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	120528266	120528266	A	G	SNP	PDE5A	ENST00000354960	human	ensembl	74_37	-1	known	silent	c.339	p.I113	0.936	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE5A	HGNC	ENSG00000138735				52	0	0	56	19	25.3333
TNIP3	0	genome.wustl.edu	37	4	122078294	122078294	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	122078294	122078294	G	A	SNP	TNIP3	ENST00000057513	human	ensembl	74_37	-1	known	silent	c.318	p.D106	0.036	NULL	NULL	-	no_errors	TNIP3	HGNC	ENSG00000050730				350	0	0	315	95	23.1707
KIAA1109	0	genome.wustl.edu	37	4	123117917	123117917	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	123117917	123117917	A	G	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.1180	p.T394A	1.000	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688				46	0	0	58	8	12.1212
NUDT6	0	genome.wustl.edu	37	4	123814062	123814062	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	123814062	123814062	G	A	SNP	NUDT6	ENST00000304430	human	ensembl	74_37	-1	known	missense	c.872	p.A291V	1.000	superfamily_NUDIX_hydrolase_dom-like,prints_Nudix_hydrolase6-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,prints_Nudix_hydrolase6-like	-	no_errors	NUDT6	HGNC	ENSG00000170917				47	0	0	59	21	26.25
FAT4	0	genome.wustl.edu	37	4	126238149	126238149	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	126238149	126238149	G	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.583	p.G195S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				42	0	0	35	10	22.2222
LARP1B	0	genome.wustl.edu	37	4	129012197	129012197	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	129012197	129012197	G	A	SNP	LARP1B	ENST00000326639	human	ensembl	74_37	+1	known	missense	c.400	p.V134I	0.961	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1B	HGNC	ENSG00000138709				66	0	0	59	23	28.0488
PCDH10	0	genome.wustl.edu	37	4	134071927	134071927	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	134071927	134071927	G	T	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	missense	c.632	p.G211V	0.948	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650				57	0	0	50	18	26.4706
CRIPAK	0	genome.wustl.edu	37	4	1388396	1388396	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	1388396	1388396	C	A	SNP	CRIPAK	ENST00000324803	human	ensembl	74_37	+1	known	missense	c.97	p.P33T	0.009	NULL	smart_Post-SET_dom	-	no_errors	CRIPAK	HGNC	ENSG00000179979				404	0	0	313	104	24.94
MAML3	0	genome.wustl.edu	37	4	140811117	140811117	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	140811117	140811117	C	T	SNP	MAML3	ENST00000509479	human	ensembl	74_37	-1	known	silent	c.1473	p.Q491	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML3	HGNC	ENSG00000196782				61	0	0	54	14	20.5882
TBC1D9	0	genome.wustl.edu	37	4	141590794	141590794	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	141590794	141590794	C	T	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	silent	c.1431	p.P477	0.174	NULL	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436				27	0	0	23	6	20.6897
RNF150	0	genome.wustl.edu	37	4	141888838	141888838	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	141888838	141888838	G	A	SNP	RNF150	ENST00000515673	human	ensembl	74_37	-1	known	missense	c.674	p.A225V	1.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF150	HGNC	ENSG00000170153				81	0	0	79	27	25.4717
OTUD4	0	genome.wustl.edu	37	4	146071816	146071816	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	146071816	146071816	G	A	SNP	OTUD4	ENST00000447906	human	ensembl	74_37	-1	known	missense	c.1108	p.P370S	1.000	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD4	HGNC	ENSG00000164164				46	0	0	50	17	25.3731
TLR2	0	genome.wustl.edu	37	4	154626008	154626008	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	154626008	154626008	G	A	SNP	TLR2	ENST00000260010	human	ensembl	74_37	+1	known	missense	c.1949	p.R650Q	0.000	pirsf_Toll-like_receptor,pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR2	HGNC	ENSG00000137462				68	0	0	46	18	28.125
FGB	0	genome.wustl.edu	37	4	155487066	155487066	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	155487066	155487066	G	A	SNP	FGB	ENST00000302068	human	ensembl	74_37	+1	known	missense	c.221	p.R74H	1.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,pfam_Fibrinogen_a/b/g_coil_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGB	HGNC	ENSG00000171564				58	0	0	57	19	25
LRAT	0	genome.wustl.edu	37	4	155665965	155665965	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	155665965	155665965	C	T	SNP	LRAT	ENST00000336356	human	ensembl	74_37	+1	known	missense	c.487	p.H163Y	1.000	pfam_LRAT-like_dom	pfam_LRAT-like_dom	-	no_errors	LRAT	HGNC	ENSG00000121207				125	0	0	86	34	28.3333
PDGFC	0	genome.wustl.edu	37	4	157771444	157771444	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	157771444	157771444	C	A	SNP	PDGFC	ENST00000502773	human	ensembl	74_37	-1	known	missense	c.243	p.E81D	0.132	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_PDGF/VEGF_dom,superfamily_CUB_dom,smart_CUB_dom,smart_PDGF/VEGF_dom,pfscan_CUB_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PDGFC	HGNC	ENSG00000145431				37	0	0	33	7	17.5
FAM198B	0	genome.wustl.edu	37	4	159091752	159091752	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	159091752	159091752	C	T	SNP	FAM198B	ENST00000393807	human	ensembl	74_37	-1	known	missense	c.776	p.R259H	0.001	NULL	NULL	-	no_errors	FAM198B	HGNC	ENSG00000164125				49	0	0	58	19	24.6753
FGFBP1	0	genome.wustl.edu	37	4	15937783	15937783	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	15937783	15937783	T	C	SNP	FGFBP1	ENST00000259988	human	ensembl	74_37	-1	known	missense	c.473	p.N158S	0.000	pfam_FGF1-bd	pfam_FGF1-bd	-	no_errors	FGFBP1	HGNC	ENSG00000137440				76	0	0	57	15	20.8333
FSTL5	0	genome.wustl.edu	37	4	162307295	162307295	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	162307295	162307295	T	C	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	silent	c.2148	p.V716	0.998	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843				54	0	0	49	22	30.9859
NPY5R	0	genome.wustl.edu	37	4	164272119	164272119	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	164272119	164272119	A	G	SNP	NPY5R	ENST00000338566	human	ensembl	74_37	+1	known	missense	c.694	p.T232A	1.000	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_NPY5_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	NPY5R	HGNC	ENSG00000164129				60	0	0	57	21	26.9231
CLRN2	0	genome.wustl.edu	37	4	17517055	17517055	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	17517055	17517055	A	G	SNP	CLRN2	ENST00000511148	human	ensembl	74_37	+1	known	missense	c.166	p.K56E	0.994	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin	-	no_errors	CLRN2	HGNC	ENSG00000249581				64	0	0	44	11	20
WDR17	0	genome.wustl.edu	37	4	177052881	177052881	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	177052881	177052881	A	G	SNP	WDR17	ENST00000280190	human	ensembl	74_37	+1	known	missense	c.1162	p.R388G	0.998	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR17	HGNC	ENSG00000150627				151	0	0	133	43	24.4318
FGFR3	0	genome.wustl.edu	37	4	1801006	1801006	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	1801006	1801006	G	A	SNP	FGFR3	ENST00000340107	human	ensembl	74_37	+1	known	silent	c.135	p.Q45	0.885	pirsf_FGF_rcpt_fam,pfscan_Ig-like_dom	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR3	HGNC	ENSG00000068078				144	0	0	102	35	25.5474
ENPP6	0	genome.wustl.edu	37	4	185018479	185018479	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	185018479	185018479	G	A	SNP	ENPP6	ENST00000296741	human	ensembl	74_37	-1	known	missense	c.1036	p.R346W	0.000	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP6	HGNC	ENSG00000164303				80	0	0	66	20	23.2558
ACSL1	0	genome.wustl.edu	37	4	185687129	185687129	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	185687129	185687129	G	A	SNP	ACSL1	ENST00000281455	human	ensembl	74_37	-1	known	silent	c.1275	p.G425	0.288	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL1	HGNC	ENSG00000151726				70	0	0	46	15	24.5902
ACSL1	0	genome.wustl.edu	37	4	185689544	185689544	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	185689544	185689544	T	C	SNP	ACSL1	ENST00000281455	human	ensembl	74_37	-1	known	missense	c.1054	p.M352V	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL1	HGNC	ENSG00000151726				187	0	0	117	38	24.5161
CCDC110	0	genome.wustl.edu	37	4	186381015	186381015	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	186381015	186381015	G	A	SNP	CCDC110	ENST00000307588	human	ensembl	74_37	-1	known	silent	c.726	p.C242	0.965	NULL	superfamily_4_helix_cytokine-like_core	-	no_errors	CCDC110	HGNC	ENSG00000168491				49	0	0	45	8	15.0943
FAT1	0	genome.wustl.edu	37	4	187542246	187542246	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	187542246	187542246	C	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.5494	p.V1832I	0.918	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				39	0	0	23	11	32.3529
POLN	0	genome.wustl.edu	37	4	2209759	2209759	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	2209759	2209759	T	C	SNP	POLN	ENST00000382865	human	ensembl	74_37	-1	known	missense	c.669	p.I223M	0.886	NULL	pfam_DNA-dir_DNA_pol_A_palm_dom,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_A_palm_dom,prints_DNA_polymerase_A	-	no_errors	POLN	HGNC	ENSG00000130997				60	0	0	57	16	21.9178
SEL1L3	0	genome.wustl.edu	37	4	25849128	25849128	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	25849128	25849128	C	T	SNP	SEL1L3	ENST00000399878	human	ensembl	74_37	-1	known	missense	c.521	p.R174H	0.467	NULL	pfam_Sel1-like,superfamily_ConA-like_lec_gl_sf,smart_Sel1-like	-	no_errors	SEL1L3	HGNC	ENSG00000091490				42	0	0	26	17	39.5349
SEL1L3	0	genome.wustl.edu	37	4	25849271	25849271	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	25849271	25849271	G	A	SNP	SEL1L3	ENST00000399878	human	ensembl	74_37	-1	known	silent	c.378	p.P126	0.864	NULL	pfam_Sel1-like,superfamily_ConA-like_lec_gl_sf,smart_Sel1-like	-	no_errors	SEL1L3	HGNC	ENSG00000091490				101	0	0	73	22	23.1579
TBC1D1	0	genome.wustl.edu	37	4	38016513	38016513	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	38016513	38016513	C	T	SNP	TBC1D1	ENST00000261439	human	ensembl	74_37	+1	known	silent	c.801	p.S267	0.012	smart_PTB/PI_dom	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D1	HGNC	ENSG00000065882				46	0	0	45	15	25
LIAS	0	genome.wustl.edu	37	4	39471655	39471655	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	39471655	39471655	C	T	SNP	LIAS	ENST00000261434	human	ensembl	74_37	+1	known	missense	c.754	p.R252W	0.998	pfam_rSAM,smart_Elp3/MiaB/NifB,pirsf_Lipoyl_synth,tigrfam_Lipoyl_synth	pfam_rSAM,smart_Elp3/MiaB/NifB,pirsf_Lipoyl_synth,tigrfam_Lipoyl_synth	-	no_errors	LIAS	HGNC	ENSG00000121897				39	0	0	28	13	31.7073
ENSG00000221301	0	genome.wustl.edu	37	4	4086157	4086157	+	RNA	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	4086157	4086157	A	G	SNP	ENSG00000221301	ENST00000408374	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.085	-	-	-	no_errors	AC116562.1	Clone_based_ensembl_gene	ENSG00000221301				89	0	0	67	25	27.1739
DCAF4L1	0	genome.wustl.edu	37	4	41984202	41984202	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	41984202	41984202	C	T	SNP	DCAF4L1	ENST00000333141	human	ensembl	74_37	+1	known	silent	c.393	p.C131	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L1	HGNC	ENSG00000182308				141	0	0	106	39	26.8966
GNPDA2	0	genome.wustl.edu	37	4	44713002	44713002	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	44713002	44713002	C	T	SNP	GNPDA2	ENST00000295448	human	ensembl	74_37	-1	known	missense	c.562	p.V188I	1.000	pfam_Glc/Gal-6P_isomerase,tigrfam_Glucosamine6P_isomerase	pfam_Glc/Gal-6P_isomerase,tigrfam_Glucosamine6P_isomerase	-	no_errors	GNPDA2	HGNC	ENSG00000163281				77	0	0	78	23	22.7723
ATP10D	0	genome.wustl.edu	37	4	47537590	47537590	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	47537590	47537590	A	G	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	missense	c.841	p.I281V	0.956	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246				81	0	0	77	19	19.7917
CORIN	0	genome.wustl.edu	37	4	47645224	47645224	+	Silent	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	47645224	47645224	T	G	SNP	CORIN	ENST00000273857	human	ensembl	74_37	-1	known	silent	c.2007	p.S669	0.011	pirsf_Peptidase_S1A_corin,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pirsf_Peptidase_S1A_corin,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_Frizzled_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_Frizzled_dom,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,prints_LDrepeatLR_classA_rpt,prints_Peptidase_S1A,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	CORIN	HGNC	ENSG00000145244				102	0	0	82	20	19.6078
SLC10A4	0	genome.wustl.edu	37	4	48490652	48490652	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	48490652	48490652	G	A	SNP	SLC10A4	ENST00000273861	human	ensembl	74_37	+1	known	missense	c.1010	p.G337D	1.000	NULL	pfam_BilAc/Na_symport	-	no_errors	SLC10A4	HGNC	ENSG00000145248				110	0	0	89	27	23.2759
KDR	0	genome.wustl.edu	37	4	55962504	55962504	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	55962504	55962504	C	T	SNP	KDR	ENST00000263923	human	ensembl	74_37	-1	known	missense	c.2620	p.A874T	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR2_rcpt	-	no_errors	KDR	HGNC	ENSG00000128052				34	0	0	30	8	21.0526
CLOCK	0	genome.wustl.edu	37	4	56325419	56325419	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	56325419	56325419	T	C	SNP	CLOCK	ENST00000309964	human	ensembl	74_37	-1	known	missense	c.569	p.Q190R	1.000	NULL	pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom,prints_Nuc_translocat	-	no_errors	CLOCK	HGNC	ENSG00000134852				18	0	0	19	9	32.1429
REST	0	genome.wustl.edu	37	4	57797474	57797474	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	57797474	57797474	G	A	SNP	REST	ENST00000309042	human	ensembl	74_37	+1	known	missense	c.2450	p.R817Q	0.005	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	REST	HGNC	ENSG00000084093				193	1	0.515464	173	59	25.431
LPHN3	0	genome.wustl.edu	37	4	62758468	62758468	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	62758468	62758468	G	A	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	+1	known	silent	c.1575	p.P525	0.006	NULL	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471				95	0	0	91	39	30
STAP1	0	genome.wustl.edu	37	4	68472069	68472069	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	68472069	68472069	T	C	SNP	STAP1	ENST00000265404	human	ensembl	74_37	+1	known	silent	c.882	p.I294	0.000	NULL	pfam_SH2,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_SH2	-	no_errors	STAP1	HGNC	ENSG00000035720				22	0	0	18	5	21.7391
UBA6	0	genome.wustl.edu	37	4	68536260	68536260	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	68536260	68536260	G	A	SNP	UBA6	ENST00000322244	human	ensembl	74_37	-1	known	silent	c.597	p.F199	0.425	superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA6	HGNC	ENSG00000033178				62	0	0	54	6	10
UGT2A3	0	genome.wustl.edu	37	4	69817370	69817370	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	69817370	69817370	G	A	SNP	UGT2A3	ENST00000251566	human	ensembl	74_37	-1	known	missense	c.109	p.L37F	0.934	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2A3	HGNC	ENSG00000135220				101	0	0	105	9	7.89474
TBC1D14	0	genome.wustl.edu	37	4	7000928	7000928	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	7000928	7000928	A	G	SNP	TBC1D14	ENST00000409757	human	ensembl	74_37	+1	known	missense	c.1162	p.M388V	0.993	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D14	HGNC	ENSG00000132405				60	0	0	37	15	28.8462
PPBP	0	genome.wustl.edu	37	4	74853683	74853683	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	74853683	74853683	C	T	SNP	PPBP	ENST00000296028	human	ensembl	74_37	-1	known	silent	c.138	p.A46	0.000	superfamily_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	-	no_errors	PPBP	HGNC	ENSG00000163736				93	0	0	91	32	26.0163
MTHFD2L	0	genome.wustl.edu	37	4	75147154	75147154	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	75147154	75147154	T	C	SNP	MTHFD2L	ENST00000395759	human	ensembl	74_37	+1	known	missense	c.818	p.L273S	0.997	pfam_THF_DH/CycHdrlase_NAD-bd_dom,prints_THF_DH/CycHdrlase	pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD2L	HGNC	ENSG00000163738				79	0	0	68	20	22.7273
USO1	0	genome.wustl.edu	37	4	76725285	76725285	+	Splice_Site	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	76725285	76725285	A	T	SNP	USO1	ENST00000538159	human	ensembl	74_37	+1	known	splice_site	c.2014-2	e19-2	0.999	-	-	-	no_errors	USO1	HGNC	ENSG00000138768				28	0	0	24	6	20
PPEF2	0	genome.wustl.edu	37	4	76787404	76787404	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	76787404	76787404	C	T	SNP	PPEF2	ENST00000286719	human	ensembl	74_37	-1	known	missense	c.1858	p.D620N	0.001	pirsf_Ser/Thr-Pase_EF-hand_contain	pirsf_Ser/Thr-Pase_EF-hand_contain,pfam_PEstase_dom,pfam_PPP_dom,smart_Ser/Thr-sp_prot-phosphatase,smart_EF_hand_dom,prints_Ser/Thr-sp_prot-phosphatase,pfscan_EF_hand_dom	-	no_errors	PPEF2	HGNC	ENSG00000156194				90	0	0	104	31	22.963
PPEF2	0	genome.wustl.edu	37	4	76804135	76804135	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	76804135	76804135	C	T	SNP	PPEF2	ENST00000286719	human	ensembl	74_37	-1	known	missense	c.877	p.G293S	1.000	pirsf_Ser/Thr-Pase_EF-hand_contain,pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	pirsf_Ser/Thr-Pase_EF-hand_contain,pfam_PEstase_dom,pfam_PPP_dom,smart_Ser/Thr-sp_prot-phosphatase,smart_EF_hand_dom,prints_Ser/Thr-sp_prot-phosphatase,pfscan_EF_hand_dom	-	no_errors	PPEF2	HGNC	ENSG00000156194				63	0	0	46	20	30.303
NAAA	0	genome.wustl.edu	37	4	76836136	76836136	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	76836136	76836136	A	G	SNP	NAAA	ENST00000286733	human	ensembl	74_37	-1	known	missense	c.1001	p.F334S	0.000	pirsf_Acid_ceramidase-like	pfam_Chologlycine_hydro,pirsf_Acid_ceramidase-like	-	no_errors	NAAA	HGNC	ENSG00000138744				47	0	0	45	16	26.2295
AFAP1-AS1	0	genome.wustl.edu	37	4	7774812	7774812	+	RNA	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	7774812	7774812	C	A	SNP	AFAP1-AS1	ENST00000608442	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AFAP1-AS1	HGNC	ENSG00000272620				10	0	0	7	6	46.1538
PRDM8	0	genome.wustl.edu	37	4	81124482	81124482	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	81124482	81124482	C	T	SNP	PRDM8	ENST00000339711	human	ensembl	74_37	+1	known	silent	c.1866	p.P622	0.971	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM8	HGNC	ENSG00000152784				37	0	0	32	6	15.7895
SH3TC1	0	genome.wustl.edu	37	4	8229123	8229123	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	8229123	8229123	C	T	SNP	SH3TC1	ENST00000245105	human	ensembl	74_37	+1	known	missense	c.1702	p.R568W	0.638	smart_TPR_repeat	superfamily_SH3_domain,smart_SH3_domain,smart_TPR_repeat,pfscan_SH3_domain	-	no_errors	SH3TC1	HGNC	ENSG00000125089				82	0	0	42	20	32.2581
HPSE	0	genome.wustl.edu	37	4	84243432	84243432	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	84243432	84243432	C	T	SNP	HPSE	ENST00000311412	human	ensembl	74_37	-1	known	missense	c.313	p.D105N	1.000	superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE	HGNC	ENSG00000173083				22	0	0	30	9	23.0769
CPZ	0	genome.wustl.edu	37	4	8603004	8603004	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	8603004	8603004	G	A	SNP	CPZ	ENST00000360986	human	ensembl	74_37	+1	known	silent	c.276	p.Q92	0.998	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Peptidase_M14,pfam_Frizzled_dom,superfamily_Frizzled_dom,superfamily_CarboxyPept-like_regulatory,smart_Frizzled_dom,smart_Peptidase_M14,prints_Peptidase_M14,pfscan_Frizzled_dom	-	no_errors	CPZ	HGNC	ENSG00000109625				62	0	0	39	12	23.5294
AFF1	0	genome.wustl.edu	37	4	88035747	88035747	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	88035747	88035747	G	A	SNP	AFF1	ENST00000395146	human	ensembl	74_37	+1	known	missense	c.1762	p.G588R	0.480	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF1	HGNC	ENSG00000172493				25	0	0	28	4	12.5
HSD17B13	0	genome.wustl.edu	37	4	88236700	88236700	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	88236700	88236700	C	T	SNP	HSD17B13	ENST00000328546	human	ensembl	74_37	-1	known	missense	c.502	p.V168I	0.998	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B13	HGNC	ENSG00000170509				29	0	0	27	5	15.625
HERC5	0	genome.wustl.edu	37	4	89384739	89384739	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	89384739	89384739	G	A	SNP	HERC5	ENST00000264350	human	ensembl	74_37	+1	known	missense	c.745	p.A249T	0.442	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_RCC1/BLIP-II,superfamily_Haem_Oase-like_multi-hlx,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC5	HGNC	ENSG00000138646				57	0	0	58	23	28.3951
PAM	0	genome.wustl.edu	37	5	102284105	102284105	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	102284105	102284105	A	G	SNP	PAM	ENST00000304400	human	ensembl	74_37	+1	known	missense	c.599	p.Y200C	1.000	superfamily_PHM/PNGase_F_dom	pfam_NHL_repeat,pfam_Cu2_ascorb_mOase_N,superfamily_PHM/PNGase_F_dom,pfscan_NHL_repeat_subgr,prints_Pep_amidat_mOase	-	no_errors	PAM	HGNC	ENSG00000145730				77	0	0	63	22	25.8824
PAM	0	genome.wustl.edu	37	5	102326056	102326056	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	102326056	102326056	A	G	SNP	PAM	ENST00000304400	human	ensembl	74_37	+1	known	missense	c.1564	p.K522E	0.000	NULL	pfam_NHL_repeat,pfam_Cu2_ascorb_mOase_N,superfamily_PHM/PNGase_F_dom,pfscan_NHL_repeat_subgr,prints_Pep_amidat_mOase	-	no_errors	PAM	HGNC	ENSG00000145730				31	0	0	31	15	32.6087
C5orf30	0	genome.wustl.edu	37	5	102612180	102612180	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	102612180	102612180	A	G	SNP	C5orf30	ENST00000319933	human	ensembl	74_37	+1	known	missense	c.560	p.Q187R	1.000	NULL	NULL	-	no_errors	C5orf30	HGNC	ENSG00000181751				42	0	0	41	13	24.0741
CMBL	0	genome.wustl.edu	37	5	10290890	10290890	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	10290890	10290890	C	T	SNP	CMBL	ENST00000510532	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CMBL	HGNC	ENSG00000164237				57	0	0	45	14	23.7288
APC	0	genome.wustl.edu	37	5	112178041	112178041	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	112178041	112178041	C	T	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	silent	c.6750	p.G2250	1.000	pfam_APC_basic_dom	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				89	0	0	63	14	18.1818
DMXL1	0	genome.wustl.edu	37	5	118485998	118485998	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	118485998	118485998	C	T	SNP	DMXL1	ENST00000539542	human	ensembl	74_37	+1	known	silent	c.4476	p.H1492	1.000	pfam_Rav1p_C	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL1	HGNC	ENSG00000172869				121	0	0	119	28	19.0476
PRR16	0	genome.wustl.edu	37	5	120021789	120021789	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	120021789	120021789	T	C	SNP	PRR16	ENST00000407149	human	ensembl	74_37	+1	known	silent	c.300	p.N100	0.932	NULL	NULL	-	no_errors	PRR16	HGNC	ENSG00000184838				140	0	0	102	38	27.1429
C5orf48	0	genome.wustl.edu	37	5	125971812	125971812	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	125971812	125971812	G	A	SNP	C5orf48	ENST00000357147	human	ensembl	74_37	+1	known	missense	c.284	p.R95H	0.684	NULL	NULL	-	no_errors	C5orf48	HGNC	ENSG00000196900				112	0	0	91	37	28.9062
MEGF10	0	genome.wustl.edu	37	5	126754877	126754877	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	126754877	126754877	C	T	SNP	MEGF10	ENST00000274473	human	ensembl	74_37	+1	known	silent	c.1371	p.G457	1.000	smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF_extracell,superfamily_Proteinase_amylase_inhib_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF10	HGNC	ENSG00000145794				124	0	0	93	34	26.7717
FBN2	0	genome.wustl.edu	37	5	127623049	127623049	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	127623049	127623049	G	A	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	silent	c.6831	p.C2277	1.000	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829				113	0	0	100	34	25.3731
FBN2	0	genome.wustl.edu	37	5	127681173	127681173	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	127681173	127681173	C	T	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	silent	c.3093	p.A1031	0.193	pirsf_FBN,pfam_TB_dom,superfamily_TB_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829				128	0	0	141	32	18.4971
ADAMTS19	0	genome.wustl.edu	37	5	128958012	128958012	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	128958012	128958012	C	T	SNP	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	missense	c.1723	p.P575S	1.000	smart_ADAM_Cys-rich	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808				50	0	0	37	17	31.4815
ADAMTS19	0	genome.wustl.edu	37	5	128983569	128983569	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	128983569	128983569	C	T	SNP	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	nonsense	c.1966	p.R656*	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808				199	0	0	135	33	19.6429
ZCCHC10	0	genome.wustl.edu	37	5	132334415	132334415	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	132334415	132334415	T	C	SNP	ZCCHC10	ENST00000324170	human	ensembl	74_37	-1	known	missense	c.373	p.S125G	0.954	NULL	superfamily_Znf_CCHC	-	no_errors	ZCCHC10	HGNC	ENSG00000155329				43	0	0	32	11	25.5814
CATSPER3	0	genome.wustl.edu	37	5	134344663	134344663	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	134344663	134344663	C	T	SNP	CATSPER3	ENST00000282611	human	ensembl	74_37	+1	known	missense	c.808	p.H270Y	0.848	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER3	HGNC	ENSG00000152705				94	0	0	71	20	21.978
NME5	0	genome.wustl.edu	37	5	137451283	137451283	+	RNA	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	137451283	137451283	A	C	SNP	NME5	ENST00000514481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	NME5	HGNC	ENSG00000112981				10	0	0	14	4	22.2222
SLC35A4	0	genome.wustl.edu	37	5	139947548	139947548	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	139947548	139947548	T	G	SNP	SLC35A4	ENST00000323146	human	ensembl	74_37	+1	known	missense	c.794	p.L265R	1.000	pfam_Nuc_sug_transpt,pirsf_UDP/CMP-sugar_transptr	pfam_Nuc_sug_transpt,pfam_DMT,pirsf_UDP/CMP-sugar_transptr	-	no_errors	SLC35A4	HGNC	ENSG00000176087				71	0	0	50	13	20.6349
PCDHA6	0	genome.wustl.edu	37	5	140208920	140208920	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140208920	140208920	G	A	SNP	PCDHA6	ENST00000529310	human	ensembl	74_37	+1	known	missense	c.1244	p.R415H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA6	HGNC	ENSG00000081842				301	0	0	262	68	20.6061
PCDHA7	0	genome.wustl.edu	37	5	140215835	140215835	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140215835	140215835	C	T	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	missense	c.1867	p.R623C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963				173	0	0	143	48	25.1309
PCDHA12	0	genome.wustl.edu	37	5	140256507	140256507	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140256507	140256507	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.1450	p.A484T	0.463	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664				199	0	0	148	49	24.8731
PCDHA13	0	genome.wustl.edu	37	5	140263263	140263263	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140263263	140263263	G	A	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	silent	c.1410	p.P470	0.002	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389				162	1	0.613497	140	64	31.3725
PCDHB3	0	genome.wustl.edu	37	5	140481929	140481929	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140481929	140481929	C	T	SNP	PCDHB3	ENST00000231130	human	ensembl	74_37	+1	known	nonsense	c.1696	p.Q566*	0.621	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB3	HGNC	ENSG00000113205				170	0	0	124	38	23.4568
PCDHB4	0	genome.wustl.edu	37	5	140503537	140503537	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140503537	140503537	G	A	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	missense	c.1957	p.A653T	0.544	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818				83	0	0	102	34	25
PCDHB8	0	genome.wustl.edu	37	5	140559250	140559250	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140559250	140559250	G	T	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	missense	c.1635	p.E545D	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322				127	0	0	110	31	21.9858
PCDHB12	0	genome.wustl.edu	37	5	140589805	140589805	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140589805	140589805	C	T	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	silent	c.1326	p.S442	0.048	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328				312	0	0	282	53	15.8209
PCDHB18	0	genome.wustl.edu	37	5	140616457	140616457	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140616457	140616457	C	T	SNP	PCDHB18	ENST00000526308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PCDHB18	HGNC	ENSG00000146001				79	0	0	68	20	22.7273
PCDHGB1	0	genome.wustl.edu	37	5	140731679	140731679	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140731679	140731679	C	T	SNP	PCDHGB1	ENST00000523390	human	ensembl	74_37	+1	known	missense	c.1852	p.R618C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB1	HGNC	ENSG00000254221				39	0	0	33	13	28.2609
PCDHGA5	0	genome.wustl.edu	37	5	140744719	140744719	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140744719	140744719	C	T	SNP	PCDHGA5	ENST00000518069	human	ensembl	74_37	+1	known	silent	c.822	p.N274	0.266	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA5	HGNC	ENSG00000253485				82	0	0	63	21	25
PCDHGA6	0	genome.wustl.edu	37	5	140755384	140755384	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140755384	140755384	G	A	SNP	PCDHGA6	ENST00000517434	human	ensembl	74_37	+1	known	silent	c.1734	p.A578	0.046	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA6	HGNC	ENSG00000253731				297	1	0.33557	237	78	24.7619
PCDHGA10	0	genome.wustl.edu	37	5	140792938	140792938	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140792938	140792938	C	T	SNP	PCDHGA10	ENST00000398610	human	ensembl	74_37	+1	known	missense	c.196	p.R66C	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA10	HGNC	ENSG00000253846				185	0	0	152	53	25.8537
PCDHGB7	0	genome.wustl.edu	37	5	140798759	140798759	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140798759	140798759	G	A	SNP	PCDHGB7	ENST00000398594	human	ensembl	74_37	+1	known	missense	c.1333	p.V445I	0.976	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB7	HGNC	ENSG00000254122				83	0	0	73	19	20.6522
PCDHGA11	0	genome.wustl.edu	37	5	140801792	140801792	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140801792	140801792	C	T	SNP	PCDHGA11	ENST00000398587	human	ensembl	74_37	+1	known	missense	c.998	p.T333M	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873				60	0	0	64	14	17.9487
PCDHGC3	0	genome.wustl.edu	37	5	140855830	140855830	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140855830	140855830	C	T	SNP	PCDHGC3	ENST00000308177	human	ensembl	74_37	+1	known	silent	c.147	p.N49	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC3	HGNC	ENSG00000240184				154	0	0	122	49	28.655
RELL2	0	genome.wustl.edu	37	5	141017821	141017821	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	141017821	141017821	C	T	SNP	RELL2	ENST00000297164	human	ensembl	74_37	+1	known	missense	c.29	p.P10L	1.000	NULL	pfam_TNF_rcpt_RELT	-	no_errors	RELL2	HGNC	ENSG00000164620				234	0	0	184	28	13.2075
KIAA0141	0	genome.wustl.edu	37	5	141313044	141313044	+	RNA	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	141313044	141313044	T	C	SNP	KIAA0141	ENST00000506775	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KIAA0141	HGNC	ENSG00000081791				30	0	0	15	16	51.6129
PPP2R2B	0	genome.wustl.edu	37	5	146257587	146257587	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	146257587	146257587	G	A	SNP	PPP2R2B	ENST00000394414	human	ensembl	74_37	-1	known	silent	c.246	p.R82	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2B	HGNC	ENSG00000156475				29	0	0	37	9	19.5652
ANKH	0	genome.wustl.edu	37	5	14758594	14758594	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	14758594	14758594	C	T	SNP	ANKH	ENST00000284268	human	ensembl	74_37	-1	known	missense	c.427	p.A143T	1.000	pfam_ANKH	pfam_ANKH	-	no_errors	ANKH	HGNC	ENSG00000154122				36	0	0	48	10	17.2414
NMUR2	0	genome.wustl.edu	37	5	151784218	151784218	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	151784218	151784218	G	A	SNP	NMUR2	ENST00000255262	human	ensembl	74_37	-1	known	missense	c.457	p.R153C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NeuromedU_rcpt_2	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NeuromedU_rcpt_2,prints_NeuromedU_rcpt,prints_GPCR_Rhodpsn	-	no_errors	NMUR2	HGNC	ENSG00000132911				118	0	0	74	32	30.1887
GRIA1	0	genome.wustl.edu	37	5	153030057	153030057	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	153030057	153030057	A	G	SNP	GRIA1	ENST00000448073	human	ensembl	74_37	+1	known	missense	c.658	p.N220D	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511				60	0	0	46	13	22.0339
GRIA1	0	genome.wustl.edu	37	5	153085522	153085522	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	153085522	153085522	G	A	SNP	GRIA1	ENST00000448073	human	ensembl	74_37	+1	known	missense	c.1748	p.G583E	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511				82	0	0	76	24	24
CNOT8	0	genome.wustl.edu	37	5	154250333	154250333	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	154250333	154250333	A	T	SNP	CNOT8	ENST00000285896	human	ensembl	74_37	+1	known	missense	c.424	p.T142S	1.000	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	-	no_errors	CNOT8	HGNC	ENSG00000155508				119	0	0	117	36	23.5294
SGCD	0	genome.wustl.edu	37	5	156186283	156186283	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	156186283	156186283	C	T	SNP	SGCD	ENST00000337851	human	ensembl	74_37	+1	known	missense	c.755	p.T252M	0.996	pfam_Sarcoglycan	pfam_Sarcoglycan	-	no_errors	SGCD	HGNC	ENSG00000170624				92	0	0	71	18	20.2247
ADRA1B	0	genome.wustl.edu	37	5	159399041	159399041	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	159399041	159399041	G	A	SNP	ADRA1B	ENST00000306675	human	ensembl	74_37	+1	known	missense	c.1105	p.G369S	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA1B_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRA1B	HGNC	ENSG00000170214				37	0	0	28	17	37.7778
ATP10B	0	genome.wustl.edu	37	5	160044942	160044942	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	160044942	160044942	G	A	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	nonsense	c.2455	p.R819*	0.016	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322				87	0	0	45	23	33.8235
MARCH11	0	genome.wustl.edu	37	5	16091068	16091068	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	16091068	16091068	C	T	SNP	MARCH11	ENST00000332432	human	ensembl	74_37	-1	known	silent	c.816	p.V272	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH11	HGNC	ENSG00000183654				30	0	0	19	8	29.6296
SH3PXD2B	0	genome.wustl.edu	37	5	171766919	171766919	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	171766919	171766919	A	G	SNP	SH3PXD2B	ENST00000311601	human	ensembl	74_37	-1	known	missense	c.1190	p.V397A	1.000	pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,pfam_SH3-like_bac-type,pfam_DUF1058,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2B	HGNC	ENSG00000174705				41	0	0	31	7	18.4211
STC2	0	genome.wustl.edu	37	5	172755134	172755134	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	172755134	172755134	C	T	SNP	STC2	ENST00000265087	human	ensembl	74_37	-1	known	silent	c.63	p.P21	0.038	pfam_Stanniocalcin	pfam_Stanniocalcin	-	no_errors	STC2	HGNC	ENSG00000113739				143	0	0	99	29	22.6562
CDHR2	0	genome.wustl.edu	37	5	176017111	176017111	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	176017111	176017111	A	G	SNP	CDHR2	ENST00000261944	human	ensembl	74_37	+1	known	missense	c.3239	p.Y1080C	0.122	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR2	HGNC	ENSG00000074276				388	0	0	278	104	27.2251
GPRIN1	0	genome.wustl.edu	37	5	176025264	176025264	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	176025264	176025264	C	T	SNP	GPRIN1	ENST00000303991	human	ensembl	74_37	-1	known	silent	c.1572	p.S524	0.000	NULL	NULL	-	no_errors	GPRIN1	HGNC	ENSG00000169258				102	0	0	70	18	20.4545
UNC5A	0	genome.wustl.edu	37	5	176289759	176289759	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	176289759	176289759	C	T	SNP	UNC5A	ENST00000329542	human	ensembl	74_37	+1	known	missense	c.205	p.P69S	0.997	NULL	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5A	HGNC	ENSG00000113763				224	0	0	173	51	22.7679
B4GALT7	0	genome.wustl.edu	37	5	177035941	177035941	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	177035941	177035941	T	C	SNP	B4GALT7	ENST00000029410	human	ensembl	74_37	+1	known	missense	c.754	p.Y252H	0.979	pfam_Galactosyl_T_C	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT7	HGNC	ENSG00000027847				94	0	0	87	14	13.8614
ADAMTS2	0	genome.wustl.edu	37	5	178770846	178770846	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	178770846	178770846	G	A	SNP	ADAMTS2	ENST00000251582	human	ensembl	74_37	-1	known	silent	c.456	p.L152	0.235	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS2,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS2	HGNC	ENSG00000087116				19	0	0	11	4	26.6667
CDH9	0	genome.wustl.edu	37	5	26881726	26881726	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	26881726	26881726	A	G	SNP	CDH9	ENST00000231021	human	ensembl	74_37	-1	known	missense	c.1889	p.V630A	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100				43	0	0	37	6	13.9535
PDZD2	0	genome.wustl.edu	37	5	32058196	32058196	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	32058196	32058196	A	G	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	silent	c.2187	p.V729	0.503	superfamily_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				34	0	0	37	11	22.9167
ZFR	0	genome.wustl.edu	37	5	32403354	32403354	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	32403354	32403354	G	A	SNP	ZFR	ENST00000265069	human	ensembl	74_37	-1	known	missense	c.1373	p.T458M	1.000	NULL	pfam_DZF,pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR	HGNC	ENSG00000056097				103	0	0	89	25	21.9298
NPR3	0	genome.wustl.edu	37	5	32712408	32712408	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	32712408	32712408	C	T	SNP	NPR3	ENST00000265074	human	ensembl	74_37	+1	known	missense	c.526	p.R176C	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_Ntpep_rcpt	-	no_errors	NPR3	HGNC	ENSG00000113389				109	0	0	91	23	20.1754
ADAMTS12	0	genome.wustl.edu	37	5	33649731	33649731	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	33649731	33649731	C	T	SNP	ADAMTS12	ENST00000504830	human	ensembl	74_37	-1	known	missense	c.1262	p.R421H	0.995	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS12	HGNC	ENSG00000151388				68	0	0	71	14	16.4706
RAI14	0	genome.wustl.edu	37	5	34821836	34821836	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	34821836	34821836	G	A	SNP	RAI14	ENST00000515799	human	ensembl	74_37	+1	known	splice_site	c.1004-1	e13-1	1.000	-	-	-	no_errors	RAI14	HGNC	ENSG00000039560				53	0	0	50	10	16.6667
SPEF2	0	genome.wustl.edu	37	5	35705773	35705773	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	35705773	35705773	A	G	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	missense	c.2528	p.N843S	1.000	superfamily_P-loop_NTPase	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582				21	0	0	26	3	10.3448
NIPBL	0	genome.wustl.edu	37	5	36984875	36984875	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	36984875	36984875	G	A	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	silent	c.1593	p.T531	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				273	0	0	258	90	25.8621
RICTOR	0	genome.wustl.edu	37	5	38947419	38947419	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	38947419	38947419	A	G	SNP	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	missense	c.4333	p.S1445P	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327				100	0	0	81	31	27.6786
RPL37	0	genome.wustl.edu	37	5	40834687	40834687	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	40834687	40834687	C	T	SNP	RPL37	ENST00000274242	human	ensembl	74_37	-1	known	missense	c.25	p.G9R	1.000	pfam_Ribosomal_L37e,superfamily_Ribosomal_zn-bd	pfam_Ribosomal_L37e,superfamily_Ribosomal_zn-bd	-	no_errors	RPL37	HGNC	ENSG00000145592				61	0	0	61	15	19.7368
FBXO4	0	genome.wustl.edu	37	5	41927195	41927195	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	41927195	41927195	T	C	SNP	FBXO4	ENST00000281623	human	ensembl	74_37	+1	known	silent	c.270	p.N90	0.986	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO4	HGNC	ENSG00000151876				105	0	0	86	22	20.3704
PARP8	0	genome.wustl.edu	37	5	50090969	50090969	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	50090969	50090969	T	C	SNP	PARP8	ENST00000281631	human	ensembl	74_37	+1	known	silent	c.1146	p.H382	1.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP8	HGNC	ENSG00000151883				82	0	0	63	36	36.3636
IL6ST	0	genome.wustl.edu	37	5	55237207	55237207	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	55237207	55237207	A	G	SNP	IL6ST	ENST00000336909	human	ensembl	74_37	-1	known	silent	c.2460	p.S820	0.896	NULL	pfam_IgC2-like_lig-bd,pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,pfam_Growth/epo_recpt_lig-bind,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL6ST	HGNC	ENSG00000134352				110	0	0	95	23	19.4915
IL6ST	0	genome.wustl.edu	37	5	55260022	55260022	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	55260022	55260022	G	T	SNP	IL6ST	ENST00000336909	human	ensembl	74_37	-1	known	missense	c.610	p.L204I	1.000	pfam_IL-6_rcpt_alpha-bd,pfam_Growth/epo_recpt_lig-bind,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_IgC2-like_lig-bd,pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,pfam_Growth/epo_recpt_lig-bind,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL6ST	HGNC	ENSG00000134352				64	0	0	57	25	30.4878
ANKRD55	0	genome.wustl.edu	37	5	55407273	55407273	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	55407273	55407273	C	T	SNP	ANKRD55	ENST00000341048	human	ensembl	74_37	-1	known	silent	c.1302	p.T434	0.575	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD55	HGNC	ENSG00000164512				81	0	0	65	19	22.619
PDE4D	0	genome.wustl.edu	37	5	58334702	58334702	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	58334702	58334702	T	C	SNP	PDE4D	ENST00000340635	human	ensembl	74_37	-1	known	missense	c.905	p.E302G	1.000	NULL	pfam_PDEase_catalytic_dom,prints_PDEase	-	no_errors	PDE4D	HGNC	ENSG00000113448				21	0	0	11	3	21.4286
PDE4D	0	genome.wustl.edu	37	5	59284348	59284348	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	59284348	59284348	G	A	SNP	PDE4D	ENST00000502484	human	ensembl	74_37	-1	known	missense	c.239	p.P80L	1.000	NULL	pfam_PDEase_catalytic_dom,prints_PDEase	-	no_errors	PDE4D	HGNC	ENSG00000113448				58	0	0	52	19	26.7606
KIF2A	0	genome.wustl.edu	37	5	61659560	61659560	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	61659560	61659560	G	A	SNP	KIF2A	ENST00000407818	human	ensembl	74_37	+1	known	missense	c.1301	p.R434Q	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2A	HGNC	ENSG00000068796				53	0	0	57	20	25.974
ADAMTS6	0	genome.wustl.edu	37	5	64587290	64587290	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	64587290	64587290	G	A	SNP	ADAMTS6	ENST00000381055	human	ensembl	74_37	-1	known	missense	c.1378	p.R460C	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS6	HGNC	ENSG00000049192				46	0	0	47	13	21.6667
CD180	0	genome.wustl.edu	37	5	66478997	66478997	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	66478997	66478997	G	A	SNP	CD180	ENST00000256447	human	ensembl	74_37	-1	known	silent	c.1674	p.I558	0.062	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	CD180	HGNC	ENSG00000134061				38	0	0	46	8	14.8148
PDE8B	0	genome.wustl.edu	37	5	76700591	76700591	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	76700591	76700591	C	T	SNP	PDE8B	ENST00000264917	human	ensembl	74_37	+1	known	silent	c.1257	p.D419	0.999	NULL	pfam_PDEase_catalytic_dom,pfam_PDEase_PDE8,pfam_Sig_transdc_resp-reg_receiver,pfam_PAS_fold,pfam_PAS_4,pfam_PAS_fold_3,superfamily_PAS,superfamily_CheY-like_superfamily,smart_PAS,smart_HD/PDEase_dom,pfscan_PAS,prints_PDEase,tigrfam_PAS	-	no_errors	PDE8B	HGNC	ENSG00000113231				27	0	0	33	9	21.4286
WDR41	0	genome.wustl.edu	37	5	76747154	76747154	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	76747154	76747154	G	T	SNP	WDR41	ENST00000296679	human	ensembl	74_37	-1	known	missense	c.548	p.P183H	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR41	HGNC	ENSG00000164253				33	0	0	30	9	23.0769
C5orf49	0	genome.wustl.edu	37	5	7851031	7851031	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	7851031	7851031	C	T	SNP	C5orf49	ENST00000399810	human	ensembl	74_37	-1	known	missense	c.104	p.R35H	0.952	NULL	NULL	-	no_errors	C5orf49	HGNC	ENSG00000215217				20	0	0	13	8	38.0952
ACOT12	0	genome.wustl.edu	37	5	80689868	80689868	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	80689868	80689868	C	T	SNP	ACOT12	ENST00000307624	human	ensembl	74_37	-1	known	silent	c.66	p.A22	0.961	NULL	pfam_Thioestr_supf,pfam_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	ACOT12	HGNC	ENSG00000172497				10	0	0	10	3	23.0769
VCAN	0	genome.wustl.edu	37	5	82815289	82815289	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	82815289	82815289	A	G	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	silent	c.1164	p.L388	1.000	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				104	0	0	65	20	23.5294
LYSMD3	0	genome.wustl.edu	37	5	89820956	89820956	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	89820956	89820956	G	A	SNP	LYSMD3	ENST00000315948	human	ensembl	74_37	-1	known	nonsense	c.151	p.R51*	0.995	NULL	pfam_LysM_dom,smart_LysM_dom	-	no_errors	LYSMD3	HGNC	ENSG00000176018				47	0	0	31	7	18.4211
NR2F1	0	genome.wustl.edu	37	5	92924128	92924128	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	92924128	92924128	A	C	SNP	NR2F1	ENST00000327111	human	ensembl	74_37	+1	known	missense	c.969	p.K323N	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_COUP_TF,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	NR2F1	HGNC	ENSG00000175745				80	0	0	63	15	19.2308
RFESD	0	genome.wustl.edu	37	5	94989932	94989932	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	94989932	94989932	G	A	SNP	RFESD	ENST00000380005	human	ensembl	74_37	+1	known	missense	c.326	p.R109H	1.000	pfam_Rieske_2Fe-2S,superfamily_Rieske_2Fe-2S	pfam_Rieske_2Fe-2S,superfamily_Rieske_2Fe-2S	-	no_errors	RFESD	HGNC	ENSG00000175449				42	0	0	34	9	20.9302
ARMC2	0	genome.wustl.edu	37	6	109215690	109215690	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	109215690	109215690	C	T	SNP	ARMC2	ENST00000392644	human	ensembl	74_37	+1	known	missense	c.692	p.A231V	0.000	NULL	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ARMC2	HGNC	ENSG00000118690				81	0	0	71	16	18.3908
REV3L	0	genome.wustl.edu	37	6	111636522	111636522	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	111636522	111636522	G	A	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	missense	c.8414	p.A2805V	1.000	pfam_DNA-dir_DNA_pol_B_multi_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413				24	0	0	26	12	31.5789
ENSG00000237234	0	genome.wustl.edu	37	6	112476727	112476727	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	112476727	112476727	G	A	SNP	ENSG00000237234	ENST00000425503	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP1-142L7.5	Clone_based_vega_gene	ENSG00000237234				51	0	0	44	14	24.1379
SLC35F1	0	genome.wustl.edu	37	6	118228994	118228994	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	118228994	118228994	C	T	SNP	SLC35F1	ENST00000360388	human	ensembl	74_37	+1	known	silent	c.105	p.G35	0.939	NULL	pfam_SLC35_F1/F2/F6,pfam_DMT	-	no_errors	SLC35F1	HGNC	ENSG00000196376				39	0	0	23	13	36.1111
PRELID1P1	0	genome.wustl.edu	37	6	126965043	126965043	+	RNA	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	126965043	126965043	G	T	SNP	PRELID1P1	ENST00000567272	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PRELID1P1	HGNC	ENSG00000217325				35	0	0	50	13	20.6349
RNF146	0	genome.wustl.edu	37	6	127607921	127607921	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	127607921	127607921	G	A	SNP	RNF146	ENST00000368314	human	ensembl	74_37	+1	known	missense	c.163	p.V55I	1.000	smart_Znf_RING,pfscan_Znf_RING	pfam_WWE-dom,smart_Znf_RING,smart_WWE-dom_subgr,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	RNF146	HGNC	ENSG00000118518				96	0	0	95	32	25.1969
LAMA2	0	genome.wustl.edu	37	6	129465215	129465215	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	129465215	129465215	T	A	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	missense	c.809	p.V270D	1.000	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569				55	0	0	54	14	20.5882
LAMA2	0	genome.wustl.edu	37	6	129649528	129649528	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	129649528	129649528	C	A	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	missense	c.4282	p.L1428M	0.064	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569				92	0	0	72	38	34.5455
ENPP1	0	genome.wustl.edu	37	6	132204888	132204888	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	132204888	132204888	T	C	SNP	ENPP1	ENST00000360971	human	ensembl	74_37	+1	known	missense	c.2285	p.I762T	1.000	pfam_DNA/RNA_non-sp_Endonuclease,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENPP1	HGNC	ENSG00000197594				59	0	0	42	18	30
GFOD1	0	genome.wustl.edu	37	6	13365634	13365634	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	13365634	13365634	C	T	SNP	GFOD1	ENST00000379287	human	ensembl	74_37	-1	known	missense	c.514	p.G172S	1.000	pfam_OxRdtase_C	pfam_Oxidoreductase_N,pfam_OxRdtase_C	-	no_errors	GFOD1	HGNC	ENSG00000145990				39	0	0	40	12	23.0769
BCLAF1	0	genome.wustl.edu	37	6	136596789	136596789	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	136596789	136596789	G	T	SNP	BCLAF1	ENST00000531224	human	ensembl	74_37	-1	known	missense	c.1733	p.S578Y	1.000	NULL	NULL	-	no_errors	BCLAF1	HGNC	ENSG00000029363				127	0	0	137	13	8.66667
SLC35D3	0	genome.wustl.edu	37	6	137245364	137245364	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	137245364	137245364	G	T	SNP	SLC35D3	ENST00000331858	human	ensembl	74_37	+1	known	missense	c.781	p.V261L	1.000	pfam_Tpt_PEP_trans_dom	pfam_Tpt_PEP_trans_dom	-	no_errors	SLC35D3	HGNC	ENSG00000182747				64	0	0	51	12	19.0476
TNFAIP3	0	genome.wustl.edu	37	6	138201245	138201245	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	138201245	138201245	G	A	SNP	TNFAIP3	ENST00000237289	human	ensembl	74_37	+1	known	silent	c.1944	p.A648	0.715	NULL	pfam_Znf_A20,pfam_OTU,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	TNFAIP3	HGNC	ENSG00000118503				55	0	0	59	23	28.0488
HIVEP2	0	genome.wustl.edu	37	6	143092422	143092422	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	143092422	143092422	G	A	SNP	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	missense	c.3454	p.H1152Y	1.000	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818				100	0	0	79	24	23.301
HIVEP2	0	genome.wustl.edu	37	6	143093293	143093293	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	143093293	143093293	C	T	SNP	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	silent	c.2583	p.G861	0.920	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818				52	0	0	59	19	24.359
ENSG00000229036	0	genome.wustl.edu	37	6	143811925	143811925	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	143811925	143811925	G	A	SNP	ENSG00000229036	ENST00000589563	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	RP1-20N2.6	Clone_based_vega_gene	ENSG00000229036				25	0	0	19	6	24
PHACTR2	0	genome.wustl.edu	37	6	144086699	144086699	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	144086699	144086699	G	A	SNP	PHACTR2	ENST00000440869	human	ensembl	74_37	+1	known	silent	c.996	p.K332	0.041	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR2	HGNC	ENSG00000112419				70	0	0	66	17	20.4819
UTRN	0	genome.wustl.edu	37	6	144780421	144780421	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	144780421	144780421	G	A	SNP	UTRN	ENST00000367545	human	ensembl	74_37	+1	known	missense	c.2638	p.D880N	0.007	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818				61	0	0	53	24	31.1688
SHPRH	0	genome.wustl.edu	37	6	146256106	146256106	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	146256106	146256106	C	A	SNP	SHPRH	ENST00000367503	human	ensembl	74_37	-1	known	missense	c.2927	p.R976M	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Histone_H1/H5_H15,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,superfamily_WW_dom,smart_Helicase_ATP-bd,smart_Histone_H1/H5_H15,smart_Znf_PHD,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_C	-	no_errors	SHPRH	HGNC	ENSG00000146414				62	0	0	84	21	20
IYD	0	genome.wustl.edu	37	6	150690214	150690214	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	150690214	150690214	T	C	SNP	IYD	ENST00000229447	human	ensembl	74_37	+1	known	missense	c.47	p.V16A	0.625	NULL	pfam_Nitroreductase-like,superfamily_Nitroreductase-like	-	no_errors	IYD	HGNC	ENSG00000009765				254	0	0	184	66	26.4
AKAP12	0	genome.wustl.edu	37	6	151672182	151672182	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	151672182	151672182	G	A	SNP	AKAP12	ENST00000253332	human	ensembl	74_37	+1	known	missense	c.2656	p.E886K	0.057	NULL	pfam_Pkinase-A_anch_WSK-motif,pfam_RII_binding_1	-	no_errors	AKAP12	HGNC	ENSG00000131016				121	0	0	90	28	23.7288
ESR1	0	genome.wustl.edu	37	6	152201865	152201865	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	152201865	152201865	G	A	SNP	ESR1	ENST00000206249	human	ensembl	74_37	+1	known	missense	c.719	p.C240Y	1.000	pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Oestr_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Oestr_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESR1	HGNC	ENSG00000091831				45	0	0	35	16	31.3725
SYNE1	0	genome.wustl.edu	37	6	152826383	152826383	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	152826383	152826383	G	C	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.731	p.T244S	0.311	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				48	0	0	36	13	26.5306
ARID1B	0	genome.wustl.edu	37	6	157517409	157517409	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	157517409	157517409	C	T	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	nonsense	c.4093	p.Q1365*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618				154	1	0.645161	91	33	26.6129
TULP4	0	genome.wustl.edu	37	6	158914686	158914686	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	158914686	158914686	C	T	SNP	TULP4	ENST00000367097	human	ensembl	74_37	+1	known	silent	c.1713	p.R571	1.000	superfamily_Tubby_C-like	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338				119	0	0	83	23	21.6981
MAP3K4	0	genome.wustl.edu	37	6	161529828	161529828	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	161529828	161529828	G	T	SNP	MAP3K4	ENST00000392142	human	ensembl	74_37	+1	known	missense	c.4173	p.L1391F	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511				124	0	0	113	26	18.705
ATXN1	0	genome.wustl.edu	37	6	16327407	16327407	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	16327407	16327407	G	A	SNP	ATXN1	ENST00000244769	human	ensembl	74_37	-1	known	missense	c.1135	p.R379W	0.998	NULL	pfam_Ataxin-1_HBP1,pfam_Capicua_tscrpt_rep_mod,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1	HGNC	ENSG00000124788				233	0	0	160	54	25.2336
ATXN1	0	genome.wustl.edu	37	6	16327474	16327474	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	16327474	16327474	G	A	SNP	ATXN1	ENST00000244769	human	ensembl	74_37	-1	known	silent	c.1068	p.Y356	0.900	NULL	pfam_Ataxin-1_HBP1,pfam_Capicua_tscrpt_rep_mod,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1	HGNC	ENSG00000124788				179	0	0	109	39	26.3514
PDE10A	0	genome.wustl.edu	37	6	165756927	165756927	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	165756927	165756927	C	T	SNP	PDE10A	ENST00000539869	human	ensembl	74_37	-1	known	missense	c.2050	p.V684I	0.976	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE10A	HGNC	ENSG00000112541				47	0	0	53	26	32.9114
RPS6KA2	0	genome.wustl.edu	37	6	166862227	166862227	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	166862227	166862227	G	A	SNP	RPS6KA2	ENST00000510118	human	ensembl	74_37	-1	known	silent	c.1392	p.T464	0.025	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA2	HGNC	ENSG00000071242				25	0	0	18	3	14.2857
TBP	0	genome.wustl.edu	37	6	170871058	170871058	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	170871058	170871058	G	A	SNP	TBP	ENST00000230354	human	ensembl	74_37	+1	known	silent	c.234	p.Q78	0.998	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592				72	0	0	69	7	9.21053
HIST1H2BC	0	genome.wustl.edu	37	6	26123917	26123917	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	26123917	26123917	C	T	SNP	HIST1H2BC	ENST00000314332	human	ensembl	74_37	-1	known	silent	c.216	p.E72	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BC	HGNC	ENSG00000180596				224	0	0	148	45	23.3161
HIST1H2BD	0	genome.wustl.edu	37	6	26158762	26158762	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	26158762	26158762	A	G	SNP	HIST1H2BD	ENST00000289316	human	ensembl	74_37	+1	known	missense	c.365	p.Y122C	1.000	superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BD	HGNC	ENSG00000158373				115	0	0	96	33	25.5814
HIST1H2BM	0	genome.wustl.edu	37	6	27783081	27783081	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	27783081	27783081	G	A	SNP	HIST1H2BM	ENST00000359465	human	ensembl	74_37	+1	known	missense	c.260	p.R87H	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BM	HGNC	ENSG00000196374				126	0	0	99	32	24.4275
HIST1H2AM	0	genome.wustl.edu	37	6	27860683	27860683	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	27860683	27860683	C	G	SNP	HIST1H2AM	ENST00000359611	human	ensembl	74_37	-1	known	missense	c.245	p.R82P	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AM	HGNC	ENSG00000233224				221	0	0	180	59	24.6862
ZKSCAN3	0	genome.wustl.edu	37	6	28327511	28327511	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	28327511	28327511	C	T	SNP	ZKSCAN3	ENST00000252211	human	ensembl	74_37	+1	known	nonsense	c.148	p.R50*	0.803	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN3	HGNC	ENSG00000189298				164	0	0	148	36	19.5652
GABBR1	0	genome.wustl.edu	37	6	29599309	29599309	+	Silent	SNP	C	C	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	29599309	29599309	C	G	SNP	GABBR1	ENST00000377034	human	ensembl	74_37	-1	known	silent	c.153	p.V51	0.995	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Sushi_SCR_CCP,superfamily_Peripla_BP_I,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,pfscan_Sushi_SCR_CCP,pfscan_GPCR_3_C	-	no_errors	GABBR1	HGNC	ENSG00000204681				184	0	0	128	47	26.8571
HLA-G	0	genome.wustl.edu	37	6	29795987	29795987	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	29795987	29795987	G	T	SNP	HLA-G	ENST00000376828	human	ensembl	74_37	+1	known	missense	c.252	p.E84D	0.993	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-G	HGNC	ENSG00000204632				74	0	0	47	15	24.1935
HSPA1L	0	genome.wustl.edu	37	6	31779712	31779712	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	31779712	31779712	A	G	SNP	HSPA1L	ENST00000375654	human	ensembl	74_37	-1	known	missense	c.38	p.L13P	1.000	pfam_Hsp_70_fam,prints_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA1L	HGNC	ENSG00000204390				69	0	0	67	16	19.2771
EHMT2	0	genome.wustl.edu	37	6	31850545	31850545	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	31850545	31850545	T	C	SNP	EHMT2	ENST00000395728	human	ensembl	74_37	-1	known	missense	c.3299	p.Y1100C	1.000	smart_SET_dom,pfscan_SET_dom	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT2	HGNC	ENSG00000204371				22	0	0	25	4	13.7931
TNXB	0	genome.wustl.edu	37	6	32064801	32064801	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	32064801	32064801	T	C	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.829	p.M277V	0.000	NULL	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				33	0	0	46	12	20.6897
TNXB	0	genome.wustl.edu	37	6	32065916	32065916	+	Silent	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	32065916	32065916	T	G	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	silent	c.60	p.T20	0.780	NULL	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				56	0	0	32	9	21.9512
COL11A2	0	genome.wustl.edu	37	6	33132047	33132047	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	33132047	33132047	G	A	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	silent	c.5067	p.C1689	1.000	pfam_Fib_collagen_C,smart_Fib_collagen_C	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248				30	0	0	19	7	26.9231
ZBTB22	0	genome.wustl.edu	37	6	33283797	33283797	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	33283797	33283797	G	A	SNP	ZBTB22	ENST00000418724	human	ensembl	74_37	-1	known	silent	c.897	p.Y299	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB22	HGNC	ENSG00000236104				103	0	0	102	18	15
MAPK14	0	genome.wustl.edu	37	6	36063811	36063811	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	36063811	36063811	G	A	SNP	MAPK14	ENST00000229794	human	ensembl	74_37	+1	known	missense	c.730	p.A244T	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_p38	-	no_errors	MAPK14	HGNC	ENSG00000112062				38	0	0	36	14	28
C6orf89	0	genome.wustl.edu	37	6	36882373	36882373	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	36882373	36882373	G	A	SNP	C6orf89	ENST00000355190	human	ensembl	74_37	+1	known	missense	c.620	p.C207Y	0.998	NULL	NULL	-	no_errors	C6orf89	HGNC	ENSG00000198663				188	0	0	157	48	23.4146
MDGA1	0	genome.wustl.edu	37	6	37626122	37626122	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	37626122	37626122	C	T	SNP	MDGA1	ENST00000297153	human	ensembl	74_37	-1	known	missense	c.281	p.R94H	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA1	HGNC	ENSG00000112139				86	0	0	51	23	31.0811
BTBD9	0	genome.wustl.edu	37	6	38142774	38142774	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	38142774	38142774	C	T	SNP	BTBD9	ENST00000403056	human	ensembl	74_37	-1	known	missense	c.1826	p.R609Q	0.995	NULL	pfam_BTB_POZ,pfam_BACK,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_BTB/POZ_fold,superfamily_Galactose-bd-like,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD9	HGNC	ENSG00000183826				211	0	0	175	47	21.1712
DNAH8	0	genome.wustl.edu	37	6	38941550	38941550	+	Silent	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	38941550	38941550	T	G	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	silent	c.11988	p.T3996	0.825	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				35	0	0	36	13	26.5306
LRFN2	0	genome.wustl.edu	37	6	40359880	40359880	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	40359880	40359880	G	A	SNP	LRFN2	ENST00000338305	human	ensembl	74_37	-1	known	silent	c.2172	p.F724	0.867	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN2	HGNC	ENSG00000156564				34	0	0	17	8	32
CUL9	0	genome.wustl.edu	37	6	43153240	43153240	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	43153240	43153240	C	T	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	silent	c.642	p.I214	0.998	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659				64	0	0	52	10	16.129
CAPN11	0	genome.wustl.edu	37	6	44148736	44148736	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	44148736	44148736	T	C	SNP	CAPN11	ENST00000398776	human	ensembl	74_37	+1	known	splice_site	c.1869+2	e18+2	1.000	-	-	-	no_errors	CAPN11	HGNC	ENSG00000137225				216	0	0	156	54	25.7143
RUNX2	0	genome.wustl.edu	37	6	45390460	45390460	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	45390460	45390460	G	A	SNP	RUNX2	ENST00000352853	human	ensembl	74_37	+1	known	silent	c.393	p.Q131	1.000	NULL	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX2	HGNC	ENSG00000124813				46	0	0	40	18	31.0345
RCAN2	0	genome.wustl.edu	37	6	46216602	46216602	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	46216602	46216602	T	C	SNP	RCAN2	ENST00000306764	human	ensembl	74_37	-1	known	missense	c.257	p.D86G	1.000	pfam_Calcipressin	pfam_Calcipressin	-	no_errors	RCAN2	HGNC	ENSG00000172348				34	0	0	27	7	20.5882
TDRD6	0	genome.wustl.edu	37	6	46656549	46656549	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	46656549	46656549	G	A	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	silent	c.684	p.S228	0.003	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113				47	0	0	37	15	28.8462
TDRD6	0	genome.wustl.edu	37	6	46659238	46659238	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	46659238	46659238	A	C	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	missense	c.3373	p.K1125Q	1.000	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113				93	0	0	75	27	26.4706
TFAP2D	0	genome.wustl.edu	37	6	50683050	50683050	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	50683050	50683050	C	T	SNP	TFAP2D	ENST00000008391	human	ensembl	74_37	+1	known	silent	c.261	p.P87	1.000	NULL	pfam_TF_AP2_C,prints_TF_AP2_C	-	no_errors	TFAP2D	HGNC	ENSG00000008197				117	0	0	90	32	26.2295
EFHC1	0	genome.wustl.edu	37	6	52344444	52344444	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	52344444	52344444	G	A	SNP	EFHC1	ENST00000371068	human	ensembl	74_37	+1	known	missense	c.1499	p.G500D	1.000	smart_Uncharacterised_DM10	pfam_DUF1126,smart_Uncharacterised_DM10,pfscan_EF_hand_dom	-	no_errors	EFHC1	HGNC	ENSG00000096093				82	0	0	70	29	29.2929
GSTA1	0	genome.wustl.edu	37	6	52657737	52657737	+	Silent	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	52657737	52657737	G	T	SNP	GSTA1	ENST00000334575	human	ensembl	74_37	-1	known	silent	c.463	p.R155	0.998	pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like	pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_GST_alpha	-	no_errors	GSTA1	HGNC	ENSG00000243955				187	0	0	117	45	27.7778
PRIM2	0	genome.wustl.edu	37	6	57246923	57246923	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	57246923	57246923	T	C	SNP	PRIM2	ENST00000607273	human	ensembl	74_37	+1	known	missense	c.650	p.I217T	1.000	pfam_DNA_primase_lsu_euk/arc	pfam_DNA_primase_lsu_euk/arc	-	no_errors	PRIM2	HGNC	ENSG00000146143				46	0	0	38	7	15.5556
FAM135A	0	genome.wustl.edu	37	6	71235966	71235966	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	71235966	71235966	G	A	SNP	FAM135A	ENST00000418814	human	ensembl	74_37	+1	known	missense	c.3179	p.S1060N	0.199	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like,pfam_LACT/PDAT_acylTrfase	-	no_errors	FAM135A	HGNC	ENSG00000082269				34	0	0	24	13	35.1351
RIMS1	0	genome.wustl.edu	37	6	72892717	72892717	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	72892717	72892717	A	G	SNP	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	missense	c.1543	p.K515E	1.000	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841				12	0	0	7	8	53.3333
KCNQ5	0	genome.wustl.edu	37	6	73902287	73902287	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	73902287	73902287	G	A	SNP	KCNQ5	ENST00000402622	human	ensembl	74_37	+1	known	splice_site	c.1740-1	e13-1	1.000	-	-	-	no_errors	KCNQ5	HGNC	ENSG00000185760				46	0	0	37	10	21.2766
FILIP1	0	genome.wustl.edu	37	6	76022914	76022914	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	76022914	76022914	G	A	SNP	FILIP1	ENST00000237172	human	ensembl	74_37	-1	known	silent	c.2634	p.N878	0.038	NULL	pfam_Cortactin-binding_p2_N,prints_Tropomyosin	-	no_errors	FILIP1	HGNC	ENSG00000118407				100	0	0	78	31	28.4404
BMP6	0	genome.wustl.edu	37	6	7727782	7727782	+	Silent	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	7727782	7727782	C	A	SNP	BMP6	ENST00000283147	human	ensembl	74_37	+1	known	silent	c.594	p.S198	1.000	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	BMP6	HGNC	ENSG00000153162				22	0	0	18	9	33.3333
IRAK1BP1	0	genome.wustl.edu	37	6	79607974	79607974	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	79607974	79607974	G	A	SNP	IRAK1BP1	ENST00000369940	human	ensembl	74_37	+1	known	missense	c.706	p.A236T	1.000	pfam_DUF541	pfam_DUF541	-	no_errors	IRAK1BP1	HGNC	ENSG00000146243				33	0	0	31	4	11.4286
LCA5	0	genome.wustl.edu	37	6	80196804	80196804	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	80196804	80196804	G	A	SNP	LCA5	ENST00000369846	human	ensembl	74_37	-1	known	nonsense	c.2011	p.R671*	0.998	NULL	NULL	-	no_errors	LCA5	HGNC	ENSG00000135338				75	0	0	65	29	30.8511
LCA5	0	genome.wustl.edu	37	6	80223190	80223190	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	80223190	80223190	G	A	SNP	LCA5	ENST00000369846	human	ensembl	74_37	-1	known	silent	c.459	p.A153	0.778	NULL	NULL	-	no_errors	LCA5	HGNC	ENSG00000135338				42	0	0	42	10	19.2308
CNR1	0	genome.wustl.edu	37	6	88854552	88854552	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	88854552	88854552	G	A	SNP	CNR1	ENST00000369499	human	ensembl	74_37	-1	known	missense	c.442	p.R148C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Cnbnoid_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Canbinoid_rcpt_1,prints_Cnbnoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CNR1	HGNC	ENSG00000118432				36	0	0	35	8	18.6047
UFL1	0	genome.wustl.edu	37	6	96997630	96997630	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	96997630	96997630	G	A	SNP	UFL1	ENST00000369278	human	ensembl	74_37	+1	known	silent	c.1773	p.S591	0.997	NULL	pfam_E3_UFM1_ligase_1	-	no_errors	UFL1	HGNC	ENSG00000014123				54	0	0	60	21	25.9259
COQ3	0	genome.wustl.edu	37	6	99819461	99819461	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	99819461	99819461	G	A	SNP	COQ3	ENST00000254759	human	ensembl	74_37	-1	known	silent	c.732	p.P244	0.049	pfam_Methyltransf_11,pfam_Methyltransf_12,pfam_Mycolic_cyclopropane_synthase,pfam_UbiE/COQ5_MeTrFase,pfam_Small_mtfrase_dom,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_SAM-MeTfrase_NodS-related,tigrfam_UbiG_MeTrfase	pfam_Methyltransf_11,pfam_Methyltransf_12,pfam_Mycolic_cyclopropane_synthase,pfam_UbiE/COQ5_MeTrFase,pfam_Small_mtfrase_dom,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_SAM-MeTfrase_NodS-related,tigrfam_UbiG_MeTrfase	-	no_errors	COQ3	HGNC	ENSG00000132423				24	0	0	27	10	27.027
PNISR	0	genome.wustl.edu	37	6	99857155	99857155	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	99857155	99857155	T	C	SNP	PNISR	ENST00000369239	human	ensembl	74_37	-1	known	silent	c.567	p.P189	1.000	NULL	NULL	-	no_errors	PNISR	HGNC	ENSG00000132424				58	0	0	39	12	23.5294
ZAN	0	genome.wustl.edu	37	7	100334562	100334562	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	100334562	100334562	G	T	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.384	p.W128C	0.987	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839				11	0	0	4	5	55.5556
MUC17	0	genome.wustl.edu	37	7	100676852	100676852	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	100676852	100676852	G	A	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.2155	p.V719M	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				563	1	0.177305	389	165	29.7834
MUC17	0	genome.wustl.edu	37	7	100684616	100684616	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	100684616	100684616	G	A	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.9919	p.D3307N	0.005	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				599	0	0	413	138	25.0454
RELN	0	genome.wustl.edu	37	7	103113350	103113350	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	103113350	103113350	C	T	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.10292	p.R3431H	1.000	NULL	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				37	0	0	35	8	18.6047
LAMB4	0	genome.wustl.edu	37	7	107669592	107669592	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	107669592	107669592	C	T	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	missense	c.5042	p.S1681N	0.114	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128				30	0	0	25	9	26.4706
LAMB4	0	genome.wustl.edu	37	7	107671353	107671353	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	107671353	107671353	T	C	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	silent	c.4890	p.G1630	0.000	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128				99	0	0	61	27	30.6818
THSD7A	0	genome.wustl.edu	37	7	11676473	11676473	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	11676473	11676473	G	A	SNP	THSD7A	ENST00000423059	human	ensembl	74_37	-1	known	silent	c.306	p.A102	0.055	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108				93	0	0	73	29	28.4314
WNT16	0	genome.wustl.edu	37	7	120979382	120979382	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	120979382	120979382	G	A	SNP	WNT16	ENST00000222462	human	ensembl	74_37	+1	known	missense	c.1081	p.V361I	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt16,prints_Wnt	-	no_errors	WNT16	HGNC	ENSG00000002745				49	0	0	33	14	29.7872
AASS	0	genome.wustl.edu	37	7	121716488	121716488	+	RNA	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	121716488	121716488	A	G	SNP	AASS	ENST00000473553	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AASS	HGNC	ENSG00000008311				26	0	0	31	10	24.3902
LMOD2	0	genome.wustl.edu	37	7	123302536	123302536	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	123302536	123302536	C	T	SNP	LMOD2	ENST00000458573	human	ensembl	74_37	+1	known	missense	c.896	p.T299M	0.997	NULL	pfam_Tropomodulin,pfscan_WH2_dom	-	no_errors	LMOD2	HGNC	ENSG00000170807				145	0	0	97	33	25.3846
SND1	0	genome.wustl.edu	37	7	127342555	127342555	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	127342555	127342555	T	C	SNP	SND1	ENST00000354725	human	ensembl	74_37	+1	known	missense	c.656	p.V219A	0.999	superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Staphylococal_nuclease_OB-fold	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157				79	0	0	56	21	27.2727
LRRC4	0	genome.wustl.edu	37	7	127669623	127669623	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	127669623	127669623	G	A	SNP	LRRC4	ENST00000249363	human	ensembl	74_37	-1	known	silent	c.1071	p.D357	1.000	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4	HGNC	ENSG00000128594				59	0	0	35	13	27.0833
TNPO3	0	genome.wustl.edu	37	7	128630077	128630077	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	128630077	128630077	T	C	SNP	TNPO3	ENST00000393245	human	ensembl	74_37	-1	known	missense	c.1538	p.Y513C	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	-	no_errors	TNPO3	HGNC	ENSG00000064419				86	0	0	77	29	27.3585
NRF1	0	genome.wustl.edu	37	7	129350308	129350308	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	129350308	129350308	C	T	SNP	NRF1	ENST00000393231	human	ensembl	74_37	+1	known	missense	c.860	p.T287M	1.000	NULL	pfam_Nrf1_NLS/DNA-bd_dimer,pfam_Nrf1_activation-bd	-	no_errors	NRF1	HGNC	ENSG00000106459				95	0	0	90	23	20.354
CPA1	0	genome.wustl.edu	37	7	130024461	130024461	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	130024461	130024461	T	C	SNP	CPA1	ENST00000011292	human	ensembl	74_37	+1	known	missense	c.781	p.F261L	0.997	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA1	HGNC	ENSG00000091704				73	0	0	70	18	20.4545
KLF14	0	genome.wustl.edu	37	7	130418141	130418141	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	130418141	130418141	G	A	SNP	KLF14	ENST00000310992	human	ensembl	74_37	-1	known	silent	c.720	p.D240	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF14	HGNC	ENSG00000174595				23	0	0	24	4	14.2857
PLXNA4	0	genome.wustl.edu	37	7	131817885	131817885	+	Silent	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	131817885	131817885	G	T	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	silent	c.5512	p.R1838	0.994	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866				89	0	0	75	20	21.0526
PLXNA4	0	genome.wustl.edu	37	7	131859624	131859624	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	131859624	131859624	G	A	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	silent	c.3930	p.A1310	0.618	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866				158	0	0	108	31	22.3022
CNOT4	0	genome.wustl.edu	37	7	135079025	135079025	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	135079025	135079025	G	A	SNP	CNOT4	ENST00000541284	human	ensembl	74_37	-1	known	silent	c.1272	p.S424	0.687	NULL	pfam_RRM_dom,smart_RRM_dom_euk,pfscan_Znf_RING,pfscan_RRM_dom	-	no_errors	CNOT4	HGNC	ENSG00000080802				90	0	0	100	25	20
ZC3HAV1	0	genome.wustl.edu	37	7	138764823	138764823	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	138764823	138764823	C	T	SNP	ZC3HAV1	ENST00000242351	human	ensembl	74_37	-1	known	silent	c.864	p.A288	0.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	ZC3HAV1	HGNC	ENSG00000105939				144	0	0	118	35	22.8758
LUC7L2	0	genome.wustl.edu	37	7	139107037	139107037	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	139107037	139107037	G	A	SNP	LUC7L2	ENST00000541515	human	ensembl	74_37	+1	known	missense	c.1328	p.R443K	1.000	NULL	pfam_Luc7-rel	-	no_errors	LUC7L2	HGNC	ENSG00000269955				83	0	0	85	22	20.5607
KLRG2	0	genome.wustl.edu	37	7	139168278	139168278	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	139168278	139168278	C	A	SNP	KLRG2	ENST00000340940	human	ensembl	74_37	-1	known	missense	c.111	p.K37N	0.025	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRG2	HGNC	ENSG00000188883				49	0	0	28	10	26.3158
PRSS37	0	genome.wustl.edu	37	7	141539138	141539138	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	141539138	141539138	G	A	SNP	PRSS37	ENST00000350549	human	ensembl	74_37	-1	known	missense	c.176	p.P59L	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS37	HGNC	ENSG00000165076				30	0	0	28	9	24.3243
MGAM	0	genome.wustl.edu	37	7	141750608	141750608	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	141750608	141750608	C	T	SNP	MGAM	ENST00000549489	human	ensembl	74_37	+1	known	missense	c.2749	p.H917Y	0.063	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335				54	0	0	42	15	26.3158
GSTK1	0	genome.wustl.edu	37	7	142960695	142960695	+	RNA	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	142960695	142960695	T	C	SNP	GSTK1	ENST00000494735	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GSTK1	HGNC	ENSG00000197448				78	0	0	70	20	22.2222
FAM131B	0	genome.wustl.edu	37	7	143054474	143054474	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	143054474	143054474	G	A	SNP	FAM131B	ENST00000443739	human	ensembl	74_37	-1	known	missense	c.509	p.A170V	1.000	NULL	NULL	-	no_errors	FAM131B	HGNC	ENSG00000159784				108	0	0	97	25	20.4918
DGKB	0	genome.wustl.edu	37	7	14378324	14378324	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	14378324	14378324	T	C	SNP	DGKB	ENST00000258767	human	ensembl	74_37	-1	known	silent	c.1941	p.V647	0.405	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKB	HGNC	ENSG00000136267				30	0	0	30	12	28.5714
ZNF777	0	genome.wustl.edu	37	7	149129440	149129440	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	149129440	149129440	G	A	SNP	ZNF777	ENST00000247930	human	ensembl	74_37	-1	known	silent	c.1923	p.C641	0.994	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453				258	1	0.3861	226	79	25.9016
SSPO	0	genome.wustl.edu	37	7	149490507	149490507	+	RNA	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	149490507	149490507	A	G	SNP	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.102	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				30	0	0	14	4	22.2222
GALNTL5	0	genome.wustl.edu	37	7	151680068	151680068	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	151680068	151680068	C	T	SNP	GALNTL5	ENST00000468278	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.848	-	-	-	no_errors	GALNTL5	HGNC	ENSG00000106648				70	0	0	77	25	24.5098
NOM1	0	genome.wustl.edu	37	7	156762298	156762298	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	156762298	156762298	C	T	SNP	NOM1	ENST00000275820	human	ensembl	74_37	+1	known	silent	c.2484	p.N828	0.001	NULL	pfam_Initiation_fac_eIF4g_MI,pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI	-	no_errors	NOM1	HGNC	ENSG00000146909				196	0	0	148	29	16.3842
AHR	0	genome.wustl.edu	37	7	17375352	17375352	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	17375352	17375352	C	T	SNP	AHR	ENST00000242057	human	ensembl	74_37	+1	known	missense	c.1102	p.R368C	1.000	pfam_PAS_fold_3,superfamily_PAS,smart_PAC	pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	AHR	HGNC	ENSG00000106546				17	0	0	18	6	25
FERD3L	0	genome.wustl.edu	37	7	19184667	19184667	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	19184667	19184667	T	C	SNP	FERD3L	ENST00000275461	human	ensembl	74_37	-1	known	missense	c.319	p.N107D	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	FERD3L	HGNC	ENSG00000146618				52	0	0	46	13	22.0339
NUDT1	0	genome.wustl.edu	37	7	2284269	2284269	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	2284269	2284269	G	A	SNP	NUDT1	ENST00000343985	human	ensembl	74_37	+1	known	silent	c.129	p.L43	1.000	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,prints_OxG-triPHTase	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,prints_OxG-triPHTase,prints_Nudix_hydrolase	-	no_errors	NUDT1	HGNC	ENSG00000106268				38	0	0	37	14	27.451
CHST12	0	genome.wustl.edu	37	7	2472759	2472759	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	2472759	2472759	G	A	SNP	CHST12	ENST00000258711	human	ensembl	74_37	+1	known	missense	c.485	p.R162Q	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	CHST12	HGNC	ENSG00000136213				143	1	0.694444	121	35	22.4359
SKAP2	0	genome.wustl.edu	37	7	26904115	26904115	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	26904115	26904115	C	T	SNP	SKAP2	ENST00000487720	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.943	-	-	-	no_errors	SKAP2	HGNC	ENSG00000005020				25	0	0	17	3	15
HOXA2	0	genome.wustl.edu	37	7	27141905	27141905	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	27141905	27141905	C	T	SNP	HOXA2	ENST00000222718	human	ensembl	74_37	-1	known	missense	c.215	p.R72H	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXA2	HGNC	ENSG00000105996				21	0	0	14	11	44
AMZ1	0	genome.wustl.edu	37	7	2752320	2752320	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	2752320	2752320	C	T	SNP	AMZ1	ENST00000312371	human	ensembl	74_37	+1	known	silent	c.1305	p.D435	0.867	NULL	pfam_Pept_M54_archaemetzincn	-	no_errors	AMZ1	HGNC	ENSG00000174945				62	0	0	27	10	27.027
SCRN1	0	genome.wustl.edu	37	7	29966126	29966126	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	29966126	29966126	C	T	SNP	SCRN1	ENST00000434476	human	ensembl	74_37	-1	known	missense	c.1088	p.R363H	1.000	NULL	pfam_Peptidase_C69	-	no_errors	SCRN1	HGNC	ENSG00000136193				148	0	0	123	34	21.6561
BMPER	0	genome.wustl.edu	37	7	34118763	34118763	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	34118763	34118763	T	C	SNP	BMPER	ENST00000297161	human	ensembl	74_37	+1	known	missense	c.1373	p.L458P	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_VWF_C,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_C,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,pfscan_VWF_C	-	no_errors	BMPER	HGNC	ENSG00000164619				129	0	0	88	19	17.757
DPY19L2P1	0	genome.wustl.edu	37	7	35131480	35131480	+	RNA	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	35131480	35131480	A	T	SNP	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212				36	0	0	66	4	5.71429
DPY19L2P1	0	genome.wustl.edu	37	7	35131520	35131520	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	35131520	35131520	C	T	SNP	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212				40	0	0	70	7	9.09091
DPY19L2P1	0	genome.wustl.edu	37	7	35131548	35131548	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	35131548	35131548	G	A	SNP	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.985	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212				36	0	0	57	9	13.6364
CDK13	0	genome.wustl.edu	37	7	40132557	40132557	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	40132557	40132557	G	A	SNP	CDK13	ENST00000181839	human	ensembl	74_37	+1	known	missense	c.3409	p.A1137T	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK13	HGNC	ENSG00000065883				138	0	0	110	33	23.0769
HECW1	0	genome.wustl.edu	37	7	43508655	43508655	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	43508655	43508655	G	A	SNP	HECW1	ENST00000395891	human	ensembl	74_37	+1	known	missense	c.3050	p.R1017Q	0.999	superfamily_WW_dom	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW1	HGNC	ENSG00000002746				105	0	0	86	21	19.6262
POLD2	0	genome.wustl.edu	37	7	44155855	44155855	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	44155855	44155855	T	C	SNP	POLD2	ENST00000406581	human	ensembl	74_37	-1	known	missense	c.878	p.D293G	1.000	pfam_DNA_pol_alpha/epsilon_bsu	pfam_DNA_pol_alpha/epsilon_bsu	-	no_errors	POLD2	HGNC	ENSG00000106628				72	0	0	61	22	26.506
ZMIZ2	0	genome.wustl.edu	37	7	44804082	44804082	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	44804082	44804082	G	A	SNP	ZMIZ2	ENST00000309315	human	ensembl	74_37	+1	known	missense	c.1925	p.C642Y	1.000	pfam_Znf_MIZ,pfscan_Znf_MIZ	pfam_Znf_MIZ,pfscan_Znf_MIZ	-	no_errors	ZMIZ2	HGNC	ENSG00000122515				56	0	0	33	8	19.5122
PAPOLB	0	genome.wustl.edu	37	7	4899601	4899601	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	4899601	4899601	A	G	SNP	PAPOLB	ENST00000404991	human	ensembl	74_37	-1	known	missense	c.1838	p.V613A	0.971	pirsf_PolyA_polymerase	pfam_PolA_pol_cen_dom,pfam_PolA_pol_RNA-bd_dom,pfam_Nucleotidyltransferase,superfamily_NuclTrfase_I_C,pirsf_PolyA_polymerase	-	no_errors	PAPOLB	HGNC	ENSG00000218823				43	0	0	36	8	18.1818
FBXL18	0	genome.wustl.edu	37	7	5530899	5530899	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	5530899	5530899	C	T	SNP	FBXL18	ENST00000453700	human	ensembl	74_37	-1	known	missense	c.1963	p.A655T	0.288	NULL	pfam_F-box_dom,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXL18	HGNC	ENSG00000155034				20	0	0	19	3	13.6364
ZNF716	0	genome.wustl.edu	37	7	57529541	57529541	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	57529541	57529541	T	C	SNP	ZNF716	ENST00000420713	human	ensembl	74_37	+1	known	silent	c.1374	p.H458	0.998	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF716	HGNC	ENSG00000182111				16	0	0	17	11	39.2857
TMEM248	0	genome.wustl.edu	37	7	66415976	66415976	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	66415976	66415976	G	A	SNP	TMEM248	ENST00000341567	human	ensembl	74_37	+1	known	missense	c.634	p.A212T	1.000	NULL	NULL	-	no_errors	TMEM248	HGNC	ENSG00000106609				183	0	0	131	37	22.0238
CLIP2	0	genome.wustl.edu	37	7	73753283	73753283	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	73753283	73753283	C	T	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	+1	known	silent	c.627	p.S209	0.983	superfamily_CAP-Gly_domain	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665				84	0	0	57	21	26.9231
NCF1	0	genome.wustl.edu	37	7	74191684	74191684	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	74191684	74191684	C	T	SNP	NCF1	ENST00000289473	human	ensembl	74_37	+1	known	silent	c.144	p.Y48	0.996	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox,prints_P47PHOX	pfam_SH3_domain,pfam_NADPH_oxidase_p47Phox_C,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain,prints_P47PHOX	-	no_errors	NCF1	HGNC	ENSG00000158517				36	0	0	33	12	26.6667
SRRM3	0	genome.wustl.edu	37	7	75896577	75896577	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	75896577	75896577	C	T	SNP	SRRM3	ENST00000388802	human	ensembl	74_37	+1	known	silent	c.832	p.L278	1.000	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM3	HGNC	ENSG00000177679				19	0	0	13	3	18.75
PCLO	0	genome.wustl.edu	37	7	82579273	82579273	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	82579273	82579273	T	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.10631	p.D3544G	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				47	0	0	45	14	23.7288
AKAP9	0	genome.wustl.edu	37	7	91632321	91632321	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	91632321	91632321	T	C	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	silent	c.3126	p.G1042	0.001	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914				51	0	0	46	13	22.0339
AKAP9	0	genome.wustl.edu	37	7	91737940	91737940	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	91737940	91737940	A	G	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	missense	c.11691	p.I3897M	0.978	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914				34	0	0	41	9	18
ADAP1	0	genome.wustl.edu	37	7	943803	943803	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	943803	943803	T	C	SNP	ADAP1	ENST00000539900	human	ensembl	74_37	-1	known	missense	c.641	p.N214S	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_Pleckstrin_homology,smart_ArfGAP,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ADAP1	HGNC	ENSG00000105963				91	0	0	61	27	30.6818
VPS13B	0	genome.wustl.edu	37	8	100733153	100733153	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	100733153	100733153	G	T	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	missense	c.7003	p.G2335W	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				56	0	0	61	17	21.7949
NCALD	0	genome.wustl.edu	37	8	102701588	102701588	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	102701588	102701588	C	T	SNP	NCALD	ENST00000311028	human	ensembl	74_37	-1	known	silent	c.531	p.P177	0.105	pfscan_EF_hand_dom,prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	NCALD	HGNC	ENSG00000104490				21	0	0	25	5	16.6667
SOX7	0	genome.wustl.edu	37	8	10584134	10584134	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	10584134	10584134	T	C	SNP	SOX7	ENST00000553390	human	ensembl	74_37	-1	known	missense	c.437	p.Y146C	0.981	pfam_HMG_box_dom,superfamily_HMG_box_dom,pfscan_HMG_box_dom	pfam_Sox_C_TAD,pfam_G_patch_dom,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_HMG_box_dom	-	no_errors	SOX7	HGNC	ENSG00000171056				88	0	0	69	11	13.75
PKHD1L1	0	genome.wustl.edu	37	8	110478937	110478937	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	110478937	110478937	G	A	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	silent	c.8544	p.A2848	0.027	NULL	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				21	0	0	20	6	23.0769
SYBU	0	genome.wustl.edu	37	8	110587966	110587966	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	110587966	110587966	T	C	SNP	SYBU	ENST00000276646	human	ensembl	74_37	-1	known	silent	c.1161	p.E387	0.927	NULL	NULL	-	no_errors	SYBU	HGNC	ENSG00000147642				55	0	0	47	15	24.1935
CSMD3	0	genome.wustl.edu	37	8	113314144	113314144	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	113314144	113314144	G	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.8318	p.T2773N	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				67	0	0	67	16	19.2771
FDFT1	0	genome.wustl.edu	37	8	11683576	11683576	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	11683576	11683576	G	A	SNP	FDFT1	ENST00000220584	human	ensembl	74_37	+1	known	missense	c.554	p.R185H	0.224	pfam_Squ/phyt_synthse,superfamily_Terpenoid_synth,tigrfam_Squal_synth	pfam_Squ/phyt_synthse,superfamily_Terpenoid_synth,tigrfam_Squal_synth	-	no_errors	FDFT1	HGNC	ENSG00000079459				101	0	0	73	15	17.0455
RAD21	0	genome.wustl.edu	37	8	117868981	117868981	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	117868981	117868981	C	T	SNP	RAD21	ENST00000297338	human	ensembl	74_37	-1	known	missense	c.718	p.G240S	1.000	NULL	pfam_Rad21_Rec8_N,pfam_Rad21/Rec8_C_eu,pfam_ScpA	-	no_errors	RAD21	HGNC	ENSG00000164754				53	0	0	69	12	14.8148
TNFRSF11B	0	genome.wustl.edu	37	8	119945260	119945260	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	119945260	119945260	C	T	SNP	TNFRSF11B	ENST00000297350	human	ensembl	74_37	-1	known	missense	c.310	p.V104M	0.757	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,prints_TNFR_11B,prints_TNFR_11,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF11B	HGNC	ENSG00000164761				82	0	0	77	17	18.0851
SNTB1	0	genome.wustl.edu	37	8	121705999	121705999	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	121705999	121705999	G	A	SNP	SNTB1	ENST00000395601	human	ensembl	74_37	-1	known	missense	c.721	p.R241W	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PDZ,pfam_Pleckstrin_homology,superfamily_PDZ,smart_Pleckstrin_homology,smart_PDZ,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTB1	HGNC	ENSG00000172164				84	0	0	94	29	23.5772
ZHX2	0	genome.wustl.edu	37	8	123966246	123966246	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	123966246	123966246	A	G	SNP	ZHX2	ENST00000314393	human	ensembl	74_37	+1	known	silent	c.2496	p.A832	0.001	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZHX2	HGNC	ENSG00000178764				34	0	0	42	11	20.7547
FER1L6	0	genome.wustl.edu	37	8	125083872	125083872	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	125083872	125083872	G	A	SNP	FER1L6	ENST00000399018	human	ensembl	74_37	+1	known	silent	c.4092	p.A1364	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,superfamily_ABC1_TM_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	FER1L6	HGNC	ENSG00000214814				56	0	0	60	14	18.9189
TRMT12	0	genome.wustl.edu	37	8	125463683	125463683	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	125463683	125463683	G	A	SNP	TRMT12	ENST00000328599	human	ensembl	74_37	+1	known	missense	c.515	p.R172H	1.000	NULL	pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	TRMT12	HGNC	ENSG00000183665				88	0	0	120	25	17.2414
KIAA0196	0	genome.wustl.edu	37	8	126087249	126087249	+	Silent	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	126087249	126087249	G	C	SNP	KIAA0196	ENST00000318410	human	ensembl	74_37	-1	known	silent	c.969	p.V323	1.000	pfam_WASH_strumpellin	pfam_WASH_strumpellin,superfamily_Ig_E-set	-	no_errors	KIAA0196	HGNC	ENSG00000164961				50	0	0	70	10	12.5
ADCY8	0	genome.wustl.edu	37	8	132002689	132002689	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	132002689	132002689	G	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.1060	p.R354W	0.995	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				225	0	0	249	61	19.6774
KCNQ3	0	genome.wustl.edu	37	8	133150209	133150209	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	133150209	133150209	G	A	SNP	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	silent	c.1623	p.Y541	0.197	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156				96	0	0	110	26	19.1176
TG	0	genome.wustl.edu	37	8	133920431	133920431	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	133920431	133920431	G	A	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.3848	p.R1283Q	1.000	pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832				46	0	0	57	13	18.5714
AGO2	0	genome.wustl.edu	37	8	141567270	141567270	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	141567270	141567270	C	A	SNP	AGO2	ENST00000220592	human	ensembl	74_37	-1	known	missense	c.944	p.R315M	1.000	pfam_PAZ_dom,superfamily_PAZ_dom,smart_PAZ_dom,pfscan_PAZ_dom	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO2	HGNC	ENSG00000123908				138	0	0	122	29	19.2053
BAI1	0	genome.wustl.edu	37	8	143570761	143570761	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	143570761	143570761	C	T	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	missense	c.2593	p.R865C	1.000	pfam_DUF3497	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790				142	0	0	113	24	17.5182
LYPD2	0	genome.wustl.edu	37	8	143832520	143832520	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	143832520	143832520	A	G	SNP	LYPD2	ENST00000359228	human	ensembl	74_37	-1	known	missense	c.127	p.C43R	0.169	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LYPD2	HGNC	ENSG00000197353				143	1	0.694444	140	36	20.4545
ZC3H3	0	genome.wustl.edu	37	8	144590005	144590005	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	144590005	144590005	A	G	SNP	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	silent	c.1626	p.I542	0.166	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164				132	0	0	128	28	17.9487
ZC3H3	0	genome.wustl.edu	37	8	144620682	144620682	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	144620682	144620682	C	T	SNP	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	silent	c.855	p.P285	0.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164				154	0	0	119	34	22.2222
FAM83H	0	genome.wustl.edu	37	8	144812611	144812611	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	144812611	144812611	C	T	SNP	FAM83H	ENST00000388913	human	ensembl	74_37	-1	known	missense	c.142	p.A48T	0.979	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83H	HGNC	ENSG00000180921				67	0	0	63	13	17.1053
SCRIB	0	genome.wustl.edu	37	8	144891828	144891828	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	144891828	144891828	C	T	SNP	SCRIB	ENST00000320476	human	ensembl	74_37	-1	known	missense	c.1591	p.V531I	0.001	NULL	pfam_PDZ,pfam_Leu-rich_rpt,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	SCRIB	HGNC	ENSG00000180900				98	0	0	96	27	21.9512
PLEC	0	genome.wustl.edu	37	8	144995247	144995247	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	144995247	144995247	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.9153	p.F3051	0.501	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				114	0	0	128	32	20
PLEC	0	genome.wustl.edu	37	8	144997573	144997573	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	144997573	144997573	T	C	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.6935	p.E2312G	1.000	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				25	0	0	27	6	18.1818
SPATC1	0	genome.wustl.edu	37	8	145095835	145095835	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	145095835	145095835	T	C	SNP	SPATC1	ENST00000377470	human	ensembl	74_37	+1	known	missense	c.1133	p.V378A	0.000	NULL	NULL	-	no_errors	SPATC1	HGNC	ENSG00000186583				100	0	0	87	17	16.3462
FBXL6	0	genome.wustl.edu	37	8	145580025	145580025	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	145580025	145580025	C	T	SNP	FBXL6	ENST00000331890	human	ensembl	74_37	-1	known	missense	c.1160	p.R387H	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	superfamily_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp	-	no_errors	FBXL6	HGNC	ENSG00000182325				86	0	0	71	17	19.3182
CPSF1	0	genome.wustl.edu	37	8	145619907	145619907	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	145619907	145619907	G	A	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	silent	c.3519	p.T1173	0.158	pfam_Cleavage/polyA-sp_fac_asu_C	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894				27	0	0	34	4	10.5263
MFSD3	0	genome.wustl.edu	37	8	145736246	145736246	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	145736246	145736246	G	A	SNP	MFSD3	ENST00000301327	human	ensembl	74_37	+1	known	missense	c.1025	p.G342E	0.965	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD3	HGNC	ENSG00000167700				61	0	0	59	13	18.0556
ZNF517	0	genome.wustl.edu	37	8	146033518	146033518	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	146033518	146033518	G	A	SNP	ZNF517	ENST00000359971	human	ensembl	74_37	+1	known	missense	c.1217	p.G406D	0.002	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF517	HGNC	ENSG00000197363				37	0	0	40	11	21.5686
DLGAP2	0	genome.wustl.edu	37	8	1497106	1497106	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	1497106	1497106	C	T	SNP	DLGAP2	ENST00000421627	human	ensembl	74_37	+1	known	missense	c.247	p.R83W	0.860	NULL	pfam_GKAP	-	no_errors	DLGAP2	HGNC	ENSG00000198010				31	0	0	36	7	16.2791
MSR1	0	genome.wustl.edu	37	8	15967675	15967675	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	15967675	15967675	A	G	SNP	MSR1	ENST00000262101	human	ensembl	74_37	-1	known	silent	c.1275	p.S425	0.934	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	pfam_SRCR,pfam_Macro_scav_rcpt,pfam_Collagen,superfamily_Srcr_rcpt-rel,superfamily_STAT_TF_coiled-coil,smart_Srcr_rcpt-rel,prints_Macro_scav_rcpt,prints_SRCR,pfscan_SRCR	-	no_errors	MSR1	HGNC	ENSG00000038945				59	0	0	82	15	15.4639
CCAR2	0	genome.wustl.edu	37	8	22474994	22474994	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	22474994	22474994	G	T	SNP	CCAR2	ENST00000308511	human	ensembl	74_37	+1	known	missense	c.1907	p.R636L	0.962	NULL	superfamily_NA-bd_OB-fold	-	no_errors	CCAR2	HGNC	ENSG00000158941				106	0	0	125	22	14.966
RHOBTB2	0	genome.wustl.edu	37	8	22864481	22864481	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	22864481	22864481	G	A	SNP	RHOBTB2	ENST00000251822	human	ensembl	74_37	+1	known	silent	c.723	p.P241	0.929	superfamily_BTB/POZ_fold	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB2	HGNC	ENSG00000008853				132	0	0	131	28	17.6101
LOXL2	0	genome.wustl.edu	37	8	23190934	23190934	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	23190934	23190934	G	A	SNP	LOXL2	ENST00000389131	human	ensembl	74_37	-1	known	missense	c.946	p.R316W	1.000	NULL	pfam_Lysyl_oxidase,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Lysyl_oxidase,prints_SRCR	-	no_errors	LOXL2	HGNC	ENSG00000134013				107	0	0	101	21	17.2131
DOCK5	0	genome.wustl.edu	37	8	25258582	25258582	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	25258582	25258582	G	A	SNP	DOCK5	ENST00000276440	human	ensembl	74_37	+1	known	silent	c.4926	p.L1642	1.000	NULL	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK5	HGNC	ENSG00000147459				183	0	0	188	45	19.3133
KCTD9	0	genome.wustl.edu	37	8	25296837	25296837	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	25296837	25296837	G	A	SNP	KCTD9	ENST00000221200	human	ensembl	74_37	-1	known	missense	c.457	p.R153C	1.000	pfam_T1-type_BTB,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_5peptide_repeat,pfam_T1-type_BTB,pfam_K_channel_plant,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	KCTD9	HGNC	ENSG00000104756				21	0	0	34	4	10.5263
ESCO2	0	genome.wustl.edu	37	8	27650255	27650255	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	27650255	27650255	A	C	SNP	ESCO2	ENST00000305188	human	ensembl	74_37	+1	known	missense	c.1424	p.K475T	1.000	NULL	NULL	-	no_errors	ESCO2	HGNC	ENSG00000171320				14	0	0	22	13	37.1429
TEX15	0	genome.wustl.edu	37	8	30704079	30704079	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	30704079	30704079	C	A	SNP	TEX15	ENST00000256246	human	ensembl	74_37	-1	known	nonsense	c.2455	p.G819*	0.001	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863				54	0	0	60	15	20
CSMD1	0	genome.wustl.edu	37	8	3253799	3253799	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	3253799	3253799	A	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.2513	p.L838H	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				13	0	0	14	10	41.6667
KCNU1	0	genome.wustl.edu	37	8	36675233	36675233	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	36675233	36675233	G	A	SNP	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	missense	c.1061	p.R354H	0.020	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262				92	0	0	88	44	33.3333
KCNU1	0	genome.wustl.edu	37	8	36692338	36692338	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	36692338	36692338	A	T	SNP	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	missense	c.1247	p.N416I	1.000	prints_K_chnl_Ca-activ_BK_asu	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262				21	0	0	17	7	29.1667
KCNU1	0	genome.wustl.edu	37	8	36788639	36788639	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	36788639	36788639	C	T	SNP	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	silent	c.2907	p.H969	0.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262				99	0	0	97	22	18.4874
ADRB3	0	genome.wustl.edu	37	8	37822792	37822792	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	37822792	37822792	C	T	SNP	ADRB3	ENST00000345060	human	ensembl	74_37	-1	known	missense	c.1196	p.R399Q	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRB3_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam,prints_5HT6_rcpt	-	no_errors	ADRB3	HGNC	ENSG00000188778				10	0	0	11	4	26.6667
DDHD2	0	genome.wustl.edu	37	8	38117583	38117583	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	38117583	38117583	G	A	SNP	DDHD2	ENST00000397166	human	ensembl	74_37	+1	known	missense	c.2080	p.V694I	1.000	pfam_DDHD,pfscan_DDHD	pfam_DDHD,pfam_WWE-dom,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_DDHD,pfscan_WWE-dom	-	no_errors	DDHD2	HGNC	ENSG00000085788				46	0	0	58	5	7.93651
WHSC1L1	0	genome.wustl.edu	37	8	38194920	38194920	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	38194920	38194920	G	A	SNP	WHSC1L1	ENST00000317025	human	ensembl	74_37	-1	known	silent	c.813	p.G271	0.980	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	pfam_PWWP_dom,pfam_SET_dom,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	WHSC1L1	HGNC	ENSG00000147548				38	0	0	59	17	22.3684
HTRA4	0	genome.wustl.edu	37	8	38839286	38839286	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	38839286	38839286	G	T	SNP	HTRA4	ENST00000302495	human	ensembl	74_37	+1	known	nonsense	c.1114	p.G372*	1.000	NULL	pfam_Peptidase_S1,pfam_PDZ,pfam_Kazal_dom,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA4	HGNC	ENSG00000169495				47	0	0	67	18	21.1765
ADAM9	0	genome.wustl.edu	37	8	38934828	38934828	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	38934828	38934828	G	A	SNP	ADAM9	ENST00000487273	human	ensembl	74_37	+1	known	silent	c.1779	p.T593	0.032	pfam_ADAM_Cys-rich,smart_ADAM_Cys-rich	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM9	HGNC	ENSG00000168615				78	0	0	70	13	15.6627
AGPAT6	0	genome.wustl.edu	37	8	41456803	41456803	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	41456803	41456803	A	C	SNP	AGPAT6	ENST00000396987	human	ensembl	74_37	+1	known	missense	c.145	p.S49R	1.000	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	AGPAT6	HGNC	ENSG00000158669				75	0	0	76	17	18.2796
NKX6-3	0	genome.wustl.edu	37	8	41504781	41504781	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	41504781	41504781	C	T	SNP	NKX6-3	ENST00000524115	human	ensembl	74_37	-1	known	missense	c.94	p.A32T	0.000	NULL	superfamily_Homeodomain-like	-	no_errors	NKX6-3	HGNC	ENSG00000165066				28	0	0	22	4	15.3846
ANK1	0	genome.wustl.edu	37	8	41561606	41561606	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	41561606	41561606	C	T	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.2248	p.V750M	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534				107	0	0	97	17	14.9123
PRKDC	0	genome.wustl.edu	37	8	48732013	48732013	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	48732013	48732013	A	G	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.9392	p.V3131A	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				66	0	0	70	19	21.3483
PRKDC	0	genome.wustl.edu	37	8	48815346	48815346	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	48815346	48815346	C	T	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.3052	p.V1018M	1.000	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				20	0	0	28	10	26.3158
NPBWR1	0	genome.wustl.edu	37	8	53853263	53853263	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	53853263	53853263	C	T	SNP	NPBWR1	ENST00000331251	human	ensembl	74_37	+1	known	missense	c.796	p.P266S	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Opioid_rcpt	-	no_errors	NPBWR1	HGNC	ENSG00000183729				49	0	0	47	18	27.6923
OPRK1	0	genome.wustl.edu	37	8	54141919	54141919	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	54141919	54141919	G	A	SNP	OPRK1	ENST00000265572	human	ensembl	74_37	-1	known	nonsense	c.1081	p.R361*	0.819	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Kappa_opi_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OPRK1	HGNC	ENSG00000082556				65	0	0	49	13	20.9677
OPRK1	0	genome.wustl.edu	37	8	54142147	54142147	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	54142147	54142147	C	T	SNP	OPRK1	ENST00000265572	human	ensembl	74_37	-1	known	missense	c.853	p.V285I	0.058	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_GPCR_Rhodpsn,prints_Neuropept_B/W_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Kappa_opi_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OPRK1	HGNC	ENSG00000082556				67	0	0	77	15	16.3043
SOX17	0	genome.wustl.edu	37	8	55371807	55371807	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	55371807	55371807	C	T	SNP	SOX17	ENST00000297316	human	ensembl	74_37	+1	known	missense	c.497	p.A166V	0.134	NULL	pfam_Sox_C_TAD,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX17	HGNC	ENSG00000164736				17	0	0	17	7	29.1667
CHD7	0	genome.wustl.edu	37	8	61765442	61765442	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	61765442	61765442	G	A	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	missense	c.6158	p.R2053Q	0.987	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316				206	0	0	199	34	14.5923
MCPH1	0	genome.wustl.edu	37	8	6357399	6357399	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	6357399	6357399	C	T	SNP	MCPH1	ENST00000344683	human	ensembl	74_37	+1	known	silent	c.2163	p.H721	0.013	superfamily_BRCT_dom,pfscan_BRCT_dom	pfam_Microcephalin,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom,prints_BRCA1	-	no_errors	MCPH1	HGNC	ENSG00000147316				73	0	0	85	17	16.6667
TRIM55	0	genome.wustl.edu	37	8	67047354	67047354	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	67047354	67047354	G	A	SNP	TRIM55	ENST00000315962	human	ensembl	74_37	+1	known	silent	c.471	p.Q157	1.000	smart_Znf_B-box,pfscan_Znf_B-box	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM55	HGNC	ENSG00000147573				117	0	0	130	48	26.9663
SULF1	0	genome.wustl.edu	37	8	70476323	70476323	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	70476323	70476323	G	A	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.113	p.R38Q	1.000	pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573				60	0	0	78	18	18.75
SULF1	0	genome.wustl.edu	37	8	70488304	70488304	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	70488304	70488304	G	T	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.272	p.R91L	0.948	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573				58	0	0	51	7	12.069
LOC100132891	0	genome.wustl.edu	37	8	72967903	72967903	+	RNA	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	72967903	72967903	T	C	SNP	LOC100132891	ENST00000457356	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-383H13.1	Clone_based_vega_gene	ENSG00000235531				30	0	0	52	8	13.3333
JPH1	0	genome.wustl.edu	37	8	75227517	75227517	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	75227517	75227517	G	A	SNP	JPH1	ENST00000342232	human	ensembl	74_37	-1	known	missense	c.718	p.R240C	0.980	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH1	HGNC	ENSG00000104369				128	0	0	147	33	18.3333
PMP2	0	genome.wustl.edu	37	8	82356736	82356736	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	82356736	82356736	G	A	SNP	PMP2	ENST00000256103	human	ensembl	74_37	-1	known	missense	c.347	p.A116V	1.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	PMP2	HGNC	ENSG00000147588				17	0	0	34	6	15
ZFAND1	0	genome.wustl.edu	37	8	82627068	82627068	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	82627068	82627068	G	A	SNP	ZFAND1	ENST00000220669	human	ensembl	74_37	-1	known	missense	c.329	p.A110V	1.000	NULL	pfam_Znf_AN1,smart_Znf_AN1,pfscan_Znf_AN1	-	no_errors	ZFAND1	HGNC	ENSG00000104231				58	0	0	55	15	21.4286
SLC7A13	0	genome.wustl.edu	37	8	87229781	87229781	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	87229781	87229781	G	A	SNP	SLC7A13	ENST00000297524	human	ensembl	74_37	-1	known	missense	c.1097	p.T366M	0.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A13	HGNC	ENSG00000164893				37	0	0	49	7	12.5
MFHAS1	0	genome.wustl.edu	37	8	8747799	8747799	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	8747799	8747799	G	C	SNP	MFHAS1	ENST00000276282	human	ensembl	74_37	-1	known	missense	c.2770	p.P924A	1.000	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	MFHAS1	HGNC	ENSG00000147324				72	0	0	83	23	21.6981
NBN	0	genome.wustl.edu	37	8	90958413	90958413	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	90958413	90958413	T	C	SNP	NBN	ENST00000265433	human	ensembl	74_37	-1	known	missense	c.2025	p.I675M	0.000	pirsf_Nibrin_met	pfam_DNA-repair_Nbs1_C,pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_BRCT_dom,smart_FHA_dom,pirsf_Nibrin_met,pfscan_FHA_dom	-	no_errors	NBN	HGNC	ENSG00000104320				52	0	0	56	14	20
NECAB1	0	genome.wustl.edu	37	8	91929840	91929840	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	91929840	91929840	C	A	SNP	NECAB1	ENST00000417640	human	ensembl	74_37	+1	known	missense	c.478	p.Q160K	1.000	NULL	pfam_Antibiotic_mOase,superfamily_Dimeric_a/b-barrel,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NECAB1	HGNC	ENSG00000123119				29	0	0	37	24	39.3443
CDH17	0	genome.wustl.edu	37	8	95164109	95164109	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	95164109	95164109	C	A	SNP	CDH17	ENST00000027335	human	ensembl	74_37	-1	known	missense	c.1783	p.G595C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH17	HGNC	ENSG00000079112				74	0	0	65	13	16.6667
CORO2A	0	genome.wustl.edu	37	9	100897159	100897159	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	100897159	100897159	G	A	SNP	CORO2A	ENST00000343933	human	ensembl	74_37	-1	known	missense	c.397	p.R133C	0.919	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO2A	HGNC	ENSG00000106789				34	0	0	26	15	36.5854
MURC	0	genome.wustl.edu	37	9	103348453	103348453	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	103348453	103348453	G	A	SNP	MURC	ENST00000307584	human	ensembl	74_37	+1	known	missense	c.815	p.R272H	0.027	NULL	NULL	-	no_errors	MURC	HGNC	ENSG00000170681				132	0	0	116	30	20.5479
ZNF462	0	genome.wustl.edu	37	9	109690191	109690191	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	109690191	109690191	G	A	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	missense	c.3998	p.R1333Q	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				134	0	0	103	31	23.1343
ZNF462	0	genome.wustl.edu	37	9	109701240	109701240	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	109701240	109701240	G	A	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	missense	c.6459	p.M2153I	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				368	0	0	287	95	24.8691
PALM2-AKAP2	0	genome.wustl.edu	37	9	112686061	112686061	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	112686061	112686061	T	G	SNP	PALM2-AKAP2	ENST00000374530	human	ensembl	74_37	+1	known	missense	c.304	p.S102A	1.000	pfam_Paralemmin	pfam_Paralemmin,pfam_RII_binding_1	-	no_errors	PALM2-AKAP2	HGNC	ENSG00000157654				13	0	0	23	7	23.3333
SVEP1	0	genome.wustl.edu	37	9	113312184	113312184	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	113312184	113312184	G	A	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	silent	c.732	p.Y244	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124				33	0	0	24	4	14.2857
ZNF483	0	genome.wustl.edu	37	9	114304378	114304378	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	114304378	114304378	G	T	SNP	ZNF483	ENST00000309235	human	ensembl	74_37	+1	known	missense	c.1163	p.R388M	0.003	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF483	HGNC	ENSG00000173258				105	0	0	80	28	25.9259
ZFP37	0	genome.wustl.edu	37	9	115818897	115818897	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	115818897	115818897	C	T	SNP	ZFP37	ENST00000553380	human	ensembl	74_37	-1	known	silent	c.72	p.T24	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP37	HGNC	ENSG00000136866				200	0	0	148	47	24.1026
FKBP15	0	genome.wustl.edu	37	9	115948583	115948583	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	115948583	115948583	G	A	SNP	FKBP15	ENST00000238256	human	ensembl	74_37	-1	known	nonsense	c.1444	p.Q482*	1.000	NULL	pfam_PPIase_FKBP_dom,superfamily_Regulat_G_prot_signal_superfam,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP15	HGNC	ENSG00000119321				12	0	0	5	3	37.5
FKBP15	0	genome.wustl.edu	37	9	115962135	115962135	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	115962135	115962135	C	T	SNP	FKBP15	ENST00000238256	human	ensembl	74_37	-1	known	missense	c.607	p.A203T	1.000	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	pfam_PPIase_FKBP_dom,superfamily_Regulat_G_prot_signal_superfam,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP15	HGNC	ENSG00000119321				32	0	0	22	4	15.3846
AMBP	0	genome.wustl.edu	37	9	116835296	116835296	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	116835296	116835296	C	T	SNP	AMBP	ENST00000265132	human	ensembl	74_37	-1	known	silent	c.465	p.P155	0.002	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_A1-microglobln,prints_PstgldnD_synth,prints_Lipocalin	pfam_Prot_inh_Kunz-m,pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m,prints_A1-microglobln,prints_PstgldnD_synth,prints_Prot_inh_Kunz-m,prints_Lipocalin	-	no_errors	AMBP	HGNC	ENSG00000106927				31	0	0	17	7	29.1667
TNC	0	genome.wustl.edu	37	9	117827093	117827093	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	117827093	117827093	T	C	SNP	TNC	ENST00000350763	human	ensembl	74_37	-1	known	missense	c.3320	p.Q1107R	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982				104	0	0	89	34	27.6423
FOXD4	0	genome.wustl.edu	37	9	118118	118118	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	118118	118118	A	G	SNP	FOXD4	ENST00000382500	human	ensembl	74_37	-1	known	missense	c.2	p.M1T	0.980	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD4	HGNC	ENSG00000170122				260	0	0	248	24	8.82353
PAPPA	0	genome.wustl.edu	37	9	118950108	118950108	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	118950108	118950108	A	G	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	missense	c.1091	p.D364G	0.000	NULL	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752				52	0	0	48	14	22.5806
BRINP1	0	genome.wustl.edu	37	9	121930156	121930156	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	121930156	121930156	G	A	SNP	BRINP1	ENST00000265922	human	ensembl	74_37	-1	known	missense	c.1492	p.R498C	0.999	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP1	HGNC	ENSG00000078725				53	0	0	44	16	26.6667
CDK5RAP2	0	genome.wustl.edu	37	9	123298792	123298792	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	123298792	123298792	C	T	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.520	p.A174T	0.999	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861				29	0	0	28	7	20
TTLL11	0	genome.wustl.edu	37	9	124752032	124752032	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	124752032	124752032	G	A	SNP	TTLL11	ENST00000321582	human	ensembl	74_37	-1	known	silent	c.981	p.D327	0.001	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL11	HGNC	ENSG00000175764				137	0	0	132	44	25
OR1N1	0	genome.wustl.edu	37	9	125288680	125288680	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	125288680	125288680	G	C	SNP	OR1N1	ENST00000304880	human	ensembl	74_37	-1	known	missense	c.893	p.A298G	0.027	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1N1	HGNC	ENSG00000171505				45	0	0	38	9	19.1489
OR1K1	0	genome.wustl.edu	37	9	125563254	125563254	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	125563254	125563254	A	G	SNP	OR1K1	ENST00000277309	human	ensembl	74_37	+1	known	missense	c.853	p.M285V	0.993	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1K1	HGNC	ENSG00000165204				126	0	0	82	30	26.7857
SCAI	0	genome.wustl.edu	37	9	127764275	127764275	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	127764275	127764275	G	A	SNP	SCAI	ENST00000373549	human	ensembl	74_37	-1	known	silent	c.1182	p.G394	0.428	pfam_DUF3550,pirsf_UCP013022	pfam_DUF3550,pirsf_UCP013022	-	no_errors	SCAI	HGNC	ENSG00000173611				121	0	0	123	33	21.1538
MVB12B	0	genome.wustl.edu	37	9	129184183	129184183	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	129184183	129184183	G	A	SNP	MVB12B	ENST00000361171	human	ensembl	74_37	+1	known	missense	c.713	p.R238Q	1.000	pfam_FAM125	pfam_FAM125	-	no_errors	MVB12B	HGNC	ENSG00000196814				145	0	0	113	26	18.705
FAM129B	0	genome.wustl.edu	37	9	130271341	130271341	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	130271341	130271341	A	G	SNP	FAM129B	ENST00000373312	human	ensembl	74_37	-1	known	missense	c.1231	p.S411P	0.999	NULL	pfscan_Pleckstrin_homology	-	no_errors	FAM129B	HGNC	ENSG00000136830				36	0	0	28	8	22.2222
SH2D3C	0	genome.wustl.edu	37	9	130506877	130506877	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	130506877	130506877	G	A	SNP	SH2D3C	ENST00000314830	human	ensembl	74_37	-1	known	missense	c.1766	p.T589M	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,pfscan_RasGRF_CDC25	-	no_errors	SH2D3C	HGNC	ENSG00000095370				120	0	0	114	35	23.4899
DPM2	0	genome.wustl.edu	37	9	130698688	130698688	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	130698688	130698688	G	A	SNP	DPM2	ENST00000373110	human	ensembl	74_37	-1	putative	missense	c.340	p.P114S	0.000	NULL	pfam_DPM2	-	no_errors	DPM2	HGNC	ENSG00000136908				14	0	0	7	7	50
SLC27A4	0	genome.wustl.edu	37	9	131112801	131112801	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	131112801	131112801	G	A	SNP	SLC27A4	ENST00000300456	human	ensembl	74_37	+1	known	missense	c.824	p.R275H	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A4	HGNC	ENSG00000167114				32	0	0	20	19	48.7179
SPTAN1	0	genome.wustl.edu	37	9	131388887	131388887	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	131388887	131388887	G	A	SNP	SPTAN1	ENST00000358161	human	ensembl	74_37	+1	known	missense	c.6497	p.R2166H	0.991	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF_hand_dom,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694				43	0	0	33	8	19.5122
ZDHHC12	0	genome.wustl.edu	37	9	131483570	131483570	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	131483570	131483570	C	T	SNP	ZDHHC12	ENST00000372663	human	ensembl	74_37	-1	known	missense	c.694	p.D232N	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC12	HGNC	ENSG00000160446				13	0	0	2	5	71.4286
ZER1	0	genome.wustl.edu	37	9	131515105	131515105	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	131515105	131515105	C	T	SNP	ZER1	ENST00000291900	human	ensembl	74_37	-1	known	missense	c.770	p.R257H	1.000	NULL	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ZER1	HGNC	ENSG00000160445				96	0	0	67	19	22.093
NUP188	0	genome.wustl.edu	37	9	131733236	131733236	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	131733236	131733236	A	T	SNP	NUP188	ENST00000372577	human	ensembl	74_37	+1	known	missense	c.1112	p.D371V	1.000	pfam_Nucleoporin_Nup188	pfam_Nucleoporin_Nup188,superfamily_ARM-type_fold	-	no_errors	NUP188	HGNC	ENSG00000095319				108	0	0	104	25	19.3798
CRAT	0	genome.wustl.edu	37	9	131862842	131862842	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	131862842	131862842	C	A	SNP	CRAT	ENST00000318080	human	ensembl	74_37	-1	known	missense	c.932	p.G311V	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CRAT	HGNC	ENSG00000095321				74	0	0	44	20	31.25
PRDM12	0	genome.wustl.edu	37	9	133542071	133542071	+	Silent	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	133542071	133542071	C	A	SNP	PRDM12	ENST00000253008	human	ensembl	74_37	+1	known	silent	c.300	p.L100	0.114	smart_SET_dom,pirsf_Znf_PRDM12,pfscan_SET_dom	pfam_Znf_C2H2,smart_SET_dom,smart_Znf_C2H2-like,pirsf_Znf_PRDM12,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM12	HGNC	ENSG00000130711				113	0	0	79	30	27.5229
PPAPDC3	0	genome.wustl.edu	37	9	134165403	134165403	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	134165403	134165403	C	T	SNP	PPAPDC3	ENST00000372264	human	ensembl	74_37	+1	known	missense	c.19	p.R7W	0.998	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAPDC3	HGNC	ENSG00000160539				26	0	0	17	4	19.0476
PRRC2B	0	genome.wustl.edu	37	9	134321811	134321811	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	134321811	134321811	G	A	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.637	p.G213S	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723				37	0	0	36	16	30.7692
PRRC2B	0	genome.wustl.edu	37	9	134350981	134350981	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	134350981	134350981	C	T	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	silent	c.3465	p.N1155	0.022	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723				31	0	0	31	11	26.1905
PRRC2B	0	genome.wustl.edu	37	9	134354732	134354732	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	134354732	134354732	G	A	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.4852	p.V1618M	0.834	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723				30	0	0	20	10	33.3333
POMT1	0	genome.wustl.edu	37	9	134384333	134384333	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	134384333	134384333	T	C	SNP	POMT1	ENST00000372228	human	ensembl	74_37	+1	known	silent	c.463	p.L155	0.014	pfam_Glyco_trans_39	pfam_Glyco_trans_39,pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	-	no_errors	POMT1	HGNC	ENSG00000130714				40	0	0	49	16	24.6154
GFI1B	0	genome.wustl.edu	37	9	135863633	135863633	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	135863633	135863633	C	T	SNP	GFI1B	ENST00000339463	human	ensembl	74_37	+1	known	silent	c.288	p.S96	0.002	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GFI1B	HGNC	ENSG00000165702				118	0	0	73	20	21.5054
GFI1B	0	genome.wustl.edu	37	9	135864465	135864465	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	135864465	135864465	C	T	SNP	GFI1B	ENST00000339463	human	ensembl	74_37	+1	known	silent	c.528	p.H176	0.410	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GFI1B	HGNC	ENSG00000165702				57	0	0	32	10	23.8095
RPL7A	0	genome.wustl.edu	37	9	136217531	136217531	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	136217531	136217531	G	A	SNP	RPL7A	ENST00000323345	human	ensembl	74_37	+1	known	missense	c.575	p.R192H	0.842	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45,prints_Ribosomal_L7Ae/L8/Nhp2	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45,prints_Ribosomal_L7A/L8,prints_Ribosomal_L7Ae/L8/Nhp2	-	no_errors	RPL7A	HGNC	ENSG00000148303				38	0	0	31	10	24.3902
VAV2	0	genome.wustl.edu	37	9	136653484	136653484	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	136653484	136653484	C	T	SNP	VAV2	ENST00000371850	human	ensembl	74_37	-1	known	missense	c.1399	p.V467I	0.990	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH3_domain,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH2,prints_SH3_domain	-	no_errors	VAV2	HGNC	ENSG00000160293				79	0	0	54	14	20.5882
WDR5	0	genome.wustl.edu	37	9	137007769	137007769	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	137007769	137007769	C	T	SNP	WDR5	ENST00000358625	human	ensembl	74_37	+1	known	silent	c.456	p.S152	0.984	pfam_WD40_repeat,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR5	HGNC	ENSG00000196363				93	0	0	67	23	25.5556
MRPS2	0	genome.wustl.edu	37	9	138395682	138395682	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	138395682	138395682	G	A	SNP	MRPS2	ENST00000241600	human	ensembl	74_37	+1	known	silent	c.594	p.T198	0.991	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2	-	no_errors	MRPS2	HGNC	ENSG00000122140				96	0	0	64	21	24.7059
SOHLH1	0	genome.wustl.edu	37	9	138586271	138586271	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	138586271	138586271	G	A	SNP	SOHLH1	ENST00000425225	human	ensembl	74_37	-1	known	missense	c.908	p.T303M	0.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SOHLH1	HGNC	ENSG00000165643				59	0	0	35	10	22.2222
SOHLH1	0	genome.wustl.edu	37	9	138590922	138590922	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	138590922	138590922	G	A	SNP	SOHLH1	ENST00000425225	human	ensembl	74_37	-1	known	missense	c.116	p.S39L	0.021	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SOHLH1	HGNC	ENSG00000165643				29	0	0	30	10	25
SNAPC4	0	genome.wustl.edu	37	9	139286540	139286540	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	139286540	139286540	C	T	SNP	SNAPC4	ENST00000298532	human	ensembl	74_37	-1	known	missense	c.829	p.A277T	0.641	superfamily_Homeodomain-like,smart_SANT/Myb	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC	ENSG00000165684				128	0	0	99	29	22.6562
SEC16A	0	genome.wustl.edu	37	9	139360442	139360442	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	139360442	139360442	G	A	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	silent	c.4275	p.A1425	0.000	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396				81	0	0	54	20	27.027
NOTCH1	0	genome.wustl.edu	37	9	139401320	139401320	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	139401320	139401320	C	T	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	missense	c.3749	p.G1250D	1.000	pfam_EG-like_dom,pfam_EGF_extracell,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400				22	0	0	17	4	19.0476
ABCA2	0	genome.wustl.edu	37	9	139904435	139904435	+	Silent	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	139904435	139904435	C	A	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	silent	c.6495	p.R2165	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC	ENSG00000107331				18	0	0	15	4	21.0526
ABCA2	0	genome.wustl.edu	37	9	139915842	139915842	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	139915842	139915842	A	G	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	splice_site	c.897+2	e8+2	1.000	-	-	-	no_errors	ABCA2	HGNC	ENSG00000107331				35	0	0	29	6	17.1429
GRIN1	0	genome.wustl.edu	37	9	140033928	140033928	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	140033928	140033928	G	A	SNP	GRIN1	ENST00000471122	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	GRIN1	HGNC	ENSG00000176884				22	0	0	17	5	22.7273
ANAPC2	0	genome.wustl.edu	37	9	140080740	140080740	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	140080740	140080740	C	T	SNP	ANAPC2	ENST00000323927	human	ensembl	74_37	-1	known	missense	c.809	p.R270Q	1.000	NULL	pfam_Cullin_N,pfam_APC_su2_C,superfamily_Cullin_homology,smart_Cullin_homology,pfscan_Cullin_homology	-	no_errors	ANAPC2	HGNC	ENSG00000176248				33	0	0	21	7	25
CACNA1B	0	genome.wustl.edu	37	9	141016148	141016148	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	141016148	141016148	G	T	SNP	CACNA1B	ENST00000277551	human	ensembl	74_37	+1	novel	missense	c.6530	p.C2177F	0.994	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				67	0	0	58	13	18.3099
NFIB	0	genome.wustl.edu	37	9	14307161	14307161	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	14307161	14307161	A	C	SNP	NFIB	ENST00000397581	human	ensembl	74_37	-1	known	missense	c.389	p.L130R	1.000	pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIB	HGNC	ENSG00000147862				109	0	0	80	29	26.6055
CCDC171	0	genome.wustl.edu	37	9	15779035	15779035	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	15779035	15779035	C	T	SNP	CCDC171	ENST00000380701	human	ensembl	74_37	+1	known	missense	c.2968	p.R990C	1.000	NULL	superfamily_STAT_TF_coiled-coil	-	no_errors	CCDC171	HGNC	ENSG00000164989				44	0	0	42	9	17.6471
ADAMTSL1	0	genome.wustl.edu	37	9	18817125	18817125	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	18817125	18817125	C	T	SNP	ADAMTSL1	ENST00000380548	human	ensembl	74_37	+1	novel	missense	c.3824	p.T1275M	0.998	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031				21	0	0	20	3	13.0435
DENND4C	0	genome.wustl.edu	37	9	19316781	19316781	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	19316781	19316781	T	C	SNP	DENND4C	ENST00000602925	human	ensembl	74_37	+1	known	missense	c.1751	p.I584T	1.000	pfam_dDENN_dom,smart_dDENN_dom,pfscan_dDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4C	HGNC	ENSG00000137145				107	1	0.925926	94	42	30.8824
SMARCA2	0	genome.wustl.edu	37	9	2088615	2088615	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	2088615	2088615	T	C	SNP	SMARCA2	ENST00000349721	human	ensembl	74_37	+1	known	splice_site	c.2883+2	e18+2	1.000	-	-	-	no_errors	SMARCA2	HGNC	ENSG00000080503				80	0	0	56	24	30
CDKN2A	0	genome.wustl.edu	37	9	21974679	21974679	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	21974679	21974679	G	A	SNP	CDKN2A	ENST00000446177	human	ensembl	74_37	-1	known	nonsense	c.148	p.Q50*	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2A	HGNC	ENSG00000147889				234	0	0	211	71	25.1773
DOCK8	0	genome.wustl.edu	37	9	312086	312086	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	312086	312086	G	T	SNP	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	missense	c.661	p.D221Y	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099				103	0	0	92	40	30.303
TAF1L	0	genome.wustl.edu	37	9	32633058	32633058	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	32633058	32633058	C	T	SNP	TAF1L	ENST00000242310	human	ensembl	74_37	-1	known	silent	c.2520	p.R840	0.987	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1L	HGNC	ENSG00000122728				105	0	0	79	15	15.9574
NUDT2	0	genome.wustl.edu	37	9	34343338	34343338	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	34343338	34343338	G	A	SNP	NUDT2	ENST00000346365	human	ensembl	74_37	+1	known	missense	c.344	p.R115H	1.000	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,prints_Tetra_PHTase	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,prints_Tetra_PHTase	-	no_errors	NUDT2	HGNC	ENSG00000164978				102	0	0	84	26	23.6364
KIAA1161	0	genome.wustl.edu	37	9	34371158	34371158	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	34371158	34371158	C	T	SNP	KIAA1161	ENST00000297625	human	ensembl	74_37	-1	known	missense	c.1682	p.R561H	0.060	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	-	no_errors	KIAA1161	HGNC	ENSG00000164976				24	0	0	16	9	36
VCP	0	genome.wustl.edu	37	9	35059577	35059577	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	35059577	35059577	A	G	SNP	VCP	ENST00000358901	human	ensembl	74_37	-1	known	silent	c.1917	p.L639	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	pfam_ATPase_AAA_core,pfam_CDC4_N-term_subdom,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Cdc48_dom2,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_Vps4_C,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	-	no_errors	VCP	HGNC	ENSG00000165280				69	0	0	45	28	38.3562
STOML2	0	genome.wustl.edu	37	9	35102160	35102160	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	35102160	35102160	C	T	SNP	STOML2	ENST00000356493	human	ensembl	74_37	-1	known	missense	c.215	p.R72Q	1.000	pfam_Band_7,smart_Band_7	pfam_Band_7,smart_Band_7,prints_Stomatin	-	no_errors	STOML2	HGNC	ENSG00000165283				59	0	0	56	18	24.3243
CD72	0	genome.wustl.edu	37	9	35616088	35616088	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	35616088	35616088	C	T	SNP	CD72	ENST00000259633	human	ensembl	74_37	-1	known	silent	c.540	p.A180	0.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CD72	HGNC	ENSG00000137101				147	0	0	132	38	22.3529
TLN1	0	genome.wustl.edu	37	9	35719120	35719120	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	35719120	35719120	G	A	SNP	TLN1	ENST00000314888	human	ensembl	74_37	-1	known	missense	c.1847	p.A616V	1.000	pfam_Talin_cent,superfamily_Talin_cent	pfam_Talin_cent,pfam_Vinculin-bd_dom,pfam_ILWEQ_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN1	HGNC	ENSG00000137076				69	0	0	38	15	28.3019
GNE	0	genome.wustl.edu	37	9	36246258	36246258	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	36246258	36246258	C	T	SNP	GNE	ENST00000396594	human	ensembl	74_37	-1	known	missense	c.479	p.R160Q	1.000	pfam_UDP_GlcNAc_Epimerase_2,tigrfam_UDP-GlcNAc_Epase	pfam_UDP_GlcNAc_Epimerase_2,pfam_ROK,prints_Hexokinase,tigrfam_UDP-GlcNAc_Epase	-	no_errors	GNE	HGNC	ENSG00000159921				56	0	0	63	17	21.25
GRHPR	0	genome.wustl.edu	37	9	37424908	37424908	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	37424908	37424908	G	A	SNP	GRHPR	ENST00000318158	human	ensembl	74_37	+1	known	silent	c.150	p.A50	0.002	pfam_D-isomer_2_OHA_DH_cat_dom	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,pfam_6PGDH_NADP-bd	-	no_errors	GRHPR	HGNC	ENSG00000137106				51	0	0	43	7	14
SHB	0	genome.wustl.edu	37	9	38016116	38016116	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	38016116	38016116	C	T	SNP	SHB	ENST00000377707	human	ensembl	74_37	-1	known	missense	c.730	p.D244N	0.995	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SHB	HGNC	ENSG00000107338				74	0	0	66	19	22.3529
PPAPDC2	0	genome.wustl.edu	37	9	4662417	4662417	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	4662417	4662417	C	T	SNP	PPAPDC2	ENST00000381883	human	ensembl	74_37	+1	known	silent	c.42	p.G14	0.029	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAPDC2	HGNC	ENSG00000205808				14	0	0	7	5	41.6667
GLDC	0	genome.wustl.edu	37	9	6554674	6554674	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	6554674	6554674	G	A	SNP	GLDC	ENST00000321612	human	ensembl	74_37	-1	known	silent	c.2310	p.I770	0.761	pfam_GDC-P_N,superfamily_PyrdxlP-dep_Trfase,tigrfam_GDC_P_homo	pfam_GDC-P_N,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase,tigrfam_GDC_P_homo	-	no_errors	GLDC	HGNC	ENSG00000178445				31	0	0	24	3	11.1111
CBWD6	0	genome.wustl.edu	37	9	69247573	69247573	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	69247573	69247573	C	T	SNP	CBWD6	ENST00000377457	human	ensembl	74_37	-1	known	missense	c.439	p.A147T	1.000	pfam_CobW/HypB/UreG_dom,superfamily_P-loop_NTPase	pfam_CobW/HypB/UreG_dom,pfam_Cbl_biosynth_CobW-like_C,superfamily_P-loop_NTPase,superfamily_Cbl_biosynth_CobW-like_C,smart_Cbl_biosynth_CobW-like_C	-	no_errors	CBWD6	HGNC	ENSG00000204790				13	0	0	29	4	12.1212
PGM5	0	genome.wustl.edu	37	9	70993121	70993121	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	70993121	70993121	C	T	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	nonsense	c.268	p.R90*	0.949	pfam_A-D-PHexomutase_a/b/a-I,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330				63	0	0	102	9	8.10811
PGM5	0	genome.wustl.edu	37	9	70993145	70993145	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	70993145	70993145	A	G	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	missense	c.292	p.I98V	1.000	pfam_A-D-PHexomutase_a/b/a-I,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330				60	0	0	91	5	5.20833
APBA1	0	genome.wustl.edu	37	9	72131493	72131493	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	72131493	72131493	C	T	SNP	APBA1	ENST00000265381	human	ensembl	74_37	-1	known	missense	c.634	p.G212S	1.000	NULL	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA1	HGNC	ENSG00000107282				28	0	0	21	8	27.5862
APBA1	0	genome.wustl.edu	37	9	72131519	72131519	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	72131519	72131519	T	A	SNP	APBA1	ENST00000265381	human	ensembl	74_37	-1	known	missense	c.608	p.D203V	1.000	NULL	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA1	HGNC	ENSG00000107282				35	0	0	16	8	33.3333
FOXB2	0	genome.wustl.edu	37	9	79635658	79635658	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	79635658	79635658	C	T	SNP	FOXB2	ENST00000376708	human	ensembl	74_37	+1	known	missense	c.1088	p.P363L	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head,prints_Antifreeze_1	-	no_errors	FOXB2	HGNC	ENSG00000204612				21	0	0	11	8	42.1053
CEP78	0	genome.wustl.edu	37	9	80858424	80858424	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	80858424	80858424	G	A	SNP	CEP78	ENST00000376597	human	ensembl	74_37	+1	known	missense	c.650	p.R217H	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	CEP78	HGNC	ENSG00000148019				52	0	0	49	14	22.2222
PSAT1	0	genome.wustl.edu	37	9	80942970	80942970	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	80942970	80942970	T	C	SNP	PSAT1	ENST00000376588	human	ensembl	74_37	+1	known	silent	c.873	p.C291	0.995	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	-	no_errors	PSAT1	HGNC	ENSG00000135069				32	0	0	26	12	31.5789
KIF27	0	genome.wustl.edu	37	9	86495292	86495292	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	86495292	86495292	G	T	SNP	KIF27	ENST00000297814	human	ensembl	74_37	-1	known	missense	c.2563	p.L855I	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF27	HGNC	ENSG00000165115				43	0	0	58	17	22.6667
KIF27	0	genome.wustl.edu	37	9	86506302	86506302	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	86506302	86506302	C	T	SNP	KIF27	ENST00000297814	human	ensembl	74_37	-1	known	missense	c.1717	p.A573T	0.992	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF27	HGNC	ENSG00000165115				61	0	0	59	11	15.7143
SPATA31E1	0	genome.wustl.edu	37	9	90499521	90499521	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	90499521	90499521	T	C	SNP	SPATA31E1	ENST00000325643	human	ensembl	74_37	+1	known	missense	c.380	p.L127P	0.001	NULL	NULL	-	no_errors	SPATA31E1	HGNC	ENSG00000177992				58	0	0	45	18	28.5714
ROR2	0	genome.wustl.edu	37	9	94495678	94495678	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	94495678	94495678	G	A	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	silent	c.663	p.D221	1.000	pirsf_Tyr_kinase_rcpt_ROR,pfam_Frizzled_dom,superfamily_Frizzled_dom,pfscan_Frizzled_dom	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR2	HGNC	ENSG00000169071				44	0	0	26	9	25.7143
WNK2	0	genome.wustl.edu	37	9	95947742	95947742	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	95947742	95947742	G	C	SNP	WNK2	ENST00000297954	human	ensembl	74_37	+1	known	missense	c.531	p.E177D	0.932	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK2	HGNC	ENSG00000165238				44	0	0	22	5	18.5185
WNK2	0	genome.wustl.edu	37	9	96055229	96055229	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	96055229	96055229	G	A	SNP	WNK2	ENST00000297954	human	ensembl	74_37	+1	known	missense	c.5593	p.V1865M	0.001	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK2	HGNC	ENSG00000165238				18	0	0	15	4	21.0526
FAM120A	0	genome.wustl.edu	37	9	96291730	96291730	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	96291730	96291730	G	A	SNP	FAM120A	ENST00000333936	human	ensembl	74_37	+1	known	silent	c.1686	p.S562	0.985	NULL	NULL	-	no_errors	FAM120A	HGNC	ENSG00000048828				68	0	0	62	18	22.5
ZNF169	0	genome.wustl.edu	37	9	97063084	97063084	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	97063084	97063084	T	C	SNP	ZNF169	ENST00000395395	human	ensembl	74_37	+1	known	missense	c.1244	p.V415A	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF169	HGNC	ENSG00000175787				85	0	0	86	16	15.6863
DMRT3	0	genome.wustl.edu	37	9	977277	977277	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	977277	977277	C	T	SNP	DMRT3	ENST00000190165	human	ensembl	74_37	+1	known	silent	c.276	p.R92	1.000	NULL	pfam_DM_DNA-bd,pfam_DMA,superfamily_DM_DNA-bd,superfamily_UBA-like,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRT3	HGNC	ENSG00000064218				22	0	0	12	7	36.8421
MT-RNR1	0	genome.wustl.edu	37	MT	1360	1360	+	RNA	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	MT	1360	1360	G	A	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459				422	0	0	10	23	69.697
FAM199X	0	genome.wustl.edu	37	X	103432971	103432971	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	103432971	103432971	G	A	SNP	FAM199X	ENST00000493442	human	ensembl	74_37	+1	known	missense	c.980	p.R327Q	1.000	NULL	NULL	-	no_errors	FAM199X	HGNC	ENSG00000123575				243	0	0	222	61	21.5548
TRPC5	0	genome.wustl.edu	37	X	111155847	111155847	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	111155847	111155847	C	T	SNP	TRPC5	ENST00000262839	human	ensembl	74_37	-1	known	missense	c.572	p.R191H	1.000	pfam_TRP_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC5_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC5	HGNC	ENSG00000072315				140	0	0	147	44	23.0366
NKAP	0	genome.wustl.edu	37	X	119077561	119077561	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	119077561	119077561	G	A	SNP	NKAP	ENST00000371410	human	ensembl	74_37	-1	known	missense	c.8	p.P3L	0.263	NULL	pfam_DUF926	-	no_errors	NKAP	HGNC	ENSG00000101882				62	0	0	40	12	23.0769
GRIA3	0	genome.wustl.edu	37	X	122616646	122616646	+	RNA	SNP	T	T	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	122616646	122616646	T	A	SNP	GRIA3	ENST00000460123	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRIA3	HGNC	ENSG00000125675				150	0	0	127	48	27.4286
STAG2	0	genome.wustl.edu	37	X	123217306	123217306	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	123217306	123217306	C	A	SNP	STAG2	ENST00000218089	human	ensembl	74_37	+1	known	missense	c.2960	p.P987Q	1.000	NULL	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG2	HGNC	ENSG00000101972				52	0	0	38	9	19.1489
DCAF12L1	0	genome.wustl.edu	37	X	125685932	125685932	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	125685932	125685932	C	T	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	nonsense	c.660	p.W220*	0.986	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				94	0	0	71	27	27.551
SASH3	0	genome.wustl.edu	37	X	128914080	128914080	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	128914080	128914080	C	T	SNP	SASH3	ENST00000356892	human	ensembl	74_37	+1	known	missense	c.7	p.R3C	1.000	NULL	pfam_rSAM/SH3_domain-containing,pfam_SAM_2,pfam_SAM_type1,pfam_SH3_2,superfamily_SAM/pointed,superfamily_SH3_domain,smart_SH3_domain,smart_SAM,pfscan_SAM	-	no_errors	SASH3	HGNC	ENSG00000122122				48	0	0	39	13	25
RAB33A	0	genome.wustl.edu	37	X	129318570	129318570	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	129318570	129318570	C	T	SNP	RAB33A	ENST00000257017	human	ensembl	74_37	+1	known	silent	c.570	p.N190	0.900	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB33A	HGNC	ENSG00000134594				101	0	0	90	26	22.4138
IGSF1	0	genome.wustl.edu	37	X	130419315	130419315	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	130419315	130419315	C	T	SNP	IGSF1	ENST00000370903	human	ensembl	74_37	-1	known	missense	c.505	p.A169T	0.339	smart_Ig_sub,smart_Ig_sub2	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGSF1	HGNC	ENSG00000147255				148	0	0	127	28	18.0645
OFD1	0	genome.wustl.edu	37	X	13764538	13764538	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	13764538	13764538	A	C	SNP	OFD1	ENST00000340096	human	ensembl	74_37	+1	known	missense	c.618	p.E206D	1.000	NULL	superfamily_Lipoprotein_6,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	OFD1	HGNC	ENSG00000046651				57	0	0	54	16	22.8571
SOX3	0	genome.wustl.edu	37	X	139586638	139586638	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	139586638	139586638	G	A	SNP	SOX3	ENST00000370536	human	ensembl	74_37	-1	known	silent	c.588	p.R196	0.855	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX3	HGNC	ENSG00000134595				114	0	0	76	24	24
CNGA2	0	genome.wustl.edu	37	X	150907032	150907032	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	150907032	150907032	C	T	SNP	CNGA2	ENST00000329903	human	ensembl	74_37	+1	known	missense	c.77	p.A26V	1.000	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA2	HGNC	ENSG00000183862				156	0	0	161	35	17.8571
GABRQ	0	genome.wustl.edu	37	X	151815583	151815583	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	151815583	151815583	C	T	SNP	GABRQ	ENST00000370306	human	ensembl	74_37	+1	known	missense	c.481	p.R161C	0.997	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAt_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABAAb_rcpt,prints_GABAAa_rcpt,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRQ	HGNC	ENSG00000147402				63	0	0	50	40	44.4444
MAGEA1	0	genome.wustl.edu	37	X	152482579	152482579	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	152482579	152482579	G	A	SNP	MAGEA1	ENST00000356661	human	ensembl	74_37	-1	known	silent	c.432	p.F144	0.005	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA1	HGNC	ENSG00000198681				208	0	0	239	54	18.43
TREX2	0	genome.wustl.edu	37	X	152710780	152710780	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	152710780	152710780	G	A	SNP	TREX2	ENST00000334497	human	ensembl	74_37	-1	known	missense	c.238	p.R80C	0.999	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	TREX2	HGNC	ENSG00000183479				31	0	0	23	5	17.8571
HAUS7	0	genome.wustl.edu	37	X	152722363	152722363	+	RNA	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	152722363	152722363	C	T	SNP	HAUS7	ENST00000464993	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HAUS7	HGNC	ENSG00000213397				8	0	0	5	3	37.5
ATP2B3	0	genome.wustl.edu	37	X	152845747	152845747	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	152845747	152845747	G	A	SNP	ATP2B3	ENST00000263519	human	ensembl	74_37	+1	known	silent	c.3654	p.T1218	0.958	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B3	HGNC	ENSG00000067842				73	0	0	80	21	20.7921
L1CAM	0	genome.wustl.edu	37	X	153128217	153128217	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	153128217	153128217	G	A	SNP	L1CAM	ENST00000543994	human	ensembl	74_37	-1	known	silent	c.3681	p.F1227	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	L1CAM	HGNC	ENSG00000198910				100	0	0	115	25	17.8571
L1CAM	0	genome.wustl.edu	37	X	153135085	153135085	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	153135085	153135085	C	T	SNP	L1CAM	ENST00000543994	human	ensembl	74_37	-1	known	missense	c.1163	p.R388H	0.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	L1CAM	HGNC	ENSG00000198910				40	0	0	26	5	16.129
FLNA	0	genome.wustl.edu	37	X	153588685	153588685	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	153588685	153588685	C	T	SNP	FLNA	ENST00000369850	human	ensembl	74_37	-1	known	missense	c.3478	p.A1160T	0.007	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924				72	0	0	50	31	38.2716
ATP6AP1	0	genome.wustl.edu	37	X	153660654	153660654	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	153660654	153660654	G	A	SNP	ATP6AP1	ENST00000369762	human	ensembl	74_37	+1	known	missense	c.406	p.V136I	0.989	pfam_BIG/ATPase_V1_suS1	pfam_BIG/ATPase_V1_suS1	-	no_errors	ATP6AP1	HGNC	ENSG00000071553				50	0	0	39	13	25
F8A1	0	genome.wustl.edu	37	X	154115595	154115595	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	154115595	154115595	G	A	SNP	F8A1	ENST00000369446	human	ensembl	74_37	+1	known	missense	c.946	p.E316K	0.975	NULL	NULL	-	no_errors	F8A1	HGNC	ENSG00000197932				39	0	0	41	10	19.6078
F8	0	genome.wustl.edu	37	X	154159624	154159624	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	154159624	154159624	C	T	SNP	F8	ENST00000360256	human	ensembl	74_37	-1	known	missense	c.2441	p.R814Q	0.017	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010				110	0	0	147	29	16.4773
MAGEB17	0	genome.wustl.edu	37	X	16189313	16189313	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	16189313	16189313	G	A	SNP	MAGEB17	ENST00000400003	human	ensembl	74_37	+1	known	missense	c.808	p.E270K	0.076	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB17	HGNC	ENSG00000182798				54	0	0	58	16	21.6216
BEND2	0	genome.wustl.edu	37	X	18192292	18192292	+	Silent	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	18192292	18192292	A	G	SNP	BEND2	ENST00000380033	human	ensembl	74_37	-1	known	silent	c.1839	p.G613	0.000	NULL	pfam_BEN_domain	-	no_errors	BEND2	HGNC	ENSG00000177324				75	0	0	99	28	22.0472
KLHL34	0	genome.wustl.edu	37	X	21674642	21674642	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	21674642	21674642	G	A	SNP	KLHL34	ENST00000379499	human	ensembl	74_37	-1	known	missense	c.1265	p.A422V	0.006	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL34	HGNC	ENSG00000185915				22	0	0	23	7	23.3333
MAGEB6	0	genome.wustl.edu	37	X	26212529	26212529	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	26212529	26212529	G	A	SNP	MAGEB6	ENST00000379034	human	ensembl	74_37	+1	known	missense	c.566	p.R189H	0.000	NULL	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB6	HGNC	ENSG00000176746				75	0	0	70	20	22.2222
PPP2R3B	0	genome.wustl.edu	37	X	299443	299443	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	299443	299443	G	A	SNP	PPP2R3B	ENST00000390665	human	ensembl	74_37	-1	known	silent	c.1473	p.D491	0.269	NULL	pfscan_EF_hand_dom	-	no_errors	PPP2R3B	HGNC	ENSG00000167393				46	0	0	30	9	23.0769
MAGEB2	0	genome.wustl.edu	37	X	30236743	30236743	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	30236743	30236743	C	T	SNP	MAGEB2	ENST00000378988	human	ensembl	74_37	+1	known	missense	c.46	p.R16C	0.049	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB2	HGNC	ENSG00000099399				54	0	0	44	9	16.9811
PPP2R3B	0	genome.wustl.edu	37	X	302619	302619	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	302619	302619	G	A	SNP	PPP2R3B	ENST00000390665	human	ensembl	74_37	-1	known	nonsense	c.1084	p.R362*	0.652	NULL	pfscan_EF_hand_dom	-	no_errors	PPP2R3B	HGNC	ENSG00000167393				182	0	0	127	35	21.6049
MXRA5	0	genome.wustl.edu	37	X	3240888	3240888	+	Silent	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	3240888	3240888	T	C	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	silent	c.2838	p.A946	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825				63	0	0	56	18	24.3243
CASK	0	genome.wustl.edu	37	X	41712439	41712439	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	41712439	41712439	G	A	SNP	CASK	ENST00000378163	human	ensembl	74_37	-1	known	missense	c.101	p.T34I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Guanylate_kin-like	-	no_errors	CASK	HGNC	ENSG00000147044				41	0	0	35	10	22.2222
PHF16	0	genome.wustl.edu	37	X	46913989	46913989	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	46913989	46913989	C	T	SNP	PHF16	ENST00000218343	human	ensembl	74_37	+1	known	nonsense	c.1402	p.R468*	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF16	HGNC	ENSG00000102221				31	0	0	28	7	20
PHF16	0	genome.wustl.edu	37	X	46918475	46918475	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	46918475	46918475	G	T	SNP	PHF16	ENST00000218343	human	ensembl	74_37	+1	known	missense	c.2468	p.R823M	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF16	HGNC	ENSG00000102221				49	0	0	50	15	23.0769
RBM10	0	genome.wustl.edu	37	X	47038780	47038780	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	47038780	47038780	C	T	SNP	RBM10	ENST00000377604	human	ensembl	74_37	+1	known	missense	c.787	p.R263W	0.922	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM10	HGNC	ENSG00000182872				19	0	0	7	10	58.8235
ZNF81	0	genome.wustl.edu	37	X	47775019	47775019	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	47775019	47775019	G	A	SNP	ZNF81	ENST00000338637	human	ensembl	74_37	+1	known	missense	c.974	p.R325K	1.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF81	HGNC	ENSG00000197779				32	0	0	15	7	31.8182
PORCN	0	genome.wustl.edu	37	X	48374499	48374499	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	48374499	48374499	C	T	SNP	PORCN	ENST00000326194	human	ensembl	74_37	+1	known	missense	c.1138	p.R380W	0.989	pfam_MBOAT_fam	pfam_MBOAT_fam	-	no_errors	PORCN	HGNC	ENSG00000102312				55	0	0	37	8	17.7778
PCSK1N	0	genome.wustl.edu	37	X	48689686	48689686	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	48689686	48689686	C	T	SNP	PCSK1N	ENST00000218230	human	ensembl	74_37	-1	known	missense	c.767	p.R256H	0.021	NULL	pfam_ProSAAS	-	no_errors	PCSK1N	HGNC	ENSG00000102109				15	0	0	12	3	20
KCND1	0	genome.wustl.edu	37	X	48826076	48826076	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	48826076	48826076	G	A	SNP	KCND1	ENST00000218176	human	ensembl	74_37	-1	known	silent	c.603	p.I201	0.908	prints_K_chnl	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND1	HGNC	ENSG00000102057				33	0	0	32	8	20
CCNB3	0	genome.wustl.edu	37	X	50052225	50052225	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	50052225	50052225	G	A	SNP	CCNB3	ENST00000276014	human	ensembl	74_37	+1	known	silent	c.1056	p.L352	0.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082				100	0	0	97	34	25.9542
SHROOM4	0	genome.wustl.edu	37	X	50350982	50350982	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	50350982	50350982	G	A	SNP	SHROOM4	ENST00000289292	human	ensembl	74_37	-1	known	missense	c.3160	p.R1054C	0.996	NULL	pfam_ASD2,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM4	HGNC	ENSG00000158352				58	0	0	46	15	24.5902
SMC1A	0	genome.wustl.edu	37	X	53426556	53426556	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	53426556	53426556	C	T	SNP	SMC1A	ENST00000322213	human	ensembl	74_37	-1	known	silent	c.2517	p.E839	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge,prints_Tropomyosin	-	no_errors	SMC1A	HGNC	ENSG00000072501				39	0	0	46	6	11.5385
HUWE1	0	genome.wustl.edu	37	X	53565987	53565987	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	53565987	53565987	C	T	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.11687	p.S3896N	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758				39	0	0	32	15	31.9149
PFKFB1	0	genome.wustl.edu	37	X	54971960	54971960	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	54971960	54971960	A	G	SNP	PFKFB1	ENST00000375006	human	ensembl	74_37	-1	known	missense	c.1010	p.M337T	1.000	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	-	no_errors	PFKFB1	HGNC	ENSG00000158571				22	0	0	15	8	34.7826
MAGEH1	0	genome.wustl.edu	37	X	55479176	55479176	+	Silent	SNP	A	A	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	55479176	55479176	A	C	SNP	MAGEH1	ENST00000342972	human	ensembl	74_37	+1	known	silent	c.369	p.G123	0.000	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEH1	HGNC	ENSG00000187601				81	0	0	68	29	29.8969
LAS1L	0	genome.wustl.edu	37	X	64743993	64743993	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	64743993	64743993	G	A	SNP	LAS1L	ENST00000374811	human	ensembl	74_37	-1	known	missense	c.1243	p.R415W	0.998	NULL	pfam_Las1	-	no_errors	LAS1L	HGNC	ENSG00000001497				34	0	0	21	8	27.5862
NLGN3	0	genome.wustl.edu	37	X	70367787	70367787	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	70367787	70367787	T	C	SNP	NLGN3	ENST00000358741	human	ensembl	74_37	+1	known	missense	c.188	p.L63P	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN3	HGNC	ENSG00000196338				39	0	0	18	7	28
ZMYM3	0	genome.wustl.edu	37	X	70467211	70467211	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	70467211	70467211	G	A	SNP	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	silent	c.2304	p.P768	0.203	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130				9	0	0	11	5	31.25
ITGB1BP2	0	genome.wustl.edu	37	X	70523125	70523125	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	70523125	70523125	C	A	SNP	ITGB1BP2	ENST00000373829	human	ensembl	74_37	+1	known	missense	c.331	p.L111M	0.013	NULL	pfam_CHORD,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	-	no_errors	ITGB1BP2	HGNC	ENSG00000147166				33	0	0	40	17	29.8246
TAF1	0	genome.wustl.edu	37	X	70674047	70674047	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	70674047	70674047	C	T	SNP	TAF1	ENST00000449580	human	ensembl	74_37	+1	known	missense	c.4778	p.A1593V	1.000	pirsf_TAF1_animal,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1	HGNC	ENSG00000147133				29	0	0	29	4	12.1212
ACRC	0	genome.wustl.edu	37	X	70823607	70823607	+	Silent	SNP	C	C	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	70823607	70823607	C	T	SNP	ACRC	ENST00000373695	human	ensembl	74_37	+1	known	silent	c.480	p.D160	0.358	NULL	pfam_SprT-like_domain,smart_SprT-like_domain	-	no_errors	ACRC	HGNC	ENSG00000147174				349	0	0	276	84	23.3333
CITED1	0	genome.wustl.edu	37	X	71521650	71521650	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	71521650	71521650	G	A	SNP	CITED1	ENST00000431381	human	ensembl	74_37	-1	known	nonsense	c.583	p.R195*	0.942	pfam_CITED	pfam_CITED	-	no_errors	CITED1	HGNC	ENSG00000125931				94	0	0	73	18	19.7802
XIST	0	genome.wustl.edu	37	X	73066246	73066246	+	RNA	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	73066246	73066246	A	G	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				75	0	0	52	18	25.7143
ABCB7	0	genome.wustl.edu	37	X	74296377	74296377	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	74296377	74296377	G	A	SNP	ABCB7	ENST00000253577	human	ensembl	74_37	-1	known	missense	c.569	p.A190V	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB7	HGNC	ENSG00000131269				110	0	0	110	22	16.6667
CYLC1	0	genome.wustl.edu	37	X	83129239	83129239	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	83129239	83129239	A	G	SNP	CYLC1	ENST00000329312	human	ensembl	74_37	+1	known	missense	c.1523	p.D508G	0.000	NULL	NULL	-	no_errors	CYLC1	HGNC	ENSG00000183035				31	0	0	28	13	31.7073
KLHL4	0	genome.wustl.edu	37	X	86877405	86877405	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	86877405	86877405	G	A	SNP	KLHL4	ENST00000373114	human	ensembl	74_37	+1	known	silent	c.1119	p.L373	0.998	pfam_BACK,smart_BACK	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL4	HGNC	ENSG00000102271				95	0	0	66	22	25
KLHL4	0	genome.wustl.edu	37	X	86890617	86890617	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	86890617	86890617	C	A	SNP	KLHL4	ENST00000373114	human	ensembl	74_37	+1	known	nonsense	c.1767	p.Y589*	0.815	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL4	HGNC	ENSG00000102271				36	0	0	36	7	16.2791
PCDH11X	0	genome.wustl.edu	37	X	91090524	91090524	+	Silent	SNP	G	G	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	91090524	91090524	G	A	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	silent	c.21	p.T7	0.561	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290				86	0	0	79	23	22.549
PCDH11X	0	genome.wustl.edu	37	X	91132050	91132050	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	91132050	91132050	C	A	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	missense	c.811	p.L271I	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290				59	0	0	46	16	25.8065
HIAT1	0	genome.wustl.edu	37	1	100534122	100534122	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	100534122	100534122	T	-	DEL	HIAT1	ENST00000370152	human	ensembl	74_37	+1	known	frame_shift_del	c.799	p.L269fs	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	HIAT1	HGNC	ENSG00000156875				93	0	0	64	16	20
COL11A1	0	genome.wustl.edu	37	1	103474066	103474067	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	103474066	103474067	-	C	INS	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	frame_shift_ins	c.1672_1671	p.P557fs	1.000:0.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				101	0	0	67	21	23.8636
ENSG00000272078	0	genome.wustl.edu	37	1	10707842	10707844	+	RNA	DEL	TCA	TCA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	TCA	TCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	10707842	10707844	TCA	-	DEL	ENSG00000272078	ENST00000606802	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998:0.998:0.908	-	-	-	no_errors	RP4-734G22.3	Clone_based_vega_gene	ENSG00000272078				75	0	0	45	17	27.4194
CLCC1	0	genome.wustl.edu	37	1	109479802	109479803	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	109479802	109479803	TC	-	DEL	CLCC1	ENST00000356970	human	ensembl	74_37	-1	known	frame_shift_del	c.1280_1279	p.D427fs	1.000:1.000	pfam_Chloride_chnl_CLIC-like	pfam_Chloride_chnl_CLIC-like	-	no_errors	CLCC1	HGNC	ENSG00000121940				98	0	0	63	21	25
EPS8L3	0	genome.wustl.edu	37	1	110300580	110300580	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	110300580	110300580	T	-	DEL	EPS8L3	ENST00000369805	human	ensembl	74_37	-1	known	frame_shift_del	c.821	p.N274fs	0.352	NULL	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L3	HGNC	ENSG00000198758				115	0	0	98	32	24.6154
RBM15	0	genome.wustl.edu	37	1	110882873	110882873	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	110882873	110882873	C	-	DEL	RBM15	ENST00000369784	human	ensembl	74_37	+1	known	frame_shift_del	c.846	p.P284fs	0.995	NULL	pfam_SPOC_C,pfam_RRM_dom,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	RBM15	HGNC	ENSG00000162775				159	1	0.625	165	51	23.6111
DCLRE1B	0	genome.wustl.edu	37	1	114448226	114448226	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	114448226	114448226	C	-	DEL	DCLRE1B	ENST00000369563	human	ensembl	74_37	+1	known	frame_shift_del	c.18	p.H8fs	0.987	NULL	pfam_DRMBL	-	no_errors	DCLRE1B	HGNC	ENSG00000118655				187	0	0	146	35	19.337
VANGL1	0	genome.wustl.edu	37	1	116206586	116206586	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	116206586	116206586	T	-	DEL	VANGL1	ENST00000310260	human	ensembl	74_37	+1	known	frame_shift_del	c.509	p.F172fs	0.981	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL1	HGNC	ENSG00000173218				136	1	0.729927	106	25	19.084
GDAP2	0	genome.wustl.edu	37	1	118413059	118413059	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	118413059	118413059	A	-	DEL	GDAP2	ENST00000491626	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GDAP2	HGNC	ENSG00000196505				16	0	0	20	8	28.5714
NOTCH2	0	genome.wustl.edu	37	1	120465221	120465221	+	RNA	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	120465221	120465221	C	-	DEL	NOTCH2	ENST00000493703	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NOTCH2	HGNC	ENSG00000134250				68	0	0	64	13	16.8831
BCL9	0	genome.wustl.edu	37	1	147096667	147096667	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	147096667	147096667	C	-	DEL	BCL9	ENST00000234739	human	ensembl	74_37	+1	known	frame_shift_del	c.4188	p.P1398fs	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128				48	0	0	40	9	18.3673
MTMR11	0	genome.wustl.edu	37	1	149900986	149900989	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	149900986	149900989	AAAA	-	DEL	MTMR11	ENST00000466496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.002:0.003:0.001	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				48	0	0	32	27	45.7627
ADAMTSL4	0	genome.wustl.edu	37	1	150526176	150526179	+	Frame_Shift_Del	DEL	CAGA	CAGA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CAGA	CAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	150526176	150526179	CAGA	-	DEL	ADAMTSL4	ENST00000369039	human	ensembl	74_37	+1	known	frame_shift_del	c.709_712	p.T238fs	0.053:0.085:0.291:0.634	pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL4	HGNC	ENSG00000143382				105	0	0	90	10	10
FLG	0	genome.wustl.edu	37	1	152286885	152286885	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	152286885	152286885	T	-	DEL	FLG	ENST00000368799	human	ensembl	74_37	-1	known	frame_shift_del	c.477	p.E160fs	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				54	0	0	57	16	21.9178
INTS3	0	genome.wustl.edu	37	1	153745768	153745768	+	RNA	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	153745768	153745768	C	-	DEL	INTS3	ENST00000476843	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.184	-	-	-	no_errors	INTS3	HGNC	ENSG00000143624				130	0	0	88	22	20
PYGO2	0	genome.wustl.edu	37	1	154932028	154932028	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	154932028	154932028	G	-	DEL	PYGO2	ENST00000368457	human	ensembl	74_37	-1	known	frame_shift_del	c.448	p.Q150fs	0.997	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PYGO2	HGNC	ENSG00000163348				99	0	0	65	18	21.6867
RUSC1	0	genome.wustl.edu	37	1	155292619	155292620	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	155292619	155292620	-	C	INS	RUSC1	ENST00000368352	human	ensembl	74_37	+1	known	frame_shift_ins	c.1055_1056	p.S355fs	0.996:0.949	NULL	pfam_Run,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC1	HGNC	ENSG00000160753				33	0	0	28	6	17.6471
TMEM79	0	genome.wustl.edu	37	1	156255497	156255498	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	156255497	156255498	-	C	INS	TMEM79	ENST00000295694	human	ensembl	74_37	+1	known	frame_shift_ins	c.480_481	p.R162fs	0.005:0.004	NULL	NULL	-	no_errors	TMEM79	HGNC	ENSG00000163472				90	0	0	58	19	24.6753
NES	0	genome.wustl.edu	37	1	156642804	156642804	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	156642804	156642804	G	-	DEL	NES	ENST00000368223	human	ensembl	74_37	-1	known	frame_shift_del	c.1176	p.T393fs	0.087	NULL	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688				193	0	0	124	51	29.1429
HDGF	0	genome.wustl.edu	37	1	156713430	156713430	+	RNA	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	156713430	156713430	G	-	DEL	HDGF	ENST00000477306	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	HDGF	HGNC	ENSG00000143321				35	0	0	33	10	23.2558
ARHGEF11	0	genome.wustl.edu	37	1	156914828	156914828	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	156914828	156914828	G	-	DEL	ARHGEF11	ENST00000368194	human	ensembl	74_37	-1	known	frame_shift_del	c.2974	p.L992fs	0.089	NULL	pfam_RGS-like_dom,pfam_DH-domain,pfam_PDZ,pfam_RGS_dom,superfamily_DH-domain,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_Regulat_G_prot_signal_superfam,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_DH-domain	-	no_errors	ARHGEF11	HGNC	ENSG00000132694				220	0	0	189	46	19.5745
EFHD2	0	genome.wustl.edu	37	1	15755214	15755217	+	Frame_Shift_Del	DEL	TAAG	TAAG	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	TAAG	TAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	15755214	15755217	TAAG	-	DEL	EFHD2	ENST00000375980	human	ensembl	74_37	+1	known	frame_shift_del	c.717_720	p.K240fs	1.000:1.000:1.000:1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFHD2	HGNC	ENSG00000142634				17	0	0	10	3	23.0769
OR10Z1	0	genome.wustl.edu	37	1	158576398	158576398	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	158576398	158576398	C	-	DEL	OR10Z1	ENST00000361284	human	ensembl	74_37	+1	known	frame_shift_del	c.170	p.M59fs	0.121	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Z1	HGNC	ENSG00000198967				228	0	0	249	65	20.7006
PAPPA2	0	genome.wustl.edu	37	1	176564479	176564479	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	176564479	176564479	G	-	DEL	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	frame_shift_del	c.1739	p.V581fs	1.000	superfamily_Notch_dom,smart_Notch_dom	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183				126	0	0	117	31	20.9459
DHX9	0	genome.wustl.edu	37	1	182853931	182853932	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	182853931	182853932	TA	-	DEL	DHX9	ENST00000367549	human	ensembl	74_37	+1	known	frame_shift_del	c.3444_3445	p.M1149fs	0.998:1.000	NULL	pfam_dsRNA-bd_dom,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_dsRNA-bd_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom	-	no_errors	DHX9	HGNC	ENSG00000135829				82	0	0	91	26	22.2222
GABRD	0	genome.wustl.edu	37	1	1961598	1961598	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	1961598	1961598	G	-	DEL	GABRD	ENST00000378585	human	ensembl	74_37	+1	known	frame_shift_del	c.1236	p.G414fs	0.000	superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAd_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRD	HGNC	ENSG00000187730				125	0	0	95	21	18.1034
DDX59	0	genome.wustl.edu	37	1	200594042	200594042	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	200594042	200594042	T	-	DEL	DDX59	ENST00000447706	human	ensembl	74_37	-1	known	frame_shift_del	c.1730	p.N577fs	0.001	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197				30	0	0	20	14	41.1765
CR2	0	genome.wustl.edu	37	1	207642044	207642044	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	207642044	207642044	C	-	DEL	CR2	ENST00000367057	human	ensembl	74_37	+1	known	frame_shift_del	c.618	p.T209fs	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322				114	0	0	83	51	38.0597
EPRS	0	genome.wustl.edu	37	1	220162105	220162105	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	220162105	220162105	T	-	DEL	EPRS	ENST00000366923	human	ensembl	74_37	-1	known	frame_shift_del	c.2602	p.T868fs	1.000	pfam_WHEP-TRS,superfamily_S15_NS1_RNA-bd,pfscan_WHEP-TRS	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,pfam_WHEP-TRS,pfam_Glu/Gln-tRNA-synth_Ib_codon-bd,pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Pro-tRNA_ligase_II_C,pfam_Anticodon-bd,superfamily_Ribosomal_L25/Gln-tRNA_synth,superfamily_Anticodon-bd,superfamily_Pro-tRNA_synth_II,superfamily_S15_NS1_RNA-bd,superfamily_Glutathione-S-Trfase_C-like,smart_Pro-tRNA_ligase_II_C,prints_Glu/Gln-tRNA-synth,prints_Pro-tRNA-ligase_IIa,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_Pro-tRNA-ligase_IIa_arc-type,tigrfam_Glu-tRNA-synth_arc/euk	-	no_errors	EPRS	HGNC	ENSG00000136628				80	0	0	76	20	20.8333
CAPN2	0	genome.wustl.edu	37	1	223945119	223945120	+	RNA	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	223945119	223945120	-	A	INS	CAPN2	ENST00000480581	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	CAPN2	HGNC	ENSG00000162909				99	0	0	86	20	18.8679
GALNT2	0	genome.wustl.edu	37	1	230386205	230386205	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	230386205	230386205	C	-	DEL	GALNT2	ENST00000366672	human	ensembl	74_37	+1	known	frame_shift_del	c.908	p.M305fs	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT2	HGNC	ENSG00000143641				37	0	0	27	9	25
ARV1	0	genome.wustl.edu	37	1	231131566	231131567	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	231131566	231131567	-	A	INS	ARV1	ENST00000310256	human	ensembl	74_37	+1	known	frame_shift_ins	c.509_510	p.K174fs	0.000:0.000	pfam_Arv1	pfam_Arv1	-	no_errors	ARV1	HGNC	ENSG00000173409				49	0	0	51	6	10.5263
TARBP1	0	genome.wustl.edu	37	1	234527272	234527272	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	234527272	234527272	T	-	DEL	TARBP1	ENST00000462259	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	TARBP1	HGNC	ENSG00000059588				14	0	0	16	4	20
TMEM50A	0	genome.wustl.edu	37	1	25669452	25669452	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	25669452	25669452	T	-	DEL	TMEM50A	ENST00000374358	human	ensembl	74_37	+1	known	frame_shift_del	c.94	p.F33fs	1.000	pfam_UPF0220	pfam_UPF0220	-	no_errors	TMEM50A	HGNC	ENSG00000183726				35	0	0	22	5	18.5185
CATSPER4	0	genome.wustl.edu	37	1	26529010	26529010	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	26529010	26529010	A	-	DEL	CATSPER4	ENST00000456354	human	ensembl	74_37	+1	known	frame_shift_del	c.1396	p.K467fs	0.001	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER4	HGNC	ENSG00000188782				19	0	0	14	6	30
ARID1A	0	genome.wustl.edu	37	1	27105931	27105931	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	27105931	27105931	G	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.5542	p.D1850fs	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				133	0	0	120	39	24.5283
WDTC1	0	genome.wustl.edu	37	1	27621108	27621108	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	27621108	27621108	G	-	DEL	WDTC1	ENST00000319394	human	ensembl	74_37	+1	known	frame_shift_del	c.861	p.E290fs	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784				47	0	0	34	10	22.7273
SERINC2	0	genome.wustl.edu	37	1	31905967	31905969	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	31905967	31905969	CTT	-	DEL	SERINC2	ENST00000373710	human	ensembl	74_37	+1	known	in_frame_del	c.1194_1196	p.F400in_frame_del	1.000:1.000:1.000	pfam_TMS_TDE	pfam_TMS_TDE	-	no_errors	SERINC2	HGNC	ENSG00000168528				143	0	0	78	20	20.4082
BAI2	0	genome.wustl.edu	37	1	32201169	32201169	+	RNA	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	32201169	32201169	C	-	DEL	BAI2	ENST00000465256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.865	-	-	-	no_errors	BAI2	HGNC	ENSG00000121753				35	0	0	31	10	24.3902
GNL2	0	genome.wustl.edu	37	1	38032473	38032474	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	38032473	38032474	-	T	INS	GNL2	ENST00000373062	human	ensembl	74_37	-1	known	frame_shift_ins	c.2179_2178	p.F726fs	0.928:0.913	NULL	pfam_NOG2_N_dom,pfam_GTP_binding_domain,superfamily_P-loop_NTPase,prints_GTP_binding_domain	-	no_errors	GNL2	HGNC	ENSG00000134697				166	0	0	132	30	18.5185
ZNF684	0	genome.wustl.edu	37	1	41012528	41012528	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	41012528	41012528	A	-	DEL	ZNF684	ENST00000372699	human	ensembl	74_37	+1	known	frame_shift_del	c.533	p.N180fs	0.106	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF684	HGNC	ENSG00000117010				48	0	0	44	10	18.5185
PIK3R3	0	genome.wustl.edu	37	1	46521525	46521525	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	46521525	46521525	T	-	DEL	PIK3R3	ENST00000540385	human	ensembl	74_37	-1	known	frame_shift_del	c.1021	p.M341fs	1.000	prints_PI3kinase_P85	pfam_SH2,smart_SH2,pfscan_SH2,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R3	HGNC	ENSG00000117461				107	0	0	81	23	22.1154
UQCRH	0	genome.wustl.edu	37	1	46775803	46775804	+	RNA	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	46775803	46775804	-	T	INS	UQCRH	ENST00000460947	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.102:0.024	-	-	-	no_errors	UQCRH	HGNC	ENSG00000173660				40	0	0	46	12	20.6897
ZFYVE9	0	genome.wustl.edu	37	1	52705024	52705025	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	52705024	52705025	-	G	INS	ZFYVE9	ENST00000287727	human	ensembl	74_37	+1	known	frame_shift_ins	c.1935_1936	p.E646fs	1.000:1.000	pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_SARA_Smad-bd,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE9	HGNC	ENSG00000157077				93	0	0	97	28	22.4
ZCCHC11	0	genome.wustl.edu	37	1	52991403	52991403	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	52991403	52991403	T	-	DEL	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	frame_shift_del	c.550	p.I184fs	0.196	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744				105	1	0.943396	110	32	22.5352
ZCCHC11	0	genome.wustl.edu	37	1	52991779	52991780	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	52991779	52991780	-	T	INS	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	frame_shift_ins	c.174_173	p.N58fs	1.000:0.998	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744				29	0	0	29	4	12.1212
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251				23	0	0	22	6	21.4286
DOCK7	0	genome.wustl.edu	37	1	62941169	62941170	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	62941169	62941170	AA	-	DEL	DOCK7	ENST00000467758	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DOCK7	HGNC	ENSG00000116641				10	0	0	3	3	50
ALG6	0	genome.wustl.edu	37	1	63836751	63836751	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	63836751	63836751	A	-	DEL	ALG6	ENST00000487136	human	ensembl	74_37	+1	known	frame_shift_del	c.103	p.T38fs	0.000	NULL	NULL	-	no_errors	ALG6	HGNC	ENSG00000088035				42	0	0	34	10	22.7273
NEXN	0	genome.wustl.edu	37	1	78392424	78392424	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	78392424	78392424	A	-	DEL	NEXN	ENST00000334785	human	ensembl	74_37	+1	known	frame_shift_del	c.711	p.E240fs	0.000	NULL	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	NEXN	HGNC	ENSG00000162614				87	0	0	60	15	20
DNAJB4	0	genome.wustl.edu	37	1	78481820	78481820	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	78481820	78481820	A	-	DEL	DNAJB4	ENST00000370763	human	ensembl	74_37	+1	known	frame_shift_del	c.903	p.N303fs	0.996	pfam_DnaJ_C,superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB4	HGNC	ENSG00000162616				50	0	0	68	7	9.33333
RERE	0	genome.wustl.edu	37	1	8420318	8420318	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	8420318	8420318	C	-	DEL	RERE	ENST00000337907	human	ensembl	74_37	-1	known	frame_shift_del	c.3249	p.S1084fs	0.000	pfam_Atrophin-like	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599				13	0	0	5	3	37.5
MTF2	0	genome.wustl.edu	37	1	93599279	93599280	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	93599279	93599280	-	A	INS	MTF2	ENST00000370298	human	ensembl	74_37	+1	known	frame_shift_ins	c.1180_1181	p.G397fs	1.000:0.994	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MTF2	HGNC	ENSG00000143033				47	0	0	43	15	25.8621
CCDC18	0	genome.wustl.edu	37	1	93720077	93720077	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	93720077	93720077	A	-	DEL	CCDC18	ENST00000557479	human	ensembl	74_37	+1	known	frame_shift_del	c.3602	p.E1203fs	1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483				44	0	0	42	13	23.6364
ABCD3	0	genome.wustl.edu	37	1	94982785	94982785	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	1	94982785	94982785	A	-	DEL	ABCD3	ENST00000464165	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ABCD3	HGNC	ENSG00000117528				15	0	0	6	9	60
FAM178A	0	genome.wustl.edu	37	10	102684424	102684424	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	102684424	102684424	C	-	DEL	FAM178A	ENST00000370269	human	ensembl	74_37	+1	known	frame_shift_del	c.1666	p.P557fs	1.000	NULL	NULL	-	no_errors	FAM178A	HGNC	ENSG00000119906				115	0	0	105	33	23.913
C10orf2	0	genome.wustl.edu	37	10	102748601	102748601	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	102748601	102748601	G	-	DEL	C10orf2	ENST00000311916	human	ensembl	74_37	+1	known	frame_shift_del	c.634	p.G213fs	0.007	NULL	pfam_Circ_KaiC/RadA,pfam_DNA_helicase_DnaB-like_C,superfamily_P-loop_NTPase,pfscan_DNA_helicase_DnaB-like_C	-	no_errors	C10orf2	HGNC	ENSG00000107815				68	0	0	56	15	21.1268
PPRC1	0	genome.wustl.edu	37	10	103901158	103901158	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	103901158	103901158	C	-	DEL	PPRC1	ENST00000278070	human	ensembl	74_37	+1	known	frame_shift_del	c.2893	p.P966fs	0.994	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPRC1	HGNC	ENSG00000148840				102	0	0	80	18	18.3673
PITX3	0	genome.wustl.edu	37	10	103991384	103991386	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	103991384	103991386	CTC	-	DEL	PITX3	ENST00000370002	human	ensembl	74_37	-1	known	in_frame_del	c.282_280	p.E94in_frame_del	1.000:1.000:1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PITX3	HGNC	ENSG00000107859				36	0	0	27	8	22.8571
TDRD1	0	genome.wustl.edu	37	10	115970683	115970683	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	115970683	115970683	T	-	DEL	TDRD1	ENST00000251864	human	ensembl	74_37	+1	known	frame_shift_del	c.1617	p.Y541fs	0.103	pfam_Tudor,pfscan_Tudor	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627				44	0	0	61	21	25.6098
GPR158	0	genome.wustl.edu	37	10	25887977	25887977	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	25887977	25887977	A	-	DEL	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	frame_shift_del	c.3422	p.K1143fs	0.054	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025				72	0	0	53	12	18.4615
ANKRD26	0	genome.wustl.edu	37	10	27295869	27295869	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	27295869	27295869	T	-	DEL	ANKRD26	ENST00000436985	human	ensembl	74_37	-1	known	frame_shift_del	c.5024	p.N1675fs	0.007	NULL	pfam_DUF3496,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Polyketide_synth_docking,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD26	HGNC	ENSG00000107890				91	0	0	118	27	18.6207
KIAA1462	0	genome.wustl.edu	37	10	30336501	30336501	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	30336501	30336501	C	-	DEL	KIAA1462	ENST00000375377	human	ensembl	74_37	-1	known	frame_shift_del	c.241	p.E81fs	0.031	NULL	NULL	-	no_errors	KIAA1462	HGNC	ENSG00000165757				93	0	0	69	21	23.3333
ARHGAP12	0	genome.wustl.edu	37	10	32096466	32096466	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	32096466	32096466	A	-	DEL	ARHGAP12	ENST00000492028	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.771	-	-	-	no_errors	ARHGAP12	HGNC	ENSG00000165322				8	0	0	4	5	55.5556
BMS1	0	genome.wustl.edu	37	10	43294048	43294048	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	43294048	43294048	C	-	DEL	BMS1	ENST00000374518	human	ensembl	74_37	+1	known	frame_shift_del	c.2222	p.H743fs	0.871	superfamily_P-loop_NTPase	pfam_BMS1_TSR1_C,pfam_AARP2CN,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AARP2CN	-	no_errors	BMS1	HGNC	ENSG00000165733				107	0	0	94	17	15.3153
GDF10	0	genome.wustl.edu	37	10	48438646	48438647	+	In_Frame_Ins	INS	-	-	GCA			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	48438646	48438647	-	GCA	INS	GDF10	ENST00000224605	human	ensembl	74_37	-1	known	in_frame_ins	c.65_64	p.22in_frame_insL	0.000:0.001	pirsf_BMP3/GDF10	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,pirsf_BMP3/GDF10	-	no_errors	GDF10	HGNC	ENSG00000107623				17	0	0	10	5	33.3333
TFAM	0	genome.wustl.edu	37	10	60148570	60148571	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	60148570	60148571	AA	-	DEL	TFAM	ENST00000487519	human	ensembl	74_37	+1	known	frame_shift_del	c.432_433	p.K147fs	0.006:0.936	superfamily_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TFAM	HGNC	ENSG00000108064				63	0	0	65	12	15.5844
ANK3	0	genome.wustl.edu	37	10	61834216	61834217	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	61834216	61834217	-	G	INS	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	frame_shift_ins	c.6423_6422	p.Q2142fs	0.182:1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				106	0	0	111	35	23.9726
HERC4	0	genome.wustl.edu	37	10	69716603	69716605	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	69716603	69716605	AAA	-	DEL	HERC4	ENST00000480158	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	HERC4	HGNC	ENSG00000148634				30	0	0	19	16	45.7143
DDX50	0	genome.wustl.edu	37	10	70670981	70670982	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	70670981	70670982	-	A	INS	DDX50	ENST00000373585	human	ensembl	74_37	+1	known	frame_shift_ins	c.618_619	p.S208fs	0.972:0.998	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_GUCT,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX50	HGNC	ENSG00000107625				86	0	0	94	23	19.6581
SEC24C	0	genome.wustl.edu	37	10	75525559	75525560	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	75525559	75525560	-	C	INS	SEC24C	ENST00000339365	human	ensembl	74_37	+1	known	frame_shift_ins	c.1368_1369	p.Q458fs	1.000:1.000	pfam_Znf_Sec23_Sec24,superfamily_Znf_Sec23_Sec24	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24C	HGNC	ENSG00000176986				162	0	0	126	43	25.4438
LARP4B	0	genome.wustl.edu	37	10	890939	890939	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	890939	890939	T	-	DEL	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	frame_shift_del	c.487	p.T163fs	1.000	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				40	0	0	38	10	20.8333
ZNF518A	0	genome.wustl.edu	37	10	97918856	97918856	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	97918856	97918856	A	-	DEL	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.867	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853				45	0	0	46	13	22.0339
ZNF518A	0	genome.wustl.edu	37	10	97920369	97920369	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	10	97920369	97920369	A	-	DEL	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853				32	0	0	31	11	26.1905
MMP10	0	genome.wustl.edu	37	11	102650395	102650395	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	102650395	102650395	T	-	DEL	MMP10	ENST00000279441	human	ensembl	74_37	-1	known	frame_shift_del	c.187	p.I63fs	1.000	pirsf_Pept_M10A_Metazoans,pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP10	HGNC	ENSG00000166670				25	0	0	29	9	23.6842
CASP5	0	genome.wustl.edu	37	11	104878041	104878042	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	104878041	104878042	TT	-	DEL	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	frame_shift_del	c.241_240	p.K80fs	0.000:0.000	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pirsf_Caspase_IL-1_beta,pfscan_CARD	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757				34	0	0	40	18	31.0345
REXO2	0	genome.wustl.edu	37	11	114320750	114320750	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	114320750	114320750	T	-	DEL	REXO2	ENST00000544507	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	REXO2	HGNC	ENSG00000076043				62	0	0	49	16	24.6154
CEP164	0	genome.wustl.edu	37	11	117267846	117267846	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	117267846	117267846	G	-	DEL	CEP164	ENST00000278935	human	ensembl	74_37	+1	known	frame_shift_del	c.3318	p.V1108fs	0.984	NULL	superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	CEP164	HGNC	ENSG00000110274				78	0	0	49	15	23.4375
PKNOX2	0	genome.wustl.edu	37	11	125301354	125301354	+	RNA	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	125301354	125301354	G	-	DEL	PKNOX2	ENST00000530517	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.181	-	-	-	no_errors	PKNOX2	HGNC	ENSG00000165495				39	0	0	37	7	15.9091
RRAS2	0	genome.wustl.edu	37	11	14317413	14317414	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	14317413	14317414	-	A	INS	RRAS2	ENST00000545643	human	ensembl	74_37	-1	known	frame_shift_ins	c.115_114	p.L38fs	0.195:0.126	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RRAS2	HGNC	ENSG00000133818				50	0	0	47	17	26.5625
BRSK2	0	genome.wustl.edu	37	11	1477640	1477640	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	1477640	1477640	G	-	DEL	BRSK2	ENST00000382179	human	ensembl	74_37	+1	known	frame_shift_del	c.1869	p.P626fs	0.882	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BRSK2	HGNC	ENSG00000174672				17	0	0	23	5	17.8571
BRSK2	0	genome.wustl.edu	37	11	1478187	1478187	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	1478187	1478187	C	-	DEL	BRSK2	ENST00000308230	human	ensembl	74_37	+1	known	frame_shift_del	c.2008	p.P672fs	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BRSK2	HGNC	ENSG00000174672				46	0	0	31	12	27.907
KRTAP5-5	0	genome.wustl.edu	37	11	1651467	1651467	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	1651467	1651467	G	-	DEL	KRTAP5-5	ENST00000399676	human	ensembl	74_37	+1	known	frame_shift_del	c.397	p.S135fs	1.000	NULL	NULL	-	no_errors	KRTAP5-5	HGNC	ENSG00000185940				79	0	0	89	9	9.18367
PAX6	0	genome.wustl.edu	37	11	31812317	31812317	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	31812317	31812317	G	-	DEL	PAX6	ENST00000379107	human	ensembl	74_37	-1	known	frame_shift_del	c.1166	p.P389fs	1.000	NULL	pfam_Paired_dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,prints_Paired_dom,pfscan_Homeobox_dom,pfscan_Paired_dom	-	no_errors	PAX6	HGNC	ENSG00000007372				95	0	0	54	20	27.027
RAG2	0	genome.wustl.edu	37	11	36614223	36614223	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	36614223	36614223	T	-	DEL	RAG2	ENST00000311485	human	ensembl	74_37	-1	known	frame_shift_del	c.1496	p.K499fs	0.997	pfam_RAG2	pfam_RAG2,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_Znf_FYVE_PHD	-	no_errors	RAG2	HGNC	ENSG00000175097				84	0	0	72	23	24.2105
HNRNPKP3	0	genome.wustl.edu	37	11	43283606	43283608	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	43283606	43283608	AAA	-	DEL	HNRNPKP3	ENST00000511537	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986:0.995:0.998	-	-	-	no_errors	HNRNPKP3	HGNC	ENSG00000251557				10	0	0	7	4	36.3636
KBTBD4	0	genome.wustl.edu	37	11	47597166	47597167	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	47597166	47597167	CT	-	DEL	KBTBD4	ENST00000430070	human	ensembl	74_37	-1	known	frame_shift_del	c.723_722	p.E241fs	1.000:1.000	pfam_BACK,smart_BACK	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	KBTBD4	HGNC	ENSG00000123444				67	0	0	64	19	22.8916
OR4C13	0	genome.wustl.edu	37	11	49974149	49974149	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	49974149	49974149	T	-	DEL	OR4C13	ENST00000555099	human	ensembl	74_37	+1	known	frame_shift_del	c.175	p.F60fs	0.991	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C13	HGNC	ENSG00000258817				222	0	0	227	57	20.0704
TRIM51HP	0	genome.wustl.edu	37	11	55065032	55065032	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	55065032	55065032	T	-	DEL	TRIM51HP	ENST00000526016	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.010	-	-	-	no_errors	TRIM51HP	HGNC	ENSG00000166007				43	0	0	28	14	33.3333
UBQLN3	0	genome.wustl.edu	37	11	5529402	5529402	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	5529402	5529402	A	-	DEL	UBQLN3	ENST00000311659	human	ensembl	74_37	-1	known	frame_shift_del	c.1387	p.S463fs	0.000	NULL	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN3	HGNC	ENSG00000175520				95	0	0	75	17	18.4783
TRIM6-TRIM34	0	genome.wustl.edu	37	11	5653606	5653607	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	5653606	5653607	-	C	INS	TRIM6-TRIM34	ENST00000354852	human	ensembl	74_37	+1	known	frame_shift_ins	c.1107_1108	p.I370fs	0.981:0.984	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM6-TRIM34	HGNC	ENSG00000258588				131	0	0	156	23	12.8492
TNKS1BP1	0	genome.wustl.edu	37	11	57087895	57087895	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	57087895	57087895	G	-	DEL	TNKS1BP1	ENST00000358252	human	ensembl	74_37	-1	known	frame_shift_del	c.386	p.P129fs	0.045	NULL	NULL	-	no_errors	TNKS1BP1	HGNC	ENSG00000149115				77	0	0	54	13	19.403
GIF	0	genome.wustl.edu	37	11	59603317	59603319	+	In_Frame_Del	DEL	ACA	ACA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	ACA	ACA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	59603317	59603319	ACA	-	DEL	GIF	ENST00000257248	human	ensembl	74_37	-1	known	in_frame_del	c.1037_1035	p.V346in_frame_del	0.984:0.960:0.130	NULL	pfam_Cbl-bd_transpt_euk	-	no_errors	GIF	HGNC	ENSG00000134812				144	0	0	128	43	25.1462
ROM1	0	genome.wustl.edu	37	11	62381084	62381084	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	62381084	62381084	G	-	DEL	ROM1	ENST00000278833	human	ensembl	74_37	+1	known	frame_shift_del	c.331	p.L114fs	0.023	pfam_Tetraspanin/Peripherin,prints_Peripherin/rom-1	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Peripherin/rom-1	-	no_errors	ROM1	HGNC	ENSG00000149489				66	0	0	36	7	16.2791
SF1	0	genome.wustl.edu	37	11	64537024	64537024	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	64537024	64537024	C	-	DEL	SF1	ENST00000377390	human	ensembl	74_37	-1	known	frame_shift_del	c.537	p.S182fs	0.488	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_KH_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_KH_dom_type_1	-	no_errors	SF1	HGNC	ENSG00000168066				224	0	0	224	31	12.1569
MEN1	0	genome.wustl.edu	37	11	64572093	64572093	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	64572093	64572093	G	-	DEL	MEN1	ENST00000337652	human	ensembl	74_37	-1	known	frame_shift_del	c.1561	p.R521fs	0.999	pfam_Menin	pfam_Menin	-	no_errors	MEN1	HGNC	ENSG00000133895				44	0	0	24	7	22.5806
SPDYC	0	genome.wustl.edu	37	11	64938885	64938885	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	64938885	64938885	G	-	DEL	SPDYC	ENST00000377185	human	ensembl	74_37	+1	known	frame_shift_del	c.114	p.G40fs	0.007	NULL	pfam_Cell_cycle_regulatory_Spy1	-	no_errors	SPDYC	HGNC	ENSG00000204710				72	0	0	85	13	13.2653
MALAT1	0	genome.wustl.edu	37	11	65268696	65268696	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	65268696	65268696	T	-	DEL	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.048	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				43	0	0	28	4	12.5
RAD9A	0	genome.wustl.edu	37	11	67163284	67163286	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	67163284	67163286	GAG	-	DEL	RAD9A	ENST00000307980	human	ensembl	74_37	+1	known	in_frame_del	c.547_549	p.E185in_frame_del	1.000:1.000:0.998	pfam_Rad9/Ddc1,pirsf_Rad9	pfam_Rad9/Ddc1,pirsf_Rad9	-	no_errors	RAD9A	HGNC	ENSG00000172613				81	0	0	38	11	22.449
CCDC90B	0	genome.wustl.edu	37	11	82984771	82984771	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	82984771	82984771	A	-	DEL	CCDC90B	ENST00000529073	human	ensembl	74_37	-1	putative	frame_shift_del	c.479	p.L160fs	0.846	pfam_DUF1640	pfam_DUF1640	-	no_errors	CCDC90B	HGNC	ENSG00000137500				21	0	0	18	14	43.75
CTSC	0	genome.wustl.edu	37	11	88068108	88068108	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	88068108	88068108	A	-	DEL	CTSC	ENST00000227266	human	ensembl	74_37	-1	known	frame_shift_del	c.315	p.F105fs	1.000	pfam_CathepsinC_exc	pfam_Peptidase_C1A_C,pfam_CathepsinC_exc,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSC	HGNC	ENSG00000109861				29	0	0	40	16	28.5714
FOLH1B	0	genome.wustl.edu	37	11	89392887	89392888	+	RNA	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	89392887	89392888	-	A	INS	FOLH1B	ENST00000525540	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	FOLH1B	HGNC	ENSG00000134612				52	0	0	43	7	14
SCARNA9	0	genome.wustl.edu	37	11	93454921	93454921	+	RNA	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	93454921	93454921	G	-	DEL	SCARNA9	ENST00000530422	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	SCARNA9	HGNC	ENSG00000254911				19	0	0	20	11	35.4839
MTMR2	0	genome.wustl.edu	37	11	95595157	95595157	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	11	95595157	95595157	T	-	DEL	MTMR2	ENST00000346299	human	ensembl	74_37	-1	known	frame_shift_del	c.467	p.K156fs	1.000	NULL	pfam_Myotubularin-like_Pase_dom,pfam_GRAM,smart_GRAM,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR2	HGNC	ENSG00000087053				14	0	0	20	5	20
ANKS1B	0	genome.wustl.edu	37	12	100166681	100166682	+	RNA	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	100166681	100166682	-	C	INS	ANKS1B	ENST00000552472	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	ANKS1B	HGNC	ENSG00000185046				33	0	0	48	10	17.2414
CHPT1	0	genome.wustl.edu	37	12	102108338	102108338	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	102108338	102108338	T	-	DEL	CHPT1	ENST00000229266	human	ensembl	74_37	+1	known	frame_shift_del	c.478	p.F162fs	0.989	pfam_CDP-OH_P_trans,pirsf_CHOPT	pfam_CDP-OH_P_trans,pirsf_CHOPT	-	no_errors	CHPT1	HGNC	ENSG00000111666				41	0	0	46	8	14.8148
HSP90B1	0	genome.wustl.edu	37	12	104335305	104335305	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	104335305	104335305	A	-	DEL	HSP90B1	ENST00000299767	human	ensembl	74_37	+1	known	frame_shift_del	c.1210	p.K405fs	1.000	pirsf_Hsp90_fam,pfam_Hsp90_fam,superfamily_Ribosomal_S5_D2-typ_fold	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90B1	HGNC	ENSG00000166598				68	0	0	62	9	12.6761
BTBD11	0	genome.wustl.edu	37	12	107937778	107937778	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	107937778	107937778	C	-	DEL	BTBD11	ENST00000280758	human	ensembl	74_37	+1	known	frame_shift_del	c.1352	p.L453fs	1.000	NULL	pfam_Ankyrin_rpt,pfam_BTB_POZ,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,superfamily_Histone-fold,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like	-	no_errors	BTBD11	HGNC	ENSG00000151136				67	0	0	45	10	18.1818
SSH1	0	genome.wustl.edu	37	12	109185940	109185940	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	109185940	109185940	A	-	DEL	SSH1	ENST00000326470	human	ensembl	74_37	-1	known	frame_shift_del	c.2048	p.F683fs	0.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH1	HGNC	ENSG00000084112				11	0	0	14	3	17.6471
TAS2R10	0	genome.wustl.edu	37	12	10978282	10978282	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	10978282	10978282	A	-	DEL	TAS2R10	ENST00000240619	human	ensembl	74_37	-1	known	frame_shift_del	c.587	p.L196fs	0.009	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R10	HGNC	ENSG00000121318				65	0	0	41	15	26.7857
MVK	0	genome.wustl.edu	37	12	110019240	110019240	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	110019240	110019240	C	-	DEL	MVK	ENST00000228510	human	ensembl	74_37	+1	known	frame_shift_del	c.412	p.A141fs	1.000	pfam_GHMP_kinase_N_dom,superfamily_Ribosomal_S5_D2-typ_fold,prints_Mevalonate/galactokinase,prints_Galkinase,tigrfam_Mev_gal_kin	pfam_GHMP_kinase_N_dom,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,prints_Mevalonate/galactokinase,prints_Galkinase,tigrfam_Mev_gal_kin	-	no_errors	MVK	HGNC	ENSG00000110921				139	0	0	94	25	21.0084
MED13L	0	genome.wustl.edu	37	12	116408550	116408550	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	116408550	116408550	A	-	DEL	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	frame_shift_del	c.5916	p.F1972fs	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066				33	0	0	37	13	26
ERC1	0	genome.wustl.edu	37	12	1192553	1192553	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	1192553	1192553	A	-	DEL	ERC1	ENST00000360905	human	ensembl	74_37	+1	known	frame_shift_del	c.893	p.K299fs	1.000	pfam_CAZ_cplx_RIM-bd_prot	pfam_CAZ_cplx_RIM-bd_prot,pfam_Rab-bd_FIP-RBD,superfamily_Prefoldin	-	no_errors	ERC1	HGNC	ENSG00000082805				62	0	0	70	22	23.913
RNF10	0	genome.wustl.edu	37	12	121014514	121014514	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	121014514	121014514	T	-	DEL	RNF10	ENST00000535470	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	RNF10	HGNC	ENSG00000022840				66	0	0	78	16	17.0213
HNF1A	0	genome.wustl.edu	37	12	121432118	121432118	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	121432118	121432118	C	-	DEL	HNF1A	ENST00000257555	human	ensembl	74_37	+1	known	frame_shift_del	c.865	p.P291fs	1.000	pfam_HNF1b_C	pfam_HNF1b_C,pfam_HNF-1_N,pfam_HNF1a_C,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100				20	0	0	8	6	42.8571
ATP6V0A2	0	genome.wustl.edu	37	12	124218472	124218472	+	Splice_Site	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	124218472	124218472	G	-	DEL	ATP6V0A2	ENST00000330342	human	ensembl	74_37	+1	known	splice_site_del	c.649-1	e7-1	1.000	-	-	-	no_errors	ATP6V0A2	HGNC	ENSG00000185344				63	0	0	61	14	18.6667
ATF7IP	0	genome.wustl.edu	37	12	14613959	14613960	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	14613959	14613960	CT	-	DEL	ATF7IP	ENST00000261168	human	ensembl	74_37	+1	known	frame_shift_del	c.2689_2690	p.Y898fs	1.000:1.000	NULL	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	ATF7IP	HGNC	ENSG00000171681				38	0	0	52	10	16.129
GUCY2C	0	genome.wustl.edu	37	12	14832594	14832594	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	14832594	14832594	A	-	DEL	GUCY2C	ENST00000261170	human	ensembl	74_37	-1	known	frame_shift_del	c.827	p.F276fs	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_A/G_cyclase,superfamily_Peripla_BP_I,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019				46	0	0	53	22	29.3333
GUCY2C	0	genome.wustl.edu	37	12	14840939	14840939	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	14840939	14840939	T	-	DEL	GUCY2C	ENST00000261170	human	ensembl	74_37	-1	known	frame_shift_del	c.276	p.G93fs	0.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_A/G_cyclase,superfamily_Peripla_BP_I,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019				71	0	0	59	21	26.25
EPS8	0	genome.wustl.edu	37	12	15811510	15811510	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	15811510	15811510	A	-	DEL	EPS8	ENST00000281172	human	ensembl	74_37	-1	known	frame_shift_del	c.947	p.L316fs	1.000	NULL	pfam_PTB,pfam_SH3_domain,pfam_PTB/PI_dom,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTB/PI_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8	HGNC	ENSG00000151491				76	0	0	100	27	21.2598
KIAA1551	0	genome.wustl.edu	37	12	32133955	32133955	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	32133955	32133955	T	-	DEL	KIAA1551	ENST00000312561	human	ensembl	74_37	+1	known	frame_shift_del	c.66	p.L24fs	0.013	NULL	NULL	-	no_errors	KIAA1551	HGNC	ENSG00000174718				83	0	0	77	20	20.6186
PRMT8	0	genome.wustl.edu	37	12	3649780	3649780	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	3649780	3649780	C	-	DEL	PRMT8	ENST00000382622	human	ensembl	74_37	+1	known	frame_shift_del	c.84	p.S31fs	0.358	NULL	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT8	HGNC	ENSG00000111218				106	0	0	87	23	20.9091
KIF21A	0	genome.wustl.edu	37	12	39733972	39733972	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	39733972	39733972	T	-	DEL	KIF21A	ENST00000395670	human	ensembl	74_37	-1	known	frame_shift_del	c.2305	p.T769fs	1.000	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,superfamily_ARM-type_fold,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21A	HGNC	ENSG00000139116				14	0	0	23	5	17.8571
KDM5A	0	genome.wustl.edu	37	12	416953	416953	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	416953	416953	T	-	DEL	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	frame_shift_del	c.3597	p.G1200fs	0.987	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614				72	0	0	65	20	23.5294
RAD51AP1	0	genome.wustl.edu	37	12	4653063	4653063	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	4653063	4653063	A	-	DEL	RAD51AP1	ENST00000228843	human	ensembl	74_37	+1	known	frame_shift_del	c.202	p.R70fs	0.997	NULL	NULL	-	no_errors	RAD51AP1	HGNC	ENSG00000111247				42	0	0	41	15	26.7857
KMT2D	0	genome.wustl.edu	37	12	49436954	49436954	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	49436954	49436954	C	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.5549	p.G1850fs	0.581	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				42	0	0	39	8	17.0213
ZNF740	0	genome.wustl.edu	37	12	53579255	53579255	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	53579255	53579255	A	-	DEL	ZNF740	ENST00000416904	human	ensembl	74_37	+1	known	frame_shift_del	c.244	p.K83fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF740	HGNC	ENSG00000139651				37	0	0	27	4	12.9032
ITGA7	0	genome.wustl.edu	37	12	56092271	56092271	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	56092271	56092271	C	-	DEL	ITGA7	ENST00000555728	human	ensembl	74_37	-1	known	frame_shift_del	c.1220	p.G407fs	1.000	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA7	HGNC	ENSG00000135424				107	0	0	79	27	25.4717
RPL41	0	genome.wustl.edu	37	12	56510435	56510435	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	56510435	56510435	T	-	DEL	RPL41	ENST00000358888	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL41	HGNC	ENSG00000229117				50	0	0	46	7	13.2075
STAT2	0	genome.wustl.edu	37	12	56744034	56744034	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	56744034	56744034	A	-	DEL	STAT2	ENST00000557252	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040	-	-	-	no_errors	STAT2	HGNC	ENSG00000170581				39	0	0	36	15	29.4118
LRP1	0	genome.wustl.edu	37	12	57572242	57572242	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	57572242	57572242	G	-	DEL	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	frame_shift_del	c.4462	p.E1490fs	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				125	0	0	112	7	5.88235
GLI1	0	genome.wustl.edu	37	12	57864218	57864218	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	57864218	57864218	C	-	DEL	GLI1	ENST00000228682	human	ensembl	74_37	+1	known	frame_shift_del	c.1695	p.P567fs	0.998	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI1	HGNC	ENSG00000111087				150	0	0	108	29	21.1679
MBD6	0	genome.wustl.edu	37	12	57921002	57921002	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	57921002	57921002	C	-	DEL	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_del	c.2074	p.Q694fs	0.764	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987				9	0	0	7	5	41.6667
MBD6	0	genome.wustl.edu	37	12	57921732	57921732	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	57921732	57921732	G	-	DEL	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_del	c.2338	p.G782fs	1.000	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987				99	0	0	51	24	32
NUP107	0	genome.wustl.edu	37	12	69126366	69126366	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	69126366	69126366	A	-	DEL	NUP107	ENST00000401003	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NUP107	HGNC	ENSG00000111581				14	0	0	2	5	71.4286
CD4	0	genome.wustl.edu	37	12	6924043	6924043	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	6924043	6924043	G	-	DEL	CD4	ENST00000011653	human	ensembl	74_37	+1	known	frame_shift_del	c.492	p.K167fs	0.000	pfam_Ig_C2-set,smart_Ig_sub,smart_Ig_sub2	pfam_CD4-extracel,pfam_Ig_C2-set,pfam_Tcell_CD4_Cterm,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_I-set,pfam_NK_rcpt_2B4_Ig_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Ag_CD4	-	no_errors	CD4	HGNC	ENSG00000010610				94	0	0	83	21	20.1923
BEST3	0	genome.wustl.edu	37	12	70070713	70070715	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	70070713	70070715	AGA	-	DEL	BEST3	ENST00000330891	human	ensembl	74_37	-1	known	in_frame_del	c.850_848	p.F283in_frame_del	1.000:1.000:1.000	pfam_Bestrophin/UPF0187	pfam_Bestrophin/UPF0187	-	no_errors	BEST3	HGNC	ENSG00000127325				177	1	0.561798	147	19	11.4458
CNOT2	0	genome.wustl.edu	37	12	70747694	70747704	+	Frame_Shift_Del	DEL	AAAAAAAAAAA	AAAAAAAAAAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAAAAAAAAAA	AAAAAAAAAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	70747694	70747704	AAAAAAAAAAA	-	DEL	CNOT2	ENST00000229195	human	ensembl	74_37	+1	known	frame_shift_del	c.1622_1623	p.*541fs	0.996:0.996	NULL	pfam_NOT	-	no_errors	CNOT2	HGNC	ENSG00000111596				26	0	0	47	8	14.5455
BBS10	0	genome.wustl.edu	37	12	76740799	76740801	+	In_Frame_Del	DEL	ATA	ATA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	ATA	ATA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	76740799	76740801	ATA	-	DEL	BBS10	ENST00000393262	human	ensembl	74_37	-1	known	in_frame_del	c.966_964	p.Y322in_frame_del	1.000:1.000:1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	-	no_errors	BBS10	HGNC	ENSG00000179941				38	0	0	45	11	19.6429
NANOG	0	genome.wustl.edu	37	12	7945649	7945649	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	7945649	7945649	A	-	DEL	NANOG	ENST00000229307	human	ensembl	74_37	+1	known	frame_shift_del	c.255	p.K87fs	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NANOG	HGNC	ENSG00000111704				105	0	0	100	19	15.9664
CLEC4A	0	genome.wustl.edu	37	12	8281890	8281890	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	8281890	8281890	A	-	DEL	CLEC4A	ENST00000229332	human	ensembl	74_37	+1	known	frame_shift_del	c.230	p.K79fs	0.284	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CLEC4A	HGNC	ENSG00000111729				48	0	0	29	5	14.7059
TMTC2	0	genome.wustl.edu	37	12	83444731	83444732	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	83444731	83444732	-	A	INS	TMTC2	ENST00000321196	human	ensembl	74_37	+1	known	frame_shift_ins	c.2201_2202	p.A737fs	1.000:1.000	pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_TPR-4,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC2	HGNC	ENSG00000179104				38	0	0	32	8	20
CEP290	0	genome.wustl.edu	37	12	88453675	88453675	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	88453675	88453675	T	-	DEL	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	frame_shift_del	c.6651	p.E2218fs	0.999	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707				13	0	0	24	4	14.2857
CEP290	0	genome.wustl.edu	37	12	88487680	88487681	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	12	88487680	88487681	-	T	INS	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	frame_shift_ins	c.3182_3181	p.I1061fs	1.000:1.000	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707				23	0	0	22	7	24.1379
GAS6	0	genome.wustl.edu	37	13	114542743	114542745	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	114542743	114542745	AGA	-	DEL	GAS6	ENST00000357389	human	ensembl	74_37	-1	known	in_frame_del	c.424_422	p.F141in_frame_del	1.000:0.919:0.902	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	GAS6	HGNC	ENSG00000183087				172	0	0	121	77	38.8889
AMER2	0	genome.wustl.edu	37	13	25744119	25744119	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	25744119	25744119	G	-	DEL	AMER2	ENST00000515384	human	ensembl	74_37	-1	known	frame_shift_del	c.1639	p.R547fs	0.980	pfam_Uncharacterised_FAM123	pfam_Uncharacterised_FAM123	-	no_errors	AMER2	HGNC	ENSG00000165566				68	0	0	64	42	39.6226
SLC46A3	0	genome.wustl.edu	37	13	29275609	29275609	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	29275609	29275609	T	-	DEL	SLC46A3	ENST00000475385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SLC46A3	HGNC	ENSG00000139508				29	0	0	31	17	35.4167
SLC46A3	0	genome.wustl.edu	37	13	29278265	29278265	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	29278265	29278265	A	-	DEL	SLC46A3	ENST00000475385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC46A3	HGNC	ENSG00000139508				43	0	0	29	29	50
DCLK1	0	genome.wustl.edu	37	13	36445442	36445442	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	36445442	36445442	T	-	DEL	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	frame_shift_del	c.859	p.I287fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083				177	0	0	173	38	18.0095
SPG20	0	genome.wustl.edu	37	13	36886628	36886628	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	36886628	36886628	A	-	DEL	SPG20	ENST00000491805	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SPG20	HGNC	ENSG00000133104				44	0	0	48	30	38.4615
FREM2	0	genome.wustl.edu	37	13	39357245	39357247	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	39357245	39357247	GAA	-	DEL	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	in_frame_del	c.5680_5682	p.E1895in_frame_del	1.000:1.000:1.000	pfam_Calx_beta,smart_Calx_beta	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893				113	0	0	99	45	31.25
GTF2F2	0	genome.wustl.edu	37	13	45781540	45781540	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	45781540	45781540	T	-	DEL	GTF2F2	ENST00000494087	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GTF2F2	HGNC	ENSG00000188342				16	0	0	21	7	25
MED4-AS1	0	genome.wustl.edu	37	13	48651454	48651454	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	48651454	48651454	A	-	DEL	MED4-AS1	ENST00000422483	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MED4-AS1	HGNC	ENSG00000229111				22	0	0	24	5	17.2414
LPAR6	0	genome.wustl.edu	37	13	48986150	48986153	+	Frame_Shift_Del	DEL	CAAA	CAAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CAAA	CAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	48986150	48986153	CAAA	-	DEL	LPAR6	ENST00000345941	human	ensembl	74_37	-1	known	frame_shift_del	c.410_407	p.V136fs	1.000:1.000:0.348:0.980	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	LPAR6	HGNC	ENSG00000139679				25	0	0	27	5	15.625
TDRD3	0	genome.wustl.edu	37	13	61102848	61102848	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	61102848	61102848	A	-	DEL	TDRD3	ENST00000535286	human	ensembl	74_37	+1	known	frame_shift_del	c.1489	p.R499fs	1.000	NULL	pfam_DUF1767,pfam_Tudor,pfam_Survival_motor_neuron,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,smart_Tudor,pfscan_Tudor,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TDRD3	HGNC	ENSG00000083544				76	0	0	80	43	34.9593
PCDH20	0	genome.wustl.edu	37	13	61987885	61987885	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	61987885	61987885	G	-	DEL	PCDH20	ENST00000409186	human	ensembl	74_37	-1	known	frame_shift_del	c.347	p.P116fs	0.967	pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH20	HGNC	ENSG00000197991				40	0	0	39	6	13.3333
PIBF1	0	genome.wustl.edu	37	13	73357634	73357634	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	73357634	73357634	A	-	DEL	PIBF1	ENST00000326291	human	ensembl	74_37	+1	known	frame_shift_del	c.27	p.V12fs	0.060	NULL	superfamily_t-SNARE	-	no_errors	PIBF1	HGNC	ENSG00000083535				77	0	0	87	22	20.1835
RBM26	0	genome.wustl.edu	37	13	79918807	79918807	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	13	79918807	79918807	T	-	DEL	RBM26	ENST00000438724	human	ensembl	74_37	-1	known	frame_shift_del	c.2109	p.K703fs	1.000	NULL	pfam_PWI_dom,superfamily_PWI_dom,smart_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM26	HGNC	ENSG00000139746				34	0	0	31	18	36.7347
MIR543	0	genome.wustl.edu	37	14	101498390	101498390	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	101498390	101498390	T	-	DEL	MIR543	ENST00000390751	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR543	HGNC	ENSG00000212040				27	0	0	22	8	26.6667
INF2	0	genome.wustl.edu	37	14	105174185	105174185	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	105174185	105174185	C	-	DEL	INF2	ENST00000392634	human	ensembl	74_37	+1	known	frame_shift_del	c.1581	p.V530fs	0.011	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485				35	0	0	17	7	29.1667
ARHGAP5	0	genome.wustl.edu	37	14	32561326	32561326	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	32561326	32561326	A	-	DEL	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	frame_shift_del	c.1451	p.A486fs	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852				78	0	0	83	18	17.8218
ARHGAP5	0	genome.wustl.edu	37	14	32562544	32562545	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	32562544	32562545	-	T	INS	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	frame_shift_ins	c.2669_2670	p.E893fs	1.000:0.999	NULL	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852				48	0	0	38	7	15.5556
CTAGE5	0	genome.wustl.edu	37	14	39746243	39746243	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	39746243	39746243	T	-	DEL	CTAGE5	ENST00000396158	human	ensembl	74_37	+1	known	frame_shift_del	c.169	p.L59fs	0.000	NULL	NULL	-	no_errors	CTAGE5	HGNC	ENSG00000150527				41	0	0	54	9	14.2857
TRIM9	0	genome.wustl.edu	37	14	51446192	51446192	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	51446192	51446192	A	-	DEL	TRIM9	ENST00000338969	human	ensembl	74_37	-1	known	frame_shift_del	c.2226	p.F742fs	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Fibronectin_type3,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM9	HGNC	ENSG00000100505				260	0	0	203	63	23.6842
DDHD1	0	genome.wustl.edu	37	14	53619422	53619422	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	53619422	53619422	C	-	DEL	DDHD1	ENST00000323669	human	ensembl	74_37	-1	known	frame_shift_del	c.395	p.G132fs	0.957	NULL	pfam_DDHD,pfscan_DDHD	-	no_errors	DDHD1	HGNC	ENSG00000100523				26	0	0	14	4	22.2222
TMEM260	0	genome.wustl.edu	37	14	57052612	57052612	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	57052612	57052612	T	-	DEL	TMEM260	ENST00000261556	human	ensembl	74_37	+1	known	frame_shift_del	c.326	p.F111fs	1.000	pfam_DUF2723	pfam_DUF2723	-	no_errors	TMEM260	HGNC	ENSG00000070269				94	0	0	84	17	16.8317
KCNH5	0	genome.wustl.edu	37	14	63174302	63174303	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	63174302	63174303	-	G	INS	KCNH5	ENST00000322893	human	ensembl	74_37	-1	known	frame_shift_ins	c.2891_2890	p.Q964fs	1.000:1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH5	HGNC	ENSG00000140015				159	0	0	194	38	16.3793
ELMSAN1	0	genome.wustl.edu	37	14	74205773	74205773	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	74205773	74205773	G	-	DEL	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	frame_shift_del	c.939	p.N314fs	0.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030				27	0	0	13	16	55.1724
RPS6KA5	0	genome.wustl.edu	37	14	91369281	91369281	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	91369281	91369281	T	-	DEL	RPS6KA5	ENST00000261991	human	ensembl	74_37	-1	known	frame_shift_del	c.990	p.V331fs	1.000	superfamily_Kinase-like_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Aminoglycoside_PTrfase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_AGC-kinase_C,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA5	HGNC	ENSG00000100784				62	0	0	73	15	17.0455
GPR68	0	genome.wustl.edu	37	14	91700911	91700913	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	91700911	91700913	CCT	-	DEL	GPR68	ENST00000238699	human	ensembl	74_37	-1	known	in_frame_del	c.514_512	p.E171in_frame_del	1.000:1.000:1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_OGR1_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_OGR1_rcpt,prints_GPCR_Rhodpsn,prints_Psych_rcpt	-	no_errors	GPR68	HGNC	ENSG00000119714				52	0	0	43	10	18.8679
ATG2B	0	genome.wustl.edu	37	14	96788614	96788614	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	14	96788614	96788614	A	-	DEL	ATG2B	ENST00000488421	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATG2B	HGNC	ENSG00000066739				51	0	0	28	9	24.3243
MAGEL2	0	genome.wustl.edu	37	15	23890894	23890894	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	23890894	23890894	G	-	DEL	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	frame_shift_del	c.187	p.Q63fs	0.990	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585				42	0	0	9	5	35.7143
PGBD4	0	genome.wustl.edu	37	15	34395204	34395204	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	34395204	34395204	T	-	DEL	PGBD4	ENST00000397766	human	ensembl	74_37	+1	known	frame_shift_del	c.472	p.F159fs	0.078	NULL	NULL	-	no_errors	PGBD4	HGNC	ENSG00000182405				59	0	0	68	19	21.8391
THBS1	0	genome.wustl.edu	37	15	39874929	39874929	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	39874929	39874929	G	-	DEL	THBS1	ENST00000260356	human	ensembl	74_37	+1	known	frame_shift_del	c.603	p.G203fs	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801				56	0	0	40	14	25.9259
CDAN1	0	genome.wustl.edu	37	15	43019890	43019890	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	43019890	43019890	C	-	DEL	CDAN1	ENST00000356231	human	ensembl	74_37	-1	known	frame_shift_del	c.3025	p.E1009fs	1.000	NULL	NULL	-	no_errors	CDAN1	HGNC	ENSG00000140326				37	0	0	29	4	12.1212
UBR1	0	genome.wustl.edu	37	15	43252855	43252855	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	43252855	43252855	T	-	DEL	UBR1	ENST00000290650	human	ensembl	74_37	-1	known	frame_shift_del	c.4745	p.N1582fs	0.838	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR1	HGNC	ENSG00000159459				58	0	0	41	6	12.766
TP53BP1	0	genome.wustl.edu	37	15	43748661	43748661	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	43748661	43748661	T	-	DEL	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	frame_shift_del	c.2145	p.E716fs	0.002	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369				102	0	0	90	30	25
MAP1A	0	genome.wustl.edu	37	15	43819227	43819227	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	43819227	43819227	C	-	DEL	MAP1A	ENST00000399453	human	ensembl	74_37	+1	known	frame_shift_del	c.5556	p.P1854fs	0.993	NULL	NULL	-	no_errors	MAP1A	HGNC	ENSG00000166963				45	0	0	32	9	21.9512
COPS2	0	genome.wustl.edu	37	15	49426681	49426682	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	49426681	49426682	-	T	INS	COPS2	ENST00000299259	human	ensembl	74_37	-1	known	frame_shift_ins	c.592_591	p.G197fs	1.000:0.999	smart_PAM	pfam_PCI_dom,smart_PAM,smart_PCI_dom	-	no_errors	COPS2	HGNC	ENSG00000166200				33	0	0	33	9	21.4286
LACTB	0	genome.wustl.edu	37	15	63414111	63414111	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	63414111	63414111	C	-	DEL	LACTB	ENST00000261893	human	ensembl	74_37	+1	known	frame_shift_del	c.41	p.G17fs	0.107	NULL	pfam_Beta-lactam-related,superfamily_Beta-lactam/transpept-like	-	no_errors	LACTB	HGNC	ENSG00000103642				13	0	0	13	5	27.7778
TIPIN	0	genome.wustl.edu	37	15	66672095	66672095	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	66672095	66672095	T	-	DEL	TIPIN	ENST00000561773	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	TIPIN	HGNC	ENSG00000075131				48	0	0	41	9	18
ENSG00000259426	0	genome.wustl.edu	37	15	69689782	69689783	+	RNA	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	69689782	69689783	-	C	INS	ENSG00000259426	ENST00000558617	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.103:0.004	-	-	-	no_errors	RP11-253M7.1	Clone_based_vega_gene	ENSG00000259426				66	0	0	45	17	27.4194
ISLR2	0	genome.wustl.edu	37	15	74425630	74425631	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	74425630	74425631	TA	-	DEL	ISLR2	ENST00000361742	human	ensembl	74_37	+1	known	frame_shift_del	c.535_536	p.Y179fs	1.000:1.000	NULL	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Ig-like_dom	-	no_errors	ISLR2	HGNC	ENSG00000167178				193	0	0	147	38	20.5405
SIN3A	0	genome.wustl.edu	37	15	75704021	75704021	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	75704021	75704021	A	-	DEL	SIN3A	ENST00000360439	human	ensembl	74_37	-1	known	frame_shift_del	c.820	p.S274fs	1.000	NULL	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3A	HGNC	ENSG00000169375				158	0	0	229	33	12.5954
SCAPER	0	genome.wustl.edu	37	15	76958026	76958026	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	76958026	76958026	T	-	DEL	SCAPER	ENST00000324767	human	ensembl	74_37	-1	known	frame_shift_del	c.2613	p.A872fs	0.998	NULL	smart_Znf_U1	-	no_errors	SCAPER	HGNC	ENSG00000140386				15	0	0	8	4	33.3333
KIAA1199	0	genome.wustl.edu	37	15	81173394	81173394	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	81173394	81173394	T	-	DEL	KIAA1199	ENST00000220244	human	ensembl	74_37	+1	known	frame_shift_del	c.534	p.F180fs	0.993	NULL	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	KIAA1199	HGNC	ENSG00000103888				131	0	0	172	39	18.4834
ALPK3	0	genome.wustl.edu	37	15	85400502	85400502	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	85400502	85400502	G	-	DEL	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	frame_shift_del	c.3139	p.G1048fs	0.003	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383				37	0	0	50	7	12.2807
MAN2A2	0	genome.wustl.edu	37	15	91453427	91453429	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	15	91453427	91453429	CTC	-	DEL	MAN2A2	ENST00000360468	human	ensembl	74_37	+1	known	in_frame_del	c.1482_1484	p.S495in_frame_del	1.000:1.000:1.000	pfam_Glyco_hydro_38_N,superfamily_Glyco_hydro/deAcase_b/a-brl	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2A2	HGNC	ENSG00000196547				132	0	0	116	20	14.7059
TMEM204	0	genome.wustl.edu	37	16	1604942	1604942	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	1604942	1604942	C	-	DEL	TMEM204	ENST00000253934	human	ensembl	74_37	+1	known	frame_shift_del	c.596	p.R201fs	0.995	NULL	NULL	-	no_errors	TMEM204	HGNC	ENSG00000131634				42	0	0	30	10	25
KNOP1	0	genome.wustl.edu	37	16	19722724	19722724	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	19722724	19722724	T	-	DEL	KNOP1	ENST00000219837	human	ensembl	74_37	-1	known	frame_shift_del	c.957	p.G320fs	0.536	NULL	NULL	-	no_errors	KNOP1	HGNC	ENSG00000103550				145	1	0.684932	125	32	20.3822
UMOD	0	genome.wustl.edu	37	16	20352437	20352438	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	20352437	20352438	-	G	INS	UMOD	ENST00000424589	human	ensembl	74_37	-1	known	frame_shift_ins	c.1652_1651	p.L551fs	0.389:0.073	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	pfam_ZP_dom,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_ZP_dom,pfscan_EG-like_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	UMOD	HGNC	ENSG00000169344				39	0	0	36	11	23.4043
USP31	0	genome.wustl.edu	37	16	23117810	23117811	+	Splice_Site	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	23117810	23117811	-	A	INS	USP31	ENST00000219689	human	ensembl	74_37	-1	known	splice_site_ins	c.772-3_772-2	e3-2	1.000:0.941	-	-	-	no_errors	USP31	HGNC	ENSG00000103404				17	0	0	17	4	19.0476
ATP2A1	0	genome.wustl.edu	37	16	28913640	28913640	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	28913640	28913640	C	-	DEL	ATP2A1	ENST00000357084	human	ensembl	74_37	+1	known	frame_shift_del	c.2457	p.R822fs	0.957	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A1	HGNC	ENSG00000196296				153	1	0.649351	136	29	17.5758
ZNF48	0	genome.wustl.edu	37	16	30409298	30409299	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	30409298	30409299	-	G	INS	ZNF48	ENST00000320159	human	ensembl	74_37	+1	known	frame_shift_ins	c.727_728	p.E245fs	0.249:0.150	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF48	HGNC	ENSG00000180035				107	0	0	55	20	26.6667
CREBBP	0	genome.wustl.edu	37	16	3817720	3817721	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	3817720	3817721	-	T	INS	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	frame_shift_ins	c.3251_3250	p.I1084fs	1.000:1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339				64	0	0	80	15	15.7895
SEPT12	0	genome.wustl.edu	37	16	4829702	4829702	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	4829702	4829702	C	-	DEL	SEPT12	ENST00000268231	human	ensembl	74_37	-1	known	frame_shift_del	c.812	p.G271fs	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_AIG1,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT12	HGNC	ENSG00000140623				207	0	0	190	34	15.1786
SALL1	0	genome.wustl.edu	37	16	51175644	51175646	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	51175644	51175646	GCC	-	DEL	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	in_frame_del	c.489_487	p.G163in_frame_del	0.994:0.989:0.878	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449				68	0	0	58	15	20.5479
MT4	0	genome.wustl.edu	37	16	56602769	56602769	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	56602769	56602769	C	-	DEL	MT4	ENST00000219162	human	ensembl	74_37	+1	known	frame_shift_del	c.114	p.P40fs	1.000	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	-	no_errors	MT4	HGNC	ENSG00000102891				250	0	0	224	53	19.1336
GPR114	0	genome.wustl.edu	37	16	57600566	57600566	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	57600566	57600566	G	-	DEL	GPR114	ENST00000340339	human	ensembl	74_37	+1	known	frame_shift_del	c.602	p.G203fs	0.995	pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_orphan_rcpt_GPR56	-	no_errors	GPR114	HGNC	ENSG00000159618				111	0	0	96	28	22.5806
CDH8	0	genome.wustl.edu	37	16	61747819	61747819	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	61747819	61747819	T	-	DEL	CDH8	ENST00000577390	human	ensembl	74_37	-1	known	frame_shift_del	c.1580	p.N527fs	0.995	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH8	HGNC	ENSG00000150394				65	0	0	37	15	28.8462
FAM65A	0	genome.wustl.edu	37	16	67576619	67576620	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	67576619	67576620	-	C	INS	FAM65A	ENST00000422602	human	ensembl	74_37	+1	known	frame_shift_ins	c.1990_1991	p.S666fs	0.005:0.007	NULL	superfamily_ARM-type_fold,superfamily_HR1_rho-bd	-	no_errors	FAM65A	HGNC	ENSG00000039523				383	2	0.519481	244	72	22.7848
WDR90	0	genome.wustl.edu	37	16	709105	709106	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	709105	709106	-	C	INS	WDR90	ENST00000549091	human	ensembl	74_37	+1	novel	frame_shift_ins	c.3031_3032	p.A1014fs	0.000:0.000	NULL	pfam_WD40_repeat,pfam_DUF667,pfam_Nucleoporin_Nup160,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR90	HGNC	ENSG00000161996				127	0	0	99	16	13.913
CHST4	0	genome.wustl.edu	37	16	71570593	71570593	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	71570593	71570593	A	-	DEL	CHST4	ENST00000338482	human	ensembl	74_37	+1	known	frame_shift_del	c.13	p.M7fs	0.000	pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST4	HGNC	ENSG00000140835				76	0	0	81	28	25.6881
BCAR1	0	genome.wustl.edu	37	16	75271108	75271108	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	75271108	75271108	C	-	DEL	BCAR1	ENST00000418647	human	ensembl	74_37	-1	known	frame_shift_del	c.906	p.L303fs	0.427	prints_SH3_domain	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	BCAR1	HGNC	ENSG00000050820				17	0	0	10	5	33.3333
TAF1C	0	genome.wustl.edu	37	16	84213650	84213651	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	84213650	84213651	-	G	INS	TAF1C	ENST00000378541	human	ensembl	74_37	-1	known	frame_shift_ins	c.1601_1600	p.Q534fs	0.999:0.998	NULL	superfamily_WD40_repeat_dom	-	no_errors	TAF1C	HGNC	ENSG00000103168				54	0	0	45	10	18.1818
ZDHHC7	0	genome.wustl.edu	37	16	85010039	85010039	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	85010039	85010039	G	-	DEL	ZDHHC7	ENST00000344861	human	ensembl	74_37	-1	known	frame_shift_del	c.948	p.S317fs	0.902	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC7	HGNC	ENSG00000153786				90	0	0	60	18	23.0769
ANKRD11	0	genome.wustl.edu	37	16	89347320	89347320	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	16	89347320	89347320	G	-	DEL	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	frame_shift_del	c.5630	p.P1877fs	0.085	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522				135	0	0	88	24	21.4286
MYH3	0	genome.wustl.edu	37	17	10533463	10533464	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	10533463	10533464	CT	-	DEL	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	frame_shift_del	c.5508_5507	p.E1836fs	0.998:1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063				349	0	0	303	55	15.3631
CRK	0	genome.wustl.edu	37	17	1326755	1326758	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	1326755	1326758	AAAA	-	DEL	CRK	ENST00000572145	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.352:0.023:0.010:0.011	-	-	-	no_errors	CRK	HGNC	ENSG00000167193				32	0	0	32	11	25.5814
FLCN	0	genome.wustl.edu	37	17	17119709	17119709	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	17119709	17119709	G	-	DEL	FLCN	ENST00000285071	human	ensembl	74_37	-1	known	frame_shift_del	c.1285	p.H429fs	1.000	NULL	pfam_Folliculin	-	no_errors	FLCN	HGNC	ENSG00000154803				49	0	0	25	12	32.4324
SPECC1	0	genome.wustl.edu	37	17	20108263	20108263	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	20108263	20108263	A	-	DEL	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	frame_shift_del	c.901	p.N303fs	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487				117	0	0	115	33	22.2973
NLK	0	genome.wustl.edu	37	17	26449740	26449740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	26449740	26449740	T	-	DEL	NLK	ENST00000407008	human	ensembl	74_37	+1	known	frame_shift_del	c.570	p.F192fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NLK	HGNC	ENSG00000087095				57	0	0	60	13	17.8082
SPAG5-AS1	0	genome.wustl.edu	37	17	26943781	26943782	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	26943781	26943782	AA	-	DEL	SPAG5-AS1	ENST00000414744	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SPAG5-AS1	HGNC	ENSG00000227543				45	0	0	59	19	24.359
SUPT6H	0	genome.wustl.edu	37	17	27002006	27002006	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	27002006	27002006	A	-	DEL	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	frame_shift_del	c.364	p.M124fs	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				64	0	0	51	18	26.087
ATAD5	0	genome.wustl.edu	37	17	29161693	29161693	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	29161693	29161693	A	-	DEL	ATAD5	ENST00000321990	human	ensembl	74_37	+1	known	frame_shift_del	c.594	p.N200fs	0.999	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD5	HGNC	ENSG00000176208				141	0	0	108	40	27.027
CDK5R1	0	genome.wustl.edu	37	17	30815147	30815147	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	30815147	30815147	C	-	DEL	CDK5R1	ENST00000313401	human	ensembl	74_37	+1	known	frame_shift_del	c.509	p.T172fs	1.000	pfam_CDK5_activator,superfamily_Cyclin-like,pirsf_CDK5_activator	pfam_CDK5_activator,superfamily_Cyclin-like,pirsf_CDK5_activator	-	no_errors	CDK5R1	HGNC	ENSG00000176749				88	0	0	73	24	24.7423
OR1A2	0	genome.wustl.edu	37	17	3101552	3101552	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	3101552	3101552	T	-	DEL	OR1A2	ENST00000381951	human	ensembl	74_37	+1	known	frame_shift_del	c.740	p.L249fs	0.029	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1A2	HGNC	ENSG00000172150				102	0	0	102	34	25
LIG3	0	genome.wustl.edu	37	17	33310486	33310486	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	33310486	33310486	A	-	DEL	LIG3	ENST00000378526	human	ensembl	74_37	+1	known	frame_shift_del	c.462	p.I157fs	1.000	pfam_Znf_PARP,pfscan_Znf_PARP	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_Znf_PARP,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG3	HGNC	ENSG00000005156				41	0	0	41	7	14.5833
P2RX1	0	genome.wustl.edu	37	17	3819462	3819462	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	3819462	3819462	G	-	DEL	P2RX1	ENST00000225538	human	ensembl	74_37	-1	known	frame_shift_del	c.58	p.R20fs	0.997	pfam_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X1_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX1	HGNC	ENSG00000108405				177	0	0	130	32	19.7531
MSL1	0	genome.wustl.edu	37	17	38285573	38285573	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	38285573	38285573	A	-	DEL	MSL1	ENST00000398532	human	ensembl	74_37	+1	known	frame_shift_del	c.1068	p.T358fs	1.000	NULL	NULL	-	no_errors	MSL1	HGNC	ENSG00000188895				82	0	0	85	34	28.5714
KAT2A	0	genome.wustl.edu	37	17	40271408	40271408	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	40271408	40271408	G	-	DEL	KAT2A	ENST00000225916	human	ensembl	74_37	-1	known	frame_shift_del	c.928	p.R310fs	1.000	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom,prints_Bromodomain	-	no_errors	KAT2A	HGNC	ENSG00000108773				190	0	0	129	28	17.8344
UBTF	0	genome.wustl.edu	37	17	42293014	42293014	+	RNA	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	42293014	42293014	C	-	DEL	UBTF	ENST00000537550	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.153	-	-	-	no_errors	UBTF	HGNC	ENSG00000108312				128	0	0	93	19	16.9643
FZD2	0	genome.wustl.edu	37	17	42635401	42635402	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	42635401	42635402	GC	-	DEL	FZD2	ENST00000315323	human	ensembl	74_37	+1	known	frame_shift_del	c.345_346	p.R118fs	1.000:1.000	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD2	HGNC	ENSG00000180340				137	0	0	113	22	16.2963
GP1BA	0	genome.wustl.edu	37	17	4837373	4837373	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	4837373	4837373	A	-	DEL	GP1BA	ENST00000329125	human	ensembl	74_37	+1	known	frame_shift_del	c.1474	p.T494fs	0.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	GP1BA	HGNC	ENSG00000185245				119	0	0	76	14	15.5556
CAMTA2	0	genome.wustl.edu	37	17	4883808	4883808	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	4883808	4883808	G	-	DEL	CAMTA2	ENST00000414043	human	ensembl	74_37	-1	known	frame_shift_del	c.878	p.P293fs	0.997	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA2	HGNC	ENSG00000108509				89	0	0	111	16	12.5984
USP32	0	genome.wustl.edu	37	17	58262903	58262903	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	58262903	58262903	T	-	DEL	USP32	ENST00000300896	human	ensembl	74_37	-1	known	frame_shift_del	c.3752	p.N1251fs	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,smart_EF_hand_dom,smart_Pept_C19_DUSP,pfscan_EF_hand_dom,pfscan_Peptidase_C19/C67,prints_Recoverin	-	no_errors	USP32	HGNC	ENSG00000170832				113	0	0	99	31	23.8462
ACE	0	genome.wustl.edu	37	17	61560426	61560426	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	61560426	61560426	A	-	DEL	ACE	ENST00000290866	human	ensembl	74_37	+1	known	frame_shift_del	c.1379	p.I462fs	1.000	pfam_Peptidase_M2	pfam_Peptidase_M2,prints_Peptidase_M2	-	no_errors	ACE	HGNC	ENSG00000159640				205	0	0	149	44	22.7979
CCDC47	0	genome.wustl.edu	37	17	61838688	61838690	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	61838688	61838690	CTT	-	DEL	CCDC47	ENST00000225726	human	ensembl	74_37	-1	known	in_frame_del	c.571_569	p.E190in_frame_del	1.000:1.000:1.000	pfam_DUF1682	pfam_DUF1682	-	no_errors	CCDC47	HGNC	ENSG00000108588				182	0	0	178	37	17.2093
SCN4A	0	genome.wustl.edu	37	17	62049987	62049987	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	62049987	62049987	G	-	DEL	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	frame_shift_del	c.215	p.P72fs	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314				20	0	0	16	6	27.2727
SLC16A6	0	genome.wustl.edu	37	17	66270150	66270150	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	66270150	66270150	C	-	DEL	SLC16A6	ENST00000327268	human	ensembl	74_37	-1	known	frame_shift_del	c.294	p.L99fs	0.006	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A6	HGNC	ENSG00000108932				50	0	0	64	16	20
SDK2	0	genome.wustl.edu	37	17	71394282	71394282	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	71394282	71394282	G	-	DEL	SDK2	ENST00000392650	human	ensembl	74_37	-1	known	frame_shift_del	c.3246	p.S1083fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK2	HGNC	ENSG00000069188				63	0	0	42	10	19.2308
BTBD17	0	genome.wustl.edu	37	17	72353616	72353616	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	72353616	72353616	C	-	DEL	BTBD17	ENST00000375366	human	ensembl	74_37	-1	known	frame_shift_del	c.617	p.G206fs	0.026	pfam_BACK,smart_BACK	pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD17	HGNC	ENSG00000204347				20	0	0	14	7	33.3333
TMEM102	0	genome.wustl.edu	37	17	7340807	7340807	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	7340807	7340807	G	-	DEL	TMEM102	ENST00000323206	human	ensembl	74_37	+1	known	frame_shift_del	c.1509	p.G505fs	0.997	NULL	NULL	-	no_errors	TMEM102	HGNC	ENSG00000181284				10	0	0	3	3	50
CASKIN2	0	genome.wustl.edu	37	17	73498972	73498973	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	73498972	73498973	-	G	INS	CASKIN2	ENST00000321617	human	ensembl	74_37	-1	known	frame_shift_ins	c.2183_2182	p.Q728fs	0.990:0.992	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_SH3_domain,prints_Ankyrin_rpt	-	no_errors	CASKIN2	HGNC	ENSG00000177303				39	0	0	30	4	11.7647
TNFSF13	0	genome.wustl.edu	37	17	7462459	7462460	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	7462459	7462460	-	G	INS	TNFSF13	ENST00000338784	human	ensembl	74_37	+1	known	frame_shift_ins	c.103_104	p.A37fs	1.000:1.000	NULL	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	-	no_errors	TNFSF13	HGNC	ENSG00000161955				42	0	0	50	14	21.875
PGS1	0	genome.wustl.edu	37	17	76415788	76415788	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	76415788	76415788	T	-	DEL	PGS1	ENST00000588281	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PGS1	HGNC	ENSG00000087157				62	0	0	53	12	18.4615
CHD3	0	genome.wustl.edu	37	17	7798765	7798765	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	7798765	7798765	C	-	DEL	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	frame_shift_del	c.1612	p.R540fs	0.007	superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				115	0	0	91	33	26.6129
RNF213	0	genome.wustl.edu	37	17	78263597	78263597	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	78263597	78263597	A	-	DEL	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	frame_shift_del	c.1073	p.N360fs	0.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821				31	0	0	27	9	25
GPS1	0	genome.wustl.edu	37	17	80010158	80010158	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	17	80010158	80010158	G	-	DEL	GPS1	ENST00000578392	human	ensembl	74_37	+1	known	frame_shift_del	c.60	p.G22fs	0.849	NULL	NULL	-	no_errors	GPS1	HGNC	ENSG00000169727				38	0	0	32	6	15.7895
RBBP8	0	genome.wustl.edu	37	18	20572853	20572853	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	20572853	20572853	A	-	DEL	RBBP8	ENST00000327155	human	ensembl	74_37	+1	known	frame_shift_del	c.1063	p.K357fs	0.002	NULL	pfam_CtIP_N,pfam_DNA-repair_Sae2/CtIP	-	no_errors	RBBP8	HGNC	ENSG00000101773				76	0	0	64	19	22.8916
ENSG00000252258	0	genome.wustl.edu	37	18	3025533	3025534	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	3025533	3025534	AA	-	DEL	ENSG00000252258	ENST00000516449	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SNORA70	RFAM	ENSG00000252258				21	0	0	14	5	26.3158
DTNA	0	genome.wustl.edu	37	18	32395860	32395860	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	32395860	32395860	T	-	DEL	DTNA	ENST00000592114	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	DTNA	HGNC	ENSG00000134769				49	0	0	38	11	22.449
DLGAP1-AS1	0	genome.wustl.edu	37	18	3597089	3597090	+	RNA	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	3597089	3597090	-	T	INS	DLGAP1-AS1	ENST00000317114	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.002	-	-	-	no_errors	DLGAP1-AS1	HGNC	ENSG00000177337				35	0	0	32	8	20
PIK3C3	0	genome.wustl.edu	37	18	39644789	39644789	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	39644789	39644789	A	-	DEL	PIK3C3	ENST00000262039	human	ensembl	74_37	+1	known	frame_shift_del	c.2518	p.K841fs	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pirsf_PI3K_Vps34,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pirsf_PI3K_Vps34,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C3	HGNC	ENSG00000078142				30	0	0	22	7	24.1379
SETBP1	0	genome.wustl.edu	37	18	42281745	42281746	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	42281745	42281746	-	A	INS	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	frame_shift_ins	c.434_435	p.N147fs	1.000:1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217				89	0	0	102	19	15.7025
EPG5	0	genome.wustl.edu	37	18	43459143	43459143	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	43459143	43459143	A	-	DEL	EPG5	ENST00000282041	human	ensembl	74_37	-1	known	frame_shift_del	c.5704	p.Y1902fs	1.000	NULL	NULL	-	no_errors	EPG5	HGNC	ENSG00000152223				59	0	0	79	21	21
ZBTB7C	0	genome.wustl.edu	37	18	45567084	45567085	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	45567084	45567085	-	C	INS	ZBTB7C	ENST00000332053	human	ensembl	74_37	-1	known	frame_shift_ins	c.395_394	p.D132fs	0.004:0.050	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7C	HGNC	ENSG00000184828				44	0	0	30	6	16.6667
ENSG00000266171	0	genome.wustl.edu	37	18	736979	736979	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	18	736979	736979	A	-	DEL	ENSG00000266171	ENST00000583314	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-769O8.1	Clone_based_vega_gene	ENSG00000266171				28	0	0	18	8	30.7692
ILF3	0	genome.wustl.edu	37	19	10792683	10792683	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	10792683	10792683	C	-	DEL	ILF3	ENST00000449870	human	ensembl	74_37	+1	known	frame_shift_del	c.1195	p.Q401fs	1.000	pfscan_dsRNA-bd_dom	pfam_DZF,pfam_dsRNA-bd_dom,smart_DZF,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	ILF3	HGNC	ENSG00000129351				44	0	0	70	20	22.2222
DNM2	0	genome.wustl.edu	37	19	10940881	10940882	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	10940881	10940882	-	C	INS	DNM2	ENST00000314646	human	ensembl	74_37	+1	known	frame_shift_ins	c.2370_2371	p.L792fs	0.894:1.000	NULL	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM2	HGNC	ENSG00000079805				116	0	0	85	19	18.2692
SWSAP1	0	genome.wustl.edu	37	19	11485602	11485602	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	11485602	11485602	C	-	DEL	SWSAP1	ENST00000312423	human	ensembl	74_37	+1	known	frame_shift_del	c.183	p.Q62fs	0.975	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	SWSAP1	HGNC	ENSG00000173928				177	0	0	145	41	22.043
ZNF878	0	genome.wustl.edu	37	19	12155503	12155504	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	12155503	12155504	-	A	INS	ZNF878	ENST00000602107	human	ensembl	74_37	-1	known	frame_shift_ins	c.854_853	p.S285fs	0.001:0.007	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF878	HGNC	ENSG00000257446				78	0	0	61	15	19.7368
ZNF709	0	genome.wustl.edu	37	19	12575800	12575800	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	12575800	12575800	T	-	DEL	ZNF709	ENST00000397732	human	ensembl	74_37	-1	known	frame_shift_del	c.936	p.K312fs	0.029	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_Znf_C2H2_jaz,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF709	HGNC	ENSG00000242852				44	0	0	30	10	25
OR7C1	0	genome.wustl.edu	37	19	14910414	14910414	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	14910414	14910414	A	-	DEL	OR7C1	ENST00000248073	human	ensembl	74_37	-1	known	frame_shift_del	c.535	p.C179fs	0.978	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7C1	HGNC	ENSG00000127530				130	1	0.763359	119	28	19.0476
OR7A10	0	genome.wustl.edu	37	19	14952157	14952157	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	14952157	14952157	A	-	DEL	OR7A10	ENST00000248058	human	ensembl	74_37	-1	known	frame_shift_del	c.533	p.F178fs	0.992	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7A10	HGNC	ENSG00000127515				108	0	0	80	20	20
ZNF431	0	genome.wustl.edu	37	19	21365724	21365725	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	21365724	21365725	-	A	INS	ZNF431	ENST00000311048	human	ensembl	74_37	+1	known	frame_shift_ins	c.618_619	p.C208fs	0.009:0.005	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF431	HGNC	ENSG00000196705				49	0	0	47	9	16.0714
DOT1L	0	genome.wustl.edu	37	19	2210766	2210766	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	2210766	2210766	C	-	DEL	DOT1L	ENST00000398665	human	ensembl	74_37	+1	known	frame_shift_del	c.1263	p.E423fs	0.067	pirsf_Histone_H3-K79_MeTrfase_met	pfam_DOT1,pirsf_Histone_H3-K79_MeTrfase_met	-	no_errors	DOT1L	HGNC	ENSG00000104885				119	0	0	90	19	17.4312
ZNF724P	0	genome.wustl.edu	37	19	23406702	23406702	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	23406702	23406702	T	-	DEL	ZNF724P	ENST00000418100	human	ensembl	74_37	-1	novel	frame_shift_del	c.345	p.G116fs	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF724P	HGNC	ENSG00000196081				31	0	0	28	11	28.2051
RGS9BP	0	genome.wustl.edu	37	19	33167775	33167776	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	33167775	33167776	-	G	INS	RGS9BP	ENST00000334176	human	ensembl	74_37	+1	known	frame_shift_ins	c.606_607	p.C205fs	0.004:0.000	NULL	NULL	-	no_errors	RGS9BP	HGNC	ENSG00000186326				28	0	0	16	5	23.8095
MFSD12	0	genome.wustl.edu	37	19	3542859	3542859	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	3542859	3542859	G	-	DEL	MFSD12	ENST00000398558	human	ensembl	74_37	-1	known	frame_shift_del	c.1537	p.L513fs	0.004	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD12	HGNC	ENSG00000161091				75	0	0	47	9	16.0714
LGI4	0	genome.wustl.edu	37	19	35625539	35625539	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	35625539	35625539	C	-	DEL	LGI4	ENST00000310123	human	ensembl	74_37	-1	known	frame_shift_del	c.46	p.V16fs	0.001	NULL	pfam_EPTP,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI4	HGNC	ENSG00000153902				9	0	0	11	6	35.2941
ZNF567	0	genome.wustl.edu	37	19	37210374	37210375	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	37210374	37210375	-	A	INS	ZNF567	ENST00000536254	human	ensembl	74_37	+1	known	frame_shift_ins	c.748_749	p.H253fs	0.998:0.991	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF567	HGNC	ENSG00000189042				22	0	0	28	5	15.1515
PSMC4	0	genome.wustl.edu	37	19	40480308	40480308	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	40480308	40480308	C	-	DEL	PSMC4	ENST00000157812	human	ensembl	74_37	+1	known	frame_shift_del	c.430	p.E146fs	1.000	tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC4	HGNC	ENSG00000013275				72	0	0	52	16	23.5294
MEGF8	0	genome.wustl.edu	37	19	42880019	42880020	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	42880019	42880020	-	G	INS	MEGF8	ENST00000251268	human	ensembl	74_37	+1	known	frame_shift_ins	c.7630_7631	p.A2546fs	1.000:0.999	NULL	pfam_CUB_dom,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_CUB_dom,smart_EG-like_dom,smart_Plexin-like_fold,smart_EGF-like_Ca-bd_dom,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429				29	0	0	31	5	13.8889
CLASRP	0	genome.wustl.edu	37	19	45556129	45556129	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	45556129	45556129	C	-	DEL	CLASRP	ENST00000221455	human	ensembl	74_37	+1	known	frame_shift_del	c.278	p.P95fs	0.989	pfam_SWAP_N_domain	pfam_SWAP_N_domain	-	no_errors	CLASRP	HGNC	ENSG00000104859				145	0	0	96	26	21.3115
PPP1R13L	0	genome.wustl.edu	37	19	45895270	45895270	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	45895270	45895270	C	-	DEL	PPP1R13L	ENST00000360957	human	ensembl	74_37	-1	known	frame_shift_del	c.1683	p.P562fs	0.003	NULL	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PPP1R13L	HGNC	ENSG00000104881				116	0	0	78	29	27.1028
ZC3H4	0	genome.wustl.edu	37	19	47570052	47570052	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	47570052	47570052	C	-	DEL	ZC3H4	ENST00000253048	human	ensembl	74_37	-1	known	frame_shift_del	c.3473	p.G1158fs	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H4	HGNC	ENSG00000130749				23	0	0	20	8	28.5714
SLC8A2	0	genome.wustl.edu	37	19	47940742	47940742	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	47940742	47940742	A	-	DEL	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	frame_shift_del	c.2087	p.L696fs	0.992	tigrfam_Na_Ca_Ex	pfam_Calx_beta,pfam_NaCa_Exmemb,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A2	HGNC	ENSG00000118160				99	0	0	110	23	17.2932
GLTSCR1	0	genome.wustl.edu	37	19	48197891	48197891	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	48197891	48197891	C	-	DEL	GLTSCR1	ENST00000396720	human	ensembl	74_37	+1	known	frame_shift_del	c.2803	p.P937fs	0.226	NULL	NULL	-	no_errors	GLTSCR1	HGNC	ENSG00000063169				41	0	0	26	10	27.7778
BAX	0	genome.wustl.edu	37	19	49458971	49458972	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	49458971	49458972	GG	-	DEL	BAX	ENST00000293288	human	ensembl	74_37	+1	known	frame_shift_del	c.114_115	p.E41fs	0.588:0.572	NULL	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	-	no_errors	BAX	HGNC	ENSG00000087088				67	0	0	70	24	25.5319
UHRF1	0	genome.wustl.edu	37	19	4954424	4954426	+	RNA	DEL	GGA	GGA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	4954424	4954426	GGA	-	DEL	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.004:0.005	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063				33	0	0	42	15	26.3158
PRR12	0	genome.wustl.edu	37	19	50099983	50099984	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	50099983	50099984	-	C	INS	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	frame_shift_ins	c.2391_2392	p.Q799fs	0.978:0.987	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464				54	0	0	44	9	16.9811
ZNF808	0	genome.wustl.edu	37	19	53056441	53056442	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	53056441	53056442	AA	-	DEL	ZNF808	ENST00000359798	human	ensembl	74_37	+1	known	frame_shift_del	c.272_273	p.R92fs	0.000:0.001	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF808	HGNC	ENSG00000198482				238	0	0	185	41	18.1416
NLRP2	0	genome.wustl.edu	37	19	55512184	55512184	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	55512184	55512184	A	-	DEL	NLRP2	ENST00000448584	human	ensembl	74_37	+1	known	frame_shift_del	c.3107	p.N1038fs	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP2	HGNC	ENSG00000022556				54	0	0	55	13	19.1176
GP6	0	genome.wustl.edu	37	19	55526104	55526107	+	Frame_Shift_Del	DEL	CAGA	CAGA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CAGA	CAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	55526104	55526107	CAGA	-	DEL	GP6	ENST00000310373	human	ensembl	74_37	-1	known	frame_shift_del	c.1209_1206	p.P404fs	0.009:0.011:0.014:0.015	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	GP6	HGNC	ENSG00000088053				47	0	0	29	11	27.5
PPP1R12C	0	genome.wustl.edu	37	19	55607456	55607456	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	55607456	55607456	G	-	DEL	PPP1R12C	ENST00000263433	human	ensembl	74_37	-1	known	frame_shift_del	c.1116	p.I373fs	0.157	pirsf_Pase-1_reg_su_12A/B/C_euk	pirsf_Pase-1_reg_su_12A/B/C_euk,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R12C	HGNC	ENSG00000125503				121	0	0	88	33	27.2727
NLRP9	0	genome.wustl.edu	37	19	56249722	56249722	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	56249722	56249722	A	-	DEL	NLRP9	ENST00000332836	human	ensembl	74_37	-1	known	frame_shift_del	c.19	p.S7fs	0.009	superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792				148	0	0	103	23	18.254
C19orf70	0	genome.wustl.edu	37	19	5679653	5679654	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	5679653	5679654	-	G	INS	C19orf70	ENST00000309324	human	ensembl	74_37	-1	known	frame_shift_ins	c.151_150	p.A50fs	0.975:0.000	NULL	NULL	-	no_errors	C19orf70	HGNC	ENSG00000174917				95	0	0	64	16	20
PEG3	0	genome.wustl.edu	37	19	57328919	57328919	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	57328919	57328919	T	-	DEL	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	frame_shift_del	c.891	p.K297fs	0.162	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300				61	0	0	73	12	14.1176
ZNF749	0	genome.wustl.edu	37	19	57955516	57955516	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	57955516	57955516	T	-	DEL	ZNF749	ENST00000334181	human	ensembl	74_37	+1	known	frame_shift_del	c.1000	p.F335fs	0.005	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF749	HGNC	ENSG00000186230				74	0	0	60	16	21.0526
PSPN	0	genome.wustl.edu	37	19	6375793	6375793	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	6375793	6375793	C	-	DEL	PSPN	ENST00000245810	human	ensembl	74_37	-1	known	frame_shift_del	c.68	p.G23fs	0.001	NULL	pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	PSPN	HGNC	ENSG00000125650				53	0	0	46	9	16.3636
SLC25A41	0	genome.wustl.edu	37	19	6430131	6430131	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	6430131	6430131	C	-	DEL	SLC25A41	ENST00000321510	human	ensembl	74_37	-1	known	frame_shift_del	c.405	p.L136fs	0.003	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A41	HGNC	ENSG00000181240				29	0	0	21	4	16
FGF22	0	genome.wustl.edu	37	19	643527	643528	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	19	643527	643528	-	G	INS	FGF22	ENST00000215530	human	ensembl	74_37	+1	known	frame_shift_ins	c.436_437	p.P149fs	0.001:0.001	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF22	HGNC	ENSG00000070388				28	0	0	28	4	12.5
RANBP2	0	genome.wustl.edu	37	2	109380652	109380652	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	109380652	109380652	A	-	DEL	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	frame_shift_del	c.3657	p.I1221fs	0.489	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				91	0	0	90	17	15.8879
SLC35F5	0	genome.wustl.edu	37	2	114500277	114500278	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	114500277	114500278	AA	-	DEL	SLC35F5	ENST00000245680	human	ensembl	74_37	-1	known	frame_shift_del	c.742_741	p.F247fs	1.000:1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35F5	HGNC	ENSG00000115084				101	0	0	85	20	19.0476
CLASP1	0	genome.wustl.edu	37	2	122125357	122125358	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	122125357	122125358	-	C	INS	CLASP1	ENST00000263710	human	ensembl	74_37	-1	known	frame_shift_ins	c.3693_3692	p.S1232fs	0.024:0.316	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054				60	0	0	48	9	15.7895
ENSG00000231731	0	genome.wustl.edu	37	2	128263364	128263366	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	128263364	128263366	AAA	-	DEL	ENSG00000231731	ENST00000599001	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.233:0.319:0.309	-	-	-	no_errors	AC010976.2	Clone_based_vega_gene	ENSG00000231731				31	0	0	34	8	19.0476
SAP130	0	genome.wustl.edu	37	2	128699612	128699613	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	128699612	128699613	-	T	INS	SAP130	ENST00000357702	human	ensembl	74_37	-1	known	frame_shift_ins	c.3220_3219	p.V1073fs	1.000:1.000	NULL	NULL	-	no_errors	SAP130	HGNC	ENSG00000136715				77	0	0	71	13	15.4762
SPOPL	0	genome.wustl.edu	37	2	139316720	139316720	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	139316720	139316720	T	-	DEL	SPOPL	ENST00000280098	human	ensembl	74_37	+1	known	frame_shift_del	c.609	p.F205fs	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_MATH,superfamily_TRAF-like,superfamily_BTB/POZ_fold,smart_MATH,smart_BTB/POZ-like,pfscan_BTB/POZ-like,pfscan_MATH	-	no_errors	SPOPL	HGNC	ENSG00000144228				98	0	0	118	27	18.6207
CCDC148	0	genome.wustl.edu	37	2	159077217	159077217	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	159077217	159077217	T	-	DEL	CCDC148	ENST00000283233	human	ensembl	74_37	-1	known	frame_shift_del	c.1260	p.K420fs	1.000	NULL	NULL	-	no_errors	CCDC148	HGNC	ENSG00000153237				10	0	0	16	6	27.2727
MARCH7	0	genome.wustl.edu	37	2	160604680	160604680	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	160604680	160604680	T	-	DEL	MARCH7	ENST00000259050	human	ensembl	74_37	+1	known	frame_shift_del	c.879	p.S296fs	0.910	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH7	HGNC	ENSG00000136536				33	0	0	26	8	23.5294
FIGN	0	genome.wustl.edu	37	2	164468132	164468132	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	164468132	164468132	T	-	DEL	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	frame_shift_del	c.210	p.K70fs	0.998	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263				156	0	0	141	27	16.0714
PXDN	0	genome.wustl.edu	37	2	1652983	1652984	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	1652983	1652984	-	G	INS	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	frame_shift_ins	c.2569_2568	p.C856fs	1.000:0.996	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508				45	0	0	44	4	8.33333
XIRP2	0	genome.wustl.edu	37	2	168103737	168103737	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	168103737	168103737	A	-	DEL	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	frame_shift_del	c.5835	p.D1948fs	0.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092				63	0	0	28	8	22.2222
DYNC1I2	0	genome.wustl.edu	37	2	172549339	172549339	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	172549339	172549339	A	-	DEL	DYNC1I2	ENST00000397119	human	ensembl	74_37	+1	known	frame_shift_del	c.161	p.R57fs	1.000	NULL	pfam_Dynein_IC_1/2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DYNC1I2	HGNC	ENSG00000077380				21	0	0	28	4	12.5
TTN	0	genome.wustl.edu	37	2	179431363	179431364	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	179431363	179431364	GT	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.71792_71791	p.T23931fs	1.000:1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				219	0	0	214	54	20.1493
ENSG00000224643	0	genome.wustl.edu	37	2	183948142	183948142	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	183948142	183948142	T	-	DEL	ENSG00000224643	ENST00000444562	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC064871.3	Clone_based_vega_gene	ENSG00000224643				12	0	0	11	12	52.1739
NUP35	0	genome.wustl.edu	37	2	184025805	184025805	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	184025805	184025805	A	-	DEL	NUP35	ENST00000295119	human	ensembl	74_37	+1	known	frame_shift_del	c.927	p.D312fs	0.996	pirsf_Nucleoporin_NUP53	pfam_RRM_NUP35_dom,pirsf_Nucleoporin_NUP53	-	no_errors	NUP35	HGNC	ENSG00000163002				43	0	0	23	17	42.5
CCDC150	0	genome.wustl.edu	37	2	197531519	197531519	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	197531519	197531519	A	-	DEL	CCDC150	ENST00000389175	human	ensembl	74_37	+1	known	frame_shift_del	c.839	p.K283fs	0.374	NULL	NULL	-	no_errors	CCDC150	HGNC	ENSG00000144395				29	0	0	21	4	16
MATN3	0	genome.wustl.edu	37	2	20200211	20200211	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	20200211	20200211	T	-	DEL	MATN3	ENST00000407540	human	ensembl	74_37	-1	known	frame_shift_del	c.1159	p.T387fs	1.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_VWF_A,pfam_Matrilin_coiled-coil_trimer,pfam_EGF-like_Ca-bd_dom,smart_VWF_A,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_A	-	no_errors	MATN3	HGNC	ENSG00000132031				29	0	0	39	9	18.75
CASP8	0	genome.wustl.edu	37	2	202151290	202151290	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	202151290	202151290	A	-	DEL	CASP8	ENST00000358485	human	ensembl	74_37	+1	known	frame_shift_del	c.1590	p.K532fs	0.061	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_p10	pfam_DED,pfam_Pept_C14_caspase,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012				52	0	0	28	10	26.3158
RAPH1	0	genome.wustl.edu	37	2	204305619	204305619	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	204305619	204305619	G	-	DEL	RAPH1	ENST00000374493	human	ensembl	74_37	-1	known	frame_shift_del	c.2450	p.P817fs	0.409	NULL	pfam_Ras-assoc,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,prints_Paxillin	-	no_errors	RAPH1	HGNC	ENSG00000173166				124	1	0.8	89	24	21.2389
MAP2	0	genome.wustl.edu	37	2	210574801	210574802	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	210574801	210574802	-	A	INS	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	frame_shift_ins	c.4896_4897	p.S1633fs	1.000:1.000	NULL	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018				166	0	0	87	46	34.5865
AGAP1	0	genome.wustl.edu	37	2	236649677	236649677	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	236649677	236649677	C	-	DEL	AGAP1	ENST00000304032	human	ensembl	74_37	+1	known	frame_shift_del	c.381	p.P129fs	0.952	pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP1	HGNC	ENSG00000157985				74	0	0	66	14	17.5
ADCY3	0	genome.wustl.edu	37	2	25141477	25141477	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	25141477	25141477	T	-	DEL	ADCY3	ENST00000260600	human	ensembl	74_37	-1	known	frame_shift_del	c.380	p.K127fs	1.000	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY3	HGNC	ENSG00000138031				116	0	0	93	15	13.8889
KIF3C	0	genome.wustl.edu	37	2	26203373	26203374	+	In_Frame_Ins	INS	-	-	CTC			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	26203373	26203374	-	CTC	INS	KIF3C	ENST00000264712	human	ensembl	74_37	-1	known	in_frame_ins	c.1414_1413	p.471in_frame_insE	1.000:1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3C	HGNC	ENSG00000084731				113	0	0	93	21	18.4211
CGREF1	0	genome.wustl.edu	37	2	27324215	27324216	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	27324215	27324216	-	C	INS	CGREF1	ENST00000312734	human	ensembl	74_37	-1	known	frame_shift_ins	c.884_883	p.E295fs	0.008:0.010	NULL	pfscan_EF_hand_dom	-	no_errors	CGREF1	HGNC	ENSG00000138028				282	0	0	281	80	22.1607
CAD	0	genome.wustl.edu	37	2	27456982	27456982	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	27456982	27456982	C	-	DEL	CAD	ENST00000264705	human	ensembl	74_37	+1	known	frame_shift_del	c.3506	p.P1171fs	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,pfscan_ATP-grasp,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				81	0	0	56	32	36.3636
EIF2B4	0	genome.wustl.edu	37	2	27591536	27591536	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	27591536	27591536	T	-	DEL	EIF2B4	ENST00000347454	human	ensembl	74_37	-1	known	frame_shift_del	c.483	p.K161fs	1.000	NULL	pfam_IF-2B-related	-	no_errors	EIF2B4	HGNC	ENSG00000115211				76	0	0	60	14	18.9189
NRBP1	0	genome.wustl.edu	37	2	27658017	27658018	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	27658017	27658018	-	C	INS	NRBP1	ENST00000233557	human	ensembl	74_37	+1	known	frame_shift_ins	c.584_585	p.I198fs	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NRBP1	HGNC	ENSG00000115216				108	0	0	120	20	14.2857
ACP1	0	genome.wustl.edu	37	2	277054	277054	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	277054	277054	A	-	DEL	ACP1	ENST00000272065	human	ensembl	74_37	+1	known	frame_shift_del	c.368	p.K124fs	0.993	pfam_Ptyr_pPase_SF,superfamily_Ptyr_pPase_SF,smart_Ptyr_pPase_SF,prints_Tyr_Pase_low_mol_wt_mml	pfam_Ptyr_pPase_SF,superfamily_Ptyr_pPase_SF,smart_Ptyr_pPase_SF,prints_Tyr_Pase_low_mol_wt_mml,prints_Tyr_phospatase/Ars_reductase	-	no_errors	ACP1	HGNC	ENSG00000143727				51	0	0	46	11	19.2982
BRE	0	genome.wustl.edu	37	2	28248273	28248273	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	28248273	28248273	A	-	DEL	BRE	ENST00000344773	human	ensembl	74_37	+1	known	frame_shift_del	c.481	p.N163fs	1.000	pfam_Brain/reproduct-express_prot	pfam_Brain/reproduct-express_prot	-	no_errors	BRE	HGNC	ENSG00000158019				35	0	0	43	12	21.8182
COX7A2L	0	genome.wustl.edu	37	2	42578275	42578275	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	42578275	42578275	A	-	DEL	COX7A2L	ENST00000482463	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	COX7A2L	HGNC	ENSG00000115944				13	0	0	8	5	38.4615
PPM1B	0	genome.wustl.edu	37	2	44445212	44445212	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	44445212	44445212	T	-	DEL	PPM1B	ENST00000282412	human	ensembl	74_37	+1	known	frame_shift_del	c.1071	p.G358fs	1.000	pfam_PP2C_C,superfamily_PP2C_C	pfam_PP2C-like_dom,pfam_PP2C_C,superfamily_PP2C-like_dom,superfamily_PP2C_C,smart_PP2C-like_dom	-	no_errors	PPM1B	HGNC	ENSG00000138032				55	0	0	70	20	22.2222
MTIF2	0	genome.wustl.edu	37	2	55489457	55489457	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	55489457	55489457	T	-	DEL	MTIF2	ENST00000263629	human	ensembl	74_37	-1	known	frame_shift_del	c.326	p.N109fs	0.998	NULL	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,pfam_GTP_binding_domain,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,superfamily_TIF_IF2_dom3,superfamily_Transl_B-barrel,tigrfam_Small_GTP-bd_dom	-	no_errors	MTIF2	HGNC	ENSG00000085760				67	0	0	67	26	27.957
REL	0	genome.wustl.edu	37	2	61147771	61147771	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	61147771	61147771	A	-	DEL	REL	ENST00000295025	human	ensembl	74_37	+1	known	frame_shift_del	c.1081	p.E363fs	1.000	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	REL	HGNC	ENSG00000162924				26	0	0	29	12	29.2683
WBP1	0	genome.wustl.edu	37	2	74687550	74687550	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	74687550	74687550	T	-	DEL	WBP1	ENST00000233615	human	ensembl	74_37	+1	known	frame_shift_del	c.552	p.H185fs	0.970	NULL	pfam_Uncharacterised_WW-bd	-	no_errors	WBP1	HGNC	ENSG00000239779				167	0	0	136	46	25.2747
CCDC142	0	genome.wustl.edu	37	2	74708466	74708466	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	74708466	74708466	C	-	DEL	CCDC142	ENST00000393965	human	ensembl	74_37	-1	known	frame_shift_del	c.1142	p.G381fs	0.000	NULL	NULL	-	no_errors	CCDC142	HGNC	ENSG00000135637				89	0	0	69	23	25
HTRA2	0	genome.wustl.edu	37	2	74757473	74757473	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	2	74757473	74757473	G	-	DEL	HTRA2	ENST00000258080	human	ensembl	74_37	+1	known	frame_shift_del	c.340	p.A116fs	0.979	NULL	pfam_Peptidase_S1,pfam_PDZ,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA2	HGNC	ENSG00000115317				31	0	0	7	6	46.1538
CCM2L	0	genome.wustl.edu	37	20	30602812	30602812	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	30602812	30602812	C	-	DEL	CCM2L	ENST00000300415	human	ensembl	74_37	+1	known	frame_shift_del	c.136	p.D48fs	1.000	NULL	NULL	-	no_errors	CCM2L	HGNC	ENSG00000101331				139	0	0	107	35	24.6479
KIAA1755	0	genome.wustl.edu	37	20	36851953	36851953	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	36851953	36851953	G	-	DEL	KIAA1755	ENST00000279024	human	ensembl	74_37	-1	known	frame_shift_del	c.2255	p.P752fs	0.938	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	KIAA1755	HGNC	ENSG00000149633				31	0	0	25	5	16.6667
PIGT	0	genome.wustl.edu	37	20	44050025	44050026	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	44050025	44050026	-	C	INS	PIGT	ENST00000279036	human	ensembl	74_37	+1	known	frame_shift_ins	c.1036_1037	p.V349fs	0.980:0.666	pfam_PIG-T	pfam_PIG-T	-	no_errors	PIGT	HGNC	ENSG00000124155				37	0	0	30	7	18.9189
DDX27	0	genome.wustl.edu	37	20	47858504	47858504	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	47858504	47858504	A	-	DEL	DDX27	ENST00000371764	human	ensembl	74_37	+1	known	frame_shift_del	c.2065	p.K691fs	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX27	HGNC	ENSG00000124228				89	0	0	86	26	23.2143
ZNF831	0	genome.wustl.edu	37	20	57767196	57767196	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	57767196	57767196	G	-	DEL	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	frame_shift_del	c.1122	p.E376fs	0.161	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203				34	0	0	20	4	16.6667
BMP2	0	genome.wustl.edu	37	20	6758962	6758962	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	20	6758962	6758962	C	-	DEL	BMP2	ENST00000378827	human	ensembl	74_37	+1	known	frame_shift_del	c.417	p.T141fs	0.996	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP2	HGNC	ENSG00000125845				49	0	0	52	9	14.7541
TPTE	0	genome.wustl.edu	37	21	10944697	10944697	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	10944697	10944697	A	-	DEL	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	frame_shift_del	c.537	p.F179fs	0.335	pfam_Ion_trans_dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157				157	1	0.632911	180	19	9.54774
CLIC6	0	genome.wustl.edu	37	21	36042950	36042950	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	36042950	36042950	C	-	DEL	CLIC6	ENST00000360731	human	ensembl	74_37	+1	known	frame_shift_del	c.1263	p.A423fs	0.000	NULL	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	-	no_errors	CLIC6	HGNC	ENSG00000159212				21	0	0	6	7	53.8462
SIK1	0	genome.wustl.edu	37	21	44841868	44841868	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	44841868	44841868	T	-	DEL	SIK1	ENST00000270162	human	ensembl	74_37	-1	known	frame_shift_del	c.323	p.N108fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SIK1	HGNC	ENSG00000142178				67	0	0	27	12	30.7692
COL6A1	0	genome.wustl.edu	37	21	47423058	47423059	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	21	47423058	47423059	-	C	INS	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	frame_shift_ins	c.2459_2460	p.I822fs	1.000:0.989	NULL	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156				77	0	0	27	9	25
MICAL3	0	genome.wustl.edu	37	22	18274009	18274011	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	18274009	18274011	CTC	-	DEL	MICAL3	ENST00000441493	human	ensembl	74_37	-1	known	in_frame_del	c.5709_5707	p.E1903in_frame_del	1.000:1.000:1.000	pfam_DUF3585	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156				33	0	0	30	6	16.6667
TSSK2	0	genome.wustl.edu	37	22	19119732	19119732	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	19119732	19119732	C	-	DEL	TSSK2	ENST00000399635	human	ensembl	74_37	+1	known	frame_shift_del	c.820	p.K276fs	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TSSK2	HGNC	ENSG00000206203				89	0	0	56	18	24.3243
HPS4	0	genome.wustl.edu	37	22	26875305	26875306	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	26875305	26875306	-	A	INS	HPS4	ENST00000398141	human	ensembl	74_37	-1	known	frame_shift_ins	c.43_42	p.L14fs	1.000:0.995	NULL	NULL	-	no_errors	HPS4	HGNC	ENSG00000100099				35	0	0	38	6	13.6364
OSBP2	0	genome.wustl.edu	37	22	31289119	31289120	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	31289119	31289120	-	C	INS	OSBP2	ENST00000332585	human	ensembl	74_37	+1	known	frame_shift_ins	c.1880_1881	p.S630fs	1.000:1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,superfamily_DNA-bd_dom_put,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBP2	HGNC	ENSG00000184792				55	0	0	53	12	18.4615
LIMK2	0	genome.wustl.edu	37	22	31674448	31674448	+	RNA	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	31674448	31674448	G	-	DEL	LIMK2	ENST00000467301	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	LIMK2	HGNC	ENSG00000182541				85	0	0	91	17	15.7407
MEI1	0	genome.wustl.edu	37	22	42195331	42195334	+	RNA	DEL	GAGA	GAGA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GAGA	GAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	22	42195331	42195334	GAGA	-	DEL	MEI1	ENST00000487535	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013:0.210:0.222:0.229	-	-	-	no_errors	MEI1	HGNC	ENSG00000167077				42	0	0	32	6	15.7895
ENSG00000206567	0	genome.wustl.edu	37	3	10050174	10050174	+	RNA	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	10050174	10050174	G	-	DEL	ENSG00000206567	ENST00000383808	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.800	-	-	-	no_errors	AC022007.5	Clone_based_vega_gene	ENSG00000206567				84	0	0	63	21	25
KIAA1407	0	genome.wustl.edu	37	3	113750520	113750520	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	113750520	113750520	T	-	DEL	KIAA1407	ENST00000295878	human	ensembl	74_37	-1	known	frame_shift_del	c.925	p.R309fs	0.999	NULL	NULL	-	no_errors	KIAA1407	HGNC	ENSG00000163617				24	0	0	35	7	16.6667
ZBTB20	0	genome.wustl.edu	37	3	114058003	114058003	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	114058003	114058003	G	-	DEL	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	frame_shift_del	c.2075	p.P692fs	0.678	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				102	0	0	64	50	43.8596
OXNAD1	0	genome.wustl.edu	37	3	16336480	16336481	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	16336480	16336481	-	C	INS	OXNAD1	ENST00000544043	human	ensembl	74_37	+1	known	frame_shift_ins	c.462_463	p.A155fs	1.000:1.000	superfamily_Riboflavin_synthase-like_b-brl	pfam_OxRdtase_FAD/NAD-bd,pfam_Fe_red_NAD-bd_6,superfamily_Riboflavin_synthase-like_b-brl,prints_Phe_hydroxylase,prints_NADH-Cyt_B5_reductase	-	no_errors	OXNAD1	HGNC	ENSG00000154814				144	0	0	89	25	21.9298
SERPINI2	0	genome.wustl.edu	37	3	167185060	167185060	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	167185060	167185060	A	-	DEL	SERPINI2	ENST00000264677	human	ensembl	74_37	-1	known	frame_shift_del	c.261	p.F87fs	0.010	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINI2	HGNC	ENSG00000114204				23	0	0	25	7	21.875
TNIK	0	genome.wustl.edu	37	3	170885049	170885050	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	170885049	170885050	-	T	INS	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	frame_shift_ins	c.784_783	p.F261fs	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310				42	0	0	30	7	18.9189
FXR1	0	genome.wustl.edu	37	3	180666228	180666228	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	180666228	180666228	A	-	DEL	FXR1	ENST00000357559	human	ensembl	74_37	+1	known	frame_shift_del	c.364	p.N124fs	1.000	NULL	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,superfamily_NA-bd_OB-fold,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR1	HGNC	ENSG00000114416				57	0	0	42	17	28.8136
PSMD2	0	genome.wustl.edu	37	3	184021113	184021113	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	184021113	184021113	G	-	DEL	PSMD2	ENST00000310118	human	ensembl	74_37	+1	known	frame_shift_del	c.1075	p.G360fs	1.000	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn1	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn1	-	no_errors	PSMD2	HGNC	ENSG00000175166				111	0	0	94	17	15.3153
SDHAP1	0	genome.wustl.edu	37	3	195709193	195709193	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	195709193	195709193	A	-	DEL	SDHAP1	ENST00000413474	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.759	-	-	-	no_errors	SDHAP1	HGNC	ENSG00000185485				26	0	0	29	3	9.375
PIGZ	0	genome.wustl.edu	37	3	196674359	196674360	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	196674359	196674360	-	G	INS	PIGZ	ENST00000412723	human	ensembl	74_37	-1	known	frame_shift_ins	c.1409_1408	p.R470fs	0.995:0.997	NULL	pfam_GPI_mannosylTrfase	-	no_errors	PIGZ	HGNC	ENSG00000119227				59	0	0	62	8	11.4286
EFHB	0	genome.wustl.edu	37	3	19921203	19921205	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	19921203	19921205	CTC	-	DEL	EFHB	ENST00000295824	human	ensembl	74_37	-1	known	in_frame_del	c.2422_2420	p.G807in_frame_del	1.000:0.996:0.996	NULL	pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFHB	HGNC	ENSG00000163576				101	0	0	81	30	27.027
NR1D2	0	genome.wustl.edu	37	3	23996272	23996272	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	23996272	23996272	A	-	DEL	NR1D2	ENST00000312521	human	ensembl	74_37	+1	known	frame_shift_del	c.261	p.S89fs	0.757	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR1D2	HGNC	ENSG00000174738				65	0	0	62	14	18.4211
ARPP21	0	genome.wustl.edu	37	3	35833708	35833708	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	35833708	35833708	A	-	DEL	ARPP21	ENST00000476052	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARPP21	HGNC	ENSG00000172995				25	0	0	22	4	15.3846
HSPD1P6	0	genome.wustl.edu	37	3	36810381	36810381	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	36810381	36810381	T	-	DEL	HSPD1P6	ENST00000424886	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040	-	-	-	no_errors	HSPD1P6	HGNC	ENSG00000230067				14	0	0	5	8	61.5385
TRANK1	0	genome.wustl.edu	37	3	36874617	36874617	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	36874617	36874617	T	-	DEL	TRANK1	ENST00000429976	human	ensembl	74_37	-1	known	frame_shift_del	c.6325	p.T2109fs	0.075	NULL	pfam_UvrD-like_ATP-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom	-	no_errors	TRANK1	HGNC	ENSG00000168016				17	0	0	17	5	22.7273
CHL1	0	genome.wustl.edu	37	3	440036	440036	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	440036	440036	T	-	DEL	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	frame_shift_del	c.3221	p.Q1076fs	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121				71	0	0	58	21	26.5823
ZNF35	0	genome.wustl.edu	37	3	44700762	44700763	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	44700762	44700763	-	A	INS	ZNF35	ENST00000396056	human	ensembl	74_37	+1	known	frame_shift_ins	c.907_908	p.T305fs	1.000:1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF35	HGNC	ENSG00000169981				70	0	0	66	20	23.2558
ITPR1	0	genome.wustl.edu	37	3	4732998	4732999	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	4732998	4732999	-	A	INS	ITPR1	ENST00000302640	human	ensembl	74_37	+1	known	frame_shift_ins	c.3954_3955	p.C1320fs	0.996:1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995				32	0	0	17	5	22.7273
PTPN23	0	genome.wustl.edu	37	3	47452588	47452588	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	47452588	47452588	C	-	DEL	PTPN23	ENST00000265562	human	ensembl	74_37	+1	known	frame_shift_del	c.3300	p.P1102fs	0.048	NULL	pfam_BRO1_dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_BRO1_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN23	HGNC	ENSG00000076201				20	0	0	16	6	27.2727
APEH	0	genome.wustl.edu	37	3	49719319	49719319	+	Splice_Site	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	49719319	49719319	G	-	DEL	APEH	ENST00000296456	human	ensembl	74_37	+1	known	splice_site_del	c.1523-1	e17-1	1.000	-	-	-	no_errors	APEH	HGNC	ENSG00000164062				179	0	0	112	18	13.8462
RBM6	0	genome.wustl.edu	37	3	50005144	50005145	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	50005144	50005145	-	G	INS	RBM6	ENST00000266022	human	ensembl	74_37	+1	known	frame_shift_ins	c.286_287	p.D99fs	1.000:1.000	NULL	pfam_G_patch_dom,smart_RRM_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM6	HGNC	ENSG00000004534				113	0	0	135	28	17.1779
RBM5	0	genome.wustl.edu	37	3	50150739	50150739	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	50150739	50150739	T	-	DEL	RBM5	ENST00000474470	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	RBM5	HGNC	ENSG00000003756				10	0	0	10	5	33.3333
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				43	0	0	43	14	24.5614
ENSG00000243696	0	genome.wustl.edu	37	3	52864443	52864443	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	52864443	52864443	T	-	DEL	ENSG00000243696	ENST00000513520	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP5-966M1.6	Clone_based_vega_gene	ENSG00000243696				32	0	0	27	8	22.8571
ROBO1	0	genome.wustl.edu	37	3	78666874	78666874	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	3	78666874	78666874	A	-	DEL	ROBO1	ENST00000464233	human	ensembl	74_37	-1	known	frame_shift_del	c.4193	p.F1398fs	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO1	HGNC	ENSG00000169855				54	0	0	56	13	18.8406
ADH5	0	genome.wustl.edu	37	4	100009873	100009874	+	RNA	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	100009873	100009874	-	G	INS	ADH5	ENST00000508146	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ADH5	HGNC	ENSG00000197894				118	0	0	114	21	15.5556
GSTCD	0	genome.wustl.edu	37	4	106755746	106755746	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	106755746	106755746	A	-	DEL	GSTCD	ENST00000360505	human	ensembl	74_37	+1	known	frame_shift_del	c.1659	p.S555fs	0.994	NULL	pfam_rRNA_ssu_MeTfrase_G,pfam_Small_mtfrase_dom,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	GSTCD	HGNC	ENSG00000138780				31	0	0	32	9	21.9512
LARP7	0	genome.wustl.edu	37	4	113578483	113578483	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	113578483	113578483	A	-	DEL	LARP7	ENST00000324052	human	ensembl	74_37	+1	known	frame_shift_del	c.1749	p.*583fs	1.000	NULL	pfam_RRM_3,pfam_Lupus_La_RNA-bd,pfam_RRM_dom,smart_Lupus_La_RNA-bd,smart_RRM_dom,pfscan_Lupus_La_RNA-bd,pfscan_RRM_dom,prints_Lupus_La	-	no_errors	LARP7	HGNC	ENSG00000174720				19	0	0	21	10	32.2581
IL21	0	genome.wustl.edu	37	4	123536892	123536892	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	123536892	123536892	T	-	DEL	IL21	ENST00000264497	human	ensembl	74_37	-1	known	frame_shift_del	c.305	p.K102fs	0.989	pfam_IL-15/IL-21_fam	pfam_IL-15/IL-21_fam	-	no_errors	IL21	HGNC	ENSG00000138684				62	0	0	65	17	20.7317
SCLT1	0	genome.wustl.edu	37	4	129869675	129869675	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	129869675	129869675	T	-	DEL	SCLT1	ENST00000281142	human	ensembl	74_37	-1	known	frame_shift_del	c.1269	p.A424fs	1.000	NULL	NULL	-	no_errors	SCLT1	HGNC	ENSG00000151466				41	0	0	36	8	18.1818
PCDH10	0	genome.wustl.edu	37	4	134071649	134071649	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	134071649	134071649	C	-	DEL	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	frame_shift_del	c.354	p.S121fs	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650				129	0	0	116	20	14.7059
ABCE1	0	genome.wustl.edu	37	4	146041224	146041224	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	146041224	146041224	A	-	DEL	ABCE1	ENST00000296577	human	ensembl	74_37	+1	known	frame_shift_del	c.1063	p.M357fs	1.000	pfscan_ABC_transporter-like	pfam_ABC_transporter-like,pfam_RNaseL-inhib_metal-bd_dom,pfam_4Fe4S-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,prints_ABC_E	-	no_errors	ABCE1	HGNC	ENSG00000164163				40	0	0	46	10	17.8571
FHDC1	0	genome.wustl.edu	37	4	153864507	153864507	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	153864507	153864507	T	-	DEL	FHDC1	ENST00000260008	human	ensembl	74_37	+1	known	frame_shift_del	c.298	p.W102fs	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,smart_FH2_Formin	-	no_errors	FHDC1	HGNC	ENSG00000137460				209	0	0	191	50	20.7469
RXFP1	0	genome.wustl.edu	37	4	159568122	159568123	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	159568122	159568123	-	A	INS	RXFP1	ENST00000307765	human	ensembl	74_37	+1	known	frame_shift_ins	c.1525_1526	p.Y511fs	1.000:1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_7TM,prints_Relaxin_rcpt,prints_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam	-	no_errors	RXFP1	HGNC	ENSG00000171509				50	0	0	41	10	19.6078
FNIP2	0	genome.wustl.edu	37	4	159789800	159789801	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	159789800	159789801	-	G	INS	FNIP2	ENST00000379346	human	ensembl	74_37	+1	known	frame_shift_ins	c.2081_2082	p.A696fs	0.000:0.000	NULL	NULL	-	no_errors	FNIP2	HGNC	ENSG00000052795				64	0	0	49	18	26.8657
CLCN3	0	genome.wustl.edu	37	4	170613460	170613460	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	170613460	170613460	A	-	DEL	CLCN3	ENST00000347613	human	ensembl	74_37	+1	known	frame_shift_del	c.925	p.R311fs	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-3	-	no_errors	CLCN3	HGNC	ENSG00000109572				80	0	0	81	21	20.5882
GALNTL6	0	genome.wustl.edu	37	4	173961169	173961170	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	173961169	173961170	CT	-	DEL	GALNTL6	ENST00000506823	human	ensembl	74_37	+1	known	frame_shift_del	c.1724_1725	p.S577fs	1.000:0.954	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNTL6	HGNC	ENSG00000174473				65	0	0	66	16	19.5122
HPGD	0	genome.wustl.edu	37	4	175439139	175439139	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	175439139	175439139	T	-	DEL	HPGD	ENST00000296522	human	ensembl	74_37	-1	known	frame_shift_del	c.307	p.T103fs	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_ADH_insect,prints_DHB_DH	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_Glc/ribitol_DH,prints_ADH_insect,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HPGD	HGNC	ENSG00000164120				20	0	0	27	11	28.9474
FAT1	0	genome.wustl.edu	37	4	187541247	187541247	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	187541247	187541247	A	-	DEL	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	frame_shift_del	c.6493	p.S2165fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				59	0	0	57	14	19.7183
FAT1	0	genome.wustl.edu	37	4	187541324	187541324	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	187541324	187541324	T	-	DEL	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	frame_shift_del	c.6416	p.K2139fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				97	0	0	68	21	23.5955
SLIT2	0	genome.wustl.edu	37	4	20512140	20512141	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	20512140	20512141	AA	-	DEL	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	frame_shift_del	c.937_938	p.K313fs	1.000:1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				99	0	0	83	21	20.1923
RBPJ	0	genome.wustl.edu	37	4	26426019	26426022	+	Frame_Shift_Del	DEL	AGTT	AGTT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AGTT	AGTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	26426019	26426022	AGTT	-	DEL	RBPJ	ENST00000342295	human	ensembl	74_37	+1	known	frame_shift_del	c.591_594	p.S199fs	1.000:1.000:1.000:1.000	pfam_Beta-trefoil_DNA-bd_dom,superfamily_Beta-trefoil_DNA-bd_dom	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,pfam_IPT,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJ	HGNC	ENSG00000168214				84	0	0	91	20	18.018
KLF3	0	genome.wustl.edu	37	4	38691476	38691476	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	38691476	38691476	C	-	DEL	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	frame_shift_del	c.671	p.P226fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787				139	0	0	116	41	26.1146
GUF1	0	genome.wustl.edu	37	4	44700615	44700615	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	44700615	44700615	A	-	DEL	GUF1	ENST00000281543	human	ensembl	74_37	+1	known	frame_shift_del	c.1927	p.K645fs	0.999	pfam_LepA_GTP-bd_C,tigrfam_EF-4	pfam_EF_GTP-bd_dom,pfam_LepA_GTP-bd_C,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,pfam_Small_GTPase,superfamily_P-loop_NTPase,superfamily_EFG_III-V,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom,tigrfam_EF-4,tigrfam_Small_GTP-bd_dom	-	no_errors	GUF1	HGNC	ENSG00000151806				41	0	0	53	15	22.0588
ENAM	0	genome.wustl.edu	37	4	71508434	71508435	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	71508434	71508435	-	A	INS	ENAM	ENST00000396073	human	ensembl	74_37	+1	known	frame_shift_ins	c.1291_1292	p.I433fs	0.869:0.899	NULL	NULL	-	no_errors	ENAM	HGNC	ENSG00000132464				105	0	0	95	22	18.8034
RUFY3	0	genome.wustl.edu	37	4	71660548	71660550	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	71660548	71660550	AAG	-	DEL	RUFY3	ENST00000381006	human	ensembl	74_37	+1	novel	in_frame_del	c.1494_1496	p.R500in_frame_del	0.862:0.783:0.214	NULL	pfam_Run,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,smart_Run,smart_Znf_FYVE,pfscan_Run	-	no_errors	RUFY3	HGNC	ENSG00000018189				166	0	0	181	40	18.0995
GRID2	0	genome.wustl.edu	37	4	93225752	93225753	+	RNA	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	4	93225752	93225753	-	A	INS	GRID2	ENST00000505687	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	GRID2	HGNC	ENSG00000152208				21	0	0	16	5	23.8095
SLC12A7	0	genome.wustl.edu	37	5	1074698	1074698	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	1074698	1074698	G	-	DEL	SLC12A7	ENST00000264930	human	ensembl	74_37	-1	known	frame_shift_del	c.2056	p.H686fs	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A7	HGNC	ENSG00000113504				89	0	0	66	18	21.4286
FBN2	0	genome.wustl.edu	37	5	127681221	127681221	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	127681221	127681221	G	-	DEL	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	frame_shift_del	c.3045	p.V1016fs	0.098	pirsf_FBN,pfam_TB_dom,superfamily_TB_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829				163	0	0	125	27	17.7632
UBE2B	0	genome.wustl.edu	37	5	133707248	133707248	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	133707248	133707248	T	-	DEL	UBE2B	ENST00000511807	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UBE2B	HGNC	ENSG00000119048				19	0	0	28	11	28.2051
NEUROG1	0	genome.wustl.edu	37	5	134870851	134870851	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	134870851	134870851	G	-	DEL	NEUROG1	ENST00000314744	human	ensembl	74_37	-1	known	frame_shift_del	c.530	p.P177fs	1.000	superfamily_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NEUROG1	HGNC	ENSG00000181965				51	0	0	36	16	30.7692
KLHL3	0	genome.wustl.edu	37	5	137013137	137013137	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	137013137	137013137	A	-	DEL	KLHL3	ENST00000510529	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	KLHL3	HGNC	ENSG00000146021				20	0	0	24	5	17.2414
PKD2L2	0	genome.wustl.edu	37	5	137244547	137244547	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	137244547	137244547	T	-	DEL	PKD2L2	ENST00000508883	human	ensembl	74_37	+1	known	frame_shift_del	c.1240	p.F415fs	1.000	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2	-	no_errors	PKD2L2	HGNC	ENSG00000078795				20	0	0	29	8	21.6216
NME5	0	genome.wustl.edu	37	5	137451362	137451362	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	137451362	137451362	T	-	DEL	NME5	ENST00000514481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NME5	HGNC	ENSG00000112981				37	0	0	19	27	58.6957
PSD2	0	genome.wustl.edu	37	5	139193288	139193288	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	139193288	139193288	G	-	DEL	PSD2	ENST00000274710	human	ensembl	74_37	+1	known	frame_shift_del	c.766	p.D258fs	0.076	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD2	HGNC	ENSG00000146005				47	0	0	20	5	20
SLC35A4	0	genome.wustl.edu	37	5	139947265	139947265	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	139947265	139947265	C	-	DEL	SLC35A4	ENST00000323146	human	ensembl	74_37	+1	known	frame_shift_del	c.511	p.P172fs	0.037	pfam_Nuc_sug_transpt,pirsf_UDP/CMP-sugar_transptr	pfam_Nuc_sug_transpt,pfam_DMT,pirsf_UDP/CMP-sugar_transptr	-	no_errors	SLC35A4	HGNC	ENSG00000176087				114	0	0	67	17	20.2381
WDR55	0	genome.wustl.edu	37	5	140049102	140049102	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140049102	140049102	A	-	DEL	WDR55	ENST00000358337	human	ensembl	74_37	+1	known	frame_shift_del	c.1015	p.K341fs	1.000	pirsf_WD_repeat_p55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_WD_repeat_p55,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR55	HGNC	ENSG00000120314				58	0	0	36	9	20
PCDHA12	0	genome.wustl.edu	37	5	140255609	140255609	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140255609	140255609	A	-	DEL	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	frame_shift_del	c.552	p.D187fs	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664				58	0	0	50	13	20.6349
SLC6A3	0	genome.wustl.edu	37	5	1403165	1403165	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	1403165	1403165	G	-	DEL	SLC6A3	ENST00000270349	human	ensembl	74_37	-1	known	frame_shift_del	c.1639	p.H547fs	0.931	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport_dopamine	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_dopamine	-	no_errors	SLC6A3	HGNC	ENSG00000142319				53	0	0	36	13	26.5306
DIAPH1	0	genome.wustl.edu	37	5	140953564	140953566	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	140953564	140953566	GGA	-	DEL	DIAPH1	ENST00000253811	human	ensembl	74_37	-1	known	in_frame_del	c.1853_1851	p.P620in_frame_del	0.010:0.008:0.007	pfam_Formin_homology_1	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Formin_homology_1,pfam_Drf_DAD,superfamily_ARM-type_fold,superfamily_tRNA-bd_arm,smart_FH2_Formin	-	no_errors	DIAPH1	HGNC	ENSG00000131504				14	0	0	13	4	23.5294
TRIO	0	genome.wustl.edu	37	5	14462953	14462953	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	14462953	14462953	G	-	DEL	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	frame_shift_del	c.5586	p.A1864fs	1.000	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382				101	0	0	82	21	20.3883
RBM27	0	genome.wustl.edu	37	5	145647320	145647320	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	145647320	145647320	A	-	DEL	RBM27	ENST00000265271	human	ensembl	74_37	+1	known	frame_shift_del	c.2440	p.K816fs	1.000	NULL	pfam_PWI_dom,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009				49	0	0	52	14	21.2121
STK32A	0	genome.wustl.edu	37	5	146754724	146754725	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	146754724	146754725	-	A	INS	STK32A	ENST00000397936	human	ensembl	74_37	+1	known	frame_shift_ins	c.975_976	p.R328fs	1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK32A	HGNC	ENSG00000169302				15	0	0	20	5	20
SYNPO	0	genome.wustl.edu	37	5	150028582	150028582	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	150028582	150028582	G	-	DEL	SYNPO	ENST00000394243	human	ensembl	74_37	+1	known	frame_shift_del	c.1477	p.G494fs	0.037	NULL	NULL	-	no_errors	SYNPO	HGNC	ENSG00000171992				126	0	0	89	16	15.2381
TRIM41	0	genome.wustl.edu	37	5	180661717	180661718	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	180661717	180661718	GT	-	DEL	TRIM41	ENST00000315073	human	ensembl	74_37	+1	known	frame_shift_del	c.1835_1836	p.V613fs	0.921:0.885	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,pfam_DUF3631,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM41	HGNC	ENSG00000146063				172	0	0	131	25	16.0256
LOC101928649	0	genome.wustl.edu	37	5	180684515	180684516	+	RNA	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	180684515	180684516	-	T	INS	LOC101928649	ENST00000417281	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.030:0.042	-	-	-	no_errors	CTC-338M12.4	Clone_based_vega_gene	ENSG00000233937				19	0	0	21	5	19.2308
DROSHA	0	genome.wustl.edu	37	5	31401568	31401569	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	31401568	31401569	-	CT	INS	DROSHA	ENST00000344624	human	ensembl	74_37	-1	known	frame_shift_ins	c.4096_4095	p.P1365fs	1.000:1.000	NULL	pfam_RNase_III_dom,pfam_dsRNA-bd_dom,superfamily_RNase_III_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DROSHA	HGNC	ENSG00000113360				117	0	0	105	16	13.2231
PDZD2	0	genome.wustl.edu	37	5	32087802	32087802	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	32087802	32087802	A	-	DEL	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	frame_shift_del	c.4248	p.S1419fs	0.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				63	0	0	56	12	17.6471
NIPBL	0	genome.wustl.edu	37	5	36995693	36995693	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	36995693	36995693	T	-	DEL	NIPBL	ENST00000503274	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.879	-	-	-	no_errors	NIPBL	HGNC	ENSG00000164190				25	0	0	28	13	31.7073
IL6ST	0	genome.wustl.edu	37	5	55247869	55247869	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	55247869	55247869	T	-	DEL	IL6ST	ENST00000336909	human	ensembl	74_37	-1	known	frame_shift_del	c.1587	p.V530fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_IgC2-like_lig-bd,pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,pfam_Growth/epo_recpt_lig-bind,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL6ST	HGNC	ENSG00000134352				27	0	0	30	8	21.0526
ERBB2IP	0	genome.wustl.edu	37	5	65370919	65370920	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	65370919	65370920	-	C	INS	ERBB2IP	ENST00000284037	human	ensembl	74_37	+1	known	frame_shift_ins	c.3824_3825	p.Q1278fs	1.000:1.000	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	ERBB2IP	HGNC	ENSG00000112851				108	0	0	116	36	23.6842
PAPD4	0	genome.wustl.edu	37	5	78938656	78938657	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	78938656	78938657	-	T	INS	PAPD4	ENST00000296783	human	ensembl	74_37	+1	known	frame_shift_ins	c.674_675	p.Q228fs	0.846:0.988	NULL	pfam_PAP_assoc	-	no_errors	PAPD4	HGNC	ENSG00000164329				20	0	0	19	10	34.4828
CMYA5	0	genome.wustl.edu	37	5	79031458	79031458	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	79031458	79031458	A	-	DEL	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	frame_shift_del	c.6870	p.E2293fs	0.000	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309				104	0	0	107	27	20.1493
MSH3	0	genome.wustl.edu	37	5	79970915	79970915	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	79970915	79970915	A	-	DEL	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	frame_shift_del	c.1141	p.K383fs	0.982	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318				104	0	0	99	51	34
SSBP2	0	genome.wustl.edu	37	5	80932421	80932421	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	80932421	80932421	T	-	DEL	SSBP2	ENST00000320672	human	ensembl	74_37	-1	known	frame_shift_del	c.152	p.N51fs	1.000	prints_SSDP_DNA-bd	smart_LisH_dimerisation,pfscan_LisH_dimerisation,prints_SSDP_DNA-bd	-	no_errors	SSBP2	HGNC	ENSG00000145687				54	0	0	57	19	25
GPR98	0	genome.wustl.edu	37	5	89921010	89921010	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	89921010	89921010	C	-	DEL	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	frame_shift_del	c.622	p.P209fs	1.000	pfam_Calx_beta,smart_Calx_beta	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				28	0	0	38	8	17.3913
ERAP2	0	genome.wustl.edu	37	5	96224963	96224963	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	5	96224963	96224963	T	-	DEL	ERAP2	ENST00000437043	human	ensembl	74_37	+1	known	frame_shift_del	c.924	p.Y310fs	0.431	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ERAP2	HGNC	ENSG00000164308				72	0	0	63	20	24.0964
ENSG00000271730	0	genome.wustl.edu	37	6	109319968	109319970	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	109319968	109319970	AAA	-	DEL	ENSG00000271730	ENST00000605885	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	RP11-787I22.3	Clone_based_vega_gene	ENSG00000271730				53	0	0	42	9	17.6471
SYCP2L	0	genome.wustl.edu	37	6	10935386	10935386	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	10935386	10935386	T	-	DEL	SYCP2L	ENST00000283141	human	ensembl	74_37	+1	known	frame_shift_del	c.1779	p.L595fs	0.002	NULL	NULL	-	no_errors	SYCP2L	HGNC	ENSG00000153157				33	0	0	34	13	27.6596
SLC22A16	0	genome.wustl.edu	37	6	110746117	110746117	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	110746117	110746117	T	-	DEL	SLC22A16	ENST00000368919	human	ensembl	74_37	-1	known	frame_shift_del	c.1693	p.T565fs	0.000	NULL	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A16	HGNC	ENSG00000004809				135	0	0	104	27	20.6107
KIAA1919	0	genome.wustl.edu	37	6	111587361	111587361	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	111587361	111587361	T	-	DEL	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	frame_shift_del	c.596	p.C202fs	0.469	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214				37	0	0	39	6	13.3333
ADTRP	0	genome.wustl.edu	37	6	11714640	11714643	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	11714640	11714643	AAAA	-	DEL	ADTRP	ENST00000512139	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.001:0.000	-	-	-	no_errors	ADTRP	HGNC	ENSG00000111863				23	0	0	22	10	31.25
FAM184A	0	genome.wustl.edu	37	6	119324113	119324113	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	119324113	119324113	T	-	DEL	FAM184A	ENST00000338891	human	ensembl	74_37	-1	known	frame_shift_del	c.2039	p.N680fs	1.000	NULL	superfamily_Prefoldin	-	no_errors	FAM184A	HGNC	ENSG00000111879				64	0	0	85	22	20.5607
ALDH8A1	0	genome.wustl.edu	37	6	135239640	135239640	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	135239640	135239640	C	-	DEL	ALDH8A1	ENST00000265605	human	ensembl	74_37	-1	known	frame_shift_del	c.1377	p.M460fs	0.739	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH8A1	HGNC	ENSG00000118514				48	0	0	43	14	24.5614
STXBP5	0	genome.wustl.edu	37	6	147680408	147680408	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	147680408	147680408	C	-	DEL	STXBP5	ENST00000321680	human	ensembl	74_37	+1	known	frame_shift_del	c.2494	p.P833fs	1.000	superfamily_WD40_repeat_dom	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C_dom,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5	HGNC	ENSG00000164506				62	0	0	63	19	23.1707
JARID2	0	genome.wustl.edu	37	6	15496722	15496722	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	15496722	15496722	G	-	DEL	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	frame_shift_del	c.1266	p.R425fs	0.963	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				109	0	0	75	26	25.7426
JARID2	0	genome.wustl.edu	37	6	15513220	15513220	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	15513220	15513220	A	-	DEL	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	frame_shift_del	c.3210	p.E1073fs	0.269	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				242	0	0	147	38	20.5405
SYNJ2	0	genome.wustl.edu	37	6	158508009	158508009	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	158508009	158508009	C	-	DEL	SYNJ2	ENST00000355585	human	ensembl	74_37	+1	known	frame_shift_del	c.3331	p.P1113fs	1.000	NULL	pfam_Syja_N,pfam_DUF1866,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ2	HGNC	ENSG00000078269				69	0	0	59	11	15.7143
PLG	0	genome.wustl.edu	37	6	161132209	161132210	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	161132209	161132210	-	C	INS	PLG	ENST00000308192	human	ensembl	74_37	+1	known	frame_shift_ins	c.393_394	p.H132fs	0.999:1.000	pirsf_Pept_S1A_plasmin,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Pept_S1A_plasmin,pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	PLG	HGNC	ENSG00000122194				62	0	0	56	13	18.8406
RBM24	0	genome.wustl.edu	37	6	17292449	17292450	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	17292449	17292450	AA	-	DEL	RBM24	ENST00000508508	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.915:0.719	-	-	-	no_errors	RBM24	HGNC	ENSG00000112183				35	0	0	25	9	26.4706
HIST1H2BG	0	genome.wustl.edu	37	6	26216833	26216835	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	26216833	26216835	CTT	-	DEL	HIST1H2BG	ENST00000244601	human	ensembl	74_37	-1	known	in_frame_del	c.39_37	p.K13in_frame_del	1.000:1.000:1.000	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BG	HGNC	ENSG00000187990				121	0	0	122	25	17.0068
NKAPL	0	genome.wustl.edu	37	6	28227519	28227520	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	28227519	28227520	GA	-	DEL	NKAPL	ENST00000343684	human	ensembl	74_37	+1	known	frame_shift_del	c.370_371	p.R127fs	0.996:1.000	NULL	pfam_DUF926	-	no_errors	NKAPL	HGNC	ENSG00000189134				159	0	0	152	27	15.0838
GPX5	0	genome.wustl.edu	37	6	28502011	28502011	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	28502011	28502011	A	-	DEL	GPX5	ENST00000442674	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPX5	HGNC	ENSG00000224586				14	0	0	6	10	62.5
HLA-A	0	genome.wustl.edu	37	6	29912156	29912156	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	29912156	29912156	C	-	DEL	HLA-A	ENST00000376806	human	ensembl	74_37	+1	known	frame_shift_del	c.877	p.L294fs	0.967	pfam_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-A	HGNC	ENSG00000206503				90	0	0	75	20	21.0526
DHX16	0	genome.wustl.edu	37	6	30622578	30622581	+	Frame_Shift_Del	DEL	CTGT	CTGT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	CTGT	CTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	30622578	30622581	CTGT	-	DEL	DHX16	ENST00000376442	human	ensembl	74_37	-1	known	frame_shift_del	c.2902_2899	p.T967fs	1.000:0.286:0.999:1.000	pfam_DUF1605,superfamily_P-loop_NTPase	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX16	HGNC	ENSG00000204560				58	0	0	47	12	20.339
HLA-B	0	genome.wustl.edu	37	6	31324568	31324568	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	31324568	31324568	C	-	DEL	HLA-B	ENST00000412585	human	ensembl	74_37	-1	known	frame_shift_del	c.240	p.P81fs	0.750	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-B	HGNC	ENSG00000234745				59	0	0	56	4	6.66667
LSM2	0	genome.wustl.edu	37	6	31765402	31765402	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	31765402	31765402	A	-	DEL	LSM2	ENST00000470083	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LSM2	HGNC	ENSG00000204392				28	0	0	16	13	44.8276
ZBTB12	0	genome.wustl.edu	37	6	31868388	31868388	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	31868388	31868388	C	-	DEL	ZBTB12	ENST00000375527	human	ensembl	74_37	-1	known	frame_shift_del	c.695	p.G232fs	0.012	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB12	HGNC	ENSG00000204366				93	0	0	87	22	20.1835
CYP21A2	0	genome.wustl.edu	37	6	32007960	32007960	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	32007960	32007960	T	-	DEL	CYP21A2	ENST00000418967	human	ensembl	74_37	+1	known	frame_shift_del	c.917	p.L308fs	0.382	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP21A2	HGNC	ENSG00000231852				269	1	0.37037	217	48	18.1132
RGL2	0	genome.wustl.edu	37	6	33263964	33263965	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	33263964	33263965	-	C	INS	RGL2	ENST00000497454	human	ensembl	74_37	-1	known	frame_shift_ins	c.609_608	p.S204fs	1.000:1.000	superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL2	HGNC	ENSG00000237441				287	1	0.347222	280	48	14.6341
FANCE	0	genome.wustl.edu	37	6	35423794	35423794	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	35423794	35423794	G	-	DEL	FANCE	ENST00000229769	human	ensembl	74_37	+1	known	frame_shift_del	c.519	p.G175fs	0.003	NULL	pfam_Fanconi_anaemia_gr_E_prot_C	-	no_errors	FANCE	HGNC	ENSG00000112039				56	0	0	25	6	19.3548
TRERF1	0	genome.wustl.edu	37	6	42236161	42236161	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	42236161	42236161	G	-	DEL	TRERF1	ENST00000541110	human	ensembl	74_37	-1	known	frame_shift_del	c.1168	p.L390fs	0.962	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	TRERF1	HGNC	ENSG00000124496				173	0	0	116	27	18.8811
MUT	0	genome.wustl.edu	37	6	49427151	49427151	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	49427151	49427151	A	-	DEL	MUT	ENST00000274813	human	ensembl	74_37	-1	known	frame_shift_del	c.29	p.L10fs	0.001	NULL	pfam_MeMalonylCoA_mutase_a/b_cat,pfam_Cobalamin-bd,superfamily_Cbl-dep_enz_cat,superfamily_Cobalamin-bd,tigrfam_MMCoA_mutase_a_cat,tigrfam_Acid_CoA_mut_C	-	no_errors	MUT	HGNC	ENSG00000146085				53	0	0	48	11	18.6441
DST	0	genome.wustl.edu	37	6	56382365	56382365	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	56382365	56382365	T	-	DEL	DST	ENST00000370754	human	ensembl	74_37	-1	known	frame_shift_del	c.18090	p.K6030fs	1.000	pfam_Spectrin_repeat,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				34	0	0	25	5	16.6667
UBE3D	0	genome.wustl.edu	37	6	83602713	83602713	+	RNA	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	83602713	83602713	G	-	DEL	UBE3D	ENST00000503942	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	UBE3D	HGNC	ENSG00000118420				69	0	0	57	15	20.8333
ZNF292	0	genome.wustl.edu	37	6	87967280	87967280	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	87967280	87967280	G	-	DEL	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	frame_shift_del	c.3933	p.G1313fs	0.994	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994				15	0	0	15	6	28.5714
C6orf165	0	genome.wustl.edu	37	6	88144700	88144700	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	88144700	88144700	A	-	DEL	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	frame_shift_del	c.1423	p.N477fs	1.000	pfam_DUF3508	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514				22	0	0	40	5	11.1111
RARS2	0	genome.wustl.edu	37	6	88229955	88229955	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	88229955	88229955	T	-	DEL	RARS2	ENST00000369536	human	ensembl	74_37	-1	known	frame_shift_del	c.1055	p.K352fs	0.001	pfam_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	-	no_errors	RARS2	HGNC	ENSG00000146282				142	0	0	154	42	21.4286
MDN1	0	genome.wustl.edu	37	6	90415853	90415853	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	90415853	90415853	A	-	DEL	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	frame_shift_del	c.8073	p.F2691fs	1.000	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				49	0	0	75	8	9.63855
MAP3K7	0	genome.wustl.edu	37	6	91226170	91226170	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	91226170	91226170	A	-	DEL	MAP3K7	ENST00000479630	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.947	-	-	-	no_errors	MAP3K7	HGNC	ENSG00000135341				19	0	0	14	11	44
POU3F2	0	genome.wustl.edu	37	6	99284028	99284028	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	6	99284028	99284028	G	-	DEL	POU3F2	ENST00000328345	human	ensembl	74_37	+1	known	frame_shift_del	c.1279	p.S429fs	1.000	pirsf_Transcription_factor_POU	pirsf_Transcription_factor_POU,pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F2	HGNC	ENSG00000184486				77	0	0	63	8	11.2676
ZCWPW1	0	genome.wustl.edu	37	7	100017294	100017294	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	100017294	100017294	T	-	DEL	ZCWPW1	ENST00000398027	human	ensembl	74_37	-1	known	frame_shift_del	c.241	p.R81fs	0.014	NULL	pfam_Znf_CW,pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_CW	-	no_errors	ZCWPW1	HGNC	ENSG00000078487				63	0	0	67	16	19.2771
NYAP1	0	genome.wustl.edu	37	7	100085906	100085906	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	100085906	100085906	G	-	DEL	NYAP1	ENST00000423930	human	ensembl	74_37	+1	known	frame_shift_del	c.562	p.N190fs	1.000	NULL	NULL	-	no_errors	NYAP1	HGNC	ENSG00000166924				156	0	0	129	25	16.2338
GIGYF1	0	genome.wustl.edu	37	7	100285170	100285170	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	100285170	100285170	G	-	DEL	GIGYF1	ENST00000275732	human	ensembl	74_37	-1	known	frame_shift_del	c.331	p.L111fs	0.025	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830				63	0	0	33	15	31.25
COX19	0	genome.wustl.edu	37	7	1009016	1009017	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	1009016	1009017	-	T	INS	COX19	ENST00000344111	human	ensembl	74_37	-1	known	frame_shift_ins	c.271_270	p.*90fs	0.000:0.000	NULL	pfam_CHCH,superfamily_Cys_alpha_HP_mot_SF	-	no_errors	COX19	HGNC	ENSG00000240230				397	0	0	293	66	18.3844
CUX1	0	genome.wustl.edu	37	7	101870751	101870751	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	101870751	101870751	C	-	DEL	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	frame_shift_del	c.3268	p.I1092fs	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923				99	0	0	104	26	20
DNAJC2	0	genome.wustl.edu	37	7	102964991	102964992	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	102964991	102964992	-	T	INS	DNAJC2	ENST00000379263	human	ensembl	74_37	-1	known	frame_shift_ins	c.591_590	p.N197fs	1.000:1.000	NULL	pfam_SANT/Myb,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_Homeodomain-like,smart_DnaJ_domain,smart_SANT/Myb,pfscan_Myb-like_dom,pfscan_DnaJ_domain	-	no_errors	DNAJC2	HGNC	ENSG00000105821				34	0	0	42	8	16
C7orf50	0	genome.wustl.edu	37	7	1037311	1037312	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	1037311	1037312	GG	-	DEL	C7orf50	ENST00000357429	human	ensembl	74_37	-1	known	frame_shift_del	c.535_534	p.L179fs	0.001:0.000	NULL	pfam_DUF2373	-	no_errors	C7orf50	HGNC	ENSG00000146540				46	0	0	34	9	20.9302
ORC5	0	genome.wustl.edu	37	7	103844680	103844681	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	103844680	103844681	TC	-	DEL	ORC5	ENST00000297431	human	ensembl	74_37	-1	known	frame_shift_del	c.75_74	p.R25fs	0.968:1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	ORC5	HGNC	ENSG00000164815				19	0	0	24	7	22.5806
KMT2E	0	genome.wustl.edu	37	7	104746985	104746985	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	104746985	104746985	A	-	DEL	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	frame_shift_del	c.2613	p.K873fs	0.999	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483				53	0	0	56	10	15.1515
WNT16	0	genome.wustl.edu	37	7	120971879	120971879	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	120971879	120971879	G	-	DEL	WNT16	ENST00000222462	human	ensembl	74_37	+1	known	frame_shift_del	c.494	p.G167fs	1.000	pfam_Wnt,smart_Wnt,prints_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt16,prints_Wnt	-	no_errors	WNT16	HGNC	ENSG00000002745				80	0	0	71	14	16.4706
PTPRZ1	0	genome.wustl.edu	37	7	121674154	121674157	+	Frame_Shift_Del	DEL	GAAA	GAAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	GAAA	GAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	121674154	121674157	GAAA	-	DEL	PTPRZ1	ENST00000393386	human	ensembl	74_37	+1	known	frame_shift_del	c.5172_5175	p.K1725fs	1.000:1.000:1.000:1.000	smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRZ1	HGNC	ENSG00000106278				43	0	0	40	16	28.5714
ZNF800	0	genome.wustl.edu	37	7	127013759	127013759	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	127013759	127013759	T	-	DEL	ZNF800	ENST00000265827	human	ensembl	74_37	-1	known	frame_shift_del	c.1631	p.K544fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF800	HGNC	ENSG00000048405				66	0	0	74	11	12.9412
OR2A12	0	genome.wustl.edu	37	7	143792462	143792462	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	143792462	143792462	A	-	DEL	OR2A12	ENST00000408949	human	ensembl	74_37	+1	known	frame_shift_del	c.262	p.V90fs	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2A12	HGNC	ENSG00000221858				63	0	0	50	19	27.5362
KCNH2	0	genome.wustl.edu	37	7	150656679	150656679	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	150656679	150656679	G	-	DEL	KCNH2	ENST00000262186	human	ensembl	74_37	-1	known	frame_shift_del	c.453	p.T152fs	0.998	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118				84	0	0	66	12	15.3846
KMT2C	0	genome.wustl.edu	37	7	151874147	151874148	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	151874147	151874148	-	T	INS	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	frame_shift_ins	c.8391_8390	p.E2798fs	0.017:0.019	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				74	0	0	68	12	15
PTPRN2	0	genome.wustl.edu	37	7	157959769	157959769	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	157959769	157959769	G	-	DEL	PTPRN2	ENST00000404321	human	ensembl	74_37	-1	known	frame_shift_del	c.833	p.P278fs	0.001	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRN2	HGNC	ENSG00000155093				26	0	0	20	9	31.0345
ITGB8	0	genome.wustl.edu	37	7	20371449	20371450	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	20371449	20371450	-	T	INS	ITGB8	ENST00000222573	human	ensembl	74_37	+1	known	frame_shift_ins	c.20_21	p.T10fs	0.625:0.529	pirsf_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_EGF_extracell,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB8	HGNC	ENSG00000105855				63	0	0	54	10	15.625
CARD11	0	genome.wustl.edu	37	7	2968323	2968323	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	2968323	2968323	G	-	DEL	CARD11	ENST00000396946	human	ensembl	74_37	-1	known	frame_shift_del	c.1663	p.R555fs	0.080	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD	-	no_errors	CARD11	HGNC	ENSG00000198286				99	0	0	79	16	16.8421
C7orf10	0	genome.wustl.edu	37	7	40899961	40899962	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	40899961	40899962	-	C	INS	C7orf10	ENST00000309930	human	ensembl	74_37	+1	known	frame_shift_ins	c.1299_1300	p.L435fs	0.085:0.996	superfamily_CoA-Trfase_III_dom	pfam_CoA-Trfase_fam_III,superfamily_CoA-Trfase_III_dom	-	no_errors	C7orf10	HGNC	ENSG00000175600				185	0	0	210	42	16.6667
OGDH	0	genome.wustl.edu	37	7	44706400	44706400	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	44706400	44706400	G	-	DEL	OGDH	ENST00000222673	human	ensembl	74_37	+1	known	frame_shift_del	c.583	p.G196fs	1.000	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_DH_E1,pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	OGDH	HGNC	ENSG00000105953				118	0	0	86	29	25.2174
SBDS	0	genome.wustl.edu	37	7	66458406	66458407	+	Splice_Site	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	66458406	66458407	-	A	INS	SBDS	ENST00000246868	human	ensembl	74_37	-1	known	splice_site_ins	c.259-3_259-2	e3-2	0.945:0.822	-	-	-	no_errors	SBDS	HGNC	ENSG00000126524				39	0	0	37	6	13.9535
TMEM60	0	genome.wustl.edu	37	7	77423459	77423460	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	77423459	77423460	-	T	INS	TMEM60	ENST00000257663	human	ensembl	74_37	-1	known	frame_shift_ins	c.232_231	p.A77fs	0.998:0.998	NULL	pfam_TM_Fragile-X-F-assoc	-	no_errors	TMEM60	HGNC	ENSG00000135211				108	0	0	124	13	9.48905
C7orf63	0	genome.wustl.edu	37	7	89929188	89929188	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	89929188	89929188	A	-	DEL	C7orf63	ENST00000389297	human	ensembl	74_37	+1	known	frame_shift_del	c.1865	p.K624fs	0.996	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	C7orf63	HGNC	ENSG00000105792				14	0	0	17	6	26.087
MTERF	0	genome.wustl.edu	37	7	91509436	91509437	+	RNA	INS	-	-	AC			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	91509436	91509437	-	AC	INS	MTERF	ENST00000481516	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.000	-	-	-	no_errors	MTERF	HGNC	ENSG00000127989				44	0	0	38	7	15.5556
SAMD9	0	genome.wustl.edu	37	7	92735257	92735258	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	92735257	92735258	-	T	INS	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	frame_shift_ins	c.154_153	p.E51fs	0.015:0.149	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413				51	0	0	89	17	16.0377
SAMD9L	0	genome.wustl.edu	37	7	92760738	92760738	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	92760738	92760738	T	-	DEL	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	frame_shift_del	c.4547	p.N1516fs	0.000	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409				63	0	0	62	17	21.519
CASD1	0	genome.wustl.edu	37	7	94185017	94185017	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	94185017	94185017	T	-	DEL	CASD1	ENST00000297273	human	ensembl	74_37	+1	known	frame_shift_del	c.2341	p.C783fs	0.986	NULL	pfam_Cas1_AcylTrans_dom,superfamily_Cyclin-like	-	no_errors	CASD1	HGNC	ENSG00000127995				60	0	0	40	17	29.8246
GAL3ST4	0	genome.wustl.edu	37	7	99758316	99758316	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	7	99758316	99758316	G	-	DEL	GAL3ST4	ENST00000360039	human	ensembl	74_37	-1	known	frame_shift_del	c.696	p.R233fs	0.000	NULL	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST4	HGNC	ENSG00000197093				181	1	0.549451	176	40	18.5185
POLR2K	0	genome.wustl.edu	37	8	101164033	101164033	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	101164033	101164033	T	-	DEL	POLR2K	ENST00000519765	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	POLR2K	HGNC	ENSG00000147669				17	0	0	21	8	27.5862
NACAP1	0	genome.wustl.edu	37	8	102381883	102381883	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	102381883	102381883	A	-	DEL	NACAP1	ENST00000419462	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.879	-	-	-	no_errors	NACAP1	HGNC	ENSG00000228224				13	0	0	22	5	18.5185
DCAF13	0	genome.wustl.edu	37	8	104439487	104439487	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	104439487	104439487	T	-	DEL	DCAF13	ENST00000519682	human	ensembl	74_37	+1	putative	frame_shift_del	c.619	p.F209fs	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF13	HGNC	ENSG00000164934				15	0	0	34	7	17.0732
DLC1	0	genome.wustl.edu	37	8	12957359	12957359	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	12957359	12957359	G	-	DEL	DLC1	ENST00000276297	human	ensembl	74_37	-1	known	frame_shift_del	c.2487	p.S830fs	0.000	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741				124	0	0	154	24	13.4831
KCNQ3	0	genome.wustl.edu	37	8	133150233	133150233	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	133150233	133150233	T	-	DEL	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	frame_shift_del	c.1599	p.K533fs	0.715	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156				107	0	0	122	16	11.5942
ZC3H3	0	genome.wustl.edu	37	8	144522437	144522437	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	144522437	144522437	C	-	DEL	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	frame_shift_del	c.2589	p.S864fs	0.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164				18	0	0	18	3	14.2857
CPSF1	0	genome.wustl.edu	37	8	145620725	145620726	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	145620725	145620726	AT	-	DEL	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	frame_shift_del	c.3021_3020	p.Y1007fs	0.995:1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894				58	0	0	62	12	16.2162
ADAM28	0	genome.wustl.edu	37	8	24167472	24167473	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	24167472	24167473	-	A	INS	ADAM28	ENST00000265769	human	ensembl	74_37	+1	known	frame_shift_ins	c.216_217	p.N74fs	1.000:1.000	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM28	HGNC	ENSG00000042980				64	0	0	98	9	8.41121
GTF2E2	0	genome.wustl.edu	37	8	30511074	30511074	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	30511074	30511074	T	-	DEL	GTF2E2	ENST00000355904	human	ensembl	74_37	-1	known	frame_shift_del	c.42	p.K14fs	1.000	pirsf_TFIIE-bsu	pfam_TFIIE_bsu_DNA-bd,pirsf_TFIIE-bsu	-	no_errors	GTF2E2	HGNC	ENSG00000197265				46	0	0	67	12	15.1899
TEX15	0	genome.wustl.edu	37	8	30699601	30699601	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	30699601	30699601	T	-	DEL	TEX15	ENST00000256246	human	ensembl	74_37	-1	known	frame_shift_del	c.6933	p.K2311fs	0.716	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863				53	0	0	82	14	14.5833
MCM4	0	genome.wustl.edu	37	8	48883979	48883979	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	48883979	48883979	A	-	DEL	MCM4	ENST00000262105	human	ensembl	74_37	+1	known	frame_shift_del	c.1879	p.T629fs	1.000	pfam_MCM_DNA-dep_ATPase,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM4	HGNC	ENSG00000104738				65	0	0	70	6	7.89474
RGS20	0	genome.wustl.edu	37	8	54791966	54791966	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	54791966	54791966	C	-	DEL	RGS20	ENST00000297313	human	ensembl	74_37	+1	known	frame_shift_del	c.314	p.L107fs	0.616	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS20	HGNC	ENSG00000147509				81	0	0	83	20	19.4175
SOX17	0	genome.wustl.edu	37	8	55372288	55372288	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	55372288	55372288	C	-	DEL	SOX17	ENST00000297316	human	ensembl	74_37	+1	known	frame_shift_del	c.978	p.P328fs	0.981	pfam_Sox_C_TAD	pfam_Sox_C_TAD,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX17	HGNC	ENSG00000164736				16	0	0	17	2	10.5263
MYBL1	0	genome.wustl.edu	37	8	67488453	67488453	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	67488453	67488453	T	-	DEL	MYBL1	ENST00000522677	human	ensembl	74_37	-1	known	frame_shift_del	c.1259	p.N420fs	0.992	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697				141	0	0	191	52	21.3992
CSPP1	0	genome.wustl.edu	37	8	68076631	68076631	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	68076631	68076631	A	-	DEL	CSPP1	ENST00000262210	human	ensembl	74_37	+1	known	frame_shift_del	c.2701	p.N903fs	1.000	NULL	NULL	-	no_errors	CSPP1	HGNC	ENSG00000104218				47	0	0	78	10	11.3636
ARFGEF1	0	genome.wustl.edu	37	8	68128855	68128856	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	68128855	68128856	-	G	INS	ARFGEF1	ENST00000262215	human	ensembl	74_37	-1	known	frame_shift_ins	c.4656_4655	p.P1553fs	0.000:0.000	NULL	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF1	HGNC	ENSG00000066777				71	0	0	90	11	10.8911
KCNB2	0	genome.wustl.edu	37	8	73480455	73480457	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	73480455	73480457	AGA	-	DEL	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	in_frame_del	c.486_488	p.E163in_frame_del	0.483:1.000:1.000	NULL	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				224	0	0	297	28	8.61538
ZFHX4	0	genome.wustl.edu	37	8	77617140	77617140	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	77617140	77617140	A	-	DEL	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	frame_shift_del	c.817	p.R274fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				60	0	0	75	15	16.6667
ZC2HC1A	0	genome.wustl.edu	37	8	79590798	79590798	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	79590798	79590798	A	-	DEL	ZC2HC1A	ENST00000263849	human	ensembl	74_37	+1	known	frame_shift_del	c.94	p.K33fs	1.000	NULL	NULL	-	no_errors	ZC2HC1A	HGNC	ENSG00000104427				111	0	0	156	27	14.7541
UQCRB	0	genome.wustl.edu	37	8	97243309	97243310	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	8	97243309	97243310	-	T	INS	UQCRB	ENST00000287022	human	ensembl	74_37	-1	known	frame_shift_ins	c.310_309	p.E103fs	1.000:0.994	pfam_QCR7,superfamily_QCR7	pfam_QCR7,superfamily_QCR7	-	no_errors	UQCRB	HGNC	ENSG00000156467				96	0	0	117	18	13.3333
MVB12B	0	genome.wustl.edu	37	9	129243627	129243627	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	129243627	129243627	T	-	DEL	MVB12B	ENST00000485886	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MVB12B	HGNC	ENSG00000196814				134	0	0	94	26	21.6667
ZBTB34	0	genome.wustl.edu	37	9	129641782	129641783	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	129641782	129641783	TA	-	DEL	ZBTB34	ENST00000319119	human	ensembl	74_37	+1	known	frame_shift_del	c.104_105	p.C36fs	1.000:0.980	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB34	HGNC	ENSG00000177125				146	0	0	128	39	23.3533
SH3GLB2	0	genome.wustl.edu	37	9	131771467	131771467	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	131771467	131771467	G	-	DEL	SH3GLB2	ENST00000372554	human	ensembl	74_37	-1	known	frame_shift_del	c.1025	p.P342fs	0.450	superfamily_SH3_domain	pfam_BAR_dom,pfam_BAR_dom-cont,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain	-	no_errors	SH3GLB2	HGNC	ENSG00000148341				31	0	0	18	7	28
FNBP1	0	genome.wustl.edu	37	9	132678318	132678318	+	RNA	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	132678318	132678318	A	-	DEL	FNBP1	ENST00000462766	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FNBP1	HGNC	ENSG00000187239				23	0	0	23	3	11.5385
ASS1	0	genome.wustl.edu	37	9	133329755	133329755	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	133329755	133329755	A	-	DEL	ASS1	ENST00000352480	human	ensembl	74_37	+1	known	frame_shift_del	c.169	p.K58fs	1.000	pfam_Arginosuc_synth,pfam_QueC,tigrfam_Arginosuc_synth	pfam_Arginosuc_synth,pfam_QueC,tigrfam_Arginosuc_synth	-	no_errors	ASS1	HGNC	ENSG00000130707				33	0	0	39	11	22
LAMC3	0	genome.wustl.edu	37	9	133932467	133932467	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	133932467	133932467	G	-	DEL	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	frame_shift_del	c.2091	p.G699fs	0.003	smart_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555				185	0	0	123	32	20.6452
CNTLN	0	genome.wustl.edu	37	9	17135271	17135271	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	17135271	17135271	G	-	DEL	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	frame_shift_del	c.208	p.A72fs	0.002	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459				14	0	0	20	6	23.0769
FOCAD	0	genome.wustl.edu	37	9	20912931	20912931	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	20912931	20912931	A	-	DEL	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	frame_shift_del	c.2785	p.S931fs	1.000	superfamily_ARM-type_fold	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				30	0	0	30	7	18.9189
CDKN2A	0	genome.wustl.edu	37	9	21971088	21971089	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	21971088	21971089	-	A	INS	CDKN2A	ENST00000361570	human	ensembl	74_37	-1	known	frame_shift_ins	c.436_435	p.P145fs	1.000:1.000	NULL	pfam_Cyclin_kinase-Inhib_2A	-	no_errors	CDKN2A	HGNC	ENSG00000147889				60	0	0	65	15	18.75
TAF1L	0	genome.wustl.edu	37	9	32633583	32633584	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	32633583	32633584	-	T	INS	TAF1L	ENST00000242310	human	ensembl	74_37	-1	known	frame_shift_ins	c.1995_1994	p.A666fs	1.000:1.000	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1L	HGNC	ENSG00000122728				105	0	0	116	24	17.1429
UBAP1	0	genome.wustl.edu	37	9	34241785	34241785	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	34241785	34241785	C	-	DEL	UBAP1	ENST00000545103	human	ensembl	74_37	+1	known	frame_shift_del	c.954	p.P320fs	0.104	NULL	superfamily_UBA-like,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP1	HGNC	ENSG00000165006				48	0	0	39	9	18.75
RUSC2	0	genome.wustl.edu	37	9	35547399	35547399	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	35547399	35547399	C	-	DEL	RUSC2	ENST00000361226	human	ensembl	74_37	+1	known	frame_shift_del	c.881	p.R296fs	0.055	NULL	pfam_Run,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC2	HGNC	ENSG00000198853				133	0	0	85	32	27.3504
TESK1	0	genome.wustl.edu	37	9	35607307	35607308	+	RNA	INS	-	-	TG			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	35607307	35607308	-	TG	INS	TESK1	ENST00000463897	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	TESK1	HGNC	ENSG00000107140				82	0	0	70	19	21.3483
MELK	0	genome.wustl.edu	37	9	36630152	36630152	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	36630152	36630152	T	-	DEL	MELK	ENST00000480021	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MELK	HGNC	ENSG00000165304				45	0	0	31	9	22.5
ZCCHC7	0	genome.wustl.edu	37	9	37357250	37357251	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	9	37357250	37357251	AA	-	DEL	ZCCHC7	ENST00000336755	human	ensembl	74_37	+1	known	frame_shift_del	c.1617_1618	p.K542fs	1.000:1.000	NULL	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC7	HGNC	ENSG00000147905				59	0	0	55	15	21.4286
BTK	0	genome.wustl.edu	37	X	100608059	100608061	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	100608059	100608061	AAA	-	DEL	BTK	ENST00000470069	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006:0.016:0.023	-	-	-	no_errors	BTK	HGNC	ENSG00000010671				21	0	0	31	11	26.1905
FRMPD3	0	genome.wustl.edu	37	X	106844203	106844203	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	106844203	106844203	C	-	DEL	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	frame_shift_del	c.3033	p.S1014fs	0.000	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234				29	0	0	24	6	20
AMMECR1	0	genome.wustl.edu	37	X	109561246	109561246	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	109561246	109561246	G	-	DEL	AMMECR1	ENST00000262844	human	ensembl	74_37	-1	known	frame_shift_del	c.54	p.S19fs	1.000	NULL	pfam_AMMECR1_domain,superfamily_AMMECR1_domain,pfscan_AMMECR1_domain,tigrfam_AMMECR1	-	no_errors	AMMECR1	HGNC	ENSG00000101935				25	0	0	25	10	28.5714
BCORL1	0	genome.wustl.edu	37	X	129190011	129190011	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	129190011	129190011	C	-	DEL	BCORL1	ENST00000303743	human	ensembl	74_37	+1	known	frame_shift_del	c.5258	p.P1755fs	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCORL1	HGNC	ENSG00000085185				108	0	0	71	31	30.3922
USP26	0	genome.wustl.edu	37	X	132160413	132160413	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	132160413	132160413	T	-	DEL	USP26	ENST00000370832	human	ensembl	74_37	-1	known	frame_shift_del	c.1836	p.G613fs	0.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP26	HGNC	ENSG00000134588				40	0	0	33	10	23.2558
USP26	0	genome.wustl.edu	37	X	132161205	132161205	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	132161205	132161205	A	-	DEL	USP26	ENST00000370832	human	ensembl	74_37	-1	known	frame_shift_del	c.1044	p.F348fs	0.541	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP26	HGNC	ENSG00000134588				63	0	0	61	14	18.6667
ATXN3L	0	genome.wustl.edu	37	X	13337421	13337421	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	13337421	13337421	T	-	DEL	ATXN3L	ENST00000380622	human	ensembl	74_37	-1	known	frame_shift_del	c.633	p.V212fs	0.003	prints_Josephin	pfam_Josephin,pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,prints_Josephin,pfscan_Josephin,pfscan_Ubiquitin-int_motif	-	no_errors	ATXN3L	HGNC	ENSG00000123594				231	0	0	187	48	20.4255
MOSPD1	0	genome.wustl.edu	37	X	134033048	134033048	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	134033048	134033048	T	-	DEL	MOSPD1	ENST00000462060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928				70	0	0	49	6	10.9091
SPANXN2	0	genome.wustl.edu	37	X	142803692	142803692	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	142803692	142803692	T	-	DEL	SPANXN2	ENST00000370498	human	ensembl	74_37	-1	known	frame_shift_del	c.71	p.N24fs	0.000	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXN2	HGNC	ENSG00000203924				153	1	0.649351	116	40	25.641
FANCB	0	genome.wustl.edu	37	X	14863039	14863040	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	14863039	14863040	-	A	INS	FANCB	ENST00000324138	human	ensembl	74_37	-1	known	frame_shift_ins	c.1866_1865	p.L622fs	0.323:0.328	NULL	NULL	-	no_errors	FANCB	HGNC	ENSG00000181544				200	0	0	216	53	19.7026
PLXNA3	0	genome.wustl.edu	37	X	153696202	153696202	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	153696202	153696202	G	-	DEL	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	frame_shift_del	c.3678	p.G1228fs	0.000	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827				90	0	0	75	10	11.7647
SSX1	0	genome.wustl.edu	37	X	48117223	48117223	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	48117223	48117223	A	-	DEL	SSX1	ENST00000376919	human	ensembl	74_37	+1	known	frame_shift_del	c.112	p.K39fs	0.005	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX1	HGNC	ENSG00000126752				56	0	0	41	13	24.0741
TFE3	0	genome.wustl.edu	37	X	48887951	48887952	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	48887951	48887952	-	C	INS	TFE3	ENST00000315869	human	ensembl	74_37	-1	known	frame_shift_ins	c.1446_1445	p.P483fs	0.035:0.037	pfam_bHLH_ZIP_TF_MiT/TFE	pfam_bHLH_ZIP_TF_MiT/TFE,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFE3	HGNC	ENSG00000068323				136	0	0	135	16	10.596
KDM5C	0	genome.wustl.edu	37	X	53231107	53231107	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	53231107	53231107	G	-	DEL	KDM5C	ENST00000375401	human	ensembl	74_37	-1	known	frame_shift_del	c.1795	p.R599fs	1.000	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_Znf_PHD-finger,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5C	HGNC	ENSG00000126012				93	0	0	108	20	15.625
EFNB1	0	genome.wustl.edu	37	X	68060322	68060323	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	68060322	68060323	-	G	INS	EFNB1	ENST00000204961	human	ensembl	74_37	+1	known	frame_shift_ins	c.866_867	p.S292fs	1.000:0.996	NULL	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	-	no_errors	EFNB1	HGNC	ENSG00000090776				44	0	0	43	8	15.6863
ZMYM3	0	genome.wustl.edu	37	X	70472963	70472963	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	70472963	70472963	G	-	DEL	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	frame_shift_del	c.143	p.P48fs	1.000	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130				25	0	0	22	7	24.1379
NONO	0	genome.wustl.edu	37	X	70518589	70518589	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	70518589	70518589	C	-	DEL	NONO	ENST00000276079	human	ensembl	74_37	+1	known	frame_shift_del	c.1204	p.P403fs	1.000	NULL	pfam_RRM_dom,pfam_NOPS,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NONO	HGNC	ENSG00000147140				21	0	0	23	6	20.6897
OGT	0	genome.wustl.edu	37	X	70787461	70787462	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	70787461	70787462	-	T	INS	OGT	ENST00000373719	human	ensembl	74_37	+1	known	frame_shift_ins	c.2701_2702	p.S903fs	1.000:1.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	OGT	HGNC	ENSG00000147162				53	0	0	67	14	17.284
XIST	0	genome.wustl.edu	37	X	73042890	73042890	+	RNA	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	73042890	73042890	T	-	DEL	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				40	0	0	64	14	17.9487
ATRX	0	genome.wustl.edu	37	X	76918921	76918921	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	76918921	76918921	T	-	DEL	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	frame_shift_del	c.4070	p.K1357fs	0.998	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224				58	0	0	65	14	17.7215
ZNF711	0	genome.wustl.edu	37	X	84525814	84525817	+	Frame_Shift_Del	DEL	AACT	AACT	-			TCGA-HU-A4G8-01A-11D-A25D-08	TCGA-HU-A4G8-10A-01D-A25E-08	AACT	AACT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a17300cc-85e5-4bca-b0dc-fa26a81cb5f8	c1713247-24ff-4321-9f17-7c48dde00b22	X	84525814	84525817	AACT	-	DEL	ZNF711	ENST00000395402	human	ensembl	74_37	+1	known	frame_shift_del	c.1290_1293	p.N432fs	1.000:1.000:1.000:1.000	smart_Znf_C2H2-like	pfam_Transcrp_activ_Zfx/Zfy-dom,pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF711	HGNC	ENSG00000147180				23	0	0	9	3	25
