Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
DBT	0	genome.wustl.edu	37	1	100672100	100672100	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	100672100	100672100	G	A	SNP	DBT	ENST00000370132	human	ensembl	74_37	-1	known	silent	c.1110	p.I370	0.982	pfam_2-oxoacid_DH_actylTfrase	pfam_2-oxoacid_DH_actylTfrase,pfam_Biotin_lipoyl,pfam_E3-bd,superfamily_Single_hybrid_motif,superfamily_E3-bd,pfscan_Biotin_lipoyl	-	no_errors	DBT	HGNC	ENSG00000137992				225	0	0	127	72	36.1809
VCAM1	0	genome.wustl.edu	37	1	101197054	101197054	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	101197054	101197054	C	T	SNP	VCAM1	ENST00000294728	human	ensembl	74_37	+1	known	missense	c.1505	p.T502M	0.975	pfam_Ig_C2-set	pfam_Ig_I-set,pfam_Ig_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_VCAM-1,prints_ICAM_VCAM_N	-	no_errors	VCAM1	HGNC	ENSG00000162692				71	0	0	28	17	37.7778
COL11A1	0	genome.wustl.edu	37	1	103354303	103354303	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	103354303	103354303	G	A	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	silent	c.4566	p.G1522	0.991	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				58	0	0	12	16	57.1429
AMY1C	0	genome.wustl.edu	37	1	104297194	104297194	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	104297194	104297194	C	T	SNP	AMY1C	ENST00000370079	human	ensembl	74_37	+1	known	nonsense	c.952	p.R318*	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY1C	HGNC	ENSG00000187733				127	0	0	84	32	27.5862
CASZ1	0	genome.wustl.edu	37	1	10699614	10699614	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	10699614	10699614	G	A	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	silent	c.4665	p.A1555	0.999	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940				24	0	0	7	39	84.7826
CASZ1	0	genome.wustl.edu	37	1	10725588	10725588	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	10725588	10725588	G	A	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	silent	c.57	p.P19	0.999	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940				23	0	0	3	9	75
SARS	0	genome.wustl.edu	37	1	109756660	109756660	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	109756660	109756660	C	A	SNP	SARS	ENST00000369923	human	ensembl	74_37	+1	known	missense	c.46	p.P16T	1.000	pfam_Ser-tRNA-synth_1_N,superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Ser-tRNA-synth_1_N,superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,prints_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	-	no_errors	SARS	HGNC	ENSG00000031698				30	0	0	32	21	39.6226
STRIP1	0	genome.wustl.edu	37	1	110582098	110582098	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	110582098	110582098	C	T	SNP	STRIP1	ENST00000369795	human	ensembl	74_37	+1	known	missense	c.542	p.T181M	1.000	pfam_N1221	pfam_DUF3402,pfam_N1221	-	no_errors	STRIP1	HGNC	ENSG00000143093				11	0	0	13	8	38.0952
MTOR	0	genome.wustl.edu	37	1	11167517	11167517	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	11167517	11167517	G	A	SNP	MTOR	ENST00000473471	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTOR	HGNC	ENSG00000198793				58	0	0	36	26	41.9355
ANGPTL7	0	genome.wustl.edu	37	1	11249874	11249874	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	11249874	11249874	C	T	SNP	ANGPTL7	ENST00000376819	human	ensembl	74_37	+1	known	nonsense	c.238	p.Q80*	1.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPTL7	HGNC	ENSG00000171819				36	0	0	25	2	7.40741
WDR3	0	genome.wustl.edu	37	1	118488721	118488721	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	118488721	118488721	G	C	SNP	WDR3	ENST00000349139	human	ensembl	74_37	+1	known	missense	c.1341	p.Q447H	1.000	smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_SSU_processome_Utp12,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR3	HGNC	ENSG00000065183				92	0	0	27	16	37.2093
HSD3B2	0	genome.wustl.edu	37	1	119962129	119962129	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	119962129	119962129	C	T	SNP	HSD3B2	ENST00000369416	human	ensembl	74_37	+1	known	silent	c.231	p.V77	0.000	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_Male_sterile_NAD-bd,pfam_Polysac_CapD-like,pfam_DH_sc/Rdtase_SDR,pfam_dTDP_dehydrorham_reduct,pfam_NmrA,pfam_PKS_KR	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_Male_sterile_NAD-bd,pfam_Polysac_CapD-like,pfam_DH_sc/Rdtase_SDR,pfam_dTDP_dehydrorham_reduct,pfam_NmrA,pfam_PKS_KR	-	no_errors	HSD3B2	HGNC	ENSG00000203859				45	0	0	8	33	80.4878
ZNF697	0	genome.wustl.edu	37	1	120165559	120165559	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	120165559	120165559	C	T	SNP	ZNF697	ENST00000421812	human	ensembl	74_37	-1	known	silent	c.1407	p.Q469	0.992	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF697	HGNC	ENSG00000143067				14	0	0	17	9	34.6154
HNRNPCL1	0	genome.wustl.edu	37	1	12908039	12908039	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	12908039	12908039	G	A	SNP	HNRNPCL1	ENST00000317869	human	ensembl	74_37	-1	known	missense	c.104	p.A35V	1.000	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	HNRNPCL1	HGNC	ENSG00000179172				244	0	0	186	11	5.58376
PRAMEF18	0	genome.wustl.edu	37	1	13474888	13474888	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	13474888	13474888	G	A	SNP	PRAMEF18	ENST00000376126	human	ensembl	74_37	-1	putative	missense	c.1241	p.A414V	0.859	NULL	NULL	-	no_errors	PRAMEF18	HGNC	ENSG00000204491				52	0	0	20	14	41.1765
PDPN	0	genome.wustl.edu	37	1	13910521	13910521	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	13910521	13910521	C	T	SNP	PDPN	ENST00000294489	human	ensembl	74_37	+1	known	missense	c.221	p.T74M	0.001	NULL	pfam_Podoplanin	-	no_errors	PDPN	HGNC	ENSG00000162493				45	0	0	42	30	41.6667
PDE4DIP	0	genome.wustl.edu	37	1	144857705	144857705	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	144857705	144857705	G	A	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	missense	c.6349	p.R2117W	1.000	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				162	0	0	137	23	14.375
PDE4DIP	0	genome.wustl.edu	37	1	144859846	144859846	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	144859846	144859846	C	T	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	missense	c.6238	p.A2080T	0.000	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				75	0	0	73	23	23.9583
PDE4DIP	0	genome.wustl.edu	37	1	144879338	144879338	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	144879338	144879338	A	G	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	missense	c.4112	p.V1371A	1.000	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				240	0	0	164	53	24.424
PDE4DIP	0	genome.wustl.edu	37	1	145075648	145075648	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	145075648	145075648	G	A	SNP	PDE4DIP	ENST00000369348	human	ensembl	74_37	-1	known	missense	c.215	p.A72V	0.799	NULL	pfam_Spindle_assoc	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				76	0	0	157	19	10.7955
ATAD3A	0	genome.wustl.edu	37	1	1454368	1454368	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	1454368	1454368	G	A	SNP	ATAD3A	ENST00000378755	human	ensembl	74_37	+1	known	missense	c.656	p.R219Q	1.000	pfam_DUF3523	pfam_DUF3523,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD3A	HGNC	ENSG00000197785				118	0	0	151	33	17.9348
CHD1L	0	genome.wustl.edu	37	1	146751709	146751709	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	146751709	146751709	T	C	SNP	CHD1L	ENST00000369258	human	ensembl	74_37	+1	known	missense	c.1550	p.I517T	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Macro_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	CHD1L	HGNC	ENSG00000131778				49	0	0	31	21	40.3846
ZNF687	0	genome.wustl.edu	37	1	151262928	151262928	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	151262928	151262928	G	A	SNP	ZNF687	ENST00000324048	human	ensembl	74_37	+1	known	missense	c.3098	p.R1033H	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF687	HGNC	ENSG00000143373				73	0	0	58	45	43.6893
RFX5	0	genome.wustl.edu	37	1	151318748	151318748	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	151318748	151318748	C	G	SNP	RFX5	ENST00000290524	human	ensembl	74_37	-1	known	missense	c.49	p.A17P	0.918	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX5	HGNC	ENSG00000143390				105	0	0	76	59	43.7037
CGN	0	genome.wustl.edu	37	1	151491681	151491681	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	151491681	151491681	G	A	SNP	CGN	ENST00000271636	human	ensembl	74_37	+1	known	missense	c.686	p.R229H	0.000	NULL	pfam_Myosin_tail	-	no_errors	CGN	HGNC	ENSG00000143375				123	1	0.806452	101	69	40.5882
LCE1D	0	genome.wustl.edu	37	1	152770577	152770577	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	152770577	152770577	G	A	SNP	LCE1D	ENST00000326233	human	ensembl	74_37	+1	known	missense	c.307	p.G103S	0.984	NULL	NULL	-	no_errors	LCE1D	HGNC	ENSG00000172155				76	0	0	70	31	30.6931
FLAD1	0	genome.wustl.edu	37	1	154961353	154961353	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	154961353	154961353	A	G	SNP	FLAD1	ENST00000368431	human	ensembl	74_37	+1	novel	missense	c.848	p.Y283C	0.000	NULL	pfam_Mopterin-bd_dom,superfamily_Mopterin-bd_dom,smart_Mopterin-bd_dom	-	no_errors	FLAD1	HGNC	ENSG00000160688				29	0	0	20	13	39.3939
GBA	0	genome.wustl.edu	37	1	155205593	155205593	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	155205593	155205593	C	A	SNP	GBA	ENST00000327247	human	ensembl	74_37	-1	known	missense	c.1267	p.A423S	1.000	pfam_Glyco_hydro_30,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_30,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_30	-	no_errors	GBA	HGNC	ENSG00000177628				45	0	0	26	11	29.7297
LMNA	0	genome.wustl.edu	37	1	156108328	156108328	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	156108328	156108328	C	T	SNP	LMNA	ENST00000368300	human	ensembl	74_37	+1	known	missense	c.1748	p.S583L	0.998	NULL	pfam_IF,pfam_Lamin_tail_dom,superfamily_Prefoldin	-	no_errors	LMNA	HGNC	ENSG00000160789				30	0	0	21	12	36.3636
SEMA4A	0	genome.wustl.edu	37	1	156146501	156146501	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	156146501	156146501	A	G	SNP	SEMA4A	ENST00000355014	human	ensembl	74_37	+1	known	missense	c.1999	p.R667G	0.994	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4A	HGNC	ENSG00000196189				44	0	0	34	26	43.3333
CD1D	0	genome.wustl.edu	37	1	158152725	158152725	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	158152725	158152725	T	G	SNP	CD1D	ENST00000368171	human	ensembl	74_37	+1	known	missense	c.665	p.L222R	0.999	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1D	HGNC	ENSG00000158473				92	0	0	22	115	83.9416
KCNJ9	0	genome.wustl.edu	37	1	160054211	160054211	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	160054211	160054211	C	T	SNP	KCNJ9	ENST00000368088	human	ensembl	74_37	+1	known	nonsense	c.391	p.Q131*	1.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.3	-	no_errors	KCNJ9	HGNC	ENSG00000162728				43	0	0	36	23	38.9831
HSPA6	0	genome.wustl.edu	37	1	161495291	161495291	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	161495291	161495291	G	T	SNP	HSPA6	ENST00000309758	human	ensembl	74_37	+1	known	missense	c.843	p.Q281H	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA6	HGNC	ENSG00000173110				33	0	0	26	19	42.2222
ATF6	0	genome.wustl.edu	37	1	161816299	161816299	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	161816299	161816299	G	A	SNP	ATF6	ENST00000367942	human	ensembl	74_37	+1	known	silent	c.1248	p.R416	0.999	NULL	pfam_bZIP,smart_bZIP,pfscan_bZIP	-	no_errors	ATF6	HGNC	ENSG00000118217				65	0	0	35	17	32.6923
EPHA2	0	genome.wustl.edu	37	1	16458317	16458317	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	16458317	16458317	G	A	SNP	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	missense	c.2374	p.R792W	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627				34	0	0	34	21	38.1818
LRRC52	0	genome.wustl.edu	37	1	165513572	165513572	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	165513572	165513572	C	T	SNP	LRRC52	ENST00000294818	human	ensembl	74_37	+1	known	silent	c.39	p.L13	1.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC52	HGNC	ENSG00000162763				87	0	0	33	37	52.8571
DUSP27	0	genome.wustl.edu	37	1	167096928	167096928	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	167096928	167096928	T	C	SNP	DUSP27	ENST00000271385	human	ensembl	74_37	+1	known	missense	c.2560	p.Y854H	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842				39	0	0	24	15	38.4615
NADK	0	genome.wustl.edu	37	1	1688041	1688041	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	1688041	1688041	T	C	SNP	NADK	ENST00000344463	human	ensembl	74_37	-1	known	missense	c.835	p.M279V	1.000	superfamily_ATP-NAD_kinase_PpnK-typ	pfam_PolyP/ATP_NADK_prd,superfamily_ATP-NAD_kinase_PpnK-typ	-	no_errors	NADK	HGNC	ENSG00000008130				56	0	0	25	13	34.2105
CEP350	0	genome.wustl.edu	37	1	180063357	180063357	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	180063357	180063357	A	G	SNP	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	missense	c.8117	p.N2706S	0.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837				25	0	0	5	3	37.5
KLHDC7A	0	genome.wustl.edu	37	1	18809240	18809240	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	18809240	18809240	G	A	SNP	KLHDC7A	ENST00000400664	human	ensembl	74_37	+1	known	missense	c.1765	p.G589R	1.000	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,smart_Kelch_1	-	no_errors	KLHDC7A	HGNC	ENSG00000179023				21	0	0	23	15	39.4737
CFH	0	genome.wustl.edu	37	1	196695710	196695710	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	196695710	196695710	A	G	SNP	CFH	ENST00000367429	human	ensembl	74_37	+1	known	missense	c.1984	p.R662G	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971				71	0	0	29	5	14.7059
ASPM	0	genome.wustl.edu	37	1	197099066	197099066	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	197099066	197099066	C	T	SNP	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	missense	c.2608	p.V870I	1.000	superfamily_CH-domain	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279				59	0	0	55	3	5.17241
IGFN1	0	genome.wustl.edu	37	1	201184907	201184907	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	201184907	201184907	G	A	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	missense	c.9236	p.S3079N	1.000	pfam_Ig_I-set,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395				15	0	0	15	10	40
PKP1	0	genome.wustl.edu	37	1	201253030	201253030	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	201253030	201253030	G	A	SNP	PKP1	ENST00000263946	human	ensembl	74_37	+1	known	missense	c.200	p.R67Q	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP1	HGNC	ENSG00000081277				32	0	0	17	19	52.7778
TMEM183A	0	genome.wustl.edu	37	1	202992135	202992135	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	202992135	202992135	G	A	SNP	TMEM183A	ENST00000367242	human	ensembl	74_37	+1	known	nonsense	c.1098	p.W366*	1.000	NULL	superfamily_F-box_dom	-	no_errors	TMEM183A	HGNC	ENSG00000163444				53	0	0	42	34	44.7368
ATP2B4	0	genome.wustl.edu	37	1	203677055	203677055	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	203677055	203677055	C	T	SNP	ATP2B4	ENST00000357681	human	ensembl	74_37	+1	known	silent	c.1380	p.T460	0.002	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B4	HGNC	ENSG00000058668				117	0	0	47	36	43.3735
PIK3C2B	0	genome.wustl.edu	37	1	204399062	204399062	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	204399062	204399062	G	A	SNP	PIK3C2B	ENST00000367187	human	ensembl	74_37	-1	known	missense	c.4385	p.P1462L	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,smart_C2_dom,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2B	HGNC	ENSG00000133056				59	0	0	73	46	38.6555
MFSD4	0	genome.wustl.edu	37	1	205561221	205561221	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	205561221	205561221	G	A	SNP	MFSD4	ENST00000465651	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MFSD4	HGNC	ENSG00000174514				31	0	0	14	10	41.6667
CR1L	0	genome.wustl.edu	37	1	207818619	207818619	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	207818619	207818619	G	A	SNP	CR1L	ENST00000508064	human	ensembl	74_37	+1	known	missense	c.41	p.R14Q	0.002	NULL	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1L	HGNC	ENSG00000197721				68	0	0	61	48	44.0367
PLXNA2	0	genome.wustl.edu	37	1	208390360	208390360	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	208390360	208390360	G	C	SNP	PLXNA2	ENST00000367033	human	ensembl	74_37	-1	known	missense	c.908	p.A303G	0.326	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA2	HGNC	ENSG00000076356				52	0	0	65	22	25.2874
DTL	0	genome.wustl.edu	37	1	212273987	212273987	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	212273987	212273987	A	G	SNP	DTL	ENST00000366991	human	ensembl	74_37	+1	known	missense	c.1655	p.K552R	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DTL	HGNC	ENSG00000143476				73	0	0	36	21	36.8421
ATF3	0	genome.wustl.edu	37	1	212788387	212788387	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	212788387	212788387	G	T	SNP	ATF3	ENST00000341491	human	ensembl	74_37	+1	known	missense	c.24	p.Q8H	1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	ATF3	HGNC	ENSG00000162772				70	0	0	52	44	45.8333
USH2A	0	genome.wustl.edu	37	1	216497693	216497693	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	216497693	216497693	A	C	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.1145	p.V382G	1.000	smart_Laminin_N,pfscan_Laminin_N	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				13	0	0	9	11	55
HSPG2	0	genome.wustl.edu	37	1	22174580	22174580	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	22174580	22174580	C	T	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.7744	p.G2582S	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				11	0	0	6	9	60
NUP133	0	genome.wustl.edu	37	1	229643960	229643960	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	229643960	229643960	T	A	SNP	NUP133	ENST00000261396	human	ensembl	74_37	-1	known	missense	c.37	p.T13S	0.007	NULL	pfam_Nucleoporin_Nup133/Nup155_C,pfam_Nucleoporin_Nup133/Nup155_N	-	no_errors	NUP133	HGNC	ENSG00000069248				10	0	0	9	7	43.75
EPHB2	0	genome.wustl.edu	37	1	23111249	23111249	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	23111249	23111249	G	A	SNP	EPHB2	ENST00000400191	human	ensembl	74_37	+1	known	missense	c.491	p.R164Q	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHB2	HGNC	ENSG00000133216				28	0	0	32	18	36
PCNXL2	0	genome.wustl.edu	37	1	233134088	233134088	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	233134088	233134088	C	T	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	silent	c.5700	p.P1900	0.000	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				36	0	0	42	30	41.6667
PLD5	0	genome.wustl.edu	37	1	242428713	242428713	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	242428713	242428713	G	A	SNP	PLD5	ENST00000536534	human	ensembl	74_37	-1	known	missense	c.533	p.S178L	0.944	NULL	smart_PLipase_D/transphosphatidylase	-	no_errors	PLD5	HGNC	ENSG00000180287				47	0	0	44	4	8.33333
KIF26B	0	genome.wustl.edu	37	1	245849742	245849742	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	245849742	245849742	G	A	SNP	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	missense	c.3457	p.D1153N	0.007	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849				84	0	0	64	31	32.6316
NLRP3	0	genome.wustl.edu	37	1	247588307	247588307	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	247588307	247588307	T	A	SNP	NLRP3	ENST00000336119	human	ensembl	74_37	+1	known	missense	c.1562	p.I521N	1.000	pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711				43	0	0	24	20	45.4545
OR2M5	0	genome.wustl.edu	37	1	248309098	248309098	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	248309098	248309098	T	C	SNP	OR2M5	ENST00000366476	human	ensembl	74_37	+1	known	missense	c.649	p.S217P	0.025	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M5	HGNC	ENSG00000162727				273	0	0	163	103	38.7218
OR2M4	0	genome.wustl.edu	37	1	248402974	248402974	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	248402974	248402974	C	T	SNP	OR2M4	ENST00000306687	human	ensembl	74_37	+1	known	silent	c.744	p.V248	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M4	HGNC	ENSG00000171180				69	0	0	41	30	42.2535
ARID1A	0	genome.wustl.edu	37	1	27100207	27100207	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	27100207	27100207	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	nonsense	c.4003	p.R1335*	0.945	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				138	0	0	102	61	37.4233
SYTL1	0	genome.wustl.edu	37	1	27677388	27677388	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	27677388	27677388	C	T	SNP	SYTL1	ENST00000543823	human	ensembl	74_37	+1	known	missense	c.1109	p.P370L	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL1	HGNC	ENSG00000142765				46	0	0	37	35	48.6111
MAP3K6	0	genome.wustl.edu	37	1	27691373	27691373	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	27691373	27691373	A	G	SNP	MAP3K6	ENST00000357582	human	ensembl	74_37	-1	known	missense	c.371	p.L124P	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K6	HGNC	ENSG00000142733				38	0	0	43	22	33.8462
PTPRU	0	genome.wustl.edu	37	1	29641884	29641884	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	29641884	29641884	C	T	SNP	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	silent	c.3258	p.S1086	0.990	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656				60	0	0	50	29	36.7089
COL16A1	0	genome.wustl.edu	37	1	32127954	32127954	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	32127954	32127954	T	C	SNP	COL16A1	ENST00000271069	human	ensembl	74_37	-1	known	missense	c.3662	p.D1221G	1.000	NULL	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL16A1	HGNC	ENSG00000084636				13	0	0	18	4	18.1818
TMEM39B	0	genome.wustl.edu	37	1	32557559	32557559	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	32557559	32557559	A	G	SNP	TMEM39B	ENST00000336294	human	ensembl	74_37	+1	known	missense	c.874	p.S292G	1.000	pfam_Uncharacterised_TMEM39	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39B	HGNC	ENSG00000121775				33	0	0	32	13	28.8889
LCK	0	genome.wustl.edu	37	1	32740365	32740365	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	32740365	32740365	C	T	SNP	LCK	ENST00000333070	human	ensembl	74_37	+1	known	missense	c.133	p.R45W	0.998	superfamily_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	LCK	HGNC	ENSG00000182866				44	0	0	37	16	30.1887
RBBP4	0	genome.wustl.edu	37	1	33134370	33134370	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	33134370	33134370	G	A	SNP	RBBP4	ENST00000373493	human	ensembl	74_37	+1	known	missense	c.515	p.R172H	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,pfam_Histone-bd_RBBP4_N,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RBBP4	HGNC	ENSG00000162521				56	0	0	45	4	8.16327
ZSCAN20	0	genome.wustl.edu	37	1	33959045	33959045	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	33959045	33959045	T	C	SNP	ZSCAN20	ENST00000361328	human	ensembl	74_37	+1	known	missense	c.1703	p.L568P	0.998	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_SANT/Myb,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN20	HGNC	ENSG00000121903				109	0	0	113	70	38.2514
TRIT1	0	genome.wustl.edu	37	1	40309782	40309782	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	40309782	40309782	C	T	SNP	TRIT1	ENST00000316891	human	ensembl	74_37	-1	known	missense	c.1225	p.E409K	0.997	pfam_Znf_C2H2_jaz,smart_Znf_U1	pfam_IPPT,pfam_Isopentenyl_transferase,pfam_Znf_C2H2_jaz,superfamily_P-loop_NTPase,smart_Znf_U1,tigrfam_tRNA_delta_PyrP_Trfase	-	no_errors	TRIT1	HGNC	ENSG00000043514				67	0	0	29	18	38.2979
TIE1	0	genome.wustl.edu	37	1	43785110	43785110	+	RNA	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	43785110	43785110	T	C	SNP	TIE1	ENST00000492599	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	TIE1	HGNC	ENSG00000066056				101	0	0	68	68	50
KDM4A	0	genome.wustl.edu	37	1	44131409	44131409	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	44131409	44131409	C	T	SNP	KDM4A	ENST00000372396	human	ensembl	74_37	+1	known	silent	c.666	p.L222	0.033	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4A	HGNC	ENSG00000066135				57	0	0	32	25	43.8596
RNF220	0	genome.wustl.edu	37	1	44877843	44877843	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	44877843	44877843	T	G	SNP	RNF220	ENST00000355387	human	ensembl	74_37	+1	known	missense	c.74	p.L25R	1.000	NULL	superfamily_Peptidase_M20_dimer,pfscan_Znf_RING	-	no_errors	RNF220	HGNC	ENSG00000187147				115	0	0	70	71	50.3546
CYP4B1	0	genome.wustl.edu	37	1	47280920	47280920	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	47280920	47280920	C	T	SNP	CYP4B1	ENST00000371923	human	ensembl	74_37	+1	known	nonsense	c.1057	p.Q353*	0.017	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4B1	HGNC	ENSG00000142973				38	0	0	22	5	18.5185
CYP4X1	0	genome.wustl.edu	37	1	47512174	47512174	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	47512174	47512174	G	A	SNP	CYP4X1	ENST00000371901	human	ensembl	74_37	+1	known	missense	c.1109	p.C370Y	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4X1	HGNC	ENSG00000186377				41	0	0	25	12	32.4324
SELRC1	0	genome.wustl.edu	37	1	53153414	53153414	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	53153414	53153414	A	G	SNP	SELRC1	ENST00000371538	human	ensembl	74_37	-1	known	missense	c.674	p.V225A	0.166	NULL	pfam_Sel1-like,smart_Sel1-like	-	no_errors	SELRC1	HGNC	ENSG00000162377				49	0	0	24	13	35.1351
CHD5	0	genome.wustl.edu	37	1	6181285	6181285	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	6181285	6181285	C	T	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	missense	c.4792	p.A1598T	0.650	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254				33	0	0	22	21	48.8372
CHD5	0	genome.wustl.edu	37	1	6206467	6206467	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	6206467	6206467	G	A	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	missense	c.1607	p.T536M	1.000	superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254				56	0	0	19	19	50
IL12RB2	0	genome.wustl.edu	37	1	67833651	67833651	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	67833651	67833651	C	T	SNP	IL12RB2	ENST00000262345	human	ensembl	74_37	+1	known	nonsense	c.1402	p.Q468*	0.001	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_IgC2-like_lig-bd,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL12RB2	HGNC	ENSG00000081985				87	0	0	63	38	37.6238
DEPDC1	0	genome.wustl.edu	37	1	68948473	68948473	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	68948473	68948473	T	C	SNP	DEPDC1	ENST00000456315	human	ensembl	74_37	-1	known	missense	c.1018	p.K340E	1.000	superfamily_Rho_GTPase_activation_prot	pfam_DEP_dom,superfamily_Rho_GTPase_activation_prot,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC1	HGNC	ENSG00000024526				78	0	0	34	30	46.875
MSH4	0	genome.wustl.edu	37	1	76344799	76344799	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	76344799	76344799	T	C	SNP	MSH4	ENST00000263187	human	ensembl	74_37	+1	known	missense	c.1663	p.S555P	1.000	pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_core	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH4	HGNC	ENSG00000057468				34	0	0	15	13	46.4286
PRKACB	0	genome.wustl.edu	37	1	84649798	84649798	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	84649798	84649798	C	T	SNP	PRKACB	ENST00000370685	human	ensembl	74_37	+1	known	nonsense	c.457	p.R153*	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACB	HGNC	ENSG00000142875				59	0	0	23	16	41.0256
MCOLN3	0	genome.wustl.edu	37	1	85494960	85494960	+	RNA	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	85494960	85494960	G	T	SNP	MCOLN3	ENST00000475312	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MCOLN3	HGNC	ENSG00000055732				10	0	0	6	6	50
SLC2A5	0	genome.wustl.edu	37	1	9098963	9098963	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	9098963	9098963	C	T	SNP	SLC2A5	ENST00000377424	human	ensembl	74_37	-1	known	missense	c.1022	p.R341Q	0.949	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,prints_Fru_transpt_5,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A5	HGNC	ENSG00000142583				13	0	0	13	6	31.5789
CCDC18	0	genome.wustl.edu	37	1	93667456	93667456	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	93667456	93667456	C	T	SNP	CCDC18	ENST00000557479	human	ensembl	74_37	+1	known	nonsense	c.1060	p.R354*	1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483				38	0	0	12	4	25
PTBP2	0	genome.wustl.edu	37	1	97272007	97272007	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	97272007	97272007	C	T	SNP	PTBP2	ENST00000394184	human	ensembl	74_37	+1	known	silent	c.1125	p.F375	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	PTBP2	HGNC	ENSG00000117569				101	0	0	63	42	40
HPSE2	0	genome.wustl.edu	37	10	100481427	100481427	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	100481427	100481427	C	T	SNP	HPSE2	ENST00000370552	human	ensembl	74_37	-1	known	missense	c.943	p.A315T	0.998	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE2	HGNC	ENSG00000172987				44	0	0	49	18	26.8657
LBX1	0	genome.wustl.edu	37	10	102987446	102987446	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	102987446	102987446	G	A	SNP	LBX1	ENST00000370193	human	ensembl	74_37	-1	known	missense	c.427	p.R143C	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	LBX1	HGNC	ENSG00000138136				119	0	0	137	45	24.7253
PSD	0	genome.wustl.edu	37	10	104174786	104174786	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	104174786	104174786	T	C	SNP	PSD	ENST00000020673	human	ensembl	74_37	-1	known	missense	c.958	p.S320G	1.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD	HGNC	ENSG00000059915				47	0	0	51	19	27.1429
NT5C2	0	genome.wustl.edu	37	10	104934693	104934693	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	104934693	104934693	C	T	SNP	NT5C2	ENST00000343289	human	ensembl	74_37	-1	known	missense	c.23	p.R8Q	1.000	pirsf_Pur_nucleotidase	pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom,pirsf_Pur_nucleotidase,tigrfam_HAD-SF_hydro_IG_5-nucl	-	no_errors	NT5C2	HGNC	ENSG00000076685				132	0	0	112	33	22.7586
IDI1	0	genome.wustl.edu	37	10	1088622	1088622	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	1088622	1088622	G	A	SNP	IDI1	ENST00000381344	human	ensembl	74_37	-1	known	nonsense	c.487	p.R163*	0.346	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	-	no_errors	IDI1	HGNC	ENSG00000067064				66	0	0	48	19	28.3582
WDR37	0	genome.wustl.edu	37	10	1118155	1118155	+	Silent	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	1118155	1118155	C	A	SNP	WDR37	ENST00000263150	human	ensembl	74_37	+1	known	silent	c.60	p.S20	0.669	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR37	HGNC	ENSG00000047056				86	0	0	89	27	23.2759
PDCD4	0	genome.wustl.edu	37	10	112644996	112644996	+	RNA	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	112644996	112644996	C	A	SNP	PDCD4	ENST00000481353	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PDCD4	HGNC	ENSG00000150593				58	0	0	55	23	29.4872
VWA2	0	genome.wustl.edu	37	10	116020979	116020979	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	116020979	116020979	C	A	SNP	VWA2	ENST00000392982	human	ensembl	74_37	+1	known	missense	c.296	p.P99H	0.854	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_EG-like_dom,pfam_EGF_extracell,smart_VWF_A,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_VWF_A	-	no_errors	VWA2	HGNC	ENSG00000165816				86	0	0	69	23	25
AFAP1L2	0	genome.wustl.edu	37	10	116057157	116057157	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	116057157	116057157	G	A	SNP	AFAP1L2	ENST00000545353	human	ensembl	74_37	-1	known	missense	c.2288	p.A763V	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1L2	HGNC	ENSG00000169129				24	0	0	24	18	42.8571
FAM53B	0	genome.wustl.edu	37	10	126311936	126311936	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	126311936	126311936	C	T	SNP	FAM53B	ENST00000337318	human	ensembl	74_37	-1	known	missense	c.1144	p.A382T	0.000	NULL	NULL	-	no_errors	FAM53B	HGNC	ENSG00000189319				34	0	0	44	27	38.0282
CTBP2	0	genome.wustl.edu	37	10	126691652	126691652	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	126691652	126691652	C	T	SNP	CTBP2	ENST00000309035	human	ensembl	74_37	-1	known	missense	c.1855	p.A619T	1.000	pfam_D-isomer_2_OHA_DH_cat_dom	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	CTBP2	HGNC	ENSG00000175029				55	0	0	60	20	25
DHX32	0	genome.wustl.edu	37	10	127530326	127530326	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	127530326	127530326	G	A	SNP	DHX32	ENST00000284690	human	ensembl	74_37	-1	known	missense	c.1529	p.A510V	1.000	pfam_Helicase-assoc_dom,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_Helicase-assoc_dom,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd	-	no_errors	DHX32	HGNC	ENSG00000089876				47	0	0	32	13	28.8889
ADAM12	0	genome.wustl.edu	37	10	127824144	127824144	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	127824144	127824144	G	A	SNP	ADAM12	ENST00000494661	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADAM12	HGNC	ENSG00000148848				32	0	0	29	10	25.641
EBF3	0	genome.wustl.edu	37	10	131640510	131640510	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	131640510	131640510	G	A	SNP	EBF3	ENST00000355311	human	ensembl	74_37	-1	known	silent	c.1242	p.S414	0.468	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF3	HGNC	ENSG00000108001				112	0	0	180	67	27.1255
ADAM8	0	genome.wustl.edu	37	10	135083463	135083463	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	135083463	135083463	G	A	SNP	ADAM8	ENST00000445355	human	ensembl	74_37	-1	known	missense	c.1801	p.R601C	0.000	smart_ADAM_Cys-rich	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,pfam_ADAM_Cys-rich,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM8	HGNC	ENSG00000151651				62	0	0	79	39	33.0508
FAM171A1	0	genome.wustl.edu	37	10	15290656	15290656	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	15290656	15290656	G	A	SNP	FAM171A1	ENST00000378116	human	ensembl	74_37	-1	known	missense	c.736	p.R246W	1.000	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171A1	HGNC	ENSG00000148468				65	0	0	88	39	30.7087
SPAG6	0	genome.wustl.edu	37	10	22634743	22634743	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	22634743	22634743	C	T	SNP	SPAG6	ENST00000376603	human	ensembl	74_37	+1	known	silent	c.117	p.N39	1.000	NULL	pfam_Armadillo,pfam_HEAT,pfam_26S_Psome_nonATP_su5,superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	SPAG6	HGNC	ENSG00000077327				13	0	0	23	9	28.125
MSRB2	0	genome.wustl.edu	37	10	23408166	23408166	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	23408166	23408166	G	A	SNP	MSRB2	ENST00000468633	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MSRB2	HGNC	ENSG00000148450				39	0	0	30	10	25
SVIL	0	genome.wustl.edu	37	10	29775128	29775128	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	29775128	29775128	A	G	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	silent	c.4665	p.Y1555	0.999	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				84	0	0	59	26	30.5882
FZD8	0	genome.wustl.edu	37	10	35928502	35928502	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	35928502	35928502	C	T	SNP	FZD8	ENST00000374694	human	ensembl	74_37	-1	known	missense	c.1856	p.R619H	1.000	pfam_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD8	HGNC	ENSG00000177283				20	0	0	40	14	25.9259
HSD17B7P2	0	genome.wustl.edu	37	10	38654432	38654432	+	RNA	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	38654432	38654432	A	G	SNP	HSD17B7P2	ENST00000494540	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSD17B7P2	HGNC	ENSG00000099251				41	0	0	63	6	8.69565
RASGEF1A	0	genome.wustl.edu	37	10	43693537	43693537	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	43693537	43693537	G	T	SNP	RASGEF1A	ENST00000395809	human	ensembl	74_37	-1	known	missense	c.1139	p.P380H	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGEF1A	HGNC	ENSG00000198915				105	1	0.943396	87	28	24.3478
ZNF239	0	genome.wustl.edu	37	10	44052231	44052231	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	44052231	44052231	A	G	SNP	ZNF239	ENST00000306006	human	ensembl	74_37	-1	known	missense	c.1297	p.C433R	0.992	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF239	HGNC	ENSG00000196793				48	0	0	40	21	34.4262
GDF10	0	genome.wustl.edu	37	10	48438579	48438579	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	48438579	48438579	G	A	SNP	GDF10	ENST00000224605	human	ensembl	74_37	-1	known	silent	c.132	p.P44	0.000	pirsf_BMP3/GDF10	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,pirsf_BMP3/GDF10	-	no_errors	GDF10	HGNC	ENSG00000107623				10	0	0	10	5	33.3333
FRMPD2	0	genome.wustl.edu	37	10	49459733	49459733	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	49459733	49459733	G	A	SNP	FRMPD2	ENST00000374201	human	ensembl	74_37	-1	known	silent	c.27	p.G9	0.983	NULL	pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_PDZ,superfamily_FERM_central,superfamily_Kinase-like_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,pfscan_FERM_domain,pfscan_PDZ,prints_Band_41_fam	-	no_errors	FRMPD2	HGNC	ENSG00000170324				54	0	0	53	26	32.9114
SLC18A3	0	genome.wustl.edu	37	10	50819345	50819345	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	50819345	50819345	C	A	SNP	SLC18A3	ENST00000374115	human	ensembl	74_37	+1	known	missense	c.559	p.L187M	1.000	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A3	HGNC	ENSG00000187714				40	0	0	59	17	22.3684
OGDHL	0	genome.wustl.edu	37	10	50946253	50946253	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	50946253	50946253	T	G	SNP	OGDHL	ENST00000374103	human	ensembl	74_37	-1	known	missense	c.2375	p.D792A	1.000	pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_DH_E1,pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	OGDHL	HGNC	ENSG00000197444				57	0	0	80	28	25.9259
FAM13C	0	genome.wustl.edu	37	10	61062600	61062600	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	61062600	61062600	C	T	SNP	FAM13C	ENST00000373868	human	ensembl	74_37	-1	known	silent	c.468	p.S156	0.997	NULL	NULL	-	no_errors	FAM13C	HGNC	ENSG00000148541				79	0	0	59	17	22.3684
ANK3	0	genome.wustl.edu	37	10	61833851	61833851	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	61833851	61833851	G	A	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.6788	p.A2263V	0.061	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				122	0	0	110	29	20.8633
EGR2	0	genome.wustl.edu	37	10	64573489	64573489	+	Silent	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	64573489	64573489	T	G	SNP	EGR2	ENST00000242480	human	ensembl	74_37	-1	known	silent	c.909	p.A303	0.004	NULL	pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR2	HGNC	ENSG00000122877				27	0	0	54	26	32.5
JMJD1C	0	genome.wustl.edu	37	10	64967739	64967739	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	64967739	64967739	T	C	SNP	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	silent	c.3690	p.P1230	0.995	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988				102	0	0	64	22	25.5814
H2AFY2	0	genome.wustl.edu	37	10	71871427	71871427	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	71871427	71871427	C	T	SNP	H2AFY2	ENST00000373255	human	ensembl	74_37	+1	known	silent	c.1107	p.L369	0.600	pirsf_Core_histone_macro-H2A,pfscan_Macro_dom	pfam_Macro_dom,pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,smart_Macro_dom,pirsf_Core_histone_macro-H2A,pfscan_Macro_dom,prints_Histone_H2A	-	no_errors	H2AFY2	HGNC	ENSG00000099284				29	0	0	38	16	29.6296
PRF1	0	genome.wustl.edu	37	10	72358855	72358855	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	72358855	72358855	T	C	SNP	PRF1	ENST00000373209	human	ensembl	74_37	-1	known	missense	c.622	p.T208A	1.000	pfam_MACPF,smart_MACPF	pfam_MACPF,pfam_C2_dom,superfamily_C2_dom,smart_MACPF,smart_C2_dom,pfscan_C2_dom	-	no_errors	PRF1	HGNC	ENSG00000180644				42	0	0	55	15	21.4286
KAT6B	0	genome.wustl.edu	37	10	76790451	76790451	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	76790451	76790451	C	T	SNP	KAT6B	ENST00000287239	human	ensembl	74_37	+1	known	missense	c.5869	p.R1957W	0.988	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,pfam_Histone_H1/H5_H15,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6B	HGNC	ENSG00000156650				122	0	0	150	50	25
DUPD1	0	genome.wustl.edu	37	10	76797703	76797703	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	76797703	76797703	G	A	SNP	DUPD1	ENST00000338487	human	ensembl	74_37	-1	known	missense	c.554	p.P185L	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP_famA,prints_Atypical_DUSP	-	no_errors	DUPD1	HGNC	ENSG00000188716				57	0	0	84	20	19.2308
ZNF503	0	genome.wustl.edu	37	10	77158990	77158990	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	77158990	77158990	C	T	SNP	ZNF503	ENST00000372524	human	ensembl	74_37	-1	known	silent	c.1458	p.A486	0.518	NULL	pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2	-	no_errors	ZNF503	HGNC	ENSG00000165655				19	0	0	25	12	32.4324
ADIRF	0	genome.wustl.edu	37	10	88728342	88728342	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	88728342	88728342	A	T	SNP	ADIRF	ENST00000372013	human	ensembl	74_37	+1	known	missense	c.41	p.E14V	0.816	NULL	NULL	-	no_errors	ADIRF	HGNC	ENSG00000148671				26	0	0	32	11	25.5814
HTR7	0	genome.wustl.edu	37	10	92509261	92509261	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	92509261	92509261	G	A	SNP	HTR7	ENST00000336152	human	ensembl	74_37	-1	known	silent	c.630	p.S210	0.006	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT_7_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	HTR7	HGNC	ENSG00000148680				90	0	0	70	28	28.5714
TNKS2	0	genome.wustl.edu	37	10	93600433	93600433	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	93600433	93600433	A	G	SNP	TNKS2	ENST00000371627	human	ensembl	74_37	+1	known	missense	c.1643	p.H548R	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS2	HGNC	ENSG00000107854				108	0	0	95	44	31.6547
TNKS2	0	genome.wustl.edu	37	10	93617285	93617285	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	93617285	93617285	A	G	SNP	TNKS2	ENST00000371627	human	ensembl	74_37	+1	known	missense	c.3092	p.H1031R	1.000	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS2	HGNC	ENSG00000107854				44	0	0	26	14	35
PLCE1	0	genome.wustl.edu	37	10	95931103	95931103	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	95931103	95931103	C	T	SNP	PLCE1	ENST00000260766	human	ensembl	74_37	+1	known	silent	c.1659	p.V553	0.392	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_dom,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,smart_Ras-assoc,pfscan_C2_dom,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C	-	no_errors	PLCE1	HGNC	ENSG00000138193				124	0	0	106	64	37.6471
BLNK	0	genome.wustl.edu	37	10	97964352	97964352	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	97964352	97964352	G	A	SNP	BLNK	ENST00000224337	human	ensembl	74_37	-1	known	missense	c.838	p.R280C	1.000	NULL	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	BLNK	HGNC	ENSG00000095585				64	0	0	52	23	30.6667
MMP12	0	genome.wustl.edu	37	11	102743659	102743659	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	102743659	102743659	C	T	SNP	MMP12	ENST00000326227	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MMP12	HGNC	ENSG00000110347				31	0	0	14	12	46.1538
DDI1	0	genome.wustl.edu	37	11	103908603	103908603	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	103908603	103908603	C	T	SNP	DDI1	ENST00000302259	human	ensembl	74_37	+1	known	silent	c.1053	p.I351	0.755	pfam_RVP_2	pfam_Peptidase_aspartic_DDI1-type,pfam_Ubiquitin_dom,pfam_RVP_2,pfam_Pept_A2A_retrovirus_sg,superfamily_Peptidase_aspartic_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	DDI1	HGNC	ENSG00000170967				67	0	0	32	18	36
TTC12	0	genome.wustl.edu	37	11	113220807	113220807	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	113220807	113220807	G	A	SNP	TTC12	ENST00000314756	human	ensembl	74_37	+1	known	silent	c.1167	p.A389	0.985	superfamily_ARM-type_fold	pfam_TPR_1,superfamily_ARM-type_fold,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC12	HGNC	ENSG00000149292				88	0	0	33	22	40
DRD2	0	genome.wustl.edu	37	11	113287588	113287588	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	113287588	113287588	C	T	SNP	DRD2	ENST00000355319	human	ensembl	74_37	-1	known	missense	c.529	p.A177T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopamine_D2_rcpt,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt	-	no_errors	DRD2	HGNC	ENSG00000149295				20	0	0	19	12	38.7097
DKK3	0	genome.wustl.edu	37	11	12029972	12029972	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	12029972	12029972	T	C	SNP	DKK3	ENST00000326932	human	ensembl	74_37	-1	known	missense	c.158	p.E53G	1.000	NULL	pfam_Dickkopf_N	-	no_errors	DKK3	HGNC	ENSG00000050165				19	0	0	23	14	37.8378
TECTA	0	genome.wustl.edu	37	11	120998812	120998812	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	120998812	120998812	G	A	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	missense	c.2126	p.R709Q	0.991	smart_VWC_out,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927				66	0	0	57	35	38.0435
SORL1	0	genome.wustl.edu	37	11	121475876	121475876	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	121475876	121475876	G	A	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.4706	p.G1569E	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642				102	0	0	72	37	33.945
FOXRED1	0	genome.wustl.edu	37	11	126147471	126147471	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	126147471	126147471	C	T	SNP	FOXRED1	ENST00000263578	human	ensembl	74_37	+1	known	nonsense	c.1348	p.R450*	0.996	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase	-	no_errors	FOXRED1	HGNC	ENSG00000110074				55	0	0	35	18	33.9623
APLP2	0	genome.wustl.edu	37	11	129992283	129992283	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	129992283	129992283	A	G	SNP	APLP2	ENST00000263574	human	ensembl	74_37	+1	known	missense	c.797	p.E266G	1.000	NULL	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APLP2	HGNC	ENSG00000084234				76	0	0	37	35	48.6111
B3GAT1	0	genome.wustl.edu	37	11	134253988	134253988	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	134253988	134253988	G	A	SNP	B3GAT1	ENST00000537389	human	ensembl	74_37	-1	known	silent	c.246	p.T82	0.414	NULL	pfam_Glyco_trans_43	-	no_errors	B3GAT1	HGNC	ENSG00000109956				27	0	0	12	11	47.8261
MYOD1	0	genome.wustl.edu	37	11	17741442	17741442	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	17741442	17741442	C	T	SNP	MYOD1	ENST00000250003	human	ensembl	74_37	+1	known	missense	c.113	p.P38L	1.000	pfam_Basic,smart_Basic	pfam_Basic,pfam_Myf5,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYOD1	HGNC	ENSG00000129152				64	0	0	46	45	49.4505
CD81	0	genome.wustl.edu	37	11	2418088	2418088	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	2418088	2418088	G	A	SNP	CD81	ENST00000263645	human	ensembl	74_37	+1	known	missense	c.703	p.V235M	1.000	NULL	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	CD81	HGNC	ENSG00000110651				36	0	0	31	13	29.5455
DCDC1	0	genome.wustl.edu	37	11	30914483	30914483	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	30914483	30914483	C	T	SNP	DCDC1	ENST00000406071	human	ensembl	74_37	-1	known	missense	c.1169	p.R390H	0.000	NULL	NULL	-	no_errors	DCDC1	HGNC	ENSG00000170959				75	0	0	40	25	38.4615
DCDC1	0	genome.wustl.edu	37	11	30926528	30926528	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	30926528	30926528	C	T	SNP	DCDC1	ENST00000339794	human	ensembl	74_37	-1	known	missense	c.1525	p.V509M	1.000	NULL	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959				65	0	0	36	24	40
C11orf94	0	genome.wustl.edu	37	11	45928442	45928442	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	45928442	45928442	C	T	SNP	C11orf94	ENST00000449465	human	ensembl	74_37	-1	known	silent	c.153	p.Q51	0.674	NULL	NULL	-	no_errors	C11orf94	HGNC	ENSG00000234776				82	0	0	69	51	42.5
PTPRJ	0	genome.wustl.edu	37	11	48177606	48177606	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	48177606	48177606	C	T	SNP	PTPRJ	ENST00000418331	human	ensembl	74_37	+1	known	missense	c.3373	p.R1125C	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRJ	HGNC	ENSG00000149177				137	0	0	53	31	36.9048
OR4B1	0	genome.wustl.edu	37	11	48239219	48239219	+	Silent	SNP	A	A	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	48239219	48239219	A	T	SNP	OR4B1	ENST00000309562	human	ensembl	74_37	+1	known	silent	c.858	p.T286	0.853	prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4B1	HGNC	ENSG00000175619				60	0	0	33	20	37.7358
OR5L2	0	genome.wustl.edu	37	11	55595253	55595253	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	55595253	55595253	C	T	SNP	OR5L2	ENST00000378397	human	ensembl	74_37	+1	known	missense	c.559	p.L187F	0.659	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5L2	HGNC	ENSG00000205030				194	0	0	121	78	39.196
OR9G1	0	genome.wustl.edu	37	11	56468148	56468148	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	56468148	56468148	C	T	SNP	OR9G1	ENST00000312153	human	ensembl	74_37	+1	known	silent	c.285	p.G95	0.946	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9G1	HGNC	ENSG00000174914				133	0	0	93	21	18.4211
OR1S2	0	genome.wustl.edu	37	11	57971241	57971241	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	57971241	57971241	G	A	SNP	OR1S2	ENST00000302592	human	ensembl	74_37	-1	known	missense	c.413	p.A138V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1S2	HGNC	ENSG00000197887				123	0	0	60	58	49.1525
OR5B21	0	genome.wustl.edu	37	11	58275210	58275210	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	58275210	58275210	C	T	SNP	OR5B21	ENST00000360374	human	ensembl	74_37	-1	known	silent	c.369	p.A123	0.009	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5B21	HGNC	ENSG00000198283				43	0	0	29	14	32.5581
OR56A4	0	genome.wustl.edu	37	11	6023815	6023815	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	6023815	6023815	C	T	SNP	OR56A4	ENST00000330728	human	ensembl	74_37	-1	known	silent	c.564	p.P188	0.011	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR56A4	HGNC	ENSG00000183389				41	0	0	22	13	37.1429
CCDC86	0	genome.wustl.edu	37	11	60617781	60617781	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	60617781	60617781	C	T	SNP	CCDC86	ENST00000227520	human	ensembl	74_37	+1	known	missense	c.1066	p.P356S	0.076	NULL	NULL	-	no_errors	CCDC86	HGNC	ENSG00000110104				62	0	0	41	28	40.5797
OR56B4	0	genome.wustl.edu	37	11	6129814	6129814	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	6129814	6129814	C	T	SNP	OR56B4	ENST00000316529	human	ensembl	74_37	+1	known	missense	c.806	p.A269V	0.004	pfam_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR56B4	HGNC	ENSG00000180919				87	0	0	42	17	28.8136
DAGLA	0	genome.wustl.edu	37	11	61511877	61511877	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	61511877	61511877	G	A	SNP	DAGLA	ENST00000257215	human	ensembl	74_37	+1	known	silent	c.3045	p.A1015	0.000	NULL	pfam_Lipase_3	-	no_errors	DAGLA	HGNC	ENSG00000134780				67	0	0	51	33	39.2857
AHNAK	0	genome.wustl.edu	37	11	62289568	62289568	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	62289568	62289568	A	G	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	silent	c.12321	p.G4107	0.182	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942				142	1	0.699301	73	54	42.5197
FERMT3	0	genome.wustl.edu	37	11	63987213	63987213	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	63987213	63987213	A	T	SNP	FERMT3	ENST00000279227	human	ensembl	74_37	+1	known	missense	c.1031	p.D344V	1.000	pfam_FERM_central,smart_Band_41_domain	pfam_FERM_central,pfam_Pleckstrin_homology,superfamily_FERM_central,smart_Band_41_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	FERMT3	HGNC	ENSG00000149781				90	0	0	77	43	35.8333
CDC42BPG	0	genome.wustl.edu	37	11	64594015	64594015	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	64594015	64594015	G	T	SNP	CDC42BPG	ENST00000342711	human	ensembl	74_37	-1	known	missense	c.4526	p.P1509H	0.999	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219				8	0	0	5	5	50
ATG2A	0	genome.wustl.edu	37	11	64675299	64675299	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	64675299	64675299	G	A	SNP	ATG2A	ENST00000421419	human	ensembl	74_37	-1	known	missense	c.2428	p.R810C	0.988	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2A	HGNC	ENSG00000110046				20	0	0	19	8	29.6296
DNHD1	0	genome.wustl.edu	37	11	6592451	6592451	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	6592451	6592451	C	T	SNP	DNHD1	ENST00000254579	human	ensembl	74_37	+1	known	missense	c.13709	p.A4570V	0.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,superfamily_P-loop_NTPase,superfamily_t-SNARE	-	no_errors	DNHD1	HGNC	ENSG00000179532				18	0	0	14	8	36.3636
DNHD1	0	genome.wustl.edu	37	11	6592454	6592454	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	6592454	6592454	A	G	SNP	DNHD1	ENST00000254579	human	ensembl	74_37	+1	known	missense	c.13712	p.D4571G	0.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,superfamily_P-loop_NTPase,superfamily_t-SNARE	-	no_errors	DNHD1	HGNC	ENSG00000179532				18	0	0	14	7	33.3333
NPAS4	0	genome.wustl.edu	37	11	66191381	66191381	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	66191381	66191381	G	A	SNP	NPAS4	ENST00000311034	human	ensembl	74_37	+1	known	silent	c.1020	p.P340	0.001	NULL	pfam_PAS_fold_3,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	NPAS4	HGNC	ENSG00000174576				184	0	0	91	77	45.8333
DCHS1	0	genome.wustl.edu	37	11	6662364	6662364	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	6662364	6662364	G	A	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	missense	c.481	p.R161C	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341				36	0	0	28	18	39.1304
LRFN4	0	genome.wustl.edu	37	11	66625209	66625209	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	66625209	66625209	G	A	SNP	LRFN4	ENST00000531590	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.974	-	-	-	no_errors	LRFN4	HGNC	ENSG00000173621				29	0	0	16	13	44.8276
TBC1D10C	0	genome.wustl.edu	37	11	67171768	67171768	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	67171768	67171768	G	A	SNP	TBC1D10C	ENST00000312390	human	ensembl	74_37	+1	known	missense	c.95	p.G32D	0.021	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D10C	HGNC	ENSG00000175463				33	0	0	25	13	34.2105
GPR152	0	genome.wustl.edu	37	11	67218801	67218801	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	67218801	67218801	C	T	SNP	GPR152	ENST00000312457	human	ensembl	74_37	-1	known	silent	c.1395	p.P465	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR152	HGNC	ENSG00000175514				68	0	0	62	32	34.0426
PITPNM1	0	genome.wustl.edu	37	11	67259711	67259711	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	67259711	67259711	C	T	SNP	PITPNM1	ENST00000356404	human	ensembl	74_37	-1	known	silent	c.3528	p.S1176	0.980	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697				28	0	0	26	17	39.5349
PPP6R3	0	genome.wustl.edu	37	11	68326104	68326104	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	68326104	68326104	G	A	SNP	PPP6R3	ENST00000393799	human	ensembl	74_37	+1	known	missense	c.802	p.A268T	1.000	pfam_SAPS,superfamily_ARM-type_fold	pfam_SAPS,superfamily_ARM-type_fold	-	no_errors	PPP6R3	HGNC	ENSG00000110075				76	0	0	32	21	39.6226
SHANK2	0	genome.wustl.edu	37	11	70332856	70332856	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	70332856	70332856	C	A	SNP	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	missense	c.3545	p.G1182V	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105				49	0	0	41	33	44.5946
PDE2A	0	genome.wustl.edu	37	11	72295734	72295734	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	72295734	72295734	C	T	SNP	PDE2A	ENST00000334456	human	ensembl	74_37	-1	known	silent	c.1398	p.A466	0.570	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE2A	HGNC	ENSG00000186642				34	0	0	34	19	35.8491
C2CD3	0	genome.wustl.edu	37	11	73811600	73811600	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	73811600	73811600	A	C	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	missense	c.2702	p.L901R	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014				77	0	0	68	4	5.55556
XRRA1	0	genome.wustl.edu	37	11	74563070	74563070	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	74563070	74563070	C	T	SNP	XRRA1	ENST00000340360	human	ensembl	74_37	-1	known	missense	c.1204	p.V402I	0.007	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	XRRA1	HGNC	ENSG00000166435				59	0	0	37	29	43.9394
SCYL2	0	genome.wustl.edu	37	12	100732521	100732521	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	100732521	100732521	C	T	SNP	SCYL2	ENST00000360820	human	ensembl	74_37	+1	known	silent	c.2361	p.P787	0.605	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	SCYL2	HGNC	ENSG00000136021				124	0	0	105	13	11.0169
NR1H4	0	genome.wustl.edu	37	12	100957258	100957258	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	100957258	100957258	C	T	SNP	NR1H4	ENST00000551379	human	ensembl	74_37	+1	known	silent	c.1452	p.D484	0.577	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt	-	no_errors	NR1H4	HGNC	ENSG00000012504				101	0	0	42	33	44
ANO4	0	genome.wustl.edu	37	12	101488050	101488050	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	101488050	101488050	C	T	SNP	ANO4	ENST00000392977	human	ensembl	74_37	+1	known	missense	c.1718	p.A573V	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO4	HGNC	ENSG00000151572				41	0	0	22	11	33.3333
MYBPC1	0	genome.wustl.edu	37	12	102046519	102046519	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	102046519	102046519	T	C	SNP	MYBPC1	ENST00000361466	human	ensembl	74_37	+1	known	silent	c.1590	p.P530	0.779	smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC1	HGNC	ENSG00000196091				96	0	0	57	41	41.8367
ASCL1	0	genome.wustl.edu	37	12	103352248	103352248	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	103352248	103352248	G	A	SNP	ASCL1	ENST00000266744	human	ensembl	74_37	+1	known	missense	c.226	p.G76R	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ASCL1	HGNC	ENSG00000139352				10	0	0	8	4	33.3333
ENSG00000180574	0	genome.wustl.edu	37	12	10658572	10658572	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	10658572	10658572	A	G	SNP	ENSG00000180574	ENST00000538173	human	ensembl	74_37	+1	known	missense	c.71	p.D24G	1.000	NULL	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3L	Uniprot_gn	ENSG00000180574				68	0	0	39	46	54.1176
UBE3B	0	genome.wustl.edu	37	12	109935661	109935661	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	109935661	109935661	G	A	SNP	UBE3B	ENST00000342494	human	ensembl	74_37	+1	known	missense	c.752	p.R251Q	0.997	NULL	pfam_HECT,pfam_IQ_motif_EF-hand-BS,superfamily_HECT,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3B	HGNC	ENSG00000151148				80	0	0	32	28	46.6667
TAS2R14	0	genome.wustl.edu	37	12	11091143	11091143	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	11091143	11091143	C	T	SNP	TAS2R14	ENST00000537503	human	ensembl	74_37	-1	known	missense	c.664	p.A222T	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R14	HGNC	ENSG00000212127				54	0	0	27	12	30.7692
HECTD4	0	genome.wustl.edu	37	12	112681729	112681729	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	112681729	112681729	T	G	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.4082	p.D1361A	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064				96	0	0	52	46	46.9388
OAS3	0	genome.wustl.edu	37	12	113405292	113405292	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	113405292	113405292	C	T	SNP	OAS3	ENST00000228928	human	ensembl	74_37	+1	known	missense	c.2759	p.A920V	0.006	pfam_2-5-oligoAdlate_synth_1_dom2/C	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	OAS3	HGNC	ENSG00000111331				16	0	0	11	11	50
LHX5	0	genome.wustl.edu	37	12	113905192	113905192	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	113905192	113905192	C	T	SNP	LHX5	ENST00000261731	human	ensembl	74_37	-1	known	missense	c.710	p.R237Q	0.964	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX5	HGNC	ENSG00000089116				9	0	0	6	5	45.4545
RBM19	0	genome.wustl.edu	37	12	114377796	114377796	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	114377796	114377796	C	T	SNP	RBM19	ENST00000261741	human	ensembl	74_37	-1	known	missense	c.1907	p.R636H	1.000	smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom	-	no_errors	RBM19	HGNC	ENSG00000122965				79	0	0	63	46	42.2018
RBM19	0	genome.wustl.edu	37	12	114383685	114383685	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	114383685	114383685	G	A	SNP	RBM19	ENST00000261741	human	ensembl	74_37	-1	known	missense	c.1574	p.A525V	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom	-	no_errors	RBM19	HGNC	ENSG00000122965				33	0	0	19	9	32.1429
NOS1	0	genome.wustl.edu	37	12	117728108	117728108	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	117728108	117728108	T	C	SNP	NOS1	ENST00000317775	human	ensembl	74_37	-1	known	missense	c.976	p.T326A	1.000	superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_euk,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250				41	0	0	11	11	50
ETV6	0	genome.wustl.edu	37	12	11905513	11905513	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	11905513	11905513	C	T	SNP	ETV6	ENST00000396373	human	ensembl	74_37	+1	known	missense	c.163	p.R55C	1.000	pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV6	HGNC	ENSG00000139083				52	0	0	52	25	32.4675
GCN1L1	0	genome.wustl.edu	37	12	120575043	120575043	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	120575043	120575043	G	A	SNP	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	silent	c.6744	p.G2248	0.999	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154				76	0	0	75	41	35.3448
EP400	0	genome.wustl.edu	37	12	132504737	132504737	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	132504737	132504737	C	T	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	missense	c.4529	p.T1510M	0.999	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				69	0	0	56	35	38.4615
DDX51	0	genome.wustl.edu	37	12	132624721	132624721	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	132624721	132624721	G	A	SNP	DDX51	ENST00000397333	human	ensembl	74_37	-1	known	missense	c.1697	p.A566V	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX51	HGNC	ENSG00000185163				65	0	0	45	28	38.3562
P2RX2	0	genome.wustl.edu	37	12	133197075	133197075	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	133197075	133197075	C	T	SNP	P2RX2	ENST00000343948	human	ensembl	74_37	+1	known	missense	c.680	p.T227M	0.067	pfam_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X2_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX2	HGNC	ENSG00000187848				50	0	0	59	32	35.1648
KDM5A	0	genome.wustl.edu	37	12	427454	427454	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	427454	427454	G	A	SNP	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	silent	c.2715	p.D905	1.000	pfam_Lys_sp_deMease_like_dom	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614				133	0	0	72	43	37.3913
ANO6	0	genome.wustl.edu	37	12	45740868	45740868	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	45740868	45740868	T	C	SNP	ANO6	ENST00000425752	human	ensembl	74_37	+1	known	missense	c.343	p.S115P	1.000	NULL	pfam_Anoctamin	-	no_errors	ANO6	HGNC	ENSG00000177119				56	0	0	26	20	43.4783
FKBP11	0	genome.wustl.edu	37	12	49317602	49317602	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	49317602	49317602	C	A	SNP	FKBP11	ENST00000550765	human	ensembl	74_37	-1	known	missense	c.351	p.L117F	1.000	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP11	HGNC	ENSG00000134285				83	0	0	37	27	42.1875
ESPL1	0	genome.wustl.edu	37	12	53685483	53685483	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	53685483	53685483	A	G	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	missense	c.5530	p.S1844G	0.983	pfam_Peptidase_C50	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476				190	1	0.52356	153	113	42.4812
PCBP2	0	genome.wustl.edu	37	12	53861054	53861054	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	53861054	53861054	C	T	SNP	PCBP2	ENST00000603815	human	ensembl	74_37	+1	known	missense	c.776	p.T259M	1.000	NULL	pfam_KH_dom_type_1,pfam_KH_dom_type_2,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	PCBP2	HGNC	ENSG00000197111				89	0	0	35	27	43.5484
ERBB3	0	genome.wustl.edu	37	12	56478854	56478854	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	56478854	56478854	G	A	SNP	ERBB3	ENST00000267101	human	ensembl	74_37	+1	known	missense	c.310	p.V104M	0.994	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Furin-like_Cys-rich_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB3	HGNC	ENSG00000065361				110	0	0	104	19	15.4472
ESYT1	0	genome.wustl.edu	37	12	56526318	56526318	+	Silent	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	56526318	56526318	C	A	SNP	ESYT1	ENST00000267113	human	ensembl	74_37	+1	known	silent	c.1098	p.T366	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_C2_dom,pfscan_C2_dom	-	no_errors	ESYT1	HGNC	ENSG00000139641				73	0	0	31	16	34.0426
MARS	0	genome.wustl.edu	37	12	57909883	57909883	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	57909883	57909883	G	A	SNP	MARS	ENST00000315473	human	ensembl	74_37	+1	known	missense	c.1870	p.A624T	0.008	NULL	pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_tRNAsynth_1a_anticodon-bd,prints_Met-tRNA_synth,tigrfam_Met-tRNA_synth	-	no_errors	MARS	HGNC	ENSG00000166986				21	0	0	14	8	36.3636
XPOT	0	genome.wustl.edu	37	12	64812808	64812808	+	Silent	SNP	C	C	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	64812808	64812808	C	G	SNP	XPOT	ENST00000332707	human	ensembl	74_37	+1	known	silent	c.423	p.L141	0.776	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPOT	HGNC	ENSG00000184575				101	0	0	63	5	7.35294
RPSAP52	0	genome.wustl.edu	37	12	66152139	66152139	+	RNA	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	66152139	66152139	C	A	SNP	RPSAP52	ENST00000489520	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPSAP52	HGNC	ENSG00000241749				16	0	0	6	9	60
NCAPD2	0	genome.wustl.edu	37	12	6639960	6639960	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	6639960	6639960	C	A	SNP	NCAPD2	ENST00000315579	human	ensembl	74_37	+1	known	missense	c.3941	p.P1314Q	0.052	pirsf_Condensin_cplx_su1	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_Condensin_cplx_su1	-	no_errors	NCAPD2	HGNC	ENSG00000010292				91	0	0	58	43	42.5743
BEST3	0	genome.wustl.edu	37	12	70070963	70070963	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	70070963	70070963	G	A	SNP	BEST3	ENST00000330891	human	ensembl	74_37	-1	known	silent	c.711	p.T237	0.052	pfam_Bestrophin/UPF0187	pfam_Bestrophin/UPF0187	-	no_errors	BEST3	HGNC	ENSG00000127325				16	0	0	12	9	42.8571
CAPS2	0	genome.wustl.edu	37	12	75692669	75692669	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	75692669	75692669	C	T	SNP	CAPS2	ENST00000409445	human	ensembl	74_37	-1	known	missense	c.989	p.R330Q	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CAPS2	HGNC	ENSG00000180881				37	0	0	12	5	29.4118
SLC2A3	0	genome.wustl.edu	37	12	8077069	8077069	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	8077069	8077069	A	G	SNP	SLC2A3	ENST00000075120	human	ensembl	74_37	-1	known	silent	c.1005	p.H335	0.020	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A3	HGNC	ENSG00000059804				60	0	0	27	12	30.7692
C3AR1	0	genome.wustl.edu	37	12	8212583	8212583	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	8212583	8212583	C	T	SNP	C3AR1	ENST00000307637	human	ensembl	74_37	-1	known	missense	c.199	p.A67T	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Anaphtx_C3AR1,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt,prints_Formyl_pep_rcpt,prints_Anaphtx_C5AR1/C5AR2	-	no_errors	C3AR1	HGNC	ENSG00000171860				50	0	0	27	21	43.75
SLC9A7P1	0	genome.wustl.edu	37	12	98849119	98849119	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	98849119	98849119	C	T	SNP	SLC9A7P1	ENST00000554295	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.765	-	-	-	no_errors	SLC9A7P1	HGNC	ENSG00000227825				23	0	0	8	3	27.2727
ANKS1B	0	genome.wustl.edu	37	12	99837450	99837450	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	99837450	99837450	C	A	SNP	ANKS1B	ENST00000329257	human	ensembl	74_37	-1	known	splice_site	c.1575+1	e11+1	1.000	-	-	-	no_errors	ANKS1B	HGNC	ENSG00000185046				39	0	0	16	23	58.9744
ERCC5	0	genome.wustl.edu	37	13	103514608	103514608	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	103514608	103514608	G	A	SNP	ERCC5	ENST00000355739	human	ensembl	74_37	+1	known	missense	c.1109	p.R370H	0.000	tigrfam_XPG/Rad2_eukaryotes	pfam_XPG_DNA_repair_N,pfam_XPG-I_dom,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2_eukaryotes,prints_XPG/Rad2,tigrfam_XPG/Rad2_eukaryotes	-	no_errors	ERCC5	HGNC	ENSG00000134899				65	0	0	34	25	42.3729
MYO16	0	genome.wustl.edu	37	13	109779875	109779875	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	109779875	109779875	C	T	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	missense	c.3962	p.A1321V	0.619	NULL	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515				20	0	0	22	10	31.25
ING1	0	genome.wustl.edu	37	13	111371946	111371946	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	111371946	111371946	C	T	SNP	ING1	ENST00000375774	human	ensembl	74_37	+1	known	silent	c.936	p.D312	0.220	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	ING1	HGNC	ENSG00000153487				37	0	0	25	13	34.2105
TFDP1	0	genome.wustl.edu	37	13	114292126	114292126	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	114292126	114292126	T	G	SNP	TFDP1	ENST00000544902	human	ensembl	74_37	+1	known	missense	c.913	p.F305V	0.155	pirsf_Transcrpt_fac_DP	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	-	no_errors	TFDP1	HGNC	ENSG00000198176				85	0	0	38	38	50
GRK1	0	genome.wustl.edu	37	13	114324053	114324053	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	114324053	114324053	G	A	SNP	GRK1	ENST00000335678	human	ensembl	74_37	+1	known	missense	c.751	p.V251M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK1	HGNC	ENSG00000185974				170	0	0	93	60	39.2157
TMEM255B	0	genome.wustl.edu	37	13	114507955	114507955	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	114507955	114507955	C	T	SNP	TMEM255B	ENST00000375353	human	ensembl	74_37	+1	known	missense	c.767	p.T256M	0.002	NULL	NULL	-	no_errors	TMEM255B	HGNC	ENSG00000184497				34	0	0	40	25	38.4615
GJB6	0	genome.wustl.edu	37	13	20797605	20797605	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	20797605	20797605	C	T	SNP	GJB6	ENST00000241124	human	ensembl	74_37	-1	known	silent	c.15	p.T5	0.000	pfam_Connexin_N	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJB6	HGNC	ENSG00000121742				99	0	0	75	46	38.0165
CRYL1	0	genome.wustl.edu	37	13	21006292	21006292	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	21006292	21006292	A	G	SNP	CRYL1	ENST00000298248	human	ensembl	74_37	-1	known	silent	c.582	p.V194	0.009	pfam_3HC_DH_C,superfamily_6-PGluconate_DH_C-like	pfam_3-OHacyl-CoA_DH_NAD-bd,pfam_3HC_DH_C,superfamily_6-PGluconate_DH_C-like	-	no_errors	CRYL1	HGNC	ENSG00000165475				69	0	0	47	20	29.8507
XPO4	0	genome.wustl.edu	37	13	21396279	21396279	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	21396279	21396279	A	G	SNP	XPO4	ENST00000255305	human	ensembl	74_37	-1	known	silent	c.990	p.T330	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	XPO4	HGNC	ENSG00000132953				49	0	0	34	20	37.037
SACS	0	genome.wustl.edu	37	13	23905616	23905616	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	23905616	23905616	A	G	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	silent	c.12399	p.G4133	0.973	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				93	0	0	51	30	37.037
CCDC169-SOHLH2	0	genome.wustl.edu	37	13	36776016	36776016	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	36776016	36776016	C	T	SNP	CCDC169-SOHLH2	ENST00000511166	human	ensembl	74_37	-1	known	missense	c.494	p.R165K	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	CCDC169-SOHLH2	HGNC	ENSG00000250709				53	0	0	16	19	54.2857
RCBTB2	0	genome.wustl.edu	37	13	49076918	49076918	+	Nonstop_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	49076918	49076918	A	G	SNP	RCBTB2	ENST00000544904	human	ensembl	74_37	-1	known	nonstop	c.844	p.*282R	0.004	NULL	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RCBTB2	HGNC	ENSG00000136161				61	0	0	67	38	36.1905
TBC1D4	0	genome.wustl.edu	37	13	75936261	75936261	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	75936261	75936261	G	A	SNP	TBC1D4	ENST00000377636	human	ensembl	74_37	-1	known	silent	c.981	p.H327	0.126	smart_PTB/PI_dom	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D4	HGNC	ENSG00000136111				57	0	0	59	44	42.7184
MYCBP2	0	genome.wustl.edu	37	13	77755927	77755927	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	77755927	77755927	C	T	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	missense	c.4850	p.R1617Q	0.994	superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810				79	0	0	52	22	29.7297
SLITRK5	0	genome.wustl.edu	37	13	88329003	88329003	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	88329003	88329003	G	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.1360	p.G454R	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				50	0	0	33	13	28.2609
UGGT2	0	genome.wustl.edu	37	13	96513099	96513099	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	96513099	96513099	T	C	SNP	UGGT2	ENST00000376747	human	ensembl	74_37	-1	known	missense	c.3683	p.K1228R	0.483	NULL	pfam_UDP-g_GGtrans,pfam_Glyco_trans_8	-	no_errors	UGGT2	HGNC	ENSG00000102595				33	0	0	15	9	37.5
RNF113B	0	genome.wustl.edu	37	13	98829237	98829237	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	98829237	98829237	G	A	SNP	RNF113B	ENST00000267291	human	ensembl	74_37	-1	known	missense	c.254	p.A85V	0.061	NULL	pfam_Znf_CCCH,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF113B	HGNC	ENSG00000139797				44	0	0	23	19	45.2381
SNORD114-22	0	genome.wustl.edu	37	14	101449281	101449281	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	101449281	101449281	C	T	SNP	SNORD114-22	ENST00000365423	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNORD114-22	HGNC	ENSG00000202293				98	0	0	35	46	56.7901
TNFAIP2	0	genome.wustl.edu	37	14	103598068	103598068	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	103598068	103598068	C	T	SNP	TNFAIP2	ENST00000333007	human	ensembl	74_37	+1	known	missense	c.1391	p.T464I	0.893	pfam_Sec6	pfam_Sec6	-	no_errors	TNFAIP2	HGNC	ENSG00000185215				21	0	0	30	13	30.2326
AHNAK2	0	genome.wustl.edu	37	14	105411993	105411993	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	105411993	105411993	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	silent	c.9795	p.P3265	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				194	0	0	150	118	44.0299
POTEM	0	genome.wustl.edu	37	14	20002286	20002286	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	20002286	20002286	A	G	SNP	POTEM	ENST00000547848	human	ensembl	74_37	-1	known	missense	c.1136	p.L379S	0.021	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEM	HGNC	ENSG00000187537				29	0	0	9	4	30.7692
ARHGEF40	0	genome.wustl.edu	37	14	21543173	21543173	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	21543173	21543173	C	T	SNP	ARHGEF40	ENST00000298694	human	ensembl	74_37	+1	known	silent	c.1284	p.C428	0.002	NULL	pfam_DH-domain,superfamily_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF40	HGNC	ENSG00000165801				58	0	0	51	39	43.3333
PABPN1	0	genome.wustl.edu	37	14	23793419	23793419	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	23793419	23793419	G	A	SNP	PABPN1	ENST00000216727	human	ensembl	74_37	+1	known	missense	c.802	p.A268T	0.998	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PABPN1	HGNC	ENSG00000100836				75	0	0	62	42	40.3846
CPNE6	0	genome.wustl.edu	37	14	24546187	24546187	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	24546187	24546187	C	T	SNP	CPNE6	ENST00000537691	human	ensembl	74_37	+1	known	missense	c.1430	p.P477L	0.003	pfam_Copine,smart_VWF_A,pfscan_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE6	HGNC	ENSG00000100884				32	0	0	19	12	38.7097
EMC9	0	genome.wustl.edu	37	14	24610340	24610340	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	24610340	24610340	G	A	SNP	EMC9	ENST00000216799	human	ensembl	74_37	-1	known	silent	c.174	p.V58	1.000	pfam_UPF0172	pfam_UPF0172	-	no_errors	EMC9	HGNC	ENSG00000100908				66	0	0	82	40	32.7869
SDR39U1	0	genome.wustl.edu	37	14	24909989	24909989	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	24909989	24909989	C	A	SNP	SDR39U1	ENST00000399395	human	ensembl	74_37	-1	known	missense	c.472	p.G158W	0.981	pfam_Epimerase_deHydtase,tigrfam_Sugar_nucleotide_Epase_put	pfam_DUF1731_C,pfam_Epimerase_deHydtase,tigrfam_Sugar_nucleotide_Epase_put	-	no_errors	SDR39U1	HGNC	ENSG00000100445				44	0	0	47	22	31.8841
CTSG	0	genome.wustl.edu	37	14	25042923	25042923	+	Silent	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	25042923	25042923	T	G	SNP	CTSG	ENST00000216336	human	ensembl	74_37	-1	known	silent	c.688	p.R230	0.630	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CTSG	HGNC	ENSG00000100448				169	0	0	115	84	42.2111
HECTD1	0	genome.wustl.edu	37	14	31592235	31592235	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	31592235	31592235	C	T	SNP	HECTD1	ENST00000399332	human	ensembl	74_37	-1	known	missense	c.5000	p.R1667H	1.000	NULL	pfam_HECT,pfam_Sad1_UNC_C,pfam_Mib_Herc2,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,superfamily_Galactose-bd-like,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT	-	no_errors	HECTD1	HGNC	ENSG00000092148				72	0	0	41	30	42.2535
NKX2-8	0	genome.wustl.edu	37	14	37051560	37051560	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	37051560	37051560	C	T	SNP	NKX2-8	ENST00000258829	human	ensembl	74_37	-1	known	missense	c.35	p.R12H	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-8	HGNC	ENSG00000136327				15	0	0	18	10	35.7143
FSCB	0	genome.wustl.edu	37	14	44974339	44974339	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	44974339	44974339	C	G	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.1852	p.A618P	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139				30	0	0	19	20	51.2821
RPL13AP3	0	genome.wustl.edu	37	14	56233000	56233000	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	56233000	56233000	G	A	SNP	RPL13AP3	ENST00000494676	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL13AP3	HGNC	ENSG00000177350				10	0	0	13	12	48
GPR135	0	genome.wustl.edu	37	14	59930838	59930838	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	59930838	59930838	G	A	SNP	GPR135	ENST00000395116	human	ensembl	74_37	-1	known	silent	c.1107	p.S369	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR135	HGNC	ENSG00000181619				21	0	0	28	17	37.7778
GPR135	0	genome.wustl.edu	37	14	59930957	59930957	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	59930957	59930957	C	T	SNP	GPR135	ENST00000395116	human	ensembl	74_37	-1	known	missense	c.988	p.A330T	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR135	HGNC	ENSG00000181619				32	0	0	27	22	44.898
RTN1	0	genome.wustl.edu	37	14	60074118	60074118	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	60074118	60074118	C	T	SNP	RTN1	ENST00000267484	human	ensembl	74_37	-1	known	missense	c.1858	p.V620M	1.000	pfam_Reticulon,pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN1	HGNC	ENSG00000139970				29	0	0	23	11	32.3529
SNAPC1	0	genome.wustl.edu	37	14	62234021	62234021	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	62234021	62234021	G	A	SNP	SNAPC1	ENST00000216294	human	ensembl	74_37	+1	known	missense	c.380	p.R127K	1.000	pfam_SNAPc_SNAP43	pfam_SNAPc_SNAP43	-	no_errors	SNAPC1	HGNC	ENSG00000023608				54	0	0	26	22	45.8333
SYNE2	0	genome.wustl.edu	37	14	64518335	64518335	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	64518335	64518335	A	G	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	silent	c.7704	p.E2568	0.999	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				40	0	0	16	11	40.7407
GPHN	0	genome.wustl.edu	37	14	66975270	66975270	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	66975270	66975270	A	G	SNP	GPHN	ENST00000478722	human	ensembl	74_37	+1	known	missense	c.25	p.T9A	1.000	NULL	pfam_Mopterin-bd_dom,pfam_MoeA_linker/N,pfam_MoeA_C_domain_IV,superfamily_MoeA_linker/N,superfamily_Mopterin-bd_dom,superfamily_MoeA_C_domain_IV,smart_Mopterin-bd_dom,tigrfam_Mo_cofactor_synthesis	-	no_errors	GPHN	HGNC	ENSG00000171723				88	0	0	59	41	41
VRTN	0	genome.wustl.edu	37	14	74823869	74823869	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	74823869	74823869	T	C	SNP	VRTN	ENST00000256362	human	ensembl	74_37	+1	known	missense	c.383	p.V128A	1.000	NULL	pfam_Transposase_8	-	no_errors	VRTN	HGNC	ENSG00000133980				38	0	0	34	28	45.1613
RPS6KL1	0	genome.wustl.edu	37	14	75376342	75376342	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	75376342	75376342	A	G	SNP	RPS6KL1	ENST00000358328	human	ensembl	74_37	-1	known	missense	c.1174	p.W392R	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_MIT,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_MIT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	RPS6KL1	HGNC	ENSG00000198208				48	0	0	58	27	31.7647
NRXN3	0	genome.wustl.edu	37	14	80319911	80319911	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	80319911	80319911	C	T	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.4099	p.R1367C	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				90	0	0	65	37	36.2745
EML5	0	genome.wustl.edu	37	14	89123848	89123848	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	89123848	89123848	T	C	SNP	EML5	ENST00000554922	human	ensembl	74_37	-1	known	splice_site	c.3878-2	e27-2	1.000	-	-	-	no_errors	EML5	HGNC	ENSG00000165521				20	0	0	8	6	42.8571
FBLN5	0	genome.wustl.edu	37	14	92353624	92353624	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	92353624	92353624	C	T	SNP	FBLN5	ENST00000342058	human	ensembl	74_37	-1	known	missense	c.652	p.V218M	0.435	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,superfamily_TIL_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	FBLN5	HGNC	ENSG00000140092				128	0	0	69	42	37.8378
LINS	0	genome.wustl.edu	37	15	101110170	101110170	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	101110170	101110170	G	T	SNP	LINS	ENST00000314742	human	ensembl	74_37	-1	known	nonsense	c.1547	p.S516*	1.000	NULL	NULL	-	no_errors	LINS	HGNC	ENSG00000140471				34	0	0	16	8	33.3333
SNORD116-20	0	genome.wustl.edu	37	15	25332953	25332953	+	RNA	SNP	A	A	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	25332953	25332953	A	C	SNP	SNORD116-20	ENST00000567527	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNORD116-20	HGNC	ENSG00000261069				101	0	0	39	33	45.8333
SNHG14	0	genome.wustl.edu	37	15	25492322	25492322	+	RNA	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	25492322	25492322	G	T	SNP	SNHG14	ENST00000453082	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				27	0	0	18	13	41.9355
ATP10A	0	genome.wustl.edu	37	15	26107859	26107859	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	26107859	26107859	C	T	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.385	p.E129K	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190				22	0	0	22	10	31.25
HERC2	0	genome.wustl.edu	37	15	28493822	28493822	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	28493822	28493822	A	G	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	silent	c.3111	p.C1037	0.993	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				41	0	0	19	14	42.4242
IVD	0	genome.wustl.edu	37	15	40707606	40707606	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	40707606	40707606	G	A	SNP	IVD	ENST00000487418	human	ensembl	74_37	+1	known	missense	c.894	p.M298I	1.000	pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCo_DH/oxidase_C	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	IVD	HGNC	ENSG00000128928				26	0	0	29	2	6.45161
ZNF106	0	genome.wustl.edu	37	15	42717190	42717190	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	42717190	42717190	C	A	SNP	ZNF106	ENST00000263805	human	ensembl	74_37	-1	known	missense	c.4963	p.G1655C	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_Znf_C2H2-like,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ZNF106	HGNC	ENSG00000103994				39	0	0	38	17	30.9091
CDAN1	0	genome.wustl.edu	37	15	43022830	43022830	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	43022830	43022830	G	A	SNP	CDAN1	ENST00000356231	human	ensembl	74_37	-1	known	missense	c.2140	p.R714W	1.000	NULL	NULL	-	no_errors	CDAN1	HGNC	ENSG00000140326				24	0	0	24	7	22.5806
PDIA3	0	genome.wustl.edu	37	15	44063406	44063406	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	44063406	44063406	A	G	SNP	PDIA3	ENST00000300289	human	ensembl	74_37	+1	known	missense	c.1508	p.E503G	0.985	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	PDIA3	HGNC	ENSG00000167004				36	0	0	11	4	26.6667
DUOX1	0	genome.wustl.edu	37	15	45431269	45431269	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	45431269	45431269	A	G	SNP	DUOX1	ENST00000321429	human	ensembl	74_37	+1	known	silent	c.1119	p.P373	0.944	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX1	HGNC	ENSG00000137857				35	0	0	15	14	48.2759
SEMA6D	0	genome.wustl.edu	37	15	48056471	48056471	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	48056471	48056471	G	A	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	missense	c.1066	p.A356T	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872				75	0	0	30	28	48.2759
FBN1	0	genome.wustl.edu	37	15	48762843	48762843	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	48762843	48762843	C	T	SNP	FBN1	ENST00000316623	human	ensembl	74_37	-1	known	missense	c.4447	p.G1483R	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN	pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN1	HGNC	ENSG00000166147				42	0	0	44	35	44.3038
EID1	0	genome.wustl.edu	37	15	49170700	49170700	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	49170700	49170700	C	T	SNP	EID1	ENST00000530028	human	ensembl	74_37	+1	known	silent	c.327	p.Y109	0.991	NULL	NULL	-	no_errors	EID1	HGNC	ENSG00000255302				23	0	0	20	13	39.3939
AP4E1	0	genome.wustl.edu	37	15	51260544	51260544	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	51260544	51260544	C	T	SNP	AP4E1	ENST00000261842	human	ensembl	74_37	+1	known	missense	c.1936	p.R646C	1.000	superfamily_ARM-type_fold,pirsf_AP4_complex_esu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Coatomer_bsu_C,superfamily_ARM-type_fold,pirsf_AP4_complex_esu	-	no_errors	AP4E1	HGNC	ENSG00000081014				18	0	0	10	6	37.5
DMXL2	0	genome.wustl.edu	37	15	51792058	51792058	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	51792058	51792058	T	C	SNP	DMXL2	ENST00000543779	human	ensembl	74_37	-1	known	silent	c.3363	p.Q1121	1.000	NULL	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL2	HGNC	ENSG00000104093				49	0	0	27	18	40
WDR72	0	genome.wustl.edu	37	15	54005019	54005019	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	54005019	54005019	A	G	SNP	WDR72	ENST00000360509	human	ensembl	74_37	-1	known	missense	c.661	p.C221R	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415				23	0	0	16	12	42.8571
RAB27A	0	genome.wustl.edu	37	15	55497750	55497750	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	55497750	55497750	C	T	SNP	RAB27A	ENST00000336787	human	ensembl	74_37	-1	known	silent	c.621	p.T207	0.000	superfamily_P-loop_NTPase,smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Ras,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB27A	HGNC	ENSG00000069974				141	0	0	68	44	39.2857
ANXA2	0	genome.wustl.edu	37	15	60674549	60674549	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	60674549	60674549	T	G	SNP	ANXA2	ENST00000332680	human	ensembl	74_37	-1	known	missense	c.194	p.K65T	1.000	pfam_Annexin_repeat,prints_Annexin	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinII,prints_AnnexinV	-	no_errors	ANXA2	HGNC	ENSG00000182718				35	0	0	19	10	34.4828
DPP8	0	genome.wustl.edu	37	15	65771345	65771345	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	65771345	65771345	A	G	SNP	DPP8	ENST00000341861	human	ensembl	74_37	-1	known	silent	c.1377	p.S459	0.998	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP8	HGNC	ENSG00000074603				38	0	0	16	14	46.6667
PML	0	genome.wustl.edu	37	15	74336586	74336586	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	74336586	74336586	C	T	SNP	PML	ENST00000268058	human	ensembl	74_37	+1	known	missense	c.1886	p.A629V	0.361	NULL	pfam_DUF3583,pfam_Znf_B-box,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	PML	HGNC	ENSG00000140464				80	0	0	61	35	36.4583
SIN3A	0	genome.wustl.edu	37	15	75687179	75687179	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	75687179	75687179	G	A	SNP	SIN3A	ENST00000360439	human	ensembl	74_37	-1	known	nonsense	c.2119	p.R707*	1.000	NULL	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3A	HGNC	ENSG00000169375				100	0	0	55	38	40.8602
ZNF592	0	genome.wustl.edu	37	15	85341639	85341639	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	85341639	85341639	C	T	SNP	ZNF592	ENST00000299927	human	ensembl	74_37	+1	known	silent	c.2670	p.G890	0.401	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716				84	0	0	31	26	45.614
ACAN	0	genome.wustl.edu	37	15	89398171	89398171	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	89398171	89398171	G	T	SNP	ACAN	ENST00000439576	human	ensembl	74_37	+1	known	missense	c.2355	p.E785D	0.000	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766				10	0	0	4	4	50
CHD2	0	genome.wustl.edu	37	15	93528850	93528850	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	93528850	93528850	G	A	SNP	CHD2	ENST00000557381	human	ensembl	74_37	+1	putative	silent	c.3360	p.P1120	0.579	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575				99	0	0	58	29	33.3333
MCTP2	0	genome.wustl.edu	37	15	94983445	94983445	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	94983445	94983445	T	C	SNP	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	missense	c.2126	p.I709T	1.000	NULL	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	MCTP2	HGNC	ENSG00000140563				206	0	0	72	63	46.6667
KIAA0430	0	genome.wustl.edu	37	16	15703435	15703435	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	15703435	15703435	T	C	SNP	KIAA0430	ENST00000396368	human	ensembl	74_37	-1	known	missense	c.3899	p.Y1300C	1.000	NULL	pfam_Limkain_b1_cons_dom,pfam_NYN_limkain-b1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	KIAA0430	HGNC	ENSG00000166783				53	0	0	20	16	44.4444
ENSG00000263065	0	genome.wustl.edu	37	16	15835278	15835278	+	RNA	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	15835278	15835278	G	T	SNP	ENSG00000263065	ENST00000577048	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AF001548.6	Clone_based_vega_gene	ENSG00000263065				92	0	0	57	45	44.1176
NME3	0	genome.wustl.edu	37	16	1820969	1820969	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	1820969	1820969	C	T	SNP	NME3	ENST00000219302	human	ensembl	74_37	-1	known	missense	c.305	p.R102H	0.001	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,prints_Nucleoside_diP_kinase	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,prints_Nucleoside_diP_kinase	-	no_errors	NME3	HGNC	ENSG00000103024				22	0	0	25	18	41.8605
SMG1	0	genome.wustl.edu	37	16	18846365	18846365	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	18846365	18846365	G	A	SNP	SMG1	ENST00000389467	human	ensembl	74_37	-1	known	missense	c.8179	p.R2727C	1.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106				164	0	0	98	70	41.6667
GDE1	0	genome.wustl.edu	37	16	19514884	19514884	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	19514884	19514884	T	C	SNP	GDE1	ENST00000353258	human	ensembl	74_37	-1	known	missense	c.904	p.N302D	0.998	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDE1	HGNC	ENSG00000006007				80	0	0	29	24	45.283
HS3ST6	0	genome.wustl.edu	37	16	1961987	1961987	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	1961987	1961987	G	A	SNP	HS3ST6	ENST00000293937	human	ensembl	74_37	-1	known	silent	c.633	p.H211	0.966	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST6	HGNC	ENSG00000162040				28	0	0	24	17	41.4634
GPRC5B	0	genome.wustl.edu	37	16	19883731	19883731	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	19883731	19883731	C	T	SNP	GPRC5B	ENST00000537135	human	ensembl	74_37	-1	known	missense	c.515	p.R172H	0.999	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5B	HGNC	ENSG00000167191				42	0	0	32	27	45.7627
SNORA64	0	genome.wustl.edu	37	16	2013028	2013028	+	RNA	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	2013028	2013028	T	C	SNP	SNORA64	ENST00000384674	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORA64	HGNC	ENSG00000207405				54	0	0	29	24	45.283
DNAH3	0	genome.wustl.edu	37	16	20976175	20976175	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	20976175	20976175	C	T	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	missense	c.9031	p.A3011T	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486				66	0	0	25	18	41.8605
POLR3E	0	genome.wustl.edu	37	16	22320299	22320299	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	22320299	22320299	A	G	SNP	POLR3E	ENST00000564750	human	ensembl	74_37	+1	known	missense	c.169	p.R57G	1.000	NULL	pfam_RNA_pol_III_Rpc5	-	no_errors	POLR3E	HGNC	ENSG00000058600				54	0	0	78	13	14.2857
MLST8	0	genome.wustl.edu	37	16	2258654	2258654	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	2258654	2258654	C	T	SNP	MLST8	ENST00000301724	human	ensembl	74_37	+1	putative	missense	c.902	p.A301V	0.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MLST8	HGNC	ENSG00000167965				80	0	0	69	41	37.2727
CCNF	0	genome.wustl.edu	37	16	2481176	2481176	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	2481176	2481176	G	A	SNP	CCNF	ENST00000397066	human	ensembl	74_37	+1	known	missense	c.62	p.R21Q	1.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,pfam_F-box_dom,superfamily_Cyclin-like,superfamily_F-box_dom,smart_F-box_dom,smart_Cyclin-like,pfscan_F-box_dom	-	no_errors	CCNF	HGNC	ENSG00000162063				105	0	0	45	31	40.7895
CCNF	0	genome.wustl.edu	37	16	2489443	2489443	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	2489443	2489443	C	T	SNP	CCNF	ENST00000397066	human	ensembl	74_37	+1	known	silent	c.684	p.S228	0.166	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,pfam_F-box_dom,superfamily_Cyclin-like,superfamily_F-box_dom,smart_F-box_dom,smart_Cyclin-like,pfscan_F-box_dom	-	no_errors	CCNF	HGNC	ENSG00000162063				14	0	0	10	5	33.3333
XPO6	0	genome.wustl.edu	37	16	28112798	28112798	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	28112798	28112798	C	T	SNP	XPO6	ENST00000304658	human	ensembl	74_37	-1	known	missense	c.3257	p.R1086Q	1.000	NULL	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO6	HGNC	ENSG00000169180				37	0	0	29	20	40.8163
C16orf92	0	genome.wustl.edu	37	16	30035069	30035069	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	30035069	30035069	C	T	SNP	C16orf92	ENST00000300575	human	ensembl	74_37	+1	known	missense	c.152	p.T51M	0.000	NULL	NULL	-	no_errors	C16orf92	HGNC	ENSG00000167194				29	0	0	21	15	41.6667
PHKG2	0	genome.wustl.edu	37	16	30768156	30768156	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	30768156	30768156	G	A	SNP	PHKG2	ENST00000563588	human	ensembl	74_37	+1	known	missense	c.959	p.R320Q	1.000	superfamily_Kinase-like_dom,prints_Phosph_kin_gamma	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Phosph_kin_gamma,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PHKG2	HGNC	ENSG00000156873				133	0	0	90	53	37.0629
MMP25	0	genome.wustl.edu	37	16	3100297	3100297	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	3100297	3100297	C	T	SNP	MMP25	ENST00000336577	human	ensembl	74_37	+1	known	silent	c.411	p.T137	0.000	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP25	HGNC	ENSG00000008516				70	0	0	42	31	42.4658
IL32	0	genome.wustl.edu	37	16	3119141	3119141	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	3119141	3119141	C	T	SNP	IL32	ENST00000396890	human	ensembl	74_37	+1	known	missense	c.490	p.R164W	0.000	NULL	NULL	-	no_errors	IL32	HGNC	ENSG00000008517				40	0	0	23	11	32.3529
ITGAD	0	genome.wustl.edu	37	16	31426253	31426253	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	31426253	31426253	T	C	SNP	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	missense	c.2224	p.S742P	0.002	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886				85	0	0	54	22	28.9474
NLRC3	0	genome.wustl.edu	37	16	3613679	3613679	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	3613679	3613679	A	C	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.1400	p.M467R	1.000	NULL	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984				31	0	0	23	13	36.1111
SLX4	0	genome.wustl.edu	37	16	3641292	3641292	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	3641292	3641292	C	T	SNP	SLX4	ENST00000294008	human	ensembl	74_37	-1	known	missense	c.2347	p.V783I	0.001	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	SLX4	HGNC	ENSG00000188827				83	0	0	53	6	10.1695
MYLK3	0	genome.wustl.edu	37	16	46763518	46763518	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	46763518	46763518	G	A	SNP	MYLK3	ENST00000394809	human	ensembl	74_37	-1	known	silent	c.1650	p.S550	0.081	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MYLK3	HGNC	ENSG00000140795				55	0	0	40	20	33.3333
RPGRIP1L	0	genome.wustl.edu	37	16	53692344	53692344	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	53692344	53692344	T	G	SNP	RPGRIP1L	ENST00000379925	human	ensembl	74_37	-1	known	missense	c.1383	p.E461D	1.000	NULL	pfam_DUF3250,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RPGRIP1L	HGNC	ENSG00000103494				38	0	0	18	3	14.2857
CDH16	0	genome.wustl.edu	37	16	66946430	66946430	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	66946430	66946430	C	T	SNP	CDH16	ENST00000299752	human	ensembl	74_37	-1	known	missense	c.1336	p.A446T	0.980	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH16	HGNC	ENSG00000166589				63	0	0	31	23	42.5926
ELMO3	0	genome.wustl.edu	37	16	67234150	67234150	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	67234150	67234150	G	A	SNP	ELMO3	ENST00000393997	human	ensembl	74_37	+1	known	missense	c.458	p.R153H	1.000	superfamily_ARM-type_fold	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO3	HGNC	ENSG00000102890				30	0	0	20	11	35.4839
DUS2	0	genome.wustl.edu	37	16	68109393	68109393	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	68109393	68109393	T	C	SNP	DUS2	ENST00000358896	human	ensembl	74_37	+1	known	silent	c.1068	p.A356	0.995	NULL	pfam_tRNA_hU_synthase,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom	-	no_errors	DUS2	HGNC	ENSG00000167264				17	0	0	13	6	31.5789
PRMT7	0	genome.wustl.edu	37	16	68373281	68373281	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	68373281	68373281	C	T	SNP	PRMT7	ENST00000339507	human	ensembl	74_37	+1	known	silent	c.561	p.S187	0.439	pirsf_Arg_MeTrfase_PRMT7	pfam_Ribosomal-L11_MeTrfase_PrmA,pirsf_Arg_MeTrfase_PRMT7	-	no_errors	PRMT7	HGNC	ENSG00000132600				75	0	0	67	35	34.3137
CHST4	0	genome.wustl.edu	37	16	71571181	71571181	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	71571181	71571181	G	A	SNP	CHST4	ENST00000338482	human	ensembl	74_37	+1	known	missense	c.601	p.V201M	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST4	HGNC	ENSG00000140835				51	0	0	36	36	50
RFWD3	0	genome.wustl.edu	37	16	74670377	74670377	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	74670377	74670377	C	T	SNP	RFWD3	ENST00000361070	human	ensembl	74_37	-1	known	silent	c.1293	p.Q431	1.000	NULL	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING	-	no_errors	RFWD3	HGNC	ENSG00000168411				54	0	0	47	26	35.6164
RBFOX1	0	genome.wustl.edu	37	16	7680608	7680608	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	7680608	7680608	C	T	SNP	RBFOX1	ENST00000547372	human	ensembl	74_37	+1	known	missense	c.809	p.T270M	1.000	pirsf_RNA-bd_Fox-1	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC	ENSG00000078328				33	0	0	29	9	23.6842
ADAMTS18	0	genome.wustl.edu	37	16	77353960	77353960	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	77353960	77353960	C	T	SNP	ADAMTS18	ENST00000282849	human	ensembl	74_37	-1	known	missense	c.2318	p.G773D	1.000	pfam_ADAM_spacer1	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS18	HGNC	ENSG00000140873				59	0	0	33	19	36.5385
TLDC1	0	genome.wustl.edu	37	16	84522882	84522882	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	84522882	84522882	G	A	SNP	TLDC1	ENST00000343629	human	ensembl	74_37	-1	known	splice_site	c.529+2	e3+2	1.000	-	-	-	no_errors	TLDC1	HGNC	ENSG00000140950				42	0	0	30	18	37.5
TLDC1	0	genome.wustl.edu	37	16	84531619	84531619	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	84531619	84531619	T	C	SNP	TLDC1	ENST00000343629	human	ensembl	74_37	-1	known	missense	c.74	p.D25G	0.046	NULL	pfam_TLDc,smart_TLDc	-	no_errors	TLDC1	HGNC	ENSG00000140950				173	0	0	85	70	45.1613
MTHFSD	0	genome.wustl.edu	37	16	86565765	86565765	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	86565765	86565765	C	T	SNP	MTHFSD	ENST00000360900	human	ensembl	74_37	-1	known	missense	c.1004	p.R335Q	0.889	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_FTHF_cligase,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MTHFSD	HGNC	ENSG00000103248				13	0	0	12	12	50
CBFA2T3	0	genome.wustl.edu	37	16	88958765	88958765	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	88958765	88958765	C	T	SNP	CBFA2T3	ENST00000268679	human	ensembl	74_37	-1	known	missense	c.508	p.G170R	1.000	NULL	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG16	-	no_errors	CBFA2T3	HGNC	ENSG00000129993				38	0	0	22	14	38.8889
MYH2	0	genome.wustl.edu	37	17	10428368	10428368	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	10428368	10428368	A	G	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	silent	c.4677	p.H1559	0.800	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414				106	0	0	42	37	46.8354
MYO1C	0	genome.wustl.edu	37	17	1381382	1381382	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	1381382	1381382	G	A	SNP	MYO1C	ENST00000359786	human	ensembl	74_37	-1	known	missense	c.1400	p.A467V	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1C	HGNC	ENSG00000197879				86	0	0	116	11	8.66142
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				65	0	0	51	20	28.169
ZSWIM7	0	genome.wustl.edu	37	17	15890645	15890645	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	15890645	15890645	A	G	SNP	ZSWIM7	ENST00000399277	human	ensembl	74_37	-1	known	silent	c.136	p.L46	1.000	NULL	pfam_Znf_SWIM,pfscan_Znf_SWIM	-	no_errors	ZSWIM7	HGNC	ENSG00000214941				33	0	0	15	2	11.7647
RAI1	0	genome.wustl.edu	37	17	17698048	17698048	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	17698048	17698048	C	T	SNP	RAI1	ENST00000353383	human	ensembl	74_37	+1	known	missense	c.1786	p.R596W	0.816	NULL	smart_Znf_PHD	-	no_errors	RAI1	HGNC	ENSG00000108557				100	0	0	82	46	35.9375
MYO15A	0	genome.wustl.edu	37	17	18022386	18022386	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	18022386	18022386	G	A	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.272	p.R91H	0.936	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				18	0	0	17	11	39.2857
MYO15A	0	genome.wustl.edu	37	17	18054840	18054840	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	18054840	18054840	A	G	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.7786	p.R2596G	0.999	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				55	0	0	52	27	34.1772
MIEF2	0	genome.wustl.edu	37	17	18167652	18167652	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	18167652	18167652	C	T	SNP	MIEF2	ENST00000323019	human	ensembl	74_37	+1	known	silent	c.939	p.D313	0.000	NULL	NULL	-	no_errors	MIEF2	HGNC	ENSG00000177427				72	0	0	75	45	37.5
MAP2K3	0	genome.wustl.edu	37	17	21203893	21203893	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	21203893	21203893	T	C	SNP	MAP2K3	ENST00000342679	human	ensembl	74_37	+1	known	missense	c.202	p.S68P	0.060	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K3	HGNC	ENSG00000034152				11	0	0	13	5	27.7778
KSR1	0	genome.wustl.edu	37	17	25909964	25909964	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	25909964	25909964	G	A	SNP	KSR1	ENST00000319524	human	ensembl	74_37	+1	known	silent	c.813	p.P271	0.261	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	KSR1	HGNC	ENSG00000141068				13	0	0	16	11	40.7407
ERAL1	0	genome.wustl.edu	37	17	27182060	27182060	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	27182060	27182060	C	T	SNP	ERAL1	ENST00000254928	human	ensembl	74_37	+1	known	missense	c.8	p.A3V	0.975	NULL	pfam_GTP_binding_domain,pfam_MIRO-like,pfam_Dynamin_GTPase,pfam_AIG1,pfam_EF_GTP-bd_dom,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,superfamily_KH_prok-type,prints_GTP_binding_domain,tigrfam_Small_GTP-bd_dom	-	no_errors	ERAL1	HGNC	ENSG00000132591				37	0	0	40	35	46.6667
ACACA	0	genome.wustl.edu	37	17	35641758	35641758	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	35641758	35641758	C	T	SNP	ACACA	ENST00000353139	human	ensembl	74_37	-1	known	missense	c.452	p.G151E	1.000	superfamily_PreATP-grasp_dom	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACA	HGNC	ENSG00000132142				91	0	0	38	36	48.6486
WIPF2	0	genome.wustl.edu	37	17	38412743	38412743	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	38412743	38412743	C	T	SNP	WIPF2	ENST00000323571	human	ensembl	74_37	+1	known	missense	c.32	p.P11L	1.000	NULL	smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WIPF2	HGNC	ENSG00000171475				64	0	0	42	34	44.7368
FKBP10	0	genome.wustl.edu	37	17	39977935	39977935	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	39977935	39977935	C	T	SNP	FKBP10	ENST00000321562	human	ensembl	74_37	+1	known	silent	c.1429	p.L477	0.327	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	pfam_PPIase_FKBP_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP10	HGNC	ENSG00000141756				61	0	0	59	28	32.1839
ANKFY1	0	genome.wustl.edu	37	17	4075887	4075887	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	4075887	4075887	A	G	SNP	ANKFY1	ENST00000570535	human	ensembl	74_37	-1	known	missense	c.3229	p.Y1077H	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Znf_FYVE,pfam_BTB_POZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_BTB/POZ_fold,superfamily_Znf_FYVE_PHD,smart_BTB/POZ-like,smart_Ankyrin_rpt,smart_Znf_FYVE,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like,pfscan_Znf_FYVE-rel,prints_Ankyrin_rpt	-	no_errors	ANKFY1	HGNC	ENSG00000185722				79	0	0	40	35	46.6667
NBR1	0	genome.wustl.edu	37	17	41345516	41345516	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	41345516	41345516	C	T	SNP	NBR1	ENST00000341165	human	ensembl	74_37	+1	known	missense	c.1385	p.S462F	1.000	NULL	pfam_OPR_PB1,pfam_Znf_ZZ,superfamily_UBA-like,smart_OPR_PB1,smart_Znf_ZZ,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_ZZ	-	no_errors	NBR1	HGNC	ENSG00000188554				24	0	0	13	13	50
ATXN7L3	0	genome.wustl.edu	37	17	42274991	42274991	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	42274991	42274991	C	T	SNP	ATXN7L3	ENST00000454077	human	ensembl	74_37	-1	known	silent	c.159	p.T53	0.998	NULL	pfam_SAGA_su_Sgf11,pfam_SCA7_dom	-	no_errors	ATXN7L3	HGNC	ENSG00000087152				145	0	0	97	61	38.6076
TBX21	0	genome.wustl.edu	37	17	45822626	45822626	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	45822626	45822626	G	A	SNP	TBX21	ENST00000177694	human	ensembl	74_37	+1	known	missense	c.1502	p.R501H	0.996	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX21	HGNC	ENSG00000073861				39	0	0	31	16	34.0426
LOC100288866	0	genome.wustl.edu	37	17	47583530	47583530	+	RNA	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	47583530	47583530	T	C	SNP	LOC100288866	ENST00000514506	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP5-1029K10.2	Clone_based_vega_gene	ENSG00000249906				10	0	0	12	5	29.4118
SGCA	0	genome.wustl.edu	37	17	48246578	48246578	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	48246578	48246578	C	T	SNP	SGCA	ENST00000262018	human	ensembl	74_37	+1	known	missense	c.710	p.A237V	0.884	pfam_Sarcoglycan_2	pfam_Sarcoglycan_2,superfamily_Cadherin-like,smart_Cadg	-	no_errors	SGCA	HGNC	ENSG00000108823				41	0	0	40	17	29.8246
PCTP	0	genome.wustl.edu	37	17	53851055	53851055	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	53851055	53851055	G	A	SNP	PCTP	ENST00000417982	human	ensembl	74_37	+1	known	missense	c.178	p.V60I	0.000	NULL	pfam_START_lipid-bd_dom	-	no_errors	PCTP	HGNC	ENSG00000141179				17	0	0	22	9	29.0323
NLRP1	0	genome.wustl.edu	37	17	5462048	5462048	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	5462048	5462048	C	T	SNP	NLRP1	ENST00000572272	human	ensembl	74_37	-1	known	silent	c.1968	p.T656	0.000	NULL	pfam_CARD,pfam_DAPIN,pfam_Leu-rich_rpt,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD,pfscan_DAPIN,prints_Disease_R	-	no_errors	NLRP1	HGNC	ENSG00000091592				141	0	0	66	39	37.1429
DYNLL2	0	genome.wustl.edu	37	17	56166533	56166533	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	56166533	56166533	C	T	SNP	DYNLL2	ENST00000579991	human	ensembl	74_37	+1	known	missense	c.163	p.H55Y	1.000	pfam_Dynein_light_chain_typ-1/2	pfam_Dynein_light_chain_typ-1/2	-	no_errors	DYNLL2	HGNC	ENSG00000264364				89	0	0	63	34	35.0515
MAP3K3	0	genome.wustl.edu	37	17	61769160	61769160	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	61769160	61769160	G	A	SNP	MAP3K3	ENST00000361357	human	ensembl	74_37	+1	known	missense	c.1505	p.R502Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K3	HGNC	ENSG00000198909				146	0	0	123	70	36.2694
SCN4A	0	genome.wustl.edu	37	17	62019107	62019107	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	62019107	62019107	C	T	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.4535	p.G1512D	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314				72	0	0	44	28	38.8889
SCN4A	0	genome.wustl.edu	37	17	62038590	62038590	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	62038590	62038590	G	A	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.1808	p.T603M	0.982	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314				78	0	0	37	22	37.2881
RGS9	0	genome.wustl.edu	37	17	63221121	63221121	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	63221121	63221121	C	T	SNP	RGS9	ENST00000262406	human	ensembl	74_37	+1	known	missense	c.1409	p.P470L	0.766	NULL	pfam_RGS_dom,pfam_G-protein_gamma-like_dom,pfam_DEP_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_G-protein_gamma-like_dom,smart_DEP_dom,smart_G-protein_gamma-like_dom,smart_Regulat_G_prot_signal_superfam,pfscan_DEP_dom,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS9	HGNC	ENSG00000108370				125	0	0	116	65	35.9116
CACNG1	0	genome.wustl.edu	37	17	65052208	65052208	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	65052208	65052208	C	T	SNP	CACNG1	ENST00000226021	human	ensembl	74_37	+1	known	missense	c.490	p.R164C	1.000	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_g1su,prints_VDCC_gsu	-	no_errors	CACNG1	HGNC	ENSG00000108878				60	0	0	56	27	32.5301
ITGB4	0	genome.wustl.edu	37	17	73728294	73728294	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	73728294	73728294	C	T	SNP	ITGB4	ENST00000200181	human	ensembl	74_37	+1	known	silent	c.1428	p.C476	0.984	pirsf_Integrin_bsu-4,pfam_EGF_extracell	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,prints_Integrin_bsu,pfscan_Fibronectin_type3	-	no_errors	ITGB4	HGNC	ENSG00000132470				57	0	0	38	20	34.4828
ITGB4	0	genome.wustl.edu	37	17	73753610	73753610	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	73753610	73753610	A	G	SNP	ITGB4	ENST00000200181	human	ensembl	74_37	+1	known	missense	c.5443	p.M1815V	0.870	pirsf_Integrin_bsu-4	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,prints_Integrin_bsu,pfscan_Fibronectin_type3	-	no_errors	ITGB4	HGNC	ENSG00000132470				73	0	0	67	34	33.6634
EXOC7	0	genome.wustl.edu	37	17	74087253	74087253	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	74087253	74087253	T	C	SNP	EXOC7	ENST00000335146	human	ensembl	74_37	-1	known	missense	c.872	p.K291R	1.000	superfamily_Cullin_repeat-like_dom	pfam_Exo70,superfamily_Cullin_repeat-like_dom	-	no_errors	EXOC7	HGNC	ENSG00000182473				145	0	0	99	47	32.1918
JMJD6	0	genome.wustl.edu	37	17	74714828	74714828	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	74714828	74714828	G	A	SNP	JMJD6	ENST00000445478	human	ensembl	74_37	-1	known	missense	c.1195	p.R399C	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD6	HGNC	ENSG00000070495				60	0	0	47	28	37.3333
CBX8	0	genome.wustl.edu	37	17	77769309	77769309	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	77769309	77769309	C	G	SNP	CBX8	ENST00000269385	human	ensembl	74_37	-1	known	missense	c.295	p.A99P	0.291	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CBX8	HGNC	ENSG00000141570				13	0	0	11	8	42.1053
CCDC40	0	genome.wustl.edu	37	17	78039288	78039288	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	78039288	78039288	G	A	SNP	CCDC40	ENST00000397545	human	ensembl	74_37	+1	known	missense	c.1445	p.C482Y	0.776	NULL	pfam_E3_ubiquit_lig_BRE1	-	no_errors	CCDC40	HGNC	ENSG00000141519				70	0	0	72	47	39.4958
CARD14	0	genome.wustl.edu	37	17	78182049	78182049	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	78182049	78182049	G	T	SNP	CARD14	ENST00000344227	human	ensembl	74_37	+1	known	missense	c.2920	p.G974C	0.701	superfamily_P-loop_NTPase,pfscan_Guanylate_kin-like	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD,pfscan_PDZ,pfscan_Guanylate_kin-like	-	no_errors	CARD14	HGNC	ENSG00000141527				9	0	0	11	3	21.4286
SLC26A11	0	genome.wustl.edu	37	17	78210671	78210671	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	78210671	78210671	G	A	SNP	SLC26A11	ENST00000571564	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC26A11	HGNC	ENSG00000181045				96	0	0	108	87	44.6154
RPTOR	0	genome.wustl.edu	37	17	78938200	78938200	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	78938200	78938200	C	T	SNP	RPTOR	ENST00000575542	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RPTOR	HGNC	ENSG00000141564				20	0	0	18	20	52.6316
AZI1	0	genome.wustl.edu	37	17	79173252	79173252	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	79173252	79173252	C	T	SNP	AZI1	ENST00000269392	human	ensembl	74_37	-1	known	missense	c.1121	p.R374Q	0.000	NULL	superfamily_t-SNARE	-	no_errors	AZI1	HGNC	ENSG00000141577				13	0	0	8	6	42.8571
ENSG00000262115	0	genome.wustl.edu	37	17	79173661	79173661	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	79173661	79173661	G	A	SNP	ENSG00000262115	ENST00000571085	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-455O6.2	Clone_based_vega_gene	ENSG00000262115				94	0	0	79	54	40.6015
C17orf70	0	genome.wustl.edu	37	17	79511074	79511074	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	79511074	79511074	C	T	SNP	C17orf70	ENST00000327787	human	ensembl	74_37	-1	known	missense	c.2383	p.A795T	0.998	NULL	NULL	-	no_errors	C17orf70	HGNC	ENSG00000185504				37	0	0	39	30	43.4783
PYCR1	0	genome.wustl.edu	37	17	79893246	79893246	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	79893246	79893246	G	A	SNP	PYCR1	ENST00000329875	human	ensembl	74_37	-1	known	silent	c.285	p.C95	0.987	pfam_G3P_DH_NAD-dep_N,pirsf_Pyrroline-COOH_reductase,tigrfam_Pyrroline-COOH_reductase	pfam_G3P_DH_NAD-dep_N,superfamily_6-PGluconate_DH_C-like,pirsf_Pyrroline-COOH_reductase,tigrfam_Pyrroline-COOH_reductase	-	no_errors	PYCR1	HGNC	ENSG00000183010				25	0	0	27	16	37.2093
FASN	0	genome.wustl.edu	37	17	80048771	80048771	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	80048771	80048771	A	G	SNP	FASN	ENST00000306749	human	ensembl	74_37	-1	known	missense	c.1667	p.L556P	0.999	pfam_Acyl_transferase,superfamily_Acyl_Trfase/lysoPLipase,smart_PKS_acyl_transferase	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710				11	0	0	8	3	27.2727
RCVRN	0	genome.wustl.edu	37	17	9804342	9804342	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	9804342	9804342	C	T	SNP	RCVRN	ENST00000226193	human	ensembl	74_37	-1	known	missense	c.457	p.E153K	0.997	smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	RCVRN	HGNC	ENSG00000109047				61	0	0	33	11	25
DSC3	0	genome.wustl.edu	37	18	28586948	28586948	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	28586948	28586948	C	T	SNP	DSC3	ENST00000360428	human	ensembl	74_37	-1	known	missense	c.1813	p.G605R	0.085	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin,prints_Desmosomal_cadherin	-	no_errors	DSC3	HGNC	ENSG00000134762				43	0	0	24	18	42.8571
SLC25A52	0	genome.wustl.edu	37	18	29340010	29340010	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	29340010	29340010	C	T	SNP	SLC25A52	ENST00000269205	human	ensembl	74_37	-1	known	silent	c.645	p.T215	0.000	superfamily_Mt_carrier_dom	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A52	HGNC	ENSG00000141437				92	0	0	39	28	41.791
RNF138	0	genome.wustl.edu	37	18	29693753	29693753	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	29693753	29693753	T	C	SNP	RNF138	ENST00000261593	human	ensembl	74_37	+1	known	missense	c.322	p.Y108H	1.000	NULL	pfam_Znf_MIZ,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF138	HGNC	ENSG00000134758				35	0	0	9	17	65.3846
ASXL3	0	genome.wustl.edu	37	18	31319791	31319791	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	31319791	31319791	C	T	SNP	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	missense	c.2423	p.P808L	0.141	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431				42	0	0	20	20	50
TCEB3B	0	genome.wustl.edu	37	18	44560469	44560469	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	44560469	44560469	G	A	SNP	TCEB3B	ENST00000332567	human	ensembl	74_37	-1	known	silent	c.1167	p.Y389	0.000	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3B	HGNC	ENSG00000206181				72	0	0	46	25	35.2113
MYO5B	0	genome.wustl.edu	37	18	47383217	47383217	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	47383217	47383217	C	T	SNP	MYO5B	ENST00000285039	human	ensembl	74_37	-1	known	missense	c.3988	p.G1330S	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306				51	0	0	21	15	41.6667
CDH7	0	genome.wustl.edu	37	18	63530035	63530035	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	63530035	63530035	G	A	SNP	CDH7	ENST00000323011	human	ensembl	74_37	+1	known	silent	c.1746	p.V582	0.988	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC	ENSG00000081138				39	0	0	29	16	35.5556
ZNF407	0	genome.wustl.edu	37	18	72343856	72343856	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	72343856	72343856	G	A	SNP	ZNF407	ENST00000299687	human	ensembl	74_37	+1	known	missense	c.881	p.R294H	0.006	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_U1,pfscan_Znf_C2H2	-	no_errors	ZNF407	HGNC	ENSG00000215421				80	0	0	37	31	45.5882
NFATC1	0	genome.wustl.edu	37	18	77208862	77208862	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	77208862	77208862	C	T	SNP	NFATC1	ENST00000427363	human	ensembl	74_37	+1	known	silent	c.1467	p.H489	0.994	pfam_RHD,superfamily_p53-like_TF_DNA-bd,pfscan_RHD	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC1	HGNC	ENSG00000131196				58	0	0	37	39	51.3158
ANKRD12	0	genome.wustl.edu	37	18	9280973	9280973	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	9280973	9280973	C	T	SNP	ANKRD12	ENST00000262126	human	ensembl	74_37	+1	known	missense	c.6038	p.A2013V	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD12	HGNC	ENSG00000101745				75	0	0	43	28	39.4366
S1PR5	0	genome.wustl.edu	37	19	10624718	10624718	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	10624718	10624718	C	T	SNP	S1PR5	ENST00000333430	human	ensembl	74_37	-1	known	missense	c.970	p.G324R	0.002	prints_EDG8_S1P_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_EDG8_S1P_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn	-	no_errors	S1PR5	HGNC	ENSG00000180739				28	0	0	28	24	46.1538
PRKCSH	0	genome.wustl.edu	37	19	11558289	11558289	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	11558289	11558289	T	C	SNP	PRKCSH	ENST00000252455	human	ensembl	74_37	+1	known	silent	c.885	p.P295	0.004	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_LDrepeatLR_classA_rpt,pfscan_EF_hand_dom	-	no_errors	PRKCSH	HGNC	ENSG00000130175				18	0	0	16	16	50
ZNF709	0	genome.wustl.edu	37	19	12576151	12576151	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	12576151	12576151	A	G	SNP	ZNF709	ENST00000397732	human	ensembl	74_37	-1	known	silent	c.585	p.P195	0.021	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_Znf_C2H2_jaz,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF709	HGNC	ENSG00000242852				79	0	0	38	34	47.2222
RNASEH2A	0	genome.wustl.edu	37	19	12918303	12918303	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	12918303	12918303	G	A	SNP	RNASEH2A	ENST00000221486	human	ensembl	74_37	+1	known	missense	c.394	p.G132S	1.000	pfam_RNase_HII/HIII_dom,superfamily_RNaseH-like_dom,tigrfam_RNase_H2_suA	pfam_RNase_HII/HIII_dom,superfamily_RNaseH-like_dom,tigrfam_RNase_H2_suA	-	no_errors	RNASEH2A	HGNC	ENSG00000104889				65	0	0	31	21	40.3846
LPHN1	0	genome.wustl.edu	37	19	14281586	14281586	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	14281586	14281586	T	C	SNP	LPHN1	ENST00000340736	human	ensembl	74_37	-1	known	missense	c.302	p.Q101R	1.000	pfam_Lectin_gal-bd_dom,pfscan_Lectin_gal-bd_dom,prints_GPCR_2_latrophilin	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN1	HGNC	ENSG00000072071				20	0	0	13	11	45.8333
MEX3D	0	genome.wustl.edu	37	19	1556717	1556717	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	1556717	1556717	C	T	SNP	MEX3D	ENST00000388824	human	ensembl	74_37	-1	known	silent	c.801	p.P267	0.975	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3D	HGNC	ENSG00000181588				30	0	0	30	26	46.4286
MBD3	0	genome.wustl.edu	37	19	1581217	1581217	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	1581217	1581217	G	A	SNP	MBD3	ENST00000156825	human	ensembl	74_37	-1	known	missense	c.551	p.A184V	1.000	NULL	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD3	HGNC	ENSG00000071655				27	0	0	44	4	8.33333
EPS15L1	0	genome.wustl.edu	37	19	16536014	16536014	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	16536014	16536014	G	A	SNP	EPS15L1	ENST00000455140	human	ensembl	74_37	-1	known	silent	c.672	p.P224	0.002	NULL	superfamily_Prefoldin,smart_EPS15_homology,smart_EF_hand_dom,smart_Ubiquitin-int_motif,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_Ubiquitin-int_motif	-	no_errors	EPS15L1	HGNC	ENSG00000127527				45	0	0	78	6	7.14286
MAST3	0	genome.wustl.edu	37	19	18245776	18245776	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	18245776	18245776	C	T	SNP	MAST3	ENST00000262811	human	ensembl	74_37	+1	known	silent	c.1767	p.F589	0.990	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST3	HGNC	ENSG00000099308				66	0	0	63	47	42.7273
ELL	0	genome.wustl.edu	37	19	18557573	18557573	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	18557573	18557573	G	A	SNP	ELL	ENST00000262809	human	ensembl	74_37	-1	known	missense	c.1517	p.T506M	0.750	NULL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL	HGNC	ENSG00000105656				22	0	0	13	6	31.5789
ATP13A1	0	genome.wustl.edu	37	19	19758333	19758333	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	19758333	19758333	C	T	SNP	ATP13A1	ENST00000357324	human	ensembl	74_37	-1	known	missense	c.2798	p.R933H	1.000	tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A1	HGNC	ENSG00000105726				21	0	0	19	11	36.6667
ATP13A1	0	genome.wustl.edu	37	19	19766196	19766196	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	19766196	19766196	A	G	SNP	ATP13A1	ENST00000357324	human	ensembl	74_37	-1	known	missense	c.1463	p.V488A	0.952	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A1	HGNC	ENSG00000105726				37	0	0	41	22	34.9206
ZNF429	0	genome.wustl.edu	37	19	21720332	21720332	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	21720332	21720332	T	C	SNP	ZNF429	ENST00000358491	human	ensembl	74_37	+1	novel	missense	c.1477	p.S493P	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF429	HGNC	ENSG00000197013				63	0	0	37	8	17.7778
ZNF730	0	genome.wustl.edu	37	19	23329345	23329345	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	23329345	23329345	C	T	SNP	ZNF730	ENST00000597761	human	ensembl	74_37	+1	known	missense	c.1499	p.T500I	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF730	HGNC	ENSG00000183850				18	0	0	6	6	50
ZNF91	0	genome.wustl.edu	37	19	23557561	23557561	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	23557561	23557561	C	T	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	silent	c.36	p.L12	0.472	superfamily_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232				124	0	0	62	37	37.3737
ZNF675	0	genome.wustl.edu	37	19	23836865	23836865	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	23836865	23836865	G	A	SNP	ZNF675	ENST00000359788	human	ensembl	74_37	-1	known	silent	c.870	p.G290	0.998	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF675	HGNC	ENSG00000197372				54	0	0	25	19	43.1818
TSHZ3	0	genome.wustl.edu	37	19	31769253	31769253	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	31769253	31769253	G	C	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	missense	c.1446	p.D482E	0.002	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297				257	1	0.387597	123	70	36.2694
S1PR4	0	genome.wustl.edu	37	19	3179829	3179829	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	3179829	3179829	G	A	SNP	S1PR4	ENST00000246115	human	ensembl	74_37	+1	known	missense	c.1039	p.G347R	0.005	prints_EDG6_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_EDG6_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn	-	no_errors	S1PR4	HGNC	ENSG00000125910				106	0	0	133	22	14.1935
ATP4A	0	genome.wustl.edu	37	19	36046611	36046611	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	36046611	36046611	C	T	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	missense	c.1973	p.R658H	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675				120	1	0.826446	104	84	44.6809
PIP5K1C	0	genome.wustl.edu	37	19	3633441	3633441	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	3633441	3633441	G	A	SNP	PIP5K1C	ENST00000335312	human	ensembl	74_37	-1	known	silent	c.1998	p.S666	1.000	NULL	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5K1C	HGNC	ENSG00000186111				14	0	0	9	4	30.7692
ZNF568	0	genome.wustl.edu	37	19	37441358	37441358	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	37441358	37441358	G	A	SNP	ZNF568	ENST00000333987	human	ensembl	74_37	+1	known	missense	c.1303	p.V435I	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF568	HGNC	ENSG00000198453				74	0	0	32	16	33.3333
ZNF793	0	genome.wustl.edu	37	19	38027860	38027860	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	38027860	38027860	C	T	SNP	ZNF793	ENST00000445217	human	ensembl	74_37	+1	known	silent	c.300	p.G100	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF793	HGNC	ENSG00000188227				29	0	0	15	7	31.8182
DLL3	0	genome.wustl.edu	37	19	39995901	39995901	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	39995901	39995901	G	A	SNP	DLL3	ENST00000205143	human	ensembl	74_37	+1	known	silent	c.903	p.P301	0.970	pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DLL3	HGNC	ENSG00000090932				87	0	0	70	43	38.0531
FCGBP	0	genome.wustl.edu	37	19	40398365	40398365	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	40398365	40398365	G	A	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.6602	p.A2201V	0.409	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920				150	0	0	180	33	15.493
LTBP4	0	genome.wustl.edu	37	19	41105349	41105349	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	41105349	41105349	C	T	SNP	LTBP4	ENST00000308370	human	ensembl	74_37	+1	known	silent	c.228	p.C76	0.924	NULL	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006				123	0	0	82	58	41.4286
CYP2A6	0	genome.wustl.edu	37	19	41351354	41351354	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	41351354	41351354	C	T	SNP	CYP2A6	ENST00000301141	human	ensembl	74_37	-1	known	missense	c.1006	p.G336S	0.999	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A6	HGNC	ENSG00000255974				68	0	0	33	26	44.0678
CCDC97	0	genome.wustl.edu	37	19	41822685	41822685	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	41822685	41822685	G	A	SNP	CCDC97	ENST00000269967	human	ensembl	74_37	+1	known	missense	c.443	p.R148H	0.916	NULL	pfam_DUF2052_coiled-coil	-	no_errors	CCDC97	HGNC	ENSG00000142039				54	0	0	42	32	43.2432
PRR19	0	genome.wustl.edu	37	19	42813866	42813866	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	42813866	42813866	G	A	SNP	PRR19	ENST00000341747	human	ensembl	74_37	+1	known	missense	c.130	p.D44N	0.323	NULL	NULL	-	no_errors	PRR19	HGNC	ENSG00000188368				95	0	0	75	65	46.4286
MEGF8	0	genome.wustl.edu	37	19	42856601	42856601	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	42856601	42856601	A	G	SNP	MEGF8	ENST00000251268	human	ensembl	74_37	+1	known	missense	c.3343	p.N1115D	1.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_CUB_dom,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_CUB_dom,smart_EG-like_dom,smart_Plexin-like_fold,smart_EGF-like_Ca-bd_dom,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429				11	0	0	7	6	46.1538
FSD1	0	genome.wustl.edu	37	19	4323029	4323029	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	4323029	4323029	C	T	SNP	FSD1	ENST00000221856	human	ensembl	74_37	+1	known	silent	c.1086	p.Y362	0.531	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	FSD1	HGNC	ENSG00000105255				17	0	0	17	10	37.037
ZNF221	0	genome.wustl.edu	37	19	44470960	44470960	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	44470960	44470960	C	T	SNP	ZNF221	ENST00000251269	human	ensembl	74_37	+1	known	nonsense	c.1306	p.R436*	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF221	HGNC	ENSG00000159905				73	0	0	29	21	42
BCAM	0	genome.wustl.edu	37	19	45317965	45317965	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	45317965	45317965	C	T	SNP	BCAM	ENST00000270233	human	ensembl	74_37	+1	known	silent	c.1026	p.Y342	0.023	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BCAM	HGNC	ENSG00000187244				49	0	0	45	28	38.3562
ZNF296	0	genome.wustl.edu	37	19	45575805	45575805	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	45575805	45575805	C	T	SNP	ZNF296	ENST00000303809	human	ensembl	74_37	-1	known	missense	c.482	p.R161H	0.126	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF296	HGNC	ENSG00000170684				59	0	0	52	23	30.6667
PPP1R13L	0	genome.wustl.edu	37	19	45895174	45895174	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	45895174	45895174	C	T	SNP	PPP1R13L	ENST00000360957	human	ensembl	74_37	-1	known	silent	c.1779	p.P593	0.000	superfamily_SH3_domain	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PPP1R13L	HGNC	ENSG00000104881				62	0	0	64	10	13.5135
CCDC8	0	genome.wustl.edu	37	19	46914615	46914615	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	46914615	46914615	G	A	SNP	CCDC8	ENST00000307522	human	ensembl	74_37	-1	known	missense	c.1453	p.R485C	0.752	NULL	NULL	-	no_errors	CCDC8	HGNC	ENSG00000169515				64	0	0	61	33	35.1064
SLC8A2	0	genome.wustl.edu	37	19	47951139	47951139	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	47951139	47951139	C	T	SNP	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	missense	c.1690	p.G564S	1.000	pfam_Calx_beta,smart_Calx_beta,tigrfam_Na_Ca_Ex	pfam_Calx_beta,pfam_NaCa_Exmemb,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A2	HGNC	ENSG00000118160				12	0	0	11	12	52.1739
GRIN2D	0	genome.wustl.edu	37	19	48908240	48908240	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	48908240	48908240	G	A	SNP	GRIN2D	ENST00000263269	human	ensembl	74_37	+1	known	missense	c.715	p.V239I	0.845	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2D	HGNC	ENSG00000105464				56	0	0	47	36	43.3735
SPHK2	0	genome.wustl.edu	37	19	49132911	49132911	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	49132911	49132911	C	T	SNP	SPHK2	ENST00000443164	human	ensembl	74_37	+1	known	missense	c.2032	p.R678C	0.078	NULL	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	SPHK2	HGNC	ENSG00000063176				13	0	0	7	2	22.2222
NUCB1	0	genome.wustl.edu	37	19	49404120	49404120	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	49404120	49404120	G	A	SNP	NUCB1	ENST00000263273	human	ensembl	74_37	+1	known	missense	c.67	p.A23T	0.010	NULL	pfscan_EF_hand_dom	-	no_errors	NUCB1	HGNC	ENSG00000104805				43	0	0	45	26	36.6197
HRC	0	genome.wustl.edu	37	19	49657889	49657889	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	49657889	49657889	T	C	SNP	HRC	ENST00000252825	human	ensembl	74_37	-1	known	silent	c.606	p.E202	0.000	NULL	pfam_Hist_rich_Ca-bd	-	no_errors	HRC	HGNC	ENSG00000130528				47	0	0	30	4	11.7647
PRR12	0	genome.wustl.edu	37	19	50099948	50099948	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	50099948	50099948	G	A	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	missense	c.2356	p.G786R	0.995	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464				26	0	0	22	14	38.8889
PRR12	0	genome.wustl.edu	37	19	50128792	50128792	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	50128792	50128792	G	A	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	silent	c.6039	p.P2013	0.851	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464				17	0	0	16	12	42.8571
MYH14	0	genome.wustl.edu	37	19	50764826	50764826	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	50764826	50764826	G	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	missense	c.2519	p.R840Q	1.000	superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357				17	0	0	23	15	39.4737
LRRC4B	0	genome.wustl.edu	37	19	51020885	51020885	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	51020885	51020885	G	A	SNP	LRRC4B	ENST00000389201	human	ensembl	74_37	-1	known	silent	c.2085	p.H695	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4B	HGNC	ENSG00000131409				27	0	0	30	19	38.7755
KLK5	0	genome.wustl.edu	37	19	51453318	51453318	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	51453318	51453318	G	T	SNP	KLK5	ENST00000336334	human	ensembl	74_37	-1	known	missense	c.128	p.P43H	0.003	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK5	HGNC	ENSG00000167754				19	0	0	22	12	35.2941
FPR3	0	genome.wustl.edu	37	19	52327577	52327577	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	52327577	52327577	C	T	SNP	FPR3	ENST00000339223	human	ensembl	74_37	+1	known	silent	c.576	p.N192	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt	-	no_errors	FPR3	HGNC	ENSG00000187474				125	0	0	69	50	42.0168
ZNF615	0	genome.wustl.edu	37	19	52497070	52497070	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	52497070	52497070	C	T	SNP	ZNF615	ENST00000594083	human	ensembl	74_37	-1	known	missense	c.1292	p.R431Q	0.999	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF615	HGNC	ENSG00000197619				60	0	0	30	19	38.7755
ZNF432	0	genome.wustl.edu	37	19	52537843	52537843	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	52537843	52537843	A	G	SNP	ZNF432	ENST00000221315	human	ensembl	74_37	-1	known	silent	c.1089	p.H363	0.964	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF432	HGNC	ENSG00000256087				115	0	0	50	30	37.5
ZNF331	0	genome.wustl.edu	37	19	54080407	54080407	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	54080407	54080407	G	T	SNP	ZNF331	ENST00000253144	human	ensembl	74_37	+1	known	missense	c.593	p.W198L	0.004	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF331	HGNC	ENSG00000130844				88	0	0	31	27	46.5517
NLRP9	0	genome.wustl.edu	37	19	56228095	56228095	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	56228095	56228095	T	C	SNP	NLRP9	ENST00000332836	human	ensembl	74_37	-1	known	missense	c.2329	p.M777V	0.002	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792				87	0	0	39	33	45.8333
ZNF835	0	genome.wustl.edu	37	19	57176318	57176318	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	57176318	57176318	G	A	SNP	ZNF835	ENST00000537055	human	ensembl	74_37	-1	known	silent	c.249	p.C83	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF835	HGNC	ENSG00000127903				41	0	0	27	35	56.4516
PEG3	0	genome.wustl.edu	37	19	57325147	57325147	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	57325147	57325147	C	T	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	missense	c.4663	p.G1555S	0.002	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300				87	0	0	35	26	42.623
RFX2	0	genome.wustl.edu	37	19	6040096	6040096	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	6040096	6040096	G	A	SNP	RFX2	ENST00000303657	human	ensembl	74_37	-1	known	silent	c.417	p.V139	0.997	pfam_RFX1_trans_act	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX2	HGNC	ENSG00000087903				38	0	0	41	34	45.3333
FBN3	0	genome.wustl.edu	37	19	8201136	8201136	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	8201136	8201136	C	T	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	missense	c.1403	p.G468D	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449				86	0	0	68	53	43.8017
ELANE	0	genome.wustl.edu	37	19	853026	853026	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	853026	853026	C	T	SNP	ELANE	ENST00000263621	human	ensembl	74_37	+1	known	missense	c.218	p.A73V	0.041	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	ELANE	HGNC	ENSG00000197561				12	0	0	1	2	66.6667
PRAM1	0	genome.wustl.edu	37	19	8563446	8563446	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	8563446	8563446	G	A	SNP	PRAM1	ENST00000423345	human	ensembl	74_37	-1	known	missense	c.1246	p.P416S	0.000	NULL	superfamily_SH3_domain	-	no_errors	PRAM1	HGNC	ENSG00000133246				25	0	0	18	10	35.7143
MYO1F	0	genome.wustl.edu	37	19	8601234	8601234	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	8601234	8601234	C	T	SNP	MYO1F	ENST00000338257	human	ensembl	74_37	-1	known	missense	c.1945	p.E649K	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain	-	no_errors	MYO1F	HGNC	ENSG00000142347				62	0	0	63	42	40
MUC16	0	genome.wustl.edu	37	19	9061788	9061788	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	9061788	9061788	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.25658	p.P8553H	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				53	0	0	22	9	29.0323
ZNF317	0	genome.wustl.edu	37	19	9267982	9267982	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	9267982	9267982	C	T	SNP	ZNF317	ENST00000247956	human	ensembl	74_37	+1	known	silent	c.201	p.T67	0.688	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF317	HGNC	ENSG00000130803				53	0	0	18	14	43.75
ARID3A	0	genome.wustl.edu	37	19	971946	971946	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	971946	971946	G	A	SNP	ARID3A	ENST00000263620	human	ensembl	74_37	+1	known	missense	c.1663	p.G555S	0.000	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3A	HGNC	ENSG00000116017				41	0	0	27	18	40
ARID3A	0	genome.wustl.edu	37	19	971952	971952	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	971952	971952	A	G	SNP	ARID3A	ENST00000263620	human	ensembl	74_37	+1	known	missense	c.1669	p.S557G	0.000	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3A	HGNC	ENSG00000116017				35	0	0	27	14	34.1463
SLC9A4	0	genome.wustl.edu	37	2	103124628	103124628	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	103124628	103124628	G	A	SNP	SLC9A4	ENST00000295269	human	ensembl	74_37	+1	known	missense	c.1289	p.R430Q	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251				76	0	0	31	25	44.6429
NCK2	0	genome.wustl.edu	37	2	106498349	106498349	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	106498349	106498349	G	A	SNP	NCK2	ENST00000233154	human	ensembl	74_37	+1	known	silent	c.792	p.A264	0.070	superfamily_SH3_domain,pirsf_Cytoplasmic_NCK	pfam_SH3_domain,pfam_SH3_2,pfam_SH2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pirsf_Cytoplasmic_NCK,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	NCK2	HGNC	ENSG00000071051				43	0	0	73	15	17.0455
ST6GAL2	0	genome.wustl.edu	37	2	107423211	107423211	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	107423211	107423211	G	A	SNP	ST6GAL2	ENST00000361686	human	ensembl	74_37	-1	known	missense	c.1513	p.R505C	0.726	NULL	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	-	no_errors	ST6GAL2	HGNC	ENSG00000144057				63	0	0	44	56	56
RGPD4	0	genome.wustl.edu	37	2	108487646	108487646	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	108487646	108487646	A	G	SNP	RGPD4	ENST00000354986	human	ensembl	74_37	+1	known	silent	c.3186	p.S1062	0.983	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862				495	0	0	263	139	34.5771
FOXD4L1	0	genome.wustl.edu	37	2	114257147	114257147	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	114257147	114257147	C	T	SNP	FOXD4L1	ENST00000306507	human	ensembl	74_37	+1	known	missense	c.314	p.P105L	0.886	smart_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD4L1	HGNC	ENSG00000184492				114	0	0	91	102	52.8497
NCKAP5	0	genome.wustl.edu	37	2	133540153	133540153	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	133540153	133540153	G	A	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	missense	c.4231	p.R1411C	0.000	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771				44	0	0	35	32	47.7612
TMEM163	0	genome.wustl.edu	37	2	135215710	135215710	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	135215710	135215710	G	T	SNP	TMEM163	ENST00000281924	human	ensembl	74_37	-1	known	missense	c.702	p.F234L	1.000	NULL	NULL	-	no_errors	TMEM163	HGNC	ENSG00000152128				59	0	0	53	33	38.3721
THSD7B	0	genome.wustl.edu	37	2	138000026	138000026	+	Splice_Site	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	138000026	138000026	G	T	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	splice_site	c.2151-1	e9-1	1.000	-	-	-	no_errors	THSD7B	HGNC	ENSG00000144229				38	0	0	17	7	29.1667
TPO	0	genome.wustl.edu	37	2	1491735	1491735	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	1491735	1491735	G	A	SNP	TPO	ENST00000329066	human	ensembl	74_37	+1	known	silent	c.1740	p.L580	1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_EGF-like_Ca-bd_dom,superfamily_Haem_peroxidase,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	TPO	HGNC	ENSG00000115705				89	0	0	40	29	42.029
NEB	0	genome.wustl.edu	37	2	152581448	152581448	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	152581448	152581448	C	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.430	p.A144S	1.000	pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				43	0	0	19	12	38.7097
ACVR1C	0	genome.wustl.edu	37	2	158390496	158390496	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	158390496	158390496	G	A	SNP	ACVR1C	ENST00000243349	human	ensembl	74_37	-1	known	silent	c.1416	p.R472	0.991	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ACVR1C	HGNC	ENSG00000123612				61	0	0	54	36	40
CSRNP3	0	genome.wustl.edu	37	2	166535568	166535568	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	166535568	166535568	G	A	SNP	CSRNP3	ENST00000314499	human	ensembl	74_37	+1	known	missense	c.1063	p.G355R	0.999	NULL	prints_Cys/Ser-rich_nuc_prot	-	no_errors	CSRNP3	HGNC	ENSG00000178662				74	0	0	62	34	35.4167
PMS1	0	genome.wustl.edu	37	2	190718672	190718672	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	190718672	190718672	G	A	SNP	PMS1	ENST00000441310	human	ensembl	74_37	+1	known	missense	c.830	p.R277Q	1.000	pfam_DNA_mismatch_repair_C,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_DNA_mismatch_repair_N	pfam_DNA_mismatch_repair_C,pfam_HMG_box_dom,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS1	HGNC	ENSG00000064933				38	0	0	23	16	41.0256
ANKRD44	0	genome.wustl.edu	37	2	197986076	197986076	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	197986076	197986076	C	A	SNP	ANKRD44	ENST00000328737	human	ensembl	74_37	-1	known	missense	c.811	p.G271W	1.000	pfam_Ankyrin_rpt,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD44	HGNC	ENSG00000065413				61	0	0	32	14	30.4348
KCTD18	0	genome.wustl.edu	37	2	201362476	201362476	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	201362476	201362476	C	A	SNP	KCTD18	ENST00000359878	human	ensembl	74_37	-1	known	missense	c.661	p.G221C	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold	-	no_errors	KCTD18	HGNC	ENSG00000155729				112	0	0	46	38	45.2381
CYP20A1	0	genome.wustl.edu	37	2	204150338	204150338	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	204150338	204150338	G	A	SNP	CYP20A1	ENST00000356079	human	ensembl	74_37	+1	known	missense	c.854	p.C285Y	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP20A1	HGNC	ENSG00000119004				53	0	0	35	10	22.2222
PUM2	0	genome.wustl.edu	37	2	20463159	20463159	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	20463159	20463159	G	A	SNP	PUM2	ENST00000361078	human	ensembl	74_37	-1	known	nonsense	c.2020	p.R674*	1.000	NULL	pfam_Pumilio_RNA-bd_rpt,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	PUM2	HGNC	ENSG00000055917				61	0	0	32	27	45.7627
PUM2	0	genome.wustl.edu	37	2	20494174	20494174	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	20494174	20494174	T	C	SNP	PUM2	ENST00000361078	human	ensembl	74_37	-1	known	missense	c.1115	p.Q372R	1.000	NULL	pfam_Pumilio_RNA-bd_rpt,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	PUM2	HGNC	ENSG00000055917				101	0	0	83	40	32.5203
PARD3B	0	genome.wustl.edu	37	2	205969158	205969158	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	205969158	205969158	G	A	SNP	PARD3B	ENST00000406610	human	ensembl	74_37	+1	known	silent	c.513	p.T171	0.056	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3B	HGNC	ENSG00000116117				79	0	0	33	32	49.2308
PARD3B	0	genome.wustl.edu	37	2	206364664	206364664	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	206364664	206364664	G	A	SNP	PARD3B	ENST00000406610	human	ensembl	74_37	+1	known	missense	c.3089	p.R1030Q	1.000	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3B	HGNC	ENSG00000116117				130	0	0	72	42	36.8421
FN1	0	genome.wustl.edu	37	2	216232726	216232726	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	216232726	216232726	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.6878	p.T2293M	0.020	NULL	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				55	0	0	29	28	49.1228
FN1	0	genome.wustl.edu	37	2	216240005	216240005	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	216240005	216240005	T	G	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.6089	p.K2030T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				80	0	0	43	22	33.8462
ZNF142	0	genome.wustl.edu	37	2	219507531	219507531	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	219507531	219507531	C	T	SNP	ZNF142	ENST00000411696	human	ensembl	74_37	-1	known	silent	c.3708	p.T1236	0.764	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568				126	0	0	138	16	10.3896
FAM124B	0	genome.wustl.edu	37	2	225266089	225266089	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	225266089	225266089	A	C	SNP	FAM124B	ENST00000409685	human	ensembl	74_37	-1	known	missense	c.397	p.C133G	0.153	NULL	NULL	-	no_errors	FAM124B	HGNC	ENSG00000124019				40	0	0	26	24	48
NMUR1	0	genome.wustl.edu	37	2	232393149	232393149	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	232393149	232393149	G	A	SNP	NMUR1	ENST00000305141	human	ensembl	74_37	-1	known	missense	c.583	p.P195S	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NeuromedU_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NeuromedU_rcpt_1,prints_NeuromedU_rcpt,prints_GPCR_Rhodpsn	-	no_errors	NMUR1	HGNC	ENSG00000171596				29	0	0	26	16	38.0952
ALPP	0	genome.wustl.edu	37	2	233246214	233246214	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	233246214	233246214	C	T	SNP	ALPP	ENST00000392027	human	ensembl	74_37	+1	known	silent	c.1317	p.P439	0.372	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPP	HGNC	ENSG00000163283				23	0	0	18	14	43.75
AGAP1	0	genome.wustl.edu	37	2	236877175	236877175	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	236877175	236877175	C	T	SNP	AGAP1	ENST00000304032	human	ensembl	74_37	+1	known	missense	c.1553	p.P518L	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP1	HGNC	ENSG00000157985				48	0	0	49	31	38.75
COL6A3	0	genome.wustl.edu	37	2	238283516	238283516	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	238283516	238283516	C	T	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.3218	p.S1073N	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				64	0	0	62	29	31.8681
COL6A3	0	genome.wustl.edu	37	2	238296516	238296516	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	238296516	238296516	G	A	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.1021	p.R341C	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				27	0	0	24	13	35.1351
HDAC4	0	genome.wustl.edu	37	2	240002800	240002800	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	240002800	240002800	G	A	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	missense	c.2726	p.A909V	0.955	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024				16	0	0	28	11	28.2051
PASK	0	genome.wustl.edu	37	2	242065963	242065963	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	242065963	242065963	C	T	SNP	PASK	ENST00000358649	human	ensembl	74_37	-1	known	silent	c.2367	p.S789	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PAS_fold,superfamily_Kinase-like_dom,superfamily_PAS,smart_PAS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_PAS,pfscan_Prot_kinase_dom,tigrfam_PAS	-	no_errors	PASK	HGNC	ENSG00000115687				72	0	0	29	21	42
DRC1	0	genome.wustl.edu	37	2	26667583	26667583	+	Splice_Site	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	26667583	26667583	G	T	SNP	DRC1	ENST00000288710	human	ensembl	74_37	+1	known	splice_site	c.1164-1	e10-1	1.000	-	-	-	no_errors	DRC1	HGNC	ENSG00000157856				20	0	0	6	9	60
PREB	0	genome.wustl.edu	37	2	27356049	27356049	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	27356049	27356049	C	T	SNP	PREB	ENST00000260643	human	ensembl	74_37	-1	known	missense	c.482	p.C161Y	1.000	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	PREB	HGNC	ENSG00000138073				237	0	0	113	80	41.4508
WDR43	0	genome.wustl.edu	37	2	29136984	29136984	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	29136984	29136984	T	C	SNP	WDR43	ENST00000407426	human	ensembl	74_37	+1	known	missense	c.656	p.I219T	0.445	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_SSU_processome_Utp12,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR43	HGNC	ENSG00000163811				50	0	0	20	14	41.1765
EHD3	0	genome.wustl.edu	37	2	31483572	31483572	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	31483572	31483572	C	T	SNP	EHD3	ENST00000322054	human	ensembl	74_37	+1	known	silent	c.699	p.Y233	0.987	superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD3	HGNC	ENSG00000013016				49	0	0	44	27	38.0282
LTBP1	0	genome.wustl.edu	37	2	33589400	33589400	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	33589400	33589400	G	A	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	missense	c.4520	p.C1507Y	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323				61	0	0	22	21	48.8372
TRAPPC12	0	genome.wustl.edu	37	2	3469465	3469465	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	3469465	3469465	A	G	SNP	TRAPPC12	ENST00000324266	human	ensembl	74_37	+1	known	missense	c.1775	p.Q592R	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TRAPPC12	HGNC	ENSG00000171853				53	0	0	45	32	41.5584
PRKCE	0	genome.wustl.edu	37	2	46234741	46234741	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	46234741	46234741	C	T	SNP	PRKCE	ENST00000306156	human	ensembl	74_37	+1	known	missense	c.1204	p.R402C	1.000	superfamily_Kinase-like_dom,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCE	HGNC	ENSG00000171132				49	0	0	25	35	58.3333
SPTBN1	0	genome.wustl.edu	37	2	54856759	54856759	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	54856759	54856759	C	T	SNP	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	missense	c.2488	p.R830W	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306				48	0	0	51	33	39.2857
AHSA2	0	genome.wustl.edu	37	2	61413678	61413678	+	RNA	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	61413678	61413678	T	C	SNP	AHSA2	ENST00000491217	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	AHSA2	HGNC	ENSG00000173209				48	0	0	24	14	36.8421
ENSG00000229839	0	genome.wustl.edu	37	2	62373950	62373950	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	62373950	62373950	C	T	SNP	ENSG00000229839	ENST00000421323	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC018462.2	Clone_based_vega_gene	ENSG00000229839				54	0	0	37	16	30.1887
TET3	0	genome.wustl.edu	37	2	74326560	74326560	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	74326560	74326560	T	C	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	missense	c.3020	p.L1007P	1.000	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605				32	0	0	23	19	45.2381
REG3G	0	genome.wustl.edu	37	2	79255050	79255050	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	79255050	79255050	A	G	SNP	REG3G	ENST00000272324	human	ensembl	74_37	+1	known	missense	c.451	p.R151G	0.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG3G	HGNC	ENSG00000143954				86	0	0	50	29	36.7089
SPTLC3	0	genome.wustl.edu	37	20	13071817	13071817	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	13071817	13071817	G	A	SNP	SPTLC3	ENST00000399002	human	ensembl	74_37	+1	known	missense	c.694	p.A232T	1.000	pfam_Aminotransferase_I/II,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	SPTLC3	HGNC	ENSG00000172296				90	0	0	40	28	41.1765
TGM3	0	genome.wustl.edu	37	20	2298001	2298001	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	2298001	2298001	C	T	SNP	TGM3	ENST00000381458	human	ensembl	74_37	+1	known	missense	c.853	p.R285W	0.956	pfam_Transglutaminase-like,smart_Transglutaminase-like	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM3	HGNC	ENSG00000125780				88	0	0	69	47	40.5172
PTPRA	0	genome.wustl.edu	37	20	3007386	3007386	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	3007386	3007386	A	G	SNP	PTPRA	ENST00000425918	human	ensembl	74_37	+1	known	silent	c.1701	p.P567	0.850	pirsf_Tyr_Pase_rcpt_a/e-type,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRA	HGNC	ENSG00000132670				49	0	0	19	12	38.7097
PROCR	0	genome.wustl.edu	37	20	33764529	33764529	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	33764529	33764529	G	A	SNP	PROCR	ENST00000216968	human	ensembl	74_37	+1	known	silent	c.630	p.S210	0.650	NULL	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	-	no_errors	PROCR	HGNC	ENSG00000101000				21	0	0	12	8	40
DLGAP4	0	genome.wustl.edu	37	20	35060934	35060934	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	35060934	35060934	G	A	SNP	DLGAP4	ENST00000339266	human	ensembl	74_37	+1	known	missense	c.814	p.A272T	0.134	NULL	pfam_GKAP	-	no_errors	DLGAP4	HGNC	ENSG00000080845				15	0	0	17	17	50
SAMHD1	0	genome.wustl.edu	37	20	35521451	35521451	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	35521451	35521451	G	T	SNP	SAMHD1	ENST00000262878	human	ensembl	74_37	-1	known	missense	c.1765	p.P589T	0.489	NULL	pfam_HD_domain,pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,smart_HD/PDEase_dom,pfscan_SAM	-	no_errors	SAMHD1	HGNC	ENSG00000101347				81	0	0	45	14	23.7288
SIGLEC1	0	genome.wustl.edu	37	20	3675129	3675129	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	3675129	3675129	G	A	SNP	SIGLEC1	ENST00000344754	human	ensembl	74_37	-1	known	nonsense	c.2995	p.R999*	0.230	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC1	HGNC	ENSG00000088827				24	0	0	18	3	14.2857
SLC32A1	0	genome.wustl.edu	37	20	37357202	37357202	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	37357202	37357202	G	A	SNP	SLC32A1	ENST00000217420	human	ensembl	74_37	+1	known	missense	c.1498	p.G500S	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC32A1	HGNC	ENSG00000101438				15	0	0	22	16	42.1053
PLCG1	0	genome.wustl.edu	37	20	39801287	39801287	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	39801287	39801287	T	C	SNP	PLCG1	ENST00000244007	human	ensembl	74_37	+1	known	splice_site	c.3130+2	e26+2	1.000	-	-	-	no_errors	PLCG1	HGNC	ENSG00000124181				32	0	0	18	18	50
PTPRT	0	genome.wustl.edu	37	20	41419958	41419958	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	41419958	41419958	G	A	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	silent	c.363	p.N121	0.995	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				59	0	0	65	34	34.3434
MMP9	0	genome.wustl.edu	37	20	44641175	44641175	+	Silent	SNP	G	G	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	44641175	44641175	G	C	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	silent	c.1284	p.G428	0.271	pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985				62	0	0	60	31	34.0659
ZNFX1	0	genome.wustl.edu	37	20	47864574	47864574	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	47864574	47864574	G	A	SNP	ZNFX1	ENST00000371752	human	ensembl	74_37	-1	known	missense	c.4987	p.R1663W	0.000	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_Znf_NFX1	-	no_errors	ZNFX1	HGNC	ENSG00000124201				96	0	0	59	43	42.1569
B4GALT5	0	genome.wustl.edu	37	20	48252915	48252915	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	48252915	48252915	G	A	SNP	B4GALT5	ENST00000371711	human	ensembl	74_37	-1	known	silent	c.1101	p.Y367	0.002	pfam_Galactosyl_T_C	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT5	HGNC	ENSG00000158470				82	0	0	37	30	44.7761
SALL4	0	genome.wustl.edu	37	20	50408073	50408073	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	50408073	50408073	G	A	SNP	SALL4	ENST00000217086	human	ensembl	74_37	-1	known	missense	c.949	p.P317S	0.999	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL4	HGNC	ENSG00000101115				47	0	0	36	24	40
LAMA5	0	genome.wustl.edu	37	20	60886294	60886294	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	60886294	60886294	G	A	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	nonsense	c.10012	p.R3338*	0.000	NULL	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				22	0	0	22	17	43.5897
DOPEY2	0	genome.wustl.edu	37	21	37581040	37581040	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	37581040	37581040	G	A	SNP	DOPEY2	ENST00000399151	human	ensembl	74_37	+1	known	silent	c.519	p.S173	0.156	pfam_Dopey_N	pfam_Dopey_N	-	no_errors	DOPEY2	HGNC	ENSG00000142197				46	0	0	37	20	35.0877
DOPEY2	0	genome.wustl.edu	37	21	37605196	37605196	+	Silent	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	37605196	37605196	C	A	SNP	DOPEY2	ENST00000399151	human	ensembl	74_37	+1	known	silent	c.2445	p.S815	1.000	NULL	pfam_Dopey_N	-	no_errors	DOPEY2	HGNC	ENSG00000142197				90	0	0	52	41	44.086
HLCS	0	genome.wustl.edu	37	21	38309376	38309376	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	38309376	38309376	C	T	SNP	HLCS	ENST00000336648	human	ensembl	74_37	-1	known	silent	c.369	p.A123	0.035	NULL	pfam_BPL_LipA_LipB,pfam_BPL_C,tigrfam_Biotin_CoA_COase_ligase	-	no_errors	HLCS	HGNC	ENSG00000159267				58	0	0	26	19	42.2222
KRTAP10-10	0	genome.wustl.edu	37	21	46057624	46057624	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	46057624	46057624	C	A	SNP	KRTAP10-10	ENST00000380095	human	ensembl	74_37	+1	known	missense	c.290	p.P97H	0.047	NULL	NULL	-	no_errors	KRTAP10-10	HGNC	ENSG00000221859				181	0	0	96	75	43.8596
SUMO3	0	genome.wustl.edu	37	21	46226885	46226885	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	46226885	46226885	A	G	SNP	SUMO3	ENST00000411651	human	ensembl	74_37	-1	known	missense	c.407	p.L136P	0.000	NULL	pfam_Rad60/SUMO_like,pfscan_Ubiquitin_supergroup	-	no_errors	SUMO3	HGNC	ENSG00000184900				43	0	0	29	16	35.5556
FTCD	0	genome.wustl.edu	37	21	47571482	47571482	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	47571482	47571482	C	A	SNP	FTCD	ENST00000359679	human	ensembl	74_37	-1	known	missense	c.626	p.G209V	0.995	pfam_Formiminotransferase_C,superfamily_FormiminoTrfase_N/C_subdom,tigrfam_Formiminotransferase_cat	pfam_Formiminotransferase_N,pfam_Formiminotransferase_C,pfam_Cyclodeamin/CycHdrlase,superfamily_FormiminoTrfase_N/C_subdom,superfamily_Cyclodeamin/CycHdrlase,tigrfam_Formiminotransferase_cat	-	no_errors	FTCD	HGNC	ENSG00000160282				61	0	0	46	38	45.2381
DIP2A	0	genome.wustl.edu	37	21	47952045	47952045	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	47952045	47952045	G	A	SNP	DIP2A	ENST00000318711	human	ensembl	74_37	+1	known	silent	c.1203	p.A401	0.815	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2A	HGNC	ENSG00000160305				30	0	0	17	11	39.2857
IL17RA	0	genome.wustl.edu	37	22	17589282	17589282	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	17589282	17589282	C	T	SNP	IL17RA	ENST00000319363	human	ensembl	74_37	+1	known	silent	c.1173	p.Y391	0.846	pfam_SEFIR	pfam_SEFIR	-	no_errors	IL17RA	HGNC	ENSG00000177663				52	0	0	33	19	36.5385
CECR1	0	genome.wustl.edu	37	22	17662900	17662900	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	17662900	17662900	C	G	SNP	CECR1	ENST00000262607	human	ensembl	74_37	-1	known	missense	c.1252	p.V418L	1.000	pfam_A/AMP_deaminase_dom,tigrfam_Ad_deam-like	pfam_A/AMP_deaminase_dom,pfam_A_deaminase_N,tigrfam_Ad_deam-like	-	no_errors	CECR1	HGNC	ENSG00000093072				46	0	0	28	16	36.3636
CLTCL1	0	genome.wustl.edu	37	22	19175080	19175080	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	19175080	19175080	T	C	SNP	CLTCL1	ENST00000263200	human	ensembl	74_37	-1	known	missense	c.4595	p.H1532R	0.302	pfam_Clathrin_H-chain/VPS_repeat,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTCL1	HGNC	ENSG00000070371				61	0	0	27	30	52.6316
ZDHHC8	0	genome.wustl.edu	37	22	20131091	20131091	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	20131091	20131091	G	A	SNP	ZDHHC8	ENST00000405930	human	ensembl	74_37	+1	known	silent	c.1938	p.L646	0.945	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC8	HGNC	ENSG00000099904				16	0	0	6	16	72.7273
GNAZ	0	genome.wustl.edu	37	22	23438292	23438292	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	23438292	23438292	C	T	SNP	GNAZ	ENST00000248996	human	ensembl	74_37	+1	known	missense	c.410	p.A137V	0.998	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAZ	HGNC	ENSG00000128266				62	0	0	57	32	35.9551
CABIN1	0	genome.wustl.edu	37	22	24562756	24562756	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	24562756	24562756	C	T	SNP	CABIN1	ENST00000263119	human	ensembl	74_37	+1	known	silent	c.5157	p.P1719	0.001	NULL	pfam_MEF2_binding,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CABIN1	HGNC	ENSG00000099991				101	1	0.980392	55	45	45
SEC14L4	0	genome.wustl.edu	37	22	30891933	30891933	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	30891933	30891933	G	A	SNP	SEC14L4	ENST00000540456	human	ensembl	74_37	-1	known	missense	c.62	p.P21L	0.001	NULL	pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD	-	no_errors	SEC14L4	HGNC	ENSG00000133488				32	0	0	20	9	31.0345
SMTN	0	genome.wustl.edu	37	22	31491333	31491333	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	31491333	31491333	G	A	SNP	SMTN	ENST00000347557	human	ensembl	74_37	+1	known	silent	c.1677	p.A559	0.000	NULL	pfam_Smoothelin,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTN	HGNC	ENSG00000183963				44	0	0	32	28	46.6667
MYH9	0	genome.wustl.edu	37	22	36698705	36698705	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	36698705	36698705	T	C	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	missense	c.2408	p.Q803R	1.000	superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345				49	0	0	52	40	43.4783
IFT27	0	genome.wustl.edu	37	22	37171798	37171798	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	37171798	37171798	G	A	SNP	IFT27	ENST00000476548	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	IFT27	HGNC	ENSG00000100360				33	0	0	27	17	38.6364
GGA1	0	genome.wustl.edu	37	22	38021822	38021822	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	38021822	38021822	T	C	SNP	GGA1	ENST00000343632	human	ensembl	74_37	+1	known	missense	c.959	p.L320P	1.000	NULL	pfam_VHS,pfam_GAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_Coatomer/clathrin_app_Ig-like,superfamily_ENTH_VHS,smart_VHS_subgr,smart_Clathrin_a/b/g-adaptin_app_Ig,pfscan_Clathrin_g-adaptin_app,pfscan_GAT,pfscan_VHS	-	no_errors	GGA1	HGNC	ENSG00000100083				45	0	0	41	29	41.4286
PICK1	0	genome.wustl.edu	37	22	38470380	38470380	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	38470380	38470380	C	T	SNP	PICK1	ENST00000356976	human	ensembl	74_37	+1	known	missense	c.901	p.R301C	1.000	pfam_AH_dom,pfam_BAR_dom,pfscan_AH_dom	pfam_AH_dom,pfam_PDZ,pfam_BAR_dom,superfamily_PDZ,smart_PDZ,pfscan_AH_dom,pfscan_PDZ	-	no_errors	PICK1	HGNC	ENSG00000100151				43	0	0	30	11	26.8293
DNAL4	0	genome.wustl.edu	37	22	39175613	39175613	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	39175613	39175613	G	A	SNP	DNAL4	ENST00000216068	human	ensembl	74_37	-1	known	silent	c.159	p.A53	0.801	pfam_Dynein_light_chain_typ-1/2	pfam_Dynein_light_chain_typ-1/2	-	no_errors	DNAL4	HGNC	ENSG00000100246				11	0	0	9	3	25
RANGAP1	0	genome.wustl.edu	37	22	41653969	41653969	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	41653969	41653969	C	T	SNP	RANGAP1	ENST00000356244	human	ensembl	74_37	-1	known	missense	c.757	p.A253T	0.629	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_Ran_GTPase_activating_1_C,superfamily_Ran_GTPase_activating_1_C,smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	RANGAP1	HGNC	ENSG00000100401				49	0	0	49	3	5.76923
RRP7B	0	genome.wustl.edu	37	22	42970690	42970690	+	RNA	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	42970690	42970690	T	C	SNP	RRP7B	ENST00000357802	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RRP7B	HGNC	ENSG00000182841				13	0	0	5	6	54.5455
POLDIP3	0	genome.wustl.edu	37	22	43010846	43010846	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	43010846	43010846	C	T	SNP	POLDIP3	ENST00000252115	human	ensembl	74_37	-1	known	silent	c.18	p.L6	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	POLDIP3	HGNC	ENSG00000100227				39	0	0	51	22	30.137
SCUBE1	0	genome.wustl.edu	37	22	43735179	43735179	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	43735179	43735179	G	A	SNP	SCUBE1	ENST00000360835	human	ensembl	74_37	-1	known	nonsense	c.151	p.Q51*	1.000	pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE1	HGNC	ENSG00000159307				54	0	0	38	34	47.2222
CELSR1	0	genome.wustl.edu	37	22	46860057	46860057	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	46860057	46860057	C	T	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.3730	p.V1244I	1.000	NULL	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				47	0	0	40	41	50.6173
TBC1D22A	0	genome.wustl.edu	37	22	47274558	47274558	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	47274558	47274558	G	A	SNP	TBC1D22A	ENST00000337137	human	ensembl	74_37	+1	known	missense	c.647	p.R216Q	0.382	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D22A	HGNC	ENSG00000054611				74	0	0	55	27	32.9268
TUBGCP6	0	genome.wustl.edu	37	22	50658779	50658779	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	50658779	50658779	C	T	SNP	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	missense	c.4009	p.G1337R	0.000	pfam_TUBGCP	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159				37	0	0	19	11	36.6667
SBF1	0	genome.wustl.edu	37	22	50901738	50901738	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	50901738	50901738	C	T	SNP	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	missense	c.1873	p.V625I	0.998	pfam_SBF2	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241				21	0	0	13	5	27.7778
MYH15	0	genome.wustl.edu	37	3	108220694	108220694	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	108220694	108220694	G	A	SNP	MYH15	ENST00000273353	human	ensembl	74_37	-1	known	silent	c.264	p.S88	0.077	pfam_Myosin_N,superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821				102	0	0	104	39	27.2727
ABHD10	0	genome.wustl.edu	37	3	111700631	111700631	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	111700631	111700631	C	A	SNP	ABHD10	ENST00000273359	human	ensembl	74_37	+1	known	missense	c.143	p.A48D	0.998	NULL	pfam_AB_hydrolase_1,pfam_Peptidase_S9	-	no_errors	ABHD10	HGNC	ENSG00000144827				56	0	0	52	22	29.7297
CCDC80	0	genome.wustl.edu	37	3	112357944	112357944	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	112357944	112357944	T	A	SNP	CCDC80	ENST00000206423	human	ensembl	74_37	-1	known	missense	c.809	p.E270V	1.000	NULL	NULL	-	no_errors	CCDC80	HGNC	ENSG00000091986				102	0	0	137	20	12.7389
SIDT1	0	genome.wustl.edu	37	3	113320472	113320472	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	113320472	113320472	C	T	SNP	SIDT1	ENST00000393830	human	ensembl	74_37	+1	known	silent	c.1083	p.A361	1.000	NULL	NULL	-	no_errors	SIDT1	HGNC	ENSG00000072858				35	0	0	33	13	28.2609
SIDT1	0	genome.wustl.edu	37	3	113329946	113329946	+	Silent	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	113329946	113329946	C	A	SNP	SIDT1	ENST00000393830	human	ensembl	74_37	+1	known	silent	c.1812	p.A604	1.000	NULL	NULL	-	no_errors	SIDT1	HGNC	ENSG00000072858				109	0	0	108	34	23.9437
KIAA2018	0	genome.wustl.edu	37	3	113375167	113375167	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	113375167	113375167	G	T	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	missense	c.5362	p.R1788S	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542				189	0	0	128	59	31.5508
ZDHHC23	0	genome.wustl.edu	37	3	113679589	113679589	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	113679589	113679589	C	T	SNP	ZDHHC23	ENST00000488129	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	ZDHHC23	HGNC	ENSG00000184307				35	0	0	45	24	34.7826
PDIA5	0	genome.wustl.edu	37	3	122808030	122808030	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	122808030	122808030	T	C	SNP	PDIA5	ENST00000316218	human	ensembl	74_37	+1	known	missense	c.58	p.W20R	0.562	NULL	pfam_Thioredoxin_domain,pfam_AhpC/TSA,superfamily_Thioredoxin-like_fold,prints_Thioredoxin	-	no_errors	PDIA5	HGNC	ENSG00000065485				76	0	0	54	25	31.6456
ADCY5	0	genome.wustl.edu	37	3	123022987	123022987	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	123022987	123022987	C	T	SNP	ADCY5	ENST00000462833	human	ensembl	74_37	-1	known	missense	c.2486	p.R829Q	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY5	HGNC	ENSG00000173175				33	0	0	40	11	21.5686
MYLK	0	genome.wustl.edu	37	3	123383021	123383021	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	123383021	123383021	C	T	SNP	MYLK	ENST00000360304	human	ensembl	74_37	-1	known	missense	c.3916	p.G1306S	0.998	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	MYLK	HGNC	ENSG00000065534				176	0	0	332	124	27.193
KALRN	0	genome.wustl.edu	37	3	124103833	124103833	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	124103833	124103833	C	T	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.1906	p.R636W	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145				60	0	0	71	27	27.551
MCM2	0	genome.wustl.edu	37	3	127339709	127339709	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	127339709	127339709	C	T	SNP	MCM2	ENST00000265056	human	ensembl	74_37	+1	known	missense	c.2434	p.R812C	1.000	superfamily_P-loop_NTPase	pfam_MCM_DNA-dep_ATPase,pfam_MCM2,pfam_Mg_chelatse_chII,pfam_ATPase_AAA-3,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM2,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM2	HGNC	ENSG00000073111				105	0	0	203	21	9.375
KBTBD12	0	genome.wustl.edu	37	3	127642066	127642066	+	Silent	SNP	T	T	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	127642066	127642066	T	A	SNP	KBTBD12	ENST00000405109	human	ensembl	74_37	+1	known	silent	c.162	p.P54	0.961	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD12	HGNC	ENSG00000187715				49	0	0	22	11	33.3333
DNAJC13	0	genome.wustl.edu	37	3	132193882	132193882	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	132193882	132193882	G	A	SNP	DNAJC13	ENST00000260818	human	ensembl	74_37	+1	known	missense	c.2398	p.E800K	1.000	superfamily_ARM-type_fold	pfam_DnaJ_domain,superfamily_ARM-type_fold,superfamily_GYF,smart_DnaJ_domain,pfscan_DnaJ_domain	-	no_errors	DNAJC13	HGNC	ENSG00000138246				93	0	0	78	19	19.5876
NUP210	0	genome.wustl.edu	37	3	13461671	13461671	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	13461671	13461671	G	A	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	missense	c.56	p.A19V	0.857	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182				16	0	0	19	12	38.7097
DZIP1L	0	genome.wustl.edu	37	3	137822381	137822381	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	137822381	137822381	G	A	SNP	DZIP1L	ENST00000327532	human	ensembl	74_37	-1	known	missense	c.433	p.R145W	0.960	NULL	pfscan_Znf_C2H2	-	no_errors	DZIP1L	HGNC	ENSG00000158163				22	0	0	30	12	28.5714
DBR1	0	genome.wustl.edu	37	3	137886126	137886126	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	137886126	137886126	A	C	SNP	DBR1	ENST00000260803	human	ensembl	74_37	-1	known	missense	c.511	p.F171V	1.000	pfam_PEstase_dom	pfam_DBR1_C,pfam_PEstase_dom	-	no_errors	DBR1	HGNC	ENSG00000138231				46	0	0	33	17	34
MRAS	0	genome.wustl.edu	37	3	138116242	138116242	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	138116242	138116242	C	T	SNP	MRAS	ENST00000289104	human	ensembl	74_37	+1	known	silent	c.270	p.I90	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_EF_GTP-bd_dom,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_EF_GTP-bd_dom,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	MRAS	HGNC	ENSG00000158186				30	0	0	54	18	25
XRN1	0	genome.wustl.edu	37	3	142142403	142142403	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	142142403	142142403	G	A	SNP	XRN1	ENST00000264951	human	ensembl	74_37	-1	known	missense	c.709	p.R237W	1.000	pirsf_5_3_exoribonuclease_1	pfam_Put_53exo,pirsf_5_3_exoribonuclease_1	-	no_errors	XRN1	HGNC	ENSG00000114127				39	0	0	24	14	36.8421
PAQR9	0	genome.wustl.edu	37	3	142681449	142681449	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	142681449	142681449	T	C	SNP	PAQR9	ENST00000340634	human	ensembl	74_37	-1	known	missense	c.730	p.T244A	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR9	HGNC	ENSG00000188582				59	0	0	106	48	31.1688
SLC6A6	0	genome.wustl.edu	37	3	14489115	14489115	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	14489115	14489115	T	C	SNP	SLC6A6	ENST00000360861	human	ensembl	74_37	+1	known	silent	c.390	p.I130	0.999	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_taurine	-	no_errors	SLC6A6	HGNC	ENSG00000131389				438	0	0	421	178	29.7162
SIAH2	0	genome.wustl.edu	37	3	150480304	150480304	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	150480304	150480304	G	A	SNP	SIAH2	ENST00000312960	human	ensembl	74_37	-1	known	silent	c.333	p.C111	1.000	pfscan_Znf_RING	pfam_7-in-absentia-prot_TRAF-dom,superfamily_TRAF-like,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	SIAH2	HGNC	ENSG00000181788				20	0	0	29	16	35.5556
AADACL2	0	genome.wustl.edu	37	3	151463416	151463416	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	151463416	151463416	G	A	SNP	AADACL2	ENST00000356517	human	ensembl	74_37	+1	known	missense	c.551	p.C184Y	0.010	pfam_AB_hydrolase_3,pfam_CarbesteraseB,pfam_Steryl_acetyl_hydrolase,pirsf_Arylacetamide_deacetylase	pfam_AB_hydrolase_3,pfam_CarbesteraseB,pfam_Steryl_acetyl_hydrolase,pirsf_Arylacetamide_deacetylase	-	no_errors	AADACL2	HGNC	ENSG00000197953				95	0	0	96	34	26.1538
GMPS	0	genome.wustl.edu	37	3	155652794	155652794	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	155652794	155652794	G	A	SNP	GMPS	ENST00000496455	human	ensembl	74_37	+1	known	missense	c.1766	p.R589H	1.000	pfam_GMP_synth_C	pfam_GATASE,pfam_GMP_synth_C,pfam_Peptidase_C26,pfam_NAD/GMP_synthase,pfam_QueC,pfam_Asn_synthase,pfam_tRNA-specific_2-thiouridylase,tigrfam_GMP_synth_N	-	no_errors	GMPS	HGNC	ENSG00000163655				125	0	0	120	34	22.0779
TIPARP	0	genome.wustl.edu	37	3	156413783	156413783	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	156413783	156413783	C	T	SNP	TIPARP	ENST00000295924	human	ensembl	74_37	+1	known	missense	c.1216	p.R406C	1.000	pfscan_WWE-dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	TIPARP	HGNC	ENSG00000163659				69	0	0	69	37	34.9057
SLC2A2	0	genome.wustl.edu	37	3	170725022	170725022	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	170725022	170725022	A	G	SNP	SLC2A2	ENST00000314251	human	ensembl	74_37	-1	known	missense	c.527	p.I176T	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_2,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A2	HGNC	ENSG00000163581				30	0	0	31	9	22.5
ATP11B	0	genome.wustl.edu	37	3	182597414	182597414	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	182597414	182597414	A	G	SNP	ATP11B	ENST00000323116	human	ensembl	74_37	+1	known	missense	c.2383	p.M795V	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11B	HGNC	ENSG00000058063				59	0	0	46	21	31.3433
HTR3D	0	genome.wustl.edu	37	3	183756689	183756689	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	183756689	183756689	G	A	SNP	HTR3D	ENST00000382489	human	ensembl	74_37	+1	known	missense	c.1291	p.A431T	0.393	superfamily_Neurotrans-gated_channel_TM	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd	-	no_errors	HTR3D	HGNC	ENSG00000186090				92	0	0	144	61	29.7561
FAM131A	0	genome.wustl.edu	37	3	184062665	184062665	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	184062665	184062665	G	A	SNP	FAM131A	ENST00000383847	human	ensembl	74_37	+1	known	silent	c.1008	p.T336	0.039	NULL	NULL	-	no_errors	FAM131A	HGNC	ENSG00000175182				43	0	0	46	16	25.8065
KNG1	0	genome.wustl.edu	37	3	186456939	186456939	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	186456939	186456939	T	C	SNP	KNG1	ENST00000265023	human	ensembl	74_37	+1	known	missense	c.982	p.C328R	0.964	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat,prints_Kininogen	-	no_errors	KNG1	HGNC	ENSG00000113889				30	0	0	26	12	31.5789
LRRC15	0	genome.wustl.edu	37	3	194080702	194080702	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	194080702	194080702	G	A	SNP	LRRC15	ENST00000439944	human	ensembl	74_37	-1	known	silent	c.1089	p.D363	0.001	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC15	HGNC	ENSG00000172061				34	0	0	50	20	28.5714
GP5	0	genome.wustl.edu	37	3	194118269	194118269	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	194118269	194118269	G	A	SNP	GP5	ENST00000323007	human	ensembl	74_37	-1	known	missense	c.743	p.T248M	0.001	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	GP5	HGNC	ENSG00000178732				121	0	0	231	82	26.1981
LSG1	0	genome.wustl.edu	37	3	194366916	194366916	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	194366916	194366916	A	G	SNP	LSG1	ENST00000265245	human	ensembl	74_37	-1	known	missense	c.1600	p.Y534H	1.000	NULL	pfam_GTP_binding_domain,superfamily_P-loop_NTPase,prints_GTP_binding_domain	-	no_errors	LSG1	HGNC	ENSG00000041802				120	0	0	121	47	27.9762
FAM43A	0	genome.wustl.edu	37	3	194407806	194407806	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	194407806	194407806	G	A	SNP	FAM43A	ENST00000329759	human	ensembl	74_37	+1	known	missense	c.251	p.R84H	1.000	smart_PTB/PI_dom	smart_PTB/PI_dom	-	no_errors	FAM43A	HGNC	ENSG00000185112				68	0	0	89	22	19.8198
PDCD6IP	0	genome.wustl.edu	37	3	33907950	33907950	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	33907950	33907950	C	T	SNP	PDCD6IP	ENST00000457054	human	ensembl	74_37	+1	known	missense	c.2555	p.P852L	1.000	NULL	pfam_BRO1_dom,pfscan_BRO1_dom	-	no_errors	PDCD6IP	HGNC	ENSG00000170248				95	0	0	76	30	28.3019
DCLK3	0	genome.wustl.edu	37	3	36763063	36763063	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	36763063	36763063	A	G	SNP	DCLK3	ENST00000416516	human	ensembl	74_37	-1	known	missense	c.1540	p.C514R	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK3	HGNC	ENSG00000163673				79	0	0	37	57	60.6383
TRANK1	0	genome.wustl.edu	37	3	36872969	36872969	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	36872969	36872969	C	T	SNP	TRANK1	ENST00000429976	human	ensembl	74_37	-1	known	missense	c.7973	p.R2658Q	0.878	NULL	pfam_UvrD-like_ATP-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom	-	no_errors	TRANK1	HGNC	ENSG00000168016				17	0	0	9	17	65.3846
HHATL	0	genome.wustl.edu	37	3	42735292	42735292	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	42735292	42735292	A	G	SNP	HHATL	ENST00000310417	human	ensembl	74_37	-1	known	silent	c.1065	p.I355	0.264	pfam_MBOAT_fam	pfam_MBOAT_fam	-	no_errors	HHATL	HGNC	ENSG00000010282				43	0	0	37	27	42.1875
PTH1R	0	genome.wustl.edu	37	3	46943283	46943283	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	46943283	46943283	G	A	SNP	PTH1R	ENST00000313049	human	ensembl	74_37	+1	known	missense	c.1144	p.V382I	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_parathyroid_rcpt	-	no_errors	PTH1R	HGNC	ENSG00000160801				50	0	0	44	45	50.5618
ARIH2	0	genome.wustl.edu	37	3	49004695	49004695	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	49004695	49004695	C	T	SNP	ARIH2	ENST00000356401	human	ensembl	74_37	+1	known	silent	c.525	p.D175	0.974	pfscan_Znf_RING	pfam_Znf_C6HC,smart_Znf_RING,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	ARIH2	HGNC	ENSG00000177479				109	0	0	115	46	28.5714
DAG1	0	genome.wustl.edu	37	3	49548245	49548245	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	49548245	49548245	T	G	SNP	DAG1	ENST00000308775	human	ensembl	74_37	+1	known	missense	c.278	p.I93S	0.927	superfamily_Cadherin-like,smart_Cadg	pfam_DAG1,superfamily_Alpha-dystroglycan_domain_2,superfamily_Cadherin-like,smart_Cadg	-	no_errors	DAG1	HGNC	ENSG00000173402				30	0	0	21	18	46.1538
CDHR4	0	genome.wustl.edu	37	3	49836474	49836474	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	49836474	49836474	T	C	SNP	CDHR4	ENST00000412678	human	ensembl	74_37	-1	known	missense	c.356	p.Q119R	0.029	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR4	HGNC	ENSG00000187492				14	0	0	16	9	36
MST1R	0	genome.wustl.edu	37	3	49929015	49929015	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	49929015	49929015	T	C	SNP	MST1R	ENST00000296474	human	ensembl	74_37	-1	known	splice_site	c.3353-2	e16-2	1.000	-	-	-	no_errors	MST1R	HGNC	ENSG00000164078				63	0	0	115	32	21.7687
ITIH4	0	genome.wustl.edu	37	3	52854794	52854794	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	52854794	52854794	C	T	SNP	ITIH4	ENST00000266041	human	ensembl	74_37	-1	known	missense	c.1687	p.A563T	0.050	NULL	pfam_VIT,pfam_ITI_HC_C,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH4	HGNC	ENSG00000055955				46	0	0	34	11	24.4444
IL17RD	0	genome.wustl.edu	37	3	57132299	57132299	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	57132299	57132299	C	T	SNP	IL17RD	ENST00000296318	human	ensembl	74_37	-1	known	missense	c.1432	p.V478I	1.000	pfam_SEFIR	pfam_SEFIR,superfamily_TIR_dom	-	no_errors	IL17RD	HGNC	ENSG00000144730				37	0	0	54	18	25
PXK	0	genome.wustl.edu	37	3	58351616	58351616	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	58351616	58351616	G	A	SNP	PXK	ENST00000356151	human	ensembl	74_37	+1	known	missense	c.118	p.V40M	0.941	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Phox,superfamily_Kinase-like_dom,smart_Phox,pfscan_Phox,pfscan_WH2_dom,pfscan_Prot_kinase_dom	-	no_errors	PXK	HGNC	ENSG00000168297				25	0	0	30	10	25
PXK	0	genome.wustl.edu	37	3	58376325	58376325	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	58376325	58376325	G	A	SNP	PXK	ENST00000468776	human	ensembl	74_37	+1	known	missense	c.119	p.R40K	0.341	NULL	NULL	-	no_errors	PXK	HGNC	ENSG00000168297				41	0	0	36	9	20
ROBO2	0	genome.wustl.edu	37	3	77617584	77617584	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	77617584	77617584	C	T	SNP	ROBO2	ENST00000461745	human	ensembl	74_37	+1	known	missense	c.1970	p.T657M	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO2	HGNC	ENSG00000185008				59	0	0	55	13	19.1176
MTHFD2P1	0	genome.wustl.edu	37	3	95374407	95374407	+	RNA	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	95374407	95374407	T	C	SNP	MTHFD2P1	ENST00000494840	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MTHFD2P1	HGNC	ENSG00000244681				61	0	0	57	12	17.3913
CPNE9	0	genome.wustl.edu	37	3	9767682	9767682	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	9767682	9767682	A	G	SNP	CPNE9	ENST00000383832	human	ensembl	74_37	+1	known	missense	c.1291	p.I431V	1.000	pfam_Copine,smart_VWF_A,pfscan_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE9	HGNC	ENSG00000144550				88	0	0	85	22	20.5607
MTTP	0	genome.wustl.edu	37	4	100543904	100543904	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	100543904	100543904	G	A	SNP	MTTP	ENST00000265517	human	ensembl	74_37	+1	known	missense	c.2584	p.V862I	0.001	NULL	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	MTTP	HGNC	ENSG00000138823				89	0	0	51	25	32.8947
FGFRL1	0	genome.wustl.edu	37	4	1018193	1018193	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	1018193	1018193	C	T	SNP	FGFRL1	ENST00000264748	human	ensembl	74_37	+1	known	silent	c.813	p.R271	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FGFRL1	HGNC	ENSG00000127418				76	0	0	56	29	34.1176
MANBA	0	genome.wustl.edu	37	4	103635670	103635670	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	103635670	103635670	C	T	SNP	MANBA	ENST00000226578	human	ensembl	74_37	-1	known	missense	c.598	p.G200R	1.000	pfam_Glyco_hydro_2_N,superfamily_Galactose-bd-like	pfam_Glyco_hydro_2_N,pfam_Glyco_hydro_2_TIM,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,superfamily_Glyco_hydro_2_Ig-like	-	no_errors	MANBA	HGNC	ENSG00000109323				38	0	0	24	6	20
ZNF518B	0	genome.wustl.edu	37	4	10445986	10445986	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	10445986	10445986	G	A	SNP	ZNF518B	ENST00000326756	human	ensembl	74_37	-1	known	missense	c.1967	p.T656M	0.008	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF518B	HGNC	ENSG00000178163				142	0	0	76	14	15.5556
LEF1	0	genome.wustl.edu	37	4	108999528	108999528	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	108999528	108999528	G	A	SNP	LEF1	ENST00000265165	human	ensembl	74_37	-1	known	missense	c.856	p.H286Y	1.000	NULL	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	LEF1	HGNC	ENSG00000138795				183	0	0	87	72	45.283
CTBP1	0	genome.wustl.edu	37	4	1208171	1208171	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	1208171	1208171	G	A	SNP	CTBP1	ENST00000290921	human	ensembl	74_37	-1	known	missense	c.853	p.R285C	1.000	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,pfam_6PGDH_NADP-bd	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,pfam_6PGDH_NADP-bd	-	no_errors	CTBP1	HGNC	ENSG00000159692				8	0	0	5	3	37.5
PRDM5	0	genome.wustl.edu	37	4	121843685	121843685	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	121843685	121843685	G	A	SNP	PRDM5	ENST00000264808	human	ensembl	74_37	-1	known	missense	c.79	p.R27C	0.999	smart_SET_dom,pirsf_Znf_PRDM5,pfscan_SET_dom	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_SET_dom,smart_Znf_C2H2-like,pirsf_Znf_PRDM5,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM5	HGNC	ENSG00000138738				24	0	0	19	13	40.625
ANKRD50	0	genome.wustl.edu	37	4	125592251	125592251	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	125592251	125592251	G	A	SNP	ANKRD50	ENST00000504087	human	ensembl	74_37	-1	known	silent	c.2181	p.H727	0.863	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD50	HGNC	ENSG00000151458				95	0	0	45	18	28.5714
BOD1L1	0	genome.wustl.edu	37	4	13601959	13601959	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	13601959	13601959	C	T	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	missense	c.6565	p.D2189N	0.816	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219				46	0	0	39	23	37.0968
TBC1D9	0	genome.wustl.edu	37	4	141590817	141590817	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	141590817	141590817	G	A	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	missense	c.1408	p.R470W	1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436				29	0	0	25	10	28.5714
USP38	0	genome.wustl.edu	37	4	144106875	144106875	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	144106875	144106875	A	G	SNP	USP38	ENST00000307017	human	ensembl	74_37	+1	known	missense	c.272	p.Q91R	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP38	HGNC	ENSG00000170185				50	0	0	35	20	36.3636
MAB21L2	0	genome.wustl.edu	37	4	151505070	151505070	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	151505070	151505070	G	T	SNP	MAB21L2	ENST00000317605	human	ensembl	74_37	+1	known	missense	c.889	p.G297C	1.000	pfam_Mab-21_dom,pfscan_Ricin_B_lectin	pfam_Mab-21_dom,pfscan_Ricin_B_lectin	-	no_errors	MAB21L2	HGNC	ENSG00000181541				65	0	0	79	15	15.9574
DCHS2	0	genome.wustl.edu	37	4	155254527	155254527	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	155254527	155254527	C	T	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	missense	c.1336	p.V446M	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410				56	0	0	65	39	37.5
DDX60	0	genome.wustl.edu	37	4	169227858	169227858	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	169227858	169227858	G	A	SNP	DDX60	ENST00000393743	human	ensembl	74_37	-1	known	missense	c.278	p.A93V	0.008	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX60	HGNC	ENSG00000137628				56	0	0	36	24	40
FGFR3	0	genome.wustl.edu	37	4	1804680	1804680	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	1804680	1804680	C	T	SNP	FGFR3	ENST00000340107	human	ensembl	74_37	+1	known	missense	c.970	p.R324C	0.999	pirsf_FGF_rcpt_fam,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR3	HGNC	ENSG00000068078				15	0	0	8	7	46.6667
SLIT2	0	genome.wustl.edu	37	4	20597371	20597371	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	20597371	20597371	C	T	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	silent	c.3234	p.D1078	0.227	smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				125	1	0.793651	73	50	40.6504
FAM193A	0	genome.wustl.edu	37	4	2698298	2698298	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	2698298	2698298	G	A	SNP	FAM193A	ENST00000324666	human	ensembl	74_37	+1	known	missense	c.2612	p.R871Q	1.000	NULL	NULL	-	no_errors	FAM193A	HGNC	ENSG00000125386				31	0	0	24	14	36.8421
PCDH7	0	genome.wustl.edu	37	4	30723127	30723127	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	30723127	30723127	C	T	SNP	PCDH7	ENST00000543491	human	ensembl	74_37	+1	known	missense	c.83	p.A28V	1.000	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH7	HGNC	ENSG00000169851				12	0	0	18	13	41.9355
HTT	0	genome.wustl.edu	37	4	3189409	3189409	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	3189409	3189409	C	T	SNP	HTT	ENST00000355072	human	ensembl	74_37	+1	known	missense	c.5021	p.S1674L	1.000	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386				120	0	0	49	48	49.4845
HGFAC	0	genome.wustl.edu	37	4	3449696	3449696	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	3449696	3449696	G	A	SNP	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	missense	c.1570	p.E524K	0.633	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758				10	0	0	16	3	15.7895
KCTD8	0	genome.wustl.edu	37	4	44449851	44449851	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	44449851	44449851	C	T	SNP	KCTD8	ENST00000360029	human	ensembl	74_37	-1	known	silent	c.690	p.R230	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD8	HGNC	ENSG00000183783				13	0	0	7	13	65
ATP10D	0	genome.wustl.edu	37	4	47525167	47525167	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	47525167	47525167	G	A	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	silent	c.624	p.E208	1.000	pfam_ATPase_P-typ_transduc_dom_A,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246				55	0	0	15	17	53.125
CNGA1	0	genome.wustl.edu	37	4	47954605	47954605	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	47954605	47954605	T	C	SNP	CNGA1	ENST00000402813	human	ensembl	74_37	-1	known	silent	c.321	p.A107	0.948	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA1	HGNC	ENSG00000198515				40	0	0	16	12	42.8571
KIT	0	genome.wustl.edu	37	4	55524194	55524194	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	55524194	55524194	C	T	SNP	KIT	ENST00000288135	human	ensembl	74_37	+1	known	missense	c.13	p.R5C	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	KIT	HGNC	ENSG00000157404				31	0	0	24	17	41.4634
PPAT	0	genome.wustl.edu	37	4	57267591	57267591	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	57267591	57267591	T	C	SNP	PPAT	ENST00000264220	human	ensembl	74_37	-1	known	missense	c.791	p.Q264R	0.218	pirsf_Amd_phspho_trans,tigrfam_Amd_phspho_trans	pfam_GATase_dom,pfam_PRibTrfase_dom,pirsf_Amd_phspho_trans,tigrfam_Amd_phspho_trans	-	no_errors	PPAT	HGNC	ENSG00000128059				22	0	0	8	7	46.6667
ART3	0	genome.wustl.edu	37	4	77003516	77003516	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	77003516	77003516	C	T	SNP	ART3	ENST00000355810	human	ensembl	74_37	+1	known	silent	c.609	p.I203	0.930	pfam_ART,prints_ART	pfam_ART,prints_ART	-	no_errors	ART3	HGNC	ENSG00000156219				56	0	0	20	15	42.8571
SHROOM3	0	genome.wustl.edu	37	4	77662485	77662485	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	77662485	77662485	C	T	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	silent	c.3159	p.S1053	0.000	pfam_ASD1	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771				15	0	0	15	11	42.3077
FRAS1	0	genome.wustl.edu	37	4	79188036	79188036	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	79188036	79188036	C	T	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	missense	c.736	p.R246W	0.910	pfam_VWF_C,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	pfam_Calx_beta,pfam_VWF_C,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_VWC_out,smart_VWF_C,smart_Furin_repeat,smart_EG-like_dom,smart_Calx_beta,pfscan_VWF_C	-	no_errors	FRAS1	HGNC	ENSG00000138759				10	0	0	8	6	42.8571
MMRN1	0	genome.wustl.edu	37	4	90872776	90872776	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	90872776	90872776	C	T	SNP	MMRN1	ENST00000264790	human	ensembl	74_37	+1	known	missense	c.3139	p.R1047W	0.048	pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_C1q,pfam_EMI_domain,pfam_EG-like_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MMRN1	HGNC	ENSG00000138722				39	0	0	28	14	33.3333
SLCO4C1	0	genome.wustl.edu	37	5	101606375	101606375	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	101606375	101606375	G	A	SNP	SLCO4C1	ENST00000310954	human	ensembl	74_37	-1	known	missense	c.755	p.A252V	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO4C1	HGNC	ENSG00000173930				47	0	0	21	12	36.3636
HSD17B4	0	genome.wustl.edu	37	5	118829515	118829515	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	118829515	118829515	C	T	SNP	HSD17B4	ENST00000256216	human	ensembl	74_37	+1	known	missense	c.742	p.R248C	1.000	NULL	pfam_MaoC_dom,pfam_DH_sc/Rdtase_SDR,pfam_SCP2_sterol-bd_dom,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,smart_PKS/FAS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B4	HGNC	ENSG00000133835				40	0	0	15	11	42.3077
ADAMTS19	0	genome.wustl.edu	37	5	128797351	128797351	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	128797351	128797351	G	A	SNP	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	silent	c.630	p.P210	0.000	pfam_Peptidase_M12B_N	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808				39	0	0	17	14	45.1613
CHSY3	0	genome.wustl.edu	37	5	129241306	129241306	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	129241306	129241306	G	A	SNP	CHSY3	ENST00000305031	human	ensembl	74_37	+1	known	missense	c.784	p.D262N	1.000	pfam_Fringe-like	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY3	HGNC	ENSG00000198108				103	0	0	88	65	42.4837
IL13	0	genome.wustl.edu	37	5	131993886	131993886	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	131993886	131993886	C	T	SNP	IL13	ENST00000304506	human	ensembl	74_37	+1	known	missense	c.8	p.P3L	0.000	NULL	pfam_IL-13,superfamily_4_helix_cytokine-like_core,smart_IL-4/IL-13,prints_IL-13	-	no_errors	IL13	HGNC	ENSG00000169194				33	0	0	22	13	37.1429
SHROOM1	0	genome.wustl.edu	37	5	132159003	132159003	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	132159003	132159003	C	T	SNP	SHROOM1	ENST00000378679	human	ensembl	74_37	-1	known	missense	c.2165	p.R722H	1.000	pfam_ASD2	pfam_ASD2,pfam_ASD1	-	no_errors	SHROOM1	HGNC	ENSG00000164403				19	0	0	39	4	9.30233
PCDHA7	0	genome.wustl.edu	37	5	140215251	140215251	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	140215251	140215251	G	A	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	missense	c.1283	p.R428Q	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963				135	0	0	132	77	36.8421
PCDH1	0	genome.wustl.edu	37	5	141242842	141242842	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	141242842	141242842	G	A	SNP	PCDH1	ENST00000287008	human	ensembl	74_37	-1	known	silent	c.3054	p.S1018	0.993	pfam_Protocadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH1	HGNC	ENSG00000156453				41	0	0	37	18	32.7273
POU4F3	0	genome.wustl.edu	37	5	145719765	145719765	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	145719765	145719765	T	C	SNP	POU4F3	ENST00000230732	human	ensembl	74_37	+1	known	missense	c.775	p.Y259H	1.000	superfamily_Homeodomain-like	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F3	HGNC	ENSG00000091010				87	0	0	57	43	43
CSF1R	0	genome.wustl.edu	37	5	149447865	149447865	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	149447865	149447865	G	T	SNP	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	missense	c.1539	p.F513L	0.807	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578				56	0	0	48	26	35.1351
PDGFRB	0	genome.wustl.edu	37	5	149513265	149513265	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	149513265	149513265	C	T	SNP	PDGFRB	ENST00000261799	human	ensembl	74_37	-1	known	missense	c.818	p.R273H	0.997	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRB	HGNC	ENSG00000113721				177	0	0	99	52	34.4371
SLC6A7	0	genome.wustl.edu	37	5	149576672	149576672	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	149576672	149576672	C	T	SNP	SLC6A7	ENST00000230671	human	ensembl	74_37	+1	known	silent	c.417	p.Y139	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A7	HGNC	ENSG00000011083				73	0	0	39	27	40.9091
MYOZ3	0	genome.wustl.edu	37	5	150050052	150050052	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	150050052	150050052	C	T	SNP	MYOZ3	ENST00000297130	human	ensembl	74_37	+1	known	missense	c.68	p.T23M	0.000	pfam_Calsarcin-bd	pfam_Calsarcin-bd	-	no_errors	MYOZ3	HGNC	ENSG00000164591				16	0	0	14	9	39.1304
ITK	0	genome.wustl.edu	37	5	156668718	156668718	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	156668718	156668718	G	T	SNP	ITK	ENST00000422843	human	ensembl	74_37	+1	known	missense	c.1048	p.G350W	1.000	superfamily_Kinase-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_Znf_Btk_motif,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ITK	HGNC	ENSG00000113263				52	0	0	14	17	54.8387
LCP2	0	genome.wustl.edu	37	5	169714973	169714973	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	169714973	169714973	C	T	SNP	LCP2	ENST00000046794	human	ensembl	74_37	-1	known	splice_site	c.188+1	e3+1	1.000	-	-	-	no_errors	LCP2	HGNC	ENSG00000043462				32	0	0	14	10	41.6667
TLX3	0	genome.wustl.edu	37	5	170737354	170737354	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	170737354	170737354	G	A	SNP	TLX3	ENST00000296921	human	ensembl	74_37	+1	known	missense	c.622	p.A208T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	TLX3	HGNC	ENSG00000164438				17	0	0	12	6	33.3333
BNIP1	0	genome.wustl.edu	37	5	172590743	172590743	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	172590743	172590743	C	T	SNP	BNIP1	ENST00000231668	human	ensembl	74_37	+1	known	missense	c.635	p.T212M	1.000	pfam_Sec20	pfam_Sec20	-	no_errors	BNIP1	HGNC	ENSG00000113734				47	0	0	31	22	41.5094
UIMC1	0	genome.wustl.edu	37	5	176395772	176395772	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	176395772	176395772	A	G	SNP	UIMC1	ENST00000377219	human	ensembl	74_37	-1	known	silent	c.984	p.P328	0.431	NULL	smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif	-	no_errors	UIMC1	HGNC	ENSG00000087206				102	0	0	62	4	6.06061
GRK6	0	genome.wustl.edu	37	5	176863243	176863243	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	176863243	176863243	C	T	SNP	GRK6	ENST00000528793	human	ensembl	74_37	+1	known	silent	c.1227	p.S409	0.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK6	HGNC	ENSG00000198055				66	0	0	43	36	45.5696
ZNF354A	0	genome.wustl.edu	37	5	178152470	178152470	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	178152470	178152470	G	A	SNP	ZNF354A	ENST00000335815	human	ensembl	74_37	-1	known	missense	c.163	p.L55F	0.415	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF354A	HGNC	ENSG00000169131				73	0	0	45	35	43.75
ZNF454	0	genome.wustl.edu	37	5	178373922	178373922	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	178373922	178373922	C	T	SNP	ZNF454	ENST00000320129	human	ensembl	74_37	+1	known	missense	c.185	p.T62M	0.000	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF454	HGNC	ENSG00000178187				107	0	0	75	7	8.53659
ITGA1	0	genome.wustl.edu	37	5	52214676	52214676	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	52214676	52214676	A	G	SNP	ITGA1	ENST00000282588	human	ensembl	74_37	+1	known	silent	c.2103	p.T701	0.247	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA1	HGNC	ENSG00000213949				60	0	0	23	15	39.4737
MARVELD2	0	genome.wustl.edu	37	5	68716104	68716104	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	68716104	68716104	G	A	SNP	MARVELD2	ENST00000325631	human	ensembl	74_37	+1	known	missense	c.892	p.V298I	0.881	pfam_Marvel	pfam_Occludin_RNApol2_elong_fac_ELL,pfam_Marvel	-	no_errors	MARVELD2	HGNC	ENSG00000152939				91	0	0	47	29	38.1579
VCAN	0	genome.wustl.edu	37	5	82816265	82816265	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	82816265	82816265	G	A	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.2140	p.G714R	0.000	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				50	0	0	23	10	30.303
COX7C	0	genome.wustl.edu	37	5	85914004	85914004	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	85914004	85914004	C	T	SNP	COX7C	ENST00000510447	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	COX7C	HGNC	ENSG00000127184				17	0	0	17	14	45.1613
NR2F1	0	genome.wustl.edu	37	5	92924138	92924138	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	92924138	92924138	C	T	SNP	NR2F1	ENST00000327111	human	ensembl	74_37	+1	known	silent	c.979	p.L327	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_COUP_TF,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	NR2F1	HGNC	ENSG00000175745				31	0	0	45	24	34.7826
PRDM13	0	genome.wustl.edu	37	6	100054917	100054917	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	100054917	100054917	G	A	SNP	PRDM13	ENST00000369215	human	ensembl	74_37	+1	known	missense	c.7	p.G3R	0.979	NULL	smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM13	HGNC	ENSG00000112238				26	0	0	26	10	27.7778
ENPP1	0	genome.wustl.edu	37	6	132179844	132179844	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	132179844	132179844	T	C	SNP	ENPP1	ENST00000360971	human	ensembl	74_37	+1	known	missense	c.752	p.V251A	0.979	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENPP1	HGNC	ENSG00000197594				26	0	0	21	8	27.5862
TAAR1	0	genome.wustl.edu	37	6	132966154	132966154	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	132966154	132966154	C	A	SNP	TAAR1	ENST00000275216	human	ensembl	74_37	-1	known	missense	c.989	p.R330M	0.013	prints_TAAR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn,prints_TAAR1,prints_TAAR_fam,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	TAAR1	HGNC	ENSG00000146399				33	0	0	16	9	36
HECA	0	genome.wustl.edu	37	6	139488396	139488396	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	139488396	139488396	G	A	SNP	HECA	ENST00000367658	human	ensembl	74_37	+1	known	missense	c.1247	p.G416E	1.000	NULL	superfamily_Glycoside_hydrolase_SF	-	no_errors	HECA	HGNC	ENSG00000112406				67	0	0	39	20	33.8983
TXLNB	0	genome.wustl.edu	37	6	139563885	139563885	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	139563885	139563885	G	A	SNP	TXLNB	ENST00000358430	human	ensembl	74_37	-1	known	silent	c.1833	p.S611	0.000	NULL	pfam_Taxilin_fam	-	no_errors	TXLNB	HGNC	ENSG00000164440				96	0	0	75	69	47.9167
GRM1	0	genome.wustl.edu	37	6	146351103	146351103	+	Silent	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	146351103	146351103	C	A	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	silent	c.450	p.G150	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_1	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				74	0	0	47	26	35.6164
LATS1	0	genome.wustl.edu	37	6	150023031	150023031	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	150023031	150023031	A	G	SNP	LATS1	ENST00000253339	human	ensembl	74_37	-1	known	silent	c.232	p.L78	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,pfam_UBA/Ts_N,superfamily_Kinase-like_dom,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	LATS1	HGNC	ENSG00000131023				141	0	0	58	43	42.5743
TIAM2	0	genome.wustl.edu	37	6	155451082	155451082	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	155451082	155451082	C	T	SNP	TIAM2	ENST00000456144	human	ensembl	74_37	+1	known	missense	c.725	p.S242F	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,superfamily_HR1_rho-bd,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM2	HGNC	ENSG00000146426				67	0	0	65	43	39.8148
KIAA0319	0	genome.wustl.edu	37	6	24596335	24596335	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	24596335	24596335	C	T	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	silent	c.567	p.P189	0.000	NULL	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261				43	0	0	25	28	52.8302
HIST1H2BO	0	genome.wustl.edu	37	6	27861423	27861423	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	27861423	27861423	C	T	SNP	HIST1H2BO	ENST00000303806	human	ensembl	74_37	+1	known	silent	c.183	p.G61	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BO	HGNC	ENSG00000196331				132	0	0	104	83	44.385
BRD2	0	genome.wustl.edu	37	6	32947706	32947706	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	32947706	32947706	G	A	SNP	BRD2	ENST00000395289	human	ensembl	74_37	+1	known	missense	c.2048	p.R683Q	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD2	HGNC	ENSG00000204256				41	0	0	26	17	39.5349
CDKN1A	0	genome.wustl.edu	37	6	36652259	36652259	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	36652259	36652259	T	C	SNP	CDKN1A	ENST00000448526	human	ensembl	74_37	+1	known	silent	c.483	p.A161	0.072	NULL	pfam_CDI	-	no_errors	CDKN1A	HGNC	ENSG00000124762				32	0	0	23	17	42.5
FOXP4	0	genome.wustl.edu	37	6	41553174	41553174	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	41553174	41553174	G	A	SNP	FOXP4	ENST00000373057	human	ensembl	74_37	+1	known	splice_site	c.424-1	e4-1	1.000	-	-	-	no_errors	FOXP4	HGNC	ENSG00000137166				48	0	0	36	22	37.931
PPP2R5D	0	genome.wustl.edu	37	6	42974387	42974387	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	42974387	42974387	C	T	SNP	PPP2R5D	ENST00000485511	human	ensembl	74_37	+1	known	missense	c.292	p.R98W	1.000	pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5D	HGNC	ENSG00000112640				57	0	0	46	46	50
KLHDC3	0	genome.wustl.edu	37	6	42985381	42985381	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	42985381	42985381	C	T	SNP	KLHDC3	ENST00000326974	human	ensembl	74_37	+1	known	silent	c.279	p.G93	0.003	NULL	pfam_Kelch_2,pfam_Kelch_1	-	no_errors	KLHDC3	HGNC	ENSG00000124702				74	0	0	48	17	26.1538
TTBK1	0	genome.wustl.edu	37	6	43252016	43252016	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	43252016	43252016	G	A	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	missense	c.3538	p.A1180T	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216				21	0	0	12	11	47.8261
CLIC5	0	genome.wustl.edu	37	6	45922903	45922903	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	45922903	45922903	C	T	SNP	CLIC5	ENST00000185206	human	ensembl	74_37	-1	known	missense	c.619	p.V207M	1.000	superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	-	no_errors	CLIC5	HGNC	ENSG00000112782				51	0	0	23	13	36.1111
MEP1A	0	genome.wustl.edu	37	6	46806746	46806746	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	46806746	46806746	C	T	SNP	MEP1A	ENST00000230588	human	ensembl	74_37	+1	known	missense	c.2114	p.T705M	1.000	pirsf_Pept_M12A_Meprin,pfam_EG-like_dom,pfscan_EG-like_dom	pirsf_Pept_M12A_Meprin,pfam_Peptidase_M12A,pfam_MATH,pfam_MAM_dom,pfam_EG-like_dom,superfamily_TRAF-like,superfamily_ConA-like_lec_gl_sf,smart_Peptidase_Metallo,smart_MAM_dom,smart_MATH,prints_Peptidase_M12A,prints_MAM_dom,pfscan_EG-like_dom,pfscan_MATH,pfscan_MAM_dom	-	no_errors	MEP1A	HGNC	ENSG00000112818				138	0	0	132	69	34.3284
MUT	0	genome.wustl.edu	37	6	49426894	49426894	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	49426894	49426894	A	G	SNP	MUT	ENST00000274813	human	ensembl	74_37	-1	known	missense	c.286	p.Y96H	1.000	pfam_MeMalonylCoA_mutase_a/b_cat,superfamily_Cbl-dep_enz_cat,tigrfam_MMCoA_mutase_a_cat	pfam_MeMalonylCoA_mutase_a/b_cat,pfam_Cobalamin-bd,superfamily_Cbl-dep_enz_cat,superfamily_Cobalamin-bd,tigrfam_MMCoA_mutase_a_cat,tigrfam_Acid_CoA_mut_C	-	no_errors	MUT	HGNC	ENSG00000146085				48	0	0	34	30	46.875
RPP40	0	genome.wustl.edu	37	6	4996269	4996269	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	4996269	4996269	C	T	SNP	RPP40	ENST00000380051	human	ensembl	74_37	-1	known	missense	c.809	p.S270N	0.709	pfam_RNase_P_Rpp40	pfam_RNase_P_Rpp40	-	no_errors	RPP40	HGNC	ENSG00000124787				50	0	0	39	3	7.14286
RREB1	0	genome.wustl.edu	37	6	7230385	7230385	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	7230385	7230385	G	A	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.2053	p.A685T	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				45	0	0	30	28	48.2759
CAGE1	0	genome.wustl.edu	37	6	7365800	7365800	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	7365800	7365800	G	T	SNP	CAGE1	ENST00000338150	human	ensembl	74_37	-1	known	missense	c.2094	p.D698E	0.000	NULL	NULL	-	no_errors	CAGE1	HGNC	ENSG00000164304				21	0	0	8	8	50
KCNQ5	0	genome.wustl.edu	37	6	73843172	73843172	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	73843172	73843172	C	T	SNP	KCNQ5	ENST00000402622	human	ensembl	74_37	+1	known	missense	c.1306	p.R436C	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ5	HGNC	ENSG00000185760				52	0	0	52	27	34.1772
CASP8AP2	0	genome.wustl.edu	37	6	90573828	90573828	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	90573828	90573828	G	A	SNP	CASP8AP2	ENST00000237177	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	CASP8AP2	HGNC	ENSG00000118412				97	0	0	88	8	8.33333
MANEA	0	genome.wustl.edu	37	6	96034484	96034484	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	96034484	96034484	A	G	SNP	MANEA	ENST00000358812	human	ensembl	74_37	+1	known	missense	c.169	p.K57E	0.117	NULL	superfamily_Glycoside_hydrolase_SF	-	no_errors	MANEA	HGNC	ENSG00000172469				73	0	0	34	18	34.6154
MANEA	0	genome.wustl.edu	37	6	96034832	96034832	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	96034832	96034832	A	G	SNP	MANEA	ENST00000358812	human	ensembl	74_37	+1	known	missense	c.517	p.M173V	1.000	superfamily_Glycoside_hydrolase_SF	superfamily_Glycoside_hydrolase_SF	-	no_errors	MANEA	HGNC	ENSG00000172469				75	0	0	37	43	53.75
MANEA	0	genome.wustl.edu	37	6	96053724	96053724	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	96053724	96053724	T	C	SNP	MANEA	ENST00000358812	human	ensembl	74_37	+1	known	missense	c.832	p.W278R	1.000	NULL	superfamily_Glycoside_hydrolase_SF	-	no_errors	MANEA	HGNC	ENSG00000172469				56	0	0	42	3	6.66667
UFL1	0	genome.wustl.edu	37	6	96986656	96986656	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	96986656	96986656	C	T	SNP	UFL1	ENST00000369278	human	ensembl	74_37	+1	known	silent	c.1128	p.F376	1.000	NULL	pfam_E3_UFM1_ligase_1	-	no_errors	UFL1	HGNC	ENSG00000014123				56	0	0	28	12	30
PNISR	0	genome.wustl.edu	37	6	99848925	99848925	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	99848925	99848925	G	A	SNP	PNISR	ENST00000369239	human	ensembl	74_37	-1	known	nonsense	c.1909	p.R637*	1.000	NULL	NULL	-	no_errors	PNISR	HGNC	ENSG00000132424				54	0	0	38	23	37.7049
PNISR	0	genome.wustl.edu	37	6	99857094	99857094	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	99857094	99857094	G	A	SNP	PNISR	ENST00000369239	human	ensembl	74_37	-1	known	missense	c.628	p.R210C	1.000	NULL	NULL	-	no_errors	PNISR	HGNC	ENSG00000132424				34	0	0	20	7	25.9259
ENSG00000241357	0	genome.wustl.edu	37	7	100034028	100034028	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	100034028	100034028	C	T	SNP	ENSG00000241357	ENST00000492523	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-758P17.2	Clone_based_vega_gene	ENSG00000241357				22	0	0	21	7	25
ZAN	0	genome.wustl.edu	37	7	100357453	100357453	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	100357453	100357453	G	A	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	silent	c.3681	p.K1227	0.913	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839				25	0	0	14	4	22.2222
CUX1	0	genome.wustl.edu	37	7	101845115	101845115	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	101845115	101845115	G	A	SNP	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	silent	c.2571	p.T857	0.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923				38	0	0	29	33	53.2258
RELN	0	genome.wustl.edu	37	7	103368593	103368593	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	103368593	103368593	C	T	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.718	p.V240I	1.000	NULL	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				54	0	0	26	16	38.0952
CDHR3	0	genome.wustl.edu	37	7	105635244	105635244	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	105635244	105635244	C	T	SNP	CDHR3	ENST00000317716	human	ensembl	74_37	+1	known	silent	c.561	p.G187	0.819	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR3	HGNC	ENSG00000128536				23	0	0	11	4	26.6667
LAMB1	0	genome.wustl.edu	37	7	107615542	107615542	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	107615542	107615542	A	G	SNP	LAMB1	ENST00000222399	human	ensembl	74_37	-1	known	silent	c.1371	p.S457	0.935	pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Prefoldin,superfamily_t-SNARE,superfamily_P-loop_NTPase,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB1	HGNC	ENSG00000091136				39	0	0	20	18	47.3684
DOCK4	0	genome.wustl.edu	37	7	111368616	111368616	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	111368616	111368616	T	C	SNP	DOCK4	ENST00000428084	human	ensembl	74_37	-1	known	missense	c.5642	p.Q1881R	0.002	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK4	HGNC	ENSG00000128512				49	0	0	64	40	38.4615
PTPRZ1	0	genome.wustl.edu	37	7	121651137	121651137	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	121651137	121651137	T	C	SNP	PTPRZ1	ENST00000393386	human	ensembl	74_37	+1	known	silent	c.2037	p.T679	0.021	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRZ1	HGNC	ENSG00000106278				50	0	0	23	17	42.5
STRIP2	0	genome.wustl.edu	37	7	129096402	129096402	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	129096402	129096402	G	A	SNP	STRIP2	ENST00000249344	human	ensembl	74_37	+1	known	silent	c.957	p.P319	0.014	pfam_N1221	pfam_DUF3402,pfam_N1221	-	no_errors	STRIP2	HGNC	ENSG00000128578				58	0	0	67	38	36.1905
C7orf49	0	genome.wustl.edu	37	7	134851386	134851386	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	134851386	134851386	C	T	SNP	C7orf49	ENST00000393114	human	ensembl	74_37	-1	known	missense	c.451	p.V151I	0.996	NULL	NULL	-	no_errors	C7orf49	HGNC	ENSG00000122783				79	0	0	37	27	42.1875
NUP205	0	genome.wustl.edu	37	7	135322803	135322803	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	135322803	135322803	A	G	SNP	NUP205	ENST00000285968	human	ensembl	74_37	+1	known	missense	c.5261	p.Q1754R	1.000	NULL	pfam_Nup186/Nup192/Nup205	-	no_errors	NUP205	HGNC	ENSG00000155561				77	0	0	43	20	31.746
MIR490	0	genome.wustl.edu	37	7	136587854	136587854	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	136587854	136587854	G	A	SNP	MIR490	ENST00000608269	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	hsa-mir-490	miRBase	ENSG00000234352				64	0	0	31	17	35.4167
BRAF	0	genome.wustl.edu	37	7	140476719	140476719	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	140476719	140476719	C	A	SNP	BRAF	ENST00000288602	human	ensembl	74_37	-1	known	missense	c.1687	p.G563C	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	BRAF	HGNC	ENSG00000157764				61	0	0	30	17	36.1702
TRPV6	0	genome.wustl.edu	37	7	142571332	142571332	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	142571332	142571332	A	C	SNP	TRPV6	ENST00000359396	human	ensembl	74_37	-1	known	missense	c.1657	p.F553V	0.996	pfam_Ion_trans_dom,tigrfam_TRP_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6,prints_TRPV6_channel,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV6	HGNC	ENSG00000165125				161	0	0	73	64	46.7153
GSTK1	0	genome.wustl.edu	37	7	142960705	142960705	+	RNA	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	142960705	142960705	A	G	SNP	GSTK1	ENST00000494735	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GSTK1	HGNC	ENSG00000197448				40	0	0	39	28	41.791
SSPO	0	genome.wustl.edu	37	7	149499038	149499038	+	RNA	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	149499038	149499038	G	T	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				27	0	0	13	8	38.0952
ZNF862	0	genome.wustl.edu	37	7	149557637	149557637	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	149557637	149557637	G	A	SNP	ZNF862	ENST00000223210	human	ensembl	74_37	+1	known	missense	c.1388	p.R463H	0.985	smart_Znf_TTF	pfam_Krueppel-associated_box,pfam_HATC_dom_C,superfamily_Krueppel-associated_box,superfamily_RNaseH-like_dom,smart_Krueppel-associated_box,smart_Znf_TTF,pfscan_Krueppel-associated_box	-	no_errors	ZNF862	HGNC	ENSG00000106479				135	0	0	105	17	13.9344
ATP6V0E2	0	genome.wustl.edu	37	7	149575867	149575867	+	RNA	SNP	G	G	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	149575867	149575867	G	C	SNP	ATP6V0E2	ENST00000483478	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATP6V0E2	HGNC	ENSG00000171130				46	0	0	30	27	47.3684
ASIC3	0	genome.wustl.edu	37	7	150749150	150749150	+	Splice_Site	SNP	G	G	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	150749150	150749150	G	C	SNP	ASIC3	ENST00000297512	human	ensembl	74_37	+1	known	splice_site	c.1386+1	e8+1	1.000	-	-	-	no_errors	ASIC3	HGNC	ENSG00000213199				79	0	0	55	38	40.8602
AGAP3	0	genome.wustl.edu	37	7	150820859	150820859	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	150820859	150820859	C	T	SNP	AGAP3	ENST00000485904	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AGAP3	HGNC	ENSG00000133612				48	0	0	32	14	30.4348
RBM33	0	genome.wustl.edu	37	7	155493520	155493520	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	155493520	155493520	A	T	SNP	RBM33	ENST00000401878	human	ensembl	74_37	+1	known	missense	c.621	p.E207D	1.000	NULL	smart_RRM_dom	-	no_errors	RBM33	HGNC	ENSG00000184863				13	0	0	5	6	54.5455
ABCB5	0	genome.wustl.edu	37	7	20682989	20682989	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	20682989	20682989	G	A	SNP	ABCB5	ENST00000404938	human	ensembl	74_37	+1	putative	missense	c.497	p.R166H	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846				58	0	0	29	3	9.375
IQCE	0	genome.wustl.edu	37	7	2645582	2645582	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	2645582	2645582	G	A	SNP	IQCE	ENST00000402050	human	ensembl	74_37	+1	known	missense	c.1816	p.V606I	0.049	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCE	HGNC	ENSG00000106012				37	0	0	29	24	45.283
CARD11	0	genome.wustl.edu	37	7	2959065	2959065	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	2959065	2959065	C	T	SNP	CARD11	ENST00000396946	human	ensembl	74_37	-1	known	silent	c.2451	p.A817	0.188	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD	-	no_errors	CARD11	HGNC	ENSG00000198286				47	0	0	35	35	50
HERPUD2	0	genome.wustl.edu	37	7	35678044	35678044	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	35678044	35678044	G	T	SNP	HERPUD2	ENST00000311350	human	ensembl	74_37	-1	known	missense	c.533	p.P178H	0.896	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	HERPUD2	HGNC	ENSG00000122557				51	0	0	27	9	25
AEBP1	0	genome.wustl.edu	37	7	44144463	44144463	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	44144463	44144463	C	T	SNP	AEBP1	ENST00000223357	human	ensembl	74_37	+1	known	nonsense	c.199	p.R67*	0.001	NULL	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	AEBP1	HGNC	ENSG00000106624				11	0	0	4	5	55.5556
POLD2	0	genome.wustl.edu	37	7	44157558	44157558	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	44157558	44157558	C	T	SNP	POLD2	ENST00000406581	human	ensembl	74_37	-1	known	missense	c.326	p.R109Q	1.000	NULL	pfam_DNA_pol_alpha/epsilon_bsu	-	no_errors	POLD2	HGNC	ENSG00000106628				75	0	0	54	44	44.898
PKD1L1	0	genome.wustl.edu	37	7	47925507	47925507	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	47925507	47925507	G	A	SNP	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	silent	c.2982	p.P994	0.000	pfam_PKD/REJ-like,pfscan_REJ-like	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683				76	0	0	57	41	41.8367
ABCA13	0	genome.wustl.edu	37	7	48563978	48563978	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	48563978	48563978	G	A	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.14186	p.R4729H	0.001	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869				30	0	0	12	5	29.4118
MMD2	0	genome.wustl.edu	37	7	4947221	4947221	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	4947221	4947221	C	T	SNP	MMD2	ENST00000404774	human	ensembl	74_37	-1	known	missense	c.619	p.E207K	0.979	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	MMD2	HGNC	ENSG00000136297				56	0	0	46	22	32.3529
IKZF1	0	genome.wustl.edu	37	7	50459497	50459497	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	50459497	50459497	C	T	SNP	IKZF1	ENST00000440768	human	ensembl	74_37	+1	known	missense	c.658	p.R220C	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF1	HGNC	ENSG00000185811				32	0	0	15	12	44.4444
FIGNL1	0	genome.wustl.edu	37	7	50514212	50514212	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	50514212	50514212	C	T	SNP	FIGNL1	ENST00000356889	human	ensembl	74_37	-1	known	silent	c.774	p.K258	0.724	NULL	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGNL1	HGNC	ENSG00000132436				87	0	0	32	20	38.4615
TNRC18	0	genome.wustl.edu	37	7	5347890	5347890	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	5347890	5347890	C	T	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	silent	c.8754	p.S2918	0.994	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095				19	0	0	13	6	31.5789
TNRC18	0	genome.wustl.edu	37	7	5348943	5348943	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	5348943	5348943	G	A	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	silent	c.8445	p.G2815	1.000	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095				33	0	0	24	15	38.4615
PMS2	0	genome.wustl.edu	37	7	6026915	6026915	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	6026915	6026915	G	A	SNP	PMS2	ENST00000265849	human	ensembl	74_37	-1	known	missense	c.1481	p.S494L	0.718	NULL	pfam_MutL_C,pfam_DNA_mismatch_repair_C,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_MutL_C,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS2	HGNC	ENSG00000122512				85	0	0	56	45	44.5545
AUTS2	0	genome.wustl.edu	37	7	69900851	69900851	+	RNA	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	69900851	69900851	A	G	SNP	AUTS2	ENST00000475660	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AUTS2	HGNC	ENSG00000158321				34	0	0	22	19	46.3415
CLIP2	0	genome.wustl.edu	37	7	73771801	73771801	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	73771801	73771801	T	C	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	+1	known	silent	c.1209	p.H403	0.822	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665				19	0	0	20	8	28.5714
RHBDD2	0	genome.wustl.edu	37	7	75511206	75511206	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	75511206	75511206	G	A	SNP	RHBDD2	ENST00000006777	human	ensembl	74_37	+1	known	missense	c.238	p.A80T	0.003	pfam_Peptidase_S54_rhomboid_dom	pfam_Peptidase_S54_rhomboid_dom	-	no_errors	RHBDD2	HGNC	ENSG00000005486				116	0	0	80	58	42.029
PCLO	0	genome.wustl.edu	37	7	82578874	82578874	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	82578874	82578874	C	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.11030	p.R3677H	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				162	0	0	106	49	31.6129
ABCB1	0	genome.wustl.edu	37	7	87214926	87214926	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	87214926	87214926	G	T	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.188	p.A63D	0.897	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563				50	0	0	35	14	28.5714
AKAP9	0	genome.wustl.edu	37	7	91645529	91645529	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	91645529	91645529	C	T	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	silent	c.3735	p.Y1245	0.000	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914				25	0	0	6	10	62.5
PEX1	0	genome.wustl.edu	37	7	92147285	92147285	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	92147285	92147285	G	A	SNP	PEX1	ENST00000248633	human	ensembl	74_37	-1	known	missense	c.544	p.R182C	0.924	NULL	pfam_ATPase_AAA_core,pfam_Peroxisome_synth_fac_1_a/b,pfam_PEX-1N,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase	-	no_errors	PEX1	HGNC	ENSG00000127980				49	0	0	31	13	29.5455
SGCE	0	genome.wustl.edu	37	7	94285328	94285328	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	94285328	94285328	G	A	SNP	SGCE	ENST00000445866	human	ensembl	74_37	-1	known	missense	c.83	p.A28V	1.000	NULL	pfam_Sarcoglycan_2,superfamily_Cadherin-like,smart_Cadg	-	no_errors	SGCE	HGNC	ENSG00000127990				18	0	0	43	5	10.4167
PPP1R9A	0	genome.wustl.edu	37	7	94540617	94540617	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	94540617	94540617	C	T	SNP	PPP1R9A	ENST00000289495	human	ensembl	74_37	+1	known	missense	c.1192	p.H398Y	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,pfam_PDZ,superfamily_PDZ,superfamily_SAM/pointed,superfamily_Smac_DIABLO-like,smart_PDZ,smart_SAM,pfscan_PDZ,pfscan_SAM	-	no_errors	PPP1R9A	HGNC	ENSG00000158528				37	0	0	28	3	9.67742
TRRAP	0	genome.wustl.edu	37	7	98556979	98556979	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	98556979	98556979	A	G	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	missense	c.6334	p.T2112A	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367				53	0	0	36	21	36.8421
CPSF4	0	genome.wustl.edu	37	7	99051685	99051685	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	99051685	99051685	G	A	SNP	CPSF4	ENST00000292476	human	ensembl	74_37	+1	known	missense	c.667	p.G223R	1.000	superfamily_Znf_CCHC	pfam_Znf_CCCH,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCCH,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	CPSF4	HGNC	ENSG00000160917				210	0	0	120	81	40.2985
YWHAZ	0	genome.wustl.edu	37	8	101960825	101960825	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	101960825	101960825	A	G	SNP	YWHAZ	ENST00000353245	human	ensembl	74_37	-1	known	missense	c.293	p.L98P	1.000	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	-	no_errors	YWHAZ	HGNC	ENSG00000164924				204	1	0.487805	212	51	19.3916
FZD6	0	genome.wustl.edu	37	8	104342230	104342230	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	104342230	104342230	G	T	SNP	FZD6	ENST00000358755	human	ensembl	74_37	+1	known	missense	c.1889	p.G630V	0.947	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD6	HGNC	ENSG00000164930				48	0	0	82	26	24.0741
RP1L1	0	genome.wustl.edu	37	8	10470587	10470587	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	10470587	10470587	G	A	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.1021	p.R341W	0.996	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638				105	0	0	271	16	5.57491
DPYS	0	genome.wustl.edu	37	8	105405032	105405032	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	105405032	105405032	G	A	SNP	DPYS	ENST00000351513	human	ensembl	74_37	-1	known	nonsense	c.1423	p.R475*	1.000	superfamily_Metal-dep_hydrolase_composite	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYS	HGNC	ENSG00000147647				159	0	0	164	121	42.4561
SOX7	0	genome.wustl.edu	37	8	10683722	10683722	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	10683722	10683722	T	C	SNP	SOX7	ENST00000553390	human	ensembl	74_37	-1	known	missense	c.334	p.S112G	1.000	superfamily_HMG_box_dom,pfscan_HMG_box_dom	pfam_Sox_C_TAD,pfam_G_patch_dom,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_HMG_box_dom	-	no_errors	SOX7	HGNC	ENSG00000171056				20	0	0	13	9	40.9091
PKHD1L1	0	genome.wustl.edu	37	8	110477051	110477051	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	110477051	110477051	A	G	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.7990	p.N2664D	1.000	superfamily_Pectin_lyase_fold/virulence	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				74	0	0	93	25	21.1864
CSMD3	0	genome.wustl.edu	37	8	113277738	113277738	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	113277738	113277738	T	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.9590	p.Y3197F	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				82	0	0	116	38	24.6753
CSMD3	0	genome.wustl.edu	37	8	113301691	113301691	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	113301691	113301691	A	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.9051	p.V3017	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				55	0	0	77	28	26.6667
CSMD3	0	genome.wustl.edu	37	8	113694730	113694730	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	113694730	113694730	A	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.2618	p.I873N	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				83	0	0	106	17	13.8211
DLC1	0	genome.wustl.edu	37	8	12957761	12957761	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	12957761	12957761	G	A	SNP	DLC1	ENST00000276297	human	ensembl	74_37	-1	known	silent	c.2085	p.S695	0.116	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741				76	0	0	151	40	20.9424
KCNQ3	0	genome.wustl.edu	37	8	133492534	133492534	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	133492534	133492534	C	T	SNP	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	silent	c.246	p.P82	0.999	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156				19	0	0	27	8	22.8571
COL22A1	0	genome.wustl.edu	37	8	139790595	139790595	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	139790595	139790595	C	T	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	splice_site	c.1758+1	e14+1	1.000	-	-	-	no_errors	COL22A1	HGNC	ENSG00000169436				43	0	0	52	16	23.5294
SLC45A4	0	genome.wustl.edu	37	8	142222373	142222373	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	142222373	142222373	C	T	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.2224	p.G742R	0.000	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				26	0	0	49	11	18.3333
SLC45A4	0	genome.wustl.edu	37	8	142228485	142228485	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	142228485	142228485	C	T	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	silent	c.1254	p.A418	0.031	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				51	0	0	117	45	27.7778
LY6D	0	genome.wustl.edu	37	8	143866633	143866633	+	RNA	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	143866633	143866633	A	G	SNP	LY6D	ENST00000518434	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LY6D	HGNC	ENSG00000167656				23	0	0	38	8	17.3913
LY6E	0	genome.wustl.edu	37	8	144102851	144102851	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	144102851	144102851	G	A	SNP	LY6E	ENST00000292494	human	ensembl	74_37	+1	known	splice_site	c.172+1	e2+1	0.982	-	-	-	no_errors	LY6E	HGNC	ENSG00000160932				54	0	0	102	23	18.4
RHPN1	0	genome.wustl.edu	37	8	144464012	144464012	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	144464012	144464012	A	G	SNP	RHPN1	ENST00000289013	human	ensembl	74_37	+1	known	silent	c.1671	p.S557	0.005	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_BRO1_dom,pfam_HR1_rho-bd,pfam_PDZ,superfamily_PDZ,superfamily_HR1_rho-bd,smart_HR1_rho-bd,smart_PDZ,pfscan_BRO1_dom,pfscan_PDZ	-	no_errors	RHPN1	HGNC	ENSG00000158106				21	0	0	43	12	21.8182
PLEC	0	genome.wustl.edu	37	8	144991489	144991489	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	144991489	144991489	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.12911	p.T4304M	1.000	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				69	0	0	135	20	12.9032
PLEC	0	genome.wustl.edu	37	8	144995573	144995573	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	144995573	144995573	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.8827	p.L2943	1.000	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				89	0	0	224	16	6.66667
PLEC	0	genome.wustl.edu	37	8	144996166	144996166	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	144996166	144996166	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.8234	p.A2745V	0.838	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				33	0	0	44	13	22.807
PLEC	0	genome.wustl.edu	37	8	144997128	144997128	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	144997128	144997128	C	T	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.7380	p.T2460	0.009	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				12	0	0	31	8	20.5128
SPATC1	0	genome.wustl.edu	37	8	145094872	145094872	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	145094872	145094872	A	C	SNP	SPATC1	ENST00000377470	human	ensembl	74_37	+1	known	missense	c.274	p.M92L	0.000	NULL	NULL	-	no_errors	SPATC1	HGNC	ENSG00000186583				78	0	0	176	49	21.7778
SLC52A2	0	genome.wustl.edu	37	8	145583901	145583901	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	145583901	145583901	T	C	SNP	SLC52A2	ENST00000329994	human	ensembl	74_37	+1	known	missense	c.749	p.L250P	0.974	NULL	pfam_Endogenous_retrovirus_rcpt	-	no_errors	SLC52A2	HGNC	ENSG00000185803				58	0	0	111	34	23.4483
TONSL	0	genome.wustl.edu	37	8	145657756	145657756	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	145657756	145657756	C	A	SNP	TONSL	ENST00000409379	human	ensembl	74_37	-1	known	missense	c.3647	p.G1216V	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TONSL	HGNC	ENSG00000160949				94	0	0	162	55	25.3456
RECQL4	0	genome.wustl.edu	37	8	145742065	145742065	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	145742065	145742065	C	T	SNP	RECQL4	ENST00000428558	human	ensembl	74_37	-1	known	silent	c.438	p.G146	0.000	NULL	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DNA_rep_checkpnt_protein,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL4	HGNC	ENSG00000160957				31	0	0	32	26	44.8276
LRRC24	0	genome.wustl.edu	37	8	145748716	145748716	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	145748716	145748716	A	G	SNP	LRRC24	ENST00000529415	human	ensembl	74_37	-1	known	missense	c.685	p.S229P	1.000	smart_Cys-rich_flank_reg_C	pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC24	HGNC	ENSG00000254402				18	0	0	31	14	31.1111
ZNF7	0	genome.wustl.edu	37	8	146066746	146066746	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	146066746	146066746	C	T	SNP	ZNF7	ENST00000325241	human	ensembl	74_37	+1	known	missense	c.254	p.T85M	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF7	HGNC	ENSG00000147789				151	0	0	169	50	22.8311
C8orf33	0	genome.wustl.edu	37	8	146278738	146278738	+	Silent	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	146278738	146278738	C	A	SNP	C8orf33	ENST00000331434	human	ensembl	74_37	+1	known	silent	c.459	p.P153	0.947	NULL	NULL	-	no_errors	C8orf33	HGNC	ENSG00000182307				65	0	0	131	50	27.6243
SLC7A2	0	genome.wustl.edu	37	8	17417858	17417858	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	17417858	17417858	C	T	SNP	SLC7A2	ENST00000004531	human	ensembl	74_37	+1	known	silent	c.1440	p.Y480	0.816	tigrfam_Cat_AA_permease	pfam_AA-permease/SLC12A_dom,tigrfam_Cat_AA_permease	-	no_errors	SLC7A2	HGNC	ENSG00000003989				56	0	0	65	17	20.7317
NAT2	0	genome.wustl.edu	37	8	18257855	18257855	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	18257855	18257855	T	C	SNP	NAT2	ENST00000286479	human	ensembl	74_37	+1	known	silent	c.342	p.I114	0.408	pfam_Arylamine_N-AcTrfase,prints_Arylamine_N-AcTrfase	pfam_Arylamine_N-AcTrfase,prints_Arylamine_N-AcTrfase	-	no_errors	NAT2	HGNC	ENSG00000156006				91	0	0	120	40	25
NPM2	0	genome.wustl.edu	37	8	21883281	21883281	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	21883281	21883281	A	G	SNP	NPM2	ENST00000397940	human	ensembl	74_37	+1	known	missense	c.268	p.M90V	1.000	superfamily_Nucleoplasmin_core_dom	superfamily_Nucleoplasmin_core_dom	-	no_errors	NPM2	HGNC	ENSG00000158806				126	0	0	295	79	21.123
TNFRSF10C	0	genome.wustl.edu	37	8	22974326	22974326	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	22974326	22974326	G	T	SNP	TNFRSF10C	ENST00000356864	human	ensembl	74_37	+1	known	missense	c.562	p.G188W	0.976	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_10	-	no_errors	TNFRSF10C	HGNC	ENSG00000173535				123	0	0	188	45	19.3133
STC1	0	genome.wustl.edu	37	8	23709860	23709860	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	23709860	23709860	G	A	SNP	STC1	ENST00000290271	human	ensembl	74_37	-1	known	silent	c.156	p.V52	0.994	pfam_Stanniocalcin	pfam_Stanniocalcin	-	no_errors	STC1	HGNC	ENSG00000159167				61	0	0	82	23	21.9048
EXTL3	0	genome.wustl.edu	37	8	28574480	28574480	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	28574480	28574480	A	G	SNP	EXTL3	ENST00000220562	human	ensembl	74_37	+1	known	missense	c.904	p.T302A	1.000	pfam_Exostosin	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXTL3	HGNC	ENSG00000012232				56	0	0	74	21	22.1053
HMBOX1	0	genome.wustl.edu	37	8	28906577	28906577	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	28906577	28906577	C	T	SNP	HMBOX1	ENST00000523613	human	ensembl	74_37	+1	putative	silent	c.1137	p.C379	0.000	NULL	pfam_HNF-1_N,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HMBOX1	HGNC	ENSG00000147421				88	0	0	143	39	21.4286
CSMD1	0	genome.wustl.edu	37	8	3141799	3141799	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	3141799	3141799	G	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.4023	p.D1341E	0.988	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				28	0	0	46	15	24.5902
NRG1	0	genome.wustl.edu	37	8	32621538	32621538	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	32621538	32621538	C	T	SNP	NRG1	ENST00000338921	human	ensembl	74_37	+1	known	missense	c.1565	p.A522V	0.973	pfam_Neuregulin_1_C	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Ig-like_dom,prints_Neuregulin	-	no_errors	NRG1	HGNC	ENSG00000157168				52	0	0	69	21	23.3333
MAK16	0	genome.wustl.edu	37	8	33346315	33346315	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	33346315	33346315	G	A	SNP	MAK16	ENST00000360128	human	ensembl	74_37	+1	known	missense	c.239	p.R80Q	1.000	pirsf_Mak16	pfam_Mak16,pirsf_Mak16	-	no_errors	MAK16	HGNC	ENSG00000198042				47	0	0	38	13	25.4902
BAG4	0	genome.wustl.edu	37	8	38034594	38034594	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	38034594	38034594	C	T	SNP	BAG4	ENST00000287322	human	ensembl	74_37	+1	known	silent	c.207	p.G69	0.958	NULL	pfam_BAG_domain,smart_BAG_domain,pfscan_BAG_domain	-	no_errors	BAG4	HGNC	ENSG00000156735				18	0	0	27	22	44.898
ADAM9	0	genome.wustl.edu	37	8	38873652	38873652	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	38873652	38873652	C	T	SNP	ADAM9	ENST00000487273	human	ensembl	74_37	+1	known	missense	c.349	p.R117W	1.000	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM9	HGNC	ENSG00000168615				90	0	0	98	25	20.3252
FBXO25	0	genome.wustl.edu	37	8	413102	413102	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	413102	413102	C	T	SNP	FBXO25	ENST00000276326	human	ensembl	74_37	+1	known	silent	c.939	p.Y313	0.972	superfamily_F-box_dom	superfamily_F-box_dom	-	no_errors	FBXO25	HGNC	ENSG00000147364				99	0	0	122	25	17.0068
KAT6A	0	genome.wustl.edu	37	8	41794882	41794882	+	Silent	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	41794882	41794882	T	G	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	silent	c.3244	p.R1082	0.998	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168				72	0	0	94	28	22.9508
AP3M2	0	genome.wustl.edu	37	8	42012282	42012282	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	42012282	42012282	G	A	SNP	AP3M2	ENST00000174653	human	ensembl	74_37	+1	known	missense	c.77	p.R26H	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_Clathrin_mu,prints_Clathrin_mu	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP3M2	HGNC	ENSG00000070718				75	0	0	64	17	20.9877
SOX17	0	genome.wustl.edu	37	8	55371735	55371735	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	55371735	55371735	G	A	SNP	SOX17	ENST00000297316	human	ensembl	74_37	+1	known	missense	c.425	p.R142H	1.000	NULL	pfam_Sox_C_TAD,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX17	HGNC	ENSG00000164736				18	0	0	36	5	12.1951
NSMAF	0	genome.wustl.edu	37	8	59510450	59510450	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	59510450	59510450	G	T	SNP	NSMAF	ENST00000427130	human	ensembl	74_37	-1	known	missense	c.1690	p.L564M	0.948	pfam_BEACH_dom,superfamily_BEACH_dom,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_WD40_repeat,pfam_GRAM,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,smart_GRAM,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NSMAF	HGNC	ENSG00000035681				106	0	0	107	28	20.7407
TOX	0	genome.wustl.edu	37	8	59764296	59764296	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	59764296	59764296	T	C	SNP	TOX	ENST00000361421	human	ensembl	74_37	-1	known	silent	c.480	p.P160	0.016	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TOX	HGNC	ENSG00000198846				65	0	0	105	30	22.2222
ERICH1	0	genome.wustl.edu	37	8	623906	623906	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	623906	623906	C	T	SNP	ERICH1	ENST00000262109	human	ensembl	74_37	-1	known	missense	c.446	p.R149Q	0.188	NULL	NULL	-	no_errors	ERICH1	HGNC	ENSG00000104714				59	0	0	108	27	20
SULF1	0	genome.wustl.edu	37	8	70488321	70488321	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	70488321	70488321	G	A	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.289	p.G97R	1.000	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573				53	0	0	53	12	18.4615
ZFHX4	0	genome.wustl.edu	37	8	77766597	77766597	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	77766597	77766597	G	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	silent	c.7440	p.T2480	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				58	0	0	93	33	26.1905
ZNF704	0	genome.wustl.edu	37	8	81553607	81553607	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	81553607	81553607	G	A	SNP	ZNF704	ENST00000327835	human	ensembl	74_37	-1	known	silent	c.1233	p.L411	0.123	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF704	HGNC	ENSG00000164684				24	0	0	30	9	23.0769
SGK223	0	genome.wustl.edu	37	8	8233764	8233764	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	8233764	8233764	G	A	SNP	SGK223	ENST00000330777	human	ensembl	74_37	-1	known	missense	c.2155	p.R719W	0.081	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	SGK223	Uniprot_gn	ENSG00000182319				79	0	0	128	39	23.3533
PSKH2	0	genome.wustl.edu	37	8	87060713	87060713	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	87060713	87060713	G	A	SNP	PSKH2	ENST00000276616	human	ensembl	74_37	-1	known	missense	c.1136	p.S379L	0.724	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PSKH2	HGNC	ENSG00000147613				91	0	0	140	23	14.1104
PSKH2	0	genome.wustl.edu	37	8	87076599	87076599	+	Silent	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	87076599	87076599	G	T	SNP	PSKH2	ENST00000276616	human	ensembl	74_37	-1	known	silent	c.447	p.L149	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PSKH2	HGNC	ENSG00000147613				68	0	0	97	27	21.7742
RBM12B	0	genome.wustl.edu	37	8	94745759	94745759	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	94745759	94745759	A	G	SNP	RBM12B	ENST00000399300	human	ensembl	74_37	-1	known	silent	c.2880	p.N960	0.988	smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM12B	HGNC	ENSG00000183808				53	0	0	51	16	23.8806
CCDC180	0	genome.wustl.edu	37	9	100070318	100070318	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	100070318	100070318	C	T	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	silent	c.105	p.P35	0.001	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816				54	0	0	48	24	33.3333
CCDC180	0	genome.wustl.edu	37	9	100092974	100092974	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	100092974	100092974	G	T	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	missense	c.2331	p.E777D	0.000	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816				28	0	0	24	4	14.2857
TDRD7	0	genome.wustl.edu	37	9	100227190	100227190	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	100227190	100227190	T	C	SNP	TDRD7	ENST00000355295	human	ensembl	74_37	+1	known	silent	c.1509	p.S503	1.000	pfam_Tudor	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD7	HGNC	ENSG00000196116				63	0	0	38	25	39.6825
ZNF462	0	genome.wustl.edu	37	9	109690562	109690562	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	109690562	109690562	C	T	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	nonsense	c.4369	p.Q1457*	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				34	0	0	10	7	41.1765
MUSK	0	genome.wustl.edu	37	9	113547894	113547894	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	113547894	113547894	G	A	SNP	MUSK	ENST00000374448	human	ensembl	74_37	+1	known	silent	c.1674	p.P558	0.993	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Frizzled_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MUSK	HGNC	ENSG00000030304				175	0	0	87	49	36.0294
FOXD4	0	genome.wustl.edu	37	9	117504	117504	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	117504	117504	T	C	SNP	FOXD4	ENST00000382500	human	ensembl	74_37	-1	known	missense	c.616	p.T206A	0.439	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD4	HGNC	ENSG00000170122				218	1	0.456621	275	130	32.0988
TLR4	0	genome.wustl.edu	37	9	120466714	120466714	+	RNA	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	120466714	120466714	C	A	SNP	TLR4	ENST00000472304	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TLR4	HGNC	ENSG00000136869				29	0	0	23	14	37.8378
OLFML2A	0	genome.wustl.edu	37	9	127570085	127570085	+	Silent	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	127570085	127570085	C	A	SNP	OLFML2A	ENST00000373580	human	ensembl	74_37	+1	known	silent	c.1194	p.T398	0.929	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2A	HGNC	ENSG00000185585				28	0	0	13	17	56.6667
LAMC3	0	genome.wustl.edu	37	9	133928328	133928328	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	133928328	133928328	G	A	SNP	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	missense	c.1915	p.V639I	0.000	pfam_Laminin_B_type_IV,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555				24	0	0	24	21	46.6667
AK8	0	genome.wustl.edu	37	9	135750575	135750575	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	135750575	135750575	C	G	SNP	AK8	ENST00000298545	human	ensembl	74_37	-1	known	missense	c.96	p.E32D	1.000	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	pfam_Adenylate_kin,superfamily_P-loop_NTPase,superfamily_Adenylate_kinase_lid-dom,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,prints_Adenylate_kin	-	no_errors	AK8	HGNC	ENSG00000165695				26	0	0	15	11	42.3077
RALGDS	0	genome.wustl.edu	37	9	136037753	136037753	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	136037753	136037753	G	A	SNP	RALGDS	ENST00000542690	human	ensembl	74_37	-1	known	missense	c.47	p.A16V	0.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RALGDS	HGNC	ENSG00000160271				14	0	0	9	5	35.7143
ADAMTS13	0	genome.wustl.edu	37	9	136279675	136279675	+	RNA	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	136279675	136279675	A	G	SNP	ADAMTS13	ENST00000485925	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	ADAMTS13	HGNC	ENSG00000160323				29	0	0	17	13	43.3333
SNAPC4	0	genome.wustl.edu	37	9	139272401	139272401	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	139272401	139272401	C	T	SNP	SNAPC4	ENST00000298532	human	ensembl	74_37	-1	known	missense	c.3878	p.R1293H	0.001	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC	ENSG00000165684				21	0	0	23	13	36.1111
NOTCH1	0	genome.wustl.edu	37	9	139418408	139418408	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	139418408	139418408	G	A	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	missense	c.164	p.P55L	0.997	smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400				10	0	0	4	3	42.8571
ABCA2	0	genome.wustl.edu	37	9	139908775	139908775	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	139908775	139908775	C	T	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	missense	c.4085	p.R1362Q	0.014	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC	ENSG00000107331				17	0	0	10	4	28.5714
ENTPD2	0	genome.wustl.edu	37	9	139943197	139943197	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	139943197	139943197	A	G	SNP	ENTPD2	ENST00000355097	human	ensembl	74_37	-1	known	missense	c.1400	p.L467P	0.000	NULL	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD2	HGNC	ENSG00000054179				16	0	0	5	7	58.3333
TPRN	0	genome.wustl.edu	37	9	140086686	140086686	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	140086686	140086686	A	G	SNP	TPRN	ENST00000321773	human	ensembl	74_37	-1	known	missense	c.1915	p.W639R	0.478	NULL	NULL	-	no_errors	TPRN	HGNC	ENSG00000176058				75	0	0	67	31	31.6327
NOXA1	0	genome.wustl.edu	37	9	140325259	140325259	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	140325259	140325259	C	T	SNP	NOXA1	ENST00000341349	human	ensembl	74_37	+1	known	silent	c.636	p.D212	0.000	NULL	pfam_OPR_PB1,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_TPR_repeat,smart_OPR_PB1,smart_SH3_domain,pfscan_SH3_domain,pfscan_TPR-contain_dom	-	no_errors	NOXA1	HGNC	ENSG00000188747				20	0	0	19	4	17.3913
PLIN2	0	genome.wustl.edu	37	9	19116373	19116373	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	19116373	19116373	G	A	SNP	PLIN2	ENST00000276914	human	ensembl	74_37	-1	known	missense	c.1187	p.T396M	1.000	pfam_Perilipin,pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN2	HGNC	ENSG00000147872				65	0	0	28	28	50
TEK	0	genome.wustl.edu	37	9	27228229	27228229	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	27228229	27228229	C	T	SNP	TEK	ENST00000380036	human	ensembl	74_37	+1	known	missense	c.3226	p.R1076W	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tyr_kin_Tie2_Ig-like_dom-1_N,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TEK	HGNC	ENSG00000120156				84	0	0	55	29	34.5238
NOL6	0	genome.wustl.edu	37	9	33465880	33465880	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	33465880	33465880	G	A	SNP	NOL6	ENST00000297990	human	ensembl	74_37	-1	known	missense	c.2380	p.R794W	1.000	pfam_Nrap	pfam_Nrap	-	no_errors	NOL6	HGNC	ENSG00000165271				46	0	0	25	16	39.0244
PTENP1	0	genome.wustl.edu	37	9	33675379	33675379	+	RNA	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	33675379	33675379	C	A	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984				36	0	0	11	4	26.6667
PTENP1	0	genome.wustl.edu	37	9	33675400	33675400	+	RNA	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	33675400	33675400	G	A	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984				48	0	0	16	4	20
CNTFR	0	genome.wustl.edu	37	9	34552676	34552676	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	34552676	34552676	A	G	SNP	CNTFR	ENST00000351266	human	ensembl	74_37	-1	known	silent	c.945	p.A315	0.980	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTFR	HGNC	ENSG00000122756				30	0	0	33	7	17.5
ARID3C	0	genome.wustl.edu	37	9	34623868	34623868	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	34623868	34623868	G	A	SNP	ARID3C	ENST00000378909	human	ensembl	74_37	-1	known	missense	c.568	p.R190C	1.000	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3C	HGNC	ENSG00000205143				11	0	0	10	6	37.5
UNC13B	0	genome.wustl.edu	37	9	35399003	35399003	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	35399003	35399003	C	T	SNP	UNC13B	ENST00000378496	human	ensembl	74_37	+1	known	missense	c.3799	p.R1267W	1.000	pfam_Munc13_subgr_dom-2	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13B	HGNC	ENSG00000198722				56	0	0	22	28	56
TESK1	0	genome.wustl.edu	37	9	35605979	35605979	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	35605979	35605979	A	G	SNP	TESK1	ENST00000336395	human	ensembl	74_37	+1	known	splice_site	c.220-2	e2-2	1.000	-	-	-	no_errors	TESK1	HGNC	ENSG00000107140				44	0	0	28	23	45.098
SPAG8	0	genome.wustl.edu	37	9	35809872	35809872	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	35809872	35809872	C	T	SNP	SPAG8	ENST00000479751	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPAG8	HGNC	ENSG00000137098				102	0	0	70	42	37.5
RECK	0	genome.wustl.edu	37	9	36118778	36118778	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	36118778	36118778	G	A	SNP	RECK	ENST00000377966	human	ensembl	74_37	+1	known	missense	c.2278	p.V760I	0.423	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,superfamily_Prot_inh_PMP,smart_Kazal_dom	-	no_errors	RECK	HGNC	ENSG00000122707				48	0	0	26	16	38.0952
ZBTB5	0	genome.wustl.edu	37	9	37440993	37440993	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	37440993	37440993	C	A	SNP	ZBTB5	ENST00000307750	human	ensembl	74_37	-1	known	missense	c.1556	p.R519M	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB5	HGNC	ENSG00000168795				30	0	0	28	15	34.8837
SPATA31A6	0	genome.wustl.edu	37	9	43626997	43626997	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	43626997	43626997	C	T	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	missense	c.1690	p.V564I	0.000	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775				189	0	0	56	51	47.6636
PPAPDC2	0	genome.wustl.edu	37	9	4662738	4662738	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	4662738	4662738	G	A	SNP	PPAPDC2	ENST00000381883	human	ensembl	74_37	+1	known	silent	c.363	p.A121	0.715	superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAPDC2	HGNC	ENSG00000205808				32	0	0	36	15	29.4118
KIAA2026	0	genome.wustl.edu	37	9	5920290	5920290	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	5920290	5920290	T	G	SNP	KIAA2026	ENST00000399933	human	ensembl	74_37	-1	novel	missense	c.5706	p.Q1902H	1.000	NULL	superfamily_Bromodomain	-	no_errors	KIAA2026	HGNC	ENSG00000183354				136	0	0	72	58	44.6154
PGM5	0	genome.wustl.edu	37	9	70993145	70993145	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	70993145	70993145	A	G	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	missense	c.292	p.I98V	1.000	pfam_A-D-PHexomutase_a/b/a-I,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330				42	0	0	67	4	5.6338
DAPK1	0	genome.wustl.edu	37	9	90254270	90254270	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	90254270	90254270	C	A	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	missense	c.425	p.P142H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730				72	0	0	31	16	34.0426
ARMCX1	0	genome.wustl.edu	37	X	100808097	100808097	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	100808097	100808097	G	A	SNP	ARMCX1	ENST00000372829	human	ensembl	74_37	+1	known	missense	c.184	p.A62T	0.000	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMCX1	HGNC	ENSG00000126947				35	0	0	31	10	24.3902
BEX2	0	genome.wustl.edu	37	X	102564886	102564886	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	102564886	102564886	G	A	SNP	BEX2	ENST00000536889	human	ensembl	74_37	-1	known	nonsense	c.115	p.R39*	0.135	NULL	pfam_TF_A-like/BEX-like	-	no_errors	BEX2	HGNC	ENSG00000133134				59	0	0	29	29	50
COL4A6	0	genome.wustl.edu	37	X	107406166	107406166	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	107406166	107406166	C	T	SNP	COL4A6	ENST00000372216	human	ensembl	74_37	-1	known	missense	c.4175	p.G1392D	0.998	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A6	HGNC	ENSG00000197565				207	0	0	151	95	38.6179
CHRDL1	0	genome.wustl.edu	37	X	109937511	109937511	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	109937511	109937511	C	T	SNP	CHRDL1	ENST00000372042	human	ensembl	74_37	-1	known	missense	c.658	p.A220T	1.000	NULL	pfam_VWF_C,smart_VWF_C,pfscan_VWF_C	-	no_errors	CHRDL1	HGNC	ENSG00000101938				104	0	0	82	44	34.9206
AMOT	0	genome.wustl.edu	37	X	112033859	112033859	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	112033859	112033859	T	G	SNP	AMOT	ENST00000371959	human	ensembl	74_37	-1	known	missense	c.2078	p.H693P	1.000	pfam_Angiomotin_C,prints_Angiomotin	pfam_Angiomotin_C,superfamily_Prefoldin,prints_Angiomotin	-	no_errors	AMOT	HGNC	ENSG00000126016				258	0	0	149	130	46.595
DOCK11	0	genome.wustl.edu	37	X	117764371	117764371	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	117764371	117764371	A	G	SNP	DOCK11	ENST00000276202	human	ensembl	74_37	+1	known	silent	c.3804	p.V1268	0.768	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251				187	0	0	90	66	42.3077
LONRF3	0	genome.wustl.edu	37	X	118108785	118108785	+	Silent	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	118108785	118108785	T	C	SNP	LONRF3	ENST00000371628	human	ensembl	74_37	+1	known	silent	c.42	p.A14	0.031	NULL	pfam_Pept_S16_N,pfam_Znf_C3HC4_RING-type,superfamily_PUA-like_domain,smart_TPR_repeat,smart_Znf_RING,smart_Pept_S16_N,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	LONRF3	HGNC	ENSG00000175556				16	0	0	28	4	12.5
CXorf56	0	genome.wustl.edu	37	X	118676632	118676632	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	118676632	118676632	C	T	SNP	CXorf56	ENST00000469448	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CXorf56	HGNC	ENSG00000018610				52	0	0	30	11	26.8293
SLC25A14	0	genome.wustl.edu	37	X	129505599	129505599	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	129505599	129505599	T	C	SNP	SLC25A14	ENST00000339231	human	ensembl	74_37	+1	known	missense	c.1001	p.L334P	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A14	HGNC	ENSG00000102078				110	0	0	63	42	40
ZNF75D	0	genome.wustl.edu	37	X	134425380	134425380	+	RNA	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	134425380	134425380	C	T	SNP	ZNF75D	ENST00000469456	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF75D	HGNC	ENSG00000186376				35	0	0	21	12	36.3636
SAGE1	0	genome.wustl.edu	37	X	134995056	134995056	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	134995056	134995056	A	G	SNP	SAGE1	ENST00000324447	human	ensembl	74_37	+1	known	silent	c.2715	p.*905	0.046	NULL	NULL	-	no_errors	SAGE1	HGNC	ENSG00000181433				17	0	0	15	5	25
CSF2RA	0	genome.wustl.edu	37	X	1409308	1409308	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	1409308	1409308	A	G	SNP	CSF2RA	ENST00000417535	human	ensembl	74_37	+1	known	silent	c.552	p.S184	0.001	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	CSF2RA	HGNC	ENSG00000198223				209	0	0	102	70	40.6977
CXorf40B	0	genome.wustl.edu	37	X	149102068	149102068	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	149102068	149102068	G	A	SNP	CXorf40B	ENST00000355203	human	ensembl	74_37	-1	known	missense	c.25	p.R9W	1.000	superfamily_PUA-like_domain	superfamily_PUA-like_domain	-	no_errors	CXorf40B	HGNC	ENSG00000197021				73	0	0	49	24	32.8767
VMA21	0	genome.wustl.edu	37	X	150573447	150573447	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	150573447	150573447	G	A	SNP	VMA21	ENST00000370361	human	ensembl	74_37	+1	known	missense	c.388	p.A130T	1.000	pfam_VMA21-like_domain	pfam_VMA21-like_domain	-	no_errors	VMA21	HGNC	ENSG00000160131				85	0	0	54	39	41.9355
HCFC1	0	genome.wustl.edu	37	X	153219914	153219914	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	153219914	153219914	G	A	SNP	HCFC1	ENST00000310441	human	ensembl	74_37	-1	known	silent	c.3936	p.S1312	0.000	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534				204	0	0	170	127	42.7609
FLNA	0	genome.wustl.edu	37	X	153594462	153594462	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	153594462	153594462	G	A	SNP	FLNA	ENST00000369850	human	ensembl	74_37	-1	known	silent	c.1359	p.V453	0.367	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924				60	0	0	56	44	44
PLXNA3	0	genome.wustl.edu	37	X	153689684	153689684	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	153689684	153689684	C	T	SNP	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	silent	c.840	p.I280	0.864	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827				116	0	0	105	61	36.747
PHEX	0	genome.wustl.edu	37	X	22095682	22095682	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	22095682	22095682	C	T	SNP	PHEX	ENST00000379374	human	ensembl	74_37	+1	known	silent	c.525	p.G175	0.755	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	PHEX	HGNC	ENSG00000102174				214	0	0	140	98	41.1765
PHEX	0	genome.wustl.edu	37	X	22129611	22129611	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	22129611	22129611	G	T	SNP	PHEX	ENST00000379374	human	ensembl	74_37	+1	known	missense	c.1106	p.R369I	1.000	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	PHEX	HGNC	ENSG00000102174				200	0	0	87	67	43.5065
PTCHD1	0	genome.wustl.edu	37	X	23411237	23411237	+	Silent	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	23411237	23411237	C	T	SNP	PTCHD1	ENST00000379361	human	ensembl	74_37	+1	known	silent	c.1602	p.T534	0.950	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD1	HGNC	ENSG00000165186				102	0	0	80	48	37.5
ZBED1	0	genome.wustl.edu	37	X	2406990	2406990	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	2406990	2406990	A	G	SNP	ZBED1	ENST00000381218	human	ensembl	74_37	-1	known	missense	c.1771	p.W591R	1.000	pfam_HATC_dom_C,superfamily_RNaseH-like_dom	pfam_HATC_dom_C,pfam_Znf_BED_prd,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED1	HGNC	ENSG00000214717				120	0	0	112	74	39.7849
ZBED1	0	genome.wustl.edu	37	X	2408297	2408297	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	2408297	2408297	G	A	SNP	ZBED1	ENST00000381218	human	ensembl	74_37	-1	known	missense	c.464	p.T155M	0.500	NULL	pfam_HATC_dom_C,pfam_Znf_BED_prd,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED1	HGNC	ENSG00000214717				98	0	0	104	81	43.7838
MAGEB6	0	genome.wustl.edu	37	X	26212996	26212996	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	26212996	26212996	C	T	SNP	MAGEB6	ENST00000379034	human	ensembl	74_37	+1	known	missense	c.1033	p.R345W	0.004	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB6	HGNC	ENSG00000176746				145	0	0	87	54	38.2979
MED14	0	genome.wustl.edu	37	X	40542144	40542144	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	40542144	40542144	A	G	SNP	MED14	ENST00000324817	human	ensembl	74_37	-1	known	missense	c.2162	p.V721A	1.000	NULL	pfam_Mediator_Med14	-	no_errors	MED14	HGNC	ENSG00000180182				102	0	0	44	22	33.3333
NYX	0	genome.wustl.edu	37	X	41333037	41333037	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	41333037	41333037	C	T	SNP	NYX	ENST00000342595	human	ensembl	74_37	+1	known	missense	c.331	p.R111C	0.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	NYX	HGNC	ENSG00000188937				13	0	0	14	11	44
EFHC2	0	genome.wustl.edu	37	X	44035573	44035573	+	Silent	SNP	A	A	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	44035573	44035573	A	C	SNP	EFHC2	ENST00000420999	human	ensembl	74_37	-1	known	silent	c.2007	p.P669	0.202	NULL	pfam_DUF1126,smart_Uncharacterised_DM10,pfscan_EF_hand_dom	-	no_errors	EFHC2	HGNC	ENSG00000183690				13	0	0	3	5	62.5
CXorf36	0	genome.wustl.edu	37	X	45051247	45051247	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	45051247	45051247	G	A	SNP	CXorf36	ENST00000398000	human	ensembl	74_37	-1	known	silent	c.247	p.L83	0.997	NULL	NULL	-	no_errors	CXorf36	HGNC	ENSG00000147113				30	0	0	14	3	17.6471
HDAC6	0	genome.wustl.edu	37	X	48673431	48673431	+	Silent	SNP	A	A	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	48673431	48673431	A	G	SNP	HDAC6	ENST00000444343	human	ensembl	74_37	+1	known	silent	c.1164	p.A388	0.344	pfam_His_deacetylse_dom	pfam_His_deacetylse_dom,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,prints_His_deacetylse	-	no_errors	HDAC6	HGNC	ENSG00000094631				15	0	0	7	7	50
KCND1	0	genome.wustl.edu	37	X	48826286	48826286	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	48826286	48826286	G	A	SNP	KCND1	ENST00000218176	human	ensembl	74_37	-1	known	silent	c.393	p.C131	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND1	HGNC	ENSG00000102057				24	0	0	13	12	48
FOXP3	0	genome.wustl.edu	37	X	49107881	49107881	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	49107881	49107881	C	T	SNP	FOXP3	ENST00000376207	human	ensembl	74_37	-1	known	missense	c.1210	p.A404T	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP3	HGNC	ENSG00000049768				29	0	0	22	10	31.25
SMC1A	0	genome.wustl.edu	37	X	53410093	53410093	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	53410093	53410093	G	A	SNP	SMC1A	ENST00000322213	human	ensembl	74_37	-1	known	missense	c.3055	p.R1019C	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge,prints_Tropomyosin	-	no_errors	SMC1A	HGNC	ENSG00000072501				19	0	0	5	8	61.5385
ITIH6	0	genome.wustl.edu	37	X	54776525	54776525	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	54776525	54776525	C	T	SNP	ITIH6	ENST00000218436	human	ensembl	74_37	-1	known	missense	c.3745	p.A1249T	0.010	pfam_ITI_HC_C	pfam_VIT,pfam_ITI_HC_C,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH6	HGNC	ENSG00000102313				29	0	0	18	14	43.75
ZXDA	0	genome.wustl.edu	37	X	57936383	57936383	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	57936383	57936383	C	T	SNP	ZXDA	ENST00000358697	human	ensembl	74_37	-1	known	missense	c.472	p.A158T	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDA	HGNC	ENSG00000198205				9	0	0	12	7	36.8421
AR	0	genome.wustl.edu	37	X	66765161	66765161	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	66765161	66765161	A	T	SNP	AR	ENST00000374690	human	ensembl	74_37	+1	known	missense	c.173	p.Q58L	0.920	pfam_Andrgn_rcpt	pfam_Andrgn_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Andrgn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	AR	HGNC	ENSG00000169083				31	0	0	28	12	30
STARD8	0	genome.wustl.edu	37	X	67940212	67940212	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	67940212	67940212	C	T	SNP	STARD8	ENST00000374599	human	ensembl	74_37	+1	known	missense	c.1996	p.P666S	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	STARD8	HGNC	ENSG00000130052				23	0	0	15	14	48.2759
DGAT2L6	0	genome.wustl.edu	37	X	69420151	69420151	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	69420151	69420151	C	T	SNP	DGAT2L6	ENST00000333026	human	ensembl	74_37	+1	known	missense	c.314	p.A105V	0.881	pfam_DAGAT	pfam_DAGAT	-	no_errors	DGAT2L6	HGNC	ENSG00000184210				62	0	0	30	20	40
TGIF2LX	0	genome.wustl.edu	37	X	89177504	89177504	+	Silent	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	89177504	89177504	G	A	SNP	TGIF2LX	ENST00000283891	human	ensembl	74_37	+1	known	silent	c.420	p.A140	0.000	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TGIF2LX	HGNC	ENSG00000153779				75	0	0	104	12	10.3448
SYTL4	0	genome.wustl.edu	37	X	99936233	99936233	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	99936233	99936233	G	A	SNP	SYTL4	ENST00000454200	human	ensembl	74_37	-1	known	missense	c.1555	p.R519W	0.997	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ,prints_Synaptotagmin	-	no_errors	SYTL4	HGNC	ENSG00000102362				46	0	0	19	8	29.6296
ENSG00000269175	0	genome.wustl.edu	37	1	101456193	101456193	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	101456193	101456193	A	-	DEL	ENSG00000269175	ENST00000593496	human	ensembl	74_37	+1	known	frame_shift_del	c.187	p.R66fs	0.002	NULL	NULL	-	no_errors	AC093157.1	Clone_based_ensembl_gene	ENSG00000269175				39	0	0	23	14	37.8378
KCNC4	0	genome.wustl.edu	37	1	110754518	110754519	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	110754518	110754519	-	G	INS	KCNC4	ENST00000369787	human	ensembl	74_37	+1	known	frame_shift_ins	c.397_398	p.I135fs	1.000:1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv9	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_K_chnl_volt-dep_Kv3_ID,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.4,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC4	HGNC	ENSG00000116396				38	0	0	55	22	28.5714
MAGI3	0	genome.wustl.edu	37	1	114185046	114185046	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	114185046	114185046	A	-	DEL	MAGI3	ENST00000369611	human	ensembl	74_37	+1	known	frame_shift_del	c.1874	p.N626fs	1.000	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI3	HGNC	ENSG00000081026				74	0	0	24	10	29.4118
SYCP1	0	genome.wustl.edu	37	1	115537601	115537601	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	115537601	115537601	A	-	DEL	SYCP1	ENST00000369518	human	ensembl	74_37	+1	known	frame_shift_del	c.2892	p.K967fs	1.000	NULL	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765				47	0	0	32	12	27.2727
BCL9	0	genome.wustl.edu	37	1	147091501	147091501	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	147091501	147091501	C	-	DEL	BCL9	ENST00000234739	human	ensembl	74_37	+1	known	frame_shift_del	c.1540	p.P516fs	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128				133	0	0	110	54	32.9268
MTMR11	0	genome.wustl.edu	37	1	149900986	149900989	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	149900986	149900989	AAAA	-	DEL	MTMR11	ENST00000466496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.002:0.003:0.001	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				54	0	0	33	13	28.2609
RPRD2	0	genome.wustl.edu	37	1	150418791	150418791	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	150418791	150418791	A	-	DEL	RPRD2	ENST00000369068	human	ensembl	74_37	+1	known	frame_shift_del	c.784	p.N263fs	1.000	NULL	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,superfamily_Ricin_B_lectin,smart_CID_dom	-	no_errors	RPRD2	HGNC	ENSG00000163125				48	0	0	20	15	42.8571
HORMAD1	0	genome.wustl.edu	37	1	150686529	150686529	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	150686529	150686529	A	-	DEL	HORMAD1	ENST00000476530	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.036	-	-	-	no_errors	HORMAD1	HGNC	ENSG00000143452				59	0	0	19	10	34.4828
S100A4	0	genome.wustl.edu	37	1	153516163	153516163	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	153516163	153516163	A	-	DEL	S100A4	ENST00000468373	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	S100A4	HGNC	ENSG00000196154				104	1	0.952381	74	46	38.3333
RHBG	0	genome.wustl.edu	37	1	156354347	156354348	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	156354347	156354348	-	C	INS	RHBG	ENST00000400992	human	ensembl	74_37	+1	known	frame_shift_ins	c.1168_1169	p.R393fs	0.006:0.723	superfamily_NH4_transpt_AmtB-like_dom	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHBG	HGNC	ENSG00000132677				60	0	0	75	24	24.2424
IGSF9	0	genome.wustl.edu	37	1	159900598	159900599	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	159900598	159900599	-	C	INS	IGSF9	ENST00000368094	human	ensembl	74_37	-1	known	frame_shift_ins	c.1697_1696	p.A566fs	0.926:0.921	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9	HGNC	ENSG00000085552				33	0	0	19	14	42.4242
IGSF8	0	genome.wustl.edu	37	1	160063813	160063814	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	160063813	160063814	GT	-	DEL	IGSF8	ENST00000314485	human	ensembl	74_37	-1	known	frame_shift_del	c.591_590	p.H197fs	1.000:1.000	smart_Ig_sub	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	IGSF8	HGNC	ENSG00000162729				67	0	0	67	23	25.5556
DEDD	0	genome.wustl.edu	37	1	161091815	161091818	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	161091815	161091818	AAAA	-	DEL	DEDD	ENST00000486041	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000:1.000:1.000	-	-	-	no_errors	DEDD	HGNC	ENSG00000158796				49	0	0	19	14	42.4242
FCRLA	0	genome.wustl.edu	37	1	161680414	161680414	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	161680414	161680414	A	-	DEL	FCRLA	ENST00000470841	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FCRLA	HGNC	ENSG00000132185				8	0	0	0	6	100
C1orf112	0	genome.wustl.edu	37	1	169822808	169822809	+	RNA	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	169822808	169822809	-	A	INS	C1orf112	ENST00000459772	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	C1orf112	HGNC	ENSG00000000460				112	0	0	65	27	29.3478
GORAB	0	genome.wustl.edu	37	1	170508756	170508756	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	170508756	170508756	T	-	DEL	GORAB	ENST00000465717	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GORAB	HGNC	ENSG00000120370				31	0	0	14	11	44
PAPPA2	0	genome.wustl.edu	37	1	176762724	176762724	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	176762724	176762724	C	-	DEL	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	frame_shift_del	c.5049	p.S1686fs	0.506	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183				88	0	0	30	18	37.5
CACNA1E	0	genome.wustl.edu	37	1	181767673	181767673	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	181767673	181767673	C	-	DEL	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	frame_shift_del	c.6645	p.Q2217fs	0.001	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216				40	0	0	46	13	22.0339
TPR	0	genome.wustl.edu	37	1	186291529	186291530	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	186291529	186291530	-	A	INS	TPR	ENST00000367478	human	ensembl	74_37	-1	known	frame_shift_ins	c.6382_6381	p.D2127fs	1.000:1.000	NULL	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC	ENSG00000047410				28	0	0	18	5	21.7391
LGR6	0	genome.wustl.edu	37	1	202287206	202287206	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	202287206	202287206	T	-	DEL	LGR6	ENST00000367278	human	ensembl	74_37	+1	known	frame_shift_del	c.1775	p.V592fs	0.003	pfam_GPCR_Rhodpsn	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	-	no_errors	LGR6	HGNC	ENSG00000133067				66	0	0	91	40	30.5344
PPP1R12B	0	genome.wustl.edu	37	1	202407190	202407190	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	202407190	202407190	T	-	DEL	PPP1R12B	ENST00000480184	human	ensembl	74_37	+1	novel	frame_shift_del	c.1496	p.F502fs	0.041	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R12B	HGNC	ENSG00000077157				28	0	0	14	11	44
CR2	0	genome.wustl.edu	37	1	207644227	207644227	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	207644227	207644227	G	-	DEL	CR2	ENST00000367057	human	ensembl	74_37	+1	known	frame_shift_del	c.1368	p.V458fs	0.024	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322				58	0	0	30	15	33.3333
PTPN14	0	genome.wustl.edu	37	1	214705526	214705527	+	RNA	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	214705526	214705527	-	C	INS	PTPN14	ENST00000491277	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.021:0.023	-	-	-	no_errors	PTPN14	HGNC	ENSG00000152104				24	0	0	19	8	29.6296
KCTD3	0	genome.wustl.edu	37	1	215747171	215747171	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	215747171	215747171	T	-	DEL	KCTD3	ENST00000259154	human	ensembl	74_37	+1	known	frame_shift_del	c.126	p.S45fs	0.199	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,superfamily_WD40_repeat_dom,smart_BTB/POZ-like,smart_WD40_repeat,pfscan_BTB/POZ-like	-	no_errors	KCTD3	HGNC	ENSG00000136636				99	0	0	43	20	31.746
HSPG2	0	genome.wustl.edu	37	1	22191465	22191467	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	22191465	22191467	GGA	-	DEL	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	in_frame_del	c.4497_4495	p.S1499in_frame_del	0.017:0.995:1.000	pfam_Laminin_B_type_IV,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				10	0	0	11	5	31.25
GUK1	0	genome.wustl.edu	37	1	228335304	228335304	+	RNA	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	228335304	228335304	C	-	DEL	GUK1	ENST00000477206	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GUK1	HGNC	ENSG00000143774				90	0	0	84	34	28.8136
EXOC8	0	genome.wustl.edu	37	1	231471450	231471450	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	231471450	231471450	A	-	DEL	EXOC8	ENST00000360394	human	ensembl	74_37	-1	known	frame_shift_del	c.2042	p.L681fs	0.999	NULL	superfamily_Cullin_repeat-like_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	EXOC8	HGNC	ENSG00000116903				121	0	0	72	40	35.7143
PCNXL2	0	genome.wustl.edu	37	1	233313614	233313614	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	233313614	233313614	T	-	DEL	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	frame_shift_del	c.3207	p.K1069fs	0.183	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				37	0	0	18	6	25
FMN2	0	genome.wustl.edu	37	1	240256024	240256026	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	240256024	240256026	GCA	-	DEL	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	in_frame_del	c.615_617	p.Q209in_frame_del	0.989:1.000:1.000	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				26	0	0	30	10	25
FMN2	0	genome.wustl.edu	37	1	240256111	240256112	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	240256111	240256112	-	C	INS	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	frame_shift_ins	c.702_703	p.T236fs	0.000:0.000	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				12	0	0	7	3	30
FMN2	0	genome.wustl.edu	37	1	240371335	240371335	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	240371335	240371335	C	-	DEL	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	frame_shift_del	c.3223	p.P1076fs	0.593	pfam_Formin_homology_1,smart_FH2_Formin	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				25	0	0	19	2	9.52381
NLRP3	0	genome.wustl.edu	37	1	247588106	247588106	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	247588106	247588106	G	-	DEL	NLRP3	ENST00000336119	human	ensembl	74_37	+1	known	frame_shift_del	c.1361	p.G455fs	0.001	pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711				37	0	0	37	15	28.8462
TINAGL1	0	genome.wustl.edu	37	1	32051207	32051208	+	RNA	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	32051207	32051208	-	C	INS	TINAGL1	ENST00000463112	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TINAGL1	HGNC	ENSG00000142910				23	0	0	14	11	44
PTP4A2	0	genome.wustl.edu	37	1	32384717	32384717	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	32384717	32384717	A	-	DEL	PTP4A2	ENST00000532289	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PTP4A2	HGNC	ENSG00000184007				16	0	0	9	9	50
ZMYM6	0	genome.wustl.edu	37	1	35484912	35484912	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	35484912	35484912	A	-	DEL	ZMYM6	ENST00000317538	human	ensembl	74_37	-1	novel	frame_shift_del	c.470	p.L157fs	0.001	NULL	pfam_Znf_MYM,smart_TRASH_dom	-	no_errors	ZMYM6	HGNC	ENSG00000163867				61	0	0	23	14	37.8378
UTP11L	0	genome.wustl.edu	37	1	38483297	38483297	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	38483297	38483297	T	-	DEL	UTP11L	ENST00000488453	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	UTP11L	HGNC	ENSG00000183520				17	0	0	13	9	40.9091
HIVEP3	0	genome.wustl.edu	37	1	42048716	42048716	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	42048716	42048716	G	-	DEL	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	frame_shift_del	c.1753	p.R585fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				62	0	0	59	33	35.8696
CLDN19	0	genome.wustl.edu	37	1	43204235	43204236	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	43204235	43204236	-	C	INS	CLDN19	ENST00000296387	human	ensembl	74_37	-1	known	frame_shift_ins	c.245_244	p.A82fs	1.000:1.000	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	-	no_errors	CLDN19	HGNC	ENSG00000164007				29	0	0	22	21	48.8372
B4GALT2	0	genome.wustl.edu	37	1	44447007	44447012	+	In_Frame_Del	DEL	AGCAGC	AGCAGC	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AGCAGC	AGCAGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	44447007	44447012	AGCAGC	-	DEL	B4GALT2	ENST00000309519	human	ensembl	74_37	+1	known	in_frame_del	c.262_267	p.SS91in_frame_del	0.928:0.906:0.885:0.869:0.873:0.882	NULL	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT2	HGNC	ENSG00000117411				49	0	0	56	20	26.3158
PTCH2	0	genome.wustl.edu	37	1	45288153	45288154	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	45288153	45288154	-	G	INS	PTCH2	ENST00000372192	human	ensembl	74_37	-1	known	frame_shift_ins	c.3546_3545	p.W1183fs	0.075:0.078	NULL	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH2	HGNC	ENSG00000117425				56	0	0	48	41	46.0674
LRRC41	0	genome.wustl.edu	37	1	46726877	46726877	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	46726877	46726877	T	-	DEL	LRRC41	ENST00000496156	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LRRC41	HGNC	ENSG00000132128				25	0	0	16	6	27.2727
OSBPL9	0	genome.wustl.edu	37	1	52246930	52246930	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	52246930	52246930	A	-	DEL	OSBPL9	ENST00000371710	human	ensembl	74_37	+1	known	frame_shift_del	c.1405	p.K470fs	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL9	HGNC	ENSG00000117859				31	0	0	13	8	38.0952
NRD1	0	genome.wustl.edu	37	1	52305912	52305912	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	52305912	52305912	T	-	DEL	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	frame_shift_del	c.616	p.T206fs	1.000	superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	NRD1	HGNC	ENSG00000078618				46	0	0	34	13	27.6596
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251				44	0	0	18	13	41.9355
ZRANB2	0	genome.wustl.edu	37	1	71535065	71535065	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	71535065	71535065	T	-	DEL	ZRANB2	ENST00000487510	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZRANB2	HGNC	ENSG00000132485				38	0	0	14	18	56.25
LHX8	0	genome.wustl.edu	37	1	75602895	75602896	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	75602895	75602896	GT	-	DEL	LHX8	ENST00000294638	human	ensembl	74_37	+1	known	frame_shift_del	c.216_217	p.C75fs	1.000:1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX8	HGNC	ENSG00000162624				22	0	0	21	14	40
CCDC18	0	genome.wustl.edu	37	1	93667515	93667516	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	1	93667515	93667516	-	A	INS	CCDC18	ENST00000557479	human	ensembl	74_37	+1	known	frame_shift_ins	c.1119_1120	p.V376fs	1.000:1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483				40	0	0	19	2	9.52381
SH3PXD2A	0	genome.wustl.edu	37	10	105484098	105484098	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	105484098	105484098	G	-	DEL	SH3PXD2A	ENST00000369774	human	ensembl	74_37	-1	known	frame_shift_del	c.328	p.H110fs	0.989	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2A	HGNC	ENSG00000107957				33	0	0	24	9	27.2727
COL17A1	0	genome.wustl.edu	37	10	105819448	105819448	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	105819448	105819448	T	-	DEL	COL17A1	ENST00000353479	human	ensembl	74_37	-1	known	frame_shift_del	c.1170	p.E391fs	0.999	NULL	pfam_Collagen	-	no_errors	COL17A1	HGNC	ENSG00000065618				70	0	0	70	14	16.6667
XPNPEP1	0	genome.wustl.edu	37	10	111651337	111651337	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	111651337	111651337	T	-	DEL	XPNPEP1	ENST00000475123	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	XPNPEP1	HGNC	ENSG00000108039				11	0	0	6	10	62.5
PWWP2B	0	genome.wustl.edu	37	10	134218255	134218255	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	134218255	134218255	C	-	DEL	PWWP2B	ENST00000305233	human	ensembl	74_37	+1	known	frame_shift_del	c.251	p.P86fs	0.183	NULL	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	PWWP2B	HGNC	ENSG00000171813				76	0	0	106	34	24.2857
KIAA1217	0	genome.wustl.edu	37	10	24784015	24784017	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	24784015	24784017	AAA	-	DEL	KIAA1217	ENST00000460373	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.003:0.002	-	-	-	no_errors	KIAA1217	HGNC	ENSG00000120549				32	0	0	17	14	45.1613
PTCHD3	0	genome.wustl.edu	37	10	27687763	27687763	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	27687763	27687763	A	-	DEL	PTCHD3	ENST00000438700	human	ensembl	74_37	-1	known	frame_shift_del	c.1764	p.F588fs	0.992	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077				90	0	0	45	7	13.4615
KIF5B	0	genome.wustl.edu	37	10	32307245	32307245	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	32307245	32307245	T	-	DEL	KIF5B	ENST00000302418	human	ensembl	74_37	-1	known	frame_shift_del	c.2438	p.K813fs	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5B	HGNC	ENSG00000170759				93	0	0	96	16	14.2857
CREM	0	genome.wustl.edu	37	10	35456559	35456559	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	35456559	35456559	T	-	DEL	CREM	ENST00000497686	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CREM	HGNC	ENSG00000095794				32	0	0	20	11	35.4839
ENSG00000234864	0	genome.wustl.edu	37	10	43199666	43199667	+	RNA	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	43199666	43199667	-	A	INS	ENSG00000234864	ENST00000439913	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.021:0.000	-	-	-	no_errors	AL022344.5	Clone_based_vega_gene	ENSG00000234864				56	0	0	55	10	15.3846
ENSG00000235939	0	genome.wustl.edu	37	10	50680934	50680934	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	50680934	50680934	A	-	DEL	ENSG00000235939	ENST00000423283	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-123B3.2	Clone_based_vega_gene	ENSG00000235939				27	0	0	28	5	15.1515
NET1	0	genome.wustl.edu	37	10	5495005	5495005	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	5495005	5495005	T	-	DEL	NET1	ENST00000465087	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NET1	HGNC	ENSG00000173848				20	0	0	10	3	23.0769
TFAM	0	genome.wustl.edu	37	10	60148570	60148571	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	60148570	60148571	AA	-	DEL	TFAM	ENST00000487519	human	ensembl	74_37	+1	known	frame_shift_del	c.432_433	p.K147fs	0.006:0.936	superfamily_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TFAM	HGNC	ENSG00000108064				84	0	0	58	9	13.4328
HERC4	0	genome.wustl.edu	37	10	69716603	69716604	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	69716603	69716604	AA	-	DEL	HERC4	ENST00000480158	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	HERC4	HGNC	ENSG00000148634				44	0	0	21	10	32.2581
DDX21	0	genome.wustl.edu	37	10	70733354	70733354	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	70733354	70733354	G	-	DEL	DDX21	ENST00000354185	human	ensembl	74_37	+1	known	frame_shift_del	c.1602	p.V536fs	0.001	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_GUCT,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX21	HGNC	ENSG00000165732				62	0	0	69	23	25
SEC24C	0	genome.wustl.edu	37	10	75525559	75525560	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	75525559	75525560	-	C	INS	SEC24C	ENST00000339365	human	ensembl	74_37	+1	known	frame_shift_ins	c.1368_1369	p.Q458fs	1.000:1.000	pfam_Znf_Sec23_Sec24,superfamily_Znf_Sec23_Sec24	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24C	HGNC	ENSG00000176986				161	0	0	119	36	23.2258
ZNF518A	0	genome.wustl.edu	37	10	97916130	97916130	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	10	97916130	97916130	A	-	DEL	ZNF518A	ENST00000478086	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853				48	0	0	38	10	20.8333
CASP5	0	genome.wustl.edu	37	11	104874011	104874011	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	104874011	104874011	T	-	DEL	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	frame_shift_del	c.572	p.N191fs	0.006	pirsf_Caspase_IL-1_beta	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757				107	0	0	56	35	38.4615
DLAT	0	genome.wustl.edu	37	11	111896977	111896977	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	111896977	111896977	A	-	DEL	DLAT	ENST00000280346	human	ensembl	74_37	+1	known	frame_shift_del	c.335	p.E115fs	1.000	pfam_Biotin_lipoyl,superfamily_Single_hybrid_motif,pfscan_Biotin_lipoyl	pfam_2-oxoacid_DH_actylTfrase,pfam_Biotin_lipoyl,pfam_E3-bd,superfamily_Single_hybrid_motif,superfamily_E3-bd,pfscan_Biotin_lipoyl,tigrfam_LAT1	-	no_errors	DLAT	HGNC	ENSG00000150768				21	0	0	15	4	21.0526
DLAT	0	genome.wustl.edu	37	11	111904183	111904183	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	111904183	111904183	A	-	DEL	DLAT	ENST00000280346	human	ensembl	74_37	+1	known	frame_shift_del	c.716	p.V242fs	1.000	pfam_Biotin_lipoyl,superfamily_Single_hybrid_motif,pfscan_Biotin_lipoyl,tigrfam_LAT1	pfam_2-oxoacid_DH_actylTfrase,pfam_Biotin_lipoyl,pfam_E3-bd,superfamily_Single_hybrid_motif,superfamily_E3-bd,pfscan_Biotin_lipoyl,tigrfam_LAT1	-	no_errors	DLAT	HGNC	ENSG00000150768				31	0	0	10	6	37.5
C11orf57	0	genome.wustl.edu	37	11	111953289	111953289	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	111953289	111953289	A	-	DEL	C11orf57	ENST00000393047	human	ensembl	74_37	+1	known	frame_shift_del	c.475	p.K161fs	1.000	NULL	NULL	-	no_errors	C11orf57	HGNC	ENSG00000150776				38	0	0	19	20	51.2821
REXO2	0	genome.wustl.edu	37	11	114320750	114320750	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	114320750	114320750	T	-	DEL	REXO2	ENST00000544507	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	REXO2	HGNC	ENSG00000076043				73	0	0	50	25	33.3333
C1QTNF5	0	genome.wustl.edu	37	11	119210190	119210190	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	119210190	119210190	C	-	DEL	C1QTNF5	ENST00000445041	human	ensembl	74_37	-1	known	frame_shift_del	c.583	p.A195fs	0.976	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF5	HGNC	ENSG00000223953				101	1	0.980392	63	40	38.835
SRPR	0	genome.wustl.edu	37	11	126137087	126137087	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	126137087	126137087	T	-	DEL	SRPR	ENST00000332118	human	ensembl	74_37	-1	known	frame_shift_del	c.509	p.K170fs	0.991	pfam_Sig_recog_particle_rcpt_asu_N	pfam_Sig_recog_particle_rcpt_asu_N,pfam_SRP54_GTPase_dom,pfam_ArgK,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_Signal_recog_particl_SRP54_hlx,superfamily_Longin-like_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom	-	no_errors	SRPR	HGNC	ENSG00000182934				246	1	0.404858	104	55	34.5912
ADAMTS8	0	genome.wustl.edu	37	11	130278693	130278693	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	130278693	130278693	C	-	DEL	ADAMTS8	ENST00000257359	human	ensembl	74_37	-1	known	frame_shift_del	c.1893	p.R632fs	0.920	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS8,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS8	HGNC	ENSG00000134917				126	0	0	105	59	35.9756
CCDC73	0	genome.wustl.edu	37	11	32635951	32635951	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	32635951	32635951	T	-	DEL	CCDC73	ENST00000335185	human	ensembl	74_37	-1	known	frame_shift_del	c.1913	p.N638fs	0.024	NULL	NULL	-	no_errors	CCDC73	HGNC	ENSG00000186714				34	0	0	13	10	43.4783
GYLTL1B	0	genome.wustl.edu	37	11	45948373	45948373	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	45948373	45948373	C	-	DEL	GYLTL1B	ENST00000325468	human	ensembl	74_37	+1	known	frame_shift_del	c.1276	p.R428fs	0.023	NULL	pfam_Glyco_trans_8	-	no_errors	GYLTL1B	HGNC	ENSG00000165905				54	0	0	77	8	9.41176
ACP2	0	genome.wustl.edu	37	11	47266285	47266285	+	Splice_Site	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	47266285	47266285	C	-	DEL	ACP2	ENST00000256997	human	ensembl	74_37	-1	known	splice_site_del	c.772+1	e7+1	1.000	-	-	-	no_errors	ACP2	HGNC	ENSG00000134575				70	0	0	89	33	27.0492
PTPMT1	0	genome.wustl.edu	37	11	47594388	47594388	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	47594388	47594388	A	-	DEL	PTPMT1	ENST00000527079	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	PTPMT1	HGNC	ENSG00000110536				9	0	0	8	7	46.6667
PTPRJ	0	genome.wustl.edu	37	11	48149450	48149450	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	48149450	48149450	G	-	DEL	PTPRJ	ENST00000418331	human	ensembl	74_37	+1	known	frame_shift_del	c.1212	p.E406fs	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRJ	HGNC	ENSG00000149177				112	1	0.884956	82	36	30.5085
FAM111B	0	genome.wustl.edu	37	11	58892377	58892378	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	58892377	58892378	AA	-	DEL	FAM111B	ENST00000343597	human	ensembl	74_37	+1	known	frame_shift_del	c.807_808	p.K272fs	0.000:0.000	NULL	superfamily_Trypsin-like_Pept_dom	-	no_errors	FAM111B	HGNC	ENSG00000189057				44	0	0	26	7	21.2121
OR4D9	0	genome.wustl.edu	37	11	59282706	59282706	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	59282706	59282706	G	-	DEL	OR4D9	ENST00000329328	human	ensembl	74_37	+1	known	frame_shift_del	c.321	p.G109fs	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D9	HGNC	ENSG00000172742				92	0	0	47	28	37.3333
RPLP0P2	0	genome.wustl.edu	37	11	61405179	61405180	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	61405179	61405180	AA	-	DEL	RPLP0P2	ENST00000496593	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.975:0.974	-	-	-	no_errors	RPLP0P2	HGNC	ENSG00000243742				20	0	0	12	7	36.8421
RARRES3	0	genome.wustl.edu	37	11	63313709	63313709	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	63313709	63313709	A	-	DEL	RARRES3	ENST00000255688	human	ensembl	74_37	+1	known	frame_shift_del	c.476	p.A162fs	0.001	NULL	pfam_LRAT-like_dom	-	no_errors	RARRES3	HGNC	ENSG00000133321				121	1	0.819672	130	46	26.1364
ADRBK1	0	genome.wustl.edu	37	11	67051562	67051562	+	RNA	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	67051562	67051562	G	-	DEL	ADRBK1	ENST00000531390	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.349	-	-	-	no_errors	ADRBK1	HGNC	ENSG00000173020				20	0	0	7	10	58.8235
MYEOV	0	genome.wustl.edu	37	11	69063724	69063724	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	69063724	69063724	G	-	DEL	MYEOV	ENST00000308946	human	ensembl	74_37	+1	known	frame_shift_del	c.807	p.W272fs	0.001	NULL	NULL	-	no_errors	MYEOV	HGNC	ENSG00000172927				27	0	0	19	12	38.7097
ENSG00000254420	0	genome.wustl.edu	37	11	78154811	78154812	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	78154811	78154812	AA	-	DEL	ENSG00000254420	ENST00000534168	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.006	-	-	-	no_errors	RP11-452H21.1	Clone_based_vega_gene	ENSG00000254420				30	0	0	11	8	42.1053
RIC3	0	genome.wustl.edu	37	11	8159967	8159968	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	8159967	8159968	AA	-	DEL	RIC3	ENST00000524799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RIC3	HGNC	ENSG00000166405				58	0	0	33	17	34
SYTL2	0	genome.wustl.edu	37	11	85437306	85437306	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	85437306	85437306	T	-	DEL	SYTL2	ENST00000359152	human	ensembl	74_37	-1	known	frame_shift_del	c.1766	p.N589fs	0.028	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYTL2	HGNC	ENSG00000137501				98	0	0	50	27	35.0649
SLC36A4	0	genome.wustl.edu	37	11	92887400	92887401	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	92887400	92887401	-	A	INS	SLC36A4	ENST00000326402	human	ensembl	74_37	-1	known	frame_shift_ins	c.1081_1080	p.V360fs	1.000:1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC36A4	HGNC	ENSG00000180773				57	0	0	23	19	45.2381
SWAP70	0	genome.wustl.edu	37	11	9735070	9735070	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	11	9735070	9735070	A	-	DEL	SWAP70	ENST00000318950	human	ensembl	74_37	+1	known	frame_shift_del	c.298	p.N102fs	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_EF_hand_dom,pfscan_Pleckstrin_homology	-	no_errors	SWAP70	HGNC	ENSG00000133789				84	0	0	33	23	41.0714
UHRF1BP1L	0	genome.wustl.edu	37	12	100441791	100441791	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	100441791	100441791	A	-	DEL	UHRF1BP1L	ENST00000279907	human	ensembl	74_37	-1	known	frame_shift_del	c.3902	p.L1301fs	1.000	NULL	NULL	-	no_errors	UHRF1BP1L	HGNC	ENSG00000111647				30	0	0	11	10	47.619
PMCH	0	genome.wustl.edu	37	12	102591346	102591346	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	102591346	102591346	T	-	DEL	PMCH	ENST00000329406	human	ensembl	74_37	-1	known	frame_shift_del	c.203	p.N68fs	0.362	NULL	pfam_Prepro-melanin_conc_hormone,prints_Prepro-melanin_conc_hormone	-	no_errors	PMCH	HGNC	ENSG00000183395				68	0	0	32	14	30.4348
HSP90B1	0	genome.wustl.edu	37	12	104332202	104332204	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	104332202	104332204	GAA	-	DEL	HSP90B1	ENST00000299767	human	ensembl	74_37	+1	known	in_frame_del	c.940_942	p.E317in_frame_del	1.000:1.000:0.985	pirsf_Hsp90_fam,pfam_Hsp90_fam,superfamily_HATPase_ATP-bd	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90B1	HGNC	ENSG00000166598				21	0	0	15	3	16.6667
DAO	0	genome.wustl.edu	37	12	109283287	109283288	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	109283287	109283288	-	C	INS	DAO	ENST00000228476	human	ensembl	74_37	+1	known	frame_shift_ins	c.352_353	p.R120fs	0.998:0.953	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase	-	no_errors	DAO	HGNC	ENSG00000110887				91	0	0	54	16	22.8571
SNRNP35	0	genome.wustl.edu	37	12	123950763	123950764	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	123950763	123950764	GA	-	DEL	SNRNP35	ENST00000412157	human	ensembl	74_37	+1	known	frame_shift_del	c.691_692	p.R234fs	1.000:0.993	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SNRNP35	HGNC	ENSG00000184209				51	0	0	41	16	28.0702
RPL22P19	0	genome.wustl.edu	37	12	125420367	125420367	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	125420367	125420367	T	-	DEL	RPL22P19	ENST00000480427	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL22P19	HGNC	ENSG00000241129				11	0	0	6	7	53.8462
ULK1	0	genome.wustl.edu	37	12	132402065	132402066	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	132402065	132402066	-	C	INS	ULK1	ENST00000321867	human	ensembl	74_37	+1	known	frame_shift_ins	c.2292_2293	p.Q766fs	0.024:0.683	pirsf_Ser/Thr_kin_STPK_Ulk-1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ser/Thr_kinase_C,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK1	HGNC	ENSG00000177169				14	0	0	7	9	56.25
GYS2	0	genome.wustl.edu	37	12	21712605	21712605	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	21712605	21712605	T	-	DEL	GYS2	ENST00000261195	human	ensembl	74_37	-1	known	frame_shift_del	c.1209	p.K403fs	1.000	pfam_Glycogen_synth	pfam_Glycogen_synth,pfam_Glyco_trans_1	-	no_errors	GYS2	HGNC	ENSG00000111713				38	0	0	22	9	29.0323
PKP2	0	genome.wustl.edu	37	12	33031037	33031039	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	33031037	33031039	CTC	-	DEL	PKP2	ENST00000070846	human	ensembl	74_37	-1	known	in_frame_del	c.777_775	p.E259in_frame_del	1.000:1.000:1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP2	HGNC	ENSG00000057294				49	0	0	43	11	20.3704
ZCRB1	0	genome.wustl.edu	37	12	42707703	42707703	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	42707703	42707703	T	-	DEL	ZCRB1	ENST00000266529	human	ensembl	74_37	-1	known	frame_shift_del	c.419	p.K140fs	1.000	NULL	pfam_RRM_dom,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_RRM_dom_euk,smart_RRM_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_RRM_dom	-	no_errors	ZCRB1	HGNC	ENSG00000139168				32	0	0	18	11	37.931
ENDOU	0	genome.wustl.edu	37	12	48106392	48106392	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	48106392	48106392	T	-	DEL	ENDOU	ENST00000229003	human	ensembl	74_37	-1	known	frame_shift_del	c.756	p.G253fs	0.950	pfam_Endoribonuclease_XendoU	pfam_Endoribonuclease_XendoU,pfam_Somatomedin_B_dom,smart_Somatomedin_B_dom,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENDOU	HGNC	ENSG00000111405				26	0	0	19	9	32.1429
SENP1	0	genome.wustl.edu	37	12	48458896	48458896	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	48458896	48458896	T	-	DEL	SENP1	ENST00000004980	human	ensembl	74_37	-1	known	frame_shift_del	c.1227	p.G410fs	0.206	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP1	HGNC	ENSG00000079387				26	0	0	21	9	30
CBX5	0	genome.wustl.edu	37	12	54645832	54645832	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	54645832	54645832	T	-	DEL	CBX5	ENST00000209875	human	ensembl	74_37	-1	known	frame_shift_del	c.317	p.K106fs	1.000	superfamily_Chromodomain-like	pfam_Chromo_shadow_dom,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Chromo_shadow_dom,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX5	HGNC	ENSG00000094916				158	0	0	77	33	30
STAT2	0	genome.wustl.edu	37	12	56742816	56742817	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	56742816	56742817	-	G	INS	STAT2	ENST00000314128	human	ensembl	74_37	-1	known	frame_shift_ins	c.1468_1467	p.K489fs	0.000:0.000	pfam_STAT_TF_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_STAT2_C,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT2	HGNC	ENSG00000170581				72	0	0	76	31	28.972
MBD6	0	genome.wustl.edu	37	12	57921002	57921002	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	57921002	57921002	C	-	DEL	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_del	c.2074	p.Q694fs	0.764	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987				13	0	0	11	3	21.4286
RIMKLB	0	genome.wustl.edu	37	12	8926321	8926321	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	12	8926321	8926321	G	-	DEL	RIMKLB	ENST00000357529	human	ensembl	74_37	+1	known	frame_shift_del	c.1102	p.G369fs	1.000	NULL	pfam_ATP-grasp_RimK-type,pfam_GSHS_ATP-bd,pfam_ATP-grasp_DUF201-type,pfscan_ATP-grasp,tigrfam_RpS6_RimK/Lys_biosynth_LsyX	-	no_errors	RIMKLB	HGNC	ENSG00000166532				119	0	0	132	62	31.9588
TMEM255B	0	genome.wustl.edu	37	13	114514908	114514908	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	114514908	114514908	T	-	DEL	TMEM255B	ENST00000467169	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM255B	HGNC	ENSG00000184497				84	0	0	85	16	15.8416
PDS5B	0	genome.wustl.edu	37	13	33306277	33306278	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	33306277	33306278	-	C	INS	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	frame_shift_ins	c.2163_2164	p.R723fs	1.000:1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642				38	0	0	33	7	17.5
PDS5B	0	genome.wustl.edu	37	13	33344568	33344568	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	33344568	33344568	A	-	DEL	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	frame_shift_del	c.3934	p.G1314fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642				39	0	0	26	14	35
ZC3H13	0	genome.wustl.edu	37	13	46549602	46549603	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	46549602	46549603	-	CT	INS	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	frame_shift_ins	c.2284_2283	p.R761fs	0.879:0.882	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200				57	0	0	40	26	39.3939
TDRD3	0	genome.wustl.edu	37	13	61084778	61084779	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	13	61084778	61084779	-	GG	INS	TDRD3	ENST00000535286	human	ensembl	74_37	+1	known	frame_shift_ins	c.1030_1031	p.R346fs	1.000:1.000	NULL	pfam_DUF1767,pfam_Tudor,pfam_Survival_motor_neuron,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,smart_Tudor,pfscan_Tudor,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TDRD3	HGNC	ENSG00000083544				52	0	0	29	15	34.0909
DYNC1H1	0	genome.wustl.edu	37	14	102445788	102445788	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	102445788	102445788	T	-	DEL	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	frame_shift_del	c.477	p.F161fs	0.979	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102				107	0	0	58	37	38.9474
MOK	0	genome.wustl.edu	37	14	102718303	102718303	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	102718303	102718303	T	-	DEL	MOK	ENST00000361847	human	ensembl	74_37	-1	known	frame_shift_del	c.313	p.I105fs	0.007	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MOK	HGNC	ENSG00000080823				54	0	0	30	10	25
TEP1	0	genome.wustl.edu	37	14	20852227	20852227	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	20852227	20852227	C	-	DEL	TEP1	ENST00000262715	human	ensembl	74_37	-1	known	frame_shift_del	c.3504	p.Q1169fs	0.927	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_TROVE,pfam_TEP1_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_NACHT_NTPase,pfscan_TROVE,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TEP1	HGNC	ENSG00000129566				34	0	0	45	19	29.6875
SALL2	0	genome.wustl.edu	37	14	21992285	21992285	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	21992285	21992285	T	-	DEL	SALL2	ENST00000327430	human	ensembl	74_37	-1	known	frame_shift_del	c.1577	p.N526fs	0.996	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL2	HGNC	ENSG00000165821				60	0	0	32	17	34.6939
ENSG00000258457	0	genome.wustl.edu	37	14	23459112	23459113	+	RNA	DEL	AG	AG	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	23459112	23459113	AG	-	DEL	ENSG00000258457	ENST00000556503	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006:0.048	-	-	-	no_errors	RP11-298I3.4	Clone_based_vega_gene	ENSG00000258457				31	0	0	16	5	23.8095
CDH24	0	genome.wustl.edu	37	14	23517514	23517514	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	23517514	23517514	G	-	DEL	CDH24	ENST00000267383	human	ensembl	74_37	-1	known	frame_shift_del	c.2135	p.P712fs	0.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH24	HGNC	ENSG00000139880				52	0	0	61	39	39
ACIN1	0	genome.wustl.edu	37	14	23549379	23549379	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	23549379	23549379	C	-	DEL	ACIN1	ENST00000262710	human	ensembl	74_37	-1	known	frame_shift_del	c.1339	p.A447fs	0.998	NULL	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	ACIN1	HGNC	ENSG00000100813				82	0	0	58	23	28.3951
NFATC4	0	genome.wustl.edu	37	14	24843554	24843563	+	Frame_Shift_Del	DEL	GCCCCAGGTG	GCCCCAGGTG	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	GCCCCAGGTG	GCCCCAGGTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	24843554	24843563	GCCCCAGGTG	-	DEL	NFATC4	ENST00000413692	human	ensembl	74_37	+1	known	frame_shift_del	c.1944_1953	p.P649fs	0.993:1.000:1.000:0.964:0.999:1.000:1.000:1.000:1.000:1.000	pfam_IPT,superfamily_Ig_E-set,smart_IPT,prints_NFAT	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC4	HGNC	ENSG00000100968				28	0	0	23	14	37.8378
SIPA1L1	0	genome.wustl.edu	37	14	72190553	72190554	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	72190553	72190554	-	A	INS	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	frame_shift_ins	c.4461_4462	p.P1489fs	1.000:1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555				101	0	0	80	34	29.8246
VASH1	0	genome.wustl.edu	37	14	77229171	77229171	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	77229171	77229171	G	-	DEL	VASH1	ENST00000167106	human	ensembl	74_37	+1	known	frame_shift_del	c.7	p.K5fs	0.996	NULL	NULL	-	no_errors	VASH1	HGNC	ENSG00000071246				10	0	0	14	8	36.3636
ASB2	0	genome.wustl.edu	37	14	94405856	94405857	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	14	94405856	94405857	GC	-	DEL	ASB2	ENST00000315988	human	ensembl	74_37	-1	known	frame_shift_del	c.1071_1070	p.R357fs	0.996:1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB2	HGNC	ENSG00000100628				24	0	0	16	9	36
NPAP1	0	genome.wustl.edu	37	15	24921326	24921326	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	24921326	24921326	C	-	DEL	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	frame_shift_del	c.312	p.P106fs	0.000	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823				37	0	0	33	20	37.7358
SNORD116-29	0	genome.wustl.edu	37	15	25351684	25351684	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	25351684	25351684	A	-	DEL	SNORD116-29	ENST00000384516	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD116-29	HGNC	ENSG00000207245				52	0	0	45	24	34.7826
ATP10A	0	genome.wustl.edu	37	15	25924677	25924678	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	25924677	25924678	-	A	INS	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	frame_shift_ins	c.4311_4310	p.L1437fs	0.000:0.379	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190				59	0	0	82	9	9.89011
RMDN3	0	genome.wustl.edu	37	15	41029894	41029894	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	41029894	41029894	T	-	DEL	RMDN3	ENST00000260385	human	ensembl	74_37	-1	known	frame_shift_del	c.1156	p.T386fs	1.000	NULL	NULL	-	no_errors	RMDN3	HGNC	ENSG00000137824				43	0	0	41	12	22.6415
COPS2	0	genome.wustl.edu	37	15	49426244	49426244	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	49426244	49426244	A	-	DEL	COPS2	ENST00000299259	human	ensembl	74_37	-1	known	frame_shift_del	c.798	p.F266fs	1.000	smart_PAM	pfam_PCI_dom,smart_PAM,smart_PCI_dom	-	no_errors	COPS2	HGNC	ENSG00000166200				61	0	0	26	12	31.5789
ENSG00000259241	0	genome.wustl.edu	37	15	51987960	51987962	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	51987960	51987962	AAA	-	DEL	ENSG00000259241	ENST00000559918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006:0.012:0.011	-	-	-	no_errors	RP11-313P18.2	Clone_based_vega_gene	ENSG00000259241				17	0	0	7	3	30
ENSG00000259185	0	genome.wustl.edu	37	15	52201131	52201131	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	52201131	52201131	T	-	DEL	ENSG00000259185	ENST00000559302	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-56B16.4	Clone_based_vega_gene	ENSG00000259185				8	0	0	7	3	30
DYX1C1	0	genome.wustl.edu	37	15	55759182	55759182	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	55759182	55759182	T	-	DEL	DYX1C1	ENST00000321149	human	ensembl	74_37	-1	known	frame_shift_del	c.583	p.I195fs	0.004	NULL	pfam_TPR_1,pfam_CS_dom,superfamily_HSP20-like_chaperone,smart_TPR_repeat,pfscan_CS_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	DYX1C1	HGNC	ENSG00000256061				25	0	0	14	5	26.3158
USP3-AS1	0	genome.wustl.edu	37	15	63881043	63881043	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	63881043	63881043	A	-	DEL	USP3-AS1	ENST00000558831	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	USP3-AS1	HGNC	ENSG00000259248				122	0	0	76	43	36.1345
HERC1	0	genome.wustl.edu	37	15	63944710	63944711	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	63944710	63944711	-	T	INS	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	frame_shift_ins	c.10321_10320	p.G3440fs	1.000:1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657				11	0	0	6	3	33.3333
ZNF609	0	genome.wustl.edu	37	15	64967247	64967247	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	64967247	64967247	A	-	DEL	ZNF609	ENST00000326648	human	ensembl	74_37	+1	known	frame_shift_del	c.2194	p.K734fs	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357				125	1	0.793651	131	74	36.0976
TIPIN	0	genome.wustl.edu	37	15	66672095	66672095	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	66672095	66672095	T	-	DEL	TIPIN	ENST00000561773	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	TIPIN	HGNC	ENSG00000075131				58	0	0	35	19	35.1852
IDH2	0	genome.wustl.edu	37	15	90631917	90631918	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	90631917	90631918	-	C	INS	IDH2	ENST00000330062	human	ensembl	74_37	-1	known	frame_shift_ins	c.436_435	p.T145fs	0.992:0.686	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	-	no_errors	IDH2	HGNC	ENSG00000182054				75	0	0	52	27	34.1772
SEMA4B	0	genome.wustl.edu	37	15	90766838	90766841	+	Frame_Shift_Del	DEL	CCTC	CCTC	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	CCTC	CCTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	15	90766838	90766841	CCTC	-	DEL	SEMA4B	ENST00000332496	human	ensembl	74_37	+1	known	frame_shift_del	c.909_912	p.F303fs	1.000:1.000:1.000:1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4B	HGNC	ENSG00000185033				39	0	0	17	17	50
TVP23A	0	genome.wustl.edu	37	16	10867203	10867203	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	10867203	10867203	A	-	DEL	TVP23A	ENST00000299866	human	ensembl	74_37	-1	known	frame_shift_del	c.420	p.F140fs	1.000	pfam_DUF846_euk	pfam_DUF846_euk	-	no_errors	TVP23A	HGNC	ENSG00000166676				56	0	0	31	17	35.4167
GPR139	0	genome.wustl.edu	37	16	20043085	20043085	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	20043085	20043085	T	-	DEL	GPR139	ENST00000570682	human	ensembl	74_37	-1	known	frame_shift_del	c.1034	p.N345fs	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR139	HGNC	ENSG00000180269				137	0	0	76	47	38.2114
CASKIN1	0	genome.wustl.edu	37	16	2231521	2231522	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	2231521	2231522	-	C	INS	CASKIN1	ENST00000343516	human	ensembl	74_37	-1	known	frame_shift_ins	c.1848_1847	p.L618fs	0.973:0.998	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_SH3_domain,prints_Ankyrin_rpt	-	no_errors	CASKIN1	HGNC	ENSG00000167971				10	0	0	13	5	27.7778
SRCAP	0	genome.wustl.edu	37	16	30734923	30734923	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	30734923	30734923	C	-	DEL	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	frame_shift_del	c.4178	p.L1395fs	1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603				133	0	0	89	41	31.5385
TRAP1	0	genome.wustl.edu	37	16	3716059	3716059	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	3716059	3716059	T	-	DEL	TRAP1	ENST00000246957	human	ensembl	74_37	-1	known	frame_shift_del	c.1296	p.D433fs	0.998	pfam_Hsp90_fam,superfamily_Ribosomal_S5_D2-typ_fold,pirsf_Hsp90_fam	pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pirsf_Hsp90_fam,prints_Hsp90_N	-	no_errors	TRAP1	HGNC	ENSG00000126602				74	0	0	36	24	40
LONP2	0	genome.wustl.edu	37	16	48296693	48296693	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	48296693	48296693	A	-	DEL	LONP2	ENST00000285737	human	ensembl	74_37	+1	known	frame_shift_del	c.892	p.M300fs	1.000	tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP2	HGNC	ENSG00000102910				38	0	0	15	11	42.3077
IRX3	0	genome.wustl.edu	37	16	54319086	54319087	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	54319086	54319087	-	C	INS	IRX3	ENST00000329734	human	ensembl	74_37	-1	known	frame_shift_ins	c.707_706	p.E236fs	1.000:1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX3	HGNC	ENSG00000177508				18	0	0	7	4	36.3636
FAM92B	0	genome.wustl.edu	37	16	85135924	85135924	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	85135924	85135924	A	-	DEL	FAM92B	ENST00000539556	human	ensembl	74_37	-1	known	frame_shift_del	c.547	p.C183fs	0.000	pfam_FAM92	pfam_FAM92	-	no_errors	FAM92B	HGNC	ENSG00000153789				58	0	0	26	17	39.5349
ZC3H18	0	genome.wustl.edu	37	16	88694459	88694459	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	88694459	88694459	C	-	DEL	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	frame_shift_del	c.2401	p.Q804fs	0.269	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545				108	0	0	115	59	33.908
CBFA2T3	0	genome.wustl.edu	37	16	88967982	88967982	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	16	88967982	88967982	G	-	DEL	CBFA2T3	ENST00000268679	human	ensembl	74_37	-1	known	frame_shift_del	c.234	p.S79fs	1.000	NULL	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG16	-	no_errors	CBFA2T3	HGNC	ENSG00000129993				29	0	0	36	30	45.4545
CRK	0	genome.wustl.edu	37	17	1326755	1326758	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	1326755	1326758	AAAA	-	DEL	CRK	ENST00000572145	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.352:0.023:0.010:0.011	-	-	-	no_errors	CRK	HGNC	ENSG00000167193				50	0	0	22	7	24.1379
PAFAH1B1	0	genome.wustl.edu	37	17	2570628	2570628	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	2570628	2570628	A	-	DEL	PAFAH1B1	ENST00000397193	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	PAFAH1B1	HGNC	ENSG00000007168				9	0	0	2	3	60
KIAA0100	0	genome.wustl.edu	37	17	26961947	26961947	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	26961947	26961947	A	-	DEL	KIAA0100	ENST00000528896	human	ensembl	74_37	-1	known	frame_shift_del	c.2658	p.F886fs	1.000	NULL	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202				223	0	0	135	86	38.914
ENSG00000272191	0	genome.wustl.edu	37	17	35300495	35300496	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	35300495	35300496	AA	-	DEL	ENSG00000272191	ENST00000607336	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.027:0.005	-	-	-	no_errors	RP11-445F12.2	Clone_based_vega_gene	ENSG00000272191				13	0	0	7	10	58.8235
STAT5B	0	genome.wustl.edu	37	17	40370235	40370236	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	40370235	40370236	-	G	INS	STAT5B	ENST00000293328	human	ensembl	74_37	-1	known	frame_shift_ins	c.1103_1102	p.Q368fs	1.000:1.000	pfam_STAT_TF_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5B	HGNC	ENSG00000173757				46	0	0	37	17	31.4815
PELP1	0	genome.wustl.edu	37	17	4574987	4574987	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	4574987	4574987	T	-	DEL	PELP1	ENST00000301396	human	ensembl	74_37	-1	known	frame_shift_del	c.3731	p.K1244fs	0.993	NULL	pfam_Uncharacterised_NUC202,superfamily_ARM-type_fold	-	no_errors	PELP1	HGNC	ENSG00000141456				32	0	0	12	18	60
SPAG9	0	genome.wustl.edu	37	17	49077041	49077041	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	49077041	49077041	T	-	DEL	SPAG9	ENST00000262013	human	ensembl	74_37	-1	known	frame_shift_del	c.1645	p.R549fs	1.000	NULL	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	SPAG9	HGNC	ENSG00000008294				60	0	0	13	25	65.7895
COIL	0	genome.wustl.edu	37	17	55028016	55028016	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	55028016	55028016	T	-	DEL	COIL	ENST00000240316	human	ensembl	74_37	-1	known	frame_shift_del	c.587	p.K196fs	0.030	NULL	NULL	-	no_errors	COIL	HGNC	ENSG00000121058				104	1	0.952381	44	38	46.3415
CUEDC1	0	genome.wustl.edu	37	17	55962835	55962835	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	55962835	55962835	G	-	DEL	CUEDC1	ENST00000360238	human	ensembl	74_37	-1	known	frame_shift_del	c.91	p.Q31fs	1.000	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	CUEDC1	HGNC	ENSG00000180891				33	0	0	27	17	38.6364
RNF43	0	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	56435161	56435161	C	-	DEL	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	frame_shift_del	c.1976	p.G659fs	0.900	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375				146	0	0	62	135	68.5279
APPBP2	0	genome.wustl.edu	37	17	58539146	58539146	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	58539146	58539146	A	-	DEL	APPBP2	ENST00000592995	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	APPBP2	HGNC	ENSG00000062725				73	0	0	20	19	48.7179
TNRC6C	0	genome.wustl.edu	37	17	76047106	76047107	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	76047106	76047107	-	G	INS	TNRC6C	ENST00000335749	human	ensembl	74_37	+1	known	frame_shift_ins	c.1963_1964	p.E657fs	1.000:1.000	NULL	pfam_Argonaute_hook_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687				15	0	0	15	9	37.5
RAB40B	0	genome.wustl.edu	37	17	80615785	80615786	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	17	80615785	80615786	-	G	INS	RAB40B	ENST00000571995	human	ensembl	74_37	-1	known	frame_shift_ins	c.791_790	p.Q264fs	1.000:1.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_SOCS_C,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,smart_SOCS_C,pfscan_SOCS_C,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB40B	HGNC	ENSG00000141542				141	1	0.704225	160	32	16.6667
PSMG2	0	genome.wustl.edu	37	18	12720544	12720544	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	12720544	12720544	A	-	DEL	PSMG2	ENST00000317615	human	ensembl	74_37	+1	known	frame_shift_del	c.443	p.S150fs	0.697	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	-	no_errors	PSMG2	HGNC	ENSG00000128789				32	0	0	4	9	69.2308
CABYR	0	genome.wustl.edu	37	18	21739551	21739551	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	21739551	21739551	T	-	DEL	CABYR	ENST00000399496	human	ensembl	74_37	+1	known	frame_shift_del	c.657	p.Q222fs	0.993	NULL	pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	CABYR	HGNC	ENSG00000154040				67	0	0	46	25	35.2113
ENSG00000252258	0	genome.wustl.edu	37	18	3025533	3025533	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	3025533	3025533	A	-	DEL	ENSG00000252258	ENST00000516449	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORA70	RFAM	ENSG00000252258				27	0	0	14	6	30
FHOD3	0	genome.wustl.edu	37	18	34205516	34205516	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	34205516	34205516	C	-	DEL	FHOD3	ENST00000257209	human	ensembl	74_37	+1	known	frame_shift_del	c.1000	p.S336fs	0.999	superfamily_ARM-type_fold	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD3	HGNC	ENSG00000134775				50	0	0	61	48	44.0367
ALPK2	0	genome.wustl.edu	37	18	56246941	56246941	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	18	56246941	56246941	A	-	DEL	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	frame_shift_del	c.1067	p.L356fs	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796				95	0	0	39	37	48.6842
ENSG00000267387	0	genome.wustl.edu	37	19	10200538	10200538	+	RNA	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	10200538	10200538	C	-	DEL	ENSG00000267387	ENST00000589622	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	CTD-2240E14.4	Clone_based_vega_gene	ENSG00000267387				11	0	0	11	4	26.6667
ABCA7	0	genome.wustl.edu	37	19	1058906	1058906	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	1058906	1058906	G	-	DEL	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	frame_shift_del	c.5367	p.D1791fs	0.915	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687				52	0	0	47	7	12.963
DAZAP1	0	genome.wustl.edu	37	19	1430254	1430254	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	1430254	1430254	C	-	DEL	DAZAP1	ENST00000233078	human	ensembl	74_37	+1	known	frame_shift_del	c.764	p.P257fs	0.998	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	DAZAP1	HGNC	ENSG00000071626				26	0	0	32	19	37.2549
ZNF90	0	genome.wustl.edu	37	19	20216076	20216076	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	20216076	20216076	A	-	DEL	ZNF90	ENST00000418063	human	ensembl	74_37	+1	known	frame_shift_del	c.177	p.K61fs	0.002	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF90	HGNC	ENSG00000213988				87	0	0	48	18	27.2727
ZNF626	0	genome.wustl.edu	37	19	20808338	20808338	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	20808338	20808338	T	-	DEL	ZNF626	ENST00000601440	human	ensembl	74_37	-1	known	frame_shift_del	c.345	p.G116fs	0.003	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF626	HGNC	ENSG00000188171				93	0	0	40	20	33.3333
NCLN	0	genome.wustl.edu	37	19	3204745	3204745	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	3204745	3204745	G	-	DEL	NCLN	ENST00000246117	human	ensembl	74_37	+1	known	frame_shift_del	c.1204	p.V402fs	0.987	pirsf_Nicalin	pfam_Peptidase_M28,pfam_Nicastrin,pirsf_Nicalin	-	no_errors	NCLN	HGNC	ENSG00000125912				12	0	0	15	8	34.7826
FZR1	0	genome.wustl.edu	37	19	3532525	3532525	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	3532525	3532525	G	-	DEL	FZR1	ENST00000395095	human	ensembl	74_37	+1	known	frame_shift_del	c.1119	p.G375fs	0.008	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FZR1	HGNC	ENSG00000105325				53	0	0	20	13	39.3939
RYR1	0	genome.wustl.edu	37	19	39068674	39068675	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	39068674	39068675	-	G	INS	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	frame_shift_ins	c.14289_14290	p.L4764fs	0.006:1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				32	0	0	34	17	33.3333
LTBP4	0	genome.wustl.edu	37	19	41117787	41117787	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	41117787	41117787	C	-	DEL	LTBP4	ENST00000308370	human	ensembl	74_37	+1	known	frame_shift_del	c.2277	p.P761fs	0.632	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006				14	0	0	11	9	45
PVR	0	genome.wustl.edu	37	19	45153247	45153248	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	45153247	45153248	CA	-	DEL	PVR	ENST00000425690	human	ensembl	74_37	+1	known	frame_shift_del	c.594_595	p.T199fs	1.000:1.000	pfam_CD80_C2-set,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVR	HGNC	ENSG00000073008				58	0	0	61	26	29.8851
TICAM1	0	genome.wustl.edu	37	19	4816465	4816465	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	4816465	4816465	G	-	DEL	TICAM1	ENST00000248244	human	ensembl	74_37	-1	known	frame_shift_del	c.1925	p.P642fs	0.003	pirsf_TICAM1	superfamily_TIR_dom,pirsf_TICAM1	-	no_errors	TICAM1	HGNC	ENSG00000127666				31	0	0	29	16	35.5556
SYNGR4	0	genome.wustl.edu	37	19	48879543	48879544	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	48879543	48879544	-	C	INS	SYNGR4	ENST00000344846	human	ensembl	74_37	+1	known	frame_shift_ins	c.673_674	p.R227fs	0.267:0.006	pirsf_Synaptogyrin	pfam_Marvel,pirsf_Synaptogyrin	-	no_errors	SYNGR4	HGNC	ENSG00000105467				59	0	0	45	23	33.8235
BAX	0	genome.wustl.edu	37	19	49458971	49458971	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	49458971	49458971	G	-	DEL	BAX	ENST00000293288	human	ensembl	74_37	+1	known	frame_shift_del	c.114	p.E41fs	0.588	NULL	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	-	no_errors	BAX	HGNC	ENSG00000087088				76	0	0	47	34	41.9753
TEAD2	0	genome.wustl.edu	37	19	49850473	49850473	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	49850473	49850473	G	-	DEL	TEAD2	ENST00000311227	human	ensembl	74_37	-1	known	frame_shift_del	c.883	p.H295fs	0.961	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD2	HGNC	ENSG00000074219				187	0	0	179	66	26.9388
PRR12	0	genome.wustl.edu	37	19	50102880	50102880	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	50102880	50102880	G	-	DEL	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	frame_shift_del	c.4030	p.G1345fs	0.999	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464				17	0	0	10	8	44.4444
ZNF587B	0	genome.wustl.edu	37	19	58353877	58353877	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	58353877	58353877	A	-	DEL	ZNF587B	ENST00000594901	human	ensembl	74_37	+1	novel	frame_shift_del	c.1835	p.K614fs	0.973	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF587B	HGNC	ENSG00000269343				32	0	0	26	9	25.7143
FBN3	0	genome.wustl.edu	37	19	8196625	8196625	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	19	8196625	8196625	C	-	DEL	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	frame_shift_del	c.1803	p.L602fs	0.999	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449				50	0	0	29	8	21.6216
TAF1B	0	genome.wustl.edu	37	2	10059788	10059788	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	10059788	10059788	A	-	DEL	TAF1B	ENST00000263663	human	ensembl	74_37	+1	known	frame_shift_del	c.1404	p.S471fs	0.003	NULL	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750				67	0	0	50	9	15.2542
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				92	0	0	16	54	77.1429
TTN-AS1	0	genome.wustl.edu	37	2	179392052	179392052	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	179392052	179392052	A	-	DEL	TTN-AS1	ENST00000587576	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	TTN-AS1	HGNC	ENSG00000237298				25	0	0	18	7	28
TTN	0	genome.wustl.edu	37	2	179395589	179395589	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	179395589	179395589	T	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.98049	p.K32683fs	0.909	superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				64	0	0	40	28	41.1765
TTN	0	genome.wustl.edu	37	2	179517790	179517790	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	179517790	179517790	T	-	DEL	TTN	ENST00000589042	human	ensembl	74_37	-1	putative	frame_shift_del	c.38853	p.K12951fs	0.998	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_PPAK_motif,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				141	0	0	70	24	25.5319
AOX1	0	genome.wustl.edu	37	2	201473949	201473949	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	201473949	201473949	A	-	DEL	AOX1	ENST00000465297	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	AOX1	HGNC	ENSG00000138356				21	0	0	16	4	20
SLC4A3	0	genome.wustl.edu	37	2	220494110	220494111	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	220494110	220494111	-	C	INS	SLC4A3	ENST00000273063	human	ensembl	74_37	+1	known	frame_shift_ins	c.462_463	p.H156fs	0.015:0.049	prints_Anion_exchange_3	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange_3,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A3	HGNC	ENSG00000114923				24	0	0	13	5	27.7778
SP100	0	genome.wustl.edu	37	2	231326044	231326044	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	231326044	231326044	A	-	DEL	SP100	ENST00000340126	human	ensembl	74_37	+1	known	frame_shift_del	c.888	p.K298fs	0.995	NULL	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP100	HGNC	ENSG00000067066				57	0	0	31	18	36.7347
LTBP1	0	genome.wustl.edu	37	2	33590553	33590554	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	33590553	33590554	-	C	INS	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	frame_shift_ins	c.4697_4698	p.L1568fs	1.000:1.000	pfam_TB_dom,superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323				42	0	0	28	32	53.3333
ZFP36L2	0	genome.wustl.edu	37	2	43452885	43452886	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	43452885	43452886	TC	-	DEL	ZFP36L2	ENST00000282388	human	ensembl	74_37	-1	known	frame_shift_del	c.58_57	p.K20fs	1.000:1.000	pfam_Tis11B_N	pfam_Tis11B_N,pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZFP36L2	HGNC	ENSG00000152518				28	0	0	19	10	34.4828
LHCGR	0	genome.wustl.edu	37	2	48915172	48915172	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	48915172	48915172	A	-	DEL	LHCGR	ENST00000294954	human	ensembl	74_37	-1	known	frame_shift_del	c.1764	p.F588fs	1.000	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_LSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	LHCGR	HGNC	ENSG00000138039				96	0	0	34	20	37.037
NRXN1	0	genome.wustl.edu	37	2	50574000	50574001	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	50574000	50574001	-	C	INS	NRXN1	ENST00000342183	human	ensembl	74_37	-1	known	frame_shift_ins	c.88_87	p.R29fs	1.000:1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Neurexin-like,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				11	0	0	8	8	50
ETAA1	0	genome.wustl.edu	37	2	67629928	67629928	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	67629928	67629928	T	-	DEL	ETAA1	ENST00000462772	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.156	-	-	-	no_errors	ETAA1	HGNC	ENSG00000143971				39	0	0	13	16	55.1724
VAX2	0	genome.wustl.edu	37	2	71160188	71160188	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	71160188	71160188	C	-	DEL	VAX2	ENST00000234392	human	ensembl	74_37	+1	known	frame_shift_del	c.727	p.P244fs	0.997	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	VAX2	HGNC	ENSG00000116035				31	0	0	21	17	44.7368
GGCX	0	genome.wustl.edu	37	2	85780733	85780733	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	85780733	85780733	T	-	DEL	GGCX	ENST00000482662	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.004	-	-	-	no_errors	GGCX	HGNC	ENSG00000115486				16	0	0	14	5	26.3158
ANKRD20A8P	0	genome.wustl.edu	37	2	95483039	95483039	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	95483039	95483039	T	-	DEL	ANKRD20A8P	ENST00000432432	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.232	-	-	-	no_errors	ANKRD20A8P	HGNC	ENSG00000229089				53	0	0	19	6	24
EIF5B	0	genome.wustl.edu	37	2	99976805	99976805	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	2	99976805	99976805	A	-	DEL	EIF5B	ENST00000289371	human	ensembl	74_37	+1	known	frame_shift_del	c.142	p.K50fs	1.000	NULL	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_TIF_IF2_dom3,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417				26	0	0	9	9	50
NDUFAF5	0	genome.wustl.edu	37	20	13789596	13789596	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	13789596	13789596	A	-	DEL	NDUFAF5	ENST00000464269	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NDUFAF5	HGNC	ENSG00000101247				21	0	0	18	7	28
CST1	0	genome.wustl.edu	37	20	23729753	23729754	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	23729753	23729754	-	C	INS	CST1	ENST00000304749	human	ensembl	74_37	-1	known	frame_shift_ins	c.242_241	p.V81fs	0.004:0.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST1	HGNC	ENSG00000170373				170	1	0.584795	83	45	35.1562
CST1	0	genome.wustl.edu	37	20	23729754	23729754	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	23729754	23729754	C	-	DEL	CST1	ENST00000304749	human	ensembl	74_37	-1	known	frame_shift_del	c.241	p.V81fs	0.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST1	HGNC	ENSG00000170373				171	0	0	98	30	23.4375
BPIFB4	0	genome.wustl.edu	37	20	31671214	31671214	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	31671214	31671214	C	-	DEL	BPIFB4	ENST00000375483	human	ensembl	74_37	+1	known	frame_shift_del	c.211	p.P73fs	0.030	NULL	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB4	HGNC	ENSG00000186191				97	0	0	100	14	12.2807
MIR644A	0	genome.wustl.edu	37	20	33054129	33054130	+	RNA	INS	-	-	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	33054129	33054130	-	T	INS	MIR644A	ENST00000385262	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.024:0.030	-	-	-	no_errors	MIR644A	HGNC	ENSG00000207997				32	0	0	6	7	53.8462
TP53INP2	0	genome.wustl.edu	37	20	33296586	33296586	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	33296586	33296586	C	-	DEL	TP53INP2	ENST00000374809	human	ensembl	74_37	+1	known	frame_shift_del	c.43	p.E17fs	0.030	NULL	NULL	-	no_errors	TP53INP2	HGNC	ENSG00000078804				9	0	0	10	6	37.5
RALGAPB	0	genome.wustl.edu	37	20	37146233	37146233	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	37146233	37146233	C	-	DEL	RALGAPB	ENST00000262879	human	ensembl	74_37	+1	known	frame_shift_del	c.1136	p.P381fs	1.000	NULL	superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPB	HGNC	ENSG00000170471				87	0	0	69	35	33.6538
PTPRT	0	genome.wustl.edu	37	20	40739003	40739003	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	40739003	40739003	G	-	DEL	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	frame_shift_del	c.3281	p.P1094fs	0.991	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				43	0	0	48	12	20
CD40	0	genome.wustl.edu	37	20	44757522	44757522	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	44757522	44757522	C	-	DEL	CD40	ENST00000372285	human	ensembl	74_37	+1	known	frame_shift_del	c.677	p.H228fs	0.001	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_5,prints_Fas_rcpt	-	no_errors	CD40	HGNC	ENSG00000101017				48	0	0	40	15	27.2727
RAE1	0	genome.wustl.edu	37	20	55953093	55953093	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	55953093	55953093	A	-	DEL	RAE1	ENST00000371242	human	ensembl	74_37	+1	known	frame_shift_del	c.1045	p.N351fs	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RAE1	HGNC	ENSG00000101146				30	0	0	13	3	18.75
PCK1	0	genome.wustl.edu	37	20	56140815	56140816	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	56140815	56140816	-	GA	INS	PCK1	ENST00000319441	human	ensembl	74_37	+1	known	frame_shift_ins	c.1824_1825	p.I611fs	0.272:0.285	pfam_PEP_carboxykinase_GTP,pirsf_PEP_carboxykinase_GTP	pfam_PEP_carboxykinase_GTP,superfamily_PEP_carboxykinase_N,pirsf_PEP_carboxykinase_GTP	-	no_errors	PCK1	HGNC	ENSG00000124253				58	0	0	15	9	37.5
DIDO1	0	genome.wustl.edu	37	20	61512074	61512074	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	20	61512074	61512074	C	-	DEL	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	frame_shift_del	c.5234	p.G1745fs	0.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191				102	1	0.970874	91	46	33.5766
BAGE2	0	genome.wustl.edu	37	21	11039238	11039238	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	11039238	11039238	T	-	DEL	BAGE2	ENST00000470054	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BAGE2	HGNC	ENSG00000187172				267	0	0	223	14	5.90717
CYYR1	0	genome.wustl.edu	37	21	27840847	27840848	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	27840847	27840848	-	G	INS	CYYR1	ENST00000299340	human	ensembl	74_37	-1	known	frame_shift_ins	c.438_437	p.P147fs	1.000:1.000	pfam_CYYR1	pfam_CYYR1	-	no_errors	CYYR1	HGNC	ENSG00000166265				41	0	0	36	11	23.4043
TCP10L	0	genome.wustl.edu	37	21	33949091	33949091	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	33949091	33949091	C	-	DEL	TCP10L	ENST00000300258	human	ensembl	74_37	-1	known	frame_shift_del	c.641	p.G214fs	0.003	NULL	NULL	-	no_errors	TCP10L	HGNC	ENSG00000242220				112	0	0	67	25	27.1739
TTC3	0	genome.wustl.edu	37	21	38512963	38512963	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	38512963	38512963	A	-	DEL	TTC3	ENST00000354749	human	ensembl	74_37	+1	known	frame_shift_del	c.1762	p.N590fs	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like_dom,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670				76	0	0	43	24	35.8209
TTC3	0	genome.wustl.edu	37	21	38524243	38524243	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	38524243	38524243	A	-	DEL	TTC3	ENST00000354749	human	ensembl	74_37	+1	known	frame_shift_del	c.2327	p.E779fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like_dom,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670				69	0	0	28	12	30
COL18A1	0	genome.wustl.edu	37	21	46916425	46916425	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	21	46916425	46916425	C	-	DEL	COL18A1	ENST00000359759	human	ensembl	74_37	+1	known	frame_shift_del	c.3765	p.P1257fs	0.614	pfam_Collagen	pfam_Collagenase_NC10/endostatin,pfam_DUF959_COL18_N,pfam_Collagen,pfam_Frizzled_dom,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,superfamily_Frizzled_dom,smart_Frizzled_dom,smart_Laminin_G,pfscan_Frizzled_dom	-	no_errors	COL18A1	HGNC	ENSG00000182871				71	0	0	71	34	32.381
MICAL3	0	genome.wustl.edu	37	22	18300311	18300311	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	18300311	18300311	G	-	DEL	MICAL3	ENST00000441493	human	ensembl	74_37	-1	known	frame_shift_del	c.5116	p.R1706fs	0.990	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156				17	0	0	10	9	47.3684
TSSK2	0	genome.wustl.edu	37	22	19119732	19119732	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	19119732	19119732	C	-	DEL	TSSK2	ENST00000399635	human	ensembl	74_37	+1	known	frame_shift_del	c.820	p.K276fs	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TSSK2	HGNC	ENSG00000206203				84	0	0	96	12	11.1111
PI4KA	0	genome.wustl.edu	37	22	21188945	21188946	+	Splice_Site	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	21188945	21188946	-	A	INS	PI4KA	ENST00000255882	human	ensembl	74_37	-1	known	splice_site_ins	c.274-3_274-2	e3-2	1.000:0.031	-	-	-	no_errors	PI4KA	HGNC	ENSG00000241973				59	0	0	43	21	32.8125
ENSG00000234353	0	genome.wustl.edu	37	22	23982670	23982670	+	RNA	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	23982670	23982670	G	-	DEL	ENSG00000234353	ENST00000430707	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	AP000347.4	Clone_based_vega_gene	ENSG00000234353				23	0	0	19	12	38.7097
TIMP3	0	genome.wustl.edu	37	22	33255323	33255324	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	33255323	33255324	-	C	INS	TIMP3	ENST00000266085	human	ensembl	74_37	+1	known	frame_shift_ins	c.595_596	p.D202fs	1.000:0.990	NULL	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	-	no_errors	TIMP3	HGNC	ENSG00000100234				26	0	0	26	14	35
HMGXB4	0	genome.wustl.edu	37	22	35661544	35661544	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	35661544	35661544	A	-	DEL	HMGXB4	ENST00000216106	human	ensembl	74_37	+1	known	frame_shift_del	c.1163	p.K391fs	1.000	superfamily_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	HMGXB4	HGNC	ENSG00000100281				41	0	0	41	7	14.5833
MYH9	0	genome.wustl.edu	37	22	36737461	36737462	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	36737461	36737462	-	G	INS	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	frame_shift_ins	c.444_443	p.H149fs	0.197:1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345				84	0	0	64	20	23.8095
CELSR1	0	genome.wustl.edu	37	22	46931227	46931227	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	22	46931227	46931227	C	-	DEL	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	frame_shift_del	c.1841	p.G614fs	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				34	0	0	14	38	73.0769
GOLGB1	0	genome.wustl.edu	37	3	121413503	121413503	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	121413503	121413503	T	-	DEL	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	frame_shift_del	c.5852	p.N1951fs	1.000	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230				166	0	0	151	54	26.3415
EAF2	0	genome.wustl.edu	37	3	121573659	121573659	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	121573659	121573659	A	-	DEL	EAF2	ENST00000273668	human	ensembl	74_37	+1	known	frame_shift_del	c.327	p.T112fs	0.970	pfam_Tscrpt_elong_fac_Eaf_N	pfam_Tscrpt_elong_fac_Eaf_N	-	no_errors	EAF2	HGNC	ENSG00000145088				69	0	0	43	16	27.1186
ACAD11	0	genome.wustl.edu	37	3	132298379	132298379	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	132298379	132298379	T	-	DEL	ACAD11	ENST00000264990	human	ensembl	74_37	-1	known	frame_shift_del	c.1645	p.I549fs	1.000	pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase_NM_dom	pfam_Aminoglycoside_PTrfase,pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,pfam_AcylCoA_DH/ox_N,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C,superfamily_Kinase-like_dom	-	no_errors	ACAD11	HGNC	ENSG00000240303				56	0	0	45	11	19.6429
SLC35G2	0	genome.wustl.edu	37	3	136573486	136573486	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	136573486	136573486	A	-	DEL	SLC35G2	ENST00000393079	human	ensembl	74_37	+1	known	frame_shift_del	c.184	p.66fs	1.000	NULL	pfam_DMT	-	no_errors	SLC35G2	HGNC	ENSG00000168917				119	0	0	57	66	53.6585
MED12L	0	genome.wustl.edu	37	3	150877786	150877786	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	150877786	150877786	C	-	DEL	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	frame_shift_del	c.1005	p.G338fs	0.269	pfam_Mediator_Med12_LCEWAV	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893				133	0	0	213	85	28.5235
GPR171	0	genome.wustl.edu	37	3	150917110	150917110	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	150917110	150917110	A	-	DEL	GPR171	ENST00000309180	human	ensembl	74_37	-1	known	frame_shift_del	c.64	p.Y22fs	1.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR171	HGNC	ENSG00000174946				48	0	0	47	17	26.5625
GPR149	0	genome.wustl.edu	37	3	154145305	154145305	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	154145305	154145305	T	-	DEL	GPR149	ENST00000389740	human	ensembl	74_37	-1	known	frame_shift_del	c.1174	p.I392fs	0.909	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR149	HGNC	ENSG00000174948				42	0	0	40	18	31.0345
VEPH1	0	genome.wustl.edu	37	3	157081227	157081227	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	157081227	157081227	T	-	DEL	VEPH1	ENST00000362010	human	ensembl	74_37	-1	known	frame_shift_del	c.1661	p.N554fs	1.000	NULL	pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	VEPH1	HGNC	ENSG00000197415				130	1	0.763359	124	44	26.1905
LRRC31	0	genome.wustl.edu	37	3	169579523	169579523	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	169579523	169579523	T	-	DEL	LRRC31	ENST00000316428	human	ensembl	74_37	-1	known	frame_shift_del	c.254	p.K85fs	0.003	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC31	HGNC	ENSG00000114248				157	0	0	152	55	26.57
SDHAP1	0	genome.wustl.edu	37	3	195709193	195709193	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	195709193	195709193	A	-	DEL	SDHAP1	ENST00000413474	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.759	-	-	-	no_errors	SDHAP1	HGNC	ENSG00000185485				49	0	0	82	6	6.81818
SGOL1	0	genome.wustl.edu	37	3	20216050	20216050	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	20216050	20216050	T	-	DEL	SGOL1	ENST00000263753	human	ensembl	74_37	-1	known	frame_shift_del	c.973	p.M325fs	0.000	NULL	pfam_Shugoshin_N,pfam_Shugoshin_C	-	no_errors	SGOL1	HGNC	ENSG00000129810				37	0	0	23	7	23.3333
TRANK1	0	genome.wustl.edu	37	3	36876253	36876253	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	36876253	36876253	T	-	DEL	TRANK1	ENST00000429976	human	ensembl	74_37	-1	known	frame_shift_del	c.5531	p.K1844fs	1.000	NULL	pfam_UvrD-like_ATP-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom	-	no_errors	TRANK1	HGNC	ENSG00000168016				48	0	0	44	17	27.8689
LRRFIP2	0	genome.wustl.edu	37	3	37114286	37114286	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	37114286	37114286	T	-	DEL	LRRFIP2	ENST00000336686	human	ensembl	74_37	-1	known	frame_shift_del	c.1459	p.I487fs	1.000	pfam_Leu-rich_rep_flightless-int_pr,superfamily_bHLH_dom	pfam_Leu-rich_rep_flightless-int_pr,superfamily_bHLH_dom,superfamily_Prefoldin	-	no_errors	LRRFIP2	HGNC	ENSG00000093167				60	0	0	60	20	25
ENSG00000271941	0	genome.wustl.edu	37	3	43388801	43388801	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	43388801	43388801	T	-	DEL	ENSG00000271941	ENST00000607513	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-188P20.3	Clone_based_vega_gene	ENSG00000271941				114	0	0	113	41	26.6234
KIAA1143	0	genome.wustl.edu	37	3	44795778	44795778	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	44795778	44795778	T	-	DEL	KIAA1143	ENST00000296121	human	ensembl	74_37	-1	known	frame_shift_del	c.191	p.K64fs	1.000	NULL	NULL	-	no_errors	KIAA1143	HGNC	ENSG00000163807				78	0	0	64	23	26.4368
MAPKAPK3	0	genome.wustl.edu	37	3	50655080	50655080	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	50655080	50655080	G	-	DEL	MAPKAPK3	ENST00000357955	human	ensembl	74_37	+1	known	frame_shift_del	c.84	p.R31fs	0.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPKAPK3	HGNC	ENSG00000114738				75	0	0	120	36	23.0769
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				38	0	0	69	18	20.6897
ENSG00000271976	0	genome.wustl.edu	37	3	53894307	53894308	+	RNA	INS	-	-	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	53894307	53894308	-	T	INS	ENSG00000271976	ENST00000607783	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.002	-	-	-	no_errors	RP11-884K10.7	Clone_based_vega_gene	ENSG00000271976				43	0	0	61	16	20.7792
FOXP1	0	genome.wustl.edu	37	3	71008342	71008342	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	71008342	71008342	T	-	DEL	FOXP1	ENST00000460805	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.439	-	-	-	no_errors	FOXP1	HGNC	ENSG00000114861				49	0	0	31	40	56.338
BRPF1	0	genome.wustl.edu	37	3	9786078	9786078	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	3	9786078	9786078	C	-	DEL	BRPF1	ENST00000383829	human	ensembl	74_37	+1	known	frame_shift_del	c.2806	p.Q938fs	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRPF1	HGNC	ENSG00000156983				26	0	0	25	12	32.4324
ANK2	0	genome.wustl.edu	37	4	114274959	114274959	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	114274959	114274959	A	-	DEL	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	frame_shift_del	c.5185	p.G1731fs	0.083	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				260	0	0	197	107	35.1974
BBS12	0	genome.wustl.edu	37	4	123664721	123664722	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	123664721	123664722	-	A	INS	BBS12	ENST00000314218	human	ensembl	74_37	+1	known	frame_shift_ins	c.1674_1675	p.E560fs	0.000:0.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	-	no_errors	BBS12	HGNC	ENSG00000181004				79	0	0	31	18	36.7347
PROM1	0	genome.wustl.edu	37	4	15995680	15995680	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	15995680	15995680	T	-	DEL	PROM1	ENST00000447510	human	ensembl	74_37	-1	known	frame_shift_del	c.1697	p.N566fs	0.415	pfam_Prominin	pfam_Prominin	-	no_errors	PROM1	HGNC	ENSG00000007062				61	0	0	46	17	26.9841
TENM3	0	genome.wustl.edu	37	4	183714567	183714567	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	183714567	183714567	T	-	DEL	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	frame_shift_del	c.6742	p.Y2250fs	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336				52	0	0	23	10	30.303
CCDC110	0	genome.wustl.edu	37	4	186379943	186379943	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	186379943	186379943	T	-	DEL	CCDC110	ENST00000307588	human	ensembl	74_37	-1	known	frame_shift_del	c.1798	p.S600fs	0.015	NULL	superfamily_4_helix_cytokine-like_core	-	no_errors	CCDC110	HGNC	ENSG00000168491				59	0	0	33	17	34
SORBS2	0	genome.wustl.edu	37	4	186515044	186515044	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	186515044	186515044	C	-	DEL	SORBS2	ENST00000284776	human	ensembl	74_37	-1	known	frame_shift_del	c.3130	p.E1044fs	1.000	superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556				69	0	0	40	12	23.0769
FAM193A	0	genome.wustl.edu	37	4	2661593	2661593	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	2661593	2661593	C	-	DEL	FAM193A	ENST00000324666	human	ensembl	74_37	+1	known	frame_shift_del	c.684	p.V231fs	0.995	NULL	NULL	-	no_errors	FAM193A	HGNC	ENSG00000125386				134	0	0	84	59	41.2587
HTT	0	genome.wustl.edu	37	4	3133117	3133117	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	3133117	3133117	A	-	DEL	HTT	ENST00000355072	human	ensembl	74_37	+1	known	frame_shift_del	c.2091	p.N699fs	0.273	superfamily_ARM-type_fold	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386				56	0	0	22	10	31.25
HGFAC	0	genome.wustl.edu	37	4	3445854	3445854	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	3445854	3445854	C	-	DEL	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	frame_shift_del	c.564	p.R190fs	1.000	pirsf_Coagulation_fac_XIIa/HGFA,pfam_EG-like_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758				30	0	0	21	6	22.2222
TLR6	0	genome.wustl.edu	37	4	38830974	38830974	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	38830974	38830974	T	-	DEL	TLR6	ENST00000381950	human	ensembl	74_37	-1	known	frame_shift_del	c.121	p.R41fs	0.001	pirsf_Toll-like_receptor	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,pfam_Cys-rich_flank_reg_C,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR6	HGNC	ENSG00000174130				125	0	0	70	21	23.0769
N4BP2	0	genome.wustl.edu	37	4	40144449	40144449	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	40144449	40144449	A	-	DEL	N4BP2	ENST00000261435	human	ensembl	74_37	+1	known	frame_shift_del	c.4942	p.N1650fs	0.548	pfam_DUF1771	pfam_DUF1771,pfam_Smr/MutS2_C,superfamily_P-loop_NTPase,superfamily_UBA-like,smart_Smr/MutS2_C,pfscan_CUE,pfscan_Smr/MutS2_C	-	no_errors	N4BP2	HGNC	ENSG00000078177				65	0	0	34	20	37.037
KIAA1211	0	genome.wustl.edu	37	4	57179503	57179503	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	57179503	57179503	A	-	DEL	KIAA1211	ENST00000504228	human	ensembl	74_37	+1	known	frame_shift_del	c.495	p.K167fs	0.997	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265				94	0	0	78	50	39.0625
AFF1	0	genome.wustl.edu	37	4	88035872	88035872	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	88035872	88035872	G	-	DEL	AFF1	ENST00000395146	human	ensembl	74_37	+1	known	frame_shift_del	c.1887	p.E631fs	0.481	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF1	HGNC	ENSG00000172493				64	0	0	73	12	14.1176
GRID2	0	genome.wustl.edu	37	4	93225753	93225754	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	93225753	93225754	AA	-	DEL	GRID2	ENST00000505687	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	GRID2	HGNC	ENSG00000152208				29	0	0	15	5	25
BMPR1B	0	genome.wustl.edu	37	4	96025646	96025646	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	4	96025646	96025646	C	-	DEL	BMPR1B	ENST00000440890	human	ensembl	74_37	+1	known	frame_shift_del	c.161	p.R56fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	BMPR1B	HGNC	ENSG00000138696				67	0	0	34	25	42.3729
MCC	0	genome.wustl.edu	37	5	112487025	112487025	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	112487025	112487025	T	-	DEL	MCC	ENST00000302475	human	ensembl	74_37	-1	known	frame_shift_del	c.152	p.K51fs	1.000	NULL	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm	-	no_errors	MCC	HGNC	ENSG00000171444				31	0	0	19	7	26.9231
BRD8	0	genome.wustl.edu	37	5	137505020	137505021	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	137505020	137505021	-	G	INS	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	frame_shift_ins	c.533_532	p.R178fs	1.000:1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983				70	0	0	55	17	23.6111
KIF20A	0	genome.wustl.edu	37	5	137519413	137519413	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	137519413	137519413	G	-	DEL	KIF20A	ENST00000394894	human	ensembl	74_37	+1	known	frame_shift_del	c.1176	p.E394fs	0.956	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF20A	HGNC	ENSG00000112984				42	0	0	18	9	33.3333
TRIO	0	genome.wustl.edu	37	5	14387627	14387627	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	14387627	14387627	A	-	DEL	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	frame_shift_del	c.3651	p.K1219fs	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382				118	0	0	53	36	40.4494
RBM27	0	genome.wustl.edu	37	5	145647320	145647320	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	145647320	145647320	A	-	DEL	RBM27	ENST00000265271	human	ensembl	74_37	+1	known	frame_shift_del	c.2440	p.K816fs	1.000	NULL	pfam_PWI_dom,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009				65	0	0	28	25	47.1698
SPINK5	0	genome.wustl.edu	37	5	147499875	147499875	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	147499875	147499875	A	-	DEL	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	frame_shift_del	c.2459	p.K823fs	0.998	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710				17	0	0	4	4	50
SLC6A7	0	genome.wustl.edu	37	5	149580755	149580755	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	149580755	149580755	C	-	DEL	SLC6A7	ENST00000230671	human	ensembl	74_37	+1	known	frame_shift_del	c.827	p.Q278fs	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A7	HGNC	ENSG00000011083				78	0	0	38	24	38.7097
MIR1303	0	genome.wustl.edu	37	5	154065370	154065370	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	154065370	154065370	T	-	DEL	MIR1303	ENST00000408625	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR1303	HGNC	ENSG00000221552				38	0	0	21	14	40
LOC101928649	0	genome.wustl.edu	37	5	180684515	180684516	+	RNA	INS	-	-	T			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	180684515	180684516	-	T	INS	LOC101928649	ENST00000417281	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.030:0.042	-	-	-	no_errors	CTC-338M12.4	Clone_based_vega_gene	ENSG00000233937				28	0	0	22	12	35.2941
PDZD2	0	genome.wustl.edu	37	5	31799656	31799657	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	31799656	31799657	-	G	INS	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	frame_shift_ins	c.301_302	p.K104fs	1.000:1.000	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				91	0	0	85	32	27.3504
NIPBL	0	genome.wustl.edu	37	5	36995693	36995693	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	36995693	36995693	T	-	DEL	NIPBL	ENST00000503274	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.879	-	-	-	no_errors	NIPBL	HGNC	ENSG00000164190				29	0	0	19	12	38.7097
MSH3	0	genome.wustl.edu	37	5	79970915	79970915	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	5	79970915	79970915	A	-	DEL	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	frame_shift_del	c.1141	p.K383fs	0.982	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318				161	0	0	63	34	35.0515
ASCC3	0	genome.wustl.edu	37	6	101296336	101296336	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	101296336	101296336	A	-	DEL	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	frame_shift_del	c.489	p.F163fs	1.000	NULL	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249				67	0	0	37	13	26
TRDN	0	genome.wustl.edu	37	6	123759209	123759209	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	123759209	123759209	T	-	DEL	TRDN	ENST00000398178	human	ensembl	74_37	-1	known	frame_shift_del	c.1050	p.E351fs	1.000	NULL	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	TRDN	HGNC	ENSG00000186439				11	0	0	7	4	36.3636
HEY2	0	genome.wustl.edu	37	6	126080802	126080802	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	126080802	126080802	C	-	DEL	HEY2	ENST00000368364	human	ensembl	74_37	+1	known	frame_shift_del	c.868	p.P291fs	0.877	NULL	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,smart_Orange_subgr,pfscan_Orange,pfscan_bHLH_dom,prints_Antifreeze_1	-	no_errors	HEY2	HGNC	ENSG00000135547				175	0	0	195	125	39.0625
ENSG00000227678	0	genome.wustl.edu	37	6	130454856	130454856	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	130454856	130454856	T	-	DEL	ENSG00000227678	ENST00000415964	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.125	-	-	-	no_errors	RP11-73O6.3	Clone_based_vega_gene	ENSG00000227678				22	0	0	7	4	36.3636
AKAP7	0	genome.wustl.edu	37	6	131481276	131481276	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	131481276	131481276	A	-	DEL	AKAP7	ENST00000368123	human	ensembl	74_37	+1	known	frame_shift_del	c.163	p.K57fs	0.449	pfam_Kinase-A_anchor_nucl_local_sig	pfam_Kinase-A_anchor_nucl_local_sig,pfam_Kinase-A_anchor_RI-RII-bd_dom,superfamily_RNA_ligase/cNuc_Pdiesterase	-	no_errors	AKAP7	HGNC	ENSG00000118507				51	0	0	16	9	36
WTAP	0	genome.wustl.edu	37	6	160163106	160163106	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	160163106	160163106	T	-	DEL	WTAP	ENST00000462110	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	WTAP	HGNC	ENSG00000146457				29	0	0	16	6	27.2727
TCP1	0	genome.wustl.edu	37	6	160208919	160208920	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	160208919	160208920	-	A	INS	TCP1	ENST00000538530	human	ensembl	74_37	-1	known	frame_shift_ins	c.166_165	p.P55fs	0.000:0.000	NULL	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1	-	no_errors	TCP1	HGNC	ENSG00000120438				63	0	0	25	16	39.0244
QKI	0	genome.wustl.edu	37	6	163899919	163899920	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	163899919	163899920	-	A	INS	QKI	ENST00000361752	human	ensembl	74_37	+1	known	frame_shift_ins	c.393_394	p.E134fs	1.000:1.000	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	QKI	HGNC	ENSG00000112531				70	0	0	49	23	31.9444
GABBR1	0	genome.wustl.edu	37	6	29577144	29577144	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	29577144	29577144	G	-	DEL	GABBR1	ENST00000377034	human	ensembl	74_37	-1	known	frame_shift_del	c.1721	p.P574fs	1.000	superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Sushi_SCR_CCP,superfamily_Peripla_BP_I,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,pfscan_Sushi_SCR_CCP,pfscan_GPCR_3_C	-	no_errors	GABBR1	HGNC	ENSG00000204681				44	0	0	35	10	22.2222
EHMT2	0	genome.wustl.edu	37	6	31864763	31864763	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	31864763	31864763	C	-	DEL	EHMT2	ENST00000395728	human	ensembl	74_37	-1	known	frame_shift_del	c.217	p.E73fs	1.000	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT2	HGNC	ENSG00000204371				105	0	0	91	47	34.058
GPSM3	0	genome.wustl.edu	37	6	32160020	32160020	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	32160020	32160020	G	-	DEL	GPSM3	ENST00000375040	human	ensembl	74_37	-1	known	frame_shift_del	c.50	p.P17fs	0.086	NULL	pfam_GoLoco_motif,smart_GoLoco_motif,pfscan_GoLoco_motif	-	no_errors	GPSM3	HGNC	ENSG00000213654				33	0	0	27	19	41.3043
GLTSCR1L	0	genome.wustl.edu	37	6	42832627	42832627	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	42832627	42832627	A	-	DEL	GLTSCR1L	ENST00000314073	human	ensembl	74_37	+1	known	frame_shift_del	c.2683	p.T897fs	1.000	NULL	NULL	-	no_errors	GLTSCR1L	HGNC	ENSG00000112624				54	0	0	38	14	26.9231
CYB5R4	0	genome.wustl.edu	37	6	84634230	84634231	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	6	84634230	84634231	-	A	INS	CYB5R4	ENST00000369681	human	ensembl	74_37	+1	known	frame_shift_ins	c.733_734	p.E248fs	0.390:0.868	superfamily_HSP20-like_chaperone,pfscan_CS_dom	pfam_Cyt_B5-like_heme/steroid-bd,pfam_OxRdtase_FAD-bd_dom,pfam_OxRdtase_FAD/NAD-bd,pfam_CS_dom,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_Riboflavin_synthase-like_b-brl,superfamily_HSP20-like_chaperone,pfscan_CS_dom,pfscan_Cyt_B5-like_heme/steroid-bd,prints_NADH-Cyt_B5_reductase,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	CYB5R4	HGNC	ENSG00000065615				72	0	0	32	24	42.8571
MUC17	0	genome.wustl.edu	37	7	100676652	100676654	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	100676652	100676654	CTC	-	DEL	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	in_frame_del	c.1955_1957	p.P653in_frame_del	0.012:0.002:0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				525	0	0	253	106	29.5265
RELN	0	genome.wustl.edu	37	7	103301976	103301977	+	Splice_Site	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	103301976	103301977	-	A	INS	RELN	ENST00000424685	human	ensembl	74_37	-1	known	splice_site_ins	c.1290-3_1290-2	e12-2	0.999:0.009	-	-	-	no_errors	RELN	HGNC	ENSG00000189056				37	0	0	24	8	25
CPA4	0	genome.wustl.edu	37	7	129950720	129950720	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	129950720	129950720	A	-	DEL	CPA4	ENST00000222482	human	ensembl	74_37	+1	known	frame_shift_del	c.887	p.K297fs	0.007	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA4	HGNC	ENSG00000128510				122	0	0	125	45	26.4706
ARHGEF35	0	genome.wustl.edu	37	7	143884068	143884068	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	143884068	143884068	A	-	DEL	ARHGEF35	ENST00000378115	human	ensembl	74_37	-1	known	frame_shift_del	c.1409	p.L470fs	0.001	NULL	NULL	-	no_errors	ARHGEF35	HGNC	ENSG00000213214				32	0	0	19	8	29.6296
SSPO	0	genome.wustl.edu	37	7	149502564	149502564	+	RNA	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	149502564	149502564	G	-	DEL	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				45	0	0	51	6	10.5263
KMT2C	0	genome.wustl.edu	37	7	151845524	151845524	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	151845524	151845524	A	-	DEL	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	frame_shift_del	c.13659	p.F4553fs	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				151	0	0	72	40	35.7143
RAPGEF5	0	genome.wustl.edu	37	7	22197474	22197474	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	22197474	22197474	T	-	DEL	RAPGEF5	ENST00000344041	human	ensembl	74_37	-1	known	frame_shift_del	c.1097	p.K366fs	1.000	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF5	HGNC	ENSG00000136237				35	0	0	17	14	45.1613
ENSG00000225792	0	genome.wustl.edu	37	7	26411946	26411946	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	26411946	26411946	A	-	DEL	ENSG00000225792	ENST00000451368	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC004540.4	Clone_based_vega_gene	ENSG00000225792				22	0	0	8	6	42.8571
GARS	0	genome.wustl.edu	37	7	30634583	30634585	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	30634583	30634585	CTG	-	DEL	GARS	ENST00000389266	human	ensembl	74_37	+1	known	in_frame_del	c.46_48	p.L19in_frame_del	0.090:0.073:0.025	NULL	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_WHEP-TRS,superfamily_Anticodon-bd,superfamily_S15_NS1_RNA-bd,prints_tRNA-synt_gly,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_tRNA-synt_gly	-	no_errors	GARS	HGNC	ENSG00000106105				11	0	0	13	2	13.3333
POLM	0	genome.wustl.edu	37	7	44120414	44120414	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	44120414	44120414	G	-	DEL	POLM	ENST00000242248	human	ensembl	74_37	-1	known	frame_shift_del	c.290	p.P97fs	0.047	superfamily_BRCT_dom,pirsf_TdT/Mu,pfscan_BRCT_dom	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_DNA-dir_DNA_pol_X,pirsf_TdT/Mu,pfscan_BRCT_dom,prints_TdT/Mu,prints_DNA_pol_X,prints_DNA_pol_X_beta-like	-	no_errors	POLM	HGNC	ENSG00000122678				115	0	0	82	43	34.4
CASD1	0	genome.wustl.edu	37	7	94174999	94174999	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	94174999	94174999	A	-	DEL	CASD1	ENST00000297273	human	ensembl	74_37	+1	known	frame_shift_del	c.1619	p.A543fs	1.000	pfam_Cas1_AcylTrans_dom	pfam_Cas1_AcylTrans_dom,superfamily_Cyclin-like	-	no_errors	CASD1	HGNC	ENSG00000127995				35	0	0	16	7	30.4348
TAF6	0	genome.wustl.edu	37	7	99706154	99706155	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	7	99706154	99706155	CA	-	DEL	TAF6	ENST00000344095	human	ensembl	74_37	-1	known	frame_shift_del	c.1294_1293	p.A432fs	1.000:1.000	NULL	pfam_DUF1546,pfam_TAF_TATA-bd,superfamily_Histone-fold,superfamily_ARM-type_fold,smart_TAF_TATA-bd	-	no_errors	TAF6	HGNC	ENSG00000106290				90	0	0	77	48	38.4
VPS13B	0	genome.wustl.edu	37	8	100654474	100654474	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	100654474	100654474	A	-	DEL	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	frame_shift_del	c.5731	p.I1913fs	0.452	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				149	0	0	143	25	14.881
POLR2K	0	genome.wustl.edu	37	8	101164033	101164033	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	101164033	101164033	T	-	DEL	POLR2K	ENST00000519765	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	POLR2K	HGNC	ENSG00000147669				24	0	0	20	9	31.0345
UBR5	0	genome.wustl.edu	37	8	103289349	103289349	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	103289349	103289349	T	-	DEL	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	frame_shift_del	c.6360	p.E2121fs	0.987	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				93	0	0	114	79	40.9326
DCAF13	0	genome.wustl.edu	37	8	104439487	104439487	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	104439487	104439487	T	-	DEL	DCAF13	ENST00000519682	human	ensembl	74_37	+1	putative	frame_shift_del	c.619	p.F209fs	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF13	HGNC	ENSG00000164934				28	0	0	38	9	19.1489
AARD	0	genome.wustl.edu	37	8	117950510	117950511	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	117950510	117950511	AG	-	DEL	AARD	ENST00000378279	human	ensembl	74_37	+1	known	frame_shift_del	c.28_29	p.R12fs	0.001:0.002	NULL	NULL	-	no_errors	AARD	HGNC	ENSG00000205002				29	0	0	65	15	18.75
TATDN1	0	genome.wustl.edu	37	8	125500846	125500847	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	125500846	125500847	-	A	INS	TATDN1	ENST00000276692	human	ensembl	74_37	-1	known	frame_shift_ins	c.883_882	p.P294fs	1.000:1.000	pirsf_TatD_family	pfam_TatD_family,pirsf_TatD_family	-	no_errors	TATDN1	HGNC	ENSG00000147687				39	0	0	39	9	18.75
ENSG00000223697	0	genome.wustl.edu	37	8	133854715	133854715	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	133854715	133854715	T	-	DEL	ENSG00000223697	ENST00000608375	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	AF230666.2	Clone_based_vega_gene	ENSG00000223697				17	0	0	11	17	60.7143
ZC3H3	0	genome.wustl.edu	37	8	144620311	144620311	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	144620311	144620311	G	-	DEL	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	frame_shift_del	c.1226	p.P409fs	0.026	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164				77	0	0	139	11	7.33333
HSF1	0	genome.wustl.edu	37	8	145535876	145535876	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	145535876	145535876	C	-	DEL	HSF1	ENST00000528838	human	ensembl	74_37	+1	known	frame_shift_del	c.1088	p.P365fs	0.002	pfam_Vert_HSTF_C	pfam_Vert_HSTF_C,pfam_HSF_DNA-bd,smart_HSF_DNA-bd,prints_HSF_DNA-bd	-	no_errors	HSF1	HGNC	ENSG00000185122				19	0	0	41	8	16.3265
DGAT1	0	genome.wustl.edu	37	8	145540341	145540341	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	145540341	145540341	A	-	DEL	DGAT1	ENST00000332324	human	ensembl	74_37	-1	known	frame_shift_del	c.1343	p.F448fs	0.999	pfam_MBOAT_fam	pfam_MBOAT_fam,superfamily_PEP-util_enz_mobile_dom	-	no_errors	DGAT1	HGNC	ENSG00000185000				19	0	0	35	9	20.4545
TONSL	0	genome.wustl.edu	37	8	145660453	145660453	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	145660453	145660453	C	-	DEL	TONSL	ENST00000409379	human	ensembl	74_37	-1	known	frame_shift_del	c.2953	p.A985fs	0.996	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TONSL	HGNC	ENSG00000160949				15	0	0	29	7	19.4444
KIFC2	0	genome.wustl.edu	37	8	145692659	145692659	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	145692659	145692659	G	-	DEL	KIFC2	ENST00000301332	human	ensembl	74_37	+1	known	frame_shift_del	c.404	p.R137fs	0.026	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIFC2	HGNC	ENSG00000167702				90	0	0	164	48	22.6415
SLC7A2	0	genome.wustl.edu	37	8	17402081	17402081	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	17402081	17402081	T	-	DEL	SLC7A2	ENST00000004531	human	ensembl	74_37	+1	known	frame_shift_del	c.618	p.F208fs	0.996	pfam_AA-permease/SLC12A_dom,tigrfam_Cat_AA_permease	pfam_AA-permease/SLC12A_dom,tigrfam_Cat_AA_permease	-	no_errors	SLC7A2	HGNC	ENSG00000003989				36	0	0	48	11	18.6441
ADAM28	0	genome.wustl.edu	37	8	24188782	24188783	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	24188782	24188783	-	A	INS	ADAM28	ENST00000265769	human	ensembl	74_37	+1	known	frame_shift_ins	c.1223_1224	p.I409fs	0.920:0.071	pfscan_Blood-coag_inhib_Disintegrin	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM28	HGNC	ENSG00000042980				67	0	0	89	19	17.5926
ADAM7	0	genome.wustl.edu	37	8	24350675	24350675	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	24350675	24350675	T	-	DEL	ADAM7	ENST00000175238	human	ensembl	74_37	+1	known	frame_shift_del	c.1775	p.L594fs	0.006	pfam_ADAM_Cys-rich,smart_ADAM_Cys-rich	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM7	HGNC	ENSG00000069206				41	0	0	54	13	19.403
NRG1	0	genome.wustl.edu	37	8	32607050	32607050	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	32607050	32607050	T	-	DEL	NRG1	ENST00000523681	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NRG1	HGNC	ENSG00000157168				56	0	0	92	18	16.3636
SOX17	0	genome.wustl.edu	37	8	55372288	55372288	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	55372288	55372288	C	-	DEL	SOX17	ENST00000297316	human	ensembl	74_37	+1	known	frame_shift_del	c.978	p.P328fs	0.981	pfam_Sox_C_TAD	pfam_Sox_C_TAD,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX17	HGNC	ENSG00000164736				12	0	0	18	8	30.7692
SULF1	0	genome.wustl.edu	37	8	70488373	70488373	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	70488373	70488373	C	-	DEL	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	frame_shift_del	c.341	p.S116fs	0.999	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573				62	0	0	78	15	16.129
SLCO5A1	0	genome.wustl.edu	37	8	70585215	70585215	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	70585215	70585215	T	-	DEL	SLCO5A1	ENST00000260126	human	ensembl	74_37	-1	known	frame_shift_del	c.2436	p.I814fs	0.779	NULL	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO5A1	HGNC	ENSG00000137571				65	0	0	141	34	19.4286
IMPA1	0	genome.wustl.edu	37	8	82588516	82588516	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	82588516	82588516	T	-	DEL	IMPA1	ENST00000449740	human	ensembl	74_37	-1	known	splice_site_del	c.480-2	e5-2	0.993	-	-	-	no_errors	IMPA1	HGNC	ENSG00000133731				34	0	0	15	2	11.7647
ENSG00000253722	0	genome.wustl.edu	37	8	94745548	94745548	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	94745548	94745548	A	-	DEL	ENSG00000253722	ENST00000517998	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-10N23.4	Clone_based_vega_gene	ENSG00000253722				9	0	0	11	10	47.619
ESRP1	0	genome.wustl.edu	37	8	95686611	95686611	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	95686611	95686611	A	-	DEL	ESRP1	ENST00000433389	human	ensembl	74_37	+1	known	frame_shift_del	c.1528	p.N512fs	1.000	smart_RRM_dom	superfamily_RNaseH-like_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ESRP1	HGNC	ENSG00000104413				55	0	0	81	21	20.5882
SNORA72	0	genome.wustl.edu	37	8	99054837	99054838	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	8	99054837	99054838	AA	-	DEL	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049:0.047	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970				55	0	0	51	27	34.6154
COL15A1	0	genome.wustl.edu	37	9	101816906	101816906	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	101816906	101816906	A	-	DEL	COL15A1	ENST00000375001	human	ensembl	74_37	+1	known	frame_shift_del	c.2999	p.G1002fs	1.000	superfamily_C-type_lectin_fold	pfam_Collagenase_NC10/endostatin,pfam_Collagen,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL15A1	HGNC	ENSG00000204291				29	0	0	14	6	30
RALGDS	0	genome.wustl.edu	37	9	135981349	135981351	+	In_Frame_Del	DEL	GTT	GTT	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	GTT	GTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	135981349	135981351	GTT	-	DEL	RALGDS	ENST00000542690	human	ensembl	74_37	-1	known	in_frame_del	c.1785_1783	p.N595in_frame_del	1.000:1.000:1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RALGDS	HGNC	ENSG00000160271				33	0	0	16	8	33.3333
PPP1R26	0	genome.wustl.edu	37	9	138379043	138379043	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	138379043	138379043	G	-	DEL	PPP1R26	ENST00000356818	human	ensembl	74_37	+1	known	frame_shift_del	c.2687	p.V898fs	0.002	NULL	NULL	-	no_errors	PPP1R26	HGNC	ENSG00000196422				85	0	0	69	51	42.5
DENND4C	0	genome.wustl.edu	37	9	19324482	19324482	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	19324482	19324482	T	-	DEL	DENND4C	ENST00000602925	human	ensembl	74_37	+1	known	frame_shift_del	c.1930	p.F645fs	1.000	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4C	HGNC	ENSG00000137145				99	0	0	78	28	26.4151
C9orf131	0	genome.wustl.edu	37	9	35043650	35043650	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	35043650	35043650	C	-	DEL	C9orf131	ENST00000312292	human	ensembl	74_37	+1	known	frame_shift_del	c.1024	p.C344fs	0.000	NULL	NULL	-	no_errors	C9orf131	HGNC	ENSG00000174038				268	0	0	247	92	27.1386
TESK1	0	genome.wustl.edu	37	9	35608960	35608960	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	9	35608960	35608960	C	-	DEL	TESK1	ENST00000336395	human	ensembl	74_37	+1	known	frame_shift_del	c.1102	p.N370fs	0.728	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK1	HGNC	ENSG00000107140				118	0	0	82	43	34.4
RNF128	0	genome.wustl.edu	37	X	106016247	106016247	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	106016247	106016247	A	-	DEL	RNF128	ENST00000255499	human	ensembl	74_37	+1	known	frame_shift_del	c.589	p.K198fs	1.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF128	HGNC	ENSG00000133135				133	0	0	60	40	40
UPF3B	0	genome.wustl.edu	37	X	118977168	118977168	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	118977168	118977168	T	-	DEL	UPF3B	ENST00000276201	human	ensembl	74_37	-1	known	frame_shift_del	c.566	p.N189fs	1.000	pfam_Nonsense_mediated_decay_UPF3	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3B	HGNC	ENSG00000125351				90	0	0	46	25	35.2113
RBMX2	0	genome.wustl.edu	37	X	129536209	129536209	+	RNA	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	129536209	129536209	C	-	DEL	RBMX2	ENST00000469953	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RBMX2	HGNC	ENSG00000134597				15	0	0	13	11	45.8333
RBMX	0	genome.wustl.edu	37	X	135961586	135961587	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	135961586	135961587	TG	-	DEL	RBMX	ENST00000320676	human	ensembl	74_37	-1	known	frame_shift_del	c.1	p.M1fs	1.000	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMX	HGNC	ENSG00000147274				96	0	0	77	14	15.3846
MAGEC1	0	genome.wustl.edu	37	X	140993808	140993810	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	140993808	140993810	CTC	-	DEL	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	in_frame_del	c.618_620	p.S208in_frame_del	0.990:0.989:0.985	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495				378	0	0	195	38	16.309
DMD	0	genome.wustl.edu	37	X	33229458	33229458	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	33229458	33229458	A	-	DEL	DMD	ENST00000463609	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	DMD	HGNC	ENSG00000198947				22	0	0	12	9	42.8571
WDR13	0	genome.wustl.edu	37	X	48457035	48457036	+	RNA	DEL	CC	CC	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	48457035	48457036	CC	-	DEL	WDR13	ENST00000479279	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	WDR13	HGNC	ENSG00000101940				14	0	0	13	7	35
IQSEC2	0	genome.wustl.edu	37	X	53285127	53285127	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	53285127	53285127	G	-	DEL	IQSEC2	ENST00000396435	human	ensembl	74_37	-1	known	frame_shift_del	c.854	p.P285fs	0.989	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_P-loop_NTPase,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC2	HGNC	ENSG00000124313				20	0	0	9	4	30.7692
UBQLN2	0	genome.wustl.edu	37	X	56591874	56591874	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	56591874	56591874	C	-	DEL	UBQLN2	ENST00000338222	human	ensembl	74_37	+1	known	frame_shift_del	c.1568	p.P525fs	0.175	NULL	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN2	HGNC	ENSG00000188021				10	0	0	13	6	31.5789
ARHGEF9	0	genome.wustl.edu	37	X	62974289	62974289	+	RNA	DEL	T	T	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	62974289	62974289	T	-	DEL	ARHGEF9	ENST00000495564	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ARHGEF9	HGNC	ENSG00000131089				27	0	0	16	4	20
NLGN3	0	genome.wustl.edu	37	X	70390033	70390034	+	RNA	DEL	AC	AC	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	70390033	70390034	AC	-	DEL	NLGN3	ENST00000476589	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.115:0.187	-	-	-	no_errors	NLGN3	HGNC	ENSG00000196338				15	0	0	22	5	18.5185
XIST	0	genome.wustl.edu	37	X	73071941	73071942	+	RNA	DEL	AA	AA	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	73071941	73071942	AA	-	DEL	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.531:0.460	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				14	0	0	9	3	25
ABCB7	0	genome.wustl.edu	37	X	74295434	74295434	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	74295434	74295434	A	-	DEL	ABCB7	ENST00000253577	human	ensembl	74_37	-1	known	frame_shift_del	c.621	p.F207fs	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB7	HGNC	ENSG00000131269				41	0	0	13	13	50
HMGN5	0	genome.wustl.edu	37	X	80377176	80377176	+	RNA	DEL	A	A	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	80377176	80377176	A	-	DEL	HMGN5	ENST00000491275	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HMGN5	HGNC	ENSG00000198157				11	0	0	5	4	44.4444
PCDH19	0	genome.wustl.edu	37	X	99662505	99662505	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4G9-01A-11D-A24D-08	TCGA-HU-A4G9-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	58d0e07c-dede-4e0a-a7a1-99ed83e47b56	a87e18a7-d785-4228-9b3c-97fa7acb6635	X	99662505	99662505	G	-	DEL	PCDH19	ENST00000373034	human	ensembl	74_37	-1	known	frame_shift_del	c.1091	p.P364fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH19	HGNC	ENSG00000165194				67	0	0	65	45	40.9091
