Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
BCL2L15	0	genome.wustl.edu	37	1	114429206	114429206	+	Silent	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	114429206	114429206	A	G	SNP	BCL2L15	ENST00000393316	human	ensembl	74_37	-1	known	silent	c.202	p.L68	0.004	NULL	NULL	-	no_errors	BCL2L15	HGNC	ENSG00000188761				40	0	0	48	18	27.2727
PHGDH	0	genome.wustl.edu	37	1	120284422	120284422	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	120284422	120284422	A	C	SNP	PHGDH	ENST00000369409	human	ensembl	74_37	+1	known	missense	c.1111	p.S371R	0.961	tigrfam_D-3-Phosphoglycerate_DH	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,tigrfam_D-3-Phosphoglycerate_DH	-	no_errors	PHGDH	HGNC	ENSG00000092621				68	0	0	62	29	31.8681
ENSG00000203849	0	genome.wustl.edu	37	1	142714007	142714007	+	RNA	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	142714007	142714007	T	C	SNP	ENSG00000203849	ENST00000369381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.142	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849				12	0	0	9	4	30.7692
FLG	0	genome.wustl.edu	37	1	152286041	152286041	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	152286041	152286041	C	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.1321	p.G441R	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				262	0	0	88	194	68.7943
PGLYRP4	0	genome.wustl.edu	37	1	153303244	153303244	+	Nonstop_Mutation	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	153303244	153303244	C	A	SNP	PGLYRP4	ENST00000359650	human	ensembl	74_37	-1	known	nonstop	c.1121	p.*374L	0.965	NULL	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP4	HGNC	ENSG00000163218				45	0	0	79	18	18.5567
FCRL5	0	genome.wustl.edu	37	1	157485420	157485420	+	RNA	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	157485420	157485420	T	C	SNP	FCRL5	ENST00000461387	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FCRL5	HGNC	ENSG00000143297				147	0	0	175	58	24.8927
SPTA1	0	genome.wustl.edu	37	1	158585114	158585114	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	158585114	158585114	A	G	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.6680	p.L2227P	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				158	0	0	180	39	17.8082
SPTA1	0	genome.wustl.edu	37	1	158621218	158621218	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	158621218	158621218	T	C	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.3416	p.K1139R	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				158	0	0	181	53	22.6496
HMCN1	0	genome.wustl.edu	37	1	185892705	185892705	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	185892705	185892705	T	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.1205	p.F402Y	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341				95	0	0	61	34	35.7895
TPR	0	genome.wustl.edu	37	1	186291783	186291783	+	RNA	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	186291783	186291783	T	C	SNP	TPR	ENST00000467810	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TPR	HGNC	ENSG00000047410				28	0	0	10	17	62.963
PLA2G4A	0	genome.wustl.edu	37	1	186948546	186948546	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	186948546	186948546	A	G	SNP	PLA2G4A	ENST00000367466	human	ensembl	74_37	+1	known	missense	c.2060	p.N687S	1.000	superfamily_Acyl_Trfase/lysoPLipase,pfscan_LysoPLipase_cat_dom	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4A	HGNC	ENSG00000116711				56	0	0	58	44	43.1373
CR1L	0	genome.wustl.edu	37	1	207857241	207857241	+	Silent	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	207857241	207857241	T	C	SNP	CR1L	ENST00000508064	human	ensembl	74_37	+1	known	silent	c.402	p.S134	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1L	HGNC	ENSG00000197721				64	0	0	75	4	5.06329
OBSCN	0	genome.wustl.edu	37	1	228461923	228461923	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	228461923	228461923	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.5461	p.E1821K	0.151	smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				69	0	0	14	58	80.5556
HIST3H2A	0	genome.wustl.edu	37	1	228645509	228645509	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	228645509	228645509	G	A	SNP	HIST3H2A	ENST00000366695	human	ensembl	74_37	-1	known	missense	c.10	p.R4C	0.018	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST3H2A	HGNC	ENSG00000181218				27	0	0	32	7	17.9487
LYST	0	genome.wustl.edu	37	1	235918947	235918947	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	235918947	235918947	G	C	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	missense	c.7060	p.L2354V	1.000	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669				105	0	0	101	33	24.6269
FMN2	0	genome.wustl.edu	37	1	240370555	240370555	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	240370555	240370555	T	C	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.2443	p.S815P	0.562	smart_FH2_Formin	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				54	0	0	54	19	26.0274
FMN2	0	genome.wustl.edu	37	1	240371459	240371459	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	240371459	240371459	C	T	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.3347	p.A1116V	0.004	pfam_Formin_homology_1,smart_FH2_Formin	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				26	0	0	24	7	22.5806
DAB1	0	genome.wustl.edu	37	1	57602299	57602299	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	57602299	57602299	C	T	SNP	DAB1	ENST00000371231	human	ensembl	74_37	-1	known	missense	c.223	p.A75T	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	DAB1	HGNC	ENSG00000173406				26	0	0	44	11	20
ARHGAP29	0	genome.wustl.edu	37	1	94643169	94643169	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	94643169	94643169	A	C	SNP	ARHGAP29	ENST00000260526	human	ensembl	74_37	-1	known	missense	c.2904	p.S968R	0.007	NULL	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	ARHGAP29	HGNC	ENSG00000137962				34	0	0	57	5	8.06452
ALG14	0	genome.wustl.edu	37	1	95538430	95538430	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	1	95538430	95538430	C	T	SNP	ALG14	ENST00000370205	human	ensembl	74_37	-1	known	missense	c.25	p.A9T	0.023	NULL	pfam_Oligosacch_biosynth_Alg14	-	no_errors	ALG14	HGNC	ENSG00000172339				64	0	0	105	13	11.0169
SMC3	0	genome.wustl.edu	37	10	112352843	112352843	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	10	112352843	112352843	A	G	SNP	SMC3	ENST00000361804	human	ensembl	74_37	+1	known	missense	c.1825	p.M609V	1.000	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	-	no_errors	SMC3	HGNC	ENSG00000108055				36	0	0	17	27	61.3636
KIAA1462	0	genome.wustl.edu	37	10	30336525	30336525	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	10	30336525	30336525	G	A	SNP	KIAA1462	ENST00000375377	human	ensembl	74_37	-1	known	missense	c.217	p.R73C	0.001	NULL	NULL	-	no_errors	KIAA1462	HGNC	ENSG00000165757				58	0	0	46	18	28.125
ZNF488	0	genome.wustl.edu	37	10	48371038	48371038	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	10	48371038	48371038	G	T	SNP	ZNF488	ENST00000395702	human	ensembl	74_37	+1	known	missense	c.506	p.R169L	0.559	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF488	HGNC	ENSG00000165388				58	0	0	33	14	29.7872
PCDH15	0	genome.wustl.edu	37	10	55587203	55587203	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	10	55587203	55587203	C	T	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	silent	c.4317	p.P1439	0.377	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				83	0	0	66	36	35.2941
CDH23	0	genome.wustl.edu	37	10	73544160	73544160	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	10	73544160	73544160	C	T	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.5500	p.P1834S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				38	0	0	40	3	6.97674
LRIT1	0	genome.wustl.edu	37	10	85991924	85991924	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	10	85991924	85991924	G	A	SNP	LRIT1	ENST00000372105	human	ensembl	74_37	-1	known	missense	c.1631	p.T544M	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRIT1	HGNC	ENSG00000148602				37	0	0	29	12	29.2683
FLI1	0	genome.wustl.edu	37	11	128638116	128638116	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	128638116	128638116	C	T	SNP	FLI1	ENST00000527786	human	ensembl	74_37	+1	known	missense	c.334	p.P112S	1.000	superfamily_SAM/pointed	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	FLI1	HGNC	ENSG00000151702				41	0	0	21	10	32.2581
IGSF9B	0	genome.wustl.edu	37	11	133802003	133802003	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	133802003	133802003	T	A	SNP	IGSF9B	ENST00000321016	human	ensembl	74_37	-1	known	missense	c.1073	p.K358M	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9B	HGNC	ENSG00000080854				14	0	0	19	8	29.6296
SLC5A12	0	genome.wustl.edu	37	11	26725134	26725134	+	Silent	SNP	G	G	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	26725134	26725134	G	T	SNP	SLC5A12	ENST00000396005	human	ensembl	74_37	-1	known	silent	c.765	p.V255	0.161	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A12	HGNC	ENSG00000148942				98	0	0	88	35	28.4553
ABTB2	0	genome.wustl.edu	37	11	34182568	34182568	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	34182568	34182568	C	T	SNP	ABTB2	ENST00000435224	human	ensembl	74_37	-1	known	missense	c.2279	p.R760Q	1.000	NULL	pfam_BTB_POZ,pfam_Ankyrin_rpt,superfamily_Histone-fold,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like	-	no_errors	ABTB2	HGNC	ENSG00000166016				18	0	0	18	9	33.3333
OR52E6	0	genome.wustl.edu	37	11	5862525	5862525	+	Silent	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	5862525	5862525	A	G	SNP	OR52E6	ENST00000379946	human	ensembl	74_37	-1	known	silent	c.615	p.G205	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52E6	HGNC	ENSG00000205409				70	0	0	62	8	11.4286
MS4A14	0	genome.wustl.edu	37	11	60183179	60183179	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	60183179	60183179	A	C	SNP	MS4A14	ENST00000300187	human	ensembl	74_37	+1	known	missense	c.738	p.E246D	0.043	NULL	pfam_CD20-like	-	no_errors	MS4A14	HGNC	ENSG00000166928				79	0	0	67	25	27.1739
SART1	0	genome.wustl.edu	37	11	65732651	65732651	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	65732651	65732651	G	A	SNP	SART1	ENST00000312397	human	ensembl	74_37	+1	known	silent	c.516	p.A172	0.148	pfam_SART_1	pfam_SART_1	-	no_errors	SART1	HGNC	ENSG00000175467				31	0	0	34	4	10.5263
TPP1	0	genome.wustl.edu	37	11	6638271	6638271	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	6638271	6638271	G	A	SNP	TPP1	ENST00000299427	human	ensembl	74_37	-1	known	nonsense	c.622	p.R208*	0.988	superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S53_propep,pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,superfamily_Prot_inh_propept,smart_Peptidase_S53_propep	-	no_errors	TPP1	HGNC	ENSG00000166340				42	0	0	23	14	37.8378
SUV420H1	0	genome.wustl.edu	37	11	67938540	67938540	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	67938540	67938540	A	C	SNP	SUV420H1	ENST00000304363	human	ensembl	74_37	-1	known	missense	c.919	p.Y307D	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SUV420H1	HGNC	ENSG00000110066				57	0	0	43	23	34.8485
FAT3	0	genome.wustl.edu	37	11	92087432	92087432	+	Silent	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	11	92087432	92087432	T	C	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.2154	p.I718	0.305	superfamily_Cadherin-like	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				156	0	0	105	46	30.4636
CLIP1	0	genome.wustl.edu	37	12	122801401	122801401	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	122801401	122801401	A	C	SNP	CLIP1	ENST00000540338	human	ensembl	74_37	-1	known	missense	c.3368	p.L1123W	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Znf_CCHC,superfamily_Prefoldin,pfscan_CAP-Gly_domain	-	no_errors	CLIP1	HGNC	ENSG00000130779				19	0	0	20	10	33.3333
SLC6A13	0	genome.wustl.edu	37	12	330193	330193	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	330193	330193	C	T	SNP	SLC6A13	ENST00000343164	human	ensembl	74_37	-1	known	missense	c.1730	p.R577Q	0.009	prints_Na/ntran_symport_GABA_GAT2	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT2	-	no_errors	SLC6A13	HGNC	ENSG00000010379				23	0	0	32	13	28.8889
LRRK2	0	genome.wustl.edu	37	12	40671948	40671948	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	40671948	40671948	A	C	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.2126	p.K709T	0.987	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906				97	0	0	110	24	17.9104
ADAMTS20	0	genome.wustl.edu	37	12	43826503	43826503	+	Silent	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	43826503	43826503	A	G	SNP	ADAMTS20	ENST00000389420	human	ensembl	74_37	-1	known	silent	c.2832	p.V944	0.955	smart_Thrombospondin_1_rpt	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157				77	0	0	84	14	14.2857
ACVR1B	0	genome.wustl.edu	37	12	52379014	52379014	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	52379014	52379014	A	C	SNP	ACVR1B	ENST00000257963	human	ensembl	74_37	+1	known	missense	c.1018	p.N340H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ACVR1B	HGNC	ENSG00000135503				57	0	0	36	3	7.69231
KRT8	0	genome.wustl.edu	37	12	53295827	53295827	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	53295827	53295827	C	T	SNP	KRT8	ENST00000293308	human	ensembl	74_37	-1	known	missense	c.354	p.M118I	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT8	HGNC	ENSG00000170421				42	0	0	28	2	6.66667
NEUROD4	0	genome.wustl.edu	37	12	55421113	55421113	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	55421113	55421113	C	A	SNP	NEUROD4	ENST00000242994	human	ensembl	74_37	+1	known	missense	c.890	p.P297H	0.773	pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD4	HGNC	ENSG00000123307				453	0	0	375	153	28.9773
DNAJC14	0	genome.wustl.edu	37	12	56221845	56221845	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	56221845	56221845	G	A	SNP	DNAJC14	ENST00000317269	human	ensembl	74_37	-1	known	missense	c.598	p.R200C	0.956	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC14	HGNC	ENSG00000135392				60	0	0	55	23	29.4872
ANO2	0	genome.wustl.edu	37	12	5708660	5708660	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	5708660	5708660	G	T	SNP	ANO2	ENST00000356134	human	ensembl	74_37	-1	known	nonsense	c.2226	p.Y742*	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO2	HGNC	ENSG00000047617				109	0	0	125	83	39.9038
LTBR	0	genome.wustl.edu	37	12	6499832	6499832	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	6499832	6499832	A	G	SNP	LTBR	ENST00000228918	human	ensembl	74_37	+1	known	missense	c.1037	p.N346S	0.999	pirsf_TNFR_3_LTBR,prints_TNFR_3_LTBR	pirsf_TNFR_3_LTBR,pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,prints_TNFR_3_LTBR,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LTBR	HGNC	ENSG00000111321				119	0	0	152	35	18.7166
C12orf50	0	genome.wustl.edu	37	12	88376963	88376963	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	88376963	88376963	G	A	SNP	C12orf50	ENST00000298699	human	ensembl	74_37	-1	known	missense	c.1136	p.T379M	0.482	NULL	NULL	-	no_errors	C12orf50	HGNC	ENSG00000165805				68	0	0	45	25	35.7143
TEX29	0	genome.wustl.edu	37	13	111980581	111980581	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	13	111980581	111980581	G	A	SNP	TEX29	ENST00000283547	human	ensembl	74_37	+1	known	missense	c.110	p.R37Q	0.030	NULL	NULL	-	no_errors	TEX29	HGNC	ENSG00000153495				50	0	0	43	11	20.3704
TMCO3	0	genome.wustl.edu	37	13	114157822	114157822	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	13	114157822	114157822	A	C	SNP	TMCO3	ENST00000434316	human	ensembl	74_37	+1	known	missense	c.957	p.Q319H	0.999	pfam_Cation/H_exchanger	pfam_Cation/H_exchanger	-	no_errors	TMCO3	HGNC	ENSG00000150403				91	0	0	61	4	6.15385
AKAP11	0	genome.wustl.edu	37	13	42876004	42876004	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	13	42876004	42876004	A	T	SNP	AKAP11	ENST00000025301	human	ensembl	74_37	+1	known	missense	c.3122	p.K1041M	0.959	NULL	NULL	-	no_errors	AKAP11	HGNC	ENSG00000023516				132	0	0	109	14	11.3821
APOPT1	0	genome.wustl.edu	37	14	104056650	104056650	+	RNA	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	14	104056650	104056650	C	T	SNP	APOPT1	ENST00000473127	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	APOPT1	HGNC	ENSG00000256053				64	0	0	50	27	35.0649
MYH6	0	genome.wustl.edu	37	14	23873529	23873529	+	Silent	SNP	G	G	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	14	23873529	23873529	G	T	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	silent	c.711	p.V237	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616				129	0	0	81	32	28.3186
ABHD12B	0	genome.wustl.edu	37	14	51347206	51347206	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	14	51347206	51347206	G	A	SNP	ABHD12B	ENST00000337334	human	ensembl	74_37	+1	known	silent	c.372	p.K124	0.141	NULL	pfam_AB_hydrolase_1,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	ABHD12B	HGNC	ENSG00000131969				109	0	0	112	11	8.94309
UNC79	0	genome.wustl.edu	37	14	94008914	94008914	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	14	94008914	94008914	G	A	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	missense	c.1627	p.D543N	1.000	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				81	0	0	30	63	67.7419
AK7	0	genome.wustl.edu	37	14	96887177	96887177	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	14	96887177	96887177	T	C	SNP	AK7	ENST00000267584	human	ensembl	74_37	+1	known	missense	c.517	p.F173L	0.949	NULL	pfam_Dpy-30_motif,pfam_Adenylate_kin,superfamily_P-loop_NTPase	-	no_errors	AK7	HGNC	ENSG00000140057				44	0	0	33	15	31.25
SPTBN5	0	genome.wustl.edu	37	15	42168400	42168400	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	15	42168400	42168400	C	T	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.4034	p.R1345H	0.022	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877				36	0	0	26	4	13.3333
LDHAL6B	0	genome.wustl.edu	37	15	59499721	59499721	+	Silent	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	15	59499721	59499721	T	C	SNP	LDHAL6B	ENST00000307144	human	ensembl	74_37	+1	known	silent	c.582	p.Y194	1.000	pfam_Lactate/malate_DH_N,pirsf_L-lactate/malate_DH,prints_L-lactate/malate_DH,tigrfam_L-lactate_DH	pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,prints_L-lactate/malate_DH,tigrfam_L-lactate_DH	-	no_errors	LDHAL6B	HGNC	ENSG00000171989				160	0	0	63	135	68.1818
SKOR1	0	genome.wustl.edu	37	15	68118849	68118849	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	15	68118849	68118849	G	A	SNP	SKOR1	ENST00000380035	human	ensembl	74_37	+1	known	missense	c.683	p.R228Q	1.000	pfam_c-SKI_SMAD4-bd_dom,superfamily_SAND_dom-like	pfam_Transform_Ski,pfam_c-SKI_SMAD4-bd_dom,superfamily_DNA-bd_dom_put,superfamily_SAND_dom-like	-	no_errors	SKOR1	HGNC	ENSG00000188779				41	0	0	59	16	21.3333
ANP32A	0	genome.wustl.edu	37	15	69080237	69080237	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	15	69080237	69080237	T	G	SNP	ANP32A	ENST00000465139	human	ensembl	74_37	-1	known	missense	c.76	p.N26H	1.000	NULL	pfam_Leu-rich_rpt,smart_U2A'_phosphoprotein32A_C	-	no_errors	ANP32A	HGNC	ENSG00000140350				137	0	0	155	35	18.4211
MMP2	0	genome.wustl.edu	37	16	55522479	55522479	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	16	55522479	55522479	C	A	SNP	MMP2	ENST00000219070	human	ensembl	74_37	+1	known	missense	c.857	p.A286D	0.358	pfam_Pept_M10_metallopeptidase,superfamily_Kringle-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP2	HGNC	ENSG00000087245				23	0	0	14	4	22.2222
CNGB1	0	genome.wustl.edu	37	16	57954299	57954299	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	16	57954299	57954299	G	C	SNP	CNGB1	ENST00000251102	human	ensembl	74_37	-1	known	missense	c.1793	p.P598R	0.999	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB1	HGNC	ENSG00000070729				63	0	0	46	4	8
CLEC18A	0	genome.wustl.edu	37	16	69988260	69988260	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	16	69988260	69988260	G	A	SNP	CLEC18A	ENST00000449317	human	ensembl	74_37	+1	known	silent	c.240	p.Q80	0.028	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	pfam_CAP_domain,pfam_C-type_lectin,superfamily_CAP_domain,superfamily_C-type_lectin_fold,smart_Allrgn_V5/Tpx1,smart_EG-like_dom,smart_C-type_lectin,pfscan_EG-like_dom,pfscan_C-type_lectin,prints_Allrgn_V5/Tpx1	-	no_errors	CLEC18A	HGNC	ENSG00000157322				24	0	0	10	4	28.5714
MYH4	0	genome.wustl.edu	37	17	10369962	10369962	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	17	10369962	10369962	G	A	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.101	p.A34V	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424				134	0	0	118	7	5.6
DNAH9	0	genome.wustl.edu	37	17	11713633	11713633	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	17	11713633	11713633	C	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.8654	p.A2885D	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				79	0	0	58	21	26.5823
GPR179	0	genome.wustl.edu	37	17	36499599	36499599	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	17	36499599	36499599	G	T	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	missense	c.74	p.A25D	0.997	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888				38	0	0	51	10	16.3934
ARL4D	0	genome.wustl.edu	37	17	41477310	41477310	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	17	41477310	41477310	C	T	SNP	ARL4D	ENST00000320033	human	ensembl	74_37	+1	known	silent	c.210	p.I70	1.000	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_MIRO-like,pfam_SRP_receptor_beta_su,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_MIRO-like,pfam_SRP_receptor_beta_su,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL4D	HGNC	ENSG00000175906				66	0	0	47	17	26.5625
LUC7L3	0	genome.wustl.edu	37	17	48819054	48819054	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	17	48819054	48819054	C	G	SNP	LUC7L3	ENST00000240304	human	ensembl	74_37	+1	known	missense	c.388	p.Q130E	1.000	pfam_Luc7-rel	pfam_Luc7-rel	-	no_errors	LUC7L3	HGNC	ENSG00000108848				42	0	0	47	4	7.84314
ACE	0	genome.wustl.edu	37	17	61557756	61557756	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	17	61557756	61557756	C	T	SNP	ACE	ENST00000290866	human	ensembl	74_37	+1	known	silent	c.714	p.D238	0.987	pfam_Peptidase_M2	pfam_Peptidase_M2,prints_Peptidase_M2	-	no_errors	ACE	HGNC	ENSG00000159640				59	0	0	49	19	27.9412
TP53	0	genome.wustl.edu	37	17	7578542	7578542	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	17	7578542	7578542	G	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.388	p.L130V	0.985	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				30	0	0	10	21	67.7419
CEP192	0	genome.wustl.edu	37	18	13059147	13059147	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	18	13059147	13059147	G	A	SNP	CEP192	ENST00000506447	human	ensembl	74_37	+1	known	missense	c.4324	p.E1442K	1.000	NULL	NULL	-	no_errors	CEP192	HGNC	ENSG00000101639				140	0	0	106	41	27.8912
DCC	0	genome.wustl.edu	37	18	51053116	51053116	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	18	51053116	51053116	A	T	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	missense	c.4241	p.E1414V	1.000	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323				77	0	0	55	17	23.6111
CDH7	0	genome.wustl.edu	37	18	63511131	63511131	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	18	63511131	63511131	G	A	SNP	CDH7	ENST00000323011	human	ensembl	74_37	+1	known	silent	c.1065	p.L355	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC	ENSG00000081138				88	0	0	49	40	44.9438
ICAM4	0	genome.wustl.edu	37	19	10398776	10398776	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	10398776	10398776	C	T	SNP	ICAM4	ENST00000380770	human	ensembl	74_37	+1	known	missense	c.812	p.A271V	0.000	NULL	pfam_ICAM_N,prints_ICAM_VCAM_N	-	no_errors	ICAM4	HGNC	ENSG00000105371				34	0	0	35	12	25.5319
MEX3D	0	genome.wustl.edu	37	19	1556548	1556548	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	1556548	1556548	G	A	SNP	MEX3D	ENST00000388824	human	ensembl	74_37	-1	known	missense	c.970	p.P324S	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3D	HGNC	ENSG00000181588				23	0	0	22	3	12
SUGP2	0	genome.wustl.edu	37	19	19129942	19129942	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	19129942	19129942	A	C	SNP	SUGP2	ENST00000337018	human	ensembl	74_37	-1	known	missense	c.1826	p.L609R	0.001	superfamily_Surp,smart_Surp	pfam_Surp,pfam_G_patch_dom,superfamily_Surp,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	SUGP2	HGNC	ENSG00000064607				43	0	0	38	3	7.31707
PPAP2C	0	genome.wustl.edu	37	19	282196	282196	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	282196	282196	T	C	SNP	PPAP2C	ENST00000327790	human	ensembl	74_37	-1	known	missense	c.718	p.K240E	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2C	HGNC	ENSG00000141934				34	0	0	32	4	11.1111
PPAP2C	0	genome.wustl.edu	37	19	282201	282201	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	282201	282201	T	G	SNP	PPAP2C	ENST00000327790	human	ensembl	74_37	-1	known	missense	c.713	p.D238A	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2C	HGNC	ENSG00000141934				33	0	0	31	7	18.4211
DMKN	0	genome.wustl.edu	37	19	36002331	36002331	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	36002331	36002331	G	A	SNP	DMKN	ENST00000339686	human	ensembl	74_37	-1	known	silent	c.900	p.S300	0.000	NULL	NULL	-	no_errors	DMKN	HGNC	ENSG00000161249				30	0	0	17	7	29.1667
ZNF569	0	genome.wustl.edu	37	19	37935838	37935838	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	37935838	37935838	G	A	SNP	ZNF569	ENST00000589833	human	ensembl	74_37	-1	putative	nonsense	c.58	p.Q20*	0.812	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF569	HGNC	ENSG00000196437				64	0	0	36	21	36.8421
CAPN12	0	genome.wustl.edu	37	19	39233065	39233065	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	39233065	39233065	G	A	SNP	CAPN12	ENST00000328867	human	ensembl	74_37	-1	known	silent	c.411	p.G137	0.377	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN12	HGNC	ENSG00000182472				32	0	0	23	17	42.5
MYBPC2	0	genome.wustl.edu	37	19	50961956	50961956	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	50961956	50961956	G	A	SNP	MYBPC2	ENST00000357701	human	ensembl	74_37	+1	known	silent	c.2451	p.A817	0.884	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC2	HGNC	ENSG00000086967				40	0	0	28	3	9.67742
CLEC11A	0	genome.wustl.edu	37	19	51227348	51227348	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	51227348	51227348	C	T	SNP	CLEC11A	ENST00000250340	human	ensembl	74_37	+1	known	silent	c.334	p.L112	0.063	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC11A	HGNC	ENSG00000105472				38	0	0	23	13	36.1111
PPP2R1A	0	genome.wustl.edu	37	19	52715979	52715979	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	52715979	52715979	C	T	SNP	PPP2R1A	ENST00000322088	human	ensembl	74_37	+1	known	missense	c.544	p.R182W	1.000	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1A	HGNC	ENSG00000105568				73	0	0	47	17	26.5625
ZNF835	0	genome.wustl.edu	37	19	57175484	57175484	+	Silent	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	57175484	57175484	A	G	SNP	ZNF835	ENST00000537055	human	ensembl	74_37	-1	known	silent	c.1083	p.P361	0.154	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF835	HGNC	ENSG00000127903				22	0	0	19	4	17.3913
USP29	0	genome.wustl.edu	37	19	57641483	57641483	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	57641483	57641483	A	C	SNP	USP29	ENST00000254181	human	ensembl	74_37	+1	known	missense	c.1440	p.E480D	0.990	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP29	HGNC	ENSG00000131864				126	0	0	80	46	36.5079
RGPD4	0	genome.wustl.edu	37	2	108479240	108479240	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	108479240	108479240	C	T	SNP	RGPD4	ENST00000354986	human	ensembl	74_37	+1	known	nonsense	c.2308	p.R770*	0.592	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862				163	1	0.609756	111	53	32.3171
LCT	0	genome.wustl.edu	37	2	136562354	136562354	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	136562354	136562354	C	T	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	missense	c.4447	p.A1483T	1.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850				37	0	0	22	13	37.1429
RND3	0	genome.wustl.edu	37	2	151331486	151331486	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	151331486	151331486	T	C	SNP	RND3	ENST00000263895	human	ensembl	74_37	-1	known	missense	c.251	p.Y84C	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RND3	HGNC	ENSG00000115963				34	0	0	19	8	29.6296
CHRNA1	0	genome.wustl.edu	37	2	175619140	175619140	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	175619140	175619140	G	A	SNP	CHRNA1	ENST00000261007	human	ensembl	74_37	-1	known	missense	c.422	p.A141V	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNA1	HGNC	ENSG00000138435				35	0	0	24	17	41.4634
ITGAV	0	genome.wustl.edu	37	2	187503013	187503013	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	187503013	187503013	C	A	SNP	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	nonsense	c.812	p.S271*	1.000	pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448				20	0	0	15	7	31.8182
DNAH7	0	genome.wustl.edu	37	2	196877623	196877623	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	196877623	196877623	G	A	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.877	p.R293C	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997				35	0	0	40	10	20
SPEG	0	genome.wustl.edu	37	2	220312985	220312985	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	220312985	220312985	G	A	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	missense	c.1105	p.A369T	0.000	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195				28	0	0	19	12	38.7097
SPHKAP	0	genome.wustl.edu	37	2	229046307	229046307	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	229046307	229046307	C	T	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.8	p.G3D	0.999	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820				98	0	0	123	19	13.3803
PASK	0	genome.wustl.edu	37	2	242076420	242076420	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	242076420	242076420	T	G	SNP	PASK	ENST00000358649	human	ensembl	74_37	-1	known	missense	c.1136	p.K379T	1.000	superfamily_PAS,smart_PAS	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PAS_fold,superfamily_Kinase-like_dom,superfamily_PAS,smart_PAS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_PAS,pfscan_Prot_kinase_dom,tigrfam_PAS	-	no_errors	PASK	HGNC	ENSG00000115687				46	0	0	39	4	9.30233
SLC30A3	0	genome.wustl.edu	37	2	27480102	27480102	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	27480102	27480102	G	A	SNP	SLC30A3	ENST00000233535	human	ensembl	74_37	-1	known	missense	c.697	p.R233W	1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A3	HGNC	ENSG00000115194				46	0	0	22	29	56.8627
NRXN1	0	genome.wustl.edu	37	2	50280600	50280600	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	50280600	50280600	C	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.3913	p.E1305K	1.000	pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				79	0	0	78	18	18.75
VPS54	0	genome.wustl.edu	37	2	64148443	64148443	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	64148443	64148443	T	A	SNP	VPS54	ENST00000272322	human	ensembl	74_37	-1	known	missense	c.1766	p.D589V	1.000	NULL	pfam_Vps54,pfam_Vacuolar_sorting-assoc_54	-	no_errors	VPS54	HGNC	ENSG00000143952				56	0	0	68	4	5.55556
VPS54	0	genome.wustl.edu	37	2	64189220	64189220	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	64189220	64189220	G	A	SNP	VPS54	ENST00000272322	human	ensembl	74_37	-1	known	nonsense	c.982	p.Q328*	1.000	pfam_Vacuolar_sorting-assoc_54	pfam_Vps54,pfam_Vacuolar_sorting-assoc_54	-	no_errors	VPS54	HGNC	ENSG00000143952				137	0	0	203	12	5.5814
AAK1	0	genome.wustl.edu	37	2	69709919	69709919	+	Silent	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	69709919	69709919	A	G	SNP	AAK1	ENST00000409085	human	ensembl	74_37	-1	known	silent	c.2391	p.S797	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AAK1	HGNC	ENSG00000115977				21	0	0	28	3	9.67742
WBP1	0	genome.wustl.edu	37	2	74686657	74686657	+	RNA	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	74686657	74686657	C	T	SNP	WBP1	ENST00000464774	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	WBP1	HGNC	ENSG00000239779				24	0	0	18	5	21.7391
REG1B	0	genome.wustl.edu	37	2	79312349	79312349	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	79312349	79312349	T	G	SNP	REG1B	ENST00000305089	human	ensembl	74_37	-1	known	missense	c.494	p.K165T	0.001	superfamily_C-type_lectin_fold	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG1B	HGNC	ENSG00000172023				41	0	0	37	12	24.4898
TEKT4	0	genome.wustl.edu	37	2	95542476	95542476	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	95542476	95542476	C	T	SNP	TEKT4	ENST00000295201	human	ensembl	74_37	+1	known	missense	c.1270	p.R424C	0.689	pfam_Tektin	pfam_Tektin,prints_Tektin	-	no_errors	TEKT4	HGNC	ENSG00000163060				22	0	0	21	4	16
ZNF2	0	genome.wustl.edu	37	2	95847411	95847411	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	95847411	95847411	C	T	SNP	ZNF2	ENST00000340539	human	ensembl	74_37	+1	known	missense	c.838	p.H280Y	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF2	HGNC	ENSG00000163067				85	0	0	46	35	43.2099
SGK2	0	genome.wustl.edu	37	20	42204996	42204996	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	20	42204996	42204996	C	T	SNP	SGK2	ENST00000341458	human	ensembl	74_37	+1	known	missense	c.1006	p.R336W	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	SGK2	HGNC	ENSG00000101049				45	0	0	101	17	14.4068
TOX2	0	genome.wustl.edu	37	20	42574587	42574587	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	20	42574587	42574587	C	T	SNP	TOX2	ENST00000358131	human	ensembl	74_37	+1	known	missense	c.35	p.A12V	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TOX2	HGNC	ENSG00000124191				48	0	0	88	9	9.27835
KCNB1	0	genome.wustl.edu	37	20	47991257	47991257	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	20	47991257	47991257	G	A	SNP	KCNB1	ENST00000371741	human	ensembl	74_37	-1	known	silent	c.840	p.T280	0.052	pfam_Ion_trans_dom	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.1,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB1	HGNC	ENSG00000158445				72	0	0	80	15	15.7895
SETD4	0	genome.wustl.edu	37	21	37418071	37418071	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	21	37418071	37418071	A	G	SNP	SETD4	ENST00000332131	human	ensembl	74_37	-1	known	missense	c.535	p.S179P	1.000	pfam_SET_dom,pirsf_Lys_MTase_YDR198C_prd	pfam_Rubisco_LSMT_subst-bd,pfam_SET_dom,pirsf_Lys_MTase_YDR198C_prd	-	no_errors	SETD4	HGNC	ENSG00000185917				91	0	0	75	38	33.6283
TRPM2	0	genome.wustl.edu	37	21	45789217	45789217	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	21	45789217	45789217	C	T	SNP	TRPM2	ENST00000300482	human	ensembl	74_37	+1	known	silent	c.762	p.I254	0.069	NULL	pfam_Ion_trans_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	TRPM2	HGNC	ENSG00000142185				24	0	0	32	2	5.88235
MED15	0	genome.wustl.edu	37	22	20939222	20939222	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	22	20939222	20939222	C	T	SNP	MED15	ENST00000263205	human	ensembl	74_37	+1	known	silent	c.1884	p.N628	1.000	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917				131	0	0	85	37	30.3279
CCDC116	0	genome.wustl.edu	37	22	21991026	21991026	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	22	21991026	21991026	G	A	SNP	CCDC116	ENST00000292779	human	ensembl	74_37	+1	known	silent	c.1509	p.E503	0.337	NULL	NULL	-	no_errors	CCDC116	HGNC	ENSG00000161180				62	0	0	66	6	8.33333
BCR	0	genome.wustl.edu	37	22	23603674	23603674	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	22	23603674	23603674	C	T	SNP	BCR	ENST00000305877	human	ensembl	74_37	+1	known	missense	c.1699	p.R567C	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_RhoGAP_dom,pfam_Bcr-Abl_oncoprot_oligo,pfam_DH-domain,pfam_C2_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_Bcr-Abl_oncoprot_oligo,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	BCR	HGNC	ENSG00000186716				78	0	0	47	18	27.6923
BAIAP2L2	0	genome.wustl.edu	37	22	38494145	38494145	+	Silent	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	22	38494145	38494145	C	A	SNP	BAIAP2L2	ENST00000381669	human	ensembl	74_37	-1	known	silent	c.390	p.A130	0.008	pfam_IRSp53/MIM_homology_IMD	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2L2	HGNC	ENSG00000128298				52	0	0	29	15	34.0909
CACNA1I	0	genome.wustl.edu	37	22	40069984	40069984	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	22	40069984	40069984	G	A	SNP	CACNA1I	ENST00000336649	human	ensembl	74_37	+1	known	silent	c.4818	p.K1606	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC	ENSG00000100346				36	0	0	24	3	11.1111
ARHGEF26	0	genome.wustl.edu	37	3	153840224	153840224	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	3	153840224	153840224	G	T	SNP	ARHGEF26	ENST00000356448	human	ensembl	74_37	+1	known	missense	c.443	p.R148L	0.890	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF26	HGNC	ENSG00000114790				26	0	0	19	7	26.9231
CNTN4	0	genome.wustl.edu	37	3	2861218	2861218	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	3	2861218	2861218	G	A	SNP	CNTN4	ENST00000397461	human	ensembl	74_37	+1	known	missense	c.407	p.R136Q	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN4	HGNC	ENSG00000144619				44	0	0	43	19	30.6452
SCN5A	0	genome.wustl.edu	37	3	38648264	38648264	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	3	38648264	38648264	C	T	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.1036	p.E346K	0.006	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				65	0	0	21	23	52.2727
CELSR3	0	genome.wustl.edu	37	3	48697258	48697258	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	3	48697258	48697258	C	T	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.2810	p.G937D	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				112	0	0	52	17	24.6377
MST1R	0	genome.wustl.edu	37	3	49936308	49936308	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	3	49936308	49936308	C	G	SNP	MST1R	ENST00000296474	human	ensembl	74_37	-1	known	missense	c.1540	p.G514R	1.000	pirsf_Tyr_kinase_HGF/MSP_rcpt,superfamily_Semap_dom,pfscan_Semap_dom	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MST1R	HGNC	ENSG00000164078				94	0	0	72	6	7.69231
PRKCD	0	genome.wustl.edu	37	3	53220186	53220186	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	3	53220186	53220186	C	T	SNP	PRKCD	ENST00000330452	human	ensembl	74_37	+1	known	silent	c.1090	p.L364	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Prot_kin_PKC_delta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	PRKCD	HGNC	ENSG00000163932				29	0	0	11	7	38.8889
FRMD4B	0	genome.wustl.edu	37	3	69236960	69236960	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	3	69236960	69236960	G	A	SNP	FRMD4B	ENST00000398540	human	ensembl	74_37	-1	known	missense	c.1880	p.S627L	0.996	NULL	pfam_DUF3338,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	-	no_errors	FRMD4B	HGNC	ENSG00000114541				25	0	0	17	9	34.6154
SMAD1	0	genome.wustl.edu	37	4	146460992	146460992	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	4	146460992	146460992	A	G	SNP	SMAD1	ENST00000302085	human	ensembl	74_37	+1	known	missense	c.437	p.Y146C	1.000	NULL	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD1	HGNC	ENSG00000170365				54	0	0	39	18	31.5789
VEGFC	0	genome.wustl.edu	37	4	177632778	177632778	+	Silent	SNP	A	A	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	4	177632778	177632778	A	T	SNP	VEGFC	ENST00000280193	human	ensembl	74_37	-1	known	silent	c.579	p.S193	0.969	pfam_PDGF/VEGF_dom,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	pfam_PDGF/VEGF_dom,pfam_CXCXC_repeat,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	VEGFC	HGNC	ENSG00000150630				101	0	0	87	30	25.641
CTNND2	0	genome.wustl.edu	37	5	11411765	11411765	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	11411765	11411765	C	T	SNP	CTNND2	ENST00000304623	human	ensembl	74_37	-1	known	splice_site	c.323-1	e5-1	1.000	-	-	-	no_errors	CTNND2	HGNC	ENSG00000169862				39	0	0	91	12	11.6505
PCDHA9	0	genome.wustl.edu	37	5	140229141	140229141	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	140229141	140229141	C	T	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	missense	c.1061	p.T354M	0.025	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961				79	0	0	54	18	25
PCDHA10	0	genome.wustl.edu	37	5	140237415	140237415	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	140237415	140237415	C	T	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	silent	c.1782	p.R594	0.126	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120				40	0	0	61	14	18.6667
PCDHB6	0	genome.wustl.edu	37	5	140532152	140532152	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	140532152	140532152	T	G	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.2314	p.F772V	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				89	0	0	69	32	31.6832
SPINK5	0	genome.wustl.edu	37	5	147491381	147491381	+	Silent	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	147491381	147491381	T	C	SNP	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	silent	c.1743	p.C581	0.998	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710				67	0	0	49	23	31.9444
FGF18	0	genome.wustl.edu	37	5	170863108	170863108	+	Silent	SNP	C	C	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	170863108	170863108	C	G	SNP	FGF18	ENST00000274625	human	ensembl	74_37	+1	known	silent	c.81	p.A27	1.000	superfamily_Cytokine_IL1-like	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF18	HGNC	ENSG00000156427				32	0	0	24	6	20
IRX4	0	genome.wustl.edu	37	5	1879711	1879711	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	1879711	1879711	C	T	SNP	IRX4	ENST00000231357	human	ensembl	74_37	-1	known	missense	c.643	p.A215T	0.994	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX4	HGNC	ENSG00000113430				56	0	0	97	17	14.9123
NIPBL	0	genome.wustl.edu	37	5	37061100	37061100	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	37061100	37061100	A	G	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.7840	p.I2614V	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				44	0	0	74	19	20.4301
HMGCS1	0	genome.wustl.edu	37	5	43298983	43298983	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	43298983	43298983	G	A	SNP	HMGCS1	ENST00000325110	human	ensembl	74_37	-1	known	nonsense	c.85	p.Q29*	1.000	pfam_HMG_CoA_synth_N,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk	pfam_HMG_CoA_synt_C,pfam_HMG_CoA_synth_N,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk	-	no_errors	HMGCS1	HGNC	ENSG00000112972				107	0	0	140	37	20.904
SEMA5A	0	genome.wustl.edu	37	5	9063172	9063172	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	5	9063172	9063172	G	A	SNP	SEMA5A	ENST00000382496	human	ensembl	74_37	-1	known	missense	c.2345	p.T782M	0.997	superfamily_Thrombospondin_1_rpt	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902				27	0	0	26	53	67.0886
NUDT3	0	genome.wustl.edu	37	6	34256668	34256668	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	6	34256668	34256668	T	A	SNP	NUDT3	ENST00000607016	human	ensembl	74_37	-1	known	missense	c.381	p.K127N	0.998	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT3	HGNC	ENSG00000272325				50	0	0	72	17	19.1011
FAM83B	0	genome.wustl.edu	37	6	54805876	54805876	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	6	54805876	54805876	T	A	SNP	FAM83B	ENST00000306858	human	ensembl	74_37	+1	known	missense	c.2107	p.L703M	0.002	NULL	pfam_DUF1669	-	no_errors	FAM83B	HGNC	ENSG00000168143				77	0	0	75	62	45.2555
F13A1	0	genome.wustl.edu	37	6	6266873	6266873	+	Silent	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	6	6266873	6266873	A	G	SNP	F13A1	ENST00000264870	human	ensembl	74_37	-1	known	silent	c.489	p.A163	0.325	pfam_Transglutaminase_N,superfamily_Ig_E-set	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	F13A1	HGNC	ENSG00000124491				102	0	0	108	35	24.4755
KCNQ5	0	genome.wustl.edu	37	6	73830225	73830225	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	6	73830225	73830225	C	A	SNP	KCNQ5	ENST00000402622	human	ensembl	74_37	+1	known	missense	c.1145	p.A382E	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ5	HGNC	ENSG00000185760				24	0	0	25	6	19.3548
KHDC3L	0	genome.wustl.edu	37	6	74072894	74072894	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	6	74072894	74072894	C	T	SNP	KHDC3L	ENST00000370367	human	ensembl	74_37	+1	known	silent	c.246	p.N82	0.000	NULL	NULL	-	no_errors	KHDC3L	HGNC	ENSG00000203908				101	0	0	64	37	36.6337
ZAN	0	genome.wustl.edu	37	7	100349524	100349524	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	100349524	100349524	C	A	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.1796	p.T599N	0.000	NULL	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839				79	0	0	73	15	17.0455
TMEM168	0	genome.wustl.edu	37	7	112407799	112407799	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	112407799	112407799	C	G	SNP	TMEM168	ENST00000312814	human	ensembl	74_37	-1	known	missense	c.1547	p.G516A	1.000	NULL	superfamily_ConA-like_lec_gl_sf	-	no_errors	TMEM168	HGNC	ENSG00000146802				60	0	0	70	4	5.40541
CNOT4	0	genome.wustl.edu	37	7	135095396	135095396	+	Silent	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	135095396	135095396	C	A	SNP	CNOT4	ENST00000541284	human	ensembl	74_37	-1	known	silent	c.690	p.A230	0.997	NULL	pfam_RRM_dom,smart_RRM_dom_euk,pfscan_Znf_RING,pfscan_RRM_dom	-	no_errors	CNOT4	HGNC	ENSG00000080802				51	0	0	87	6	6.45161
TMEM213	0	genome.wustl.edu	37	7	138487711	138487711	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	138487711	138487711	C	T	SNP	TMEM213	ENST00000422794	human	ensembl	74_37	+1	known	missense	c.371	p.A124V	1.000	NULL	NULL	-	no_errors	TMEM213	HGNC	ENSG00000214128				39	0	0	40	3	6.97674
CNTNAP2	0	genome.wustl.edu	37	7	148080940	148080940	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	148080940	148080940	G	A	SNP	CNTNAP2	ENST00000361727	human	ensembl	74_37	+1	known	silent	c.3675	p.S1225	0.994	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP2	HGNC	ENSG00000174469				27	0	0	20	19	48.7179
SSPO	0	genome.wustl.edu	37	7	149524040	149524040	+	RNA	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	149524040	149524040	A	G	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.949	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				124	1	0.8	133	39	22.6744
TAX1BP1	0	genome.wustl.edu	37	7	27839705	27839705	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	27839705	27839705	A	G	SNP	TAX1BP1	ENST00000396319	human	ensembl	74_37	+1	known	missense	c.1760	p.Y587C	1.000	NULL	pfam_CoCoA	-	no_errors	TAX1BP1	HGNC	ENSG00000106052				41	0	0	46	7	13.2075
GCK	0	genome.wustl.edu	37	7	44193050	44193050	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	44193050	44193050	G	A	SNP	GCK	ENST00000345378	human	ensembl	74_37	-1	known	silent	c.61	p.L21	1.000	pfam_Hexokinase_N	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	GCK	HGNC	ENSG00000106633				133	0	0	219	14	6.00858
AP5Z1	0	genome.wustl.edu	37	7	4830888	4830888	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	4830888	4830888	T	C	SNP	AP5Z1	ENST00000348624	human	ensembl	74_37	+1	known	missense	c.2296	p.F766L	1.000	NULL	NULL	-	no_errors	AP5Z1	HGNC	ENSG00000242802				33	0	0	31	4	11.4286
GRM3	0	genome.wustl.edu	37	7	86415918	86415918	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	86415918	86415918	C	T	SNP	GRM3	ENST00000361669	human	ensembl	74_37	+1	known	silent	c.810	p.R270	0.043	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM3	HGNC	ENSG00000198822				53	0	0	64	18	21.9512
ADAM22	0	genome.wustl.edu	37	7	87808288	87808288	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	87808288	87808288	A	T	SNP	ADAM22	ENST00000265727	human	ensembl	74_37	+1	known	missense	c.2339	p.D780V	1.000	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM22	HGNC	ENSG00000008277				44	0	0	41	13	24.0741
CYP3A4	0	genome.wustl.edu	37	7	99359762	99359762	+	Silent	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	99359762	99359762	C	T	SNP	CYP3A4	ENST00000336411	human	ensembl	74_37	-1	known	silent	c.1155	p.G385	0.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_CYP3A,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP3A4	HGNC	ENSG00000160868				93	0	0	106	29	21.4815
TAF6	0	genome.wustl.edu	37	7	99710533	99710533	+	Silent	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	7	99710533	99710533	T	C	SNP	TAF6	ENST00000344095	human	ensembl	74_37	-1	known	silent	c.462	p.K154	1.000	NULL	pfam_DUF1546,pfam_TAF_TATA-bd,superfamily_Histone-fold,superfamily_ARM-type_fold,smart_TAF_TATA-bd	-	no_errors	TAF6	HGNC	ENSG00000106290				195	0	0	189	77	28.9474
SPAG1	0	genome.wustl.edu	37	8	101203630	101203630	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	101203630	101203630	G	A	SNP	SPAG1	ENST00000251809	human	ensembl	74_37	+1	known	missense	c.845	p.R282H	1.000	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SPAG1	HGNC	ENSG00000104450				51	0	0	53	13	19.697
KCNV1	0	genome.wustl.edu	37	8	110980822	110980822	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	110980822	110980822	C	T	SNP	KCNV1	ENST00000297404	human	ensembl	74_37	-1	known	missense	c.998	p.R333H	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv8,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv4	-	no_errors	KCNV1	HGNC	ENSG00000164794				40	0	0	47	12	20.339
EPPK1	0	genome.wustl.edu	37	8	144941359	144941359	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	144941359	144941359	G	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.6063	p.H2021Q	0.769	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				32	0	0	42	16	27.5862
MSR1	0	genome.wustl.edu	37	8	16012654	16012654	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	16012654	16012654	C	A	SNP	MSR1	ENST00000262101	human	ensembl	74_37	-1	known	splice_site	c.818-1	e5-1	1.000	-	-	-	no_errors	MSR1	HGNC	ENSG00000038945				22	0	0	24	11	31.4286
CSMD1	0	genome.wustl.edu	37	8	2830805	2830805	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	2830805	2830805	G	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.8760	p.F2920L	0.463	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				155	0	0	153	24	13.5593
PPP2CB	0	genome.wustl.edu	37	8	30648824	30648824	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	30648824	30648824	T	C	SNP	PPP2CB	ENST00000221138	human	ensembl	74_37	-1	known	missense	c.746	p.N249S	1.000	smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP2CB	HGNC	ENSG00000104695				57	0	0	56	19	25.3333
ANK1	0	genome.wustl.edu	37	8	41552776	41552776	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	41552776	41552776	C	T	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.3034	p.E1012K	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534				121	1	0.819672	89	39	30.4688
POLB	0	genome.wustl.edu	37	8	42206594	42206594	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	42206594	42206594	C	T	SNP	POLB	ENST00000265421	human	ensembl	74_37	+1	known	missense	c.247	p.R83C	1.000	superfamily_DNA_pol_b-like_N,smart_DNA-dir_DNA_pol_X	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,smart_DNA-dir_DNA_pol_X,smart_Hlx-hairpin-Hlx_DNA-bd_motif,prints_DNA_pol_X_beta-like,prints_DNA_pol_X	-	no_errors	POLB	HGNC	ENSG00000070501				75	0	0	35	14	28.5714
SOX17	0	genome.wustl.edu	37	8	55370848	55370848	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	55370848	55370848	G	A	SNP	SOX17	ENST00000297316	human	ensembl	74_37	+1	known	silent	c.150	p.A50	0.991	superfamily_HMG_box_dom	pfam_Sox_C_TAD,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX17	HGNC	ENSG00000164736				14	0	0	19	6	24
ARFGEF1	0	genome.wustl.edu	37	8	68140335	68140335	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	68140335	68140335	T	C	SNP	ARFGEF1	ENST00000262215	human	ensembl	74_37	-1	known	missense	c.3454	p.M1152V	1.000	superfamily_ARM-type_fold	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF1	HGNC	ENSG00000066777				79	0	0	79	34	30.0885
ARFGEF1	0	genome.wustl.edu	37	8	68213553	68213553	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	8	68213553	68213553	T	C	SNP	ARFGEF1	ENST00000262215	human	ensembl	74_37	-1	known	missense	c.218	p.N73S	1.000	NULL	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF1	HGNC	ENSG00000066777				85	0	0	85	36	29.7521
CCDC180	0	genome.wustl.edu	37	9	100126341	100126341	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	9	100126341	100126341	C	T	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	missense	c.4043	p.P1348L	0.123	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816				63	0	0	32	13	28.8889
OBP2A	0	genome.wustl.edu	37	9	138438674	138438674	+	Silent	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	9	138438674	138438674	G	A	SNP	OBP2A	ENST00000340780	human	ensembl	74_37	+1	known	silent	c.123	p.P41	0.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_von_Ebner_gland	-	no_errors	OBP2A	HGNC	ENSG00000122136				19	0	0	28	7	20
CACNA1B	0	genome.wustl.edu	37	9	140846795	140846795	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	9	140846795	140846795	T	G	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.1036	p.F346V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				41	0	0	54	18	25
KANK1	0	genome.wustl.edu	37	9	742406	742406	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	9	742406	742406	G	A	SNP	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	splice_site	c.3897+1	e9+1	1.000	-	-	-	no_errors	KANK1	HGNC	ENSG00000107104				33	0	0	15	12	44.4444
NTRK2	0	genome.wustl.edu	37	9	87635235	87635235	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	9	87635235	87635235	T	G	SNP	NTRK2	ENST00000277120	human	ensembl	74_37	+1	known	missense	c.2287	p.F763V	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_LRR-contain_N,superfamily_Kinase-like_dom,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_NGF_rcpt,prints_Tyr_kin_neurotrophic_rcpt_2	-	no_errors	NTRK2	HGNC	ENSG00000148053				104	0	0	75	35	31.8182
SMARCA1	0	genome.wustl.edu	37	X	128599895	128599895	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	X	128599895	128599895	T	G	SNP	SMARCA1	ENST00000371122	human	ensembl	74_37	-1	known	missense	c.2743	p.I915L	1.000	pfam_SLIDE,superfamily_Homeodomain-like	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038				46	0	0	57	37	39.3617
SAGE1	0	genome.wustl.edu	37	X	134983830	134983830	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	X	134983830	134983830	C	T	SNP	SAGE1	ENST00000324447	human	ensembl	74_37	+1	known	missense	c.200	p.S67L	0.000	NULL	NULL	-	no_errors	SAGE1	HGNC	ENSG00000181433				100	0	0	115	80	41.0256
PCYT1B	0	genome.wustl.edu	37	X	24625971	24625971	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	X	24625971	24625971	C	A	SNP	PCYT1B	ENST00000379144	human	ensembl	74_37	-1	known	missense	c.225	p.R75S	0.989	NULL	pfam_Cyt_trans-like,tigrfam_Cyt_trans-like	-	no_errors	PCYT1B	HGNC	ENSG00000102230				9	0	0	14	3	17.6471
MAGEB10	0	genome.wustl.edu	37	X	27840119	27840119	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	X	27840119	27840119	A	C	SNP	MAGEB10	ENST00000356790	human	ensembl	74_37	+1	known	missense	c.696	p.L232F	0.000	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB10	HGNC	ENSG00000177689				28	0	0	24	14	36.8421
MXRA5	0	genome.wustl.edu	37	X	3239183	3239183	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	X	3239183	3239183	T	A	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	missense	c.4543	p.S1515C	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825				52	0	0	91	11	10.7843
ZNF41	0	genome.wustl.edu	37	X	47306848	47306848	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	X	47306848	47306848	C	T	SNP	ZNF41	ENST00000397050	human	ensembl	74_37	-1	known	missense	c.2351	p.R784H	0.579	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF41	HGNC	ENSG00000147124				44	0	0	46	36	43.9024
FAAH2	0	genome.wustl.edu	37	X	57313396	57313396	+	Silent	SNP	A	A	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	X	57313396	57313396	A	G	SNP	FAAH2	ENST00000374900	human	ensembl	74_37	+1	known	silent	c.138	p.E46	0.057	superfamily_Amidase_dom	pfam_Amidase,superfamily_Amidase_dom	-	no_errors	FAAH2	HGNC	ENSG00000165591				11	0	0	14	2	12.5
ACRC	0	genome.wustl.edu	37	X	70823751	70823751	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	X	70823751	70823751	C	G	SNP	ACRC	ENST00000373695	human	ensembl	74_37	+1	known	missense	c.624	p.N208K	0.547	NULL	pfam_SprT-like_domain,smart_SprT-like_domain	-	no_errors	ACRC	HGNC	ENSG00000147174				177	0	0	158	92	36.8
NRG3	0	genome.wustl.edu	37	10	84718771	84718810	+	Frame_Shift_Del	DEL	AGCATCCAGCACAATGGCAAAGTCAGAGAACTTGGTGAAG	AGCATCCAGCACAATGGCAAAGTCAGAGAACTTGGTGAAG	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	AGCATCCAGCACAATGGCAAAGTCAGAGAACTTGGTGAAG	AGCATCCAGCACAATGGCAAAGTCAGAGAACTTGGTGAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	10	84718771	84718810	AGCATCCAGCACAATGGCAAAGTCAGAGAACTTGGTGAAG	-	DEL	NRG3	ENST00000404547	human	ensembl	74_37	+1	known	frame_shift_del	c.1224_1263	p.S410fs	1.000:1.000:0.995:0.992:0.998:1.000:1.000:1.000:1.000:1.000:0.991:0.990:0.946:0.972:0.981:0.966:0.867:0.841:0.804:0.948:0.948:0.916:0.897:0.895:0.779:0.832:0.817:0.151:0.127:0.056:0.051:0.000:0.001:0.001:0.001:0.006:0.227:0.798:0.981:0.984	NULL	pfscan_EG-like_dom	-	no_errors	NRG3	HGNC	ENSG00000185737				47	0	0	15	7	31.8182
HIP1R	0	genome.wustl.edu	37	12	123345886	123345887	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	123345886	123345887	-	G	INS	HIP1R	ENST00000253083	human	ensembl	74_37	+1	known	frame_shift_ins	c.2984_2985	p.A996fs	1.000:1.000	pfam_ILWEQ_dom,smart_ILWEQ_dom,pfscan_ILWEQ_dom	pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom	-	no_errors	HIP1R	HGNC	ENSG00000130787				56	0	0	18	12	40
TBK1	0	genome.wustl.edu	37	12	64891001	64891003	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	12	64891001	64891003	GAA	-	DEL	TBK1	ENST00000331710	human	ensembl	74_37	+1	known	in_frame_del	c.1921_1923	p.E643in_frame_del	1.000:1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TBK1	HGNC	ENSG00000183735				90	0	0	75	14	15.7303
ENSG00000258027	0	genome.wustl.edu	37	14	20086381	20086382	+	Splice_Site	INS	-	-	T			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	14	20086381	20086382	-	T	INS	ENSG00000258027	ENST00000548217	human	ensembl	74_37	+1	known	splice_site_ins	c.NULL	NULL	1.000:1.000	-	-	-	no_errors	RP11-597A11.1	Clone_based_vega_gene	ENSG00000258027				27	0	0	10	5	33.3333
ZNF609	0	genome.wustl.edu	37	15	64967246	64967247	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	15	64967246	64967247	-	A	INS	ZNF609	ENST00000326648	human	ensembl	74_37	+1	known	frame_shift_ins	c.2193_2194	p.K734fs	1.000:1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357				138	0	0	169	63	27.1552
SLC24A1	0	genome.wustl.edu	37	15	65918177	65918179	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	15	65918177	65918179	CTG	-	DEL	SLC24A1	ENST00000261892	human	ensembl	74_37	+1	known	in_frame_del	c.1759_1761	p.L590in_frame_del	1.000:1.000:1.000	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A1	HGNC	ENSG00000074621				78	0	0	88	11	11.1111
NAGPA	0	genome.wustl.edu	37	16	5083678	5083679	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	16	5083678	5083679	GC	-	DEL	NAGPA	ENST00000312251	human	ensembl	74_37	-1	known	frame_shift_del	c.138_137	p.R46fs	0.004:0.541	NULL	pfam_DUF2233,pfscan_EG-like_dom	-	no_errors	NAGPA	HGNC	ENSG00000103174				10	0	0	6	2	25
KRT19	0	genome.wustl.edu	37	17	39684320	39684320	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	17	39684320	39684320	G	-	DEL	KRT19	ENST00000361566	human	ensembl	74_37	-1	known	frame_shift_del	c.180	p.Y61fs	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT19	HGNC	ENSG00000171345				40	0	0	206	46	18.254
SBK2	0	genome.wustl.edu	37	19	56041169	56041169	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	19	56041169	56041169	C	-	DEL	SBK2	ENST00000344158	human	ensembl	74_37	-1	known	frame_shift_del	c.978	p.R327fs	0.118	smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SBK2	HGNC	ENSG00000187550				27	0	0	18	6	25
CALCRL	0	genome.wustl.edu	37	2	188250275	188250275	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	188250275	188250275	A	-	DEL	CALCRL	ENST00000392370	human	ensembl	74_37	-1	known	frame_shift_del	c.48	p.F16fs	0.049	prints_GPCR_2_CGRP1_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GCPR_2_calcitonin_rcpt_fam,prints_GPCR_2_CGRP1_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_calcitonin_rcpt	-	no_errors	CALCRL	HGNC	ENSG00000064989				35	0	0	26	8	23.5294
PREPL	0	genome.wustl.edu	37	2	44549026	44549026	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	2	44549026	44549026	A	-	DEL	PREPL	ENST00000260648	human	ensembl	74_37	-1	known	frame_shift_del	c.2034	p.N679fs	0.999	pfam_Peptidase_S9	pfam_Peptidase_S9,pfam_Pept_S9A_N,prints_Peptidase_S9A	-	no_errors	PREPL	HGNC	ENSG00000138078				60	0	0	69	17	19.7674
ERGIC3	0	genome.wustl.edu	37	20	34144843	34144844	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	20	34144843	34144844	CT	-	DEL	ERGIC3	ENST00000447986	human	ensembl	74_37	+1	known	frame_shift_del	c.1024_1025	p.S343fs	1.000:1.000	pfam_Erv_C	pfam_Erv_C	-	no_errors	ERGIC3	HGNC	ENSG00000125991				49	0	0	107	13	10.8333
CRTAP	0	genome.wustl.edu	37	3	33161979	33161980	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	3	33161979	33161980	AT	-	DEL	CRTAP	ENST00000320954	human	ensembl	74_37	+1	known	frame_shift_del	c.615_616	p.Y206fs	0.000:0.986	NULL	NULL	-	no_errors	CRTAP	HGNC	ENSG00000170275				15	0	0	15	14	48.2759
FAT4	0	genome.wustl.edu	37	4	126412322	126412324	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	4	126412322	126412324	CTC	-	DEL	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	in_frame_del	c.14345_14347	p.P4784in_frame_del	0.695:0.640:1.000	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				67	0	0	46	20	30.303
TFB1M	0	genome.wustl.edu	37	6	155632370	155632373	+	Frame_Shift_Del	DEL	AGCG	AGCG	-			TCGA-HU-A4GF-01A-11D-A24D-08	TCGA-HU-A4GF-10A-01D-A24F-08	AGCG	AGCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b9641542-98dd-4827-b747-e66bdb1e4213	94ba2829-6f3a-49b5-99c0-c25b4d40b39a	6	155632370	155632373	AGCG	-	DEL	TFB1M	ENST00000367166	human	ensembl	74_37	-1	known	frame_shift_del	c.237_234	p.A79fs	0.991:1.000:1.000:0.948	pfam_rRNA_Ade_methylase_transferase,smart_rRNA_Ade_methylase_Trfase_N	pfam_rRNA_Ade_methylase_transferase,smart_rRNA_Ade_methylase_Trfase_N	-	no_errors	TFB1M	HGNC	ENSG00000029639				80	0	0	56	16	22.2222
