Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
PRAMEF11	0	genome.wustl.edu	37	1	12884983	12884983	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	12884983	12884983	C	T	SNP	PRAMEF11	ENST00000535591	human	ensembl	74_37	-1	known	silent	c.1128	p.P376	0.003	NULL	NULL	-	no_errors	PRAMEF11	HGNC	ENSG00000204513				160	0	0	99	39	28.2609
PRAMEF2	0	genome.wustl.edu	37	1	12920055	12920055	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	12920055	12920055	G	T	SNP	PRAMEF2	ENST00000240189	human	ensembl	74_37	+1	known	missense	c.795	p.R265S	0.017	NULL	NULL	-	no_errors	PRAMEF2	HGNC	ENSG00000120952				118	0	0	80	13	13.9785
LOC100996735	0	genome.wustl.edu	37	1	148933289	148933289	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	148933289	148933289	A	G	SNP	LOC100996735	ENST00000294715	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.194	-	-	-	no_errors	RP11-14N7.2	Clone_based_vega_gene	ENSG00000232527				12	0	0	9	4	30.7692
HRNR	0	genome.wustl.edu	37	1	152192118	152192118	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	152192118	152192118	C	T	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.1987	p.G663S	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915				441	0	0	362	41	10.1737
SPRR1A	0	genome.wustl.edu	37	1	152957856	152957856	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	152957856	152957856	C	G	SNP	SPRR1A	ENST00000307122	human	ensembl	74_37	+1	known	missense	c.150	p.H50Q	0.135	pfam_Cornifin	pfam_Cornifin	-	no_errors	SPRR1A	HGNC	ENSG00000169474				293	2	0.677966	208	27	11.4894
CD1A	0	genome.wustl.edu	37	1	158227221	158227221	+	Silent	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	158227221	158227221	T	C	SNP	CD1A	ENST00000289429	human	ensembl	74_37	+1	known	silent	c.894	p.S298	0.000	NULL	pfam_Ig_C1-set,pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1A	HGNC	ENSG00000158477				179	0	0	151	20	11.6959
SPTA1	0	genome.wustl.edu	37	1	158585162	158585162	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	158585162	158585162	C	T	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.6632	p.R2211H	0.978	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				156	0	0	89	38	29.9213
NBPF1	0	genome.wustl.edu	37	1	16939857	16939857	+	RNA	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	16939857	16939857	C	T	SNP	NBPF1	ENST00000449853	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.597	-	-	-	no_errors	NBPF1	HGNC	ENSG00000219481				8	0	0	8	3	27.2727
TTC13	0	genome.wustl.edu	37	1	231044732	231044732	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	231044732	231044732	T	C	SNP	TTC13	ENST00000366661	human	ensembl	74_37	-1	known	missense	c.2344	p.M782V	1.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC13	HGNC	ENSG00000143643				128	0	0	118	7	5.6
GALE	0	genome.wustl.edu	37	1	24124220	24124220	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	24124220	24124220	C	T	SNP	GALE	ENST00000374497	human	ensembl	74_37	-1	known	missense	c.493	p.E165K	1.000	pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase,pfam_dTDP_dehydrorham_reduct,pfam_Male_sterile_NAD-bd,tigrfam_GalE	pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase,pfam_dTDP_dehydrorham_reduct,pfam_Polysac_CapD-like,pfam_DH_sc/Rdtase_SDR,pfam_Male_sterile_NAD-bd,pfam_PKS_KR,prints_Nuc_sugar_epim,tigrfam_GalE	-	no_errors	GALE	HGNC	ENSG00000117308				92	0	0	52	14	21.2121
ZFP69B	0	genome.wustl.edu	37	1	40929058	40929058	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	40929058	40929058	G	C	SNP	ZFP69B	ENST00000411995	human	ensembl	74_37	+1	known	missense	c.1402	p.V468L	0.993	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_Tscrpt_reg_SCAN,superfamily_Krueppel-associated_box,superfamily_Retrov_capsid_C,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZFP69B	HGNC	ENSG00000187801				73	0	0	44	6	12
IPO13	0	genome.wustl.edu	37	1	44424237	44424237	+	Silent	SNP	C	C	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	44424237	44424237	C	A	SNP	IPO13	ENST00000372343	human	ensembl	74_37	+1	known	silent	c.1854	p.I618	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO13	HGNC	ENSG00000117408				93	0	0	50	14	21.875
RPE65	0	genome.wustl.edu	37	1	68906582	68906582	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	68906582	68906582	A	T	SNP	RPE65	ENST00000262340	human	ensembl	74_37	-1	known	missense	c.597	p.N199K	0.997	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	RPE65	HGNC	ENSG00000116745				48	0	0	30	5	14.2857
PDCD11	0	genome.wustl.edu	37	10	105158256	105158256	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	10	105158256	105158256	C	T	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	nonsense	c.73	p.Q25*	0.110	NULL	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843				84	0	0	46	7	13.2075
PLEKHS1	0	genome.wustl.edu	37	10	115526470	115526470	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	10	115526470	115526470	A	G	SNP	PLEKHS1	ENST00000369310	human	ensembl	74_37	+1	known	missense	c.199	p.I67V	0.993	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHS1	HGNC	ENSG00000148735				52	0	0	28	6	17.6471
NEBL	0	genome.wustl.edu	37	10	21117564	21117564	+	Splice_Site	SNP	C	C	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	10	21117564	21117564	C	G	SNP	NEBL	ENST00000377122	human	ensembl	74_37	-1	known	splice_site	c.1672-1	e17-1	1.000	-	-	-	no_errors	NEBL	HGNC	ENSG00000078114				19	0	0	15	3	16.6667
ARMC3	0	genome.wustl.edu	37	10	23295908	23295908	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	10	23295908	23295908	C	T	SNP	ARMC3	ENST00000298032	human	ensembl	74_37	+1	known	silent	c.1827	p.Y609	0.000	NULL	pfam_Armadillo,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC3	HGNC	ENSG00000165309				80	0	0	61	10	14.0845
ZNF33A	0	genome.wustl.edu	37	10	38344966	38344966	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	10	38344966	38344966	A	C	SNP	ZNF33A	ENST00000432900	human	ensembl	74_37	+1	known	missense	c.1932	p.K644N	0.063	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33A	HGNC	ENSG00000189180				78	0	0	54	4	6.89655
PGBD3	0	genome.wustl.edu	37	10	50724334	50724334	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	10	50724334	50724334	T	C	SNP	PGBD3	ENST00000603152	human	ensembl	74_37	-1	known	missense	c.2231	p.Y744C	0.044	NULL	NULL	-	no_errors	PGBD3	HGNC	ENSG00000243251				68	0	0	43	8	15.6863
PCDH15	0	genome.wustl.edu	37	10	56077046	56077046	+	Silent	SNP	A	A	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	10	56077046	56077046	A	T	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	silent	c.861	p.P287	0.991	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				94	0	0	51	10	16.3934
SAR1A	0	genome.wustl.edu	37	10	71913593	71913593	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	10	71913593	71913593	C	T	SNP	SAR1A	ENST00000373238	human	ensembl	74_37	-1	known	splice_site	c.480+1	e5+1	1.000	-	-	-	no_errors	SAR1A	HGNC	ENSG00000079332				158	0	0	122	27	18.1208
MMRN2	0	genome.wustl.edu	37	10	88702628	88702628	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	10	88702628	88702628	C	T	SNP	MMRN2	ENST00000372027	human	ensembl	74_37	-1	known	missense	c.1913	p.R638H	0.000	NULL	pfam_C1q,pfam_EMI_domain,superfamily_Tumour_necrosis_fac-like_dom,superfamily_tRNA-bd_arm,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	MMRN2	HGNC	ENSG00000173269				22	0	0	10	3	23.0769
MUC2	0	genome.wustl.edu	37	11	1092910	1092910	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	1092910	1092910	G	A	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.4729	p.G1577S	0.048	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				37	0	0	35	3	7.89474
ARHGAP20	0	genome.wustl.edu	37	11	110451527	110451527	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	110451527	110451527	G	T	SNP	ARHGAP20	ENST00000260283	human	ensembl	74_37	-1	known	missense	c.2143	p.L715I	0.315	NULL	pfam_RhoGAP_dom,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Ras-assoc,pfscan_RhoGAP_dom	-	no_errors	ARHGAP20	HGNC	ENSG00000137727				94	0	0	73	11	13.0952
DSCAML1	0	genome.wustl.edu	37	11	117310000	117310000	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	117310000	117310000	C	T	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.4306	p.V1436I	0.998	pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				103	0	0	65	4	5.7971
MUC5B	0	genome.wustl.edu	37	11	1272159	1272159	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	1272159	1272159	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.14058	p.T4686	0.001	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				45	0	0	24	4	14.2857
LOC440040	0	genome.wustl.edu	37	11	49831413	49831413	+	RNA	SNP	A	A	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	49831413	49831413	A	C	SNP	LOC440040	ENST00000527477	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-707M1.1	Clone_based_vega_gene	ENSG00000205035				65	0	0	29	4	12.1212
MS4A14	0	genome.wustl.edu	37	11	60170398	60170398	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	60170398	60170398	C	T	SNP	MS4A14	ENST00000300187	human	ensembl	74_37	+1	known	missense	c.332	p.T111M	0.000	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A14	HGNC	ENSG00000166928				146	0	0	101	19	15.8333
MS4A10	0	genome.wustl.edu	37	11	60558491	60558491	+	Silent	SNP	C	C	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	60558491	60558491	C	A	SNP	MS4A10	ENST00000308287	human	ensembl	74_37	+1	known	silent	c.228	p.G76	0.002	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A10	HGNC	ENSG00000172689				182	0	0	131	24	15.4839
CCDC86	0	genome.wustl.edu	37	11	60609973	60609973	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	60609973	60609973	A	C	SNP	CCDC86	ENST00000227520	human	ensembl	74_37	+1	known	missense	c.376	p.K126Q	0.000	NULL	NULL	-	no_errors	CCDC86	HGNC	ENSG00000110104				172	0	0	122	21	14.6853
DDB1	0	genome.wustl.edu	37	11	61094279	61094279	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	61094279	61094279	G	A	SNP	DDB1	ENST00000301764	human	ensembl	74_37	-1	known	silent	c.636	p.V212	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	DDB1	HGNC	ENSG00000167986				240	0	0	198	33	14.2857
DAGLA	0	genome.wustl.edu	37	11	61508640	61508640	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	61508640	61508640	G	A	SNP	DAGLA	ENST00000257215	human	ensembl	74_37	+1	known	missense	c.1990	p.E664K	1.000	NULL	pfam_Lipase_3	-	no_errors	DAGLA	HGNC	ENSG00000134780				130	0	0	65	29	30.8511
CTSW	0	genome.wustl.edu	37	11	65650595	65650595	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	65650595	65650595	G	T	SNP	CTSW	ENST00000307886	human	ensembl	74_37	+1	known	missense	c.801	p.K267N	0.001	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSW	HGNC	ENSG00000172543				259	1	0.384615	205	32	13.5021
CABP2	0	genome.wustl.edu	37	11	67287394	67287394	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	67287394	67287394	G	A	SNP	CABP2	ENST00000294288	human	ensembl	74_37	-1	known	silent	c.507	p.D169	1.000	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP2	HGNC	ENSG00000167791				61	0	0	32	11	25.5814
PDE2A	0	genome.wustl.edu	37	11	72289976	72289976	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	72289976	72289976	G	T	SNP	PDE2A	ENST00000334456	human	ensembl	74_37	-1	known	missense	c.2434	p.Q812K	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE2A	HGNC	ENSG00000186642				47	0	0	33	24	42.1053
ARAP1	0	genome.wustl.edu	37	11	72398783	72398783	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	72398783	72398783	G	A	SNP	ARAP1	ENST00000393609	human	ensembl	74_37	-1	known	silent	c.4071	p.C1357	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_Ras-assoc,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP1	HGNC	ENSG00000186635				225	0	0	143	73	33.7963
WDR66	0	genome.wustl.edu	37	12	122404867	122404867	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	12	122404867	122404867	G	A	SNP	WDR66	ENST00000288912	human	ensembl	74_37	+1	known	silent	c.2499	p.T833	0.717	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR66	HGNC	ENSG00000158023				135	0	0	85	22	20.5607
CACNA1C	0	genome.wustl.edu	37	12	2675732	2675732	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	12	2675732	2675732	G	T	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	missense	c.1653	p.W551C	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067				19	0	0	10	3	23.0769
DDX11	0	genome.wustl.edu	37	12	31237922	31237922	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	12	31237922	31237922	G	C	SNP	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	missense	c.500	p.R167T	0.018	superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573				20	0	0	18	5	21.7391
NELL2	0	genome.wustl.edu	37	12	45173632	45173632	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	12	45173632	45173632	T	C	SNP	NELL2	ENST00000437801	human	ensembl	74_37	-1	known	missense	c.659	p.K220R	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL2	HGNC	ENSG00000184613				85	0	0	49	8	14.0351
PRPF40B	0	genome.wustl.edu	37	12	50028897	50028897	+	Silent	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	12	50028897	50028897	G	T	SNP	PRPF40B	ENST00000548825	human	ensembl	74_37	+1	known	silent	c.1017	p.L339	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	PRPF40B	HGNC	ENSG00000110844				55	0	0	28	2	6.66667
KRT75	0	genome.wustl.edu	37	12	52824425	52824425	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	12	52824425	52824425	C	T	SNP	KRT75	ENST00000252245	human	ensembl	74_37	-1	known	missense	c.935	p.R312H	1.000	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT75	HGNC	ENSG00000170454				195	0	0	142	32	18.3908
RARG	0	genome.wustl.edu	37	12	53621231	53621231	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	12	53621231	53621231	G	A	SNP	RARG	ENST00000394426	human	ensembl	74_37	-1	known	silent	c.99	p.L33	1.000	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARG	HGNC	ENSG00000172819				52	0	0	33	20	37.7358
CHD4	0	genome.wustl.edu	37	12	6690868	6690868	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	12	6690868	6690868	G	A	SNP	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	missense	c.4712	p.P1571L	1.000	NULL	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642				124	0	0	118	12	9.23077
CLYBL	0	genome.wustl.edu	37	13	100425205	100425205	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	13	100425205	100425205	T	A	SNP	CLYBL	ENST00000339105	human	ensembl	74_37	+1	known	missense	c.190	p.S64T	0.003	pfam_Aldehyde-lyase_domain,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,pirsf_Citrate_lyase_beta	pfam_Aldehyde-lyase_domain,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,pirsf_Citrate_lyase_beta	-	no_errors	CLYBL	HGNC	ENSG00000125246				94	0	0	59	11	15.7143
SACS	0	genome.wustl.edu	37	13	23905122	23905122	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	13	23905122	23905122	A	C	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.12893	p.L4298R	0.970	superfamily_DnaJ_domain	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				104	0	0	89	18	16.8224
MTUS2	0	genome.wustl.edu	37	13	29598939	29598939	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	13	29598939	29598939	C	T	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.134	p.T45M	0.014	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938				78	0	0	40	7	14.8936
NBEA	0	genome.wustl.edu	37	13	36241642	36241642	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	13	36241642	36241642	C	T	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	nonsense	c.8533	p.R2845*	0.978	superfamily_WD40_repeat_dom	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				201	0	0	126	19	13.1034
FREM2	0	genome.wustl.edu	37	13	39425246	39425246	+	Splice_Site	SNP	G	G	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	13	39425246	39425246	G	C	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	splice_site	c.6742+1	e10+1	1.000	-	-	-	no_errors	FREM2	HGNC	ENSG00000150893				52	0	0	43	5	10.4167
DYNC1H1	0	genome.wustl.edu	37	14	102467528	102467528	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	14	102467528	102467528	G	A	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	missense	c.4232	p.R1411H	1.000	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102				359	0	0	172	147	46.0815
METTL17	0	genome.wustl.edu	37	14	21464860	21464860	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	14	21464860	21464860	C	T	SNP	METTL17	ENST00000382985	human	ensembl	74_37	+1	known	missense	c.1255	p.R419W	0.431	pfam_Ribosomal_Rsm22_bac-type	pfam_Ribosomal_Rsm22_bac-type,pfam_Methyltransf_11	-	no_errors	METTL17	HGNC	ENSG00000165792				123	1	0.806452	87	49	36.0294
PAX9	0	genome.wustl.edu	37	14	37132490	37132490	+	Silent	SNP	C	C	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	14	37132490	37132490	C	A	SNP	PAX9	ENST00000361487	human	ensembl	74_37	+1	known	silent	c.393	p.I131	1.000	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX9	HGNC	ENSG00000198807				154	0	0	560	70	11.1111
MIPOL1	0	genome.wustl.edu	37	14	37969170	37969170	+	Silent	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	14	37969170	37969170	T	C	SNP	MIPOL1	ENST00000327441	human	ensembl	74_37	+1	known	silent	c.1089	p.L363	0.695	NULL	NULL	-	no_errors	MIPOL1	HGNC	ENSG00000151338				86	0	0	273	46	14.4201
SAMD15	0	genome.wustl.edu	37	14	77845388	77845388	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	14	77845388	77845388	C	T	SNP	SAMD15	ENST00000216471	human	ensembl	74_37	+1	known	missense	c.1627	p.L543F	0.481	superfamily_SAM/pointed,smart_SAM	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD15	HGNC	ENSG00000100583				73	0	0	52	12	18.75
RYR3	0	genome.wustl.edu	37	15	33895329	33895329	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	15	33895329	33895329	G	A	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.1928	p.R643Q	1.000	pfscan_B30.2/SPRY	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				127	0	0	76	13	14.6067
PAK6	0	genome.wustl.edu	37	15	40568171	40568171	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	15	40568171	40568171	G	A	SNP	PAK6	ENST00000260404	human	ensembl	74_37	+1	known	missense	c.1922	p.R641Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom	-	no_errors	PAK6	HGNC	ENSG00000137843				178	1	0.558659	138	22	13.75
MYO5A	0	genome.wustl.edu	37	15	52622646	52622646	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	15	52622646	52622646	G	A	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	nonsense	c.4459	p.R1487*	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535				140	0	0	85	14	14.1414
HERC1	0	genome.wustl.edu	37	15	64017608	64017608	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	15	64017608	64017608	G	A	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	missense	c.3451	p.R1151W	0.998	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657				131	0	0	121	16	11.6788
SKOR1	0	genome.wustl.edu	37	15	68118661	68118661	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	15	68118661	68118661	G	A	SNP	SKOR1	ENST00000380035	human	ensembl	74_37	+1	known	silent	c.495	p.S165	0.768	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	pfam_Transform_Ski,pfam_c-SKI_SMAD4-bd_dom,superfamily_DNA-bd_dom_put,superfamily_SAND_dom-like	-	no_errors	SKOR1	HGNC	ENSG00000188779				141	0	0	96	17	15.0442
CYP1A1	0	genome.wustl.edu	37	15	75013993	75013993	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	15	75013993	75013993	G	A	SNP	CYP1A1	ENST00000379727	human	ensembl	74_37	-1	known	silent	c.891	p.N297	0.963	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP1,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP1A1	HGNC	ENSG00000140465				97	0	0	73	12	14.1176
LOC645752	0	genome.wustl.edu	37	15	78211202	78211202	+	RNA	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	15	78211202	78211202	C	T	SNP	LOC645752	ENST00000567226	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	RP11-114H24.2	Clone_based_vega_gene	ENSG00000260776				225	0	0	175	65	27.0833
ADAMTSL3	0	genome.wustl.edu	37	15	84694085	84694085	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	15	84694085	84694085	C	T	SNP	ADAMTSL3	ENST00000286744	human	ensembl	74_37	+1	known	missense	c.4553	p.T1518I	0.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218				70	0	0	60	9	13.0435
CACNA1H	0	genome.wustl.edu	37	16	1250551	1250551	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	1250551	1250551	G	A	SNP	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	missense	c.1099	p.A367T	0.999	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557				86	0	0	60	4	6.25
KIAA0430	0	genome.wustl.edu	37	16	15715617	15715617	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	15715617	15715617	G	T	SNP	KIAA0430	ENST00000396368	human	ensembl	74_37	-1	known	missense	c.2612	p.A871D	1.000	NULL	pfam_Limkain_b1_cons_dom,pfam_NYN_limkain-b1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	KIAA0430	HGNC	ENSG00000166783				65	0	0	49	7	12.5
NOMO3	0	genome.wustl.edu	37	16	16367902	16367902	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	16367902	16367902	C	T	SNP	NOMO3	ENST00000399336	human	ensembl	74_37	+1	known	missense	c.2326	p.P776S	0.999	NULL	pfam_DUF2012,superfamily_CarboxyPept-like_regulatory,superfamily_Carb-bd-like_fold,superfamily_Collagen-bd_Cna_B-typ_dom	-	no_errors	NOMO3	HGNC	ENSG00000103226				122	0	0	72	9	11.1111
CACNG3	0	genome.wustl.edu	37	16	24372728	24372728	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	24372728	24372728	C	T	SNP	CACNG3	ENST00000005284	human	ensembl	74_37	+1	known	silent	c.492	p.P164	0.141	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	-	no_errors	CACNG3	HGNC	ENSG00000006116				176	0	0	125	14	10.0719
AQP8	0	genome.wustl.edu	37	16	25232887	25232887	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	25232887	25232887	G	A	SNP	AQP8	ENST00000219660	human	ensembl	74_37	+1	known	missense	c.370	p.G124R	1.000	pfam_MIP,superfamily_Aquaporin-like,prints_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_Aquaporin_8,prints_MIP	-	no_errors	AQP8	HGNC	ENSG00000103375				143	0	0	82	13	13.6842
PHKB	0	genome.wustl.edu	37	16	47533780	47533780	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	47533780	47533780	G	T	SNP	PHKB	ENST00000299167	human	ensembl	74_37	+1	known	missense	c.280	p.A94S	0.752	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKB	HGNC	ENSG00000102893				120	0	0	109	11	9.16667
ZNF423	0	genome.wustl.edu	37	16	49669760	49669760	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	49669760	49669760	G	A	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	silent	c.3303	p.N1101	0.192	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935				48	0	0	47	9	16.0714
USB1	0	genome.wustl.edu	37	16	58036513	58036513	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	58036513	58036513	G	A	SNP	USB1	ENST00000219281	human	ensembl	74_37	+1	known	missense	c.229	p.E77K	1.000	pfam_Usb1	pfam_Usb1	-	no_errors	USB1	HGNC	ENSG00000103005				123	1	0.806452	89	18	16.8224
DHODH	0	genome.wustl.edu	37	16	72048403	72048403	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	72048403	72048403	A	G	SNP	DHODH	ENST00000219240	human	ensembl	74_37	+1	known	missense	c.266	p.N89S	1.000	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	-	no_errors	DHODH	HGNC	ENSG00000102967				66	0	0	47	14	22.9508
SDR42E1	0	genome.wustl.edu	37	16	82033056	82033056	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	82033056	82033056	C	T	SNP	SDR42E1	ENST00000328945	human	ensembl	74_37	-1	known	missense	c.842	p.R281H	1.000	pfam_3Beta_OHSteriod_DH/Estase	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct,pfam_Male_sterile_NAD-bd,pfam_Polysac_CapD-like	-	no_errors	SDR42E1	HGNC	ENSG00000184860				130	0	0	109	9	7.62712
HSD17B2	0	genome.wustl.edu	37	16	82069222	82069222	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	82069222	82069222	T	G	SNP	HSD17B2	ENST00000199936	human	ensembl	74_37	+1	known	missense	c.193	p.C65G	0.133	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B2	HGNC	ENSG00000086696				82	0	0	59	7	10.6061
IRF8	0	genome.wustl.edu	37	16	85952271	85952271	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	85952271	85952271	C	T	SNP	IRF8	ENST00000268638	human	ensembl	74_37	+1	known	missense	c.850	p.R284W	1.000	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF8	HGNC	ENSG00000140968				60	0	0	50	16	24.2424
DPEP1	0	genome.wustl.edu	37	16	89696881	89696881	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	16	89696881	89696881	C	T	SNP	DPEP1	ENST00000261615	human	ensembl	74_37	+1	known	silent	c.63	p.D21	0.000	NULL	pfam_Peptidase_M19	-	no_errors	DPEP1	HGNC	ENSG00000015413				137	0	0	92	10	9.80392
DDX42	0	genome.wustl.edu	37	17	61886998	61886998	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	17	61886998	61886998	C	T	SNP	DDX42	ENST00000389924	human	ensembl	74_37	+1	known	nonsense	c.1231	p.R411*	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX42	HGNC	ENSG00000198231				76	0	0	72	9	11.1111
KCNJ2	0	genome.wustl.edu	37	17	68171214	68171214	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	17	68171214	68171214	G	A	SNP	KCNJ2	ENST00000243457	human	ensembl	74_37	+1	known	missense	c.34	p.V12I	1.000	pfam_K_chnl_inward-rec_Kir_N	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.1	-	no_errors	KCNJ2	HGNC	ENSG00000123700				81	0	0	49	9	15.5172
SSTR2	0	genome.wustl.edu	37	17	71166296	71166296	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	17	71166296	71166296	G	A	SNP	SSTR2	ENST00000357585	human	ensembl	74_37	+1	known	missense	c.838	p.V280I	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_2,prints_Somatstn_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt_5	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_2,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Neuropept_B/W_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt,prints_Somatstn_rcpt_5	-	no_errors	SSTR2	HGNC	ENSG00000180616				145	0	0	108	12	10
CXXC1	0	genome.wustl.edu	37	18	47810386	47810386	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	18	47810386	47810386	C	T	SNP	CXXC1	ENST00000412036	human	ensembl	74_37	-1	known	missense	c.1303	p.E435K	1.000	pfam_CpG-bd_C	pfam_CpG-bd_C,pfam_Znf_CXXC,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	CXXC1	HGNC	ENSG00000154832				161	0	0	88	19	17.757
DNM2	0	genome.wustl.edu	37	19	10934546	10934546	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	19	10934546	10934546	C	T	SNP	DNM2	ENST00000314646	human	ensembl	74_37	+1	known	nonsense	c.1864	p.R622*	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM2	HGNC	ENSG00000079805				92	0	0	58	8	12.1212
TCF3	0	genome.wustl.edu	37	19	1615407	1615407	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	19	1615407	1615407	C	T	SNP	TCF3	ENST00000262965	human	ensembl	74_37	-1	known	missense	c.1699	p.E567K	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TCF3	HGNC	ENSG00000071564				181	0	0	95	26	21.4876
ZNF99	0	genome.wustl.edu	37	19	22941480	22941480	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	19	22941480	22941480	T	G	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	missense	c.958	p.K320Q	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973				55	0	0	40	11	21.5686
CEACAM19	0	genome.wustl.edu	37	19	45185867	45185867	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	19	45185867	45185867	C	T	SNP	CEACAM19	ENST00000403660	human	ensembl	74_37	+1	known	missense	c.821	p.A274V	0.083	NULL	pfam_Ig_V-set	-	no_errors	CEACAM19	HGNC	ENSG00000186567				23	0	0	13	3	18.75
SIGLEC5	0	genome.wustl.edu	37	19	52129341	52129341	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	19	52129341	52129341	C	A	SNP	SIGLEC5	ENST00000222107	human	ensembl	74_37	-1	known	missense	c.1408	p.A470S	0.000	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC5	HGNC	ENSG00000105501				59	0	0	39	6	13.3333
ZNF578	0	genome.wustl.edu	37	19	53014774	53014774	+	Silent	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	19	53014774	53014774	T	C	SNP	ZNF578	ENST00000421239	human	ensembl	74_37	+1	known	silent	c.1140	p.F380	0.003	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF578	HGNC	ENSG00000258405				122	0	0	80	16	16.6667
ZNF845	0	genome.wustl.edu	37	19	53855747	53855747	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	19	53855747	53855747	T	C	SNP	ZNF845	ENST00000458035	human	ensembl	74_37	+1	known	missense	c.1819	p.Y607H	0.010	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF845	HGNC	ENSG00000213799				30	0	0	14	6	30
NLRP2	0	genome.wustl.edu	37	19	55494431	55494431	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	19	55494431	55494431	G	A	SNP	NLRP2	ENST00000448584	human	ensembl	74_37	+1	known	silent	c.1365	p.A455	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP2	HGNC	ENSG00000022556				98	0	0	45	20	30.7692
MUC16	0	genome.wustl.edu	37	19	9072872	9072872	+	Silent	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	19	9072872	9072872	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.14574	p.T4858	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				116	0	0	82	12	12.766
CNTNAP5	0	genome.wustl.edu	37	2	125521689	125521689	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	125521689	125521689	T	G	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.2495	p.L832R	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052				84	0	0	60	11	15.493
LRP1B	0	genome.wustl.edu	37	2	141598508	141598508	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	141598508	141598508	A	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.5093	p.L1698R	1.000	smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				58	0	0	48	8	14.2857
RIF1	0	genome.wustl.edu	37	2	152300221	152300221	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	152300221	152300221	C	T	SNP	RIF1	ENST00000243326	human	ensembl	74_37	+1	known	nonsense	c.1984	p.Q662*	1.000	NULL	pfam_Rif1_N,superfamily_ARM-type_fold	-	no_errors	RIF1	HGNC	ENSG00000080345				55	0	0	60	10	14.2857
DYNC1I2	0	genome.wustl.edu	37	2	172585298	172585298	+	Silent	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	172585298	172585298	T	C	SNP	DYNC1I2	ENST00000397119	human	ensembl	74_37	+1	known	silent	c.1329	p.D443	0.997	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_Dynein_IC_1/2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DYNC1I2	HGNC	ENSG00000077380				20	0	0	11	3	21.4286
TTN	0	genome.wustl.edu	37	2	179416514	179416514	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	179416514	179416514	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	nonsense	c.83409	p.W27803*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				150	0	0	107	26	19.5489
TTN	0	genome.wustl.edu	37	2	179444697	179444697	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	179444697	179444697	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.59613	p.P19871	0.020	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				92	0	0	78	10	11.3636
TTN	0	genome.wustl.edu	37	2	179581872	179581872	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	179581872	179581872	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.21857	p.A7286V	0.994	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				46	0	0	38	4	9.52381
ANKRD44	0	genome.wustl.edu	37	2	197990134	197990134	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	197990134	197990134	C	T	SNP	ANKRD44	ENST00000328737	human	ensembl	74_37	-1	known	missense	c.446	p.R149Q	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD44	HGNC	ENSG00000065413				74	0	0	58	5	7.93651
ABCA12	0	genome.wustl.edu	37	2	215843537	215843537	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	215843537	215843537	G	A	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	silent	c.4968	p.T1656	0.348	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452				101	0	0	72	13	15.2941
ESPNL	0	genome.wustl.edu	37	2	239038920	239038920	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	239038920	239038920	G	A	SNP	ESPNL	ENST00000343063	human	ensembl	74_37	+1	known	missense	c.1565	p.R522H	0.994	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ESPNL	HGNC	ENSG00000144488				25	0	0	22	7	24.1379
NRXN1	0	genome.wustl.edu	37	2	51254932	51254932	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	51254932	51254932	C	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	silent	c.480	p.P160	0.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				54	0	0	15	13	46.4286
PCYOX1	0	genome.wustl.edu	37	2	70486655	70486655	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	70486655	70486655	C	T	SNP	PCYOX1	ENST00000433351	human	ensembl	74_37	+1	known	silent	c.276	p.I92	0.991	pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Amino_oxidase,pirsf_Prenylcysteine_Oxase	pfam_Prenylcys_lyase,pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Amino_oxidase,pirsf_Prenylcysteine_Oxase	-	no_errors	PCYOX1	HGNC	ENSG00000116005				344	0	0	240	42	14.8936
CCT7	0	genome.wustl.edu	37	2	73475031	73475031	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	73475031	73475031	G	A	SNP	CCT7	ENST00000258091	human	ensembl	74_37	+1	known	missense	c.760	p.E254K	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,tigrfam_Chap_CCT_eta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_eta	-	no_errors	CCT7	HGNC	ENSG00000135624				69	0	0	28	7	20
SEMA4F	0	genome.wustl.edu	37	2	74883792	74883792	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	74883792	74883792	T	C	SNP	SEMA4F	ENST00000357877	human	ensembl	74_37	+1	known	missense	c.277	p.S93P	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4F	HGNC	ENSG00000135622				109	0	0	86	16	15.6863
REG1P	0	genome.wustl.edu	37	2	79364432	79364432	+	RNA	SNP	A	A	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	79364432	79364432	A	C	SNP	REG1P	ENST00000377435	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	REG1P	HGNC	ENSG00000204787				43	0	0	25	4	13.7931
LOC654342	0	genome.wustl.edu	37	2	91845772	91845772	+	RNA	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	91845772	91845772	G	A	SNP	LOC654342	ENST00000544283	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.099	-	-	-	no_errors	AC027612.6	Clone_based_vega_gene	ENSG00000143429				9	0	0	1	5	83.3333
ANKRD36C	0	genome.wustl.edu	37	2	96517882	96517882	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	96517882	96517882	G	A	SNP	ANKRD36C	ENST00000456556	human	ensembl	74_37	-1	known	silent	c.5211	p.D1737	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36C	HGNC	ENSG00000174501				24	0	0	36	6	14.2857
SDCBP2	0	genome.wustl.edu	37	20	1293318	1293318	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	1293318	1293318	C	T	SNP	SDCBP2	ENST00000339987	human	ensembl	74_37	-1	known	missense	c.473	p.R158H	0.794	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SDCBP2	HGNC	ENSG00000125775				89	0	0	69	27	28.125
SEL1L2	0	genome.wustl.edu	37	20	13856737	13856737	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	13856737	13856737	C	T	SNP	SEL1L2	ENST00000284951	human	ensembl	74_37	-1	known	missense	c.1051	p.V351M	1.000	pfam_Sel1-like,smart_Sel1-like	pfam_Sel1-like,smart_Sel1-like	-	no_errors	SEL1L2	HGNC	ENSG00000101251				145	0	0	171	11	6.04396
ZCCHC3	0	genome.wustl.edu	37	20	279294	279294	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	279294	279294	G	A	SNP	ZCCHC3	ENST00000382352	human	ensembl	74_37	+1	known	missense	c.1067	p.R356K	1.000	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC3	HGNC	ENSG00000177764				107	0	0	130	13	9.09091
L3MBTL1	0	genome.wustl.edu	37	20	42164925	42164925	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	42164925	42164925	A	G	SNP	L3MBTL1	ENST00000418998	human	ensembl	74_37	+1	known	missense	c.2048	p.H683R	1.000	NULL	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513				45	0	0	45	8	15.0943
SLC12A5	0	genome.wustl.edu	37	20	44666018	44666018	+	Silent	SNP	C	C	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	44666018	44666018	C	A	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	silent	c.675	p.I225	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140				46	0	0	44	5	10.2041
SLC12A5	0	genome.wustl.edu	37	20	44669249	44669249	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	44669249	44669249	T	G	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	missense	c.919	p.F307V	1.000	prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140				87	0	0	98	15	13.2743
EYA2	0	genome.wustl.edu	37	20	45812032	45812032	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	45812032	45812032	C	T	SNP	EYA2	ENST00000327619	human	ensembl	74_37	+1	known	missense	c.1529	p.A510V	0.992	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA2	HGNC	ENSG00000064655				92	0	0	77	8	9.41176
GNAS	0	genome.wustl.edu	37	20	57428503	57428503	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	57428503	57428503	C	T	SNP	GNAS	ENST00000371100	human	ensembl	74_37	+1	putative	silent	c.183	p.V61	0.006	NULL	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460				30	0	0	21	5	19.2308
ZNF831	0	genome.wustl.edu	37	20	57766605	57766605	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	57766605	57766605	C	T	SNP	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	silent	c.531	p.C177	0.858	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203				231	0	0	169	27	13.7755
CHRNA4	0	genome.wustl.edu	37	20	61981615	61981615	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	20	61981615	61981615	C	T	SNP	CHRNA4	ENST00000370263	human	ensembl	74_37	-1	known	missense	c.1148	p.R383H	0.330	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA4	HGNC	ENSG00000101204				43	0	0	16	5	23.8095
DSCAM	0	genome.wustl.edu	37	21	41711215	41711215	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	21	41711215	41711215	C	T	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	silent	c.1338	p.P446	0.006	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587				98	0	0	42	19	31.1475
TRPM2	0	genome.wustl.edu	37	21	45811283	45811283	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	21	45811283	45811283	C	T	SNP	TRPM2	ENST00000300482	human	ensembl	74_37	+1	known	silent	c.1569	p.Y523	0.014	NULL	pfam_Ion_trans_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	TRPM2	HGNC	ENSG00000142185				182	0	0	107	17	13.7097
MICAL3	0	genome.wustl.edu	37	22	18300777	18300777	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	22	18300777	18300777	C	T	SNP	MICAL3	ENST00000441493	human	ensembl	74_37	-1	known	nonsense	c.4650	p.W1550*	1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156				48	0	0	24	8	25
GNB1L	0	genome.wustl.edu	37	22	19808157	19808157	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	22	19808157	19808157	C	T	SNP	GNB1L	ENST00000329517	human	ensembl	74_37	-1	known	nonsense	c.218	p.W73*	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GNB1L	HGNC	ENSG00000185838				89	0	0	52	7	11.8644
PATZ1	0	genome.wustl.edu	37	22	31741404	31741404	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	22	31741404	31741404	C	T	SNP	PATZ1	ENST00000266269	human	ensembl	74_37	-1	known	missense	c.185	p.C62Y	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	PATZ1	HGNC	ENSG00000100105				47	0	0	23	4	14.8148
FOXRED2	0	genome.wustl.edu	37	22	36892110	36892110	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	22	36892110	36892110	C	T	SNP	FOXRED2	ENST00000216187	human	ensembl	74_37	-1	known	missense	c.1528	p.V510I	0.979	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FOXRED2	HGNC	ENSG00000100350				99	0	0	57	8	12.3077
MKL1	0	genome.wustl.edu	37	22	40831511	40831511	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	22	40831511	40831511	G	A	SNP	MKL1	ENST00000355630	human	ensembl	74_37	-1	known	missense	c.55	p.R19W	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL1	HGNC	ENSG00000196588				108	0	0	78	12	13.3333
ZC3H7B	0	genome.wustl.edu	37	22	41726091	41726091	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	22	41726091	41726091	C	T	SNP	ZC3H7B	ENST00000351589	human	ensembl	74_37	+1	known	missense	c.509	p.A170V	0.998	NULL	pfam_Znf_CCCH,pfam_TPR_1,smart_TPR_repeat,smart_Znf_CCCH,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ZC3H7B	HGNC	ENSG00000100403				85	0	0	57	13	18.5714
SBF1	0	genome.wustl.edu	37	22	50904463	50904463	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	22	50904463	50904463	G	A	SNP	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	missense	c.938	p.T313I	0.922	NULL	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241				162	0	0	144	19	11.6564
BBX	0	genome.wustl.edu	37	3	107492466	107492466	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	107492466	107492466	G	A	SNP	BBX	ENST00000325805	human	ensembl	74_37	+1	known	missense	c.1898	p.R633Q	1.000	NULL	pfam_TF_HMG_box_BBX_DUF2028,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	BBX	HGNC	ENSG00000114439				51	0	0	29	5	14.7059
STXBP5L	0	genome.wustl.edu	37	3	120673881	120673881	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	120673881	120673881	G	A	SNP	STXBP5L	ENST00000273666	human	ensembl	74_37	+1	known	missense	c.284	p.R95Q	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C_dom,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5L	HGNC	ENSG00000145087				34	0	0	16	4	20
IGSF10	0	genome.wustl.edu	37	3	151164474	151164474	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	151164474	151164474	A	G	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	missense	c.3295	p.S1099P	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580				165	0	0	146	21	12.5749
P2RY1	0	genome.wustl.edu	37	3	152554155	152554155	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	152554155	152554155	G	A	SNP	P2RY1	ENST00000305097	human	ensembl	74_37	+1	known	missense	c.584	p.R195H	0.164	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y1_rcpt,prints_GPCR_Rhodpsn	-	no_errors	P2RY1	HGNC	ENSG00000169860				137	0	0	97	14	12.6126
CHRD	0	genome.wustl.edu	37	3	184102983	184102983	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	184102983	184102983	C	T	SNP	CHRD	ENST00000204604	human	ensembl	74_37	+1	known	missense	c.1775	p.T592M	0.570	pfam_CHRD,smart_CHRD,pirsf_Chordin,pfscan_CHRD	pfam_CHRD,pfam_VWF_C,smart_VWF_C,smart_CHRD,pirsf_Chordin,pfscan_CHRD,pfscan_VWF_C	-	no_errors	CHRD	HGNC	ENSG00000090539				171	0	0	123	18	12.766
MUC4	0	genome.wustl.edu	37	3	195479288	195479288	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	195479288	195479288	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.15538	p.L5180F	0.665	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				106	0	0	79	5	5.95238
MUC4	0	genome.wustl.edu	37	3	195508174	195508174	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	195508174	195508174	G	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.10277	p.P3426H	0.275	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				15	0	0	18	3	14.2857
SDHAP1	0	genome.wustl.edu	37	3	195692349	195692349	+	RNA	SNP	T	T	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	195692349	195692349	T	A	SNP	SDHAP1	ENST00000354559	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SDHAP1	HGNC	ENSG00000185485				23	0	0	19	3	13.6364
KAT2B	0	genome.wustl.edu	37	3	20167554	20167554	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	20167554	20167554	A	G	SNP	KAT2B	ENST00000263754	human	ensembl	74_37	+1	known	missense	c.1571	p.H524R	1.000	pirsf_Hist_acetylase_PCAF,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom	-	no_errors	KAT2B	HGNC	ENSG00000114166				30	0	0	17	5	22.7273
STAB1	0	genome.wustl.edu	37	3	52548194	52548194	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	52548194	52548194	C	A	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.3511	p.R1171S	0.059	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327				125	0	0	54	23	29.8701
SRGAP3	0	genome.wustl.edu	37	3	9166433	9166433	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	9166433	9166433	C	T	SNP	SRGAP3	ENST00000383836	human	ensembl	74_37	-1	known	missense	c.236	p.R79H	1.000	pfam_FCH_dom,smart_FCH_dom,pfscan_FCH_dom	pfam_RhoGAP_dom,pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_FCH_dom,smart_RhoGAP_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	SRGAP3	HGNC	ENSG00000196220				103	0	0	57	14	19.7183
OR5K1	0	genome.wustl.edu	37	3	98189089	98189089	+	Silent	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	98189089	98189089	T	C	SNP	OR5K1	ENST00000332650	human	ensembl	74_37	+1	known	silent	c.669	p.L223	0.023	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5K1	HGNC	ENSG00000232382				75	0	0	54	11	16.9231
DCBLD2	0	genome.wustl.edu	37	3	98541094	98541094	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	3	98541094	98541094	C	T	SNP	DCBLD2	ENST00000326857	human	ensembl	74_37	-1	known	missense	c.808	p.A270T	1.000	pfam_LCCL,superfamily_LCCL,smart_LCCL,pfscan_LCCL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_CUB_dom,pfam_LCCL,superfamily_Galactose-bd-like,superfamily_CUB_dom,superfamily_LCCL,smart_CUB_dom,smart_LCCL,smart_Coagulation_fac_5/8-C_type_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_LCCL	-	no_errors	DCBLD2	HGNC	ENSG00000057019				36	0	0	24	3	11.1111
FAT4	0	genome.wustl.edu	37	4	126355435	126355435	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	4	126355435	126355435	G	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.7054	p.V2352I	0.969	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				95	0	0	67	9	11.8421
PCDH10	0	genome.wustl.edu	37	4	134071538	134071538	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	4	134071538	134071538	C	T	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	silent	c.243	p.R81	0.998	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650				165	0	0	115	15	11.5385
PDE6B	0	genome.wustl.edu	37	4	629698	629698	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	4	629698	629698	G	A	SNP	PDE6B	ENST00000496514	human	ensembl	74_37	+1	known	silent	c.651	p.T217	0.066	smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6B	HGNC	ENSG00000133256				79	0	0	52	9	14.7541
EPHA5	0	genome.wustl.edu	37	4	66286260	66286260	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	4	66286260	66286260	T	C	SNP	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	missense	c.1426	p.K476E	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242				37	0	0	60	8	11.7647
EPHA5	0	genome.wustl.edu	37	4	66356378	66356378	+	Silent	SNP	G	G	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	4	66356378	66356378	G	T	SNP	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	silent	c.1119	p.V373	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Fibronectin_type3,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242				56	0	0	49	8	14.0351
ACOX3	0	genome.wustl.edu	37	4	8398823	8398823	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	4	8398823	8398823	C	T	SNP	ACOX3	ENST00000356406	human	ensembl	74_37	-1	known	silent	c.897	p.A299	0.002	superfamily_AcylCo_DH/oxidase_C,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_AcylCo_DH/oxidase_C,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX3	HGNC	ENSG00000087008				85	0	0	48	8	14.2857
SLC12A2	0	genome.wustl.edu	37	5	127522234	127522234	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	5	127522234	127522234	A	G	SNP	SLC12A2	ENST00000262461	human	ensembl	74_37	+1	known	missense	c.3550	p.M1184V	1.000	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt1,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A2	HGNC	ENSG00000064651				122	1	0.813008	63	4	5.97015
DNAH5	0	genome.wustl.edu	37	5	13829731	13829731	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	5	13829731	13829731	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.6332	p.R2111H	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				123	0	0	73	45	38.1356
PCDHA8	0	genome.wustl.edu	37	5	140222280	140222280	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	5	140222280	140222280	C	T	SNP	PCDHA8	ENST00000531613	human	ensembl	74_37	+1	known	silent	c.1374	p.P458	0.001	superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962				187	0	0	94	23	19.6581
PCDHB16	0	genome.wustl.edu	37	5	140564268	140564268	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	5	140564268	140564268	C	T	SNP	PCDHB16	ENST00000361016	human	ensembl	74_37	+1	known	missense	c.2134	p.R712W	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963				282	2	0.704225	135	26	16.1491
PCDHGA12	0	genome.wustl.edu	37	5	140812194	140812194	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	5	140812194	140812194	C	T	SNP	PCDHGA12	ENST00000252085	human	ensembl	74_37	+1	known	missense	c.1868	p.T623M	0.840	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA12	HGNC	ENSG00000253159				139	0	0	74	25	25.2525
ATP10B	0	genome.wustl.edu	37	5	159992888	159992888	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	5	159992888	159992888	G	A	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	nonsense	c.3958	p.Q1320*	0.859	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322				106	0	0	50	12	19.3548
CDH12	0	genome.wustl.edu	37	5	21765106	21765106	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	5	21765106	21765106	T	C	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	missense	c.1496	p.E499G	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162				108	0	0	82	11	11.828
C5orf38	0	genome.wustl.edu	37	5	2755204	2755204	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	5	2755204	2755204	G	A	SNP	C5orf38	ENST00000397835	human	ensembl	74_37	+1	putative	missense	c.395	p.R132Q	0.008	NULL	NULL	-	no_errors	C5orf38	HGNC	ENSG00000186493				111	0	0	91	26	22.2222
ECHDC1	0	genome.wustl.edu	37	6	127648195	127648195	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	6	127648195	127648195	G	C	SNP	ECHDC1	ENST00000531967	human	ensembl	74_37	-1	known	missense	c.333	p.F111L	0.997	pfam_Crotonase_core_superfam	pfam_Crotonase_core_superfam	-	no_errors	ECHDC1	HGNC	ENSG00000093144				89	0	0	60	11	15.493
SYNE1	0	genome.wustl.edu	37	6	152631626	152631626	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	6	152631626	152631626	T	G	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.16924	p.K5642Q	0.972	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				58	0	0	44	11	20
NKAPL	0	genome.wustl.edu	37	6	28227351	28227351	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	6	28227351	28227351	C	T	SNP	NKAPL	ENST00000343684	human	ensembl	74_37	+1	known	missense	c.202	p.R68C	0.000	NULL	pfam_DUF926	-	no_errors	NKAPL	HGNC	ENSG00000189134				107	0	0	65	9	12.1622
TCF19	0	genome.wustl.edu	37	6	31130593	31130593	+	RNA	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	6	31130593	31130593	G	A	SNP	TCF19	ENST00000496421	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.726	-	-	-	no_errors	TCF19	HGNC	ENSG00000137310				10	0	0	7	6	46.1538
DST	0	genome.wustl.edu	37	6	56471761	56471761	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	6	56471761	56471761	T	A	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.7566	p.E2522D	0.005	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				78	0	0	52	7	11.8644
HTR1E	0	genome.wustl.edu	37	6	87725622	87725622	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	6	87725622	87725622	G	A	SNP	HTR1E	ENST00000305344	human	ensembl	74_37	+1	known	silent	c.570	p.A190	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR1E	HGNC	ENSG00000168830				95	0	0	59	13	18.0556
GRM8	0	genome.wustl.edu	37	7	126086219	126086219	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	7	126086219	126086219	C	T	SNP	GRM8	ENST00000339582	human	ensembl	74_37	-1	known	missense	c.2638	p.E880K	1.000	prints_GPCR_3_mtglu_rcpt_4	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_8,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4,pfscan_GPCR_3_C	-	no_errors	GRM8	HGNC	ENSG00000179603				114	0	0	75	16	17.5824
CHRM2	0	genome.wustl.edu	37	7	136700439	136700439	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	7	136700439	136700439	A	G	SNP	CHRM2	ENST00000320658	human	ensembl	74_37	+1	known	missense	c.827	p.Q276R	0.965	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M2_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M2_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM2	HGNC	ENSG00000181072				88	0	0	61	12	16.4384
UBN2	0	genome.wustl.edu	37	7	138968977	138968977	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	7	138968977	138968977	C	T	SNP	UBN2	ENST00000473989	human	ensembl	74_37	+1	known	missense	c.3326	p.P1109L	0.997	NULL	NULL	-	no_errors	UBN2	HGNC	ENSG00000157741				125	0	0	91	7	7.14286
FASTK	0	genome.wustl.edu	37	7	150776935	150776935	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	7	150776935	150776935	G	C	SNP	FASTK	ENST00000297532	human	ensembl	74_37	-1	known	missense	c.157	p.L53V	1.000	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTK	HGNC	ENSG00000164896				20	0	0	11	6	35.2941
HOXA9	0	genome.wustl.edu	37	7	27204564	27204564	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	7	27204564	27204564	G	A	SNP	HOXA9	ENST00000343483	human	ensembl	74_37	-1	known	silent	c.513	p.S171	1.000	pfam_Hox9_activation_N,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXA9	HGNC	ENSG00000078399				67	0	0	32	16	33.3333
GLI3	0	genome.wustl.edu	37	7	42088263	42088263	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	7	42088263	42088263	G	A	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.506	p.P169L	0.933	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				63	0	0	45	13	22.4138
CHCHD2	0	genome.wustl.edu	37	7	56170694	56170694	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	7	56170694	56170694	C	T	SNP	CHCHD2	ENST00000395422	human	ensembl	74_37	-1	known	missense	c.311	p.G104E	0.943	NULL	pfam_CHCH	-	no_errors	CHCHD2	HGNC	ENSG00000106153				58	0	0	54	9	14.2857
RNF216	0	genome.wustl.edu	37	7	5769126	5769126	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	7	5769126	5769126	G	A	SNP	RNF216	ENST00000389902	human	ensembl	74_37	-1	known	silent	c.1326	p.L442	1.000	NULL	smart_Znf_C6HC	-	no_errors	RNF216	HGNC	ENSG00000011275				142	1	0.699301	88	18	16.9811
EIF2AK1	0	genome.wustl.edu	37	7	6066556	6066556	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	7	6066556	6066556	G	A	SNP	EIF2AK1	ENST00000199389	human	ensembl	74_37	-1	known	missense	c.1567	p.L523F	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK1	HGNC	ENSG00000086232				129	0	0	98	15	13.2743
RIMS2	0	genome.wustl.edu	37	8	104898096	104898096	+	Silent	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	104898096	104898096	T	C	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	silent	c.1269	p.S423	0.998	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406				79	0	0	56	24	30
SOX7	0	genome.wustl.edu	37	8	10584132	10584132	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	10584132	10584132	C	T	SNP	SOX7	ENST00000553390	human	ensembl	74_37	-1	known	missense	c.439	p.V147M	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,pfscan_HMG_box_dom	pfam_Sox_C_TAD,pfam_G_patch_dom,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_HMG_box_dom	-	no_errors	SOX7	HGNC	ENSG00000171056				79	0	0	45	16	26.2295
TBC1D31	0	genome.wustl.edu	37	8	124096454	124096454	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	124096454	124096454	G	A	SNP	TBC1D31	ENST00000287380	human	ensembl	74_37	+1	known	silent	c.393	p.S131	0.235	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Rab-GTPase-TBC_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Rab-GTPase-TBC_dom,smart_WD40_repeat,pfscan_Rab-GTPase-TBC_dom,pfscan_WD40_repeat_dom	-	no_errors	TBC1D31	HGNC	ENSG00000156787				136	0	0	128	37	22.4242
KIAA0196	0	genome.wustl.edu	37	8	126056089	126056089	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	126056089	126056089	G	A	SNP	KIAA0196	ENST00000318410	human	ensembl	74_37	-1	known	missense	c.2828	p.A943V	0.952	pfam_WASH_strumpellin	pfam_WASH_strumpellin,superfamily_Ig_E-set	-	no_errors	KIAA0196	HGNC	ENSG00000164961				40	0	0	42	5	10.6383
COL22A1	0	genome.wustl.edu	37	8	139890073	139890073	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	139890073	139890073	T	C	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	missense	c.578	p.K193R	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436				74	0	0	60	11	15.493
GPR20	0	genome.wustl.edu	37	8	142367371	142367371	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	142367371	142367371	C	T	SNP	GPR20	ENST00000377741	human	ensembl	74_37	-1	known	missense	c.653	p.R218H	0.136	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR20	HGNC	ENSG00000204882				10	0	0	10	5	33.3333
NAPRT1	0	genome.wustl.edu	37	8	144659014	144659014	+	Splice_Site	SNP	T	T	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	144659014	144659014	T	A	SNP	NAPRT1	ENST00000276844	human	ensembl	74_37	-1	known	splice_site	c.685-2	e6-2	0.917	-	-	-	no_errors	NAPRT1	HGNC	ENSG00000147813				28	0	0	21	14	40
PRKDC	0	genome.wustl.edu	37	8	48842451	48842451	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	48842451	48842451	T	C	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.2014	p.I672V	0.859	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				40	0	0	49	8	14.0351
PXDNL	0	genome.wustl.edu	37	8	52370223	52370223	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	52370223	52370223	A	G	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.817	p.S273P	0.999	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485				122	0	0	77	52	40.3101
PREX2	0	genome.wustl.edu	37	8	68864659	68864659	+	Silent	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	68864659	68864659	C	T	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	silent	c.30	p.R10	1.000	superfamily_DH-domain	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889				13	0	0	4	6	60
SULF1	0	genome.wustl.edu	37	8	70515528	70515528	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	70515528	70515528	T	C	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.1163	p.L388P	1.000	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573				154	1	0.645161	105	67	38.9535
MSC	0	genome.wustl.edu	37	8	72754837	72754837	+	RNA	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	72754837	72754837	C	T	SNP	MSC	ENST00000518440	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.065	-	-	-	no_errors	MSC	HGNC	ENSG00000178860				346	0	0	341	55	13.8889
SLC26A7	0	genome.wustl.edu	37	8	92407455	92407455	+	RNA	SNP	T	T	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	8	92407455	92407455	T	A	SNP	SLC26A7	ENST00000520249	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	SLC26A7	HGNC	ENSG00000147606				40	0	0	28	6	17.6471
BARHL1	0	genome.wustl.edu	37	9	135458231	135458231	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	9	135458231	135458231	G	A	SNP	BARHL1	ENST00000263610	human	ensembl	74_37	+1	known	missense	c.47	p.R16H	0.998	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	BARHL1	HGNC	ENSG00000125492				134	0	0	82	17	17.1717
C9orf116	0	genome.wustl.edu	37	9	138387363	138387363	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	9	138387363	138387363	G	A	SNP	C9orf116	ENST00000371789	human	ensembl	74_37	-1	known	missense	c.275	p.S92L	0.000	NULL	NULL	-	no_errors	C9orf116	HGNC	ENSG00000160345				107	0	0	66	11	14.2857
LOC100996870	0	genome.wustl.edu	37	9	66459924	66459924	+	RNA	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	9	66459924	66459924	C	T	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				15	0	0	9	3	25
ROR2	0	genome.wustl.edu	37	9	94493380	94493380	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	9	94493380	94493380	T	A	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	missense	c.995	p.K332M	1.000	pirsf_Tyr_kinase_rcpt_ROR,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR2	HGNC	ENSG00000169071				111	0	0	92	13	12.381
ENSG00000238421	0	genome.wustl.edu	37	GL000192.1	545095	545095	+	RNA	SNP	G	G	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	GL000192.1	545095	545095	G	C	SNP	ENSG00000238421	ENST00000459549	human	ensembl	74_37	-1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors	U1	RFAM	ENSG00000238421				12	0	0	13	4	23.5294
ENSG00000264001	0	genome.wustl.edu	37	GL000230.1	19124	19124	+	RNA	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	GL000230.1	19124	19124	G	A	SNP	ENSG00000264001	ENST00000585288	human	ensembl	74_37	+1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors	CT867976.3	Clone_based_ensembl_gene	ENSG00000264001				9	0	0	2	2	50
MT-TF	0	genome.wustl.edu	37	MT	634	634	+	RNA	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	MT	634	634	T	C	SNP	MT-TF	ENST00000387314	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TF	HGNC	ENSG00000210049				595	0	0	84	70	45.4545
KIAA1210	0	genome.wustl.edu	37	X	118239097	118239097	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	X	118239097	118239097	C	T	SNP	KIAA1210	ENST00000402510	human	ensembl	74_37	-1	known	missense	c.926	p.R309H	0.000	NULL	NULL	-	no_errors	KIAA1210	HGNC	ENSG00000250423				105	0	0	48	24	33.3333
GPR112	0	genome.wustl.edu	37	X	135430104	135430104	+	Silent	SNP	T	T	G			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	X	135430104	135430104	T	G	SNP	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	silent	c.4239	p.T1413	0.567	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920				82	0	0	45	24	34.7826
UBL4A	0	genome.wustl.edu	37	X	153713953	153713953	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	X	153713953	153713953	G	A	SNP	UBL4A	ENST00000369660	human	ensembl	74_37	-1	known	silent	c.399	p.D133	1.000	NULL	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBL4A	HGNC	ENSG00000102178				96	0	0	60	33	35.4839
KLHL34	0	genome.wustl.edu	37	X	21675868	21675868	+	Silent	SNP	G	G	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	X	21675868	21675868	G	A	SNP	KLHL34	ENST00000379499	human	ensembl	74_37	-1	known	silent	c.39	p.G13	0.997	superfamily_BTB/POZ_fold,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL34	HGNC	ENSG00000185915				39	0	0	22	4	15.3846
FAM104B	0	genome.wustl.edu	37	X	55185632	55185632	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	X	55185632	55185632	C	A	SNP	FAM104B	ENST00000332132	human	ensembl	74_37	-1	known	missense	c.50	p.G17V	0.001	NULL	NULL	-	no_errors	FAM104B	HGNC	ENSG00000182518				34	0	0	18	3	14.2857
NAP1L3	0	genome.wustl.edu	37	X	92926799	92926799	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	X	92926799	92926799	T	C	SNP	NAP1L3	ENST00000373079	human	ensembl	74_37	-1	known	missense	c.1505	p.K502R	0.003	NULL	pfam_NAP_family	-	no_errors	NAP1L3	HGNC	ENSG00000186310				19	0	0	6	3	33.3333
TMEM82	0	genome.wustl.edu	37	1	16070918	16070918	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	1	16070918	16070918	C	-	DEL	TMEM82	ENST00000375782	human	ensembl	74_37	+1	known	frame_shift_del	c.600	p.Q202fs	0.901	NULL	NULL	-	no_errors	TMEM82	HGNC	ENSG00000162460				21	0	0	16	2	11.1111
MUC6	0	genome.wustl.edu	37	11	1016296	1016305	+	Frame_Shift_Del	DEL	GGGCGGACAC	GGGCGGACAC	-			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	GGGCGGACAC	GGGCGGACAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	11	1016296	1016305	GGGCGGACAC	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	frame_shift_del	c.6505_6496	p.V2166fs	0.000:0.000:0.000:0.000:0.000:0.003:0.000:0.001:0.000:0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				34	0	0	24	5	17.2414
PTHLH	0	genome.wustl.edu	37	12	28114898	28114898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	12	28114898	28114898	T	-	DEL	PTHLH	ENST00000354417	human	ensembl	74_37	-1	known	frame_shift_del	c.557	p.K186fs	0.135	NULL	pfam_PTH/PTH-rel,smart_PTH/PTH-rel	-	no_errors	PTHLH	HGNC	ENSG00000087494				14	0	0	12	3	20
TP53	0	genome.wustl.edu	37	17	7576928	7576928	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	17	7576928	7576928	T	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	splice_site_del	c.920-2	e8-2	0.960	-	-	-	no_errors	TP53	HGNC	ENSG00000141510				99	0	0	52	19	26.7606
C2orf76	0	genome.wustl.edu	37	2	120069281	120069282	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	2	120069281	120069282	-	A	INS	C2orf76	ENST00000334816	human	ensembl	74_37	-1	known	splice_site_ins	c.223-3_223-2	e4-2	0.984:0.405	-	-	-	no_errors	C2orf76	HGNC	ENSG00000186132				29	0	0	22	2	8.33333
REV3L	0	genome.wustl.edu	37	6	111688795	111688796	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	6	111688795	111688796	-	A	INS	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	frame_shift_ins	c.6196_6195	p.T2065fs	1.000:0.992	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413				171	0	0	110	20	15.3846
MT-ND5	0	genome.wustl.edu	37	MT	12418	12418	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GC-01A-12D-A25D-08	TCGA-HU-A4GC-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	df673ef5-5935-432a-923c-963d4727b36c	91d82e57-a018-445f-adb3-f60013cf42c5	MT	12418	12418	A	-	DEL	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	frame_shift_del	c.82	p.N30fs	NULL	tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786				583	1	0.171233	107	54	33.5404
