Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ENSG00000203849	0	genome.wustl.edu	37	1	142713774	142713774	+	RNA	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	142713774	142713774	A	G	SNP	ENSG00000203849	ENST00000369381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.042	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849				61	0	0	50	7	12.2807
NBPF10	0	genome.wustl.edu	37	1	145296373	145296373	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	145296373	145296373	G	T	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.295	p.V99F	0.000	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386				103	1	0.961538	143	9	5.92105
ECM1	0	genome.wustl.edu	37	1	150483401	150483401	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	150483401	150483401	G	A	SNP	ECM1	ENST00000369049	human	ensembl	74_37	+1	known	nonsense	c.516	p.W172*	0.007	pfam_ECM1	pfam_ECM1,superfamily_Serum_albumin-like	-	no_errors	ECM1	HGNC	ENSG00000143369				158	0	0	300	61	16.8975
ECM1	0	genome.wustl.edu	37	1	150483459	150483459	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	150483459	150483459	G	C	SNP	ECM1	ENST00000369049	human	ensembl	74_37	+1	known	missense	c.574	p.D192H	1.000	pfam_ECM1	pfam_ECM1,superfamily_Serum_albumin-like	-	no_errors	ECM1	HGNC	ENSG00000143369				258	0	0	420	80	16
ECM1	0	genome.wustl.edu	37	1	150483497	150483497	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	150483497	150483497	G	A	SNP	ECM1	ENST00000369049	human	ensembl	74_37	+1	known	silent	c.612	p.L204	0.988	pfam_ECM1	pfam_ECM1,superfamily_Serum_albumin-like	-	no_errors	ECM1	HGNC	ENSG00000143369				310	1	0.321543	439	79	15.251
ECM1	0	genome.wustl.edu	37	1	150483588	150483588	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	150483588	150483588	G	A	SNP	ECM1	ENST00000369049	human	ensembl	74_37	+1	known	missense	c.703	p.E235K	0.012	pfam_ECM1	pfam_ECM1,superfamily_Serum_albumin-like	-	no_errors	ECM1	HGNC	ENSG00000143369				206	0	0	424	86	16.8627
ECM1	0	genome.wustl.edu	37	1	150483691	150483691	+	RNA	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	150483691	150483691	G	A	SNP	ECM1	ENST00000470432	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ECM1	HGNC	ENSG00000143369				101	0	0	198	47	19.1837
ECM1	0	genome.wustl.edu	37	1	150483912	150483912	+	RNA	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	150483912	150483912	G	A	SNP	ECM1	ENST00000470432	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	ECM1	HGNC	ENSG00000143369				233	0	0	272	71	20.6997
ECM1	0	genome.wustl.edu	37	1	150484238	150484238	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	150484238	150484238	G	A	SNP	ECM1	ENST00000369049	human	ensembl	74_37	+1	known	silent	c.1095	p.L365	0.761	pfam_ECM1	pfam_ECM1,superfamily_Serum_albumin-like	-	no_errors	ECM1	HGNC	ENSG00000143369				64	0	0	110	30	21.4286
ECM1	0	genome.wustl.edu	37	1	150484301	150484301	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	150484301	150484301	G	T	SNP	ECM1	ENST00000369049	human	ensembl	74_37	+1	known	missense	c.1158	p.W386C	0.994	pfam_ECM1,superfamily_Serum_albumin-like	pfam_ECM1,superfamily_Serum_albumin-like	-	no_errors	ECM1	HGNC	ENSG00000143369				75	0	0	103	28	21.374
ATP8B2	0	genome.wustl.edu	37	1	154316453	154316453	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	154316453	154316453	C	T	SNP	ATP8B2	ENST00000368489	human	ensembl	74_37	+1	known	missense	c.1942	p.R648C	0.012	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B2	HGNC	ENSG00000143515				59	0	0	8	37	82.2222
FBLIM1	0	genome.wustl.edu	37	1	16101285	16101285	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	16101285	16101285	T	G	SNP	FBLIM1	ENST00000441801	human	ensembl	74_37	+1	known	missense	c.884	p.F295C	1.000	pfam_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	FBLIM1	HGNC	ENSG00000162458				152	0	0	81	7	7.95455
QSOX1	0	genome.wustl.edu	37	1	180158716	180158716	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	180158716	180158716	C	G	SNP	QSOX1	ENST00000367602	human	ensembl	74_37	+1	known	missense	c.1047	p.N349K	1.000	NULL	pfam_ERV/ALR_sulphydryl_oxidase,pfam_Thioredoxin_domain,superfamily_ERV/ALR_sulphydryl_oxidase,superfamily_Thioredoxin-like_fold	-	no_errors	QSOX1	HGNC	ENSG00000116260				170	0	0	18	72	80
MRTO4	0	genome.wustl.edu	37	1	19583562	19583562	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	19583562	19583562	T	A	SNP	MRTO4	ENST00000330263	human	ensembl	74_37	+1	known	missense	c.196	p.F66I	1.000	pfam_Ribosomal_L10/acidic_P0	pfam_Ribosomal_L10/acidic_P0	-	no_errors	MRTO4	HGNC	ENSG00000053372				371	0	0	102	121	54.2601
OR2T2	0	genome.wustl.edu	37	1	248616749	248616749	+	Silent	SNP	C	C	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	248616749	248616749	C	G	SNP	OR2T2	ENST00000342927	human	ensembl	74_37	+1	known	silent	c.651	p.V217	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240				54	0	0	16	5	23.8095
OR2T2	0	genome.wustl.edu	37	1	248616764	248616764	+	Silent	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	248616764	248616764	C	T	SNP	OR2T2	ENST00000342927	human	ensembl	74_37	+1	known	silent	c.666	p.I222	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240				44	0	0	14	5	26.3158
PPIE	0	genome.wustl.edu	37	1	40208945	40208945	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	40208945	40208945	A	G	SNP	PPIE	ENST00000324379	human	ensembl	74_37	+1	known	missense	c.259	p.I87V	1.000	pirsf_Cyclophilin-type_PPIase_E	pfam_Cyclophilin-like_PPIase_dom,pfam_RRM_dom,superfamily_Cyclophilin-like_PPIase_dom,smart_RRM_dom,pirsf_Cyclophilin-type_PPIase_E,pfscan_RRM_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIE	HGNC	ENSG00000084072				59	0	0	49	5	9.25926
ACADM	0	genome.wustl.edu	37	1	76198785	76198785	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	76198785	76198785	G	A	SNP	ACADM	ENST00000370834	human	ensembl	74_37	+1	novel	silent	c.336	p.A112	0.010	superfamily_AcylCoA_DH/oxidase_NM_dom	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	ACADM	HGNC	ENSG00000117054				74	0	0	36	2	5.26316
RBMXL1	0	genome.wustl.edu	37	1	89448701	89448701	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	1	89448701	89448701	C	T	SNP	RBMXL1	ENST00000321792	human	ensembl	74_37	-1	known	missense	c.809	p.R270H	1.000	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL1	HGNC	ENSG00000213516				260	0	0	125	53	29.7753
SFR1	0	genome.wustl.edu	37	10	105883872	105883872	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	10	105883872	105883872	A	T	SNP	SFR1	ENST00000336358	human	ensembl	74_37	+1	known	missense	c.722	p.Y241F	1.000	pfam_Ds-recomb_repair_prot_Mei5	pfam_Ds-recomb_repair_prot_Mei5	-	no_errors	SFR1	HGNC	ENSG00000156384				54	0	0	34	2	5.55556
FRG2B	0	genome.wustl.edu	37	10	135440184	135440184	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	10	135440184	135440184	C	A	SNP	FRG2B	ENST00000425520	human	ensembl	74_37	-1	known	missense	c.63	p.Q21H	0.051	NULL	NULL	-	no_errors	FRG2B	HGNC	ENSG00000225899				266	0	0	196	13	6.2201
ARHGAP12	0	genome.wustl.edu	37	10	32098152	32098152	+	RNA	SNP	T	T	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	10	32098152	32098152	T	G	SNP	ARHGAP12	ENST00000493008	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	ARHGAP12	HGNC	ENSG00000165322				55	0	0	32	39	54.9296
ZNF33B	0	genome.wustl.edu	37	10	43127820	43127820	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	10	43127820	43127820	C	G	SNP	ZNF33B	ENST00000359467	human	ensembl	74_37	-1	known	missense	c.77	p.W26S	1.000	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33B	HGNC	ENSG00000196693				89	0	0	30	19	38.7755
ENSG00000231345	0	genome.wustl.edu	37	10	52417929	52417929	+	RNA	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	10	52417929	52417929	C	T	SNP	ENSG00000231345	ENST00000449695	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	RP11-564C4.6	Clone_based_vega_gene	ENSG00000231345				39	0	0	15	10	40
RDX	0	genome.wustl.edu	37	11	110106915	110106915	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	11	110106915	110106915	G	A	SNP	RDX	ENST00000530749	human	ensembl	74_37	-1	known	missense	c.1253	p.A418V	1.000	pirsf_ERM,pfam_ERM_C_dom	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	RDX	HGNC	ENSG00000137710				61	0	0	39	14	26.4151
APLP2	0	genome.wustl.edu	37	11	130011397	130011397	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	11	130011397	130011397	T	C	SNP	APLP2	ENST00000263574	human	ensembl	74_37	+1	known	missense	c.1964	p.I655T	1.000	NULL	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APLP2	HGNC	ENSG00000084234				61	0	0	21	15	41.6667
OPCML	0	genome.wustl.edu	37	11	133402211	133402211	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	11	133402211	133402211	A	T	SNP	OPCML	ENST00000524381	human	ensembl	74_37	-1	known	missense	c.9	p.H3Q	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	OPCML	HGNC	ENSG00000183715				36	0	0	8	9	52.9412
RPL26P30	0	genome.wustl.edu	37	11	2356949	2356949	+	RNA	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	11	2356949	2356949	G	A	SNP	RPL26P30	ENST00000602923	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL26P30	HGNC	ENSG00000236264				198	1	0.502513	48	83	63.3588
IMMP1L	0	genome.wustl.edu	37	11	31484782	31484782	+	Silent	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	11	31484782	31484782	G	C	SNP	IMMP1L	ENST00000278200	human	ensembl	74_37	-1	known	silent	c.42	p.G14	1.000	NULL	pfam_Peptidase_S24_S26,superfamily_Peptidase_S24_S26A/B/C,prints_Pept_S26A_signal_pept_1,tigrfam_Pept_S26A_signal_pept_1	-	no_errors	IMMP1L	HGNC	ENSG00000148950				72	0	0	51	4	7.27273
OR4C15	0	genome.wustl.edu	37	11	55322167	55322167	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	11	55322167	55322167	G	C	SNP	OR4C15	ENST00000314644	human	ensembl	74_37	+1	known	missense	c.385	p.V129L	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939				223	0	0	122	7	5.42636
IRF7	0	genome.wustl.edu	37	11	614318	614318	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	11	614318	614318	T	C	SNP	IRF7	ENST00000330243	human	ensembl	74_37	-1	known	missense	c.574	p.K192E	0.000	NULL	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF7	HGNC	ENSG00000185507				22	0	0	12	4	25
ARFIP2	0	genome.wustl.edu	37	11	6499103	6499103	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	11	6499103	6499103	G	A	SNP	ARFIP2	ENST00000254584	human	ensembl	74_37	-1	known	nonsense	c.715	p.R239*	1.000	pfam_AH_dom,pfscan_AH_dom	pfam_AH_dom,pfscan_AH_dom	-	no_errors	ARFIP2	HGNC	ENSG00000132254				90	0	0	18	44	70.9677
MTNR1B	0	genome.wustl.edu	37	11	92715117	92715117	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	11	92715117	92715117	A	G	SNP	MTNR1B	ENST00000257068	human	ensembl	74_37	+1	known	missense	c.728	p.K243R	0.083	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melatonin_rcpt,prints_Mel_1A_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Melatonin_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Mel_1A_rcpt	-	no_errors	MTNR1B	HGNC	ENSG00000134640				86	0	0	63	7	10
UNG	0	genome.wustl.edu	37	12	109536374	109536374	+	Silent	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	12	109536374	109536374	G	C	SNP	UNG	ENST00000242576	human	ensembl	74_37	+1	known	silent	c.270	p.V90	0.998	NULL	pfam_Uracil-DNA_glycosylase-like,superfamily_Uracil-DNA_glycosylase-like,tigrfam_Ura_DNA_glycsylse	-	no_errors	UNG	HGNC	ENSG00000076248				126	0	0	35	38	52.0548
GCN1L1	0	genome.wustl.edu	37	12	120572458	120572458	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	12	120572458	120572458	G	A	SNP	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	missense	c.7081	p.R2361W	1.000	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154				151	0	0	47	51	52.0408
EIF2B1	0	genome.wustl.edu	37	12	124107237	124107237	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	12	124107237	124107237	G	A	SNP	EIF2B1	ENST00000539951	human	ensembl	74_37	-1	putative	missense	c.584	p.S195L	1.000	NULL	pfam_IF-2B-related	-	no_errors	EIF2B1	HGNC	ENSG00000111361				113	0	0	100	10	9.09091
F10	0	genome.wustl.edu	37	13	113783898	113783898	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	13	113783898	113783898	G	A	SNP	F10	ENST00000375559	human	ensembl	74_37	+1	known	missense	c.203	p.R68H	0.938	pirsf_Pept_S1A_FX,pfam_GLA_domain,superfamily_GLA_domain,smart_GLA_domain,prints_GLA_domain,pfscan_GLA_domain	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,pfam_GLA_domain,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Peptidase_S1,prints_Peptidase_S1A,prints_GLA_domain,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1	-	no_errors	F10	HGNC	ENSG00000126218				116	0	0	79	37	31.8966
LOC101927016	0	genome.wustl.edu	37	13	64321199	64321199	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	13	64321199	64321199	G	C	SNP	LOC101927016	ENST00000453638	human	ensembl	74_37	+1	known	missense	c.266	p.G89A	0.218	NULL	NULL	-	no_errors	AL445989.1	Clone_based_ensembl_gene	ENSG00000226974				99	0	0	91	5	5.20833
LOC101927016	0	genome.wustl.edu	37	13	64321251	64321251	+	Silent	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	13	64321251	64321251	T	C	SNP	LOC101927016	ENST00000453638	human	ensembl	74_37	+1	known	silent	c.318	p.C106	0.892	NULL	NULL	-	no_errors	AL445989.1	Clone_based_ensembl_gene	ENSG00000226974				76	0	0	84	6	6.66667
ENSG00000244306	0	genome.wustl.edu	37	14	19855320	19855320	+	RNA	SNP	C	C	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	14	19855320	19855320	C	A	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306				47	0	0	11	3	21.4286
DHRS2	0	genome.wustl.edu	37	14	24114490	24114490	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	14	24114490	24114490	G	A	SNP	DHRS2	ENST00000344777	human	ensembl	74_37	+1	known	silent	c.882	p.V294	0.002	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DHB_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect	-	no_errors	DHRS2	HGNC	ENSG00000100867				147	0	0	70	4	5.40541
HECTD1	0	genome.wustl.edu	37	14	31647241	31647241	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	14	31647241	31647241	G	A	SNP	HECTD1	ENST00000399332	human	ensembl	74_37	-1	known	silent	c.360	p.A120	1.000	superfamily_ARM-type_fold	pfam_HECT,pfam_Sad1_UNC_C,pfam_Mib_Herc2,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,superfamily_Galactose-bd-like,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT	-	no_errors	HECTD1	HGNC	ENSG00000092148				128	0	0	60	5	7.69231
GPHN	0	genome.wustl.edu	37	14	67610161	67610161	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	14	67610161	67610161	G	A	SNP	GPHN	ENST00000478722	human	ensembl	74_37	+1	known	missense	c.1831	p.E611K	1.000	pfam_Mopterin-bd_dom,superfamily_Mopterin-bd_dom,smart_Mopterin-bd_dom,tigrfam_Mo_cofactor_synthesis	pfam_Mopterin-bd_dom,pfam_MoeA_linker/N,pfam_MoeA_C_domain_IV,superfamily_MoeA_linker/N,superfamily_Mopterin-bd_dom,superfamily_MoeA_C_domain_IV,smart_Mopterin-bd_dom,tigrfam_Mo_cofactor_synthesis	-	no_errors	GPHN	HGNC	ENSG00000171723				174	0	0	46	42	47.7273
IRF2BPL	0	genome.wustl.edu	37	14	77492848	77492848	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	14	77492848	77492848	C	T	SNP	IRF2BPL	ENST00000238647	human	ensembl	74_37	-1	known	missense	c.1288	p.V430M	1.000	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BPL	HGNC	ENSG00000119669				48	0	0	33	4	10.8108
WHAMMP3	0	genome.wustl.edu	37	15	23205184	23205184	+	RNA	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	15	23205184	23205184	G	A	SNP	WHAMMP3	ENST00000400153	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.696	-	-	-	no_errors	WHAMMP3	HGNC	ENSG00000187667				13	0	0	13	3	18.75
WHAMMP3	0	genome.wustl.edu	37	15	23205193	23205193	+	RNA	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	15	23205193	23205193	A	G	SNP	WHAMMP3	ENST00000400153	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WHAMMP3	HGNC	ENSG00000187667				11	0	0	13	3	18.75
PGBD4	0	genome.wustl.edu	37	15	34394921	34394921	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	15	34394921	34394921	C	G	SNP	PGBD4	ENST00000397766	human	ensembl	74_37	+1	known	missense	c.189	p.S63R	0.003	NULL	NULL	-	no_errors	PGBD4	HGNC	ENSG00000182405				91	0	0	19	42	68.8525
MCTP2	0	genome.wustl.edu	37	15	94884108	94884108	+	Silent	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	15	94884108	94884108	G	C	SNP	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	silent	c.924	p.V308	0.220	NULL	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	MCTP2	HGNC	ENSG00000140563				48	0	0	32	2	5.88235
RNA5-8SP2	0	genome.wustl.edu	37	16	33965459	33965459	+	RNA	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	16	33965459	33965459	C	T	SNP	RNA5-8SP2	ENST00000363564	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP2	HGNC	ENSG00000200434				17	0	0	17	5	22.7273
CES1P1	0	genome.wustl.edu	37	16	55794575	55794575	+	RNA	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	16	55794575	55794575	C	T	SNP	CES1P1	ENST00000571348	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	CES1P1	HGNC	ENSG00000228695				30	0	0	22	9	29.0323
PDP2	0	genome.wustl.edu	37	16	66919617	66919617	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	16	66919617	66919617	A	G	SNP	PDP2	ENST00000311765	human	ensembl	74_37	+1	known	missense	c.1430	p.H477R	1.000	superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PDP2	HGNC	ENSG00000172840				47	0	0	45	13	22.4138
DDX19A	0	genome.wustl.edu	37	16	70405340	70405340	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	16	70405340	70405340	C	G	SNP	DDX19A	ENST00000302243	human	ensembl	74_37	+1	known	missense	c.1249	p.P417A	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX19A	HGNC	ENSG00000168872				31	0	0	42	11	20.7547
ZCCHC14	0	genome.wustl.edu	37	16	87445923	87445923	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	16	87445923	87445923	C	T	SNP	ZCCHC14	ENST00000268616	human	ensembl	74_37	-1	known	missense	c.1993	p.V665M	1.000	NULL	pfam_SAM_type1,pfam_Znf_CCHC,superfamily_Phox,superfamily_SAM/pointed,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC14	HGNC	ENSG00000140948				225	0	0	49	71	59.1667
SCARF1	0	genome.wustl.edu	37	17	1542118	1542118	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	1542118	1542118	C	T	SNP	SCARF1	ENST00000263071	human	ensembl	74_37	-1	known	missense	c.1346	p.R449Q	0.005	NULL	pfam_EGF_laminin,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	SCARF1	HGNC	ENSG00000074660				27	0	0	4	12	75
MYO15A	0	genome.wustl.edu	37	17	18039940	18039940	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	18039940	18039940	G	A	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	silent	c.4719	p.A1573	0.012	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				49	0	0	13	33	71.7391
KRT16P1	0	genome.wustl.edu	37	17	18345010	18345010	+	RNA	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	18345010	18345010	C	T	SNP	KRT16P1	ENST00000581027	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.673	-	-	-	no_errors	KRT16P1	HGNC	ENSG00000214856				49	0	0	19	22	53.6585
VTN	0	genome.wustl.edu	37	17	26692243	26692243	+	Silent	SNP	C	C	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	26692243	26692243	C	G	SNP	VTN	ENST00000431468	human	ensembl	74_37	-1	known	silent	c.9	p.G3	0.097	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	VTN	HGNC	ENSG00000109072				27	0	0	21	5	19.2308
KIAA0100	0	genome.wustl.edu	37	17	26970287	26970287	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	26970287	26970287	C	T	SNP	KIAA0100	ENST00000583403	human	ensembl	74_37	-1	known	missense	c.241	p.G81R	0.235	NULL	NULL	-	no_errors	KIAA0100	HGNC	ENSG00000007202				87	0	0	93	6	6.06061
SUPT6H	0	genome.wustl.edu	37	17	27014416	27014416	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	27014416	27014416	C	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.2933	p.A978V	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				64	0	0	49	31	38.75
LOC100131347	0	genome.wustl.edu	37	17	37213317	37213317	+	RNA	SNP	C	C	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	37213317	37213317	C	A	SNP	LOC100131347	ENST00000578423	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CTD-2206N4.4	Clone_based_vega_gene	ENSG00000263818				25	0	0	18	3	14.2857
LOC100131347	0	genome.wustl.edu	37	17	37264203	37264203	+	RNA	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	37264203	37264203	G	A	SNP	LOC100131347	ENST00000578423	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CTD-2206N4.4	Clone_based_vega_gene	ENSG00000263818				16	0	0	18	21	53.8462
KRTAP4-2	0	genome.wustl.edu	37	17	39334187	39334187	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	39334187	39334187	C	T	SNP	KRTAP4-2	ENST00000377726	human	ensembl	74_37	-1	known	missense	c.230	p.R77H	0.056	NULL	NULL	-	no_errors	KRTAP4-2	HGNC	ENSG00000244537				106	0	0	74	74	50
FMNL1	0	genome.wustl.edu	37	17	43320550	43320550	+	Silent	SNP	C	C	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	43320550	43320550	C	A	SNP	FMNL1	ENST00000328118	human	ensembl	74_37	+1	known	silent	c.2076	p.L692	0.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL1	HGNC	ENSG00000184922				213	1	0.46729	96	39	28.8889
CSHL1	0	genome.wustl.edu	37	17	61987473	61987473	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	61987473	61987473	T	C	SNP	CSHL1	ENST00000561003	human	ensembl	74_37	-1	novel	missense	c.271	p.R91G	0.000	NULL	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core	-	no_errors	CSHL1	HGNC	ENSG00000204414				132	0	0	48	53	52.4752
TP53	0	genome.wustl.edu	37	17	7578265	7578265	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	7578265	7578265	A	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.584	p.I195N	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				62	0	0	15	21	58.3333
ANKRD30B	0	genome.wustl.edu	37	18	14851958	14851958	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	18	14851958	14851958	A	T	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	missense	c.3658	p.S1220C	0.003	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777				9	0	0	21	6	22.2222
YES1	0	genome.wustl.edu	37	18	736827	736827	+	Silent	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	18	736827	736827	A	G	SNP	YES1	ENST00000314574	human	ensembl	74_37	-1	known	silent	c.1272	p.N424	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	YES1	HGNC	ENSG00000176105				69	0	0	40	16	28.5714
OAZ1	0	genome.wustl.edu	37	19	2271925	2271925	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	19	2271925	2271925	G	A	SNP	OAZ1	ENST00000322297	human	ensembl	74_37	+1	known	missense	c.433	p.G145S	0.991	pfam_ODC_AZ,superfamily_Acyl_CoA_acyltransferase	pfam_ODC_AZ,superfamily_Acyl_CoA_acyltransferase	-	no_errors	OAZ1	HGNC	ENSG00000104904				23	0	0	10	14	58.3333
SIPA1L3	0	genome.wustl.edu	37	19	38573204	38573204	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	19	38573204	38573204	G	A	SNP	SIPA1L3	ENST00000222345	human	ensembl	74_37	+1	known	silent	c.999	p.P333	0.359	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L3	HGNC	ENSG00000105738				62	0	0	47	7	12.963
SARS2	0	genome.wustl.edu	37	19	39412044	39412044	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	19	39412044	39412044	C	T	SNP	SARS2	ENST00000600042	human	ensembl	74_37	-1	known	missense	c.583	p.G195R	1.000	pirsf_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	pirsf_Ser-tRNA-ligase_type_1,pfam_aa-tRNA-synt_IIb_cons-dom,superfamily_tRNA-bd_arm,prints_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,tigrfam_Ser-tRNA-ligase_type_1	-	no_errors	SARS2	HGNC	ENSG00000104835				35	0	0	37	8	17.7778
ZNF222	0	genome.wustl.edu	37	19	44537105	44537105	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	19	44537105	44537105	A	C	SNP	ZNF222	ENST00000391960	human	ensembl	74_37	+1	known	missense	c.1398	p.K466N	0.272	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF222	HGNC	ENSG00000159885				91	0	0	96	15	13.5135
ZNF229	0	genome.wustl.edu	37	19	44933480	44933480	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	19	44933480	44933480	G	C	SNP	ZNF229	ENST00000588931	human	ensembl	74_37	-1	known	missense	c.1476	p.D492E	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF229	HGNC	ENSG00000167383				183	0	0	124	15	10.7914
ZNF611	0	genome.wustl.edu	37	19	53208636	53208636	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	19	53208636	53208636	T	C	SNP	ZNF611	ENST00000319783	human	ensembl	74_37	-1	known	missense	c.1672	p.R558G	0.928	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF611	HGNC	ENSG00000213020				269	0	0	221	49	18.1481
PEG3	0	genome.wustl.edu	37	19	57329167	57329167	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	19	57329167	57329167	G	A	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	missense	c.809	p.T270M	0.989	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300				28	0	0	11	21	65.625
NCK2	0	genome.wustl.edu	37	2	106497824	106497824	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	106497824	106497824	G	A	SNP	NCK2	ENST00000233154	human	ensembl	74_37	+1	known	silent	c.267	p.A89	0.038	pirsf_Cytoplasmic_NCK	pfam_SH3_domain,pfam_SH3_2,pfam_SH2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pirsf_Cytoplasmic_NCK,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	NCK2	HGNC	ENSG00000071051				64	0	0	28	72	72
ST6GAL2	0	genome.wustl.edu	37	2	107460276	107460276	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	107460276	107460276	G	A	SNP	ST6GAL2	ENST00000361686	human	ensembl	74_37	-1	known	missense	c.158	p.P53L	1.000	NULL	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	-	no_errors	ST6GAL2	HGNC	ENSG00000144057				38	0	0	74	7	8.64198
NBAS	0	genome.wustl.edu	37	2	15607529	15607529	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	15607529	15607529	A	G	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	missense	c.2021	p.L674S	1.000	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779				62	0	0	39	8	17.0213
TTN	0	genome.wustl.edu	37	2	179408680	179408680	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	179408680	179408680	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.88487	p.T29496S	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				141	0	0	55	39	41.4894
ENSG00000231689	0	genome.wustl.edu	37	2	189092669	189092669	+	RNA	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	189092669	189092669	T	C	SNP	ENSG00000231689	ENST00000415357	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC068718.1	Clone_based_vega_gene	ENSG00000231689				81	0	0	14	31	68.8889
GDF7	0	genome.wustl.edu	37	2	20870856	20870856	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	20870856	20870856	G	A	SNP	GDF7	ENST00000272224	human	ensembl	74_37	+1	known	missense	c.1024	p.G342R	1.000	NULL	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF7	HGNC	ENSG00000143869				15	0	0	10	4	28.5714
SMARCAL1	0	genome.wustl.edu	37	2	217285091	217285091	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	217285091	217285091	C	A	SNP	SMARCAL1	ENST00000357276	human	ensembl	74_37	+1	known	nonsense	c.932	p.S311*	0.000	NULL	pfam_HARP_dom,pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAL1	HGNC	ENSG00000138375				45	0	0	25	17	40.4762
TRIP12	0	genome.wustl.edu	37	2	230725133	230725133	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	230725133	230725133	G	T	SNP	TRIP12	ENST00000543084	human	ensembl	74_37	-1	known	missense	c.213	p.H71Q	1.000	NULL	NULL	-	no_errors	TRIP12	HGNC	ENSG00000153827				148	0	0	30	53	63.8554
COL6A3	0	genome.wustl.edu	37	2	238303696	238303696	+	Silent	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	238303696	238303696	G	C	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	silent	c.243	p.V81	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				93	0	0	49	11	18.3333
GPR35	0	genome.wustl.edu	37	2	241569692	241569692	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	241569692	241569692	C	T	SNP	GPR35	ENST00000438013	human	ensembl	74_37	+1	known	missense	c.416	p.T139M	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR35	HGNC	ENSG00000178623				41	0	0	34	3	8.10811
DNAJC5G	0	genome.wustl.edu	37	2	27500827	27500827	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	27500827	27500827	C	T	SNP	DNAJC5G	ENST00000296097	human	ensembl	74_37	+1	known	missense	c.319	p.H107Y	1.000	prints_DnaJ_domain	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC5G	HGNC	ENSG00000163793				102	0	0	62	26	29.5455
ACTR1B	0	genome.wustl.edu	37	2	98275089	98275089	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	98275089	98275089	G	A	SNP	ACTR1B	ENST00000289228	human	ensembl	74_37	-1	known	missense	c.458	p.T153M	1.000	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTR1B	HGNC	ENSG00000115073				117	0	0	118	28	19.1781
INSM1	0	genome.wustl.edu	37	20	20349829	20349829	+	Silent	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	20	20349829	20349829	C	T	SNP	INSM1	ENST00000310227	human	ensembl	74_37	+1	known	silent	c.918	p.C306	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	INSM1	HGNC	ENSG00000173404				9	0	0	14	5	26.3158
RAE1	0	genome.wustl.edu	37	20	55949845	55949845	+	Silent	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	20	55949845	55949845	C	T	SNP	RAE1	ENST00000371242	human	ensembl	74_37	+1	known	silent	c.1008	p.Y336	0.927	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RAE1	HGNC	ENSG00000101146				70	0	0	67	6	8.21918
DSCAM	0	genome.wustl.edu	37	21	42080394	42080394	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	21	42080394	42080394	A	G	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	missense	c.347	p.V116A	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587				122	0	0	107	6	5.30973
ARVCF	0	genome.wustl.edu	37	22	19967629	19967629	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	22	19967629	19967629	A	T	SNP	ARVCF	ENST00000263207	human	ensembl	74_37	-1	known	missense	c.1033	p.S345T	0.999	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARVCF	HGNC	ENSG00000099889				11	0	0	7	7	50
INPP5J	0	genome.wustl.edu	37	22	31520866	31520866	+	Silent	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	22	31520866	31520866	C	T	SNP	INPP5J	ENST00000331075	human	ensembl	74_37	+1	known	silent	c.141	p.N47	0.000	NULL	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	-	no_errors	INPP5J	HGNC	ENSG00000185133				53	0	0	33	2	5.71429
KCNJ4	0	genome.wustl.edu	37	22	38823654	38823654	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	22	38823654	38823654	C	T	SNP	KCNJ4	ENST00000303592	human	ensembl	74_37	-1	known	missense	c.484	p.V162I	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.3	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.3	-	no_errors	KCNJ4	HGNC	ENSG00000168135				84	0	0	24	18	42.8571
TRMT10C	0	genome.wustl.edu	37	3	101283802	101283802	+	Silent	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	3	101283802	101283802	A	G	SNP	TRMT10C	ENST00000309922	human	ensembl	74_37	+1	known	silent	c.177	p.E59	0.963	NULL	pfam_tRNA_m1G_MeTrfase	-	no_errors	TRMT10C	HGNC	ENSG00000174173				169	0	0	186	17	8.37438
PARP14	0	genome.wustl.edu	37	3	122419782	122419782	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	3	122419782	122419782	C	T	SNP	PARP14	ENST00000474629	human	ensembl	74_37	+1	known	missense	c.2381	p.S794F	0.000	pfscan_Macro_dom	pfam_Macro_dom,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_WWE-dom,smart_Macro_dom,pfscan_Macro_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP14	HGNC	ENSG00000173193				86	0	0	94	6	6
DGKG	0	genome.wustl.edu	37	3	185997678	185997678	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	3	185997678	185997678	T	C	SNP	DGKG	ENST00000265022	human	ensembl	74_37	-1	known	missense	c.754	p.T252A	1.000	smart_EF_hand_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKG	HGNC	ENSG00000058866				140	0	0	112	27	19.4245
RRP9	0	genome.wustl.edu	37	3	51969657	51969657	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	3	51969657	51969657	G	A	SNP	RRP9	ENST00000232888	human	ensembl	74_37	-1	known	missense	c.787	p.R263C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RRP9	HGNC	ENSG00000114767				72	0	0	39	4	9.30233
DNAH1	0	genome.wustl.edu	37	3	52426963	52426963	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	3	52426963	52426963	G	A	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	missense	c.10396	p.V3466M	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841				234	0	0	102	14	12.069
NDST3	0	genome.wustl.edu	37	4	118975431	118975431	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	4	118975431	118975431	C	G	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	missense	c.366	p.D122E	0.997	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100				51	0	0	34	5	12.8205
TNIP3	0	genome.wustl.edu	37	4	122071373	122071373	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	4	122071373	122071373	G	A	SNP	TNIP3	ENST00000057513	human	ensembl	74_37	-1	known	missense	c.494	p.A165V	0.997	NULL	NULL	-	no_errors	TNIP3	HGNC	ENSG00000050730				57	0	0	12	14	53.8462
FAM198B	0	genome.wustl.edu	37	4	159076867	159076867	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	4	159076867	159076867	G	T	SNP	FAM198B	ENST00000393807	human	ensembl	74_37	-1	known	missense	c.1045	p.Q349K	1.000	NULL	NULL	-	no_errors	FAM198B	HGNC	ENSG00000164125				92	0	0	17	7	29.1667
VEGFC	0	genome.wustl.edu	37	4	177713378	177713378	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	4	177713378	177713378	C	T	SNP	VEGFC	ENST00000280193	human	ensembl	74_37	-1	known	missense	c.88	p.A30T	1.000	NULL	pfam_PDGF/VEGF_dom,pfam_CXCXC_repeat,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	VEGFC	HGNC	ENSG00000150630				39	0	0	6	11	64.7059
DUX4L4	0	genome.wustl.edu	37	4	191003218	191003218	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	4	191003218	191003218	C	T	SNP	DUX4L4	ENST00000538692	human	ensembl	74_37	+1	known	missense	c.1129	p.P377S	0.024	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_HTH_motif,pfscan_Homeobox_dom	-	no_errors	DUX4L4	HGNC	ENSG00000258834				16	0	0	12	4	25
DUX4L4	0	genome.wustl.edu	37	4	191003238	191003238	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	4	191003238	191003238	G	A	SNP	DUX4L4	ENST00000538692	human	ensembl	74_37	+1	known	silent	c.1149	p.A383	0.009	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_HTH_motif,pfscan_Homeobox_dom	-	no_errors	DUX4L4	HGNC	ENSG00000258834				17	0	0	9	5	35.7143
SLCO4C1	0	genome.wustl.edu	37	5	101572693	101572693	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	5	101572693	101572693	A	C	SNP	SLCO4C1	ENST00000310954	human	ensembl	74_37	-1	known	missense	c.2044	p.F682V	1.000	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO4C1	HGNC	ENSG00000173930				62	0	0	32	14	30.4348
SPOCK1	0	genome.wustl.edu	37	5	136328253	136328253	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	5	136328253	136328253	C	T	SNP	SPOCK1	ENST00000282223	human	ensembl	74_37	-1	known	missense	c.626	p.R209Q	1.000	pfam_SPARC/Testican_Ca-bd-dom	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK1	HGNC	ENSG00000152377				100	0	0	48	19	28.3582
PCDHB11	0	genome.wustl.edu	37	5	140581079	140581079	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	5	140581079	140581079	C	T	SNP	PCDHB11	ENST00000354757	human	ensembl	74_37	+1	known	missense	c.1732	p.R578W	0.017	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479				26	0	0	10	21	67.7419
ADAM19	0	genome.wustl.edu	37	5	156917340	156917340	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	5	156917340	156917340	A	C	SNP	ADAM19	ENST00000394020	human	ensembl	74_37	-1	known	missense	c.2224	p.S742A	0.983	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM19	HGNC	ENSG00000135074				104	0	0	75	8	9.63855
C1QTNF2	0	genome.wustl.edu	37	5	159781800	159781800	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	5	159781800	159781800	G	A	SNP	C1QTNF2	ENST00000393975	human	ensembl	74_37	-1	known	silent	c.354	p.G118	0.937	pfam_Collagen	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF2	HGNC	ENSG00000145861				46	0	0	8	9	52.9412
ERGIC1	0	genome.wustl.edu	37	5	172315710	172315710	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	5	172315710	172315710	T	G	SNP	ERGIC1	ENST00000393784	human	ensembl	74_37	+1	known	missense	c.29	p.I10S	1.000	NULL	pfam_Erv_C	-	no_errors	ERGIC1	HGNC	ENSG00000113719				85	0	0	38	19	33.3333
NSUN2	0	genome.wustl.edu	37	5	6620357	6620357	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	5	6620357	6620357	T	C	SNP	NSUN2	ENST00000264670	human	ensembl	74_37	-1	known	missense	c.677	p.H226R	1.000	pfam_Fmu/NOL1/Nop2p	pfam_Fmu/NOL1/Nop2p,prints_RCMT,prints_RCMT_NCL1	-	no_errors	NSUN2	HGNC	ENSG00000037474				159	0	0	91	27	22.8814
AKAP12	0	genome.wustl.edu	37	6	151672866	151672866	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	6	151672866	151672866	C	A	SNP	AKAP12	ENST00000253332	human	ensembl	74_37	+1	known	missense	c.3340	p.Q1114K	0.000	NULL	pfam_Pkinase-A_anch_WSK-motif,pfam_RII_binding_1	-	no_errors	AKAP12	HGNC	ENSG00000131016				50	0	0	80	40	33.3333
MTRF1L	0	genome.wustl.edu	37	6	153311232	153311232	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	6	153311232	153311232	T	C	SNP	MTRF1L	ENST00000367233	human	ensembl	74_37	-1	known	splice_site	c.943-2	e7-2	0.998	-	-	-	no_errors	MTRF1L	HGNC	ENSG00000112031				75	0	0	69	20	22.4719
ITPR3	0	genome.wustl.edu	37	6	33638124	33638124	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	6	33638124	33638124	C	T	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	missense	c.2212	p.R738C	1.000	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				114	0	0	70	10	12.5
DNAH8	0	genome.wustl.edu	37	6	38950205	38950205	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	6	38950205	38950205	T	G	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.12267	p.I4089M	0.997	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				119	0	0	46	81	63.7795
GLP1R	0	genome.wustl.edu	37	6	39048491	39048491	+	Silent	SNP	A	A	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	6	39048491	39048491	A	C	SNP	GLP1R	ENST00000373256	human	ensembl	74_37	+1	known	silent	c.1200	p.I400	0.993	pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_GLP1_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_GLP1/glucagon_rcpt,prints_GPCR_2_GIP_rcpt	-	no_errors	GLP1R	HGNC	ENSG00000112164				88	0	0	41	4	8.88889
GUCA1A	0	genome.wustl.edu	37	6	42146128	42146128	+	Silent	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	6	42146128	42146128	C	T	SNP	GUCA1A	ENST00000053469	human	ensembl	74_37	+1	known	silent	c.312	p.N104	0.992	pfam_EF_hand_dom,pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	GUCA1A	HGNC	ENSG00000048545				153	0	0	27	64	70.3297
COL19A1	0	genome.wustl.edu	37	6	70866609	70866609	+	Silent	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	6	70866609	70866609	C	T	SNP	COL19A1	ENST00000322773	human	ensembl	74_37	+1	known	silent	c.2286	p.G762	0.874	pfam_Collagen	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL19A1	HGNC	ENSG00000082293				42	0	0	15	3	16.6667
DGKI	0	genome.wustl.edu	37	7	137255996	137255996	+	Silent	SNP	A	A	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	7	137255996	137255996	A	T	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	silent	c.1872	p.G624	0.076	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680				42	0	0	32	3	8.57143
GIMAP6	0	genome.wustl.edu	37	7	150324850	150324850	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	7	150324850	150324850	G	A	SNP	GIMAP6	ENST00000328902	human	ensembl	74_37	-1	known	missense	c.836	p.S279F	0.011	NULL	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP6	HGNC	ENSG00000133561				101	0	0	77	8	9.41176
WBSCR17	0	genome.wustl.edu	37	7	70886089	70886089	+	Silent	SNP	C	C	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	7	70886089	70886089	C	A	SNP	WBSCR17	ENST00000333538	human	ensembl	74_37	+1	known	silent	c.960	p.I320	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	WBSCR17	HGNC	ENSG00000185274				38	0	0	30	3	9.09091
NCF1	0	genome.wustl.edu	37	7	74197927	74197927	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	7	74197927	74197927	C	A	SNP	NCF1	ENST00000289473	human	ensembl	74_37	+1	known	missense	c.634	p.P212T	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_domain,pfam_NADPH_oxidase_p47Phox_C,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain,prints_P47PHOX	-	no_errors	NCF1	HGNC	ENSG00000158517				78	0	0	19	26	57.7778
PCLO	0	genome.wustl.edu	37	7	82387999	82387999	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	7	82387999	82387999	C	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.15321	p.M5107I	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				100	1	0.990099	33	56	62.9213
RP1L1	0	genome.wustl.edu	37	8	10473978	10473978	+	Silent	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	8	10473978	10473978	C	T	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	silent	c.729	p.G243	0.020	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638				113	0	0	15	34	69.3878
PKHD1L1	0	genome.wustl.edu	37	8	110448585	110448585	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	8	110448585	110448585	T	C	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.3524	p.L1175S	0.935	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				65	0	0	71	25	26.0417
TOP1MT	0	genome.wustl.edu	37	8	144399936	144399936	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	8	144399936	144399936	G	A	SNP	TOP1MT	ENST00000329245	human	ensembl	74_37	-1	known	silent	c.1287	p.N429	1.000	pfam_TopoI_cat_euk,superfamily_DNA_brk_join_enz,smart_TopoI_euk,prints_TopoI	pfam_TopoI_DNA-bd_euk,pfam_TopoI_cat_euk,superfamily_TopoI_DNA-bd_euk,superfamily_DNA_brk_join_enz,smart_TopoI_euk,prints_TopoI	-	no_errors	TOP1MT	HGNC	ENSG00000184428				80	0	0	71	10	12.3457
SNORD13	0	genome.wustl.edu	37	8	33371074	33371074	+	RNA	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	8	33371074	33371074	G	C	SNP	SNORD13	ENST00000459299	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD13	HGNC	ENSG00000239039				106	0	0	65	5	7.14286
SNORD13	0	genome.wustl.edu	37	8	33371095	33371095	+	RNA	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	8	33371095	33371095	C	T	SNP	SNORD13	ENST00000459299	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.560	-	-	-	no_errors	SNORD13	HGNC	ENSG00000239039				92	0	0	62	5	7.46269
UBXN2B	0	genome.wustl.edu	37	8	59359985	59359985	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	8	59359985	59359985	C	G	SNP	UBXN2B	ENST00000399598	human	ensembl	74_37	+1	known	missense	c.871	p.P291A	1.000	pfam_UBX,smart_UBX,pfscan_UBX	pfam_SEP_domain,pfam_UBX,superfamily_SEP_domain,smart_SEP_domain,smart_UBX,pfscan_UBX	-	no_errors	UBXN2B	HGNC	ENSG00000215114				102	0	0	147	28	16
PKIA	0	genome.wustl.edu	37	8	79510755	79510755	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	8	79510755	79510755	G	C	SNP	PKIA	ENST00000352966	human	ensembl	74_37	+1	known	missense	c.136	p.D46H	1.000	pfam_cAMP_dep_PKI,pirsf_cAMP_dep_PKI	pfam_cAMP_dep_PKI,pirsf_cAMP_dep_PKI	-	no_errors	PKIA	HGNC	ENSG00000171033				147	0	0	223	13	5.50847
INVS	0	genome.wustl.edu	37	9	102988399	102988399	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	9	102988399	102988399	A	G	SNP	INVS	ENST00000262457	human	ensembl	74_37	+1	known	missense	c.329	p.K110R	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_IQ_motif_EF-hand-BS,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_IQ_motif_EF-hand-BS,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Ankyrin_rpt	-	no_errors	INVS	HGNC	ENSG00000119509				36	0	0	17	12	41.3793
FCN1	0	genome.wustl.edu	37	9	137801728	137801728	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	9	137801728	137801728	G	T	SNP	FCN1	ENST00000371806	human	ensembl	74_37	-1	known	missense	c.897	p.S299R	0.998	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,pfam_Collagen,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FCN1	HGNC	ENSG00000085265				124	0	0	77	43	35.8333
TUBBP5	0	genome.wustl.edu	37	9	141070116	141070116	+	RNA	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	9	141070116	141070116	G	A	SNP	TUBBP5	ENST00000290377	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TUBBP5	HGNC	ENSG00000159247				97	0	0	56	7	11.1111
CNTLN	0	genome.wustl.edu	37	9	17236494	17236494	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	9	17236494	17236494	C	T	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	missense	c.757	p.R253C	0.541	superfamily_Prefoldin	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459				102	0	0	52	42	44.6809
MLLT3	0	genome.wustl.edu	37	9	20414340	20414340	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	9	20414340	20414340	G	A	SNP	MLLT3	ENST00000380338	human	ensembl	74_37	-1	known	silent	c.504	p.S168	1.000	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843				46	0	0	99	6	5.71429
TRPM3	0	genome.wustl.edu	37	9	73442845	73442845	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	9	73442845	73442845	G	A	SNP	TRPM3	ENST00000423814	human	ensembl	74_37	-1	known	silent	c.897	p.N299	0.978	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067				174	0	0	103	33	24.2647
IGSF1	0	genome.wustl.edu	37	X	130409205	130409205	+	Silent	SNP	G	G	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	X	130409205	130409205	G	A	SNP	IGSF1	ENST00000370903	human	ensembl	74_37	-1	known	silent	c.3255	p.G1085	0.951	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGSF1	HGNC	ENSG00000147255				139	1	0.714286	23	104	81.8898
HEPH	0	genome.wustl.edu	37	X	65476078	65476078	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	X	65476078	65476078	G	C	SNP	HEPH	ENST00000519389	human	ensembl	74_37	+1	known	missense	c.2964	p.W988C	1.000	superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPH	HGNC	ENSG00000089472				71	0	0	35	25	41.6667
TAS2R42	0	genome.wustl.edu	37	12	11338798	11338799	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	12	11338798	11338799	-	A	INS	TAS2R42	ENST00000334266	human	ensembl	74_37	-1	known	frame_shift_ins	c.746_745	p.S249fs	0.000:0.015	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	TAS2R42	HGNC	ENSG00000186136				62	0	0	64	26	28.8889
TMEM92	0	genome.wustl.edu	37	17	48356643	48356644	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	17	48356643	48356644	-	GG	INS	TMEM92	ENST00000300433	human	ensembl	74_37	+1	known	frame_shift_ins	c.454_455	p.I154fs	0.001:0.006	NULL	NULL	-	no_errors	TMEM92	HGNC	ENSG00000167105				281	0	0	91	67	42.4051
ANKAR	0	genome.wustl.edu	37	2	190584318	190584326	+	In_Frame_Del	DEL	AATCTATTA	AATCTATTA	-			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	AATCTATTA	AATCTATTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	2	190584318	190584326	AATCTATTA	-	DEL	ANKAR	ENST00000313581	human	ensembl	74_37	+1	known	in_frame_del	c.2245_2253	p.NLL749in_frame_del	0.216:0.119:0.030:0.046:0.076:0.024:0.101:0.902:0.907	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Armadillo,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Armadillo	-	no_errors	ANKAR	HGNC	ENSG00000151687				56	0	0	10	8	44.4444
SMC4	0	genome.wustl.edu	37	3	160143939	160143940	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	3	160143939	160143940	-	A	INS	SMC4	ENST00000344722	human	ensembl	74_37	+1	known	frame_shift_ins	c.2556_2557	p.Q855fs	1.000:0.998	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase,superfamily_Chemotax_Me-accpt_rcpt_lig-bd	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810				234	0	0	193	31	13.8393
ENSG00000232783	0	genome.wustl.edu	37	3	197838274	197838275	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	3	197838274	197838275	AA	-	DEL	ENSG00000232783	ENST00000411596	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	AC073135.3	Clone_based_vega_gene	ENSG00000232783				22	0	0	21	4	16
CARD6	0	genome.wustl.edu	37	5	40853093	40853094	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	5	40853093	40853094	-	T	INS	CARD6	ENST00000254691	human	ensembl	74_37	+1	known	frame_shift_ins	c.1659_1660	p.T556fs	0.959:0.998	NULL	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pfscan_CARD	-	no_errors	CARD6	HGNC	ENSG00000132357				181	0	0	133	58	30.3665
NEUROD6	0	genome.wustl.edu	37	7	31378635	31378635	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GD-01A-11D-A25D-08	TCGA-HU-A4GD-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3980b1e2-d2d8-465d-b17f-840abcfc76f7	bf189546-e18b-4a55-8d8e-200019850a6e	7	31378635	31378635	T	-	DEL	NEUROD6	ENST00000297142	human	ensembl	74_37	-1	known	frame_shift_del	c.248	p.K83fs	1.000	pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD6	HGNC	ENSG00000164600				286	0	0	236	24	9.23077
