Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
KIF1B	0	genome.wustl.edu	37	1	10386200	10386200	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	10386200	10386200	C	T	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	missense	c.2569	p.R857C	1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				265	1	0.37594	200	45	18.3673
PGD	0	genome.wustl.edu	37	1	10479510	10479510	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	10479510	10479510	G	A	SNP	PGD	ENST00000270776	human	ensembl	74_37	+1	known	missense	c.1246	p.A416T	0.001	pfam_6PGDH_C,superfamily_6-PGluconate_DH_C-like,tigrfam_6PGDH_decarbox	pfam_6PGDH_C,pfam_6PGDH_NADP-bd,superfamily_6-PGluconate_DH_C-like,tigrfam_6PGDH_decarbox	-	no_errors	PGD	HGNC	ENSG00000142657				140	0	0	115	26	18.4397
FNDC7	0	genome.wustl.edu	37	1	109270660	109270660	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	109270660	109270660	T	C	SNP	FNDC7	ENST00000271311	human	ensembl	74_37	+1	known	missense	c.1345	p.S449P	0.675	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC7	HGNC	ENSG00000143107				204	0	0	186	11	5.58376
CELSR2	0	genome.wustl.edu	37	1	109794458	109794458	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	109794458	109794458	G	A	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	missense	c.1757	p.G586D	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126				106	0	0	60	5	7.69231
GNAT2	0	genome.wustl.edu	37	1	110155418	110155418	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	110155418	110155418	C	A	SNP	GNAT2	ENST00000351050	human	ensembl	74_37	-1	known	missense	c.75	p.E25D	1.000	pfam_Gprotein_alpha_su,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAT2	HGNC	ENSG00000134183				131	0	0	97	23	19.1667
EPS8L3	0	genome.wustl.edu	37	1	110293322	110293322	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	110293322	110293322	C	T	SNP	EPS8L3	ENST00000369805	human	ensembl	74_37	-1	known	missense	c.1733	p.R578Q	0.001	superfamily_SAM/pointed	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L3	HGNC	ENSG00000198758				75	0	0	45	13	22.4138
EPS8L3	0	genome.wustl.edu	37	1	110300972	110300972	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	110300972	110300972	C	T	SNP	EPS8L3	ENST00000369805	human	ensembl	74_37	-1	known	missense	c.686	p.R229Q	0.000	NULL	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L3	HGNC	ENSG00000198758				341	0	0	241	35	12.6812
KCNC4	0	genome.wustl.edu	37	1	110765712	110765712	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	110765712	110765712	G	A	SNP	KCNC4	ENST00000369787	human	ensembl	74_37	+1	known	missense	c.805	p.V269M	0.957	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_K_chnl_volt-dep_Kv3_ID,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.4,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC4	HGNC	ENSG00000116396				215	0	0	171	17	9.04255
LAMTOR5	0	genome.wustl.edu	37	1	110946654	110946654	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	110946654	110946654	G	A	SNP	LAMTOR5	ENST00000256644	human	ensembl	74_37	-1	known	silent	c.348	p.R116	1.000	NULL	NULL	-	no_errors	LAMTOR5	HGNC	ENSG00000134248				110	0	0	90	11	10.8911
KCNA3	0	genome.wustl.edu	37	1	111216557	111216557	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	111216557	111216557	G	C	SNP	KCNA3	ENST00000369769	human	ensembl	74_37	-1	known	missense	c.875	p.S292C	1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.3,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA3	HGNC	ENSG00000177272				134	0	0	121	8	6.20155
TTLL10	0	genome.wustl.edu	37	1	1120454	1120454	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	1120454	1120454	G	A	SNP	TTLL10	ENST00000379289	human	ensembl	74_37	+1	known	missense	c.1366	p.G456S	1.000	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL10	HGNC	ENSG00000162571				47	0	0	36	14	28
ST7L	0	genome.wustl.edu	37	1	113093294	113093294	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	113093294	113093294	G	A	SNP	ST7L	ENST00000358039	human	ensembl	74_37	-1	known	missense	c.1418	p.P473L	1.000	pfam_ST7	pfam_ST7	-	no_errors	ST7L	HGNC	ENSG00000007341				79	0	0	61	5	7.57576
UBIAD1	0	genome.wustl.edu	37	1	11333902	11333902	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	11333902	11333902	A	G	SNP	UBIAD1	ENST00000376810	human	ensembl	74_37	+1	known	missense	c.314	p.Y105C	1.000	pfam_UbiA_prenyltransferase	pfam_UbiA_prenyltransferase	-	no_errors	UBIAD1	HGNC	ENSG00000120942				181	0	0	125	25	16.6667
PHTF1	0	genome.wustl.edu	37	1	114254420	114254420	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	114254420	114254420	C	T	SNP	PHTF1	ENST00000369604	human	ensembl	74_37	-1	known	missense	c.995	p.R332Q	0.999	NULL	pfam_TF_homeodomain_male	-	no_errors	PHTF1	HGNC	ENSG00000116793				60	0	0	53	5	8.62069
AP4B1	0	genome.wustl.edu	37	1	114437750	114437750	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	114437750	114437750	C	T	SNP	AP4B1	ENST00000256658	human	ensembl	74_37	-1	known	silent	c.2157	p.T719	0.000	pfam_B-adaptin_app_sub_C,superfamily_Coatomer/calthrin_app_sub_C,pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP4B1	HGNC	ENSG00000134262				46	0	0	29	2	6.45161
TRIM33	0	genome.wustl.edu	37	1	114947917	114947917	+	RNA	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	114947917	114947917	C	A	SNP	TRIM33	ENST00000476908	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TRIM33	HGNC	ENSG00000197323				24	0	0	6	6	50
AMPD1	0	genome.wustl.edu	37	1	115229524	115229524	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	115229524	115229524	G	A	SNP	AMPD1	ENST00000520113	human	ensembl	74_37	-1	known	missense	c.322	p.R108C	0.966	pirsf_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD1	HGNC	ENSG00000116748				94	0	0	57	13	18.5714
SDF4	0	genome.wustl.edu	37	1	1152973	1152973	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	1152973	1152973	G	A	SNP	SDF4	ENST00000360001	human	ensembl	74_37	-1	known	silent	c.1008	p.P336	0.952	smart_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	SDF4	HGNC	ENSG00000078808				105	0	0	60	14	18.9189
IGSF3	0	genome.wustl.edu	37	1	117150810	117150810	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	117150810	117150810	C	T	SNP	IGSF3	ENST00000318837	human	ensembl	74_37	-1	known	missense	c.976	p.A326T	1.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF3	HGNC	ENSG00000143061				37	0	0	25	7	21.875
DRAXIN	0	genome.wustl.edu	37	1	11779718	11779718	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	11779718	11779718	G	A	SNP	DRAXIN	ENST00000294485	human	ensembl	74_37	+1	known	missense	c.1015	p.A339T	0.952	NULL	NULL	-	no_errors	DRAXIN	HGNC	ENSG00000162490				51	0	0	37	3	7.5
GDAP2	0	genome.wustl.edu	37	1	118439374	118439374	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	118439374	118439374	G	A	SNP	GDAP2	ENST00000493555	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GDAP2	HGNC	ENSG00000196505				46	0	0	28	13	31.7073
WARS2	0	genome.wustl.edu	37	1	119575732	119575732	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	119575732	119575732	C	T	SNP	WARS2	ENST00000235521	human	ensembl	74_37	-1	known	silent	c.885	p.A295	0.000	pfam_aa-tRNA-synth_Ic,tigrfam_Trp-tRNA-ligase	pfam_aa-tRNA-synth_Ic,prints_Trp-tRNA-ligase,tigrfam_Trp-tRNA-ligase	-	no_errors	WARS2	HGNC	ENSG00000116874				147	0	0	128	9	6.56934
HIST2H2BA	0	genome.wustl.edu	37	1	120906064	120906064	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	120906064	120906064	G	A	SNP	HIST2H2BA	ENST00000430394	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	HIST2H2BA	HGNC	ENSG00000223345				136	0	0	94	10	9.61538
SCNN1D	0	genome.wustl.edu	37	1	1221519	1221519	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	1221519	1221519	G	A	SNP	SCNN1D	ENST00000379101	human	ensembl	74_37	+1	known	nonsense	c.678	p.W226*	0.610	NULL	NULL	-	no_errors	SCNN1D	HGNC	ENSG00000162572				27	0	0	24	2	7.69231
CPSF3L	0	genome.wustl.edu	37	1	1250257	1250257	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	1250257	1250257	G	A	SNP	CPSF3L	ENST00000540437	human	ensembl	74_37	-1	known	missense	c.667	p.R223W	1.000	smart_Beta-lactamas-like	pfam_Beta_Casp,pfam_Beta-lactamas-like,pfam_RMMBL,smart_Beta-lactamas-like	-	no_errors	CPSF3L	HGNC	ENSG00000127054				91	0	0	67	6	8.21918
PRAMEF12	0	genome.wustl.edu	37	1	12835827	12835827	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	12835827	12835827	G	A	SNP	PRAMEF12	ENST00000357726	human	ensembl	74_37	+1	known	silent	c.429	p.Q143	0.001	NULL	NULL	-	no_errors	PRAMEF12	HGNC	ENSG00000116726				200	0	0	126	10	7.35294
MXRA8	0	genome.wustl.edu	37	1	1290256	1290256	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	1290256	1290256	C	T	SNP	MXRA8	ENST00000445648	human	ensembl	74_37	-1	known	missense	c.755	p.R252H	0.978	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	MXRA8	HGNC	ENSG00000162576				46	0	0	39	3	7.14286
PDPN	0	genome.wustl.edu	37	1	13910346	13910346	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	13910346	13910346	C	T	SNP	PDPN	ENST00000294489	human	ensembl	74_37	+1	known	missense	c.46	p.R16W	0.000	NULL	pfam_Podoplanin	-	no_errors	PDPN	HGNC	ENSG00000162493				98	0	0	53	5	8.62069
PDE4DIP	0	genome.wustl.edu	37	1	144915560	144915560	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	144915560	144915560	C	T	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	missense	c.1865	p.R622Q	0.182	superfamily_ARM-type_fold	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				258	0	0	181	12	6.21762
TARS2	0	genome.wustl.edu	37	1	150463092	150463092	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	150463092	150463092	A	G	SNP	TARS2	ENST00000369064	human	ensembl	74_37	+1	known	missense	c.403	p.S135G	1.000	superfamily_Thr/Ala-tRNA-synth_IIc_edit,tigrfam_Thr-tRNA-ligase_IIa	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,pfscan_aa-tRNA-synth_II,prints_Thr-tRNA-ligase_IIa,tigrfam_Thr-tRNA-ligase_IIa	-	no_errors	TARS2	HGNC	ENSG00000143374				128	0	0	93	18	16.2162
CTSK	0	genome.wustl.edu	37	1	150769275	150769275	+	Nonstop_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	150769275	150769275	T	C	SNP	CTSK	ENST00000271651	human	ensembl	74_37	-1	known	nonstop	c.990	p.*330W	0.998	NULL	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,pfam_Peptidase_C1B,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSK	HGNC	ENSG00000143387				234	1	0.425532	187	17	8.33333
BNIPL	0	genome.wustl.edu	37	1	151011319	151011319	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	151011319	151011319	C	T	SNP	BNIPL	ENST00000368931	human	ensembl	74_37	+1	known	missense	c.250	p.R84C	1.000	pfam_Bcl2-/adenovirus-E1B	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	BNIPL	HGNC	ENSG00000163141				113	1	0.877193	95	6	5.94059
POGZ	0	genome.wustl.edu	37	1	151378412	151378412	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	151378412	151378412	C	T	SNP	POGZ	ENST00000271715	human	ensembl	74_37	-1	known	silent	c.3099	p.E1033	1.000	pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_Znf_C2H2	-	no_errors	POGZ	HGNC	ENSG00000143442				137	0	0	131	11	7.74648
CGN	0	genome.wustl.edu	37	1	151502489	151502489	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	151502489	151502489	G	A	SNP	CGN	ENST00000271636	human	ensembl	74_37	+1	known	silent	c.2211	p.R737	0.952	NULL	pfam_Myosin_tail	-	no_errors	CGN	HGNC	ENSG00000143375				152	0	0	125	11	8.08824
CGN	0	genome.wustl.edu	37	1	151509232	151509232	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	151509232	151509232	G	A	SNP	CGN	ENST00000271636	human	ensembl	74_37	+1	known	silent	c.3333	p.K1111	1.000	pfam_Myosin_tail	pfam_Myosin_tail	-	no_errors	CGN	HGNC	ENSG00000143375				95	0	0	70	14	16.6667
FLG	0	genome.wustl.edu	37	1	152280161	152280161	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	152280161	152280161	G	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.7201	p.R2401C	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				170	0	0	130	29	18.239
FLG	0	genome.wustl.edu	37	1	152280936	152280936	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	152280936	152280936	C	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	silent	c.6426	p.P2142	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				1003	1	0.0996016	770	95	10.9827
LCE1B	0	genome.wustl.edu	37	1	152785237	152785237	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	152785237	152785237	C	T	SNP	LCE1B	ENST00000360090	human	ensembl	74_37	+1	known	silent	c.315	p.C105	1.000	NULL	NULL	-	no_errors	LCE1B	HGNC	ENSG00000196734				112	0	0	74	6	7.5
SMCP	0	genome.wustl.edu	37	1	152857143	152857143	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	152857143	152857143	C	T	SNP	SMCP	ENST00000368765	human	ensembl	74_37	+1	known	missense	c.245	p.P82L	0.000	NULL	NULL	-	no_errors	SMCP	HGNC	ENSG00000163206				202	0	0	128	27	17.4194
ADAM15	0	genome.wustl.edu	37	1	155030118	155030118	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	155030118	155030118	C	T	SNP	ADAM15	ENST00000356955	human	ensembl	74_37	+1	known	silent	c.1329	p.C443	0.922	pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B_N,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM15	HGNC	ENSG00000143537				142	1	0.699301	68	17	20
FDPS	0	genome.wustl.edu	37	1	155287769	155287769	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	155287769	155287769	A	C	SNP	FDPS	ENST00000356657	human	ensembl	74_37	+1	known	missense	c.518	p.D173A	0.999	pfam_Polyprenyl_synt,superfamily_Terpenoid_synth	pfam_Polyprenyl_synt,superfamily_Terpenoid_synth	-	no_errors	FDPS	HGNC	ENSG00000160752				73	0	0	45	11	19.6429
ARHGEF2	0	genome.wustl.edu	37	1	155931599	155931599	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	155931599	155931599	G	A	SNP	ARHGEF2	ENST00000368315	human	ensembl	74_37	-1	known	missense	c.1324	p.R442C	1.000	superfamily_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF2	HGNC	ENSG00000116584				113	0	0	77	14	15.3846
MEX3A	0	genome.wustl.edu	37	1	156047381	156047381	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	156047381	156047381	G	A	SNP	MEX3A	ENST00000532414	human	ensembl	74_37	-1	known	missense	c.547	p.R183W	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3A	HGNC	ENSG00000254726				27	0	0	17	5	22.7273
GPATCH4	0	genome.wustl.edu	37	1	156568099	156568099	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	156568099	156568099	G	A	SNP	GPATCH4	ENST00000438976	human	ensembl	74_37	-1	known	missense	c.181	p.P61S	0.999	pfscan_G_patch_dom	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH4	HGNC	ENSG00000160818				206	0	0	149	28	15.8192
INSRR	0	genome.wustl.edu	37	1	156819054	156819054	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	156819054	156819054	G	A	SNP	INSRR	ENST00000368195	human	ensembl	74_37	-1	known	silent	c.1428	p.N476	1.000	pirsf_Tyr_kinase_insulin-like_rcpt	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSRR	HGNC	ENSG00000027644				150	0	0	81	13	13.8298
LRRC71	0	genome.wustl.edu	37	1	156902758	156902758	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	156902758	156902758	C	A	SNP	LRRC71	ENST00000337428	human	ensembl	74_37	+1	known	silent	c.1677	p.P559	0.128	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC71	HGNC	ENSG00000160838				12	0	0	3	4	57.1429
FCRL3	0	genome.wustl.edu	37	1	157648483	157648483	+	RNA	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	157648483	157648483	C	T	SNP	FCRL3	ENST00000468507	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FCRL3	HGNC	ENSG00000160856				146	0	0	107	27	20.1493
CELA2A	0	genome.wustl.edu	37	1	15788097	15788097	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	15788097	15788097	C	A	SNP	CELA2A	ENST00000359621	human	ensembl	74_37	+1	known	silent	c.171	p.T57	0.999	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA2A	HGNC	ENSG00000142615				126	0	0	124	7	5.34351
OR10K2	0	genome.wustl.edu	37	1	158389904	158389904	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	158389904	158389904	G	T	SNP	OR10K2	ENST00000314902	human	ensembl	74_37	-1	known	missense	c.753	p.H251Q	0.093	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10K2	HGNC	ENSG00000180708				90	0	0	76	20	20.8333
OR6Y1	0	genome.wustl.edu	37	1	158517023	158517023	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	158517023	158517023	G	T	SNP	OR6Y1	ENST00000302617	human	ensembl	74_37	-1	known	missense	c.873	p.N291K	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6Y1	HGNC	ENSG00000197532				155	0	0	108	30	21.7391
SPTA1	0	genome.wustl.edu	37	1	158647587	158647587	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	158647587	158647587	C	T	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.850	p.E284K	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				93	0	0	70	20	22.2222
IFI16	0	genome.wustl.edu	37	1	159021772	159021772	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	159021772	159021772	C	T	SNP	IFI16	ENST00000295809	human	ensembl	74_37	+1	known	nonsense	c.1969	p.R657*	0.000	pfam_HIN200/IF120x,pfscan_HIN200/IF120x	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	IFI16	HGNC	ENSG00000163565				105	0	0	80	7	8.04598
KCNJ10	0	genome.wustl.edu	37	1	160011276	160011276	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	160011276	160011276	G	A	SNP	KCNJ10	ENST00000368089	human	ensembl	74_37	-1	known	silent	c.1047	p.Y349	0.001	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.2	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.2,prints_K_chnl_inward-rec_Kir1.1	-	no_errors	KCNJ10	HGNC	ENSG00000177807				67	0	0	32	8	20
PPOX	0	genome.wustl.edu	37	1	161136994	161136994	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	161136994	161136994	G	A	SNP	PPOX	ENST00000352210	human	ensembl	74_37	+1	known	silent	c.192	p.A64	0.002	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	-	no_errors	PPOX	HGNC	ENSG00000143224				379	0	0	251	50	16.6113
UAP1	0	genome.wustl.edu	37	1	162549390	162549390	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	162549390	162549390	C	T	SNP	UAP1	ENST00000271469	human	ensembl	74_37	+1	known	missense	c.658	p.P220S	1.000	pfam_UDPGP_trans	pfam_UDPGP_trans	-	no_errors	UAP1	HGNC	ENSG00000117143				80	0	0	67	11	14.1026
RGS5	0	genome.wustl.edu	37	1	163131737	163131737	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	163131737	163131737	C	T	SNP	RGS5	ENST00000313961	human	ensembl	74_37	-1	known	missense	c.185	p.R62H	1.000	superfamily_Regulat_G_prot_signal_superfam,prints_RGS_dom	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS5	HGNC	ENSG00000143248				85	0	0	48	12	20
EPHA2	0	genome.wustl.edu	37	1	16459797	16459797	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	16459797	16459797	G	A	SNP	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	missense	c.1931	p.A644V	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627				130	0	0	89	17	16.0377
ARHGEF19	0	genome.wustl.edu	37	1	16532039	16532039	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	16532039	16532039	C	A	SNP	ARHGEF19	ENST00000270747	human	ensembl	74_37	-1	known	missense	c.1575	p.L525F	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF19	HGNC	ENSG00000142632				48	0	0	27	4	12.9032
LRRC52	0	genome.wustl.edu	37	1	165513722	165513722	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	165513722	165513722	C	T	SNP	LRRC52	ENST00000294818	human	ensembl	74_37	+1	known	silent	c.189	p.N63	0.997	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC52	HGNC	ENSG00000162763				230	0	0	134	48	26.3736
TMCO1	0	genome.wustl.edu	37	1	165712524	165712524	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	165712524	165712524	C	T	SNP	TMCO1	ENST00000367881	human	ensembl	74_37	-1	known	silent	c.501	p.K167	0.999	pfam_DUF106_TM	pfam_DUF106_TM	-	no_errors	TMCO1	HGNC	ENSG00000143183				88	0	0	71	12	14.4578
CROCCP2	0	genome.wustl.edu	37	1	16946324	16946324	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	16946324	16946324	G	A	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.058	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908				13	0	0	12	3	20
PRRC2C	0	genome.wustl.edu	37	1	171504671	171504671	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	171504671	171504671	G	A	SNP	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	missense	c.1978	p.A660T	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523				172	0	0	137	14	9.27152
RASAL2	0	genome.wustl.edu	37	1	178411822	178411822	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	178411822	178411822	C	T	SNP	RASAL2	ENST00000367649	human	ensembl	74_37	+1	known	nonsense	c.940	p.R314*	0.984	NULL	pfam_DUF3498,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,superfamily_PP1_inhibitor,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	RASAL2	HGNC	ENSG00000075391				97	0	0	58	8	12.1212
ZNF648	0	genome.wustl.edu	37	1	182026325	182026325	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	182026325	182026325	C	G	SNP	ZNF648	ENST00000339948	human	ensembl	74_37	-1	novel	missense	c.821	p.G274A	0.014	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930				28	0	0	14	4	22.2222
SWT1	0	genome.wustl.edu	37	1	185153998	185153998	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	185153998	185153998	A	G	SNP	SWT1	ENST00000367500	human	ensembl	74_37	+1	known	missense	c.1364	p.D455G	0.212	smart_PIN_dom	smart_PIN_dom	-	no_errors	SWT1	HGNC	ENSG00000116668				122	0	0	81	8	8.98876
IGSF21	0	genome.wustl.edu	37	1	18661448	18661448	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	18661448	18661448	G	A	SNP	IGSF21	ENST00000251296	human	ensembl	74_37	+1	known	missense	c.368	p.R123H	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	IGSF21	HGNC	ENSG00000117154				65	0	0	58	5	7.93651
PTGS2	0	genome.wustl.edu	37	1	186644585	186644585	+	RNA	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	186644585	186644585	A	G	SNP	PTGS2	ENST00000466691	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PTGS2	HGNC	ENSG00000073756				33	0	0	17	8	32
UBR4	0	genome.wustl.edu	37	1	19472403	19472403	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	19472403	19472403	G	A	SNP	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	missense	c.7829	p.P2610L	0.987	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481				82	0	0	58	18	23.6842
UBR4	0	genome.wustl.edu	37	1	19482887	19482887	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	19482887	19482887	C	A	SNP	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	missense	c.5950	p.G1984C	1.000	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481				80	0	0	60	11	15.493
LHX9	0	genome.wustl.edu	37	1	197898270	197898270	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	197898270	197898270	G	A	SNP	LHX9	ENST00000367387	human	ensembl	74_37	+1	known	missense	c.1075	p.A359T	1.000	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX9	HGNC	ENSG00000143355				132	0	0	73	20	21.5054
DSTYK	0	genome.wustl.edu	37	1	205128707	205128707	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	205128707	205128707	G	A	SNP	DSTYK	ENST00000367162	human	ensembl	74_37	-1	known	missense	c.2206	p.R736W	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DSTYK	HGNC	ENSG00000133059				26	0	0	18	7	28
PLXNA2	0	genome.wustl.edu	37	1	208225674	208225674	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	208225674	208225674	G	A	SNP	PLXNA2	ENST00000367033	human	ensembl	74_37	-1	known	silent	c.2991	p.Y997	0.302	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA2	HGNC	ENSG00000076356				133	0	0	83	15	15.3061
KIF17	0	genome.wustl.edu	37	1	20992758	20992758	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	20992758	20992758	G	A	SNP	KIF17	ENST00000247986	human	ensembl	74_37	-1	known	nonsense	c.2860	p.R954*	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF17	HGNC	ENSG00000117245				173	1	0.574713	152	11	6.74847
CENPF	0	genome.wustl.edu	37	1	214794185	214794185	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	214794185	214794185	C	A	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	missense	c.761	p.P254Q	0.976	pfam_Centromere_CenpF_N	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724				129	0	0	78	20	20.4082
USH2A	0	genome.wustl.edu	37	1	215824087	215824087	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	215824087	215824087	G	A	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	silent	c.14190	p.T4730	0.002	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				234	0	0	178	49	21.5859
RAP1GAP	0	genome.wustl.edu	37	1	21938056	21938056	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	21938056	21938056	G	A	SNP	RAP1GAP	ENST00000290101	human	ensembl	74_37	-1	known	silent	c.924	p.D308	0.998	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	pfam_Rap_GAP_dom,pfam_GoLoco_motif,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_Rap_GAP_dom	-	no_errors	RAP1GAP	HGNC	ENSG00000076864				106	0	0	60	21	25.9259
MARK1	0	genome.wustl.edu	37	1	220826691	220826691	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	220826691	220826691	G	A	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.1985	p.R662H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141				69	0	0	50	15	23.0769
HLX	0	genome.wustl.edu	37	1	221057717	221057717	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	221057717	221057717	G	A	SNP	HLX	ENST00000366903	human	ensembl	74_37	+1	known	missense	c.1138	p.D380N	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	HLX	HGNC	ENSG00000136630				57	0	0	36	11	23.4043
HSPG2	0	genome.wustl.edu	37	1	22160083	22160083	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	22160083	22160083	T	C	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.10855	p.S3619G	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				92	0	0	60	10	14.2857
HSPG2	0	genome.wustl.edu	37	1	22205552	22205552	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	22205552	22205552	G	A	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	silent	c.2406	p.D802	0.924	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				65	0	0	53	8	13.1148
ITPKB	0	genome.wustl.edu	37	1	226829622	226829622	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	226829622	226829622	C	A	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	missense	c.2451	p.K817N	1.000	pfam_IPK	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772				145	0	0	124	10	7.46269
ARF1	0	genome.wustl.edu	37	1	228285343	228285343	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	228285343	228285343	G	A	SNP	ARF1	ENST00000272102	human	ensembl	74_37	+1	known	missense	c.311	p.R104H	0.997	pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Small_GTPase,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,smart_Small_GTPase_Rab_type,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Small_GTPase,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARF1	HGNC	ENSG00000143761				118	0	0	102	21	17.0732
OBSCN	0	genome.wustl.edu	37	1	228400308	228400308	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	228400308	228400308	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.824	p.G275D	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				134	0	0	96	6	5.88235
OBSCN	0	genome.wustl.edu	37	1	228412242	228412242	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	228412242	228412242	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	silent	c.2736	p.C912	0.954	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				75	0	0	61	7	10.2941
OBSCN	0	genome.wustl.edu	37	1	228433175	228433175	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	228433175	228433175	G	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	silent	c.3543	p.G1181	0.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				114	0	0	70	12	14.6341
LYST	0	genome.wustl.edu	37	1	235916502	235916502	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	235916502	235916502	T	C	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	missense	c.7302	p.I2434M	0.607	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669				125	0	0	103	24	18.8976
LYST	0	genome.wustl.edu	37	1	235920596	235920596	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	235920596	235920596	T	C	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	silent	c.7044	p.Q2348	0.997	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669				70	0	0	45	11	19.6429
NID1	0	genome.wustl.edu	37	1	236201529	236201529	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	236201529	236201529	C	T	SNP	NID1	ENST00000264187	human	ensembl	74_37	-1	known	missense	c.1160	p.R387H	0.828	smart_EGF-like_Ca-bd_dom	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd_dom,superfamily_GFP,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_G2_nidogen/fibulin_G2F,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID1	HGNC	ENSG00000116962				125	0	0	94	11	10.4762
GALE	0	genome.wustl.edu	37	1	24122987	24122987	+	RNA	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	24122987	24122987	G	T	SNP	GALE	ENST00000469556	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GALE	HGNC	ENSG00000117308				72	0	0	50	11	18.0328
EXO1	0	genome.wustl.edu	37	1	242042157	242042157	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	242042157	242042157	G	A	SNP	EXO1	ENST00000348581	human	ensembl	74_37	+1	known	missense	c.1621	p.E541K	0.218	NULL	pfam_XPG-I_dom,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	EXO1	HGNC	ENSG00000174371				90	0	0	55	14	20.2899
ZBTB18	0	genome.wustl.edu	37	1	244218334	244218334	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	244218334	244218334	A	G	SNP	ZBTB18	ENST00000358704	human	ensembl	74_37	+1	known	missense	c.1258	p.T420A	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB18	HGNC	ENSG00000179456				125	0	0	78	8	9.30233
KIF26B	0	genome.wustl.edu	37	1	245849800	245849800	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	245849800	245849800	C	T	SNP	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	missense	c.3515	p.T1172M	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849				78	0	0	46	15	24.5902
SCCPDH	0	genome.wustl.edu	37	1	246921560	246921560	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	246921560	246921560	A	G	SNP	SCCPDH	ENST00000366510	human	ensembl	74_37	+1	known	silent	c.597	p.S199	0.991	pfam_Saccharopine_DH/HSpermid_syn	pfam_Saccharopine_DH/HSpermid_syn	-	no_errors	SCCPDH	HGNC	ENSG00000143653				68	0	0	54	5	8.47458
ARID1A	0	genome.wustl.edu	37	1	27097630	27097630	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	27097630	27097630	G	A	SNP	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	nonsense	c.3219	p.W1073*	1.000	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				64	0	0	46	4	8
SYTL1	0	genome.wustl.edu	37	1	27673938	27673938	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	27673938	27673938	C	A	SNP	SYTL1	ENST00000543823	human	ensembl	74_37	+1	known	missense	c.218	p.P73H	0.915	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL1	HGNC	ENSG00000142765				92	0	0	58	10	14.7059
AHDC1	0	genome.wustl.edu	37	1	27876334	27876334	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	27876334	27876334	C	A	SNP	AHDC1	ENST00000247087	human	ensembl	74_37	-1	known	missense	c.2293	p.G765C	0.635	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705				98	0	0	85	7	7.6087
HCRTR1	0	genome.wustl.edu	37	1	32090630	32090630	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	32090630	32090630	G	A	SNP	HCRTR1	ENST00000373706	human	ensembl	74_37	+1	known	missense	c.998	p.R333H	0.999	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Orexin_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Orexin_rcpt,prints_GPCR_Rhodpsn,prints_Orexin_rcpt_1,prints_NPY_rcpt	-	no_errors	HCRTR1	HGNC	ENSG00000121764				106	1	0.934579	82	18	18
RBBP4	0	genome.wustl.edu	37	1	33134427	33134427	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	33134427	33134427	G	T	SNP	RBBP4	ENST00000373493	human	ensembl	74_37	+1	known	missense	c.572	p.G191V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Histone-bd_RBBP4_N,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RBBP4	HGNC	ENSG00000162521				130	0	0	86	13	13.1313
KIAA1522	0	genome.wustl.edu	37	1	33237694	33237694	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	33237694	33237694	T	C	SNP	KIAA1522	ENST00000401073	human	ensembl	74_37	+1	known	missense	c.2914	p.F972L	1.000	NULL	NULL	-	no_errors	KIAA1522	HGNC	ENSG00000162522				42	0	0	24	5	17.2414
DLGAP3	0	genome.wustl.edu	37	1	35334674	35334674	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	35334674	35334674	G	A	SNP	DLGAP3	ENST00000235180	human	ensembl	74_37	-1	known	missense	c.2017	p.R673C	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP3	HGNC	ENSG00000116544				24	0	0	16	6	27.2727
MACF1	0	genome.wustl.edu	37	1	39797522	39797522	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	39797522	39797522	A	T	SNP	MACF1	ENST00000567887	human	ensembl	74_37	+1	putative	missense	c.5373	p.E1791D	1.000	superfamily_RNaseH-like_dom,smart_Plectin_repeat	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603				95	0	0	50	16	24.2424
NT5C1A	0	genome.wustl.edu	37	1	40131256	40131256	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	40131256	40131256	C	T	SNP	NT5C1A	ENST00000235628	human	ensembl	74_37	-1	known	missense	c.370	p.V124I	1.000	pfam_5-nucleotidase	pfam_5-nucleotidase	-	no_errors	NT5C1A	HGNC	ENSG00000116981				54	0	0	41	7	14.5833
OXCT2	0	genome.wustl.edu	37	1	40236095	40236095	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	40236095	40236095	C	T	SNP	OXCT2	ENST00000327582	human	ensembl	74_37	-1	known	missense	c.833	p.R278Q	0.820	pirsf_3-oxoacid_CoA-transferase	pfam_CoA_trans_fam_I,smart_CoA_trans_fam_I,pirsf_3-oxoacid_CoA-transferase,tigrfam_3-oxoacid_CoA-transf_B,tigrfam_3-oxoacid_CoA-transf_A	-	no_errors	OXCT2	HGNC	ENSG00000198754				153	0	0	110	21	16.0305
SLFNL1	0	genome.wustl.edu	37	1	41486228	41486228	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	41486228	41486228	C	T	SNP	SLFNL1	ENST00000302946	human	ensembl	74_37	-1	known	silent	c.105	p.T35	0.000	NULL	pfam_ATPase_AAA-4	-	no_errors	SLFNL1	HGNC	ENSG00000171790				138	0	0	99	18	15.3846
HIVEP3	0	genome.wustl.edu	37	1	42049025	42049025	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	42049025	42049025	C	T	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.1444	p.D482N	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				154	0	0	112	9	7.43802
CCDC30	0	genome.wustl.edu	37	1	43032075	43032075	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	43032075	43032075	C	T	SNP	CCDC30	ENST00000340612	human	ensembl	74_37	+1	known	missense	c.784	p.L262F	1.000	NULL	NULL	-	no_errors	CCDC30	HGNC	ENSG00000186409				121	1	0.819672	82	15	15.4639
CLDN19	0	genome.wustl.edu	37	1	43204116	43204116	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	43204116	43204116	C	T	SNP	CLDN19	ENST00000296387	human	ensembl	74_37	-1	known	missense	c.364	p.G122R	1.000	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	-	no_errors	CLDN19	HGNC	ENSG00000164007				84	0	0	57	6	9.52381
TMEM125	0	genome.wustl.edu	37	1	43738577	43738577	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	43738577	43738577	C	T	SNP	TMEM125	ENST00000432792	human	ensembl	74_37	+1	known	missense	c.184	p.R62C	1.000	NULL	NULL	-	no_errors	TMEM125	HGNC	ENSG00000179178				28	0	0	20	2	9.09091
TIE1	0	genome.wustl.edu	37	1	43774660	43774660	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	43774660	43774660	G	A	SNP	TIE1	ENST00000372476	human	ensembl	74_37	+1	known	missense	c.1046	p.R349Q	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TIE1	HGNC	ENSG00000066056				78	0	0	53	17	24.2857
SZT2	0	genome.wustl.edu	37	1	43896975	43896975	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	43896975	43896975	A	G	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	silent	c.4785	p.P1595	0.761	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198				288	0	0	200	32	13.7931
SZT2	0	genome.wustl.edu	37	1	43908165	43908165	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	43908165	43908165	G	A	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	missense	c.7856	p.R2619Q	1.000	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198				109	0	0	69	11	13.75
SLC6A9	0	genome.wustl.edu	37	1	44467245	44467245	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	44467245	44467245	G	A	SNP	SLC6A9	ENST00000360584	human	ensembl	74_37	-1	known	silent	c.1236	p.F412	0.097	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_glycine_GLY1	-	no_errors	SLC6A9	HGNC	ENSG00000196517				226	0	0	148	43	22.5131
TESK2	0	genome.wustl.edu	37	1	45811603	45811603	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	45811603	45811603	G	A	SNP	TESK2	ENST00000372086	human	ensembl	74_37	-1	known	missense	c.943	p.R315C	0.127	superfamily_Kinase-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK2	HGNC	ENSG00000070759				113	0	0	94	5	5.05051
MOB3C	0	genome.wustl.edu	37	1	47078943	47078943	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	47078943	47078943	C	T	SNP	MOB3C	ENST00000271139	human	ensembl	74_37	-1	known	silent	c.207	p.P69	0.010	superfamily_Mob1_phocein	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB3C	HGNC	ENSG00000142961				137	0	0	108	30	21.7391
FOXD2	0	genome.wustl.edu	37	1	47904538	47904538	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	47904538	47904538	G	A	SNP	FOXD2	ENST00000334793	human	ensembl	74_37	+1	known	missense	c.731	p.R244H	0.994	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD2	HGNC	ENSG00000186564				38	0	0	16	7	30.4348
BEND5	0	genome.wustl.edu	37	1	49224924	49224924	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	49224924	49224924	C	T	SNP	BEND5	ENST00000371833	human	ensembl	74_37	-1	known	silent	c.393	p.A131	0.694	NULL	pfam_BEN_domain	-	no_errors	BEND5	HGNC	ENSG00000162373				14	0	0	9	3	25
DMRTA2	0	genome.wustl.edu	37	1	50884936	50884936	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	50884936	50884936	C	T	SNP	DMRTA2	ENST00000404795	human	ensembl	74_37	-1	known	missense	c.1030	p.V344M	1.000	pfam_DMA,superfamily_UBA-like	pfam_DM_DNA-bd,pfam_DMA,superfamily_DM_DNA-bd,superfamily_UBA-like,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRTA2	HGNC	ENSG00000142700				37	0	0	28	4	12.5
FAF1	0	genome.wustl.edu	37	1	50941230	50941230	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	50941230	50941230	G	A	SNP	FAF1	ENST00000371778	human	ensembl	74_37	-1	known	missense	c.1775	p.A592V	1.000	pfam_UBX,smart_UBX,pfscan_UBX	pfam_UBX,superfamily_UBA-like,smart_UAS,smart_UBX,pfscan_UBX	-	no_errors	FAF1	HGNC	ENSG00000185104				85	0	0	64	23	26.4368
DAB1	0	genome.wustl.edu	37	1	57476354	57476354	+	RNA	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	57476354	57476354	C	A	SNP	DAB1	ENST00000485760	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DAB1	HGNC	ENSG00000173406				119	0	0	86	20	18.8679
LEPR	0	genome.wustl.edu	37	1	66102159	66102159	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	66102159	66102159	G	A	SNP	LEPR	ENST00000349533	human	ensembl	74_37	+1	known	missense	c.2959	p.A987T	0.999	NULL	pfam_IgC2-like_lig-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LEPR	HGNC	ENSG00000116678				98	0	0	57	23	28.75
PTGER3	0	genome.wustl.edu	37	1	71512649	71512649	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	71512649	71512649	G	A	SNP	PTGER3	ENST00000354608	human	ensembl	74_37	-1	known	silent	c.612	p.P204	0.988	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prostanoid_rcpt,prints_Thbox_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srbc,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_EP3_rcpt,prints_Prostanoid_rcpt,prints_EP3_rcpt_2,prints_Prostglndn_DP_rcpt,prints_GPCR_Rhodpsn,prints_Thbox_rcpt	-	no_errors	PTGER3	HGNC	ENSG00000050628				133	0	0	105	11	9.48276
FPGT-TNNI3K	0	genome.wustl.edu	37	1	74834918	74834918	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	74834918	74834918	G	A	SNP	FPGT-TNNI3K	ENST00000557284	human	ensembl	74_37	+1	known	missense	c.1784	p.R595Q	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	FPGT-TNNI3K	HGNC	ENSG00000259030				74	0	0	40	4	9.09091
SLC44A5	0	genome.wustl.edu	37	1	75679471	75679471	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	75679471	75679471	C	A	SNP	SLC44A5	ENST00000370855	human	ensembl	74_37	-1	known	silent	c.1881	p.L627	0.998	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A5	HGNC	ENSG00000137968				108	1	0.917431	64	20	23.8095
LRRC8B	0	genome.wustl.edu	37	1	90049769	90049769	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	90049769	90049769	T	C	SNP	LRRC8B	ENST00000330947	human	ensembl	74_37	+1	known	silent	c.1560	p.C520	0.953	smart_Leu-rich_rpt_typical-subtyp	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8B	HGNC	ENSG00000197147				132	0	0	69	18	20.6897
ABCA4	0	genome.wustl.edu	37	1	94528700	94528700	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	94528700	94528700	G	A	SNP	ABCA4	ENST00000370225	human	ensembl	74_37	-1	known	silent	c.1728	p.D576	1.000	tigrfam_Rim_ABC_transpt	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Rim_ABC_transpt	-	no_errors	ABCA4	HGNC	ENSG00000198691				235	0	0	140	46	24.7312
PIK3CD	0	genome.wustl.edu	37	1	9781280	9781280	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	9781280	9781280	C	T	SNP	PIK3CD	ENST00000536656	human	ensembl	74_37	+1	known	silent	c.1857	p.F619	0.732	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CD	HGNC	ENSG00000171608				108	0	0	89	23	20.5357
CLSTN1	0	genome.wustl.edu	37	1	9791937	9791937	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	9791937	9791937	C	A	SNP	CLSTN1	ENST00000377298	human	ensembl	74_37	-1	known	silent	c.2445	p.T815	0.522	NULL	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CLSTN1	HGNC	ENSG00000171603				102	0	0	57	19	25
PKD2L1	0	genome.wustl.edu	37	10	102054765	102054765	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	102054765	102054765	T	C	SNP	PKD2L1	ENST00000318222	human	ensembl	74_37	-1	known	missense	c.1472	p.Y491C	1.000	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2,prints_PKD_1	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2,prints_PKD_1	-	no_errors	PKD2L1	HGNC	ENSG00000107593				103	0	0	76	5	6.17284
SEC31B	0	genome.wustl.edu	37	10	102267696	102267696	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	102267696	102267696	G	T	SNP	SEC31B	ENST00000370345	human	ensembl	74_37	-1	known	missense	c.608	p.P203H	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31B	HGNC	ENSG00000075826				162	0	0	123	9	6.81818
PDCD11	0	genome.wustl.edu	37	10	105200581	105200581	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	105200581	105200581	G	A	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.4531	p.A1511T	0.000	NULL	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843				78	0	0	51	18	26.087
IDI2	0	genome.wustl.edu	37	10	1065710	1065710	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	1065710	1065710	C	T	SNP	IDI2	ENST00000277517	human	ensembl	74_37	-1	known	nonsense	c.431	p.W144*	1.000	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	-	no_errors	IDI2	HGNC	ENSG00000148377				135	0	0	79	20	20.202
PDCD4	0	genome.wustl.edu	37	10	112647591	112647591	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	112647591	112647591	A	G	SNP	PDCD4	ENST00000280154	human	ensembl	74_37	+1	known	missense	c.724	p.K242E	1.000	pfam_Initiation_fac_eIF4g_MI,superfamily_ARM-type_fold,smart_Initiation_fac_eIF4g_MI	pfam_Initiation_fac_eIF4g_MI,superfamily_ARM-type_fold,smart_Initiation_fac_eIF4g_MI	-	no_errors	PDCD4	HGNC	ENSG00000150593				120	0	0	109	19	14.8438
GPAM	0	genome.wustl.edu	37	10	113917103	113917103	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	113917103	113917103	C	T	SNP	GPAM	ENST00000348367	human	ensembl	74_37	-1	known	silent	c.2025	p.Q675	1.000	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	GPAM	HGNC	ENSG00000119927				86	0	0	58	6	9.375
DHTKD1	0	genome.wustl.edu	37	10	12148275	12148275	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	12148275	12148275	G	A	SNP	DHTKD1	ENST00000263035	human	ensembl	74_37	+1	known	missense	c.1927	p.V643I	1.000	pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_Transketolase-like_Pyr-bd,pfam_DH_E1,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	DHTKD1	HGNC	ENSG00000181192				144	0	0	82	34	29.3103
CPXM2	0	genome.wustl.edu	37	10	125528203	125528203	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	125528203	125528203	C	T	SNP	CPXM2	ENST00000241305	human	ensembl	74_37	-1	known	missense	c.1138	p.G380S	1.000	pfam_Peptidase_M14,prints_Peptidase_M14	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	CPXM2	HGNC	ENSG00000121898				173	0	0	111	16	12.5984
LHPP	0	genome.wustl.edu	37	10	126186676	126186676	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	126186676	126186676	G	A	SNP	LHPP	ENST00000368842	human	ensembl	74_37	+1	known	silent	c.603	p.A201	0.500	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_HAD-SF_hydro_IIA_hyp2,tigrfam_HAD-SF_hydro_IIA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_HAD-SF_hydro_IIA_hyp2,tigrfam_HAD-SF_hydro_IIA	-	no_errors	LHPP	HGNC	ENSG00000107902				119	1	0.833333	82	14	14.5833
CTBP2	0	genome.wustl.edu	37	10	126714993	126714993	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	126714993	126714993	C	T	SNP	CTBP2	ENST00000309035	human	ensembl	74_37	-1	known	missense	c.1336	p.A446T	0.397	NULL	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	CTBP2	HGNC	ENSG00000175029				64	0	0	40	4	9.09091
C10orf137	0	genome.wustl.edu	37	10	127414391	127414391	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	127414391	127414391	C	T	SNP	C10orf137	ENST00000356792	human	ensembl	74_37	+1	known	missense	c.776	p.P259L	1.000	NULL	NULL	-	no_errors	C10orf137	HGNC	ENSG00000107938				73	0	0	61	8	11.5942
PTPRE	0	genome.wustl.edu	37	10	129881123	129881123	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	129881123	129881123	G	A	SNP	PTPRE	ENST00000254667	human	ensembl	74_37	+1	known	missense	c.2056	p.V686I	1.000	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRE	HGNC	ENSG00000132334				81	0	0	31	11	26.1905
MCM10	0	genome.wustl.edu	37	10	13213034	13213034	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	13213034	13213034	C	T	SNP	MCM10	ENST00000484800	human	ensembl	74_37	+1	known	silent	c.120	p.D40	0.006	NULL	pfam_Rep_factor_Mcm10,pfam_Znf_Mcm10/DnaG	-	no_errors	MCM10	HGNC	ENSG00000065328				265	0	0	201	31	13.3621
MCM10	0	genome.wustl.edu	37	10	13222486	13222486	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	13222486	13222486	G	A	SNP	MCM10	ENST00000484800	human	ensembl	74_37	+1	known	missense	c.812	p.G271D	1.000	NULL	pfam_Rep_factor_Mcm10,pfam_Znf_Mcm10/DnaG	-	no_errors	MCM10	HGNC	ENSG00000065328				124	0	0	65	26	28.5714
FRMD4A	0	genome.wustl.edu	37	10	13824973	13824973	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	13824973	13824973	A	G	SNP	FRMD4A	ENST00000357447	human	ensembl	74_37	-1	known	silent	c.333	p.D111	0.884	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_DUF3338,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	-	no_errors	FRMD4A	HGNC	ENSG00000151474				215	1	0.462963	142	41	22.4044
ST8SIA6	0	genome.wustl.edu	37	10	17495589	17495589	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	17495589	17495589	G	T	SNP	ST8SIA6	ENST00000377602	human	ensembl	74_37	-1	known	missense	c.169	p.P57T	0.010	pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA6	HGNC	ENSG00000148488				24	0	0	8	3	27.2727
NEBL	0	genome.wustl.edu	37	10	21157652	21157652	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	21157652	21157652	C	T	SNP	NEBL	ENST00000377122	human	ensembl	74_37	-1	known	missense	c.625	p.A209T	0.860	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	NEBL	HGNC	ENSG00000078114				136	1	0.729927	106	24	18.4615
LRRC37A6P	0	genome.wustl.edu	37	10	27537926	27537926	+	RNA	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	27537926	27537926	G	T	SNP	LRRC37A6P	ENST00000284414	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	LRRC37A6P	HGNC	ENSG00000230445				184	0	0	100	17	14.5299
ARMC4	0	genome.wustl.edu	37	10	28283978	28283978	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	28283978	28283978	T	A	SNP	ARMC4	ENST00000305242	human	ensembl	74_37	-1	known	nonsense	c.94	p.K32*	0.943	NULL	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_GSKIP_dom,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC4	HGNC	ENSG00000169126				91	0	0	58	5	7.93651
SVIL	0	genome.wustl.edu	37	10	29813608	29813608	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	29813608	29813608	C	A	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.2379	p.K793N	0.985	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				200	0	0	145	49	25.2577
SVIL	0	genome.wustl.edu	37	10	29821018	29821018	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	29821018	29821018	C	T	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.1922	p.R641H	1.000	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				129	0	0	95	7	6.86275
PFKP	0	genome.wustl.edu	37	10	3151612	3151612	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	3151612	3151612	C	T	SNP	PFKP	ENST00000381125	human	ensembl	74_37	+1	known	silent	c.1029	p.C343	0.996	pirsf_6-phosphofructokinase_euk,tigrfam_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKP	HGNC	ENSG00000067057				46	0	0	26	6	18.75
ENSG00000264248	0	genome.wustl.edu	37	10	323220	323220	+	RNA	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	323220	323220	A	C	SNP	ENSG00000264248	ENST00000579524	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AL603831.1	Clone_based_ensembl_gene	ENSG00000264248				62	0	0	41	18	30.5085
HNRNPF	0	genome.wustl.edu	37	10	43882892	43882892	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	43882892	43882892	G	A	SNP	HNRNPF	ENST00000337970	human	ensembl	74_37	-1	known	silent	c.441	p.P147	0.958	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_Znf_CHHC,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPF	HGNC	ENSG00000169813				157	0	0	114	29	20.2797
RBP3	0	genome.wustl.edu	37	10	48389461	48389461	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	48389461	48389461	G	T	SNP	RBP3	ENST00000224600	human	ensembl	74_37	-1	known	missense	c.1417	p.H473N	1.000	pfam_Interphotoreceptor_retinol-bd,smart_Interphotoreceptor_retinol-bd	pfam_Interphotoreceptor_retinol-bd,pfam_Interphotorcpt_retinol-bd_N,smart_Interphotoreceptor_retinol-bd	-	no_errors	RBP3	HGNC	ENSG00000107618				62	0	0	34	7	17.0732
ERCC6	0	genome.wustl.edu	37	10	50740814	50740814	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	50740814	50740814	G	A	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	missense	c.197	p.P66L	0.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830				117	1	0.847458	69	19	21.5909
AKR1C4	0	genome.wustl.edu	37	10	5255081	5255081	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	5255081	5255081	G	A	SNP	AKR1C4	ENST00000263126	human	ensembl	74_37	+1	known	missense	c.805	p.A269T	0.990	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1C4	HGNC	ENSG00000198610				91	0	0	56	6	9.67742
TUBAL3	0	genome.wustl.edu	37	10	5436175	5436175	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	5436175	5436175	C	T	SNP	TUBAL3	ENST00000380419	human	ensembl	74_37	-1	known	missense	c.646	p.V216I	0.780	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Tubulin,prints_Delta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBAL3	HGNC	ENSG00000178462				96	0	0	61	11	15.2778
PCDH15	0	genome.wustl.edu	37	10	55581693	55581693	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	55581693	55581693	T	G	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.5793	p.E1931D	0.894	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				103	0	0	84	20	19.2308
CCDC6	0	genome.wustl.edu	37	10	61665922	61665922	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	61665922	61665922	C	T	SNP	CCDC6	ENST00000263102	human	ensembl	74_37	-1	known	silent	c.261	p.L87	1.000	pfam_DUF2046	pfam_DUF2046	-	no_errors	CCDC6	HGNC	ENSG00000108091				137	0	0	81	19	19
SLC25A16	0	genome.wustl.edu	37	10	70263442	70263442	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	70263442	70263442	G	A	SNP	SLC25A16	ENST00000609923	human	ensembl	74_37	-1	known	missense	c.368	p.T123M	0.973	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,prints_Graves_DC	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Graves_DC,prints_Mit_carrier	-	no_errors	SLC25A16	HGNC	ENSG00000122912				117	1	0.847458	92	26	22.0339
KIAA1279	0	genome.wustl.edu	37	10	70748821	70748821	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	70748821	70748821	C	T	SNP	KIAA1279	ENST00000361983	human	ensembl	74_37	+1	known	missense	c.233	p.A78V	0.047	NULL	pfam_KBP	-	no_errors	KIAA1279	HGNC	ENSG00000198954				54	0	0	59	10	14.4928
ADAMTS14	0	genome.wustl.edu	37	10	72511376	72511376	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	72511376	72511376	C	T	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	missense	c.2579	p.A860V	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316				99	0	0	64	7	9.85915
PCBD1	0	genome.wustl.edu	37	10	72645663	72645663	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	72645663	72645663	G	A	SNP	PCBD1	ENST00000299299	human	ensembl	74_37	-1	known	silent	c.27	p.S9	0.300	pfam_Trans/pterin_deHydtase,superfamily_Trans/pterin_deHydtase	pfam_Trans/pterin_deHydtase,superfamily_Trans/pterin_deHydtase	-	no_errors	PCBD1	HGNC	ENSG00000166228				53	0	0	32	5	13.5135
SLC29A3	0	genome.wustl.edu	37	10	73082600	73082600	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	73082600	73082600	C	T	SNP	SLC29A3	ENST00000373189	human	ensembl	74_37	+1	known	missense	c.89	p.A30V	0.086	NULL	pfam_Eqnu_transpt,prints_Eqnu_transpt	-	no_errors	SLC29A3	HGNC	ENSG00000198246				197	0	0	126	18	12.5
DUSP13	0	genome.wustl.edu	37	10	76855374	76855374	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	76855374	76855374	G	T	SNP	DUSP13	ENST00000491677	human	ensembl	74_37	-1	known	missense	c.740	p.P247H	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP13	HGNC	ENSG00000079393				128	0	0	88	12	12
ZNF503	0	genome.wustl.edu	37	10	77158710	77158710	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	77158710	77158710	C	T	SNP	ZNF503	ENST00000372524	human	ensembl	74_37	-1	known	missense	c.1738	p.A580T	0.996	NULL	pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2	-	no_errors	ZNF503	HGNC	ENSG00000165655				31	0	0	15	3	16.6667
ZNF503	0	genome.wustl.edu	37	10	77159254	77159254	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	77159254	77159254	C	T	SNP	ZNF503	ENST00000372524	human	ensembl	74_37	-1	known	silent	c.1194	p.A398	0.995	pfam_Tscrpt_rep_NocA-like	pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2	-	no_errors	ZNF503	HGNC	ENSG00000165655				20	0	0	11	3	21.4286
GATA3	0	genome.wustl.edu	37	10	8106092	8106092	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	8106092	8106092	G	A	SNP	GATA3	ENST00000379328	human	ensembl	74_37	+1	known	silent	c.915	p.K305	1.000	smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485				145	0	0	108	16	12.9032
LRIT1	0	genome.wustl.edu	37	10	85997212	85997212	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	85997212	85997212	C	T	SNP	LRIT1	ENST00000372105	human	ensembl	74_37	-1	known	missense	c.353	p.R118H	0.987	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRIT1	HGNC	ENSG00000148602				10	0	0	8	5	38.4615
MMRN2	0	genome.wustl.edu	37	10	88702910	88702910	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	88702910	88702910	G	A	SNP	MMRN2	ENST00000372027	human	ensembl	74_37	-1	known	missense	c.1631	p.S544L	0.003	superfamily_tRNA-bd_arm	pfam_C1q,pfam_EMI_domain,superfamily_Tumour_necrosis_fac-like_dom,superfamily_tRNA-bd_arm,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	MMRN2	HGNC	ENSG00000173269				28	0	0	21	4	16
CYP26A1	0	genome.wustl.edu	37	10	94834065	94834065	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	94834065	94834065	C	T	SNP	CYP26A1	ENST00000224356	human	ensembl	74_37	+1	known	missense	c.190	p.R64W	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP26A1	HGNC	ENSG00000095596				80	0	0	34	11	24.4444
CYP26A1	0	genome.wustl.edu	37	10	94834777	94834777	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	94834777	94834777	G	A	SNP	CYP26A1	ENST00000224356	human	ensembl	74_37	+1	known	missense	c.656	p.R219H	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP26A1	HGNC	ENSG00000095596				111	1	0.892857	78	7	8.23529
PLCE1	0	genome.wustl.edu	37	10	96005982	96005982	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	96005982	96005982	C	T	SNP	PLCE1	ENST00000260766	human	ensembl	74_37	+1	known	silent	c.2700	p.S900	0.934	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_dom,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,smart_Ras-assoc,pfscan_C2_dom,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C	-	no_errors	PLCE1	HGNC	ENSG00000138193				85	0	0	41	11	21.1538
CYP2C19	0	genome.wustl.edu	37	10	96535246	96535246	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	96535246	96535246	G	A	SNP	CYP2C19	ENST00000371321	human	ensembl	74_37	+1	known	missense	c.431	p.R144H	0.699	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2C19	HGNC	ENSG00000165841				211	0	0	141	16	10.1911
MUC6	0	genome.wustl.edu	37	11	1017296	1017296	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	1017296	1017296	T	C	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	silent	c.5505	p.T1835	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				1067	1	0.093633	858	46	5.0885
CUL5	0	genome.wustl.edu	37	11	107920713	107920713	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	107920713	107920713	T	C	SNP	CUL5	ENST00000393094	human	ensembl	74_37	+1	known	missense	c.331	p.F111L	1.000	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL5	HGNC	ENSG00000166266				92	0	0	81	12	12.9032
ACAT1	0	genome.wustl.edu	37	11	108017007	108017007	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	108017007	108017007	G	A	SNP	ACAT1	ENST00000265838	human	ensembl	74_37	+1	known	missense	c.1084	p.A362T	1.000	pfam_Thiolase_C,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,pfam_Ketoacyl_synth_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAT1	HGNC	ENSG00000075239				177	0	0	115	14	10.8527
MUC2	0	genome.wustl.edu	37	11	1086062	1086062	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	1086062	1086062	G	A	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.2902	p.V968I	0.001	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				42	0	0	36	3	7.69231
ZC3H12C	0	genome.wustl.edu	37	11	110035243	110035243	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	110035243	110035243	G	T	SNP	ZC3H12C	ENST00000278590	human	ensembl	74_37	+1	known	missense	c.1433	p.S478I	0.995	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12C	HGNC	ENSG00000149289				97	0	0	53	4	7.01754
ANKK1	0	genome.wustl.edu	37	11	113268037	113268037	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	113268037	113268037	C	T	SNP	ANKK1	ENST00000303941	human	ensembl	74_37	+1	known	silent	c.930	p.C310	0.004	NULL	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	ANKK1	HGNC	ENSG00000170209				66	0	0	36	8	18.1818
ANKK1	0	genome.wustl.edu	37	11	113270600	113270600	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	113270600	113270600	G	A	SNP	ANKK1	ENST00000303941	human	ensembl	74_37	+1	known	missense	c.1909	p.G637R	0.007	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	ANKK1	HGNC	ENSG00000170209				34	0	0	25	3	10.7143
HYOU1	0	genome.wustl.edu	37	11	118919979	118919979	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	118919979	118919979	C	A	SNP	HYOU1	ENST00000543287	human	ensembl	74_37	-1	known	missense	c.1649	p.R550L	0.000	NULL	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HYOU1	HGNC	ENSG00000149428				23	0	0	17	3	15
VPS11	0	genome.wustl.edu	37	11	118941055	118941055	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	118941055	118941055	G	A	SNP	VPS11	ENST00000300793	human	ensembl	74_37	+1	known	missense	c.581	p.R194H	1.000	superfamily_WD40_repeat_dom,pirsf_VPS11	pfam_VPS11_C,pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_RING,pirsf_VPS11,pfscan_Znf_RING	-	no_errors	VPS11	HGNC	ENSG00000160695				27	0	0	14	11	44
THY1	0	genome.wustl.edu	37	11	119291018	119291018	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	119291018	119291018	C	T	SNP	THY1	ENST00000284240	human	ensembl	74_37	-1	known	missense	c.116	p.R39H	1.000	pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	THY1	HGNC	ENSG00000154096				127	0	0	85	27	24.1071
TRIM29	0	genome.wustl.edu	37	11	119991317	119991317	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	119991317	119991317	T	C	SNP	TRIM29	ENST00000341846	human	ensembl	74_37	-1	known	missense	c.1492	p.T498A	0.998	NULL	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	-	no_errors	TRIM29	HGNC	ENSG00000137699				47	0	0	31	5	13.8889
TECTA	0	genome.wustl.edu	37	11	121016689	121016689	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	121016689	121016689	C	T	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	silent	c.3969	p.F1323	1.000	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927				221	0	0	165	18	9.83607
TECTA	0	genome.wustl.edu	37	11	121037313	121037313	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	121037313	121037313	G	T	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	missense	c.5410	p.V1804L	1.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927				121	0	0	79	25	24.0385
SORL1	0	genome.wustl.edu	37	11	121403215	121403215	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	121403215	121403215	G	A	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.1639	p.G547R	1.000	smart_VPS10	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642				66	0	0	53	5	8.62069
SORL1	0	genome.wustl.edu	37	11	121477994	121477994	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	121477994	121477994	G	A	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.5161	p.V1721I	0.164	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642				48	0	0	20	7	25.9259
MUC5B	0	genome.wustl.edu	37	11	1258327	1258327	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	1258327	1258327	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.3239	p.R1080H	1.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				83	0	0	34	2	5.55556
CDON	0	genome.wustl.edu	37	11	125873845	125873845	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	125873845	125873845	C	T	SNP	CDON	ENST00000392693	human	ensembl	74_37	-1	known	missense	c.1978	p.A660T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CDON	HGNC	ENSG00000064309				81	0	0	63	5	7.35294
SRPR	0	genome.wustl.edu	37	11	126135224	126135224	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	126135224	126135224	C	T	SNP	SRPR	ENST00000332118	human	ensembl	74_37	-1	known	missense	c.1250	p.R417H	1.000	pfam_ArgK,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Sig_recog_particle_rcpt_asu_N,pfam_SRP54_GTPase_dom,pfam_ArgK,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_Signal_recog_particl_SRP54_hlx,superfamily_Longin-like_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom	-	no_errors	SRPR	HGNC	ENSG00000182934				99	0	0	41	16	28.0702
MUC5B	0	genome.wustl.edu	37	11	1271490	1271490	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	1271490	1271490	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.13389	p.T4463	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				181	0	0	117	17	12.6866
NTM	0	genome.wustl.edu	37	11	132180070	132180070	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	132180070	132180070	G	A	SNP	NTM	ENST00000539799	human	ensembl	74_37	+1	known	silent	c.726	p.Q242	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NTM	HGNC	ENSG00000182667				227	0	0	147	49	25
SPON1	0	genome.wustl.edu	37	11	14156978	14156978	+	RNA	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	14156978	14156978	A	G	SNP	SPON1	ENST00000310358	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SPON1	HGNC	ENSG00000152268				121	0	0	96	8	7.69231
RRAS2	0	genome.wustl.edu	37	11	14316397	14316397	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	14316397	14316397	C	T	SNP	RRAS2	ENST00000545643	human	ensembl	74_37	-1	known	missense	c.226	p.A76T	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RRAS2	HGNC	ENSG00000133818				129	0	0	94	21	18.2609
PDE3B	0	genome.wustl.edu	37	11	14665715	14665715	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	14665715	14665715	G	A	SNP	PDE3B	ENST00000282096	human	ensembl	74_37	+1	known	missense	c.94	p.V32M	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3B	HGNC	ENSG00000152270				28	0	0	19	3	13.6364
PDE3B	0	genome.wustl.edu	37	11	14880640	14880640	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	14880640	14880640	G	A	SNP	PDE3B	ENST00000282096	human	ensembl	74_37	+1	known	missense	c.2572	p.A858T	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3B	HGNC	ENSG00000152270				109	0	0	85	7	7.6087
PIK3C2A	0	genome.wustl.edu	37	11	17115867	17115867	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	17115867	17115867	G	A	SNP	PIK3C2A	ENST00000265970	human	ensembl	74_37	-1	known	silent	c.4392	p.D1464	0.998	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2A	HGNC	ENSG00000011405				37	0	0	30	8	21.0526
CTSD	0	genome.wustl.edu	37	11	1778684	1778684	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	1778684	1778684	C	T	SNP	CTSD	ENST00000236671	human	ensembl	74_37	-1	known	missense	c.574	p.A192T	1.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	CTSD	HGNC	ENSG00000117984				49	0	0	40	5	11.1111
SPTY2D1	0	genome.wustl.edu	37	11	18633956	18633956	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	18633956	18633956	G	A	SNP	SPTY2D1	ENST00000336349	human	ensembl	74_37	-1	known	silent	c.1791	p.Y597	0.996	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	-	no_errors	SPTY2D1	HGNC	ENSG00000179119				92	0	0	56	9	13.8462
E2F8	0	genome.wustl.edu	37	11	19247354	19247354	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	19247354	19247354	C	A	SNP	E2F8	ENST00000250024	human	ensembl	74_37	-1	known	nonsense	c.1951	p.E651*	1.000	NULL	pfam_E2F_TDP	-	no_errors	E2F8	HGNC	ENSG00000129173				312	0	0	197	36	15.4506
NAV2	0	genome.wustl.edu	37	11	19955143	19955143	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	19955143	19955143	C	T	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	silent	c.1422	p.T474	0.000	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833				118	0	0	83	5	5.68182
IGF2	0	genome.wustl.edu	37	11	2156625	2156625	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	2156625	2156625	G	A	SNP	IGF2	ENST00000434045	human	ensembl	74_37	-1	known	silent	c.297	p.F99	0.994	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Insulin_family,prints_Insulin-like_growth_factor	pfam_IGF2_C,pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_IGF2,prints_Insulin_family,prints_Insulin-like_growth_factor	-	no_errors	IGF2	HGNC	ENSG00000167244				39	0	0	26	7	21.2121
SLC5A12	0	genome.wustl.edu	37	11	26743064	26743064	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	26743064	26743064	C	A	SNP	SLC5A12	ENST00000396005	human	ensembl	74_37	-1	known	silent	c.198	p.T66	0.784	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A12	HGNC	ENSG00000148942				80	0	0	49	14	22.2222
NAT10	0	genome.wustl.edu	37	11	34165024	34165024	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	34165024	34165024	A	G	SNP	NAT10	ENST00000257829	human	ensembl	74_37	+1	known	missense	c.2918	p.N973S	1.000	NULL	pfam_Helicase_dom,pfam_DUF1726,superfamily_Acyl_CoA_acyltransferase,superfamily_P-loop_NTPase,pfscan_GNAT_dom	-	no_errors	NAT10	HGNC	ENSG00000135372				41	0	0	23	9	28.125
FJX1	0	genome.wustl.edu	37	11	35641134	35641134	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	35641134	35641134	G	A	SNP	FJX1	ENST00000317811	human	ensembl	74_37	+1	known	missense	c.950	p.R317H	1.000	pfam_DUF1193	pfam_DUF1193	-	no_errors	FJX1	HGNC	ENSG00000179431				62	0	0	46	7	13.2075
TRAF6	0	genome.wustl.edu	37	11	36511400	36511400	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	36511400	36511400	A	G	SNP	TRAF6	ENST00000348124	human	ensembl	74_37	-1	known	silent	c.1557	p.D519	0.886	NULL	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF6	HGNC	ENSG00000175104				205	0	0	150	30	16.6667
OR52K2	0	genome.wustl.edu	37	11	4471014	4471014	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	4471014	4471014	G	A	SNP	OR52K2	ENST00000325719	human	ensembl	74_37	+1	known	missense	c.445	p.A149T	0.057	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52K2	HGNC	ENSG00000181963				136	0	0	89	23	20.5357
F2	0	genome.wustl.edu	37	11	46747450	46747450	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	46747450	46747450	G	T	SNP	F2	ENST00000311907	human	ensembl	74_37	+1	known	missense	c.601	p.G201C	0.000	pirsf_Prothrombin/thrombin	pfam_Peptidase_S1,pfam_Kringle,pfam_Thrombin_light_chain,pfam_GLA_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,superfamily_GLA_domain,smart_GLA_domain,smart_Kringle,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_GLA_domain,pfscan_Kringle,pfscan_Peptidase_S1,prints_Prothrombin/thrombin,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F2	HGNC	ENSG00000180210				151	0	0	127	22	14.7651
MADD	0	genome.wustl.edu	37	11	47311500	47311500	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	47311500	47311500	C	T	SNP	MADD	ENST00000311027	human	ensembl	74_37	+1	known	missense	c.2899	p.R967C	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514				68	0	0	41	9	18
PTPRJ	0	genome.wustl.edu	37	11	48166268	48166268	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	48166268	48166268	G	A	SNP	PTPRJ	ENST00000418331	human	ensembl	74_37	+1	known	missense	c.2617	p.D873N	0.980	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRJ	HGNC	ENSG00000149177				92	0	0	45	11	19.6429
OR4C12	0	genome.wustl.edu	37	11	50003327	50003327	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	50003327	50003327	G	T	SNP	OR4C12	ENST00000335238	human	ensembl	74_37	-1	known	silent	c.711	p.T237	0.999	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR4C12	HGNC	ENSG00000221954				69	0	0	52	14	21.2121
OR51B5	0	genome.wustl.edu	37	11	5364477	5364477	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	5364477	5364477	G	A	SNP	OR51B5	ENST00000300773	human	ensembl	74_37	-1	known	missense	c.278	p.A93V	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51B5	HGNC	ENSG00000242180				76	0	0	61	5	7.57576
TRIM48	0	genome.wustl.edu	37	11	55035844	55035844	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	55035844	55035844	T	C	SNP	TRIM48	ENST00000417545	human	ensembl	74_37	+1	known	missense	c.574	p.Y192H	0.183	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM48	HGNC	ENSG00000150244				96	0	0	82	14	14.5833
TRIM51HP	0	genome.wustl.edu	37	11	55065040	55065040	+	RNA	SNP	T	T	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	55065040	55065040	T	A	SNP	TRIM51HP	ENST00000526016	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.004	-	-	-	no_errors	TRIM51HP	HGNC	ENSG00000166007				61	0	0	35	12	25.5319
OR4C16	0	genome.wustl.edu	37	11	55339694	55339694	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	55339694	55339694	C	T	SNP	OR4C16	ENST00000314634	human	ensembl	74_37	+1	known	missense	c.91	p.R31C	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C16	HGNC	ENSG00000181935				149	0	0	87	16	15.534
OR8I2	0	genome.wustl.edu	37	11	55860792	55860792	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	55860792	55860792	C	T	SNP	OR8I2	ENST00000302124	human	ensembl	74_37	+1	known	silent	c.9	p.G3	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8I2	HGNC	ENSG00000172154				113	0	0	90	7	7.21649
OR52B6	0	genome.wustl.edu	37	11	5602471	5602471	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	5602471	5602471	T	G	SNP	OR52B6	ENST00000345043	human	ensembl	74_37	+1	known	missense	c.365	p.F122C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52B6	HGNC	ENSG00000187747				108	0	0	77	18	18.9474
OR8J1	0	genome.wustl.edu	37	11	56128400	56128400	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	56128400	56128400	A	G	SNP	OR8J1	ENST00000303039	human	ensembl	74_37	+1	known	silent	c.678	p.L226	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J1	HGNC	ENSG00000172487				81	0	0	47	12	20.339
TRIM6	0	genome.wustl.edu	37	11	5632626	5632626	+	RNA	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	5632626	5632626	G	T	SNP	TRIM6	ENST00000481603	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TRIM6	HGNC	ENSG00000121236				64	0	0	41	12	22.6415
OR5AR1	0	genome.wustl.edu	37	11	56431207	56431207	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	56431207	56431207	G	T	SNP	OR5AR1	ENST00000302969	human	ensembl	74_37	+1	known	missense	c.46	p.G16C	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AR1	HGNC	ENSG00000172459				199	0	0	144	32	18.1818
OR5AR1	0	genome.wustl.edu	37	11	56431861	56431861	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	56431861	56431861	C	T	SNP	OR5AR1	ENST00000302969	human	ensembl	74_37	+1	known	missense	c.700	p.R234C	0.007	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AR1	HGNC	ENSG00000172459				116	0	0	88	21	19.2661
P2RX3	0	genome.wustl.edu	37	11	57135559	57135559	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	57135559	57135559	G	A	SNP	P2RX3	ENST00000263314	human	ensembl	74_37	+1	known	missense	c.919	p.V307M	0.999	pfam_P2X_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X3_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX3	HGNC	ENSG00000109991				72	0	0	46	19	29.2308
RTN4RL2	0	genome.wustl.edu	37	11	57243698	57243698	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	57243698	57243698	C	T	SNP	RTN4RL2	ENST00000335099	human	ensembl	74_37	+1	known	silent	c.577	p.L193	0.998	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	RTN4RL2	HGNC	ENSG00000186907				139	0	0	102	11	9.73451
OR5B21	0	genome.wustl.edu	37	11	58275342	58275342	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	58275342	58275342	C	T	SNP	OR5B21	ENST00000360374	human	ensembl	74_37	-1	known	silent	c.237	p.T79	0.374	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5B21	HGNC	ENSG00000198283				63	0	0	37	9	19.5652
TMEM109	0	genome.wustl.edu	37	11	60689494	60689494	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	60689494	60689494	G	A	SNP	TMEM109	ENST00000227525	human	ensembl	74_37	+1	known	missense	c.589	p.A197T	0.998	NULL	NULL	-	no_errors	TMEM109	HGNC	ENSG00000110108				118	0	0	57	15	20.8333
DAGLA	0	genome.wustl.edu	37	11	61498870	61498870	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	61498870	61498870	C	T	SNP	DAGLA	ENST00000257215	human	ensembl	74_37	+1	known	missense	c.931	p.R311W	1.000	NULL	pfam_Lipase_3	-	no_errors	DAGLA	HGNC	ENSG00000134780				172	1	0.578035	151	8	5.03145
INCENP	0	genome.wustl.edu	37	11	61916012	61916012	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	61916012	61916012	G	A	SNP	INCENP	ENST00000394818	human	ensembl	74_37	+1	known	missense	c.2269	p.E757K	1.000	NULL	pfam_INCENP_N,pfam_Inner_centromere_prot_ARK-bd	-	no_errors	INCENP	HGNC	ENSG00000149503				16	0	0	19	3	13.6364
AHNAK	0	genome.wustl.edu	37	11	62290571	62290571	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	62290571	62290571	T	C	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	missense	c.11318	p.D3773G	0.972	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942				262	0	0	203	20	8.96861
AHNAK	0	genome.wustl.edu	37	11	62290971	62290971	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	62290971	62290971	C	T	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	missense	c.10918	p.V3640I	1.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942				341	0	0	255	14	5.20446
EEF1G	0	genome.wustl.edu	37	11	62327804	62327804	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	62327804	62327804	C	T	SNP	EEF1G	ENST00000378019	human	ensembl	74_37	-1	known	missense	c.1130	p.R377H	1.000	pfam_Transl_elong_EF1_G_con,superfamily_Transl_elong_EF1_G_con,pfscan_Transl_elong_EF1_G_con	pfam_Transl_elong_EF1_G_con,pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Transl_elong_EF1_G_con,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,pfscan_Transl_elong_EF1_G_con	-	no_errors	EEF1G	HGNC	ENSG00000254772				28	0	0	14	8	36.3636
ROM1	0	genome.wustl.edu	37	11	62381147	62381147	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	62381147	62381147	G	A	SNP	ROM1	ENST00000278833	human	ensembl	74_37	+1	known	missense	c.394	p.A132T	0.850	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Peripherin/rom-1	-	no_errors	ROM1	HGNC	ENSG00000149489				83	0	0	48	13	21.3115
GANAB	0	genome.wustl.edu	37	11	62397734	62397734	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	62397734	62397734	G	T	SNP	GANAB	ENST00000346178	human	ensembl	74_37	-1	known	missense	c.1594	p.P532T	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom	-	no_errors	GANAB	HGNC	ENSG00000089597				33	0	0	18	2	10
CNGA4	0	genome.wustl.edu	37	11	6265356	6265356	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	6265356	6265356	C	G	SNP	CNGA4	ENST00000379936	human	ensembl	74_37	+1	known	missense	c.1445	p.A482G	0.729	NULL	pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA4	HGNC	ENSG00000132259				100	0	0	50	18	26.4706
OTUB1	0	genome.wustl.edu	37	11	63764653	63764653	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	63764653	63764653	C	T	SNP	OTUB1	ENST00000422031	human	ensembl	74_37	+1	known	silent	c.666	p.R222	0.006	pfam_Peptidase_C65_otubain,pfam_OTU,pirsf_Ubiquitin_thioesterase_Otubain,pfscan_OTU	pfam_Peptidase_C65_otubain,pfam_OTU,pirsf_Ubiquitin_thioesterase_Otubain,pfscan_OTU	-	no_errors	OTUB1	HGNC	ENSG00000167770				198	0	0	153	13	7.83133
PYGM	0	genome.wustl.edu	37	11	64522266	64522266	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	64522266	64522266	C	T	SNP	PYGM	ENST00000164139	human	ensembl	74_37	-1	known	missense	c.898	p.V300M	1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGM	HGNC	ENSG00000068976				43	0	0	28	11	28.2051
SPDYC	0	genome.wustl.edu	37	11	64940678	64940678	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	64940678	64940678	C	A	SNP	SPDYC	ENST00000377185	human	ensembl	74_37	+1	known	missense	c.872	p.P291H	0.005	NULL	pfam_Cell_cycle_regulatory_Spy1	-	no_errors	SPDYC	HGNC	ENSG00000204710				80	0	0	62	9	12.6761
TIGD3	0	genome.wustl.edu	37	11	65124594	65124594	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	65124594	65124594	G	T	SNP	TIGD3	ENST00000309880	human	ensembl	74_37	+1	known	missense	c.1315	p.G439C	1.000	NULL	pfam_HTH_CenpB_DNA-bd_dom,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD3	HGNC	ENSG00000173825				118	0	0	84	8	8.69565
AP5B1	0	genome.wustl.edu	37	11	65547054	65547054	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	65547054	65547054	G	A	SNP	AP5B1	ENST00000532090	human	ensembl	74_37	-1	novel	missense	c.910	p.P304S	1.000	NULL	NULL	-	no_errors	AP5B1	HGNC	ENSG00000254470				37	0	0	15	4	21.0526
SF3B2	0	genome.wustl.edu	37	11	65826406	65826406	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	65826406	65826406	C	T	SNP	SF3B2	ENST00000322535	human	ensembl	74_37	+1	known	missense	c.1072	p.R358C	0.627	NULL	pfam_DUF382,pfam_PSP,pfam_SAP_dom,smart_SAP_dom,smart_PSP,pfscan_SAP_dom	-	no_errors	SF3B2	HGNC	ENSG00000087365				108	0	0	72	12	14.2857
CD248	0	genome.wustl.edu	37	11	66082358	66082358	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	66082358	66082358	C	G	SNP	CD248	ENST00000311330	human	ensembl	74_37	-1	known	missense	c.2141	p.G714A	1.000	NULL	pfam_C-type_lectin,pfam_EGF-like_Ca-bd_dom,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_C-type_lectin	-	no_errors	CD248	HGNC	ENSG00000174807				22	0	0	12	3	20
RBM4	0	genome.wustl.edu	37	11	66410970	66410970	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	66410970	66410970	C	T	SNP	RBM4	ENST00000310092	human	ensembl	74_37	+1	known	silent	c.462	p.P154	1.000	NULL	pfam_RRM_dom,pfam_Znf_CCHC,smart_RRM_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_RRM_dom	-	no_errors	RBM4	HGNC	ENSG00000173933				119	0	0	67	11	14.1026
ANKRD13D	0	genome.wustl.edu	37	11	67059639	67059639	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	67059639	67059639	T	C	SNP	ANKRD13D	ENST00000511455	human	ensembl	74_37	+1	known	missense	c.719	p.V240A	1.000	pfam_ANKRD13	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ubiquitin-int_motif,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif	-	no_errors	ANKRD13D	HGNC	ENSG00000172932				92	0	0	70	16	18.6047
PTPRCAP	0	genome.wustl.edu	37	11	67203227	67203227	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	67203227	67203227	C	A	SNP	PTPRCAP	ENST00000326294	human	ensembl	74_37	-1	known	missense	c.598	p.G200C	1.000	pirsf_Tyr_Pase_rcpt_C-assoc_CD45-AP	pirsf_Tyr_Pase_rcpt_C-assoc_CD45-AP	-	no_errors	PTPRCAP	HGNC	ENSG00000213402				45	0	0	30	5	14.2857
IGHMBP2	0	genome.wustl.edu	37	11	68675625	68675625	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	68675625	68675625	G	A	SNP	IGHMBP2	ENST00000255078	human	ensembl	74_37	+1	known	missense	c.269	p.G90D	1.000	tigrfam_DNA_helicase_put	pfam_R3H_ss-bd,pfam_Znf_AN1,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_R3H_ss-bd,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_R3H_ss-bd,tigrfam_DNA_helicase_put	-	no_errors	IGHMBP2	HGNC	ENSG00000132740				216	0	0	177	19	9.69388
IGHMBP2	0	genome.wustl.edu	37	11	68679004	68679004	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	68679004	68679004	C	A	SNP	IGHMBP2	ENST00000255078	human	ensembl	74_37	+1	known	missense	c.644	p.P215H	1.000	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,tigrfam_DNA_helicase_put	pfam_R3H_ss-bd,pfam_Znf_AN1,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_R3H_ss-bd,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_R3H_ss-bd,tigrfam_DNA_helicase_put	-	no_errors	IGHMBP2	HGNC	ENSG00000132740				102	0	0	70	7	9.09091
TPCN2	0	genome.wustl.edu	37	11	68854605	68854605	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	68854605	68854605	G	A	SNP	TPCN2	ENST00000294309	human	ensembl	74_37	+1	known	missense	c.2111	p.R704H	0.534	NULL	pfam_Ion_trans_dom	-	no_errors	TPCN2	HGNC	ENSG00000162341				71	0	0	47	5	9.61538
OR10A4	0	genome.wustl.edu	37	11	6898745	6898745	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	6898745	6898745	C	T	SNP	OR10A4	ENST00000379829	human	ensembl	74_37	+1	known	silent	c.867	p.I289	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A4	HGNC	ENSG00000170782				183	0	0	114	19	14.2857
ANO1	0	genome.wustl.edu	37	11	70007369	70007369	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	70007369	70007369	C	T	SNP	ANO1	ENST00000355303	human	ensembl	74_37	+1	known	missense	c.1681	p.R561W	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO1	HGNC	ENSG00000131620				97	0	0	76	9	10.5882
SHANK2	0	genome.wustl.edu	37	11	70319246	70319246	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	70319246	70319246	G	A	SNP	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	missense	c.5281	p.R1761C	0.987	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105				158	0	0	89	24	21.2389
KRTAP5-8	0	genome.wustl.edu	37	11	71249434	71249434	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	71249434	71249434	A	G	SNP	KRTAP5-8	ENST00000398534	human	ensembl	74_37	+1	known	silent	c.333	p.K111	0.000	NULL	NULL	-	no_errors	KRTAP5-8	HGNC	ENSG00000241233				450	1	0.221729	240	18	6.97674
DEFB108B	0	genome.wustl.edu	37	11	71548614	71548614	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	71548614	71548614	G	A	SNP	DEFB108B	ENST00000529157	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	DEFB108B	HGNC	ENSG00000184276				140	0	0	103	16	13.4454
ARHGEF17	0	genome.wustl.edu	37	11	73068356	73068356	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	73068356	73068356	C	T	SNP	ARHGEF17	ENST00000263674	human	ensembl	74_37	+1	known	silent	c.4071	p.D1357	0.273	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,superfamily_Vinculin/catenin,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF17	HGNC	ENSG00000110237				48	0	0	18	4	18.1818
OR5P3	0	genome.wustl.edu	37	11	7847470	7847470	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	7847470	7847470	A	G	SNP	OR5P3	ENST00000328375	human	ensembl	74_37	-1	known	missense	c.50	p.L17S	0.025	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5P3	HGNC	ENSG00000182334				74	0	0	47	11	18.9655
SYTL2	0	genome.wustl.edu	37	11	85445200	85445200	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	85445200	85445200	G	A	SNP	SYTL2	ENST00000316356	human	ensembl	74_37	-1	known	missense	c.1172	p.S391L	0.000	NULL	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL2	HGNC	ENSG00000137501				162	0	0	105	17	13.9344
ST5	0	genome.wustl.edu	37	11	8752324	8752324	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	8752324	8752324	C	T	SNP	ST5	ENST00000313726	human	ensembl	74_37	-1	known	nonsense	c.513	p.W171*	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	ST5	HGNC	ENSG00000166444				84	0	0	51	9	15
ST5	0	genome.wustl.edu	37	11	8752514	8752514	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	8752514	8752514	G	A	SNP	ST5	ENST00000313726	human	ensembl	74_37	-1	known	missense	c.323	p.A108V	0.784	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	ST5	HGNC	ENSG00000166444				149	0	0	108	10	8.47458
GRM5	0	genome.wustl.edu	37	11	88386441	88386441	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	88386441	88386441	T	G	SNP	GRM5	ENST00000305447	human	ensembl	74_37	-1	known	missense	c.1042	p.T348P	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_5,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_1,pfscan_GPCR_3_C	-	no_errors	GRM5	HGNC	ENSG00000168959				101	0	0	69	11	13.75
ASCL3	0	genome.wustl.edu	37	11	8959358	8959358	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	8959358	8959358	G	T	SNP	ASCL3	ENST00000325884	human	ensembl	74_37	-1	known	silent	c.351	p.R117	0.014	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ASCL3	HGNC	ENSG00000176009				104	0	0	81	17	17.3469
MAML2	0	genome.wustl.edu	37	11	95712334	95712334	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	95712334	95712334	C	T	SNP	MAML2	ENST00000524717	human	ensembl	74_37	-1	known	silent	c.3249	p.T1083	0.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC	ENSG00000184384				86	0	0	59	9	13.2353
CNTN5	0	genome.wustl.edu	37	11	99827584	99827584	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	99827584	99827584	G	A	SNP	CNTN5	ENST00000279463	human	ensembl	74_37	+1	known	silent	c.720	p.A240	0.174	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN5	HGNC	ENSG00000149972				102	1	0.970874	62	16	20.5128
CLEC12A	0	genome.wustl.edu	37	12	10137481	10137481	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	10137481	10137481	C	T	SNP	CLEC12A	ENST00000355690	human	ensembl	74_37	+1	known	silent	c.684	p.N228	0.001	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC12A	HGNC	ENSG00000172322				22	0	0	16	4	20
SLC5A8	0	genome.wustl.edu	37	12	101581230	101581230	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	101581230	101581230	G	A	SNP	SLC5A8	ENST00000536262	human	ensembl	74_37	-1	known	silent	c.897	p.L299	0.880	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A8	HGNC	ENSG00000256870				76	0	0	64	5	7.24638
IGF1	0	genome.wustl.edu	37	12	102811676	102811676	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	102811676	102811676	G	T	SNP	IGF1	ENST00000307046	human	ensembl	74_37	-1	known	missense	c.508	p.Q170K	1.000	NULL	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_IGF-I,prints_Insulin_family,prints_Insulin-like_growth_factor	-	no_errors	IGF1	HGNC	ENSG00000017427				471	0	0	321	37	10.3352
STAB2	0	genome.wustl.edu	37	12	104049047	104049047	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	104049047	104049047	C	T	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	silent	c.1570	p.L524	1.000	pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011				124	0	0	82	13	13.6842
EID3	0	genome.wustl.edu	37	12	104698101	104698101	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	104698101	104698101	A	T	SNP	EID3	ENST00000527879	human	ensembl	74_37	+1	known	missense	c.389	p.N130I	0.001	pfam_Nse4_C	pfam_Nse4_C	-	no_errors	EID3	HGNC	ENSG00000255150				295	0	0	212	38	15.2
CRY1	0	genome.wustl.edu	37	12	107393779	107393779	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	107393779	107393779	G	A	SNP	CRY1	ENST00000008527	human	ensembl	74_37	-1	known	nonsense	c.766	p.R256*	1.000	pfam_Photolyase_FAD-bd/Cryptochr_C,superfamily_Photolyase_FAD-bd/Cryptochr_C	pfam_Photolyase_FAD-bd/Cryptochr_C,pfam_DNA_photolyase_N,superfamily_Photolyase_FAD-bd/Cryptochr_C,superfamily_DNA_photolyase_N	-	no_errors	CRY1	HGNC	ENSG00000008405				69	0	0	43	7	14
SSH1	0	genome.wustl.edu	37	12	109210869	109210869	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	109210869	109210869	G	A	SNP	SSH1	ENST00000326495	human	ensembl	74_37	-1	known	missense	c.346	p.R116C	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH1	HGNC	ENSG00000084112				141	0	0	116	36	23.6842
ACACB	0	genome.wustl.edu	37	12	109704119	109704119	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	109704119	109704119	G	A	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	silent	c.7329	p.A2443	0.968	NULL	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555				82	0	0	47	21	30.8824
UBE3B	0	genome.wustl.edu	37	12	109948193	109948193	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	109948193	109948193	G	A	SNP	UBE3B	ENST00000342494	human	ensembl	74_37	+1	known	missense	c.1786	p.G596R	1.000	NULL	pfam_HECT,pfam_IQ_motif_EF-hand-BS,superfamily_HECT,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3B	HGNC	ENSG00000151148				30	0	0	24	11	31.4286
ATP2A2	0	genome.wustl.edu	37	12	110770466	110770466	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	110770466	110770466	C	T	SNP	ATP2A2	ENST00000539276	human	ensembl	74_37	+1	known	missense	c.1160	p.S387L	1.000	superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A2	HGNC	ENSG00000174437				198	0	0	155	39	20.1031
PPP1CC	0	genome.wustl.edu	37	12	111168366	111168366	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	111168366	111168366	C	T	SNP	PPP1CC	ENST00000340766	human	ensembl	74_37	-1	known	missense	c.386	p.S129N	1.000	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP1CC	HGNC	ENSG00000186298				91	0	0	89	5	5.31915
CUX2	0	genome.wustl.edu	37	12	111758403	111758403	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	111758403	111758403	C	T	SNP	CUX2	ENST00000261726	human	ensembl	74_37	+1	known	missense	c.2590	p.R864W	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_Prefoldin,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX2	HGNC	ENSG00000111249				20	0	0	6	4	40
CUX2	0	genome.wustl.edu	37	12	111785628	111785628	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	111785628	111785628	G	A	SNP	CUX2	ENST00000261726	human	ensembl	74_37	+1	known	silent	c.3960	p.E1320	0.488	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_Prefoldin,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX2	HGNC	ENSG00000111249				125	1	0.793651	77	18	18.9474
CCDC60	0	genome.wustl.edu	37	12	119773055	119773055	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	119773055	119773055	C	T	SNP	CCDC60	ENST00000327554	human	ensembl	74_37	+1	known	missense	c.74	p.S25L	0.019	NULL	NULL	-	no_errors	CCDC60	HGNC	ENSG00000183273				150	0	0	117	8	6.4
RAB35	0	genome.wustl.edu	37	12	120546244	120546244	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	120546244	120546244	C	T	SNP	RAB35	ENST00000229340	human	ensembl	74_37	-1	known	missense	c.80	p.R27H	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB35	HGNC	ENSG00000111737				83	0	0	46	10	17.8571
CABP1	0	genome.wustl.edu	37	12	121093979	121093979	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	121093979	121093979	G	A	SNP	CABP1	ENST00000288616	human	ensembl	74_37	+1	known	silent	c.129	p.P43	0.929	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP1	HGNC	ENSG00000157782				63	0	0	32	5	13.5135
MORN3	0	genome.wustl.edu	37	12	122107269	122107269	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	122107269	122107269	C	T	SNP	MORN3	ENST00000355329	human	ensembl	74_37	-1	known	missense	c.121	p.E41K	1.000	pfam_MORN,smart_MORN	pfam_MORN,smart_MORN	-	no_errors	MORN3	HGNC	ENSG00000139714				151	0	0	114	23	16.7883
GLT1D1	0	genome.wustl.edu	37	12	129442187	129442187	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	129442187	129442187	A	G	SNP	GLT1D1	ENST00000442111	human	ensembl	74_37	+1	known	missense	c.878	p.Q293R	1.000	pfam_Glyco_trans_1	pfam_Glyco_trans_1	-	no_errors	GLT1D1	HGNC	ENSG00000151948				58	0	0	30	12	28.5714
ULK1	0	genome.wustl.edu	37	12	132405879	132405879	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	132405879	132405879	G	A	SNP	ULK1	ENST00000321867	human	ensembl	74_37	+1	known	silent	c.3126	p.S1042	0.042	pfam_Ser/Thr_kinase_C,pirsf_Ser/Thr_kin_STPK_Ulk-1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ser/Thr_kinase_C,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK1	HGNC	ENSG00000177169				231	0	0	189	26	12.093
PUS1	0	genome.wustl.edu	37	12	132426054	132426054	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	132426054	132426054	G	A	SNP	PUS1	ENST00000376649	human	ensembl	74_37	+1	known	silent	c.762	p.P254	0.000	pfam_PsdUridine_synth_TruA_a/b_dom,superfamily_PsdUridine_synth_cat_dom,tigrfam_PsdUridine_synth_TruA	pfam_PsdUridine_synth_TruA_a/b_dom,superfamily_PsdUridine_synth_cat_dom,tigrfam_PsdUridine_synth_TruA	-	no_errors	PUS1	HGNC	ENSG00000177192				104	0	0	54	20	27.027
NOC4L	0	genome.wustl.edu	37	12	132632289	132632289	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	132632289	132632289	G	A	SNP	NOC4L	ENST00000330579	human	ensembl	74_37	+1	known	missense	c.565	p.V189M	0.000	superfamily_ARM-type_fold	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	NOC4L	HGNC	ENSG00000184967				144	0	0	97	9	8.49057
PLEKHA5	0	genome.wustl.edu	37	12	19522684	19522684	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	19522684	19522684	C	T	SNP	PLEKHA5	ENST00000317589	human	ensembl	74_37	+1	known	missense	c.3503	p.P1168L	0.991	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126				65	0	0	69	12	14.8148
SLCO1B1	0	genome.wustl.edu	37	12	21325632	21325632	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	21325632	21325632	G	A	SNP	SLCO1B1	ENST00000256958	human	ensembl	74_37	+1	known	missense	c.133	p.A45T	0.100	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B1	HGNC	ENSG00000134538				84	0	0	58	21	26.5823
PYROXD1	0	genome.wustl.edu	37	12	21602582	21602582	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	21602582	21602582	G	A	SNP	PYROXD1	ENST00000240651	human	ensembl	74_37	+1	known	missense	c.371	p.G124E	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_FAD_pyr_nucl-diS_OxRdtase	-	no_errors	PYROXD1	HGNC	ENSG00000121350				33	0	0	35	7	16.6667
ASUN	0	genome.wustl.edu	37	12	27075620	27075620	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	27075620	27075620	G	A	SNP	ASUN	ENST00000261191	human	ensembl	74_37	-1	known	missense	c.818	p.A273V	1.000	pfam_Cell_cycle_regulator_Mat89Bb	pfam_Cell_cycle_regulator_Mat89Bb	-	no_errors	ASUN	HGNC	ENSG00000064102				70	0	0	41	7	14.5833
CNTN1	0	genome.wustl.edu	37	12	41327522	41327522	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	41327522	41327522	G	A	SNP	CNTN1	ENST00000347616	human	ensembl	74_37	+1	known	missense	c.827	p.R276Q	1.000	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN1	HGNC	ENSG00000018236				111	0	0	90	7	7.21649
PDZRN4	0	genome.wustl.edu	37	12	41961668	41961668	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	41961668	41961668	A	C	SNP	PDZRN4	ENST00000402685	human	ensembl	74_37	+1	known	missense	c.1551	p.E517D	1.000	NULL	pfam_PDZ,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	PDZRN4	HGNC	ENSG00000165966				88	0	0	71	5	6.57895
ADAMTS20	0	genome.wustl.edu	37	12	43777488	43777488	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	43777488	43777488	T	G	SNP	ADAMTS20	ENST00000389420	human	ensembl	74_37	-1	known	missense	c.4670	p.E1557A	0.985	NULL	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157				50	0	0	35	4	10.2564
ANO6	0	genome.wustl.edu	37	12	45822891	45822891	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	45822891	45822891	G	A	SNP	ANO6	ENST00000320560	human	ensembl	74_37	+1	known	missense	c.2530	p.V844I	0.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO6	HGNC	ENSG00000177119				59	0	0	32	5	13.5135
C12orf4	0	genome.wustl.edu	37	12	4627343	4627343	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	4627343	4627343	T	C	SNP	C12orf4	ENST00000261250	human	ensembl	74_37	-1	known	missense	c.914	p.H305R	0.996	pfam_DUF2362	pfam_DUF2362	-	no_errors	C12orf4	HGNC	ENSG00000047621				154	0	0	99	9	8.33333
GALNT8	0	genome.wustl.edu	37	12	4855350	4855350	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	4855350	4855350	T	C	SNP	GALNT8	ENST00000252318	human	ensembl	74_37	+1	known	missense	c.1099	p.F367L	0.989	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT8	HGNC	ENSG00000130035				117	0	0	80	18	18.3673
KMT2D	0	genome.wustl.edu	37	12	49420273	49420273	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	49420273	49420273	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.15476	p.R5159Q	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				90	0	0	52	13	20
KMT2D	0	genome.wustl.edu	37	12	49440450	49440450	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	49440450	49440450	T	C	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.4360	p.T1454A	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				167	0	0	82	38	31.6667
TUBA1A	0	genome.wustl.edu	37	12	49579153	49579153	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	49579153	49579153	A	G	SNP	TUBA1A	ENST00000301071	human	ensembl	74_37	-1	known	silent	c.996	p.I332	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA1A	HGNC	ENSG00000167552				134	0	0	86	22	20.3704
TROAP	0	genome.wustl.edu	37	12	49719360	49719360	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	49719360	49719360	C	A	SNP	TROAP	ENST00000257909	human	ensembl	74_37	+1	known	missense	c.414	p.S138R	0.940	NULL	NULL	-	no_errors	TROAP	HGNC	ENSG00000135451				94	0	0	76	7	8.43373
MCRS1	0	genome.wustl.edu	37	12	49953241	49953241	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	49953241	49953241	G	A	SNP	MCRS1	ENST00000357123	human	ensembl	74_37	-1	known	missense	c.1120	p.R374C	0.070	superfamily_SMAD_FHA_domain	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MCRS1	HGNC	ENSG00000187778				103	0	0	59	13	18.0556
PRPF40B	0	genome.wustl.edu	37	12	50029242	50029242	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	50029242	50029242	G	A	SNP	PRPF40B	ENST00000548825	human	ensembl	74_37	+1	known	missense	c.1261	p.A421T	1.000	superfamily_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	PRPF40B	HGNC	ENSG00000110844				135	0	0	92	20	17.8571
KCNA5	0	genome.wustl.edu	37	12	5154557	5154557	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	5154557	5154557	G	A	SNP	KCNA5	ENST00000252321	human	ensembl	74_37	+1	known	missense	c.1244	p.R415H	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_K_chnl,prints_K_chnl_volt-dep_Kv	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.5,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA5	HGNC	ENSG00000130037				60	0	0	45	3	6.25
CELA1	0	genome.wustl.edu	37	12	51723605	51723605	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	51723605	51723605	C	T	SNP	CELA1	ENST00000293636	human	ensembl	74_37	-1	known	missense	c.622	p.G208S	0.991	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA1	HGNC	ENSG00000139610				184	0	0	106	32	23.1884
KRT86	0	genome.wustl.edu	37	12	52695706	52695706	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	52695706	52695706	T	C	SNP	KRT86	ENST00000293525	human	ensembl	74_37	+1	known	silent	c.6	p.T2	0.937	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT86	HGNC	ENSG00000170442				179	1	0.555556	158	11	6.50888
KRT6A	0	genome.wustl.edu	37	12	52885416	52885416	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	52885416	52885416	C	A	SNP	KRT6A	ENST00000330722	human	ensembl	74_37	-1	known	missense	c.645	p.E215D	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6A	HGNC	ENSG00000205420				177	0	0	95	35	26.9231
CSAD	0	genome.wustl.edu	37	12	53554091	53554091	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	53554091	53554091	G	A	SNP	CSAD	ENST00000267085	human	ensembl	74_37	-1	known	missense	c.1060	p.R354C	0.969	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,pfam_Aminotrans_V/Cys_dSase,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	CSAD	HGNC	ENSG00000139631				94	0	0	72	7	8.86076
ESPL1	0	genome.wustl.edu	37	12	53677280	53677280	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	53677280	53677280	T	C	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	missense	c.3035	p.L1012S	1.000	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476				225	0	0	165	11	6.25
HNRNPA1	0	genome.wustl.edu	37	12	54676226	54676226	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	54676226	54676226	C	A	SNP	HNRNPA1	ENST00000340913	human	ensembl	74_37	+1	known	missense	c.539	p.A180D	1.000	pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPA1	HGNC	ENSG00000135486				56	0	0	46	16	25.8065
BLOC1S1	0	genome.wustl.edu	37	12	56113373	56113373	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	56113373	56113373	C	T	SNP	BLOC1S1	ENST00000548925	human	ensembl	74_37	+1	known	silent	c.442	p.L148	1.000	pfam_GCN5L1	pfam_GCN5L1	-	no_errors	BLOC1S1	HGNC	ENSG00000135441				77	0	0	52	18	25.7143
SLC39A5	0	genome.wustl.edu	37	12	56630453	56630453	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	56630453	56630453	A	G	SNP	SLC39A5	ENST00000266980	human	ensembl	74_37	+1	known	missense	c.1130	p.H377R	0.001	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A5	HGNC	ENSG00000139540				165	0	0	106	17	13.8211
BAZ2A	0	genome.wustl.edu	37	12	56994066	56994066	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	56994066	56994066	A	G	SNP	BAZ2A	ENST00000551812	human	ensembl	74_37	-1	known	missense	c.4817	p.L1606P	1.000	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,smart_Methyl_CpG_DNA-bd,smart_AT_hook_DNA-bd_motif,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2A	HGNC	ENSG00000076108				55	0	0	44	7	13.7255
GLI1	0	genome.wustl.edu	37	12	57864329	57864329	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	57864329	57864329	G	A	SNP	GLI1	ENST00000228682	human	ensembl	74_37	+1	known	silent	c.1806	p.S602	0.902	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI1	HGNC	ENSG00000111087				83	0	0	57	22	27.8481
AVIL	0	genome.wustl.edu	37	12	58201268	58201268	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	58201268	58201268	C	T	SNP	AVIL	ENST00000257861	human	ensembl	74_37	-1	known	missense	c.1337	p.R446H	1.000	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	AVIL	HGNC	ENSG00000135407				115	0	0	96	7	6.79612
AVPR1A	0	genome.wustl.edu	37	12	63543909	63543909	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	63543909	63543909	G	A	SNP	AVPR1A	ENST00000299178	human	ensembl	74_37	-1	known	silent	c.708	p.Y236	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_DUF1856,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_V1A_rcpt,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	-	no_errors	AVPR1A	HGNC	ENSG00000166148				202	1	0.492611	146	23	13.6095
TBK1	0	genome.wustl.edu	37	12	64854020	64854020	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	64854020	64854020	C	T	SNP	TBK1	ENST00000331710	human	ensembl	74_37	+1	known	missense	c.139	p.R47C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TBK1	HGNC	ENSG00000183735				60	0	0	67	4	5.6338
HELB	0	genome.wustl.edu	37	12	66725241	66725241	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	66725241	66725241	C	T	SNP	HELB	ENST00000247815	human	ensembl	74_37	+1	known	missense	c.2978	p.A993V	0.000	NULL	superfamily_P-loop_NTPase	-	no_errors	HELB	HGNC	ENSG00000127311				91	0	0	69	10	12.6582
RAP1B	0	genome.wustl.edu	37	12	69042518	69042518	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	69042518	69042518	A	G	SNP	RAP1B	ENST00000250559	human	ensembl	74_37	+1	known	missense	c.14	p.K5R	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAP1B	HGNC	ENSG00000127314				44	0	0	19	5	20.8333
GPR162	0	genome.wustl.edu	37	12	6936019	6936019	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	6936019	6936019	G	T	SNP	GPR162	ENST00000311268	human	ensembl	74_37	+1	known	missense	c.1417	p.G473C	0.999	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR162,prints_GCR_153/162	-	no_errors	GPR162	HGNC	ENSG00000250510				151	0	0	83	26	23.8532
TPI1	0	genome.wustl.edu	37	12	6979535	6979535	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	6979535	6979535	T	C	SNP	TPI1	ENST00000229270	human	ensembl	74_37	+1	known	silent	c.849	p.N283	0.997	superfamily_Triosephosphate_isomerase	pfam_Triosephosphate_isomerase,superfamily_Triosephosphate_isomerase,tigrfam_Triosephosphate_isomerase	-	no_errors	TPI1	HGNC	ENSG00000111669				74	0	0	51	5	8.92857
ZFC3H1	0	genome.wustl.edu	37	12	72026000	72026000	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	72026000	72026000	C	A	SNP	ZFC3H1	ENST00000378743	human	ensembl	74_37	-1	known	missense	c.3112	p.G1038C	1.000	NULL	pfam_Putative_zinc-finger_domain,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	ZFC3H1	HGNC	ENSG00000133858				200	0	0	150	23	13.2948
CD163L1	0	genome.wustl.edu	37	12	7548698	7548698	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	7548698	7548698	G	A	SNP	CD163L1	ENST00000313599	human	ensembl	74_37	-1	known	silent	c.2043	p.I681	0.999	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD163L1	HGNC	ENSG00000177675				33	0	0	39	4	9.30233
CD163L1	0	genome.wustl.edu	37	12	7556301	7556301	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	7556301	7556301	G	A	SNP	CD163L1	ENST00000313599	human	ensembl	74_37	-1	known	missense	c.1238	p.P413L	0.611	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD163L1	HGNC	ENSG00000177675				169	0	0	143	18	11.1801
E2F7	0	genome.wustl.edu	37	12	77444367	77444367	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	77444367	77444367	G	T	SNP	E2F7	ENST00000322886	human	ensembl	74_37	-1	known	missense	c.527	p.A176D	1.000	pfam_E2F_TDP	pfam_E2F_TDP	-	no_errors	E2F7	HGNC	ENSG00000165891				189	0	0	119	20	14.3885
SYT1	0	genome.wustl.edu	37	12	79685798	79685798	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	79685798	79685798	A	G	SNP	SYT1	ENST00000261205	human	ensembl	74_37	+1	known	missense	c.362	p.D121G	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT1	HGNC	ENSG00000067715				87	0	0	39	5	11.3636
MYF6	0	genome.wustl.edu	37	12	81102325	81102325	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	81102325	81102325	G	A	SNP	MYF6	ENST00000228641	human	ensembl	74_37	+1	known	missense	c.542	p.R181H	1.000	NULL	pfam_Basic,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYF6	HGNC	ENSG00000111046				141	1	0.704225	101	8	7.33945
A2M	0	genome.wustl.edu	37	12	9266084	9266084	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	9266084	9266084	A	G	SNP	A2M	ENST00000318602	human	ensembl	74_37	-1	known	missense	c.142	p.C48R	0.982	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,superfamily_Beta-lactam/transpept-like,superfamily_Cupredoxin	-	no_errors	A2M	HGNC	ENSG00000175899				176	0	0	113	24	17.5182
CRADD	0	genome.wustl.edu	37	12	94243943	94243943	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	94243943	94243943	C	T	SNP	CRADD	ENST00000332896	human	ensembl	74_37	+1	known	missense	c.496	p.R166C	0.789	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	pfam_CARD,pfam_Death_domain,superfamily_DEATH-like_dom,smart_CARD,smart_Death_domain,pfscan_CARD,pfscan_Death_domain	-	no_errors	CRADD	HGNC	ENSG00000169372				104	0	0	91	13	12.5
PLXNC1	0	genome.wustl.edu	37	12	94676091	94676091	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	94676091	94676091	C	T	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	nonsense	c.3793	p.R1265*	0.467	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040				122	0	0	85	17	16.6667
ZIC2	0	genome.wustl.edu	37	13	100634887	100634887	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	100634887	100634887	G	A	SNP	ZIC2	ENST00000376335	human	ensembl	74_37	+1	known	missense	c.569	p.R190H	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC2	HGNC	ENSG00000043355				26	0	0	10	5	33.3333
NALCN	0	genome.wustl.edu	37	13	101833511	101833511	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	101833511	101833511	G	T	SNP	NALCN	ENST00000376196	human	ensembl	74_37	-1	known	missense	c.1942	p.L648I	0.030	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				212	0	0	107	33	23.5714
NALCN	0	genome.wustl.edu	37	13	101881812	101881812	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	101881812	101881812	T	C	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.1558	p.M520V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				167	0	0	120	9	6.97674
NALCN	0	genome.wustl.edu	37	13	102029355	102029355	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	102029355	102029355	C	T	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.428	p.R143Q	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				57	0	0	41	5	10.8696
MYO16	0	genome.wustl.edu	37	13	109792877	109792877	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	109792877	109792877	G	A	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	silent	c.4251	p.G1417	0.712	NULL	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515				9	0	0	6	4	40
IRS2	0	genome.wustl.edu	37	13	110434417	110434417	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	110434417	110434417	G	A	SNP	IRS2	ENST00000375856	human	ensembl	74_37	-1	known	silent	c.3984	p.H1328	0.992	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS2	HGNC	ENSG00000185950				49	0	0	27	4	12.9032
IRS2	0	genome.wustl.edu	37	13	110436712	110436712	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	110436712	110436712	C	T	SNP	IRS2	ENST00000375856	human	ensembl	74_37	-1	known	silent	c.1689	p.A563	0.139	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS2	HGNC	ENSG00000185950				57	0	0	37	5	11.9048
COL4A1	0	genome.wustl.edu	37	13	110814631	110814631	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	110814631	110814631	C	T	SNP	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	missense	c.4408	p.G1470R	1.000	pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498				461	0	0	276	71	20.4611
COL4A1	0	genome.wustl.edu	37	13	110835356	110835356	+	Silent	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	110835356	110835356	C	G	SNP	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	silent	c.2079	p.G693	1.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498				23	0	0	21	7	25
MCF2L	0	genome.wustl.edu	37	13	113634015	113634015	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	113634015	113634015	C	T	SNP	MCF2L	ENST00000375601	human	ensembl	74_37	+1	known	missense	c.34	p.R12W	0.016	NULL	pfam_DH-domain,pfam_Spectrin_repeat,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	MCF2L	HGNC	ENSG00000126217				52	0	0	41	6	12.766
MICU2	0	genome.wustl.edu	37	13	22095413	22095413	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	22095413	22095413	C	A	SNP	MICU2	ENST00000382374	human	ensembl	74_37	-1	known	nonsense	c.568	p.E190*	1.000	smart_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MICU2	HGNC	ENSG00000165487				49	0	0	34	7	17.0732
SACS	0	genome.wustl.edu	37	13	23906308	23906308	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	23906308	23906308	G	A	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	nonsense	c.11707	p.R3903*	0.889	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				209	0	0	137	32	18.9349
MIPEP	0	genome.wustl.edu	37	13	24330693	24330693	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	24330693	24330693	T	C	SNP	MIPEP	ENST00000382172	human	ensembl	74_37	-1	known	missense	c.2035	p.M679V	1.000	pfam_Pept_M3A_M3B	pfam_Pept_M3A_M3B	-	no_errors	MIPEP	HGNC	ENSG00000027001				123	1	0.806452	62	8	11.4286
CENPJ	0	genome.wustl.edu	37	13	25480097	25480097	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	25480097	25480097	G	A	SNP	CENPJ	ENST00000381884	human	ensembl	74_37	-1	known	silent	c.2079	p.D693	0.982	NULL	pfam_Tcp10_C_dom	-	no_errors	CENPJ	HGNC	ENSG00000151849				70	0	0	44	12	21.4286
GSX1	0	genome.wustl.edu	37	13	28367140	28367140	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	28367140	28367140	G	A	SNP	GSX1	ENST00000302945	human	ensembl	74_37	+1	known	missense	c.313	p.G105R	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	GSX1	HGNC	ENSG00000169840				16	0	0	10	3	23.0769
MTUS2	0	genome.wustl.edu	37	13	29599560	29599560	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	29599560	29599560	G	A	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.755	p.R252H	0.000	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938				38	0	0	31	8	20.5128
HSPH1	0	genome.wustl.edu	37	13	31725098	31725098	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	31725098	31725098	G	A	SNP	HSPH1	ENST00000445273	human	ensembl	74_37	-1	known	silent	c.900	p.S300	0.006	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPH1	HGNC	ENSG00000120694				62	0	0	37	5	11.9048
BRCA2	0	genome.wustl.edu	37	13	32912670	32912670	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	32912670	32912670	C	T	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.4178	p.A1393V	0.756	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618				78	0	0	54	5	8.47458
BRCA2	0	genome.wustl.edu	37	13	32915239	32915239	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	32915239	32915239	C	T	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	silent	c.6747	p.A2249	0.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618				190	0	0	171	33	16.1765
BRCA2	0	genome.wustl.edu	37	13	32972773	32972773	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	32972773	32972773	A	G	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.10123	p.S3375G	0.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618				86	0	0	77	7	8.33333
CCDC169-SOHLH2	0	genome.wustl.edu	37	13	36767799	36767799	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	36767799	36767799	C	T	SNP	CCDC169-SOHLH2	ENST00000511166	human	ensembl	74_37	-1	known	missense	c.620	p.S207N	0.045	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	CCDC169-SOHLH2	HGNC	ENSG00000250709				112	0	0	91	6	6.18557
SPG20	0	genome.wustl.edu	37	13	36905566	36905566	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	36905566	36905566	C	A	SNP	SPG20	ENST00000355182	human	ensembl	74_37	-1	known	silent	c.978	p.L326	0.008	NULL	pfam_Senescence/spartin,pfam_MIT,smart_MIT	-	no_errors	SPG20	HGNC	ENSG00000133104				132	0	0	73	21	22.3404
WBP4	0	genome.wustl.edu	37	13	41645700	41645700	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	41645700	41645700	C	T	SNP	WBP4	ENST00000379487	human	ensembl	74_37	+1	known	silent	c.477	p.D159	0.734	superfamily_WW_dom	pfam_WW_dom,pfam_Znf_U1-C,superfamily_WW_dom,smart_Znf_U1,smart_WW_dom,pfscan_WW_dom,pfscan_Znf_C2H2_matrin	-	no_errors	WBP4	HGNC	ENSG00000120688				97	0	0	61	15	19.7368
ENOX1	0	genome.wustl.edu	37	13	43934138	43934138	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	43934138	43934138	G	A	SNP	ENOX1	ENST00000261488	human	ensembl	74_37	-1	known	silent	c.438	p.V146	0.123	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ENOX1	HGNC	ENSG00000120658				74	0	0	62	6	8.82353
TSC22D1	0	genome.wustl.edu	37	13	45149730	45149730	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	45149730	45149730	T	C	SNP	TSC22D1	ENST00000458659	human	ensembl	74_37	-1	known	missense	c.481	p.R161G	1.000	NULL	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D1	HGNC	ENSG00000102804				101	0	0	46	12	20.6897
NUFIP1	0	genome.wustl.edu	37	13	45563443	45563443	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	45563443	45563443	C	T	SNP	NUFIP1	ENST00000379161	human	ensembl	74_37	-1	known	silent	c.129	p.L43	0.180	NULL	pfam_NUFIP1_cons_dom,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	NUFIP1	HGNC	ENSG00000083635				31	0	0	20	4	16.6667
ZC3H13	0	genome.wustl.edu	37	13	46559623	46559623	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	46559623	46559623	C	T	SNP	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	missense	c.1529	p.R510H	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200				146	0	0	91	32	26.0163
HTR2A	0	genome.wustl.edu	37	13	47409176	47409176	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	47409176	47409176	T	G	SNP	HTR2A	ENST00000378688	human	ensembl	74_37	-1	known	missense	c.1212	p.K404N	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT2A_rcpt,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR2A	HGNC	ENSG00000102468				117	0	0	83	23	21.6981
ATP7B	0	genome.wustl.edu	37	13	52524252	52524252	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	52524252	52524252	G	A	SNP	ATP7B	ENST00000242839	human	ensembl	74_37	-1	known	missense	c.2621	p.A874V	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_Cation_transp_P_typ_ATPase,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7B	HGNC	ENSG00000123191				89	0	0	55	16	22.5352
PCDH8	0	genome.wustl.edu	37	13	53420573	53420573	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	53420573	53420573	G	T	SNP	PCDH8	ENST00000377942	human	ensembl	74_37	-1	known	missense	c.1999	p.R667S	0.930	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH8	HGNC	ENSG00000136099				34	0	0	27	7	20.5882
PCDH17	0	genome.wustl.edu	37	13	58207209	58207209	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	58207209	58207209	G	A	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.529	p.G177S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946				52	0	0	33	9	21.4286
FARP1	0	genome.wustl.edu	37	13	99030142	99030142	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	99030142	99030142	G	A	SNP	FARP1	ENST00000376586	human	ensembl	74_37	+1	known	missense	c.466	p.A156T	0.998	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM-adjacent,pfam_FERM_central,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP1	HGNC	ENSG00000152767				103	0	0	65	11	14.4737
DOCK9	0	genome.wustl.edu	37	13	99515694	99515694	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	99515694	99515694	C	T	SNP	DOCK9	ENST00000339416	human	ensembl	74_37	-1	known	missense	c.3398	p.R1133H	0.999	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK9	HGNC	ENSG00000088387				153	0	0	83	19	18.6275
SNORD114-24	0	genome.wustl.edu	37	14	101451116	101451116	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	101451116	101451116	G	A	SNP	SNORD114-24	ENST00000365029	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD114-24	HGNC	ENSG00000201899				128	0	0	125	11	8.08824
RCOR1	0	genome.wustl.edu	37	14	103059413	103059413	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	103059413	103059413	G	C	SNP	RCOR1	ENST00000262241	human	ensembl	74_37	+1	known	missense	c.190	p.A64P	0.673	prints_Antifreeze_1	pfam_SANT/Myb,pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom,prints_Antifreeze_1	-	no_errors	RCOR1	HGNC	ENSG00000089902				9	0	0	3	3	50
XRCC3	0	genome.wustl.edu	37	14	104165791	104165791	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	104165791	104165791	G	A	SNP	XRCC3	ENST00000352127	human	ensembl	74_37	-1	known	silent	c.684	p.S228	0.000	pfam_DNA_recomb/repair_Rad51_C,superfamily_P-loop_NTPase,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd	pfam_DNA_recomb/repair_Rad51_C,superfamily_P-loop_NTPase,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd	-	no_errors	XRCC3	HGNC	ENSG00000126215				73	0	0	48	12	20
AHNAK2	0	genome.wustl.edu	37	14	105410343	105410343	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	105410343	105410343	C	T	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	silent	c.11445	p.V3815	0.002	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				440	0	0	346	25	6.73854
AHNAK2	0	genome.wustl.edu	37	14	105416190	105416190	+	Silent	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	105416190	105416190	G	C	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	silent	c.5598	p.L1866	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				66	0	0	40	5	11.1111
JAG2	0	genome.wustl.edu	37	14	105618041	105618041	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	105618041	105618041	C	T	SNP	JAG2	ENST00000331782	human	ensembl	74_37	-1	known	missense	c.1075	p.G359R	1.000	pfam_EG-like_dom,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	JAG2	HGNC	ENSG00000184916				26	0	0	12	4	25
BRF1	0	genome.wustl.edu	37	14	105683991	105683991	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	105683991	105683991	C	T	SNP	BRF1	ENST00000546474	human	ensembl	74_37	-1	known	silent	c.1662	p.P554	0.000	NULL	pfam_TFIIB_cyclin,pfam_BRF1_TBP-bd,pfam_Znf_TFIIB,superfamily_Cyclin-like,smart_Cyclin-like,pfscan_Znf_TFIIB,prints_TFIIB	-	no_errors	BRF1	HGNC	ENSG00000185024				67	0	0	37	15	28.8462
ARHGEF40	0	genome.wustl.edu	37	14	21542925	21542925	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	21542925	21542925	G	A	SNP	ARHGEF40	ENST00000298694	human	ensembl	74_37	+1	known	missense	c.1036	p.G346R	0.114	NULL	pfam_DH-domain,superfamily_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF40	HGNC	ENSG00000165801				28	0	0	24	3	11.1111
JPH4	0	genome.wustl.edu	37	14	24041061	24041061	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	24041061	24041061	C	T	SNP	JPH4	ENST00000356300	human	ensembl	74_37	-1	known	missense	c.1220	p.R407Q	1.000	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH4	HGNC	ENSG00000092051				136	0	0	106	18	14.5161
PRKD1	0	genome.wustl.edu	37	14	30100065	30100065	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	30100065	30100065	C	T	SNP	PRKD1	ENST00000331968	human	ensembl	74_37	-1	known	missense	c.1555	p.V519I	0.010	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304				170	0	0	106	26	19.697
ARHGAP5	0	genome.wustl.edu	37	14	32561268	32561268	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	32561268	32561268	T	C	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.1393	p.Y465H	1.000	superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852				141	0	0	104	16	13.3333
AKAP6	0	genome.wustl.edu	37	14	33291546	33291546	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	33291546	33291546	C	T	SNP	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	silent	c.4527	p.C1509	1.000	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320				80	0	0	69	13	15.8537
NPAS3	0	genome.wustl.edu	37	14	34269096	34269096	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	34269096	34269096	G	A	SNP	NPAS3	ENST00000356141	human	ensembl	74_37	+1	known	missense	c.1583	p.S528N	1.000	NULL	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS3	HGNC	ENSG00000151322				69	0	0	37	11	22.9167
BAZ1A	0	genome.wustl.edu	37	14	35245412	35245412	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	35245412	35245412	T	C	SNP	BAZ1A	ENST00000360310	human	ensembl	74_37	-1	known	missense	c.2546	p.Q849R	1.000	NULL	pfam_WSTF_Acf1_Cbp146,pfam_Bromodomain,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_WSTF_Acf1_Cbp146,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ1A	HGNC	ENSG00000198604				132	0	0	91	14	13.3333
RALGAPA1	0	genome.wustl.edu	37	14	36074845	36074845	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	36074845	36074845	T	C	SNP	RALGAPA1	ENST00000258840	human	ensembl	74_37	-1	known	missense	c.5623	p.N1875D	1.000	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPA1	HGNC	ENSG00000174373				110	0	0	86	14	14
POLE2	0	genome.wustl.edu	37	14	50140860	50140860	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	50140860	50140860	C	T	SNP	POLE2	ENST00000216367	human	ensembl	74_37	-1	known	missense	c.398	p.R133Q	1.000	pirsf_DNA_pol_e_bsu	pfam_DNA_pol_alpha/epsilon_bsu,pfam_DNA_pol_e_bsu_N,pirsf_DNA_pol_e_bsu	-	no_errors	POLE2	HGNC	ENSG00000100479				327	0	0	221	68	23.5294
NID2	0	genome.wustl.edu	37	14	52478332	52478332	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	52478332	52478332	G	A	SNP	NID2	ENST00000216286	human	ensembl	74_37	-1	known	missense	c.3490	p.R1164W	0.930	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd_dom,superfamily_GFP,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EG-like_dom,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID2	HGNC	ENSG00000087303				204	1	0.487805	140	40	22.2222
PPM1A	0	genome.wustl.edu	37	14	60758133	60758133	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	60758133	60758133	C	T	SNP	PPM1A	ENST00000325642	human	ensembl	74_37	+1	known	silent	c.1299	p.A433	0.813	pfam_PP2C_C,superfamily_PP2C_C	pfam_PP2C-like_dom,pfam_PP2C_C,superfamily_PP2C-like_dom,superfamily_PP2C_C,smart_PP2C-like_dom	-	no_errors	PPM1A	HGNC	ENSG00000100614				80	0	0	56	12	17.6471
TMEM30B	0	genome.wustl.edu	37	14	61747056	61747056	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	61747056	61747056	G	A	SNP	TMEM30B	ENST00000355702	human	ensembl	74_37	-1	known	silent	c.810	p.R270	1.000	pfam_DUF284_TM_euk,pirsf_DUF284_TM_euk	pfam_DUF284_TM_euk,pirsf_DUF284_TM_euk	-	no_errors	TMEM30B	HGNC	ENSG00000182107				72	0	0	57	13	18.5714
SYNE2	0	genome.wustl.edu	37	14	64519599	64519599	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	64519599	64519599	G	A	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.8968	p.A2990T	0.000	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				101	0	0	58	8	12.1212
AKAP5	0	genome.wustl.edu	37	14	64935359	64935359	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	64935359	64935359	A	G	SNP	AKAP5	ENST00000320636	human	ensembl	74_37	+1	known	missense	c.247	p.K83E	0.911	pfam_Pkinase-A_anch_WSK-motif	pfam_Pkinase-A_anch_WSK-motif	-	no_errors	AKAP5	HGNC	ENSG00000179841				149	1	0.666667	117	11	8.59375
TMEM229B	0	genome.wustl.edu	37	14	67940618	67940618	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	67940618	67940618	G	A	SNP	TMEM229B	ENST00000357461	human	ensembl	74_37	-1	known	missense	c.23	p.T8M	1.000	NULL	pfam_DUF1113_TMEM229	-	no_errors	TMEM229B	HGNC	ENSG00000198133				27	0	0	13	2	13.3333
RGS6	0	genome.wustl.edu	37	14	72818835	72818835	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	72818835	72818835	C	T	SNP	RGS6	ENST00000553525	human	ensembl	74_37	+1	known	silent	c.117	p.D39	1.000	NULL	pfam_RGS_dom,pfam_G-protein_gamma-like_dom,pfam_DEP_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_G-protein_gamma-like_dom,smart_DEP_dom,smart_G-protein_gamma-like_dom,smart_Regulat_G_prot_signal_superfam,pfscan_DEP_dom,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS6	HGNC	ENSG00000182732				59	0	0	29	8	21.6216
ELMSAN1	0	genome.wustl.edu	37	14	74205578	74205578	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	74205578	74205578	A	C	SNP	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	missense	c.1134	p.H378Q	0.998	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030				47	0	0	36	10	21.7391
ALDH6A1	0	genome.wustl.edu	37	14	74534179	74534179	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	74534179	74534179	G	A	SNP	ALDH6A1	ENST00000553458	human	ensembl	74_37	-1	known	missense	c.946	p.R316C	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_MeMal-semiAld_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_MeMal-semiAld_DH	-	no_errors	ALDH6A1	HGNC	ENSG00000119711				114	0	0	62	28	31.1111
MLH3	0	genome.wustl.edu	37	14	75513915	75513915	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	75513915	75513915	T	C	SNP	MLH3	ENST00000355774	human	ensembl	74_37	-1	known	missense	c.2444	p.D815G	0.003	NULL	pfam_MutL_C,pfam_DNA_mismatch_repair_C,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_WW_dom,smart_MutL_C	-	no_errors	MLH3	HGNC	ENSG00000119684				149	0	0	129	8	5.83942
TGFB3	0	genome.wustl.edu	37	14	76429726	76429726	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	76429726	76429726	G	A	SNP	TGFB3	ENST00000238682	human	ensembl	74_37	-1	known	missense	c.859	p.R287W	1.000	pirsf_TGF-beta,prints_Transform_grow_fac_b3	pirsf_TGF-beta,pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Transform_grow_fac_b3,prints_TGF-beta	-	no_errors	TGFB3	HGNC	ENSG00000119699				147	0	0	75	23	23.4694
IRF2BPL	0	genome.wustl.edu	37	14	77492017	77492017	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	77492017	77492017	T	C	SNP	IRF2BPL	ENST00000238647	human	ensembl	74_37	-1	known	missense	c.2119	p.M707V	1.000	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BPL	HGNC	ENSG00000119669				58	0	0	39	8	17.0213
TMEM63C	0	genome.wustl.edu	37	14	77712359	77712359	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	77712359	77712359	G	T	SNP	TMEM63C	ENST00000298351	human	ensembl	74_37	+1	known	nonsense	c.1525	p.G509*	1.000	pfam_DUF221	pfam_DUF221	-	no_errors	TMEM63C	HGNC	ENSG00000165548				159	0	0	98	10	9.25926
TMEM63C	0	genome.wustl.edu	37	14	77715752	77715752	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	77715752	77715752	G	A	SNP	TMEM63C	ENST00000298351	human	ensembl	74_37	+1	known	silent	c.1989	p.A663	0.000	pfam_DUF221	pfam_DUF221	-	no_errors	TMEM63C	HGNC	ENSG00000165548				72	0	0	54	20	27.027
NRXN3	0	genome.wustl.edu	37	14	80328022	80328022	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	80328022	80328022	G	T	SNP	NRXN3	ENST00000335750	human	ensembl	74_37	+1	known	silent	c.2901	p.P967	0.969	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				72	0	0	41	11	21.1538
BTBD7	0	genome.wustl.edu	37	14	93723553	93723553	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	93723553	93723553	G	A	SNP	BTBD7	ENST00000334746	human	ensembl	74_37	-1	known	silent	c.1596	p.V532	1.000	smart_BACK	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD7	HGNC	ENSG00000011114				97	0	0	59	13	18.0556
UNC79	0	genome.wustl.edu	37	14	94007040	94007040	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	94007040	94007040	C	T	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	nonsense	c.1387	p.R463*	1.000	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				123	0	0	99	7	6.60377
SERPINA4	0	genome.wustl.edu	37	14	95033573	95033573	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	95033573	95033573	C	T	SNP	SERPINA4	ENST00000298841	human	ensembl	74_37	+1	known	missense	c.916	p.R306W	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA4	HGNC	ENSG00000100665				69	0	0	59	15	20.2703
ADAMTS17	0	genome.wustl.edu	37	15	100802556	100802556	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	100802556	100802556	C	T	SNP	ADAMTS17	ENST00000268070	human	ensembl	74_37	-1	known	splice_site	c.873+1	e5+1	1.000	-	-	-	no_errors	ADAMTS17	HGNC	ENSG00000140470				191	0	0	108	19	14.9606
LRRK1	0	genome.wustl.edu	37	15	101605617	101605617	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	101605617	101605617	C	T	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	missense	c.4975	p.R1659W	0.359	superfamily_WD40_repeat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237				176	1	0.564972	110	27	19.708
MKRN3	0	genome.wustl.edu	37	15	23812238	23812238	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	23812238	23812238	T	C	SNP	MKRN3	ENST00000314520	human	ensembl	74_37	+1	known	missense	c.1309	p.S437P	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455				113	0	0	65	16	19.7531
MAGEL2	0	genome.wustl.edu	37	15	23889846	23889846	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	23889846	23889846	T	G	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.1235	p.Q412P	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585				68	0	0	28	5	15.1515
ULK4P3	0	genome.wustl.edu	37	15	30406180	30406180	+	RNA	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	30406180	30406180	A	T	SNP	ULK4P3	ENST00000566138	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.442	-	-	-	no_errors	ULK4P3	HGNC	ENSG00000178081				35	0	0	14	9	39.1304
RYR3	0	genome.wustl.edu	37	15	33928729	33928729	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	33928729	33928729	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	silent	c.3534	p.F1178	0.827	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				143	0	0	100	8	7.40741
SPRED1	0	genome.wustl.edu	37	15	38632012	38632012	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	38632012	38632012	G	A	SNP	SPRED1	ENST00000299084	human	ensembl	74_37	+1	known	silent	c.498	p.E166	0.993	NULL	pfam_Sprouty,pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	SPRED1	HGNC	ENSG00000166068				79	0	0	40	17	29.8246
C15orf54	0	genome.wustl.edu	37	15	39544753	39544753	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	39544753	39544753	C	T	SNP	C15orf54	ENST00000318578	human	ensembl	74_37	+1	known	silent	c.417	p.C139	0.000	NULL	NULL	-	no_errors	C15orf54	HGNC	ENSG00000175746				168	0	0	124	15	10.7914
THBS1	0	genome.wustl.edu	37	15	39885727	39885727	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	39885727	39885727	A	G	SNP	THBS1	ENST00000260356	human	ensembl	74_37	+1	known	missense	c.3125	p.Q1042R	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl_sf	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801				222	0	0	147	15	9.25926
EIF2AK4	0	genome.wustl.edu	37	15	40318214	40318214	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	40318214	40318214	C	T	SNP	EIF2AK4	ENST00000263791	human	ensembl	74_37	+1	known	missense	c.4426	p.R1476C	1.000	superfamily_Anticodon-bd,pirsf_Ser/Thr_kinase_GCN2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RWD-domain,superfamily_Kinase-like_dom,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Anticodon-bd,smart_RWD-domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_GCN2,pfscan_RWD-domain,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK4	HGNC	ENSG00000128829				67	0	0	60	7	10.4478
ENSG00000259536	0	genome.wustl.edu	37	15	40849370	40849370	+	RNA	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	40849370	40849370	A	G	SNP	ENSG00000259536	ENST00000561460	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-111A22.1	Clone_based_vega_gene	ENSG00000259536				56	0	0	39	8	17.0213
RPUSD2	0	genome.wustl.edu	37	15	40865952	40865952	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	40865952	40865952	A	G	SNP	RPUSD2	ENST00000315616	human	ensembl	74_37	+1	known	missense	c.1130	p.Q377R	1.000	pfam_PsdUridine_synth_RsuA/RluD,superfamily_PsdUridine_synth_cat_dom,tigrfam_PsdUridine_synth_RluC/D	pfam_PsdUridine_synth_RsuA/RluD,superfamily_PsdUridine_synth_cat_dom,tigrfam_PsdUridine_synth_RluC/D	-	no_errors	RPUSD2	HGNC	ENSG00000166133				93	0	0	53	10	15.873
VPS18	0	genome.wustl.edu	37	15	41188187	41188187	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	41188187	41188187	G	A	SNP	VPS18	ENST00000220509	human	ensembl	74_37	+1	known	missense	c.143	p.R48H	1.000	NULL	pfam_Pep3_Vps18,pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold	-	no_errors	VPS18	HGNC	ENSG00000104142				234	0	0	161	17	9.55056
SPTBN5	0	genome.wustl.edu	37	15	42151169	42151169	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	42151169	42151169	C	T	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	silent	c.7998	p.A2666	0.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877				14	0	0	8	3	27.2727
GANC	0	genome.wustl.edu	37	15	42602614	42602614	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	42602614	42602614	A	G	SNP	GANC	ENST00000318010	human	ensembl	74_37	+1	known	missense	c.856	p.N286D	1.000	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom	-	no_errors	GANC	HGNC	ENSG00000214013				58	0	0	41	8	16.3265
ADAL	0	genome.wustl.edu	37	15	43627977	43627977	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	43627977	43627977	C	T	SNP	ADAL	ENST00000422466	human	ensembl	74_37	+1	known	silent	c.147	p.H49	0.000	pfam_A/AMP_deaminase_dom	pfam_A/AMP_deaminase_dom	-	no_errors	ADAL	HGNC	ENSG00000168803				136	0	0	94	17	15.3153
ZSCAN29	0	genome.wustl.edu	37	15	43654005	43654005	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	43654005	43654005	T	G	SNP	ZSCAN29	ENST00000396976	human	ensembl	74_37	-1	known	missense	c.1825	p.S609R	0.019	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN29	HGNC	ENSG00000140265				235	0	0	156	13	7.69231
WDR76	0	genome.wustl.edu	37	15	44143344	44143344	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	44143344	44143344	C	T	SNP	WDR76	ENST00000263795	human	ensembl	74_37	+1	known	silent	c.1092	p.S364	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR76	HGNC	ENSG00000092470				192	0	0	116	38	24.6753
C15orf43	0	genome.wustl.edu	37	15	45250696	45250696	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	45250696	45250696	C	T	SNP	C15orf43	ENST00000340827	human	ensembl	74_37	+1	known	missense	c.272	p.A91V	0.862	NULL	NULL	-	no_errors	C15orf43	HGNC	ENSG00000167014				32	0	0	16	5	23.8095
DUOX1	0	genome.wustl.edu	37	15	45444607	45444607	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	45444607	45444607	G	A	SNP	DUOX1	ENST00000321429	human	ensembl	74_37	+1	known	missense	c.3317	p.R1106H	1.000	pfam_Fe3_Rdtase_TM_dom	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX1	HGNC	ENSG00000137857				97	0	0	67	10	12.987
SECISBP2L	0	genome.wustl.edu	37	15	49327620	49327620	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	49327620	49327620	A	G	SNP	SECISBP2L	ENST00000559471	human	ensembl	74_37	-1	known	missense	c.439	p.C147R	0.997	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2L	HGNC	ENSG00000138593				160	0	0	96	31	24.4094
ATP8B4	0	genome.wustl.edu	37	15	50168644	50168644	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	50168644	50168644	C	T	SNP	ATP8B4	ENST00000284509	human	ensembl	74_37	-1	known	missense	c.2858	p.R953H	0.999	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B4	HGNC	ENSG00000104043				83	0	0	68	14	17.0732
UNC13C	0	genome.wustl.edu	37	15	54306982	54306982	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	54306982	54306982	G	T	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	nonsense	c.1882	p.G628*	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766				140	0	0	85	11	11.4583
DYX1C1	0	genome.wustl.edu	37	15	55790442	55790442	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	55790442	55790442	C	T	SNP	DYX1C1	ENST00000321149	human	ensembl	74_37	-1	known	missense	c.86	p.R29K	0.006	pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	pfam_TPR_1,pfam_CS_dom,superfamily_HSP20-like_chaperone,smart_TPR_repeat,pfscan_CS_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	DYX1C1	HGNC	ENSG00000256061				58	0	0	38	4	9.52381
PYGO1	0	genome.wustl.edu	37	15	55841142	55841142	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	55841142	55841142	C	T	SNP	PYGO1	ENST00000302000	human	ensembl	74_37	-1	known	missense	c.101	p.S34N	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PYGO1	HGNC	ENSG00000171016				91	0	0	58	15	20.5479
FOXB1	0	genome.wustl.edu	37	15	60297960	60297960	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	60297960	60297960	G	A	SNP	FOXB1	ENST00000396057	human	ensembl	74_37	+1	known	silent	c.798	p.T266	0.845	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXB1	HGNC	ENSG00000171956				26	0	0	18	6	25
TLN2	0	genome.wustl.edu	37	15	63089583	63089583	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	63089583	63089583	C	T	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	silent	c.6216	p.S2072	0.003	superfamily_Vinculin/catenin	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914				59	0	0	39	3	7.14286
ZWILCH	0	genome.wustl.edu	37	15	66819666	66819666	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	66819666	66819666	G	A	SNP	ZWILCH	ENST00000307897	human	ensembl	74_37	+1	known	nonsense	c.858	p.W286*	1.000	pfam_RZZ-complex_zwilch	pfam_RZZ-complex_zwilch	-	no_errors	ZWILCH	HGNC	ENSG00000174442				57	0	0	43	20	31.746
LCTL	0	genome.wustl.edu	37	15	66857094	66857094	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	66857094	66857094	C	T	SNP	LCTL	ENST00000341509	human	ensembl	74_37	-1	known	missense	c.202	p.V68I	0.272	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCTL	HGNC	ENSG00000188501				156	0	0	114	15	11.6279
IQCH	0	genome.wustl.edu	37	15	67757528	67757528	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	67757528	67757528	T	C	SNP	IQCH	ENST00000335894	human	ensembl	74_37	+1	known	missense	c.2569	p.Y857H	0.767	NULL	superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCH	HGNC	ENSG00000103599				121	0	0	76	12	13.6364
PIAS1	0	genome.wustl.edu	37	15	68445963	68445963	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	68445963	68445963	G	A	SNP	PIAS1	ENST00000249636	human	ensembl	74_37	+1	known	silent	c.864	p.L288	1.000	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS1	HGNC	ENSG00000033800				36	0	0	37	8	17.7778
THSD4	0	genome.wustl.edu	37	15	71535237	71535237	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	71535237	71535237	G	A	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	silent	c.714	p.A238	0.000	pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720				116	0	0	60	23	27.7108
PKM	0	genome.wustl.edu	37	15	72494845	72494845	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	72494845	72494845	G	T	SNP	PKM	ENST00000335181	human	ensembl	74_37	-1	known	silent	c.1257	p.A419	0.984	pfam_Pyrv_Knase_C,superfamily_Pyrv_Knase_C,tigrfam_Pyr_Knase	pfam_Pyrv_Knase_brl,pfam_Pyrv_Knase_C,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,superfamily_Pyrv_Knase_C,superfamily_Pyrv_Knase-like_insert_dom,prints_Pyr_Knase,tigrfam_Pyr_Knase	-	no_errors	PKM	HGNC	ENSG00000067225				50	0	0	28	2	6.66667
HCN4	0	genome.wustl.edu	37	15	73617395	73617395	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	73617395	73617395	T	C	SNP	HCN4	ENST00000261917	human	ensembl	74_37	-1	known	missense	c.1879	p.T627A	1.000	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,pfscan_cNMP-bd_dom	-	no_errors	HCN4	HGNC	ENSG00000138622				135	0	0	81	10	10.989
ARID3B	0	genome.wustl.edu	37	15	74836313	74836313	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	74836313	74836313	G	A	SNP	ARID3B	ENST00000346246	human	ensembl	74_37	+1	known	silent	c.36	p.Q12	0.998	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3B	HGNC	ENSG00000179361				38	0	0	19	6	24
CLK3	0	genome.wustl.edu	37	15	74912475	74912475	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	74912475	74912475	G	A	SNP	CLK3	ENST00000395066	human	ensembl	74_37	+1	known	missense	c.722	p.R241Q	0.184	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CLK3	HGNC	ENSG00000179335				286	0	0	217	23	9.58333
CSK	0	genome.wustl.edu	37	15	75091041	75091041	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	75091041	75091041	A	G	SNP	CSK	ENST00000220003	human	ensembl	74_37	+1	known	missense	c.101	p.D34G	0.999	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	CSK	HGNC	ENSG00000103653				56	0	0	32	6	15.7895
MAN2C1	0	genome.wustl.edu	37	15	75648732	75648732	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	75648732	75648732	C	A	SNP	MAN2C1	ENST00000267978	human	ensembl	74_37	-1	known	missense	c.2796	p.L932F	0.035	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2C1	HGNC	ENSG00000140400				23	0	0	18	7	28
SIN3A	0	genome.wustl.edu	37	15	75676749	75676749	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	75676749	75676749	A	G	SNP	SIN3A	ENST00000360439	human	ensembl	74_37	-1	known	silent	c.3051	p.C1017	1.000	NULL	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3A	HGNC	ENSG00000169375				100	0	0	58	20	25.641
SCAPER	0	genome.wustl.edu	37	15	76673718	76673718	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	76673718	76673718	C	A	SNP	SCAPER	ENST00000324767	human	ensembl	74_37	-1	known	splice_site	c.3705+1	e27+1	1.000	-	-	-	no_errors	SCAPER	HGNC	ENSG00000140386				22	0	0	23	3	11.5385
IL16	0	genome.wustl.edu	37	15	81592247	81592247	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	81592247	81592247	G	T	SNP	IL16	ENST00000302987	human	ensembl	74_37	+1	known	missense	c.2580	p.Q860H	0.998	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,prints_IL-16	-	no_errors	IL16	HGNC	ENSG00000172349				70	0	0	50	15	23.0769
EFTUD1P1	0	genome.wustl.edu	37	15	84790287	84790287	+	RNA	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	84790287	84790287	A	G	SNP	EFTUD1P1	ENST00000560381	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	EFTUD1P1	HGNC	ENSG00000259404				83	0	0	59	9	13.2353
ALPK3	0	genome.wustl.edu	37	15	85406054	85406054	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	85406054	85406054	C	A	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	missense	c.4924	p.R1642S	1.000	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383				75	0	0	72	9	11.1111
KLHL25	0	genome.wustl.edu	37	15	86312936	86312936	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	86312936	86312936	G	T	SNP	KLHL25	ENST00000337975	human	ensembl	74_37	-1	known	missense	c.106	p.L36I	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL25	HGNC	ENSG00000183655				89	0	0	68	5	6.84932
TPSD1	0	genome.wustl.edu	37	16	1306823	1306823	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	1306823	1306823	A	G	SNP	TPSD1	ENST00000211076	human	ensembl	74_37	+1	known	missense	c.280	p.R94G	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	TPSD1	HGNC	ENSG00000095917				46	0	0	26	4	13.3333
MKL2	0	genome.wustl.edu	37	16	14341272	14341272	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	14341272	14341272	A	G	SNP	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	missense	c.2122	p.T708A	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260				51	0	0	41	3	6.81818
CLCN7	0	genome.wustl.edu	37	16	1502845	1502845	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	1502845	1502845	C	T	SNP	CLCN7	ENST00000382745	human	ensembl	74_37	-1	known	missense	c.1264	p.A422T	0.994	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-7	-	no_errors	CLCN7	HGNC	ENSG00000103249				14	0	0	13	4	23.5294
PKD1P6	0	genome.wustl.edu	37	16	15222202	15222202	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	15222202	15222202	G	A	SNP	PKD1P6	ENST00000424133	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PKD1P6	HGNC	ENSG00000250251				45	0	0	25	4	13.7931
GPRC5B	0	genome.wustl.edu	37	16	19883215	19883215	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	19883215	19883215	G	A	SNP	GPRC5B	ENST00000537135	human	ensembl	74_37	-1	known	missense	c.1031	p.T344M	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5B	HGNC	ENSG00000167191				136	0	0	81	9	10
GPRC5B	0	genome.wustl.edu	37	16	19883779	19883779	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	19883779	19883779	C	T	SNP	GPRC5B	ENST00000537135	human	ensembl	74_37	-1	known	missense	c.467	p.G156D	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5B	HGNC	ENSG00000167191				41	0	0	27	3	10
TSC2	0	genome.wustl.edu	37	16	2122296	2122296	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	2122296	2122296	C	T	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.2152	p.R718C	1.000	pfam_Tuberin-type_domain,prints_Tuberin	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197				127	0	0	97	24	19.8347
ANKS4B	0	genome.wustl.edu	37	16	21261128	21261128	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	21261128	21261128	G	A	SNP	ANKS4B	ENST00000311620	human	ensembl	74_37	+1	known	missense	c.241	p.V81I	0.998	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKS4B	HGNC	ENSG00000175311				83	0	0	60	6	9.09091
OTOA	0	genome.wustl.edu	37	16	21702982	21702982	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	21702982	21702982	T	C	SNP	OTOA	ENST00000286149	human	ensembl	74_37	+1	known	missense	c.713	p.I238T	0.003	NULL	NULL	-	no_errors	OTOA	HGNC	ENSG00000155719				56	0	0	35	3	7.89474
MLST8	0	genome.wustl.edu	37	16	2258236	2258236	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	2258236	2258236	C	T	SNP	MLST8	ENST00000397124	human	ensembl	74_37	+1	known	missense	c.599	p.T200M	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	MLST8	HGNC	ENSG00000167965				212	0	0	162	13	7.42857
ABCA3	0	genome.wustl.edu	37	16	2333309	2333309	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	2333309	2333309	G	A	SNP	ABCA3	ENST00000301732	human	ensembl	74_37	-1	known	missense	c.3913	p.R1305W	0.995	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA3	HGNC	ENSG00000167972				93	0	0	52	13	20
COG7	0	genome.wustl.edu	37	16	23430031	23430031	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	23430031	23430031	G	A	SNP	COG7	ENST00000307149	human	ensembl	74_37	-1	known	missense	c.1127	p.A376V	1.000	pfam_COG7	pfam_COG7	-	no_errors	COG7	HGNC	ENSG00000168434				60	0	0	53	4	7.01754
TNRC6A	0	genome.wustl.edu	37	16	24834864	24834864	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	24834864	24834864	C	T	SNP	TNRC6A	ENST00000395799	human	ensembl	74_37	+1	known	silent	c.5625	p.L1875	0.224	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6A	HGNC	ENSG00000090905				216	0	0	149	40	21.164
NTN3	0	genome.wustl.edu	37	16	2522140	2522140	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	2522140	2522140	G	A	SNP	NTN3	ENST00000293973	human	ensembl	74_37	+1	known	silent	c.438	p.P146	0.215	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_EGF_laminin,pfam_Laminin_N,pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,smart_Laminin_N,smart_EGF_laminin,smart_Netrin_module_non-TIMP,pfscan_EGF_laminin,pfscan_Laminin_N,pfscan_Netrin_domain	-	no_errors	NTN3	HGNC	ENSG00000162068				63	0	0	40	8	16.6667
ZKSCAN2	0	genome.wustl.edu	37	16	25268437	25268437	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	25268437	25268437	G	A	SNP	ZKSCAN2	ENST00000328086	human	ensembl	74_37	-1	known	silent	c.12	p.A4	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN2	HGNC	ENSG00000155592				194	0	0	118	36	23.3766
IL21R	0	genome.wustl.edu	37	16	27455956	27455956	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	27455956	27455956	C	T	SNP	IL21R	ENST00000337929	human	ensembl	74_37	+1	known	missense	c.601	p.R201W	1.000	superfamily_Fibronectin_type3	superfamily_Fibronectin_type3	-	no_errors	IL21R	HGNC	ENSG00000103522				114	0	0	67	18	21.1765
GTF3C1	0	genome.wustl.edu	37	16	27476649	27476649	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	27476649	27476649	G	A	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	missense	c.5287	p.R1763C	0.438	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235				152	0	0	116	16	12.1212
APOBR	0	genome.wustl.edu	37	16	28507089	28507089	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	28507089	28507089	G	T	SNP	APOBR	ENST00000564831	human	ensembl	74_37	+1	known	missense	c.727	p.G243W	0.000	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730				19	0	0	4	3	42.8571
ATXN2L	0	genome.wustl.edu	37	16	28844506	28844506	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	28844506	28844506	G	A	SNP	ATXN2L	ENST00000395547	human	ensembl	74_37	+1	known	missense	c.1786	p.V596I	0.920	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2L	HGNC	ENSG00000168488				191	0	0	131	17	11.4865
ASPHD1	0	genome.wustl.edu	37	16	29912905	29912905	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	29912905	29912905	G	A	SNP	ASPHD1	ENST00000308748	human	ensembl	74_37	+1	known	missense	c.613	p.A205T	0.997	NULL	pfam_Asp_Arg_b-Hydrxlase	-	no_errors	ASPHD1	HGNC	ENSG00000174939				153	0	0	122	12	8.95522
TAOK2	0	genome.wustl.edu	37	16	29997869	29997869	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	29997869	29997869	C	A	SNP	TAOK2	ENST00000308893	human	ensembl	74_37	+1	known	missense	c.2276	p.P759H	0.989	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK2	HGNC	ENSG00000149930				180	1	0.552486	103	17	14.1667
PPP4C	0	genome.wustl.edu	37	16	30096043	30096043	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	30096043	30096043	G	A	SNP	PPP4C	ENST00000279387	human	ensembl	74_37	+1	known	missense	c.661	p.V221M	1.000	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP4C	HGNC	ENSG00000149923				176	0	0	144	25	14.7929
TBX6	0	genome.wustl.edu	37	16	30097591	30097591	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	30097591	30097591	G	A	SNP	TBX6	ENST00000279386	human	ensembl	74_37	-1	known	silent	c.1266	p.T422	0.303	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box,prints_TF_Brachyury	-	no_errors	TBX6	HGNC	ENSG00000149922				97	0	0	82	25	23.3645
PHKG2	0	genome.wustl.edu	37	16	30762576	30762576	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	30762576	30762576	G	A	SNP	PHKG2	ENST00000563588	human	ensembl	74_37	+1	known	missense	c.245	p.R82H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Phosph_kin_gamma,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PHKG2	HGNC	ENSG00000156873				71	0	0	60	8	11.7647
SETD1A	0	genome.wustl.edu	37	16	30977128	30977128	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	30977128	30977128	G	A	SNP	SETD1A	ENST00000262519	human	ensembl	74_37	+1	known	silent	c.1926	p.P642	0.004	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1A	HGNC	ENSG00000099381				43	0	0	33	8	19.5122
FUS	0	genome.wustl.edu	37	16	31196405	31196405	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	31196405	31196405	C	T	SNP	FUS	ENST00000254108	human	ensembl	74_37	+1	known	silent	c.669	p.G223	0.710	NULL	pfam_Znf_RanBP2,pfam_RRM_dom,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	FUS	HGNC	ENSG00000089280				20	0	0	14	5	26.3158
FUS	0	genome.wustl.edu	37	16	31196420	31196420	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	31196420	31196420	C	T	SNP	FUS	ENST00000254108	human	ensembl	74_37	+1	known	silent	c.684	p.G228	0.180	NULL	pfam_Znf_RanBP2,pfam_RRM_dom,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	FUS	HGNC	ENSG00000089280				29	0	0	12	7	36.8421
PYDC1	0	genome.wustl.edu	37	16	31228252	31228252	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	31228252	31228252	C	T	SNP	PYDC1	ENST00000302964	human	ensembl	74_37	-1	known	missense	c.98	p.R33H	0.000	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	-	no_errors	PYDC1	HGNC	ENSG00000169900				82	0	0	47	7	12.963
ITGAM	0	genome.wustl.edu	37	16	31342529	31342529	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	31342529	31342529	C	T	SNP	ITGAM	ENST00000544665	human	ensembl	74_37	+1	known	missense	c.3323	p.P1108L	0.484	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAM	HGNC	ENSG00000169896				62	0	0	44	10	18.5185
MEFV	0	genome.wustl.edu	37	16	3304219	3304219	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	3304219	3304219	C	T	SNP	MEFV	ENST00000219596	human	ensembl	74_37	-1	known	silent	c.849	p.P283	0.000	NULL	pfam_DAPIN,pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_DEATH-like_dom,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_DAPIN,pfscan_Znf_B-box,prints_Butyrophylin	-	no_errors	MEFV	HGNC	ENSG00000103313				181	0	0	95	27	22.1311
ZNF174	0	genome.wustl.edu	37	16	3458468	3458468	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	3458468	3458468	G	A	SNP	ZNF174	ENST00000268655	human	ensembl	74_37	+1	known	missense	c.773	p.R258Q	0.049	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF174	HGNC	ENSG00000103343				145	0	0	123	13	9.55882
CREBBP	0	genome.wustl.edu	37	16	3781384	3781384	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	3781384	3781384	T	C	SNP	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	missense	c.4981	p.M1661V	1.000	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339				23	0	0	18	4	18.1818
TMEM8A	0	genome.wustl.edu	37	16	425384	425384	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	425384	425384	G	A	SNP	TMEM8A	ENST00000431232	human	ensembl	74_37	-1	known	missense	c.1276	p.P426S	0.878	NULL	pfam_DUF3522,pfscan_EG-like_dom	-	no_errors	TMEM8A	HGNC	ENSG00000129925				121	1	0.819672	92	10	9.80392
CORO7-PAM16	0	genome.wustl.edu	37	16	4390324	4390324	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	4390324	4390324	G	A	SNP	CORO7-PAM16	ENST00000572467	human	ensembl	74_37	-1	known	missense	c.3143	p.T1048M	1.000	NULL	pfam_DUF1900,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO7-PAM16	HGNC	ENSG00000103426				170	0	0	97	25	20.4918
PHKB	0	genome.wustl.edu	37	16	47674948	47674948	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	47674948	47674948	C	T	SNP	PHKB	ENST00000299167	human	ensembl	74_37	+1	known	silent	c.1461	p.G487	0.872	pfam_Glyco_hydro_15	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKB	HGNC	ENSG00000102893				75	0	0	51	11	17.7419
UBN1	0	genome.wustl.edu	37	16	4911085	4911085	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	4911085	4911085	C	T	SNP	UBN1	ENST00000262376	human	ensembl	74_37	+1	known	silent	c.1092	p.R364	0.997	NULL	NULL	-	no_errors	UBN1	HGNC	ENSG00000118900				44	0	0	36	3	7.69231
CBLN1	0	genome.wustl.edu	37	16	49315263	49315263	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	49315263	49315263	G	A	SNP	CBLN1	ENST00000219197	human	ensembl	74_37	-1	known	silent	c.114	p.C38	1.000	NULL	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN1	HGNC	ENSG00000102924				53	0	0	32	4	11.1111
SALL1	0	genome.wustl.edu	37	16	51173541	51173541	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	51173541	51173541	A	G	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	silent	c.2592	p.A864	0.971	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449				115	0	0	73	13	15.1163
KIFC3	0	genome.wustl.edu	37	16	57794956	57794956	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	57794956	57794956	G	A	SNP	KIFC3	ENST00000379655	human	ensembl	74_37	-1	known	missense	c.2000	p.T667M	0.880	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIFC3	HGNC	ENSG00000140859				55	0	0	45	5	10
KIFC3	0	genome.wustl.edu	37	16	57828936	57828936	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	57828936	57828936	G	A	SNP	KIFC3	ENST00000379655	human	ensembl	74_37	-1	known	missense	c.290	p.P97L	0.990	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIFC3	HGNC	ENSG00000140859				40	0	0	26	6	18.75
CDH8	0	genome.wustl.edu	37	16	61687700	61687700	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	61687700	61687700	C	G	SNP	CDH8	ENST00000577390	human	ensembl	74_37	-1	known	missense	c.2212	p.A738P	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH8	HGNC	ENSG00000150394				105	1	0.943396	77	6	7.22892
CDH11	0	genome.wustl.edu	37	16	64984700	64984700	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	64984700	64984700	C	T	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.1864	p.A622T	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937				61	0	0	56	8	12.5
CES4A	0	genome.wustl.edu	37	16	67037006	67037006	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	67037006	67037006	C	T	SNP	CES4A	ENST00000326686	human	ensembl	74_37	+1	known	missense	c.724	p.R242W	0.877	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES4A	HGNC	ENSG00000172824				138	0	0	94	19	16.8142
EXOC3L1	0	genome.wustl.edu	37	16	67222722	67222722	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	67222722	67222722	A	G	SNP	EXOC3L1	ENST00000314586	human	ensembl	74_37	-1	known	missense	c.329	p.M110T	0.001	NULL	pfam_Sec6	-	no_errors	EXOC3L1	HGNC	ENSG00000179044				73	0	0	63	11	14.8649
TMEM208	0	genome.wustl.edu	37	16	67262891	67262891	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	67262891	67262891	G	A	SNP	TMEM208	ENST00000304800	human	ensembl	74_37	+1	known	missense	c.397	p.A133T	1.000	pfam_DUF788_TMEM208	pfam_DUF788_TMEM208	-	no_errors	TMEM208	HGNC	ENSG00000168701				144	0	0	103	6	5.50459
SLC9A5	0	genome.wustl.edu	37	16	67293845	67293845	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	67293845	67293845	G	A	SNP	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	missense	c.1838	p.R613H	1.000	prints_Na/H_exchanger_3/5,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740				56	0	0	32	7	17.9487
ATP6V0D1	0	genome.wustl.edu	37	16	67477083	67477083	+	Splice_Site	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	67477083	67477083	T	G	SNP	ATP6V0D1	ENST00000290949	human	ensembl	74_37	-1	known	splice_site	c.482-2	e4-2	1.000	-	-	-	no_errors	ATP6V0D1	HGNC	ENSG00000159720				96	0	0	67	9	11.8421
ATP6V0D1	0	genome.wustl.edu	37	16	67478439	67478439	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	67478439	67478439	G	A	SNP	ATP6V0D1	ENST00000290949	human	ensembl	74_37	-1	known	missense	c.473	p.T158M	1.000	pfam_ATPase_V0-cplx_csu/dsu,superfamily_ATPase_V0-cplx_csu/dsu,pirsf_ATPase_V0-cplx_dsu	pfam_ATPase_V0-cplx_csu/dsu,superfamily_ATPase_V0-cplx_csu/dsu,pirsf_ATPase_V0-cplx_dsu	-	no_errors	ATP6V0D1	HGNC	ENSG00000159720				81	0	0	46	15	24.5902
HAS3	0	genome.wustl.edu	37	16	69148385	69148385	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	69148385	69148385	G	C	SNP	HAS3	ENST00000306560	human	ensembl	74_37	+1	known	missense	c.878	p.S293T	1.000	pfam_Chitin_synth_fng,pfam_Glyco_trans_2	pfam_Chitin_synth_fng,pfam_Glyco_trans_2	-	no_errors	HAS3	HGNC	ENSG00000103044				114	0	0	88	17	16.1905
NFAT5	0	genome.wustl.edu	37	16	69727392	69727392	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	69727392	69727392	C	T	SNP	NFAT5	ENST00000432919	human	ensembl	74_37	+1	known	missense	c.3664	p.P1222S	0.158	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFAT5	HGNC	ENSG00000102908				161	0	0	85	18	17.4757
DDX19B	0	genome.wustl.edu	37	16	70359496	70359496	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	70359496	70359496	C	T	SNP	DDX19B	ENST00000288071	human	ensembl	74_37	+1	known	missense	c.512	p.T171M	0.996	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX19B	HGNC	ENSG00000157349				156	0	0	135	32	19.1617
VAC14	0	genome.wustl.edu	37	16	70765531	70765531	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	70765531	70765531	C	A	SNP	VAC14	ENST00000261776	human	ensembl	74_37	-1	known	splice_site	c.1529-1	e14-1	1.000	-	-	-	no_errors	VAC14	HGNC	ENSG00000103043				189	0	0	139	10	6.71141
MAF	0	genome.wustl.edu	37	16	79632973	79632973	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	79632973	79632973	C	T	SNP	MAF	ENST00000326043	human	ensembl	74_37	-1	known	missense	c.827	p.R276Q	1.000	pfam_bZIP_Maf,superfamily_TF_DNA-bd	pfam_bZIP_Maf,pfam_Maf_TF_N,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	MAF	HGNC	ENSG00000178573				36	0	0	21	3	12.5
CMIP	0	genome.wustl.edu	37	16	81641248	81641248	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	81641248	81641248	C	T	SNP	CMIP	ENST00000537098	human	ensembl	74_37	+1	known	missense	c.377	p.P126L	1.000	NULL	NULL	-	no_errors	CMIP	HGNC	ENSG00000153815				115	0	0	66	18	21.4286
MSLN	0	genome.wustl.edu	37	16	816414	816414	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	816414	816414	G	A	SNP	MSLN	ENST00000382862	human	ensembl	74_37	+1	known	missense	c.1154	p.R385H	0.004	pfam_Mesothelin	pfam_Mesothelin	-	no_errors	MSLN	HGNC	ENSG00000102854				121	0	0	87	29	25
CMIP	0	genome.wustl.edu	37	16	81712192	81712192	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	81712192	81712192	C	T	SNP	CMIP	ENST00000537098	human	ensembl	74_37	+1	known	silent	c.1347	p.A449	0.785	NULL	NULL	-	no_errors	CMIP	HGNC	ENSG00000153815				21	0	0	15	3	16.6667
TLDC1	0	genome.wustl.edu	37	16	84520283	84520283	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	84520283	84520283	G	A	SNP	TLDC1	ENST00000343629	human	ensembl	74_37	-1	known	silent	c.912	p.F304	0.514	pfam_TLDc,smart_TLDc	pfam_TLDc,smart_TLDc	-	no_errors	TLDC1	HGNC	ENSG00000140950				111	0	0	57	21	26.9231
KIAA0513	0	genome.wustl.edu	37	16	85112049	85112049	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	85112049	85112049	C	T	SNP	KIAA0513	ENST00000258180	human	ensembl	74_37	+1	known	missense	c.811	p.R271W	0.985	NULL	pfam_SBF2	-	no_errors	KIAA0513	HGNC	ENSG00000135709				40	0	0	31	6	16.2162
GSE1	0	genome.wustl.edu	37	16	85701857	85701857	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	85701857	85701857	G	T	SNP	GSE1	ENST00000253458	human	ensembl	74_37	+1	known	missense	c.3242	p.G1081V	1.000	NULL	pfam_GSE-like	-	no_errors	GSE1	HGNC	ENSG00000131149				161	0	0	93	12	11.4286
METTL22	0	genome.wustl.edu	37	16	8719648	8719648	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	8719648	8719648	G	A	SNP	METTL22	ENST00000381920	human	ensembl	74_37	+1	known	silent	c.126	p.G42	0.994	NULL	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL22	HGNC	ENSG00000067365				150	0	0	142	9	5.96026
ZC3H18	0	genome.wustl.edu	37	16	88666260	88666260	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	88666260	88666260	C	T	SNP	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	missense	c.992	p.T331M	0.996	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545				254	1	0.392157	131	37	22.0238
CTU2	0	genome.wustl.edu	37	16	88781638	88781638	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	88781638	88781638	C	T	SNP	CTU2	ENST00000567949	human	ensembl	74_37	+1	known	silent	c.1740	p.D580	0.000	NULL	pfam_Thiouridylase_cyt_su2	-	no_errors	CTU2	HGNC	ENSG00000174177				65	0	0	55	4	6.77966
CDH15	0	genome.wustl.edu	37	16	89245841	89245841	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	89245841	89245841	G	T	SNP	CDH15	ENST00000289746	human	ensembl	74_37	+1	known	missense	c.60	p.L20F	0.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH15	HGNC	ENSG00000129910				122	0	0	91	16	14.9533
CDH15	0	genome.wustl.edu	37	16	89254627	89254627	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	89254627	89254627	C	T	SNP	CDH15	ENST00000289746	human	ensembl	74_37	+1	known	silent	c.912	p.D304	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH15	HGNC	ENSG00000129910				36	0	0	29	4	12.1212
GRIN2A	0	genome.wustl.edu	37	16	9858518	9858518	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	9858518	9858518	G	A	SNP	GRIN2A	ENST00000330684	human	ensembl	74_37	-1	known	silent	c.2883	p.N961	0.988	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454				165	0	0	123	13	9.55882
DNAH9	0	genome.wustl.edu	37	17	11840771	11840771	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	11840771	11840771	A	G	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.12592	p.T4198A	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				128	0	0	65	24	26.9663
INPP5K	0	genome.wustl.edu	37	17	1410361	1410361	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	1410361	1410361	T	C	SNP	INPP5K	ENST00000421807	human	ensembl	74_37	-1	known	missense	c.689	p.D230G	0.992	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	-	no_errors	INPP5K	HGNC	ENSG00000132376				62	0	0	36	9	20
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				101	0	0	89	16	15.2381
PRPF8	0	genome.wustl.edu	37	17	1579520	1579520	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	1579520	1579520	G	A	SNP	PRPF8	ENST00000304992	human	ensembl	74_37	-1	known	missense	c.2533	p.R845W	1.000	NULL	pfam_PROCN,pfam_PRP8_domainIV,pfam_Prp8_U6-snRNA-bd,pfam_PRO8NT,pfam_Prp8_U5-snRNA-bd,pfam_PROCT,pfam_RRM_spliceosomal_PrP8,pfam_JAB_MPN_dom,superfamily_Cupredoxin,superfamily_Histone-fold,smart_JAB_MPN_dom	-	no_errors	PRPF8	HGNC	ENSG00000174231				185	0	0	132	19	12.5828
SREBF1	0	genome.wustl.edu	37	17	17720296	17720296	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	17720296	17720296	C	G	SNP	SREBF1	ENST00000355815	human	ensembl	74_37	-1	known	missense	c.1851	p.K617N	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SREBF1	HGNC	ENSG00000072310				122	0	0	96	9	8.57143
TOM1L2	0	genome.wustl.edu	37	17	17754260	17754260	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	17754260	17754260	C	T	SNP	TOM1L2	ENST00000379504	human	ensembl	74_37	-1	known	missense	c.1285	p.V429I	1.000	pirsf_TOM1	pfam_VHS,pfam_GAT,superfamily_ENTH_VHS,smart_VHS_subgr,pirsf_TOM1,pfscan_GAT,pfscan_VHS	-	no_errors	TOM1L2	HGNC	ENSG00000175662				125	0	0	93	14	13.0841
MYO15A	0	genome.wustl.edu	37	17	18054563	18054563	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	18054563	18054563	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.7613	p.A2538V	0.990	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				161	0	0	107	12	10.084
LLGL1	0	genome.wustl.edu	37	17	18145266	18145266	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	18145266	18145266	G	T	SNP	LLGL1	ENST00000316843	human	ensembl	74_37	+1	known	silent	c.2835	p.P945	0.083	NULL	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL1	HGNC	ENSG00000131899				135	0	0	80	25	23.8095
RTN4RL1	0	genome.wustl.edu	37	17	1840254	1840254	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	1840254	1840254	G	A	SNP	RTN4RL1	ENST00000331238	human	ensembl	74_37	-1	known	missense	c.862	p.R288W	0.000	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	RTN4RL1	HGNC	ENSG00000185924				33	0	0	9	3	25
MFAP4	0	genome.wustl.edu	37	17	19287914	19287914	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	19287914	19287914	C	T	SNP	MFAP4	ENST00000395592	human	ensembl	74_37	-1	known	missense	c.701	p.R234H	0.461	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	MFAP4	HGNC	ENSG00000166482				121	0	0	58	12	17.1429
KCNJ12	0	genome.wustl.edu	37	17	21319768	21319768	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	21319768	21319768	G	A	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.1114	p.A372T	0.996	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185				170	0	0	108	13	10.7438
UBBP4	0	genome.wustl.edu	37	17	21731270	21731270	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	21731270	21731270	T	C	SNP	UBBP4	ENST00000584755	human	ensembl	74_37	+1	novel	missense	c.572	p.I191T	1.000	smart_Ubiquitin_dom	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBBP4	HGNC	ENSG00000263563				105	0	0	103	13	11.2069
KSR1	0	genome.wustl.edu	37	17	25783858	25783858	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	25783858	25783858	T	C	SNP	KSR1	ENST00000319524	human	ensembl	74_37	+1	known	silent	c.189	p.A63	0.748	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	KSR1	HGNC	ENSG00000141068				58	0	0	45	7	13.4615
NOS2	0	genome.wustl.edu	37	17	26106007	26106007	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	26106007	26106007	G	A	SNP	NOS2	ENST00000313735	human	ensembl	74_37	-1	known	silent	c.1080	p.G360	0.642	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS2	HGNC	ENSG00000007171				127	0	0	92	10	9.80392
SLC46A1	0	genome.wustl.edu	37	17	26731940	26731940	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	26731940	26731940	C	T	SNP	SLC46A1	ENST00000440501	human	ensembl	74_37	-1	known	missense	c.775	p.A259T	0.003	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC46A1	HGNC	ENSG00000076351				182	0	0	134	10	6.94444
MYO18A	0	genome.wustl.edu	37	17	27493495	27493495	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	27493495	27493495	G	A	SNP	MYO18A	ENST00000354329	human	ensembl	74_37	-1	known	missense	c.464	p.T155M	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_PDZ,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_Regulat_G_prot_signal_superfam,smart_PDZ,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_PDZ,pfscan_RecA_monomer-monomer_interface,prints_Myosin_head_motor_dom	-	no_errors	MYO18A	HGNC	ENSG00000196535				43	0	0	37	3	7.5
NF1	0	genome.wustl.edu	37	17	29552151	29552151	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	29552151	29552151	C	T	SNP	NF1	ENST00000358273	human	ensembl	74_37	+1	known	silent	c.1884	p.Y628	1.000	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				189	0	0	129	26	16.7742
SUZ12	0	genome.wustl.edu	37	17	30322710	30322710	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	30322710	30322710	C	T	SNP	SUZ12	ENST00000322652	human	ensembl	74_37	+1	known	missense	c.1723	p.R575C	1.000	pfam_Polycomb_protein_VEFS-Box	pfam_Polycomb_protein_VEFS-Box	-	no_errors	SUZ12	HGNC	ENSG00000178691				75	0	0	47	5	9.61538
GGNBP2	0	genome.wustl.edu	37	17	34934411	34934411	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	34934411	34934411	A	G	SNP	GGNBP2	ENST00000304718	human	ensembl	74_37	+1	known	splice_site	c.642-2	e6-2	1.000	-	-	-	no_errors	GGNBP2	HGNC	ENSG00000005955				73	0	0	65	9	12.1622
HNF1B	0	genome.wustl.edu	37	17	36099531	36099531	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	36099531	36099531	C	T	SNP	HNF1B	ENST00000225893	human	ensembl	74_37	-1	known	silent	c.444	p.S148	0.006	pfam_HNF-1_N,superfamily_Lambda_DNA-bd_dom	pfam_HNF1b_C,pfam_HNF-1_N,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1B	HGNC	ENSG00000108753				116	0	0	64	17	20.9877
ITGAE	0	genome.wustl.edu	37	17	3651342	3651342	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	3651342	3651342	G	A	SNP	ITGAE	ENST00000263087	human	ensembl	74_37	-1	known	missense	c.2029	p.R677W	0.971	pfam_Integrin_alpha-2,smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_VWF_A,smart_Int_alpha_beta-p,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAE	HGNC	ENSG00000083457				80	0	0	69	7	9.21053
MLLT6	0	genome.wustl.edu	37	17	36872882	36872882	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	36872882	36872882	G	A	SNP	MLLT6	ENST00000325718	human	ensembl	74_37	+1	known	silent	c.1299	p.T433	0.000	NULL	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT6	HGNC	ENSG00000108292				55	0	0	36	7	16.2791
KRTAP4-8	0	genome.wustl.edu	37	17	39253886	39253886	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	39253886	39253886	G	C	SNP	KRTAP4-8	ENST00000333822	human	ensembl	74_37	-1	known	missense	c.451	p.L151V	0.001	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-8	HGNC	ENSG00000204880				18	0	0	8	3	27.2727
KRT16	0	genome.wustl.edu	37	17	39767710	39767710	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	39767710	39767710	C	T	SNP	KRT16	ENST00000301653	human	ensembl	74_37	-1	known	missense	c.658	p.V220I	1.000	pfam_IF,prints_Keratin_I	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT16	HGNC	ENSG00000186832				117	0	0	85	28	24.7788
JUP	0	genome.wustl.edu	37	17	39777909	39777909	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	39777909	39777909	C	T	SNP	JUP	ENST00000540235	human	ensembl	74_37	-1	known	missense	c.1247	p.R416H	1.000	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	pfam_IF,pfam_Armadillo,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Armadillo,pfscan_Armadillo,prints_Keratin_I,prints_Beta-catenin	-	no_errors	JUP	HGNC	ENSG00000173801				149	0	0	82	22	21.1538
KAT2A	0	genome.wustl.edu	37	17	40272728	40272728	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	40272728	40272728	G	T	SNP	KAT2A	ENST00000225916	human	ensembl	74_37	-1	known	silent	c.459	p.P153	0.808	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom,prints_Bromodomain	-	no_errors	KAT2A	HGNC	ENSG00000108773				217	0	0	167	19	10.2151
BRCA1	0	genome.wustl.edu	37	17	41244889	41244889	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	41244889	41244889	C	T	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	missense	c.2659	p.A887T	0.000	pirsf_BRCA1	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048				135	0	0	85	17	16.6667
ATXN7L3	0	genome.wustl.edu	37	17	42272803	42272803	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	42272803	42272803	C	T	SNP	ATXN7L3	ENST00000454077	human	ensembl	74_37	-1	known	missense	c.626	p.R209H	0.931	NULL	pfam_SAGA_su_Sgf11,pfam_SCA7_dom	-	no_errors	ATXN7L3	HGNC	ENSG00000087152				117	0	0	56	6	9.67742
C1QL1	0	genome.wustl.edu	37	17	43037709	43037709	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	43037709	43037709	G	A	SNP	C1QL1	ENST00000253407	human	ensembl	74_37	-1	known	silent	c.624	p.D208	0.999	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QL1	HGNC	ENSG00000131094				83	0	0	47	9	16.0714
CRHR1	0	genome.wustl.edu	37	17	43907907	43907907	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	43907907	43907907	G	A	SNP	CRHR1	ENST00000398285	human	ensembl	74_37	+1	known	missense	c.767	p.R256H	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF1_rcpt,prints_GPCR_2_diuretic_rcpt	-	no_errors	CRHR1	HGNC	ENSG00000120088				178	0	0	133	10	6.99301
SMTNL2	0	genome.wustl.edu	37	17	4510676	4510676	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	4510676	4510676	G	A	SNP	SMTNL2	ENST00000389313	human	ensembl	74_37	+1	known	missense	c.1280	p.R427H	1.000	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTNL2	HGNC	ENSG00000188176				328	0	0	240	49	16.955
NFE2L1	0	genome.wustl.edu	37	17	46136685	46136685	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	46136685	46136685	G	A	SNP	NFE2L1	ENST00000362042	human	ensembl	74_37	+1	known	silent	c.2001	p.A667	0.325	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L1	HGNC	ENSG00000082641				93	0	0	71	12	14.4578
HOXB5	0	genome.wustl.edu	37	17	46670721	46670721	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	46670721	46670721	G	A	SNP	HOXB5	ENST00000239151	human	ensembl	74_37	-1	known	silent	c.324	p.H108	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXB5	HGNC	ENSG00000120075				56	0	0	32	10	23.8095
HOXB6	0	genome.wustl.edu	37	17	46673804	46673804	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	46673804	46673804	C	T	SNP	HOXB6	ENST00000225648	human	ensembl	74_37	-1	known	missense	c.646	p.E216K	0.998	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXB6	HGNC	ENSG00000108511				336	0	0	178	76	29.9213
NGFR	0	genome.wustl.edu	37	17	47583740	47583740	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	47583740	47583740	G	A	SNP	NGFR	ENST00000172229	human	ensembl	74_37	+1	known	silent	c.288	p.S96	0.082	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_16	-	no_errors	NGFR	HGNC	ENSG00000064300				72	0	0	28	5	15.1515
EPN3	0	genome.wustl.edu	37	17	48613990	48613990	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	48613990	48613990	C	T	SNP	EPN3	ENST00000268933	human	ensembl	74_37	+1	known	missense	c.73	p.R25C	1.000	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	pfam_Epsin_dom_N,pfam_Ubiquitin-int_motif,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN3	HGNC	ENSG00000049283				125	0	0	67	20	22.9885
ABCC3	0	genome.wustl.edu	37	17	48742598	48742598	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	48742598	48742598	G	A	SNP	ABCC3	ENST00000285238	human	ensembl	74_37	+1	known	missense	c.1423	p.A475T	0.965	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC3	HGNC	ENSG00000108846				72	0	0	39	12	23.5294
CA10	0	genome.wustl.edu	37	17	50212314	50212314	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	50212314	50212314	C	T	SNP	CA10	ENST00000340813	human	ensembl	74_37	-1	known	missense	c.4	p.A2T	0.004	NULL	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA10	HGNC	ENSG00000154975				59	0	0	39	10	20.4082
ZNF594	0	genome.wustl.edu	37	17	5085407	5085407	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	5085407	5085407	T	C	SNP	ZNF594	ENST00000399604	human	ensembl	74_37	-1	known	silent	c.2145	p.K715	0.612	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF594	HGNC	ENSG00000180626				192	0	0	108	39	26.5306
MRC2	0	genome.wustl.edu	37	17	60768086	60768086	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	60768086	60768086	C	T	SNP	MRC2	ENST00000303375	human	ensembl	74_37	+1	known	missense	c.3976	p.R1326W	0.946	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin,prints_AntifreezeII	-	no_errors	MRC2	HGNC	ENSG00000011028				66	0	0	46	12	20.6897
SLC16A6P1	0	genome.wustl.edu	37	17	62950457	62950457	+	RNA	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	62950457	62950457	C	T	SNP	SLC16A6P1	ENST00000577423	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.910	-	-	-	no_errors	SLC16A6P1	HGNC	ENSG00000232457				97	0	0	62	19	23.4568
KPNA2	0	genome.wustl.edu	37	17	66033572	66033572	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	66033572	66033572	T	C	SNP	KPNA2	ENST00000330459	human	ensembl	74_37	+1	known	silent	c.174	p.D58	1.000	pfam_Importin-a_IBB,superfamily_ARM-type_fold,pfscan_Importin-a_IBB	pfam_Armadillo,pfam_Importin-a_IBB,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA2	HGNC	ENSG00000182481				127	0	0	98	8	7.54717
PRKAR1A	0	genome.wustl.edu	37	17	66511558	66511558	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	66511558	66511558	C	T	SNP	PRKAR1A	ENST00000358598	human	ensembl	74_37	+1	known	silent	c.18	p.T6	0.200	pirsf_cAMP_dep_PK_reg_su	pfam_cNMP-bd_dom,pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cNMP-bd-like,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	-	no_errors	PRKAR1A	HGNC	ENSG00000108946				65	0	0	47	15	24.1935
KCNJ16	0	genome.wustl.edu	37	17	68128882	68128882	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	68128882	68128882	C	T	SNP	KCNJ16	ENST00000283936	human	ensembl	74_37	+1	known	silent	c.654	p.A218	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir5,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ16	HGNC	ENSG00000153822				93	0	0	69	19	21.5909
BCL6B	0	genome.wustl.edu	37	17	6927490	6927490	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	6927490	6927490	G	A	SNP	BCL6B	ENST00000293805	human	ensembl	74_37	+1	known	missense	c.268	p.A90T	0.984	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	BCL6B	HGNC	ENSG00000161940				238	0	0	170	18	9.57447
HN1	0	genome.wustl.edu	37	17	73144758	73144758	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	73144758	73144758	C	T	SNP	HN1	ENST00000356033	human	ensembl	74_37	-1	known	missense	c.65	p.R22Q	1.000	NULL	NULL	-	no_errors	HN1	HGNC	ENSG00000189159				49	0	0	40	5	11.1111
ST6GALNAC2	0	genome.wustl.edu	37	17	74562348	74562348	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	74562348	74562348	A	G	SNP	ST6GALNAC2	ENST00000225276	human	ensembl	74_37	-1	known	silent	c.963	p.S321	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST6GALNAC2	HGNC	ENSG00000070731				180	0	0	108	37	25.5172
TP53	0	genome.wustl.edu	37	17	7579313	7579313	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	7579313	7579313	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.374	p.T125M	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				108	0	0	96	18	15.7895
CANT1	0	genome.wustl.edu	37	17	76989922	76989922	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	76989922	76989922	G	A	SNP	CANT1	ENST00000302345	human	ensembl	74_37	-1	known	missense	c.916	p.R306C	1.000	pfam_Apyrase,superfamily_Apyrase	pfam_Apyrase,superfamily_Apyrase	-	no_errors	CANT1	HGNC	ENSG00000171302				35	0	0	23	2	8
TBC1D16	0	genome.wustl.edu	37	17	77926601	77926601	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	77926601	77926601	C	T	SNP	TBC1D16	ENST00000310924	human	ensembl	74_37	-1	known	missense	c.796	p.D266N	0.984	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D16	HGNC	ENSG00000167291				84	0	0	69	14	16.8675
RPTOR	0	genome.wustl.edu	37	17	78865536	78865536	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	78865536	78865536	T	C	SNP	RPTOR	ENST00000306801	human	ensembl	74_37	+1	known	missense	c.2000	p.L667P	1.000	superfamily_ARM-type_fold	pfam_HEAT,pfam_WD40_repeat,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Raptor	-	no_errors	RPTOR	HGNC	ENSG00000141564				232	0	0	176	24	12
CHMP6	0	genome.wustl.edu	37	17	78971112	78971112	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	78971112	78971112	A	G	SNP	CHMP6	ENST00000325167	human	ensembl	74_37	+1	known	missense	c.466	p.I156V	1.000	pfam_Snf7	pfam_Snf7	-	no_errors	CHMP6	HGNC	ENSG00000176108				61	0	0	43	16	27.1186
ALOX15B	0	genome.wustl.edu	37	17	7942761	7942761	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	7942761	7942761	G	A	SNP	ALOX15B	ENST00000380183	human	ensembl	74_37	+1	known	missense	c.205	p.V69M	0.327	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C	-	no_errors	ALOX15B	HGNC	ENSG00000179593				30	0	0	15	6	28.5714
CCDC137	0	genome.wustl.edu	37	17	79637353	79637353	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	79637353	79637353	G	A	SNP	CCDC137	ENST00000329214	human	ensembl	74_37	+1	known	missense	c.367	p.G123R	0.000	NULL	NULL	-	no_errors	CCDC137	HGNC	ENSG00000185298				57	0	0	53	5	8.62069
ALOX12B	0	genome.wustl.edu	37	17	7976517	7976517	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	7976517	7976517	C	T	SNP	ALOX12B	ENST00000319144	human	ensembl	74_37	-1	known	silent	c.1875	p.T625	0.022	pfam_LipOase_C,superfamily_LipOase_C,prints_LipOase_mml	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477				307	1	0.324675	198	33	14.2857
PPP1R27	0	genome.wustl.edu	37	17	79792774	79792774	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	79792774	79792774	C	T	SNP	PPP1R27	ENST00000330261	human	ensembl	74_37	-1	known	missense	c.56	p.R19Q	0.046	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R27	HGNC	ENSG00000182676				50	0	0	32	3	8.57143
ARHGEF15	0	genome.wustl.edu	37	17	8221898	8221898	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	8221898	8221898	G	A	SNP	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	missense	c.1790	p.R597H	0.960	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844				84	0	0	44	10	18.5185
ARHGEF15	0	genome.wustl.edu	37	17	8222917	8222917	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	8222917	8222917	T	C	SNP	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	silent	c.2370	p.P790	0.683	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844				177	0	0	108	8	6.89655
GAS7	0	genome.wustl.edu	37	17	9873070	9873070	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	9873070	9873070	T	C	SNP	GAS7	ENST00000432992	human	ensembl	74_37	-1	known	missense	c.395	p.Y132C	1.000	NULL	pfam_FCH_dom,pfam_WW_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_WW_dom,smart_SH3_domain,smart_WW_dom,smart_FCH_dom,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_WW_dom	-	no_errors	GAS7	HGNC	ENSG00000007237				107	1	0.925926	93	21	18.4211
OSBPL1A	0	genome.wustl.edu	37	18	21759794	21759794	+	Silent	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	21759794	21759794	T	G	SNP	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	silent	c.1818	p.V606	0.718	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447				45	0	0	35	3	7.89474
TAF4B	0	genome.wustl.edu	37	18	23866046	23866046	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	23866046	23866046	G	A	SNP	TAF4B	ENST00000269142	human	ensembl	74_37	+1	known	silent	c.1173	p.V391	0.992	NULL	pfam_TAF4,pfam_TAFH_NHR1,superfamily_Histone-fold,smart_TAFH_NHR1,pfscan_TAFH_NHR1	-	no_errors	TAF4B	HGNC	ENSG00000141384				125	0	0	93	20	17.6991
GAREM	0	genome.wustl.edu	37	18	29867794	29867794	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	29867794	29867794	G	A	SNP	GAREM	ENST00000269209	human	ensembl	74_37	-1	known	missense	c.766	p.P256S	1.000	NULL	superfamily_SAM/pointed	-	no_errors	GAREM	HGNC	ENSG00000141441				170	0	0	110	17	13.3858
SLC14A2	0	genome.wustl.edu	37	18	43248435	43248435	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	43248435	43248435	A	G	SNP	SLC14A2	ENST00000255226	human	ensembl	74_37	+1	known	missense	c.2029	p.M677V	1.000	pfam_Urea_transporter	pfam_Urea_transporter	-	no_errors	SLC14A2	HGNC	ENSG00000132874				71	0	0	59	9	13.2353
EPB41L3	0	genome.wustl.edu	37	18	5419778	5419778	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	5419778	5419778	C	T	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	missense	c.1438	p.E480K	0.931	pirsf_Band_41_protein	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397				108	1	0.917431	46	16	25.8065
ALPK2	0	genome.wustl.edu	37	18	56149219	56149219	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	56149219	56149219	C	A	SNP	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	missense	c.6349	p.A2117S	1.000	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796				158	0	0	127	13	9.28571
TMEM200C	0	genome.wustl.edu	37	18	5891517	5891517	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	5891517	5891517	G	A	SNP	TMEM200C	ENST00000383490	human	ensembl	74_37	-1	known	silent	c.546	p.C182	1.000	pfam_DUF2371_TMEM200	pfam_DUF2371_TMEM200	-	no_errors	TMEM200C	HGNC	ENSG00000206432				33	0	0	26	4	13.3333
TMX3	0	genome.wustl.edu	37	18	66358524	66358524	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	66358524	66358524	G	A	SNP	TMX3	ENST00000443099	human	ensembl	74_37	-1	putative	silent	c.564	p.F188	0.000	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin	-	no_errors	TMX3	HGNC	ENSG00000166479				29	0	0	18	3	14.2857
NETO1	0	genome.wustl.edu	37	18	70534535	70534535	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	70534535	70534535	G	A	SNP	NETO1	ENST00000579730	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NETO1	HGNC	ENSG00000166342				27	0	0	14	6	30
ZNF516	0	genome.wustl.edu	37	18	74153912	74153912	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	74153912	74153912	C	T	SNP	ZNF516	ENST00000443185	human	ensembl	74_37	-1	known	missense	c.1099	p.A367T	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF516	HGNC	ENSG00000101493				43	0	0	21	6	22.2222
SALL3	0	genome.wustl.edu	37	18	76754898	76754898	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	76754898	76754898	G	T	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.2907	p.R969S	0.995	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				34	0	0	15	4	21.0526
KCNG2	0	genome.wustl.edu	37	18	77623823	77623823	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	77623823	77623823	C	T	SNP	KCNG2	ENST00000316249	human	ensembl	74_37	+1	known	silent	c.156	p.H52	0.985	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv9	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNG2	HGNC	ENSG00000178342				15	0	0	12	4	25
SOGA2	0	genome.wustl.edu	37	18	8825914	8825914	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	8825914	8825914	G	A	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	missense	c.4406	p.R1469Q	0.995	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502				75	0	0	49	11	18.3333
DNM2	0	genome.wustl.edu	37	19	10906072	10906072	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	10906072	10906072	C	T	SNP	DNM2	ENST00000314646	human	ensembl	74_37	+1	known	nonsense	c.1153	p.R385*	0.011	pfam_Dynamin_central	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM2	HGNC	ENSG00000079805				132	0	0	123	14	10.219
CCDC151	0	genome.wustl.edu	37	19	11531506	11531506	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	11531506	11531506	G	T	SNP	CCDC151	ENST00000356392	human	ensembl	74_37	-1	known	silent	c.1785	p.S595	0.118	NULL	NULL	-	no_errors	CCDC151	HGNC	ENSG00000198003				86	0	0	42	16	27.5862
CIRBP	0	genome.wustl.edu	37	19	1272348	1272348	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	1272348	1272348	G	A	SNP	CIRBP	ENST00000444172	human	ensembl	74_37	+1	known	missense	c.641	p.R214H	0.119	NULL	NULL	-	no_errors	CIRBP	HGNC	ENSG00000099622				106	0	0	69	25	26.5957
TNPO2	0	genome.wustl.edu	37	19	12812592	12812592	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	12812592	12812592	C	T	SNP	TNPO2	ENST00000425528	human	ensembl	74_37	-1	known	missense	c.2485	p.G829S	1.000	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	TNPO2	HGNC	ENSG00000105576				146	0	0	102	10	8.92857
MAST1	0	genome.wustl.edu	37	19	12985260	12985260	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	12985260	12985260	G	A	SNP	MAST1	ENST00000251472	human	ensembl	74_37	+1	known	missense	c.4289	p.G1430D	0.785	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST1	HGNC	ENSG00000105613				69	0	0	54	6	10
NACC1	0	genome.wustl.edu	37	19	13249068	13249068	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	13249068	13249068	A	G	SNP	NACC1	ENST00000292431	human	ensembl	74_37	+1	known	missense	c.1432	p.K478E	1.000	NULL	pfam_BTB_POZ,pfam_BEN_domain,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	NACC1	HGNC	ENSG00000160877				285	0	0	136	37	21.3873
ILVBL	0	genome.wustl.edu	37	19	15226969	15226969	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	15226969	15226969	C	T	SNP	ILVBL	ENST00000263383	human	ensembl	74_37	-1	known	missense	c.1465	p.D489N	0.998	pfam_TPP_enzyme-bd_C	pfam_Thiamin_PyroP_enz_TPP-bd_dom,pfam_TPP_enzyme-bd_C,pfam_Thiamin_PyroP_enz_cen_dom	-	no_errors	ILVBL	HGNC	ENSG00000105135				94	0	0	53	14	20.8955
NOTCH3	0	genome.wustl.edu	37	19	15281358	15281358	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	15281358	15281358	G	A	SNP	NOTCH3	ENST00000263388	human	ensembl	74_37	-1	known	missense	c.4898	p.P1633L	0.152	pirsf_Notch,pfam_Notch_NODP_dom,prints_Notch_3	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_3,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181				41	0	0	16	6	27.2727
WIZ	0	genome.wustl.edu	37	19	15533994	15533994	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	15533994	15533994	G	A	SNP	WIZ	ENST00000389282	human	ensembl	74_37	-1	known	missense	c.4849	p.R1617W	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	WIZ	HGNC	ENSG00000011451				65	0	0	37	7	15.9091
PGLYRP2	0	genome.wustl.edu	37	19	15586525	15586525	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	15586525	15586525	C	T	SNP	PGLYRP2	ENST00000292609	human	ensembl	74_37	-1	known	missense	c.956	p.R319Q	1.000	NULL	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP2	HGNC	ENSG00000161031				61	0	0	38	14	26.9231
CYP4F22	0	genome.wustl.edu	37	19	15661545	15661545	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	15661545	15661545	G	A	SNP	CYP4F22	ENST00000269703	human	ensembl	74_37	+1	known	missense	c.1396	p.V466M	0.024	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F22	HGNC	ENSG00000171954				143	0	0	126	10	7.35294
ANO8	0	genome.wustl.edu	37	19	17442127	17442127	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	17442127	17442127	G	A	SNP	ANO8	ENST00000159087	human	ensembl	74_37	-1	known	missense	c.680	p.A227V	0.999	NULL	pfam_Anoctamin	-	no_errors	ANO8	HGNC	ENSG00000074855				97	0	0	69	6	8
FAM129C	0	genome.wustl.edu	37	19	17664122	17664122	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	17664122	17664122	C	T	SNP	FAM129C	ENST00000335393	human	ensembl	74_37	+1	known	missense	c.1844	p.A615V	0.077	NULL	smart_Pleckstrin_homology	-	no_errors	FAM129C	HGNC	ENSG00000167483				214	0	0	146	33	18.4358
ATP8B3	0	genome.wustl.edu	37	19	1796868	1796868	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	1796868	1796868	T	C	SNP	ATP8B3	ENST00000539485	human	ensembl	74_37	-1	known	missense	c.1595	p.Y532C	0.006	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B3	HGNC	ENSG00000130270				53	0	0	32	5	13.5135
PIK3R2	0	genome.wustl.edu	37	19	18278091	18278091	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	18278091	18278091	C	T	SNP	PIK3R2	ENST00000222254	human	ensembl	74_37	+1	known	missense	c.1711	p.R571C	1.000	prints_PI3kinase_P85	pfam_SH2,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_SH3_domain,smart_RhoGAP_dom,smart_SH2,pfscan_SH2,pfscan_SH3_domain,pfscan_RhoGAP_dom,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R2	HGNC	ENSG00000105647				118	0	0	77	12	13.4831
UPF1	0	genome.wustl.edu	37	19	18967816	18967816	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	18967816	18967816	T	C	SNP	UPF1	ENST00000599848	human	ensembl	74_37	+1	known	missense	c.1988	p.L663P	0.994	superfamily_P-loop_NTPase	pfam_RNA-helicase_UPF1_UPF2-interct,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase	-	no_errors	UPF1	HGNC	ENSG00000005007				171	1	0.581395	116	32	21.6216
CSNK1G2	0	genome.wustl.edu	37	19	1969862	1969862	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	1969862	1969862	C	T	SNP	CSNK1G2	ENST00000255641	human	ensembl	74_37	+1	known	missense	c.91	p.R31W	0.920	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Casein_kinase-1_gamma_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK1G2	HGNC	ENSG00000133275				40	0	0	29	4	12.1212
GMIP	0	genome.wustl.edu	37	19	19744697	19744697	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	19744697	19744697	T	C	SNP	GMIP	ENST00000203556	human	ensembl	74_37	-1	known	missense	c.2387	p.Q796R	0.013	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	GMIP	HGNC	ENSG00000089639				25	0	0	9	3	25
ATP13A1	0	genome.wustl.edu	37	19	19765378	19765378	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	19765378	19765378	G	A	SNP	ATP13A1	ENST00000357324	human	ensembl	74_37	-1	known	missense	c.1787	p.T596M	0.998	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A1	HGNC	ENSG00000105726				71	0	0	44	11	20
CSNK1G2	0	genome.wustl.edu	37	19	1979024	1979024	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	1979024	1979024	C	T	SNP	CSNK1G2	ENST00000255641	human	ensembl	74_37	+1	known	missense	c.614	p.P205L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Casein_kinase-1_gamma_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK1G2	HGNC	ENSG00000133275				85	0	0	39	13	25
ZNF714	0	genome.wustl.edu	37	19	21300088	21300088	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	21300088	21300088	C	T	SNP	ZNF714	ENST00000596143	human	ensembl	74_37	+1	known	silent	c.618	p.G206	0.998	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF714	HGNC	ENSG00000160352				70	0	0	45	4	8.16327
AP3D1	0	genome.wustl.edu	37	19	2132534	2132534	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	2132534	2132534	G	A	SNP	AP3D1	ENST00000355272	human	ensembl	74_37	-1	known	missense	c.398	p.T133M	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	pfam_BLV_receptor,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	-	no_errors	AP3D1	HGNC	ENSG00000065000				174	0	0	122	28	18.6667
ZNF257	0	genome.wustl.edu	37	19	22255611	22255611	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	22255611	22255611	G	A	SNP	ZNF257	ENST00000594947	human	ensembl	74_37	+1	known	missense	c.4	p.G2R	0.968	superfamily_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF257	HGNC	ENSG00000197134				138	0	0	66	9	12
ZNF676	0	genome.wustl.edu	37	19	22363522	22363522	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	22363522	22363522	C	T	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.997	p.G333R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				124	0	0	80	14	14.8936
POP4	0	genome.wustl.edu	37	19	30106265	30106265	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	30106265	30106265	C	T	SNP	POP4	ENST00000585603	human	ensembl	74_37	+1	known	missense	c.641	p.A214V	0.668	superfamily_Rof/RNase_P-like,smart_RNase_P/MRP_p29,pirsf_RNase_P/MRP_p29-subunit	pfam_RNase_P/MRP_p29,superfamily_Rof/RNase_P-like,smart_RNase_P/MRP_p29,pirsf_RNase_P/MRP_p29-subunit	-	no_errors	POP4	HGNC	ENSG00000105171				95	0	0	61	9	12.8571
USF2	0	genome.wustl.edu	37	19	35770094	35770094	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	35770094	35770094	G	A	SNP	USF2	ENST00000222305	human	ensembl	74_37	+1	known	missense	c.976	p.A326T	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	USF2	HGNC	ENSG00000105698				17	0	0	16	2	11.1111
MAG	0	genome.wustl.edu	37	19	35786696	35786696	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	35786696	35786696	C	T	SNP	MAG	ENST00000392213	human	ensembl	74_37	+1	known	missense	c.227	p.S76L	1.000	smart_Ig_sub	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MAG	HGNC	ENSG00000105695				234	0	0	158	16	9.1954
ATP4A	0	genome.wustl.edu	37	19	36053496	36053496	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	36053496	36053496	C	A	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	silent	c.261	p.G87	0.998	pfam_ATPase_P-typ_cation-transptr_N,smart_ATPase_P-typ_cation-transptr_N,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675				20	0	0	16	4	20
RBM42	0	genome.wustl.edu	37	19	36124665	36124665	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	36124665	36124665	C	T	SNP	RBM42	ENST00000262633	human	ensembl	74_37	+1	known	missense	c.761	p.A254V	0.816	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM42	HGNC	ENSG00000126254				13	0	0	17	2	10.5263
HCST	0	genome.wustl.edu	37	19	36394742	36394742	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	36394742	36394742	G	A	SNP	HCST	ENST00000246551	human	ensembl	74_37	+1	known	missense	c.178	p.A60T	0.000	pfam_DAP10	pfam_DAP10	-	no_errors	HCST	HGNC	ENSG00000126264				49	0	0	43	5	10.4167
ZNF260	0	genome.wustl.edu	37	19	37006132	37006132	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	37006132	37006132	G	A	SNP	ZNF260	ENST00000523638	human	ensembl	74_37	-1	known	silent	c.9	p.G3	0.402	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF260	HGNC	ENSG00000254004				33	0	0	20	5	20
ZNF790	0	genome.wustl.edu	37	19	37310583	37310583	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	37310583	37310583	A	G	SNP	ZNF790	ENST00000356725	human	ensembl	74_37	-1	known	silent	c.663	p.T221	0.795	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF790	HGNC	ENSG00000197863				72	0	0	37	13	26
ZFR2	0	genome.wustl.edu	37	19	3819148	3819148	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	3819148	3819148	G	A	SNP	ZFR2	ENST00000262961	human	ensembl	74_37	-1	known	missense	c.1826	p.A609V	0.998	NULL	pfam_DZF,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR2	HGNC	ENSG00000105278				47	0	0	36	9	20
DPF1	0	genome.wustl.edu	37	19	38704286	38704286	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	38704286	38704286	C	T	SNP	DPF1	ENST00000355526	human	ensembl	74_37	-1	known	missense	c.1090	p.D364N	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_C2H2-like,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2	-	no_errors	DPF1	HGNC	ENSG00000011332				123	0	0	79	27	25.4717
RYR1	0	genome.wustl.edu	37	19	38987106	38987106	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	38987106	38987106	C	T	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	nonsense	c.6721	p.R2241*	1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				115	0	0	76	4	5
CAPN12	0	genome.wustl.edu	37	19	39221758	39221758	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	39221758	39221758	G	A	SNP	CAPN12	ENST00000328867	human	ensembl	74_37	-1	known	missense	c.2063	p.T688I	1.000	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN12	HGNC	ENSG00000182472				46	0	0	22	8	26.6667
CAPN12	0	genome.wustl.edu	37	19	39229238	39229238	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	39229238	39229238	C	T	SNP	CAPN12	ENST00000328867	human	ensembl	74_37	-1	known	silent	c.780	p.A260	0.027	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN12	HGNC	ENSG00000182472				85	0	0	51	15	22.7273
PSMC4	0	genome.wustl.edu	37	19	40485978	40485978	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	40485978	40485978	C	T	SNP	PSMC4	ENST00000157812	human	ensembl	74_37	+1	known	silent	c.843	p.A281	0.987	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC4	HGNC	ENSG00000013275				71	0	0	50	9	15.2542
AKT2	0	genome.wustl.edu	37	19	40743902	40743902	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	40743902	40743902	G	A	SNP	AKT2	ENST00000392038	human	ensembl	74_37	-1	known	missense	c.805	p.R269W	0.292	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom	-	no_errors	AKT2	HGNC	ENSG00000105221				38	0	0	32	4	11.1111
MAP2K2	0	genome.wustl.edu	37	19	4099243	4099243	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	4099243	4099243	T	C	SNP	MAP2K2	ENST00000262948	human	ensembl	74_37	-1	known	missense	c.875	p.H292R	0.997	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP2K2	HGNC	ENSG00000126934				22	0	0	9	3	25
C19orf54	0	genome.wustl.edu	37	19	41249853	41249853	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	41249853	41249853	C	T	SNP	C19orf54	ENST00000596809	human	ensembl	74_37	-1	known	missense	c.137	p.R46H	0.137	NULL	NULL	-	no_errors	C19orf54	HGNC	ENSG00000188493				145	0	0	92	21	18.5841
HNRNPUL1	0	genome.wustl.edu	37	19	41798223	41798223	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	41798223	41798223	T	A	SNP	HNRNPUL1	ENST00000392006	human	ensembl	74_37	+1	known	missense	c.1073	p.I358N	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_SAP_dom,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323				239	0	0	137	58	29.7436
CEACAM4	0	genome.wustl.edu	37	19	42132059	42132059	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	42132059	42132059	G	T	SNP	CEACAM4	ENST00000221954	human	ensembl	74_37	-1	known	missense	c.340	p.L114M	0.001	pfam_Ig_V-set,pfscan_Ig-like_dom	pfam_Ig_V-set,pfscan_Ig-like_dom	-	no_errors	CEACAM4	HGNC	ENSG00000105352				232	0	0	180	13	6.73575
GRIK5	0	genome.wustl.edu	37	19	42546801	42546801	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	42546801	42546801	C	T	SNP	GRIK5	ENST00000301218	human	ensembl	74_37	-1	known	missense	c.1376	p.R459H	1.000	pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK5	HGNC	ENSG00000105737				110	0	0	68	15	18.0723
ZNF526	0	genome.wustl.edu	37	19	42729088	42729088	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	42729088	42729088	C	A	SNP	ZNF526	ENST00000301215	human	ensembl	74_37	+1	known	missense	c.533	p.P178H	0.028	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF526	HGNC	ENSG00000167625				202	0	0	118	27	18.6207
GSK3A	0	genome.wustl.edu	37	19	42736801	42736801	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	42736801	42736801	C	T	SNP	GSK3A	ENST00000222330	human	ensembl	74_37	-1	known	missense	c.1132	p.A378T	0.991	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	GSK3A	HGNC	ENSG00000105723				68	0	0	55	3	5.17241
CXCL17	0	genome.wustl.edu	37	19	42933119	42933119	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	42933119	42933119	G	T	SNP	CXCL17	ENST00000601181	human	ensembl	74_37	-1	known	missense	c.277	p.H93N	0.989	NULL	NULL	-	no_errors	CXCL17	HGNC	ENSG00000189377				242	0	0	223	18	7.46888
PSG3	0	genome.wustl.edu	37	19	43244504	43244504	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	43244504	43244504	C	T	SNP	PSG3	ENST00000327495	human	ensembl	74_37	-1	known	silent	c.33	p.Q11	0.004	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG3	HGNC	ENSG00000221826				251	0	0	197	11	5.28846
ZNF575	0	genome.wustl.edu	37	19	44039443	44039443	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	44039443	44039443	C	T	SNP	ZNF575	ENST00000314228	human	ensembl	74_37	+1	known	silent	c.342	p.S114	0.562	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF575	HGNC	ENSG00000176472				46	0	0	51	4	7.27273
CHAF1A	0	genome.wustl.edu	37	19	4409665	4409665	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	4409665	4409665	C	T	SNP	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	missense	c.869	p.P290L	0.627	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670				121	0	0	74	33	30.8411
UBXN6	0	genome.wustl.edu	37	19	4446179	4446179	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	4446179	4446179	C	T	SNP	UBXN6	ENST00000301281	human	ensembl	74_37	-1	known	missense	c.1067	p.R356Q	1.000	pfam_UBX,smart_UBX,pfscan_UBX	pfam_PUB_domain,pfam_UBX,smart_PUG-dom,smart_UBX,pfscan_UBX	-	no_errors	UBXN6	HGNC	ENSG00000167671				37	0	0	21	7	25
ZNF227	0	genome.wustl.edu	37	19	44740799	44740799	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	44740799	44740799	C	T	SNP	ZNF227	ENST00000313040	human	ensembl	74_37	+1	known	missense	c.2216	p.T739I	0.981	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF227	HGNC	ENSG00000131115				124	0	0	83	26	23.8532
ZNF233	0	genome.wustl.edu	37	19	44778460	44778460	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	44778460	44778460	G	A	SNP	ZNF233	ENST00000391958	human	ensembl	74_37	+1	known	silent	c.1647	p.S549	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF233	HGNC	ENSG00000159915				106	0	0	51	18	26.087
CLASRP	0	genome.wustl.edu	37	19	45573816	45573816	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	45573816	45573816	G	A	SNP	CLASRP	ENST00000221455	human	ensembl	74_37	+1	known	missense	c.1979	p.R660Q	0.999	NULL	pfam_SWAP_N_domain	-	no_errors	CLASRP	HGNC	ENSG00000104859				380	0	0	208	65	23.8095
ERCC2	0	genome.wustl.edu	37	19	45856015	45856015	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	45856015	45856015	G	A	SNP	ERCC2	ENST00000391945	human	ensembl	74_37	-1	known	missense	c.1891	p.R631C	1.000	superfamily_P-loop_NTPase,smart_ATP-dep_Helicase_C,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DUF1227,pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,prints_XPGD_DNA_repair,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	ERCC2	HGNC	ENSG00000104884				121	0	0	84	10	10.6383
FBXO46	0	genome.wustl.edu	37	19	46215840	46215840	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	46215840	46215840	G	A	SNP	FBXO46	ENST00000317683	human	ensembl	74_37	-1	known	missense	c.914	p.T305I	1.000	NULL	superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO46	HGNC	ENSG00000177051				30	0	0	17	2	10.5263
SIX5	0	genome.wustl.edu	37	19	46269033	46269033	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	46269033	46269033	G	A	SNP	SIX5	ENST00000317578	human	ensembl	74_37	-1	known	missense	c.1946	p.A649V	0.001	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX5	HGNC	ENSG00000177045				90	0	0	46	15	24.5902
RSPH6A	0	genome.wustl.edu	37	19	46299296	46299296	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	46299296	46299296	G	T	SNP	RSPH6A	ENST00000221538	human	ensembl	74_37	-1	known	missense	c.1985	p.P662Q	1.000	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH6A	HGNC	ENSG00000104941				286	0	0	207	42	16.8675
DPP9	0	genome.wustl.edu	37	19	4690888	4690888	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	4690888	4690888	A	G	SNP	DPP9	ENST00000262960	human	ensembl	74_37	-1	known	splice_site	c.1596+2	e12+2	1.000	-	-	-	no_errors	DPP9	HGNC	ENSG00000142002				35	0	0	31	3	8.82353
PRKD2	0	genome.wustl.edu	37	19	47177801	47177801	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	47177801	47177801	C	T	SNP	PRKD2	ENST00000291281	human	ensembl	74_37	-1	known	silent	c.2616	p.A872	0.008	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD2	HGNC	ENSG00000105287				35	0	0	28	3	9.67742
SAE1	0	genome.wustl.edu	37	19	47700504	47700504	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	47700504	47700504	C	T	SNP	SAE1	ENST00000270225	human	ensembl	74_37	+1	known	missense	c.748	p.R250C	1.000	superfamily_Molybdenum_cofac_synth_MoeB	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like	-	no_errors	SAE1	HGNC	ENSG00000142230				138	0	0	96	17	15.0442
SAE1	0	genome.wustl.edu	37	19	47712468	47712468	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	47712468	47712468	T	C	SNP	SAE1	ENST00000270225	human	ensembl	74_37	+1	known	missense	c.1001	p.M334T	1.000	superfamily_Molybdenum_cofac_synth_MoeB	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like	-	no_errors	SAE1	HGNC	ENSG00000142230				122	0	0	102	10	8.92857
C5AR2	0	genome.wustl.edu	37	19	47844468	47844468	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	47844468	47844468	G	A	SNP	C5AR2	ENST00000257267	human	ensembl	74_37	+1	known	missense	c.412	p.G138R	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Anaphtx_C5AR1/C5AR2	-	no_errors	C5AR2	HGNC	ENSG00000134830				184	0	0	158	11	6.50888
DHX34	0	genome.wustl.edu	37	19	47858495	47858495	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	47858495	47858495	G	A	SNP	DHX34	ENST00000328771	human	ensembl	74_37	+1	known	missense	c.905	p.R302Q	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX34	HGNC	ENSG00000134815				171	0	0	128	32	20
GRIN2D	0	genome.wustl.edu	37	19	48918247	48918247	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	48918247	48918247	C	T	SNP	GRIN2D	ENST00000263269	human	ensembl	74_37	+1	known	silent	c.1539	p.H513	1.000	pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2D	HGNC	ENSG00000105464				111	0	0	61	25	29.0698
SEC1P	0	genome.wustl.edu	37	19	49183678	49183678	+	RNA	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	49183678	49183678	A	G	SNP	SEC1P	ENST00000430145	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	SEC1P	HGNC	ENSG00000232871				76	0	0	44	12	21.4286
UHRF1	0	genome.wustl.edu	37	19	4944449	4944449	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	4944449	4944449	G	A	SNP	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063				97	0	0	59	10	14.4928
KCNA7	0	genome.wustl.edu	37	19	49575417	49575417	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	49575417	49575417	C	T	SNP	KCNA7	ENST00000221444	human	ensembl	74_37	-1	known	silent	c.426	p.A142	1.000	prints_K_chnl,prints_K_chnl_volt-dep_Kv1	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1	-	no_errors	KCNA7	HGNC	ENSG00000104848				70	0	0	65	11	14.4737
RPL13A	0	genome.wustl.edu	37	19	49994304	49994304	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	49994304	49994304	G	A	SNP	RPL13A	ENST00000391857	human	ensembl	74_37	+1	known	missense	c.350	p.R117Q	1.000	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,tigrfam_Ribosomal_L13_euk/arc	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,tigrfam_Ribosomal_L13_euk/arc	-	no_errors	RPL13A	HGNC	ENSG00000142541				95	0	0	69	4	5.47945
CPT1C	0	genome.wustl.edu	37	19	50208537	50208537	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	50208537	50208537	A	G	SNP	CPT1C	ENST00000323446	human	ensembl	74_37	+1	known	missense	c.946	p.I316V	0.001	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1C	HGNC	ENSG00000169169				166	0	0	118	11	8.52713
CPT1C	0	genome.wustl.edu	37	19	50210827	50210827	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	50210827	50210827	C	A	SNP	CPT1C	ENST00000323446	human	ensembl	74_37	+1	known	missense	c.1396	p.L466I	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1C	HGNC	ENSG00000169169				79	0	0	56	5	8.19672
ZNF473	0	genome.wustl.edu	37	19	50549303	50549303	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	50549303	50549303	A	T	SNP	ZNF473	ENST00000270617	human	ensembl	74_37	+1	known	missense	c.1603	p.S535C	0.278	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF473	HGNC	ENSG00000142528				111	0	0	81	7	7.95455
MYH14	0	genome.wustl.edu	37	19	50720966	50720966	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	50720966	50720966	G	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	missense	c.500	p.R167H	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357				146	0	0	104	12	10.3448
SHANK1	0	genome.wustl.edu	37	19	51169816	51169816	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	51169816	51169816	G	A	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	missense	c.5425	p.R1809C	0.704	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681				13	0	0	10	4	28.5714
GPR32	0	genome.wustl.edu	37	19	51274069	51274069	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	51274069	51274069	G	A	SNP	GPR32	ENST00000270590	human	ensembl	74_37	+1	known	missense	c.212	p.R71H	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Formyl_pep_rcpt	-	no_errors	GPR32	HGNC	ENSG00000142511				84	0	0	58	13	18.3099
KDM4B	0	genome.wustl.edu	37	19	5144079	5144079	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	5144079	5144079	C	T	SNP	KDM4B	ENST00000159111	human	ensembl	74_37	+1	known	silent	c.2652	p.H884	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4B	HGNC	ENSG00000127663				124	0	0	98	9	8.41121
SIGLEC8	0	genome.wustl.edu	37	19	51961534	51961534	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	51961534	51961534	C	T	SNP	SIGLEC8	ENST00000321424	human	ensembl	74_37	-1	known	silent	c.108	p.T36	0.022	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC8	HGNC	ENSG00000105366				181	0	0	112	26	18.8406
SIGLEC12	0	genome.wustl.edu	37	19	52003521	52003521	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	52003521	52003521	T	G	SNP	SIGLEC12	ENST00000291707	human	ensembl	74_37	-1	known	missense	c.461	p.E154A	0.003	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC12	HGNC	ENSG00000254521				117	0	0	102	19	15.7025
ZNF525	0	genome.wustl.edu	37	19	53884897	53884897	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	53884897	53884897	C	T	SNP	ZNF525	ENST00000355326	human	ensembl	74_37	+1	known	silent	c.219	p.Y73	0.027	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF525	HGNC	ENSG00000203326				49	0	0	42	9	17.6471
ZNF761	0	genome.wustl.edu	37	19	53957990	53957990	+	RNA	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	53957990	53957990	C	T	SNP	ZNF761	ENST00000334095	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	ZNF761	HGNC	ENSG00000160336				124	0	0	63	16	20.2532
CACNG8	0	genome.wustl.edu	37	19	54481413	54481413	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	54481413	54481413	C	T	SNP	CACNG8	ENST00000270458	human	ensembl	74_37	+1	known	silent	c.297	p.G99	0.998	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu,prints_VDCC_g8su,prints_Claudin	-	no_errors	CACNG8	HGNC	ENSG00000142408				41	0	0	32	4	11.1111
ZNRF4	0	genome.wustl.edu	37	19	5456241	5456241	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	5456241	5456241	G	T	SNP	ZNRF4	ENST00000222033	human	ensembl	74_37	+1	known	missense	c.739	p.G247C	0.022	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF4	HGNC	ENSG00000105428				123	0	0	89	9	9.18367
CNOT3	0	genome.wustl.edu	37	19	54653309	54653309	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	54653309	54653309	C	T	SNP	CNOT3	ENST00000221232	human	ensembl	74_37	+1	known	missense	c.1421	p.A474V	0.112	pirsf_CCR4-NOT_su3/5	pfam_Not_N,pfam_NOT,pirsf_CCR4-NOT_su3/5	-	no_errors	CNOT3	HGNC	ENSG00000088038				30	0	0	16	10	38.4615
ZNF628	0	genome.wustl.edu	37	19	55995311	55995311	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	55995311	55995311	T	C	SNP	ZNF628	ENST00000598519	human	ensembl	74_37	+1	known	silent	c.2751	p.G917	0.018	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF628	HGNC	ENSG00000197483				15	0	0	10	5	33.3333
NLRP4	0	genome.wustl.edu	37	19	56370010	56370010	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	56370010	56370010	C	T	SNP	NLRP4	ENST00000301295	human	ensembl	74_37	+1	known	silent	c.1251	p.D417	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505				150	1	0.662252	113	21	15.6716
ZNF787	0	genome.wustl.edu	37	19	56614500	56614500	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	56614500	56614500	C	T	SNP	ZNF787	ENST00000587279	human	ensembl	74_37	-1	putative	silent	c.87	p.Q29	0.004	NULL	NULL	-	no_errors	ZNF787	HGNC	ENSG00000142409				71	0	0	37	11	22.9167
LONP1	0	genome.wustl.edu	37	19	5694524	5694524	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	5694524	5694524	C	A	SNP	LONP1	ENST00000360614	human	ensembl	74_37	-1	known	missense	c.2194	p.A732S	0.105	superfamily_P-loop_NTPase,tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Prk_AAA_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP1	HGNC	ENSG00000196365				79	0	0	67	4	5.6338
LONP1	0	genome.wustl.edu	37	19	5694903	5694903	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	5694903	5694903	C	A	SNP	LONP1	ENST00000360614	human	ensembl	74_37	-1	known	missense	c.2023	p.V675L	1.000	superfamily_P-loop_NTPase,tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Prk_AAA_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP1	HGNC	ENSG00000196365				54	0	0	41	14	25.4545
ZNF71	0	genome.wustl.edu	37	19	57133306	57133306	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	57133306	57133306	C	T	SNP	ZNF71	ENST00000328070	human	ensembl	74_37	+1	known	silent	c.651	p.D217	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF71	HGNC	ENSG00000197951				83	0	0	49	11	18.3333
ZNF324B	0	genome.wustl.edu	37	19	58967762	58967762	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	58967762	58967762	C	T	SNP	ZNF324B	ENST00000336614	human	ensembl	74_37	+1	known	missense	c.1451	p.T484M	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324B	HGNC	ENSG00000249471				136	0	0	85	26	23.4234
ZNF324	0	genome.wustl.edu	37	19	58982803	58982803	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	58982803	58982803	G	A	SNP	ZNF324	ENST00000196482	human	ensembl	74_37	+1	known	missense	c.944	p.C315Y	0.997	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324	HGNC	ENSG00000083812				29	0	0	20	5	20
ZNF324	0	genome.wustl.edu	37	19	58983109	58983109	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	58983109	58983109	G	A	SNP	ZNF324	ENST00000196482	human	ensembl	74_37	+1	known	missense	c.1250	p.R417H	0.993	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324	HGNC	ENSG00000083812				88	0	0	60	19	24.0506
MZF1	0	genome.wustl.edu	37	19	59073711	59073711	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	59073711	59073711	G	A	SNP	MZF1	ENST00000215057	human	ensembl	74_37	-1	known	missense	c.1933	p.R645C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	MZF1	HGNC	ENSG00000099326				21	0	0	14	2	12.5
POLRMT	0	genome.wustl.edu	37	19	629547	629547	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	629547	629547	G	A	SNP	POLRMT	ENST00000588649	human	ensembl	74_37	-1	known	missense	c.815	p.A272V	0.994	NULL	pfam_DNA-dir_Rpol_phage-type	-	no_errors	POLRMT	HGNC	ENSG00000099821				247	1	0.403226	187	34	15.3846
GTF2F1	0	genome.wustl.edu	37	19	6380339	6380339	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	6380339	6380339	C	T	SNP	GTF2F1	ENST00000394456	human	ensembl	74_37	-1	known	missense	c.1507	p.E503K	0.998	pfam_TFIIF-alpha	pfam_TFIIF-alpha,superfamily_TFIIF_interaction	-	no_errors	GTF2F1	HGNC	ENSG00000125651				284	1	0.350877	214	12	5.30973
FGF22	0	genome.wustl.edu	37	19	643437	643437	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	643437	643437	C	T	SNP	FGF22	ENST00000215530	human	ensembl	74_37	+1	known	missense	c.346	p.R116W	0.985	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF22	HGNC	ENSG00000070388				68	0	0	42	3	6.66667
CD320	0	genome.wustl.edu	37	19	8367418	8367418	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	8367418	8367418	G	A	SNP	CD320	ENST00000301458	human	ensembl	74_37	-1	known	missense	c.778	p.R260C	0.000	NULL	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	CD320	HGNC	ENSG00000167775				148	0	0	76	25	24.7525
ACTL9	0	genome.wustl.edu	37	19	8808575	8808575	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	8808575	8808575	G	A	SNP	ACTL9	ENST00000324436	human	ensembl	74_37	-1	known	silent	c.477	p.R159	0.963	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL9	HGNC	ENSG00000181786				124	0	0	75	20	21.0526
MUC16	0	genome.wustl.edu	37	19	8999422	8999422	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	8999422	8999422	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.40753	p.T13585A	0.997	smart_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				528	2	0.377358	355	44	11.0276
MUC16	0	genome.wustl.edu	37	19	9062137	9062137	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	9062137	9062137	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.25309	p.L8437F	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				117	0	0	97	6	5.82524
ARID3A	0	genome.wustl.edu	37	19	966745	966745	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	966745	966745	C	A	SNP	ARID3A	ENST00000263620	human	ensembl	74_37	+1	known	missense	c.1372	p.P458T	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3A	HGNC	ENSG00000116017				36	0	0	24	4	14.2857
ZNF562	0	genome.wustl.edu	37	19	9763880	9763880	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	9763880	9763880	T	C	SNP	ZNF562	ENST00000448622	human	ensembl	74_37	-1	known	silent	c.1026	p.K342	0.980	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF562	HGNC	ENSG00000171466				181	0	0	102	35	25.5474
POU3F3	0	genome.wustl.edu	37	2	105473365	105473365	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	105473365	105473365	C	T	SNP	POU3F3	ENST00000361360	human	ensembl	74_37	+1	known	missense	c.1397	p.P466L	1.000	superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Transcription_factor_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F3	HGNC	ENSG00000198914				69	0	0	46	9	16.3636
ST6GAL2	0	genome.wustl.edu	37	2	107459638	107459638	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	107459638	107459638	C	T	SNP	ST6GAL2	ENST00000361686	human	ensembl	74_37	-1	known	missense	c.796	p.G266S	1.000	pfam_Glyco_trans_29	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	-	no_errors	ST6GAL2	HGNC	ENSG00000144057				15	0	0	5	3	37.5
ATP6V1C2	0	genome.wustl.edu	37	2	10912017	10912017	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	10912017	10912017	G	A	SNP	ATP6V1C2	ENST00000272238	human	ensembl	74_37	+1	known	missense	c.523	p.V175M	1.000	pfam_ATPase_V1-cplx_csu	pfam_ATPase_V1-cplx_csu	-	no_errors	ATP6V1C2	HGNC	ENSG00000143882				204	0	0	129	37	22.2892
RANBP2	0	genome.wustl.edu	37	2	109352109	109352109	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	109352109	109352109	G	A	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.527	p.R176H	0.414	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				522	2	0.381679	344	99	22.3476
RANBP2	0	genome.wustl.edu	37	2	109371681	109371681	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	109371681	109371681	T	G	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.2432	p.L811R	1.000	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				232	2	0.854701	185	13	6.56566
E2F6	0	genome.wustl.edu	37	2	11590210	11590210	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	11590210	11590210	G	A	SNP	E2F6	ENST00000381525	human	ensembl	74_37	-1	known	silent	c.579	p.A193	0.572	NULL	pfam_E2F_TDP	-	no_errors	E2F6	HGNC	ENSG00000169016				161	0	0	115	25	17.8571
NTSR2	0	genome.wustl.edu	37	2	11798844	11798844	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	11798844	11798844	G	A	SNP	NTSR2	ENST00000306928	human	ensembl	74_37	-1	known	silent	c.994	p.L332	0.869	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_NT_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_NT2_rcpt,prints_NT_rcpt,prints_GPCR_Rhodpsn	-	no_errors	NTSR2	HGNC	ENSG00000169006				126	0	0	70	15	17.6471
GLI2	0	genome.wustl.edu	37	2	121728104	121728104	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	121728104	121728104	G	A	SNP	GLI2	ENST00000361492	human	ensembl	74_37	+1	known	silent	c.981	p.Q327	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047				126	0	0	59	20	25.3165
CNTNAP5	0	genome.wustl.edu	37	2	125261894	125261894	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	125261894	125261894	A	T	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.1085	p.E362V	1.000	superfamily_ConA-like_lec_gl_sf	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052				97	0	0	67	10	12.987
CNTNAP5	0	genome.wustl.edu	37	2	125504945	125504945	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	125504945	125504945	C	T	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	silent	c.2214	p.D738	0.937	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052				176	0	0	99	13	11.6071
ERCC3	0	genome.wustl.edu	37	2	128030517	128030517	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	128030517	128030517	G	A	SNP	ERCC3	ENST00000285398	human	ensembl	74_37	-1	known	missense	c.1751	p.T584M	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C,tigrfam_Helicase_Ercc3	pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_Helicase_Ercc3,tigrfam_Helicase_Ercc3	-	no_errors	ERCC3	HGNC	ENSG00000163161				93	0	0	63	5	7.35294
PLEKHB2	0	genome.wustl.edu	37	2	131890540	131890540	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	131890540	131890540	G	A	SNP	PLEKHB2	ENST00000303908	human	ensembl	74_37	+1	known	silent	c.399	p.T133	0.972	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHB2	HGNC	ENSG00000115762				126	0	0	75	31	29.2453
LOC150776	0	genome.wustl.edu	37	2	132257915	132257915	+	RNA	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	132257915	132257915	A	G	SNP	LOC150776	ENST00000438378	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC093838.4	Clone_based_vega_gene	ENSG00000152117				53	0	0	34	8	19.0476
LRP1B	0	genome.wustl.edu	37	2	141143560	141143560	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	141143560	141143560	G	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.10433	p.P3478H	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				138	0	0	114	29	20.2797
LRP1B	0	genome.wustl.edu	37	2	141598627	141598627	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	141598627	141598627	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	nonsense	c.4974	p.W1658*	1.000	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				93	0	0	67	7	9.45946
TNFAIP6	0	genome.wustl.edu	37	2	152220529	152220529	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	152220529	152220529	C	T	SNP	TNFAIP6	ENST00000243347	human	ensembl	74_37	+1	known	missense	c.167	p.A56V	0.999	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link,prints_Link	pfam_CUB_dom,pfam_Link,superfamily_CUB_dom,superfamily_C-type_lectin_fold,smart_Link,smart_CUB_dom,pfscan_CUB_dom,pfscan_Link,prints_Link	-	no_errors	TNFAIP6	HGNC	ENSG00000123610				81	0	0	63	7	10
NEB	0	genome.wustl.edu	37	2	152342437	152342437	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	152342437	152342437	C	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.25415	p.R8472H	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				101	0	0	41	14	25.4545
KCNJ3	0	genome.wustl.edu	37	2	155566239	155566239	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	155566239	155566239	C	T	SNP	KCNJ3	ENST00000295101	human	ensembl	74_37	+1	known	missense	c.827	p.A276V	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.1,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ3	HGNC	ENSG00000162989				113	0	0	75	17	18.4783
GPD2	0	genome.wustl.edu	37	2	157407179	157407179	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	157407179	157407179	C	T	SNP	GPD2	ENST00000310454	human	ensembl	74_37	+1	known	missense	c.892	p.R298C	1.000	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase,pfam_FAD_bind_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_G3P_DH_FAD-dep	-	no_errors	GPD2	HGNC	ENSG00000115159				85	0	0	54	19	26.0274
CYTIP	0	genome.wustl.edu	37	2	158272437	158272437	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	158272437	158272437	T	C	SNP	CYTIP	ENST00000264192	human	ensembl	74_37	-1	known	missense	c.832	p.T278A	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	CYTIP	HGNC	ENSG00000115165				98	0	0	67	19	22.093
PKP4	0	genome.wustl.edu	37	2	159523059	159523059	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	159523059	159523059	C	T	SNP	PKP4	ENST00000389759	human	ensembl	74_37	+1	known	silent	c.2712	p.R904	1.000	superfamily_ARM-type_fold,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283				142	0	0	104	7	6.30631
PKP4	0	genome.wustl.edu	37	2	159530257	159530257	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	159530257	159530257	G	A	SNP	PKP4	ENST00000389759	human	ensembl	74_37	+1	known	missense	c.2993	p.R998Q	1.000	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283				72	0	0	41	9	18
SCN1A	0	genome.wustl.edu	37	2	166894493	166894493	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	166894493	166894493	A	G	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	silent	c.2739	p.G913	0.904	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285				154	0	0	83	23	21.6981
LRP2	0	genome.wustl.edu	37	2	169989169	169989169	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	169989169	169989169	T	A	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.13643	p.D4548V	0.884	NULL	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				111	0	0	68	22	24.4444
LRP2	0	genome.wustl.edu	37	2	170101377	170101377	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	170101377	170101377	A	G	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.3256	p.C1086R	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				182	0	0	105	37	26.0563
RAPGEF4	0	genome.wustl.edu	37	2	173850209	173850209	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	173850209	173850209	G	A	SNP	RAPGEF4	ENST00000397081	human	ensembl	74_37	+1	known	missense	c.1138	p.G380R	1.000	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_DEP_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF4	HGNC	ENSG00000091428				215	0	0	147	29	16.4773
RAPGEF4	0	genome.wustl.edu	37	2	173885388	173885388	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	173885388	173885388	C	T	SNP	RAPGEF4	ENST00000397081	human	ensembl	74_37	+1	known	missense	c.2198	p.T733M	1.000	pfam_Ras-assoc,superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_DEP_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF4	HGNC	ENSG00000091428				196	0	0	169	33	16.3366
WIPF1	0	genome.wustl.edu	37	2	175436391	175436391	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	175436391	175436391	C	T	SNP	WIPF1	ENST00000409415	human	ensembl	74_37	-1	novel	missense	c.1142	p.R381H	0.000	NULL	smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WIPF1	HGNC	ENSG00000115935				184	0	0	127	9	6.61765
TTC30A	0	genome.wustl.edu	37	2	178483202	178483202	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	178483202	178483202	C	T	SNP	TTC30A	ENST00000355689	human	ensembl	74_37	-1	known	silent	c.228	p.P76	0.556	smart_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC30A	HGNC	ENSG00000197557				19	0	0	17	3	15
PRKRA	0	genome.wustl.edu	37	2	179309177	179309177	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	179309177	179309177	T	C	SNP	PRKRA	ENST00000325748	human	ensembl	74_37	-1	known	missense	c.368	p.N123S	1.000	NULL	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	PRKRA	HGNC	ENSG00000180228				102	0	0	95	10	9.52381
TTN	0	genome.wustl.edu	37	2	179395781	179395781	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	179395781	179395781	C	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.97857	p.E32619D	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				379	1	0.263158	267	78	22.6087
TTN	0	genome.wustl.edu	37	2	179401935	179401935	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	179401935	179401935	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.92197	p.E30733K	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				44	0	0	28	3	9.67742
TTN	0	genome.wustl.edu	37	2	179402474	179402474	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	179402474	179402474	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.91756	p.R30586C	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				65	0	0	32	3	8.57143
TTN	0	genome.wustl.edu	37	2	179424199	179424199	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	179424199	179424199	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.78956	p.A26319V	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				117	0	0	53	18	25.3521
TTN	0	genome.wustl.edu	37	2	179605033	179605033	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	179605033	179605033	A	G	SNP	TTN	ENST00000342175	human	ensembl	74_37	-1	known	silent	c.12414	p.N4138	0.000	superfamily_RNaseH-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				58	0	0	54	13	19.403
TTN	0	genome.wustl.edu	37	2	179621192	179621192	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	179621192	179621192	C	A	SNP	TTN	ENST00000342175	human	ensembl	74_37	-1	known	missense	c.10498	p.V3500L	0.885	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				78	0	0	46	9	16.3636
TTN	0	genome.wustl.edu	37	2	179640696	179640696	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	179640696	179640696	A	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.5895	p.D1965	0.476	superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				240	0	0	176	14	7.36842
FAM171B	0	genome.wustl.edu	37	2	187605100	187605100	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	187605100	187605100	C	A	SNP	FAM171B	ENST00000304698	human	ensembl	74_37	+1	known	silent	c.384	p.P128	1.000	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171B	HGNC	ENSG00000144369				76	0	0	56	8	12.5
NAB1	0	genome.wustl.edu	37	2	191524446	191524446	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	191524446	191524446	G	A	SNP	NAB1	ENST00000337386	human	ensembl	74_37	+1	known	missense	c.544	p.A182T	0.975	pfam_NAB_co-repressor_dom	pfam_Nab1_C,pfam_NAB_co-repressor_dom,pfam_Nab_N,superfamily_SAM/pointed	-	no_errors	NAB1	HGNC	ENSG00000138386				46	0	0	29	8	21.6216
SF3B1	0	genome.wustl.edu	37	2	198265472	198265472	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	198265472	198265472	A	G	SNP	SF3B1	ENST00000335508	human	ensembl	74_37	-1	known	silent	c.2685	p.G895	0.989	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524				101	0	0	76	4	5
KCTD18	0	genome.wustl.edu	37	2	201354988	201354988	+	Silent	SNP	T	T	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	201354988	201354988	T	A	SNP	KCTD18	ENST00000359878	human	ensembl	74_37	-1	known	silent	c.1116	p.T372	0.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold	-	no_errors	KCTD18	HGNC	ENSG00000155729				127	0	0	79	15	15.9574
STRADB	0	genome.wustl.edu	37	2	202323572	202323572	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	202323572	202323572	T	C	SNP	STRADB	ENST00000194530	human	ensembl	74_37	+1	known	silent	c.78	p.S26	0.973	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STRADB	HGNC	ENSG00000082146				80	0	0	58	14	19.4444
CARF	0	genome.wustl.edu	37	2	203807539	203807539	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	203807539	203807539	G	A	SNP	CARF	ENST00000320443	human	ensembl	74_37	+1	known	missense	c.155	p.R52H	0.016	NULL	NULL	-	no_errors	CARF	HGNC	ENSG00000138380				84	0	0	66	7	9.58904
NDUFS1	0	genome.wustl.edu	37	2	207009720	207009720	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	207009720	207009720	C	T	SNP	NDUFS1	ENST00000455934	human	ensembl	74_37	-1	known	silent	c.810	p.A270	0.974	tigrfam_NADH_UbQ_OxRdtase_Gsu	pfam_Mopterin_OxRdtase,pfam_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfam_NuoG_C,pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,smart_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfscan_2Fe-2S_ferredoxin-type,tigrfam_NADH_UbQ_OxRdtase_Gsu	-	no_errors	NDUFS1	HGNC	ENSG00000023228				78	0	0	53	12	18.4615
APOB	0	genome.wustl.edu	37	2	21232913	21232913	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	21232913	21232913	A	G	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.6827	p.I2276T	0.496	superfamily_ARM-type_fold	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				135	1	0.735294	99	26	20.8
SPAG16	0	genome.wustl.edu	37	2	214160816	214160816	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	214160816	214160816	T	C	SNP	SPAG16	ENST00000374309	human	ensembl	74_37	+1	known	missense	c.2	p.M1T	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SPAG16	HGNC	ENSG00000144451				117	0	0	68	23	25.2747
ABCA12	0	genome.wustl.edu	37	2	215876269	215876269	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	215876269	215876269	C	T	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	missense	c.2226	p.M742I	0.999	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452				168	0	0	98	23	19.0083
ATIC	0	genome.wustl.edu	37	2	216191614	216191614	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	216191614	216191614	G	A	SNP	ATIC	ENST00000236959	human	ensembl	74_37	+1	known	missense	c.601	p.V201I	0.011	pfam_AICARFT_IMPCHas,superfamily_Cytidine_deaminase-like,smart_AICARFT_IMPCHas,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas	pfam_AICARFT_IMPCHas,pfam_MGS-like_dom,superfamily_Cytidine_deaminase-like,superfamily_MGS-like_dom,smart_MGS-like_dom,smart_AICARFT_IMPCHas,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas	-	no_errors	ATIC	HGNC	ENSG00000138363				203	0	0	128	44	25.5814
TNS1	0	genome.wustl.edu	37	2	218700748	218700748	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	218700748	218700748	C	T	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	missense	c.2819	p.R940Q	1.000	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				119	0	0	64	13	16.8831
USP37	0	genome.wustl.edu	37	2	219410943	219410943	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	219410943	219410943	C	T	SNP	USP37	ENST00000258399	human	ensembl	74_37	-1	known	splice_site	c.680+1	e5+1	1.000	-	-	-	no_errors	USP37	HGNC	ENSG00000135913				53	0	0	31	4	11.4286
TUBA4A	0	genome.wustl.edu	37	2	220115630	220115630	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	220115630	220115630	C	T	SNP	TUBA4A	ENST00000248437	human	ensembl	74_37	-1	known	missense	c.791	p.R264H	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Beta_tubulin,prints_Delta_tubulin	-	no_errors	TUBA4A	HGNC	ENSG00000127824				132	1	0.75188	99	15	13.1579
SPEG	0	genome.wustl.edu	37	2	220354421	220354421	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	220354421	220354421	T	G	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	missense	c.8681	p.V2894G	0.000	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195				294	0	0	196	39	16.5957
TMEM198	0	genome.wustl.edu	37	2	220413898	220413898	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	220413898	220413898	G	A	SNP	TMEM198	ENST00000344458	human	ensembl	74_37	+1	known	missense	c.767	p.R256H	0.976	NULL	NULL	-	no_errors	TMEM198	HGNC	ENSG00000188760				199	0	0	128	44	25.5814
OBSL1	0	genome.wustl.edu	37	2	220421178	220421178	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	220421178	220421178	C	T	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.4334	p.R1445Q	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006				250	0	0	155	32	17.1123
EPHA4	0	genome.wustl.edu	37	2	222433479	222433479	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	222433479	222433479	G	A	SNP	EPHA4	ENST00000281821	human	ensembl	74_37	-1	known	nonsense	c.118	p.Q40*	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA4	HGNC	ENSG00000116106				35	0	0	30	7	18.9189
IRS1	0	genome.wustl.edu	37	2	227660213	227660213	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	227660213	227660213	C	T	SNP	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	missense	c.3242	p.R1081H	0.813	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047				184	0	0	129	14	9.79021
IRS1	0	genome.wustl.edu	37	2	227662740	227662740	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	227662740	227662740	G	A	SNP	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	nonsense	c.715	p.Q239*	1.000	pfam_Insln_rcpt_S1,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047				158	1	0.628931	89	23	20.5357
IRS1	0	genome.wustl.edu	37	2	227663331	227663331	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	227663331	227663331	C	T	SNP	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	missense	c.124	p.A42T	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047				207	0	0	133	29	17.9012
SPHKAP	0	genome.wustl.edu	37	2	228883949	228883949	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	228883949	228883949	G	A	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.1621	p.P541S	0.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820				170	0	0	102	30	22.7273
SLC16A14	0	genome.wustl.edu	37	2	230911163	230911163	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	230911163	230911163	G	A	SNP	SLC16A14	ENST00000295190	human	ensembl	74_37	-1	known	missense	c.679	p.R227C	0.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A14	HGNC	ENSG00000163053				154	0	0	118	9	7.08661
ARMC9	0	genome.wustl.edu	37	2	232079591	232079591	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	232079591	232079591	C	T	SNP	ARMC9	ENST00000349938	human	ensembl	74_37	+1	known	silent	c.225	p.F75	0.359	NULL	superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	ARMC9	HGNC	ENSG00000135931				93	0	0	61	9	12.8571
CHRNG	0	genome.wustl.edu	37	2	233410403	233410403	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	233410403	233410403	C	A	SNP	CHRNG	ENST00000389494	human	ensembl	74_37	+1	known	missense	c.1531	p.P511T	0.765	NULL	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNG	HGNC	ENSG00000196811				121	1	0.819672	96	14	12.7273
HJURP	0	genome.wustl.edu	37	2	234750011	234750011	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	234750011	234750011	G	A	SNP	HJURP	ENST00000411486	human	ensembl	74_37	-1	known	missense	c.1415	p.A472V	0.000	NULL	pfam_HJURP,pfam_HJURP_C,pfam_Centromere_Scm3_N	-	no_errors	HJURP	HGNC	ENSG00000123485				153	0	0	89	5	5.31915
AGAP1	0	genome.wustl.edu	37	2	236708038	236708038	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	236708038	236708038	G	A	SNP	AGAP1	ENST00000304032	human	ensembl	74_37	+1	known	missense	c.829	p.D277N	1.000	NULL	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP1	HGNC	ENSG00000157985				99	0	0	67	4	5.6338
COL6A3	0	genome.wustl.edu	37	2	238280583	238280583	+	Silent	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	238280583	238280583	G	C	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	silent	c.4077	p.L1359	0.991	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				75	0	0	47	14	22.9508
ASB1	0	genome.wustl.edu	37	2	239342241	239342241	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	239342241	239342241	G	A	SNP	ASB1	ENST00000264607	human	ensembl	74_37	+1	known	silent	c.96	p.P32	0.508	NULL	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB1	HGNC	ENSG00000065802				59	0	0	39	7	15.2174
OR6B2	0	genome.wustl.edu	37	2	240969565	240969565	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	240969565	240969565	G	A	SNP	OR6B2	ENST00000402971	human	ensembl	74_37	-1	known	silent	c.282	p.F94	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6B2	HGNC	ENSG00000182083				124	0	0	91	9	9
OR6B2	0	genome.wustl.edu	37	2	240969841	240969841	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	240969841	240969841	A	G	SNP	OR6B2	ENST00000402971	human	ensembl	74_37	-1	known	silent	c.6	p.S2	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6B2	HGNC	ENSG00000182083				53	0	0	30	10	25
KIF1A	0	genome.wustl.edu	37	2	241706349	241706349	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	241706349	241706349	G	T	SNP	KIF1A	ENST00000498729	human	ensembl	74_37	-1	known	missense	c.1667	p.S556Y	0.295	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1A	HGNC	ENSG00000130294				29	0	0	16	3	15.7895
C2orf54	0	genome.wustl.edu	37	2	241835121	241835121	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	241835121	241835121	C	A	SNP	C2orf54	ENST00000388934	human	ensembl	74_37	-1	known	missense	c.294	p.E98D	0.000	NULL	NULL	-	no_errors	C2orf54	HGNC	ENSG00000172478				93	0	0	75	5	6.25
ANO7	0	genome.wustl.edu	37	2	242154253	242154253	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	242154253	242154253	C	T	SNP	ANO7	ENST00000274979	human	ensembl	74_37	+1	known	nonsense	c.1924	p.Q642*	0.998	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO7	HGNC	ENSG00000146205				86	0	0	67	5	6.94444
HDLBP	0	genome.wustl.edu	37	2	242176046	242176046	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	242176046	242176046	G	A	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.2888	p.A963V	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677				144	0	0	75	24	24.2424
HDLBP	0	genome.wustl.edu	37	2	242179429	242179429	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	242179429	242179429	G	A	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.2278	p.R760C	0.207	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677				141	0	0	103	11	9.64912
ASXL2	0	genome.wustl.edu	37	2	25966041	25966041	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	25966041	25966041	G	A	SNP	ASXL2	ENST00000435504	human	ensembl	74_37	-1	known	silent	c.3165	p.H1055	0.993	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL2	HGNC	ENSG00000143970				52	0	0	32	3	8.57143
PREB	0	genome.wustl.edu	37	2	27357254	27357254	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	27357254	27357254	A	G	SNP	PREB	ENST00000260643	human	ensembl	74_37	-1	known	silent	c.36	p.A12	1.000	NULL	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	PREB	HGNC	ENSG00000138073				27	0	0	22	4	15.3846
SLC5A6	0	genome.wustl.edu	37	2	27430357	27430357	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	27430357	27430357	A	G	SNP	SLC5A6	ENST00000310574	human	ensembl	74_37	-1	known	silent	c.162	p.H54	0.998	pfscan_Na/solute_symporter	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A6	HGNC	ENSG00000138074				85	0	0	51	9	15
PLB1	0	genome.wustl.edu	37	2	28841220	28841220	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	28841220	28841220	G	A	SNP	PLB1	ENST00000422425	human	ensembl	74_37	+1	known	missense	c.3236	p.R1079Q	0.702	NULL	pfam_Lipase_GDSL	-	no_errors	PLB1	HGNC	ENSG00000163803				138	0	0	80	38	32.2034
ALK	0	genome.wustl.edu	37	2	29917828	29917828	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	29917828	29917828	C	T	SNP	ALK	ENST00000389048	human	ensembl	74_37	-1	known	silent	c.840	p.L280	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_MAM_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_MAM_dom,superfamily_Kinase-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_MAM_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ALK	HGNC	ENSG00000171094				167	0	0	106	20	15.873
SRD5A2	0	genome.wustl.edu	37	2	31805915	31805915	+	RNA	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	31805915	31805915	C	T	SNP	SRD5A2	ENST00000233139	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SRD5A2	HGNC	ENSG00000049319				45	0	0	33	11	25
BIRC6	0	genome.wustl.edu	37	2	32693612	32693612	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	32693612	32693612	C	T	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	missense	c.5888	p.A1963V	1.000	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760				112	0	0	66	17	20.4819
RMDN2	0	genome.wustl.edu	37	2	38178539	38178539	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	38178539	38178539	A	G	SNP	RMDN2	ENST00000234195	human	ensembl	74_37	+1	known	missense	c.181	p.S61G	0.001	NULL	NULL	-	no_errors	RMDN2	HGNC	ENSG00000115841				152	0	0	87	25	22.3214
SLC3A1	0	genome.wustl.edu	37	2	44531467	44531467	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	44531467	44531467	C	A	SNP	SLC3A1	ENST00000260649	human	ensembl	74_37	+1	known	missense	c.1322	p.P441H	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	-	no_errors	SLC3A1	HGNC	ENSG00000138079				68	0	0	53	6	10.1695
PIGF	0	genome.wustl.edu	37	2	46808671	46808671	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	46808671	46808671	A	G	SNP	PIGF	ENST00000281382	human	ensembl	74_37	-1	known	silent	c.606	p.I202	0.077	pfam_GPI_biosynthesis_protein_Pig-F	pfam_GPI_biosynthesis_protein_Pig-F	-	no_errors	PIGF	HGNC	ENSG00000151665				56	0	0	26	3	10.3448
TTC7A	0	genome.wustl.edu	37	2	47177502	47177502	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	47177502	47177502	A	T	SNP	TTC7A	ENST00000319190	human	ensembl	74_37	+1	known	missense	c.185	p.D62V	1.000	NULL	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC7A	HGNC	ENSG00000068724				291	0	0	235	22	8.56031
PPP1R21	0	genome.wustl.edu	37	2	48725735	48725735	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	48725735	48725735	G	A	SNP	PPP1R21	ENST00000294952	human	ensembl	74_37	+1	known	missense	c.1796	p.R599Q	0.983	pfam_KLRAQ/TTKRSYEDQ_C,superfamily_Ferritin-like_SF	pfam_KLRAQ/TTKRSYEDQ_C,pfam_Unchr_KLRAQ/TTKRSYEDQ_N,superfamily_Ferritin-like_SF	-	no_errors	PPP1R21	HGNC	ENSG00000162869				61	0	0	52	4	7.14286
LHCGR	0	genome.wustl.edu	37	2	48915561	48915561	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	48915561	48915561	C	T	SNP	LHCGR	ENST00000294954	human	ensembl	74_37	-1	known	missense	c.1375	p.V459I	0.991	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_LSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	LHCGR	HGNC	ENSG00000138039				81	0	0	54	5	8.47458
NRXN1	0	genome.wustl.edu	37	2	50573840	50573840	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	50573840	50573840	C	T	SNP	NRXN1	ENST00000342183	human	ensembl	74_37	-1	known	missense	c.248	p.R83Q	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Neurexin-like,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				73	0	0	48	13	21.3115
USP34	0	genome.wustl.edu	37	2	61439037	61439037	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	61439037	61439037	G	A	SNP	USP34	ENST00000398571	human	ensembl	74_37	-1	known	nonsense	c.8710	p.Q2904*	1.000	superfamily_ARM-type_fold	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464				51	0	0	46	4	8
CEP68	0	genome.wustl.edu	37	2	65298937	65298937	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	65298937	65298937	C	A	SNP	CEP68	ENST00000377990	human	ensembl	74_37	+1	known	missense	c.707	p.P236H	0.000	NULL	NULL	-	no_errors	CEP68	HGNC	ENSG00000011523				168	0	0	105	27	20.4545
ANTXR1	0	genome.wustl.edu	37	2	69420482	69420482	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	69420482	69420482	T	C	SNP	ANTXR1	ENST00000303714	human	ensembl	74_37	+1	known	silent	c.1369	p.L457	1.000	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_C	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_extracel,pfam_Anthrax_toxin_rcpt_C,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXR1	HGNC	ENSG00000169604				163	0	0	145	8	5.22876
TEX261	0	genome.wustl.edu	37	2	71218969	71218969	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	71218969	71218969	G	A	SNP	TEX261	ENST00000272438	human	ensembl	74_37	-1	known	silent	c.295	p.L99	1.000	pfam_Transmembrane_adaptor_Erv26	pfam_Transmembrane_adaptor_Erv26	-	no_errors	TEX261	HGNC	ENSG00000144043				39	0	0	20	9	31.0345
SLC4A5	0	genome.wustl.edu	37	2	74474271	74474271	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	74474271	74474271	C	T	SNP	SLC4A5	ENST00000357822	human	ensembl	74_37	-1	known	missense	c.1951	p.D651N	1.000	pfam_HCO3_transpt_C,prints_HCO3_transpt_euk,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A5	HGNC	ENSG00000188687				298	0	0	202	38	15.8333
M1AP	0	genome.wustl.edu	37	2	74867329	74867329	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	74867329	74867329	A	T	SNP	M1AP	ENST00000290536	human	ensembl	74_37	-1	known	missense	c.74	p.L25H	1.000	NULL	NULL	-	no_errors	M1AP	HGNC	ENSG00000159374				91	0	0	53	8	13.1148
POLR1A	0	genome.wustl.edu	37	2	86267634	86267634	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	86267634	86267634	C	T	SNP	POLR1A	ENST00000263857	human	ensembl	74_37	-1	known	silent	c.3621	p.P1207	0.002	pfam_RNA_pol_Rpb1_5	pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_Rpb1_1,smart_RNA_pol_N	-	no_errors	POLR1A	HGNC	ENSG00000068654				66	0	0	39	15	27.7778
THNSL2	0	genome.wustl.edu	37	2	88485550	88485550	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	88485550	88485550	C	T	SNP	THNSL2	ENST00000324166	human	ensembl	74_37	+1	known	missense	c.1363	p.R455W	0.984	superfamily_Trp_syn_b_sub_like_PLP_eny_SF	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,tigrfam_Thr_synthase_like	-	no_errors	THNSL2	HGNC	ENSG00000144115				13	0	0	9	3	25
TEKT4	0	genome.wustl.edu	37	2	95540642	95540642	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	95540642	95540642	G	A	SNP	TEKT4	ENST00000295201	human	ensembl	74_37	+1	known	missense	c.835	p.E279K	0.912	pfam_Tektin	pfam_Tektin,prints_Tektin	-	no_errors	TEKT4	HGNC	ENSG00000163060				34	0	0	19	3	13.6364
PROM2	0	genome.wustl.edu	37	2	95944487	95944487	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	95944487	95944487	G	A	SNP	PROM2	ENST00000317620	human	ensembl	74_37	+1	known	missense	c.1069	p.A357T	0.004	pfam_Prominin	pfam_Prominin	-	no_errors	PROM2	HGNC	ENSG00000155066				117	0	0	83	7	7.77778
SNRNP200	0	genome.wustl.edu	37	2	96948969	96948969	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	96948969	96948969	G	A	SNP	SNRNP200	ENST00000323853	human	ensembl	74_37	-1	known	nonsense	c.4885	p.R1629*	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SNRNP200	HGNC	ENSG00000144028				156	0	0	107	16	13.0081
KANSL3	0	genome.wustl.edu	37	2	97274280	97274280	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	97274280	97274280	C	T	SNP	KANSL3	ENST00000431828	human	ensembl	74_37	-1	known	missense	c.1706	p.R569Q	1.000	NULL	NULL	-	no_errors	KANSL3	HGNC	ENSG00000114982				99	0	0	88	8	8.33333
TAF1B	0	genome.wustl.edu	37	2	9985364	9985364	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	9985364	9985364	C	T	SNP	TAF1B	ENST00000263663	human	ensembl	74_37	+1	known	missense	c.34	p.R12C	0.560	pfam_TF_Rrn7	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750				102	0	0	67	20	22.9885
FLRT3	0	genome.wustl.edu	37	20	14307986	14307986	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	14307986	14307986	A	G	SNP	FLRT3	ENST00000341420	human	ensembl	74_37	-1	known	missense	c.167	p.I56T	1.000	smart_LRR-contain_N	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT3	HGNC	ENSG00000125848				162	0	0	102	24	19.0476
RRBP1	0	genome.wustl.edu	37	20	17602500	17602500	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	17602500	17602500	C	A	SNP	RRBP1	ENST00000246043	human	ensembl	74_37	-1	known	missense	c.3240	p.Q1080H	1.000	NULL	pfam_Rib_rcpt_KP,superfamily_Ribosome_recyc_fac_dom	-	no_errors	RRBP1	HGNC	ENSG00000125844				170	0	0	130	7	5.10949
OVOL2	0	genome.wustl.edu	37	20	18005430	18005430	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	18005430	18005430	C	A	SNP	OVOL2	ENST00000278780	human	ensembl	74_37	-1	known	missense	c.678	p.Q226H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	OVOL2	HGNC	ENSG00000125850				62	0	0	60	8	11.7647
RALGAPA2	0	genome.wustl.edu	37	20	20453516	20453516	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	20453516	20453516	C	T	SNP	RALGAPA2	ENST00000202677	human	ensembl	74_37	-1	known	missense	c.5452	p.A1818T	1.000	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPA2	HGNC	ENSG00000188559				68	0	0	46	5	9.80392
SSTR4	0	genome.wustl.edu	37	20	23016874	23016874	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	23016874	23016874	C	T	SNP	SSTR4	ENST00000255008	human	ensembl	74_37	+1	known	missense	c.754	p.R252C	0.708	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_4,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_NPY_rcpt,prints_Somatstn_rcpt_1	-	no_errors	SSTR4	HGNC	ENSG00000132671				112	0	0	66	13	16.4557
TGM3	0	genome.wustl.edu	37	20	2315907	2315907	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	2315907	2315907	C	A	SNP	TGM3	ENST00000381458	human	ensembl	74_37	+1	known	silent	c.1788	p.T596	0.936	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM3	HGNC	ENSG00000125780				107	1	0.925926	79	10	11.236
TGM6	0	genome.wustl.edu	37	20	2384451	2384451	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	2384451	2384451	C	A	SNP	TGM6	ENST00000202625	human	ensembl	74_37	+1	known	missense	c.1318	p.L440I	0.916	NULL	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM6	HGNC	ENSG00000166948				148	0	0	99	7	6.60377
PYGB	0	genome.wustl.edu	37	20	25261746	25261746	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	25261746	25261746	G	T	SNP	PYGB	ENST00000216962	human	ensembl	74_37	+1	known	silent	c.1401	p.S467	0.007	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGB	HGNC	ENSG00000100994				166	0	0	88	23	20.7207
PYGB	0	genome.wustl.edu	37	20	25277133	25277133	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	25277133	25277133	C	T	SNP	PYGB	ENST00000216962	human	ensembl	74_37	+1	known	missense	c.2507	p.P836L	1.000	pirsf_Glyco_trans_35	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGB	HGNC	ENSG00000100994				99	0	0	62	37	37.3737
NINL	0	genome.wustl.edu	37	20	25434182	25434182	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	25434182	25434182	G	A	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	nonsense	c.4054	p.R1352*	0.568	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004				119	1	0.833333	87	8	8.42105
TMC2	0	genome.wustl.edu	37	20	2577930	2577930	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	2577930	2577930	A	G	SNP	TMC2	ENST00000358864	human	ensembl	74_37	+1	known	missense	c.1210	p.T404A	1.000	NULL	pfam_TMC	-	no_errors	TMC2	HGNC	ENSG00000149488				49	0	0	41	12	22.6415
C20orf112	0	genome.wustl.edu	37	20	31040126	31040126	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	31040126	31040126	C	T	SNP	C20orf112	ENST00000359676	human	ensembl	74_37	-1	known	missense	c.1003	p.G335S	0.999	NULL	NULL	-	no_errors	C20orf112	HGNC	ENSG00000197183				162	0	0	113	18	13.7405
AHCY	0	genome.wustl.edu	37	20	32883312	32883312	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	32883312	32883312	C	T	SNP	AHCY	ENST00000217426	human	ensembl	74_37	-1	known	silent	c.108	p.R36	1.000	pfam_Adenosylhomocysteinase,pirsf_Adenosylhomocysteinase,tigrfam_Adenosylhomocysteinase	pfam_Adenosylhomocysteinase,pfam_Ado_hCys_hydrolase_NAD-bd,pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_IlvN,pirsf_Adenosylhomocysteinase,tigrfam_Adenosylhomocysteinase	-	no_errors	AHCY	HGNC	ENSG00000101444				55	0	0	30	4	11.7647
DYNLRB1	0	genome.wustl.edu	37	20	33122488	33122488	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	33122488	33122488	A	G	SNP	DYNLRB1	ENST00000417166	human	ensembl	74_37	+1	known	missense	c.136	p.M46V	1.000	pfam_Dynein_light-rel,smart_Dynein_light-rel	pfam_Dynein_light-rel,smart_Dynein_light-rel	-	no_errors	DYNLRB1	HGNC	ENSG00000125971				110	0	0	84	17	16.8317
NCOA6	0	genome.wustl.edu	37	20	33364108	33364108	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	33364108	33364108	C	T	SNP	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	missense	c.379	p.V127I	1.000	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646				119	1	0.833333	63	18	22.2222
TTI1	0	genome.wustl.edu	37	20	36640099	36640099	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	36640099	36640099	C	T	SNP	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	missense	c.2120	p.R707H	0.981	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407				95	0	0	54	7	11.4754
ZNF335	0	genome.wustl.edu	37	20	44594330	44594330	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	44594330	44594330	G	A	SNP	ZNF335	ENST00000322927	human	ensembl	74_37	-1	known	missense	c.1039	p.P347S	0.880	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF335	HGNC	ENSG00000198026				93	0	0	66	18	21.4286
MMP9	0	genome.wustl.edu	37	20	44639874	44639874	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	44639874	44639874	G	A	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	missense	c.742	p.G248S	1.000	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985				260	0	0	183	33	15.2778
MMP9	0	genome.wustl.edu	37	20	44642136	44642136	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	44642136	44642136	G	A	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	missense	c.1573	p.A525T	0.419	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985				34	0	0	27	6	18.1818
EYA2	0	genome.wustl.edu	37	20	45725724	45725724	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	45725724	45725724	C	T	SNP	EYA2	ENST00000327619	human	ensembl	74_37	+1	known	missense	c.805	p.R269C	1.000	pfam_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA2	HGNC	ENSG00000064655				202	0	0	139	10	6.71141
ZMYND8	0	genome.wustl.edu	37	20	45853116	45853116	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	45853116	45853116	T	C	SNP	ZMYND8	ENST00000536340	human	ensembl	74_37	-1	known	missense	c.3131	p.Q1044R	1.000	NULL	pfam_DUF3544,pfam_Bromodomain,pfam_PWWP_dom,pfam_Znf_PHD-finger,pfam_Znf_MYND,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND8	HGNC	ENSG00000101040				258	0	0	172	36	17.3077
SLC9A8	0	genome.wustl.edu	37	20	48504378	48504378	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	48504378	48504378	G	A	SNP	SLC9A8	ENST00000417961	human	ensembl	74_37	+1	known	missense	c.1699	p.G567R	1.000	NULL	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A8	HGNC	ENSG00000197818				125	0	0	76	31	28.972
NFATC2	0	genome.wustl.edu	37	20	50051813	50051813	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	50051813	50051813	C	A	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.1944	p.K648N	1.000	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096				228	0	0	170	9	5.02793
NFATC2	0	genome.wustl.edu	37	20	50090640	50090640	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	50090640	50090640	G	A	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.1585	p.R529W	1.000	pfam_RHD,superfamily_p53-like_TF_DNA-bd,pfscan_RHD	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096				110	0	0	89	17	16.0377
ATP9A	0	genome.wustl.edu	37	20	50287727	50287727	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	50287727	50287727	G	A	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	silent	c.1107	p.P369	0.538	tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793				84	0	0	61	12	16.4384
BCAS1	0	genome.wustl.edu	37	20	52612451	52612451	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	52612451	52612451	T	C	SNP	BCAS1	ENST00000371440	human	ensembl	74_37	-1	known	missense	c.862	p.M288V	1.000	NULL	NULL	-	no_errors	BCAS1	HGNC	ENSG00000064787				88	0	0	68	20	22.7273
RTFDC1	0	genome.wustl.edu	37	20	55048423	55048423	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	55048423	55048423	C	T	SNP	RTFDC1	ENST00000357348	human	ensembl	74_37	+1	known	nonsense	c.226	p.R76*	0.977	pfam_Rtf2_RING-finger	pfam_Rtf2_RING-finger	-	no_errors	RTFDC1	HGNC	ENSG00000022277				93	0	0	69	10	12.6582
GNAS	0	genome.wustl.edu	37	20	57415433	57415433	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	57415433	57415433	C	T	SNP	GNAS	ENST00000313949	human	ensembl	74_37	+1	known	missense	c.272	p.A91V	0.004	pfam_NESP55	pfam_NESP55	-	no_errors	GNAS	HGNC	ENSG00000087460				156	0	0	95	28	22.7642
GNAS	0	genome.wustl.edu	37	20	57429608	57429608	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	57429608	57429608	G	A	SNP	GNAS	ENST00000371100	human	ensembl	74_37	+1	putative	missense	c.1288	p.D430N	0.042	NULL	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460				16	0	0	16	3	15.7895
NELFCD	0	genome.wustl.edu	37	20	57566041	57566041	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	57566041	57566041	G	A	SNP	NELFCD	ENST00000602795	human	ensembl	74_37	+1	known	missense	c.919	p.A307T	1.000	pfam_TH1	pfam_TH1	-	no_errors	NELFCD	HGNC	ENSG00000101158				163	0	0	128	17	11.7241
SYCP2	0	genome.wustl.edu	37	20	58457217	58457217	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	58457217	58457217	T	C	SNP	SYCP2	ENST00000357552	human	ensembl	74_37	-1	known	missense	c.2533	p.K845E	0.998	NULL	NULL	-	no_errors	SYCP2	HGNC	ENSG00000196074				45	0	0	30	6	16.6667
CDH4	0	genome.wustl.edu	37	20	60485530	60485530	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	60485530	60485530	C	T	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	missense	c.1241	p.T414M	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242				97	0	0	60	7	10.4478
TAF4	0	genome.wustl.edu	37	20	60581702	60581702	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	60581702	60581702	A	G	SNP	TAF4	ENST00000252996	human	ensembl	74_37	-1	known	missense	c.2087	p.V696A	1.000	NULL	pfam_TAF4,pfam_TAFH_NHR1,superfamily_Histone-fold,smart_TAFH_NHR1,pfscan_TAFH_NHR1	-	no_errors	TAF4	HGNC	ENSG00000130699				43	0	0	30	7	18.9189
LSM14B	0	genome.wustl.edu	37	20	60704864	60704864	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	60704864	60704864	G	A	SNP	LSM14B	ENST00000279068	human	ensembl	74_37	+1	known	missense	c.451	p.V151I	0.033	NULL	pfam_FDF_dom,superfamily_LSM_dom	-	no_errors	LSM14B	HGNC	ENSG00000149657				22	0	0	15	8	34.7826
ABHD16B	0	genome.wustl.edu	37	20	62493610	62493610	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	62493610	62493610	G	A	SNP	ABHD16B	ENST00000369916	human	ensembl	74_37	+1	known	silent	c.717	p.A239	0.001	pfam_AB_hydrolase_1	pfam_AB_hydrolase_1	-	no_errors	ABHD16B	HGNC	ENSG00000183260				35	0	0	34	3	8.10811
RGS19	0	genome.wustl.edu	37	20	62707974	62707974	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	62707974	62707974	C	T	SNP	RGS19	ENST00000332298	human	ensembl	74_37	-1	known	missense	c.56	p.R19Q	0.891	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS19	HGNC	ENSG00000171700				228	0	0	164	10	5.74713
OPRL1	0	genome.wustl.edu	37	20	62724254	62724254	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	62724254	62724254	G	A	SNP	OPRL1	ENST00000336866	human	ensembl	74_37	+1	known	missense	c.181	p.V61M	0.999	pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_X_opioid_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Somatstn_rcpt,prints_Neuropept_B/W_rcpt,prints_NPY_rcpt	-	no_errors	OPRL1	HGNC	ENSG00000125510				99	0	0	55	8	12.6984
TMX4	0	genome.wustl.edu	37	20	7980488	7980488	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	7980488	7980488	G	A	SNP	TMX4	ENST00000246024	human	ensembl	74_37	-1	known	missense	c.358	p.R120C	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TMX4	HGNC	ENSG00000125827				71	0	0	44	4	8.33333
APP	0	genome.wustl.edu	37	21	27423391	27423391	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	27423391	27423391	A	G	SNP	APP	ENST00000346798	human	ensembl	74_37	-1	known	missense	c.587	p.V196A	0.009	NULL	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Amyloid_glyco_Abeta,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Amyloid_glyco_Abeta,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APP	HGNC	ENSG00000142192				95	0	0	64	16	20
DONSON	0	genome.wustl.edu	37	21	34958406	34958406	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	34958406	34958406	G	A	SNP	DONSON	ENST00000303071	human	ensembl	74_37	-1	known	nonsense	c.484	p.R162*	0.988	NULL	NULL	-	no_errors	DONSON	HGNC	ENSG00000159147				83	0	0	65	10	13.3333
ITSN1	0	genome.wustl.edu	37	21	35195929	35195929	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	35195929	35195929	C	T	SNP	ITSN1	ENST00000381285	human	ensembl	74_37	+1	known	missense	c.3155	p.S1052F	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_dom,superfamily_DH-domain,superfamily_C2_dom,superfamily_SH3_domain,superfamily_P-loop_NTPase,smart_EPS15_homology,smart_EF_hand_dom,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_p67phox	-	no_errors	ITSN1	HGNC	ENSG00000205726				110	0	0	64	25	28.0899
SETD4	0	genome.wustl.edu	37	21	37417922	37417922	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	37417922	37417922	G	A	SNP	SETD4	ENST00000332131	human	ensembl	74_37	-1	known	silent	c.684	p.L228	0.002	pfam_SET_dom,pirsf_Lys_MTase_YDR198C_prd	pfam_Rubisco_LSMT_subst-bd,pfam_SET_dom,pirsf_Lys_MTase_YDR198C_prd	-	no_errors	SETD4	HGNC	ENSG00000185917				108	0	0	66	13	16.4557
KCNJ6	0	genome.wustl.edu	37	21	39087018	39087018	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	39087018	39087018	C	G	SNP	KCNJ6	ENST00000288309	human	ensembl	74_37	-1	known	missense	c.442	p.E148Q	1.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.2	-	no_errors	KCNJ6	HGNC	ENSG00000157542				134	0	0	75	24	24.2424
KCNJ15	0	genome.wustl.edu	37	21	39671474	39671474	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	39671474	39671474	C	T	SNP	KCNJ15	ENST00000328656	human	ensembl	74_37	+1	known	silent	c.291	p.P97	0.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.3,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.1	-	no_errors	KCNJ15	HGNC	ENSG00000157551				184	0	0	94	19	16.8142
BRWD1	0	genome.wustl.edu	37	21	40627652	40627652	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	40627652	40627652	C	T	SNP	BRWD1	ENST00000333229	human	ensembl	74_37	-1	known	missense	c.2174	p.R725H	0.982	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD1	HGNC	ENSG00000185658				111	0	0	90	6	6.25
MCM3AP	0	genome.wustl.edu	37	21	47663516	47663516	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	47663516	47663516	C	A	SNP	MCM3AP	ENST00000291688	human	ensembl	74_37	-1	known	missense	c.5159	p.R1720M	0.512	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	MCM3AP	HGNC	ENSG00000160294				107	0	0	53	4	7.01754
IL17RA	0	genome.wustl.edu	37	22	17578808	17578808	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	17578808	17578808	C	T	SNP	IL17RA	ENST00000319363	human	ensembl	74_37	+1	known	silent	c.285	p.H95	0.000	NULL	pfam_SEFIR	-	no_errors	IL17RA	HGNC	ENSG00000177663				76	0	0	41	8	16.3265
SEPT5	0	genome.wustl.edu	37	22	19707904	19707904	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	19707904	19707904	G	A	SNP	SEPT5	ENST00000383045	human	ensembl	74_37	+1	known	missense	c.451	p.G151S	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT5	HGNC	ENSG00000184702				92	0	0	55	4	6.77966
KLHL22	0	genome.wustl.edu	37	22	20796677	20796677	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	20796677	20796677	G	A	SNP	KLHL22	ENST00000328879	human	ensembl	74_37	-1	known	missense	c.1588	p.L530F	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL22	HGNC	ENSG00000099910				71	0	0	71	5	6.57895
TOP3B	0	genome.wustl.edu	37	22	22319678	22319678	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	22319678	22319678	G	A	SNP	TOP3B	ENST00000357179	human	ensembl	74_37	-1	known	missense	c.922	p.R308C	0.979	pfam_Topo_IA_cen,superfamily_Topo_IA_core_domain,smart_Topo_IA_DNA-bd	pfam_Topo_IA_cen,pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3B	HGNC	ENSG00000100038				39	0	0	22	2	8.33333
PRAME	0	genome.wustl.edu	37	22	22893468	22893468	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	22893468	22893468	C	T	SNP	PRAME	ENST00000398741	human	ensembl	74_37	-1	known	missense	c.65	p.S22N	0.064	NULL	NULL	-	no_errors	PRAME	HGNC	ENSG00000185686				224	0	0	153	36	19.0476
GNAZ	0	genome.wustl.edu	37	22	23438116	23438116	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	23438116	23438116	C	T	SNP	GNAZ	ENST00000248996	human	ensembl	74_37	+1	known	silent	c.234	p.I78	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAZ	HGNC	ENSG00000128266				357	0	0	269	91	25.2778
BCR	0	genome.wustl.edu	37	22	23596021	23596021	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	23596021	23596021	G	A	SNP	BCR	ENST00000305877	human	ensembl	74_37	+1	known	missense	c.1315	p.A439T	0.684	NULL	pfam_RhoGAP_dom,pfam_Bcr-Abl_oncoprot_oligo,pfam_DH-domain,pfam_C2_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_Bcr-Abl_oncoprot_oligo,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	BCR	HGNC	ENSG00000186716				103	0	0	80	5	5.88235
SPECC1L	0	genome.wustl.edu	37	22	24810529	24810529	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	24810529	24810529	C	T	SNP	SPECC1L	ENST00000314328	human	ensembl	74_37	+1	known	nonsense	c.3292	p.R1098*	0.995	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_bHLH_dom,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1L	HGNC	ENSG00000100014				57	0	0	40	6	13.0435
TFIP11	0	genome.wustl.edu	37	22	26895170	26895170	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	26895170	26895170	T	G	SNP	TFIP11	ENST00000405938	human	ensembl	74_37	-1	known	missense	c.1229	p.K410T	1.000	pfam_GCFC_dom	pfam_GCFC_dom,pfam_TIP_N,pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	TFIP11	HGNC	ENSG00000100109				111	0	0	74	20	21.2766
ASCC2	0	genome.wustl.edu	37	22	30188437	30188437	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	30188437	30188437	G	A	SNP	ASCC2	ENST00000307790	human	ensembl	74_37	-1	known	silent	c.2007	p.D669	0.214	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	ASCC2	HGNC	ENSG00000100325				624	0	0	424	96	18.4615
MORC2	0	genome.wustl.edu	37	22	31333609	31333609	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	31333609	31333609	G	A	SNP	MORC2	ENST00000397641	human	ensembl	74_37	-1	known	missense	c.1459	p.R487C	1.000	NULL	pfam_Znf_CW,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Carb-bd_dom,pfscan_Znf_CW	-	no_errors	MORC2	HGNC	ENSG00000133422				100	0	0	58	14	19.4444
LIMK2	0	genome.wustl.edu	37	22	31658139	31658139	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	31658139	31658139	A	G	SNP	LIMK2	ENST00000331728	human	ensembl	74_37	+1	known	missense	c.571	p.S191G	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Znf_LIM,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK2	HGNC	ENSG00000182541				217	0	0	151	19	11.1765
APOL6	0	genome.wustl.edu	37	22	36054849	36054849	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	36054849	36054849	G	A	SNP	APOL6	ENST00000409652	human	ensembl	74_37	+1	known	missense	c.238	p.V80M	0.010	pfam_ApoL	pfam_ApoL	-	no_errors	APOL6	HGNC	ENSG00000221963				72	0	0	39	6	13.3333
APOL5	0	genome.wustl.edu	37	22	36122584	36122584	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	36122584	36122584	G	A	SNP	APOL5	ENST00000249044	human	ensembl	74_37	+1	known	missense	c.469	p.A157T	0.151	pfam_ApoL	pfam_ApoL	-	no_errors	APOL5	HGNC	ENSG00000128313				170	0	0	95	29	23.3871
FOXRED2	0	genome.wustl.edu	37	22	36897391	36897391	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	36897391	36897391	G	A	SNP	FOXRED2	ENST00000216187	human	ensembl	74_37	-1	known	silent	c.1113	p.Y371	1.000	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FOXRED2	HGNC	ENSG00000100350				84	0	0	64	10	13.5135
FOXRED2	0	genome.wustl.edu	37	22	36902129	36902129	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	36902129	36902129	T	C	SNP	FOXRED2	ENST00000216187	human	ensembl	74_37	-1	known	missense	c.341	p.Y114C	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FOXRED2	HGNC	ENSG00000100350				95	0	0	83	7	7.77778
CYTH4	0	genome.wustl.edu	37	22	37699442	37699442	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	37699442	37699442	G	A	SNP	CYTH4	ENST00000248901	human	ensembl	74_37	+1	known	missense	c.695	p.R232Q	0.908	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	CYTH4	HGNC	ENSG00000100055				50	0	0	25	9	26.4706
TRIOBP	0	genome.wustl.edu	37	22	38120705	38120705	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	38120705	38120705	C	A	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	silent	c.2142	p.T714	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106				153	0	0	100	19	15.9664
TRIOBP	0	genome.wustl.edu	37	22	38121668	38121668	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	38121668	38121668	C	T	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	silent	c.3105	p.H1035	0.550	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106				210	0	0	164	28	14.5833
SLC16A8	0	genome.wustl.edu	37	22	38476857	38476857	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	38476857	38476857	C	T	SNP	SLC16A8	ENST00000320521	human	ensembl	74_37	-1	known	silent	c.1188	p.P396	0.982	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A8	HGNC	ENSG00000100156				10	0	0	4	3	42.8571
KCNJ4	0	genome.wustl.edu	37	22	38824062	38824062	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	38824062	38824062	C	T	SNP	KCNJ4	ENST00000303592	human	ensembl	74_37	-1	known	missense	c.76	p.G26S	1.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.3	-	no_errors	KCNJ4	HGNC	ENSG00000168135				491	1	0.203252	308	85	21.6285
TAB1	0	genome.wustl.edu	37	22	39813774	39813774	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	39813774	39813774	C	T	SNP	TAB1	ENST00000216160	human	ensembl	74_37	+1	known	missense	c.470	p.T157M	0.000	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	TAB1	HGNC	ENSG00000100324				94	0	0	60	16	21.0526
TNRC6B	0	genome.wustl.edu	37	22	40711509	40711509	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	40711509	40711509	C	T	SNP	TNRC6B	ENST00000454349	human	ensembl	74_37	+1	known	missense	c.4901	p.S1634L	0.995	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354				58	0	0	36	13	26.5306
EP300	0	genome.wustl.edu	37	22	41527551	41527551	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	41527551	41527551	C	T	SNP	EP300	ENST00000263253	human	ensembl	74_37	+1	known	missense	c.1442	p.P481L	0.978	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC	ENSG00000100393				109	0	0	78	7	8.23529
POLDIP3	0	genome.wustl.edu	37	22	42981828	42981828	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	42981828	42981828	G	A	SNP	POLDIP3	ENST00000252115	human	ensembl	74_37	-1	known	missense	c.1235	p.T412M	0.995	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	POLDIP3	HGNC	ENSG00000100227				230	0	0	158	39	19.797
ARHGAP8	0	genome.wustl.edu	37	22	45128176	45128176	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	45128176	45128176	A	G	SNP	ARHGAP8	ENST00000517296	human	ensembl	74_37	+1	known	missense	c.460	p.N154D	1.000	pfam_HbrB	pfam_RhoGAP_dom,pfam_HbrB,pfam_CRAL-TRIO_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CRAL-TRIO_dom,smart_RhoGAP_dom,pfscan_CRAL-TRIO_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP8	HGNC	ENSG00000241484				87	0	0	69	5	6.75676
ATXN10	0	genome.wustl.edu	37	22	46096163	46096163	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	46096163	46096163	T	C	SNP	ATXN10	ENST00000252934	human	ensembl	74_37	+1	known	silent	c.393	p.A131	0.984	superfamily_ARM-type_fold	pfam_Ataxin-10_domain,superfamily_ARM-type_fold	-	no_errors	ATXN10	HGNC	ENSG00000130638				38	0	0	35	7	16.6667
BRD1	0	genome.wustl.edu	37	22	50217190	50217190	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	50217190	50217190	C	T	SNP	BRD1	ENST00000216267	human	ensembl	74_37	-1	known	missense	c.776	p.R259H	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,prints_Bromodomain,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	BRD1	HGNC	ENSG00000100425				59	0	0	26	9	25.7143
SBF1	0	genome.wustl.edu	37	22	50900529	50900529	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	50900529	50900529	C	T	SNP	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	missense	c.2416	p.E806K	0.999	NULL	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241				166	0	0	111	43	27.9221
SHANK3	0	genome.wustl.edu	37	22	51160646	51160646	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	51160646	51160646	G	A	SNP	SHANK3	ENST00000262795	human	ensembl	74_37	+1	known	missense	c.4433	p.R1478H	1.000	NULL	pfam_SAM_type1,pfam_Ankyrin_rpt,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK3	HGNC	ENSG00000251322				35	0	0	20	5	20
RABL2B	0	genome.wustl.edu	37	22	51208372	51208372	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	51208372	51208372	G	A	SNP	RABL2B	ENST00000354869	human	ensembl	74_37	-1	known	missense	c.370	p.P124S	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RABL2B	HGNC	ENSG00000079974				81	0	0	50	17	25.3731
NXPE3	0	genome.wustl.edu	37	3	101504476	101504476	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	101504476	101504476	C	T	SNP	NXPE3	ENST00000273347	human	ensembl	74_37	+1	known	silent	c.36	p.C12	1.000	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE3	HGNC	ENSG00000144815				175	0	0	145	11	7.05128
KIAA1524	0	genome.wustl.edu	37	3	108295157	108295157	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	108295157	108295157	T	C	SNP	KIAA1524	ENST00000295746	human	ensembl	74_37	-1	known	silent	c.855	p.L285	0.998	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA1524	HGNC	ENSG00000163507				134	0	0	85	18	17.4757
CCDC80	0	genome.wustl.edu	37	3	112357212	112357212	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	112357212	112357212	C	T	SNP	CCDC80	ENST00000206423	human	ensembl	74_37	-1	known	missense	c.1541	p.R514Q	0.445	NULL	NULL	-	no_errors	CCDC80	HGNC	ENSG00000091986				145	0	0	84	25	22.9358
KIAA2018	0	genome.wustl.edu	37	3	113376015	113376015	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	113376015	113376015	T	C	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	missense	c.4514	p.Q1505R	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542				115	0	0	98	9	8.41121
KIAA2018	0	genome.wustl.edu	37	3	113376613	113376613	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	113376613	113376613	T	C	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	missense	c.3916	p.T1306A	0.076	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542				171	0	0	121	30	19.8675
SEMA5B	0	genome.wustl.edu	37	3	122647874	122647874	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	122647874	122647874	C	T	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.668	p.R223H	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684				59	0	0	42	15	26.3158
KALRN	0	genome.wustl.edu	37	3	124237266	124237266	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	124237266	124237266	G	A	SNP	KALRN	ENST00000240874	human	ensembl	74_37	+1	known	missense	c.4949	p.R1650Q	1.000	NULL	pfam_Spectrin_repeat,pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145				141	0	0	109	17	13.4921
KALRN	0	genome.wustl.edu	37	3	124377290	124377290	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	124377290	124377290	C	T	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.6046	p.H2016Y	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145				98	0	0	68	9	11.6883
MUC13	0	genome.wustl.edu	37	3	124627007	124627007	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	124627007	124627007	C	T	SNP	MUC13	ENST00000311075	human	ensembl	74_37	-1	known	missense	c.1523	p.R508H	0.000	NULL	pfam_SEA_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	MUC13	HGNC	ENSG00000173702				71	0	0	50	7	12.2807
KLF15	0	genome.wustl.edu	37	3	126071347	126071347	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	126071347	126071347	G	A	SNP	KLF15	ENST00000296233	human	ensembl	74_37	-1	known	missense	c.419	p.T140I	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF15	HGNC	ENSG00000163884				64	0	0	28	11	28.2051
COL6A5	0	genome.wustl.edu	37	3	130159400	130159400	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	130159400	130159400	C	T	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	missense	c.6218	p.T2073I	0.007	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752				53	0	0	40	4	9.09091
COL6A6	0	genome.wustl.edu	37	3	130289784	130289784	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	130289784	130289784	G	A	SNP	COL6A6	ENST00000358511	human	ensembl	74_37	+1	known	missense	c.2524	p.G842S	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384				69	0	0	35	12	25.5319
DBR1	0	genome.wustl.edu	37	3	137886142	137886142	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	137886142	137886142	C	T	SNP	DBR1	ENST00000477557	human	ensembl	74_37	-1	known	missense	c.328	p.A110T	1.000	pfam_PEstase_dom	pfam_PEstase_dom	-	no_errors	DBR1	HGNC	ENSG00000138231				61	0	0	36	3	7.69231
ATP1B3	0	genome.wustl.edu	37	3	141626091	141626091	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	141626091	141626091	T	C	SNP	ATP1B3	ENST00000286371	human	ensembl	74_37	+1	known	silent	c.321	p.I107	0.000	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	-	no_errors	ATP1B3	HGNC	ENSG00000069849				57	0	0	46	15	24.5902
PAQR9	0	genome.wustl.edu	37	3	142681357	142681357	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	142681357	142681357	G	T	SNP	PAQR9	ENST00000340634	human	ensembl	74_37	-1	known	missense	c.822	p.F274L	0.443	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR9	HGNC	ENSG00000188582				101	0	0	111	22	16.5414
U2SURP	0	genome.wustl.edu	37	3	142735133	142735133	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	142735133	142735133	A	G	SNP	U2SURP	ENST00000473835	human	ensembl	74_37	+1	known	missense	c.356	p.E119G	1.000	NULL	pfam_Surp,pfam_RRM_dom,superfamily_Surp,superfamily_ENTH_VHS,smart_RRM_dom,smart_Surp,smart_CID_dom,pfscan_Surp,pfscan_RRM_dom	-	no_errors	U2SURP	HGNC	ENSG00000163714				146	0	0	104	33	24.0876
CHST2	0	genome.wustl.edu	37	3	142840509	142840509	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	142840509	142840509	C	T	SNP	CHST2	ENST00000309575	human	ensembl	74_37	+1	known	missense	c.851	p.P284L	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST2	HGNC	ENSG00000175040				15	0	0	5	3	37.5
P2RY13	0	genome.wustl.edu	37	3	151046205	151046205	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	151046205	151046205	G	A	SNP	P2RY13	ENST00000325602	human	ensembl	74_37	-1	known	silent	c.639	p.C213	0.277	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_P2Y13_rcpt,prints_GPCR_Rhodpsn,prints_P2Y14_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	P2RY13	HGNC	ENSG00000181631				109	0	0	48	10	17.2414
IGSF10	0	genome.wustl.edu	37	3	151164416	151164416	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	151164416	151164416	C	A	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	missense	c.3353	p.S1118I	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580				237	0	0	139	46	24.8649
DHX36	0	genome.wustl.edu	37	3	154002773	154002773	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	154002773	154002773	C	T	SNP	DHX36	ENST00000496811	human	ensembl	74_37	-1	known	missense	c.2035	p.A679T	1.000	pfam_Helicase-assoc_dom,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX36	HGNC	ENSG00000174953				124	0	0	74	14	15.9091
DHX36	0	genome.wustl.edu	37	3	154010350	154010350	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	154010350	154010350	G	A	SNP	DHX36	ENST00000496811	human	ensembl	74_37	-1	known	nonsense	c.1804	p.R602*	0.997	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX36	HGNC	ENSG00000174953				279	0	0	194	50	20.4918
CCNL1	0	genome.wustl.edu	37	3	156867109	156867109	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	156867109	156867109	C	T	SNP	CCNL1	ENST00000295926	human	ensembl	74_37	-1	known	missense	c.1199	p.R400Q	0.585	pirsf_Cyclin_L	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	-	no_errors	CCNL1	HGNC	ENSG00000163660				94	0	0	86	10	10.4167
LRRIQ4	0	genome.wustl.edu	37	3	169548401	169548401	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	169548401	169548401	C	T	SNP	LRRIQ4	ENST00000340806	human	ensembl	74_37	+1	known	missense	c.1316	p.A439V	0.341	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ4	HGNC	ENSG00000188306				32	0	0	16	8	33.3333
PHC3	0	genome.wustl.edu	37	3	169889147	169889147	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	169889147	169889147	T	A	SNP	PHC3	ENST00000497658	human	ensembl	74_37	-1	known	missense	c.428	p.N143I	0.000	NULL	NULL	-	no_errors	PHC3	HGNC	ENSG00000173889				18	0	0	18	3	14.2857
TNIK	0	genome.wustl.edu	37	3	170801980	170801980	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	170801980	170801980	G	A	SNP	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	nonsense	c.3133	p.R1045*	1.000	smart_Citron	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310				52	0	0	35	5	12.5
YEATS2-AS1	0	genome.wustl.edu	37	3	183526982	183526982	+	RNA	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	183526982	183526982	G	T	SNP	YEATS2-AS1	ENST00000425008	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.108	-	-	-	no_errors	YEATS2-AS1	HGNC	ENSG00000233885				177	0	0	159	27	14.5161
HTR3E	0	genome.wustl.edu	37	3	183824060	183824060	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	183824060	183824060	C	T	SNP	HTR3E	ENST00000335304	human	ensembl	74_37	+1	known	missense	c.1115	p.P372L	0.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Neur_channel	-	no_errors	HTR3E	HGNC	ENSG00000186038				89	0	0	37	17	31.4815
ABCF3	0	genome.wustl.edu	37	3	183908909	183908909	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	183908909	183908909	A	G	SNP	ABCF3	ENST00000429586	human	ensembl	74_37	+1	known	splice_site	c.1437-2	e16-2	1.000	-	-	-	no_errors	ABCF3	HGNC	ENSG00000161204				149	0	0	73	34	31.7757
CLCN2	0	genome.wustl.edu	37	3	184073564	184073564	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	184073564	184073564	C	T	SNP	CLCN2	ENST00000265593	human	ensembl	74_37	-1	known	missense	c.1088	p.R363H	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated,prints_Cl-channel-2	-	no_errors	CLCN2	HGNC	ENSG00000114859				53	0	0	22	4	15.3846
VPS8	0	genome.wustl.edu	37	3	184550540	184550540	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	184550540	184550540	G	A	SNP	VPS8	ENST00000287546	human	ensembl	74_37	+1	known	missense	c.286	p.D96N	1.000	superfamily_Quinonprotein_ADH-like_supfam	superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	VPS8	HGNC	ENSG00000156931				27	0	0	18	5	21.7391
MAP3K13	0	genome.wustl.edu	37	3	185183551	185183551	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	185183551	185183551	C	T	SNP	MAP3K13	ENST00000265026	human	ensembl	74_37	+1	known	missense	c.1405	p.R469C	1.000	pirsf_MAP3K12_MAP3K13,superfamily_Kinase-like_dom	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K13	HGNC	ENSG00000073803				211	1	0.471698	130	34	20.7317
ADIPOQ	0	genome.wustl.edu	37	3	186571971	186571971	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	186571971	186571971	A	G	SNP	ADIPOQ	ENST00000320741	human	ensembl	74_37	+1	known	splice_site	c.215-2	e2-2	0.979	-	-	-	no_errors	ADIPOQ	HGNC	ENSG00000181092				53	0	0	42	8	16
RTP1	0	genome.wustl.edu	37	3	186917577	186917577	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	186917577	186917577	G	A	SNP	RTP1	ENST00000312295	human	ensembl	74_37	+1	known	missense	c.511	p.G171S	0.984	NULL	NULL	-	no_errors	RTP1	HGNC	ENSG00000175077				57	0	0	43	3	6.52174
MUC4	0	genome.wustl.edu	37	3	195507926	195507926	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	195507926	195507926	C	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.10525	p.G3509S	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				9	0	0	1	3	75
KCNH8	0	genome.wustl.edu	37	3	19559535	19559535	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	19559535	19559535	C	G	SNP	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	missense	c.2588	p.T863S	1.000	superfamily_tRNA-bd_arm	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960				60	0	0	27	16	37.2093
TFRC	0	genome.wustl.edu	37	3	195789785	195789785	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	195789785	195789785	A	G	SNP	TFRC	ENST00000360110	human	ensembl	74_37	-1	known	silent	c.1344	p.I448	0.776	pfam_Peptidase_M28	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	TFRC	HGNC	ENSG00000072274				71	0	0	62	11	15.0685
TM4SF19	0	genome.wustl.edu	37	3	196054330	196054330	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	196054330	196054330	G	A	SNP	TM4SF19	ENST00000273695	human	ensembl	74_37	-1	known	silent	c.132	p.T44	0.999	pfam_L6_membrane	pfam_L6_membrane	-	no_errors	TM4SF19	HGNC	ENSG00000145107				152	0	0	108	19	14.9606
BDH1	0	genome.wustl.edu	37	3	197241135	197241135	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	197241135	197241135	C	A	SNP	BDH1	ENST00000358186	human	ensembl	74_37	-1	known	missense	c.562	p.G188C	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	BDH1	HGNC	ENSG00000161267				53	0	0	30	5	14.2857
NKIRAS1	0	genome.wustl.edu	37	3	23942333	23942333	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	23942333	23942333	T	C	SNP	NKIRAS1	ENST00000388759	human	ensembl	74_37	-1	known	missense	c.302	p.K101R	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Ras,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Ras,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	NKIRAS1	HGNC	ENSG00000197885				65	0	0	48	10	17.2414
SCN5A	0	genome.wustl.edu	37	3	38618168	38618168	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	38618168	38618168	C	A	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.3495	p.E1165D	1.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				19	0	0	16	5	23.8095
SCN10A	0	genome.wustl.edu	37	3	38739984	38739984	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	38739984	38739984	C	T	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.4727	p.R1576H	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				116	0	0	81	16	16.4948
SCN10A	0	genome.wustl.edu	37	3	38768416	38768416	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	38768416	38768416	C	T	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.2768	p.R923H	0.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				209	0	0	145	11	7.05128
SCN11A	0	genome.wustl.edu	37	3	38950583	38950583	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	38950583	38950583	C	G	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	missense	c.1204	p.A402P	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356				198	0	0	151	15	9.03614
SCN11A	0	genome.wustl.edu	37	3	38950604	38950604	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	38950604	38950604	T	G	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	missense	c.1183	p.T395P	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356				182	0	0	133	12	8.27586
ULK4	0	genome.wustl.edu	37	3	41288379	41288379	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	41288379	41288379	G	A	SNP	ULK4	ENST00000489118	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ULK4	HGNC	ENSG00000168038				21	0	0	18	6	25
ANO10	0	genome.wustl.edu	37	3	43596770	43596770	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	43596770	43596770	C	A	SNP	ANO10	ENST00000292246	human	ensembl	74_37	-1	known	missense	c.1668	p.Q556H	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO10	HGNC	ENSG00000160746				93	0	0	67	9	11.8421
ZNF445	0	genome.wustl.edu	37	3	44490207	44490207	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	44490207	44490207	T	C	SNP	ZNF445	ENST00000396077	human	ensembl	74_37	-1	known	missense	c.956	p.N319S	0.000	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF445	HGNC	ENSG00000185219				42	0	0	20	6	23.0769
ZNF35	0	genome.wustl.edu	37	3	44700257	44700257	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	44700257	44700257	A	C	SNP	ZNF35	ENST00000396056	human	ensembl	74_37	+1	known	missense	c.402	p.K134N	0.578	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF35	HGNC	ENSG00000169981				85	0	0	57	4	6.55738
CLEC3B	0	genome.wustl.edu	37	3	45077258	45077258	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	45077258	45077258	C	T	SNP	CLEC3B	ENST00000296130	human	ensembl	74_37	+1	known	missense	c.451	p.R151C	0.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC3B	HGNC	ENSG00000163815				90	0	0	58	10	14.7059
XCR1	0	genome.wustl.edu	37	3	46062922	46062922	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	46062922	46062922	G	A	SNP	XCR1	ENST00000309285	human	ensembl	74_37	-1	known	missense	c.518	p.S173L	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_XCR1,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Brdyknn_rcpt	-	no_errors	XCR1	HGNC	ENSG00000173578				60	0	0	41	5	10.8696
CCR3	0	genome.wustl.edu	37	3	46307587	46307587	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	46307587	46307587	G	A	SNP	CCR3	ENST00000545097	human	ensembl	74_37	+1	known	missense	c.1001	p.R334H	0.002	pfam_7TM_GPCR_olfarory/Srsx,prints_Chemokine_rcpt,prints_Chemokine_CCR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR3,prints_Chemokine_CCR1	-	no_errors	CCR3	HGNC	ENSG00000183625				72	0	0	65	11	14.4737
LRRC2	0	genome.wustl.edu	37	3	46560523	46560523	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	46560523	46560523	G	T	SNP	LRRC2	ENST00000296144	human	ensembl	74_37	-1	known	missense	c.1097	p.S366Y	0.992	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC2	HGNC	ENSG00000163827				210	0	0	135	40	22.8571
CELSR3	0	genome.wustl.edu	37	3	48696844	48696844	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	48696844	48696844	C	A	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.3224	p.R1075L	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				255	0	0	145	41	22.043
LAMB2	0	genome.wustl.edu	37	3	49160752	49160752	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	49160752	49160752	C	T	SNP	LAMB2	ENST00000305544	human	ensembl	74_37	-1	known	missense	c.4037	p.R1346H	0.456	NULL	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037				163	0	0	106	28	20.8955
APEH	0	genome.wustl.edu	37	3	49716378	49716378	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	49716378	49716378	G	A	SNP	APEH	ENST00000296456	human	ensembl	74_37	+1	known	missense	c.1154	p.R385Q	1.000	NULL	pfam_Peptidase_S9,pfam_AB_hydrolase_1,pfam_Dienelactn_hydro	-	no_errors	APEH	HGNC	ENSG00000164062				106	0	0	50	15	23.0769
HEMK1	0	genome.wustl.edu	37	3	50617831	50617831	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	50617831	50617831	C	T	SNP	HEMK1	ENST00000232854	human	ensembl	74_37	+1	known	missense	c.1000	p.R334W	0.432	NULL	pfam_Small_mtfrase_dom,pfam_RNA_methylase_dom,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_RNA_MeTrfase_RsmD,pfam_Methyltransf_11,prints_D21N6_MeTrfase,tigrfam_Release_fac_Glu-N5_MeTfrase,tigrfam_Modification_methylase_HemK	-	no_errors	HEMK1	HGNC	ENSG00000114735				75	0	0	61	7	10.2941
PPM1M	0	genome.wustl.edu	37	3	52282240	52282240	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	52282240	52282240	G	A	SNP	PPM1M	ENST00000457351	human	ensembl	74_37	+1	known	missense	c.782	p.R261Q	1.000	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1M	HGNC	ENSG00000164088				31	0	0	16	4	20
GLT8D1	0	genome.wustl.edu	37	3	52730630	52730630	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	52730630	52730630	A	C	SNP	GLT8D1	ENST00000266014	human	ensembl	74_37	-1	known	missense	c.375	p.I125M	0.812	pfam_Glyco_trans_8	pfam_Glyco_trans_8	-	no_errors	GLT8D1	HGNC	ENSG00000016864				76	0	0	69	4	5.47945
ITIH4	0	genome.wustl.edu	37	3	52860835	52860835	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	52860835	52860835	C	T	SNP	ITIH4	ENST00000266041	human	ensembl	74_37	-1	known	missense	c.491	p.R164Q	0.007	NULL	pfam_VIT,pfam_ITI_HC_C,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH4	HGNC	ENSG00000055955				86	0	0	55	8	12.6984
PRKCD	0	genome.wustl.edu	37	3	53212511	53212511	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	53212511	53212511	C	T	SNP	PRKCD	ENST00000330452	human	ensembl	74_37	+1	known	nonsense	c.73	p.Q25*	0.996	superfamily_C2_dom,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	PRKCD	HGNC	ENSG00000163932				78	0	0	34	13	27.6596
CACNA1D	0	genome.wustl.edu	37	3	53783318	53783318	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	53783318	53783318	C	T	SNP	CACNA1D	ENST00000288139	human	ensembl	74_37	+1	known	missense	c.3398	p.S1133L	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_LVDCC_a1dsu	-	no_errors	CACNA1D	HGNC	ENSG00000157388				53	0	0	35	8	18.6047
ERC2	0	genome.wustl.edu	37	3	56468581	56468581	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	56468581	56468581	G	A	SNP	ERC2	ENST00000288221	human	ensembl	74_37	-1	known	missense	c.455	p.A152V	1.000	pfam_CAZ_cplx_RIM-bd_prot	pfam_CAZ_cplx_RIM-bd_prot,superfamily_Prefoldin	-	no_errors	ERC2	HGNC	ENSG00000187672				258	0	0	184	36	16.3636
PDE12	0	genome.wustl.edu	37	3	57545470	57545470	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	57545470	57545470	C	T	SNP	PDE12	ENST00000311180	human	ensembl	74_37	+1	known	silent	c.1569	p.S523	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	PDE12	HGNC	ENSG00000174840				157	0	0	99	25	20.1613
FLNB	0	genome.wustl.edu	37	3	58089736	58089736	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	58089736	58089736	G	A	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.1534	p.A512T	0.003	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				128	0	0	87	26	23.0088
FAM107A	0	genome.wustl.edu	37	3	58552332	58552332	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	58552332	58552332	C	T	SNP	FAM107A	ENST00000360997	human	ensembl	74_37	-1	known	missense	c.418	p.E140K	0.035	NULL	pfam_DUF1151	-	no_errors	FAM107A	HGNC	ENSG00000168309				134	0	0	94	11	10.4762
C3orf67	0	genome.wustl.edu	37	3	58792166	58792166	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	58792166	58792166	C	T	SNP	C3orf67	ENST00000482387	human	ensembl	74_37	-1	known	missense	c.1817	p.R606H	0.972	NULL	NULL	-	no_errors	C3orf67	HGNC	ENSG00000163689				82	0	0	58	9	13.4328
PTPRG	0	genome.wustl.edu	37	3	61975386	61975386	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	61975386	61975386	C	T	SNP	PTPRG	ENST00000474889	human	ensembl	74_37	+1	known	missense	c.278	p.A93V	0.978	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRG	HGNC	ENSG00000144724				82	0	0	68	8	10.5263
ADAMTS9	0	genome.wustl.edu	37	3	64580089	64580089	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	64580089	64580089	C	A	SNP	ADAMTS9	ENST00000498707	human	ensembl	74_37	-1	known	missense	c.4201	p.G1401C	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS9	HGNC	ENSG00000163638				231	0	0	182	12	6.18557
SLC25A26	0	genome.wustl.edu	37	3	66419942	66419942	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	66419942	66419942	A	G	SNP	SLC25A26	ENST00000354883	human	ensembl	74_37	+1	known	silent	c.609	p.A203	0.876	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A26	HGNC	ENSG00000144741				10	0	0	4	7	63.6364
LRIG1	0	genome.wustl.edu	37	3	66467568	66467568	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	66467568	66467568	G	A	SNP	LRIG1	ENST00000273261	human	ensembl	74_37	-1	known	missense	c.488	p.P163L	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG1	HGNC	ENSG00000144749				317	0	0	249	36	12.6316
FOXP1	0	genome.wustl.edu	37	3	71247446	71247446	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	71247446	71247446	G	A	SNP	FOXP1	ENST00000318789	human	ensembl	74_37	-1	known	silent	c.87	p.C29	0.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	-	no_errors	FOXP1	HGNC	ENSG00000114861				290	0	0	174	64	26.8908
VGLL3	0	genome.wustl.edu	37	3	87027842	87027842	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	87027842	87027842	G	A	SNP	VGLL3	ENST00000398399	human	ensembl	74_37	-1	known	silent	c.237	p.A79	1.000	NULL	pfam_Vg_Tdu,smart_TDU_repeat	-	no_errors	VGLL3	HGNC	ENSG00000206538				77	0	0	36	16	30.7692
SRGAP3	0	genome.wustl.edu	37	3	9097969	9097969	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	9097969	9097969	C	T	SNP	SRGAP3	ENST00000383836	human	ensembl	74_37	-1	known	missense	c.1073	p.R358H	1.000	NULL	pfam_RhoGAP_dom,pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_FCH_dom,smart_RhoGAP_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	SRGAP3	HGNC	ENSG00000196220				133	0	0	107	6	5.30973
SETD5	0	genome.wustl.edu	37	3	9483391	9483391	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	9483391	9483391	C	T	SNP	SETD5	ENST00000402198	human	ensembl	74_37	+1	known	nonsense	c.925	p.Q309*	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SETD5	HGNC	ENSG00000168137				171	0	0	108	18	14.2857
COL8A1	0	genome.wustl.edu	37	3	99514689	99514689	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	99514689	99514689	G	A	SNP	COL8A1	ENST00000261037	human	ensembl	74_37	+1	known	silent	c.1944	p.P648	0.236	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	COL8A1	HGNC	ENSG00000144810				98	0	0	67	11	14.1026
DAPP1	0	genome.wustl.edu	37	4	100789327	100789327	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	100789327	100789327	G	A	SNP	DAPP1	ENST00000512369	human	ensembl	74_37	+1	known	silent	c.828	p.S276	0.004	NULL	pfam_SH2,pfam_Pleckstrin_homology,smart_SH2,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH2,prints_SH2	-	no_errors	DAPP1	HGNC	ENSG00000070190				85	0	0	47	9	16.0714
CENPE	0	genome.wustl.edu	37	4	104103997	104103997	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	104103997	104103997	G	A	SNP	CENPE	ENST00000265148	human	ensembl	74_37	-1	known	silent	c.885	p.S295	0.680	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_STAT_TF_coiled-coil,superfamily_Signal_recog_particl_SRP54_hlx,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	CENPE	HGNC	ENSG00000138778				97	0	0	76	28	26.9231
AIMP1	0	genome.wustl.edu	37	4	107246152	107246152	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	107246152	107246152	C	T	SNP	AIMP1	ENST00000394701	human	ensembl	74_37	+1	known	missense	c.58	p.R20C	1.000	NULL	pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold,superfamily_t-SNARE,pfscan_tRNA-bd_dom	-	no_errors	AIMP1	HGNC	ENSG00000164022				48	0	0	28	6	17.6471
CAMK2D	0	genome.wustl.edu	37	4	114436226	114436226	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	114436226	114436226	C	T	SNP	CAMK2D	ENST00000454265	human	ensembl	74_37	-1	known	missense	c.818	p.C273Y	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2D	HGNC	ENSG00000145349				161	0	0	117	25	17.6056
TRAM1L1	0	genome.wustl.edu	37	4	118005620	118005620	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	118005620	118005620	G	A	SNP	TRAM1L1	ENST00000310754	human	ensembl	74_37	-1	known	silent	c.930	p.Y310	0.002	pfam_TLC-dom,smart_TLC-dom,pirsf_Translocation_assoc_membrane,pfscan_TLC-dom	pfam_TRAM1,pfam_TLC-dom,smart_TLC-dom,pirsf_Translocation_assoc_membrane,pfscan_TLC-dom	-	no_errors	TRAM1L1	HGNC	ENSG00000174599				140	0	0	115	10	8
TRPC3	0	genome.wustl.edu	37	4	122853626	122853626	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	122853626	122853626	G	A	SNP	TRPC3	ENST00000379645	human	ensembl	74_37	-1	known	missense	c.787	p.H263Y	1.000	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPC3_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC3	HGNC	ENSG00000138741				51	0	0	46	7	13.2075
ANKRD50	0	genome.wustl.edu	37	4	125590320	125590320	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	125590320	125590320	C	T	SNP	ANKRD50	ENST00000504087	human	ensembl	74_37	-1	known	missense	c.4112	p.S1371N	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD50	HGNC	ENSG00000151458				146	0	0	88	22	20
FAT4	0	genome.wustl.edu	37	4	126238618	126238618	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	126238618	126238618	C	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.1052	p.P351Q	0.985	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				65	0	0	53	9	14.5161
FAT4	0	genome.wustl.edu	37	4	126239735	126239735	+	Silent	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	126239735	126239735	T	G	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	silent	c.2169	p.T723	0.240	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				87	0	0	52	18	25.7143
FAT4	0	genome.wustl.edu	37	4	126372007	126372007	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	126372007	126372007	G	T	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.9836	p.C3279F	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				95	0	0	49	16	24.6154
FAT4	0	genome.wustl.edu	37	4	126373015	126373015	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	126373015	126373015	G	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.10844	p.R3615Q	0.819	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				145	0	0	92	17	15.5963
FAT4	0	genome.wustl.edu	37	4	126373581	126373581	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	126373581	126373581	G	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.11410	p.D3804N	1.000	pfscan_EG-like_dom	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				107	0	0	59	21	26.25
TBC1D9	0	genome.wustl.edu	37	4	141583179	141583179	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	141583179	141583179	C	T	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	silent	c.1671	p.T557	0.005	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436				168	0	0	134	15	10.0671
OTUD4	0	genome.wustl.edu	37	4	146064586	146064586	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	146064586	146064586	A	G	SNP	OTUD4	ENST00000447906	human	ensembl	74_37	-1	known	silent	c.1614	p.D538	0.864	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD4	HGNC	ENSG00000164164				42	0	0	32	4	11.1111
FBXW7	0	genome.wustl.edu	37	4	153247366	153247366	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	153247366	153247366	C	T	SNP	FBXW7	ENST00000281708	human	ensembl	74_37	-1	known	missense	c.1436	p.R479Q	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC	ENSG00000109670				90	0	0	59	9	13.2353
DCHS2	0	genome.wustl.edu	37	4	155156861	155156861	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	155156861	155156861	G	T	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	silent	c.7578	p.S2526	0.001	smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410				113	0	0	66	10	13.1579
GUCY1B3	0	genome.wustl.edu	37	4	156710914	156710914	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	156710914	156710914	C	T	SNP	GUCY1B3	ENST00000264424	human	ensembl	74_37	+1	known	missense	c.346	p.R116C	1.000	pfam_Heme_NO-bd,superfamily_NO_sig/Golgi_transp_ligand-bd	pfam_Haem_no_assoc-bd,pfam_A/G_cyclase,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1B3	HGNC	ENSG00000061918				124	0	0	78	29	27.1028
BST1	0	genome.wustl.edu	37	4	15733442	15733442	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	15733442	15733442	G	A	SNP	BST1	ENST00000265016	human	ensembl	74_37	+1	known	missense	c.931	p.V311M	0.037	NULL	pfam_ADP-ribosyl_cyclase	-	no_errors	BST1	HGNC	ENSG00000109743				27	0	0	20	3	13.0435
CPE	0	genome.wustl.edu	37	4	166403505	166403505	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	166403505	166403505	C	T	SNP	CPE	ENST00000402744	human	ensembl	74_37	+1	known	missense	c.784	p.R262W	0.724	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPE	HGNC	ENSG00000109472				99	0	0	83	15	15.3061
TENM3	0	genome.wustl.edu	37	4	183721292	183721292	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	183721292	183721292	G	A	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	missense	c.7888	p.A2630T	0.999	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336				11	0	0	2	4	66.6667
MLF1IP	0	genome.wustl.edu	37	4	185618812	185618812	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	185618812	185618812	C	T	SNP	MLF1IP	ENST00000281453	human	ensembl	74_37	-1	known	missense	c.1132	p.V378I	0.000	NULL	NULL	-	no_errors	MLF1IP	HGNC	ENSG00000151725				40	0	0	30	11	26.8293
FAT1	0	genome.wustl.edu	37	4	187519257	187519257	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	187519257	187519257	G	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	silent	c.12126	p.A4042	0.286	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				59	0	0	49	3	5.76923
FAT1	0	genome.wustl.edu	37	4	187540947	187540947	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	187540947	187540947	C	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.6793	p.A2265T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				183	0	0	108	39	26.5306
DOK7	0	genome.wustl.edu	37	4	3495067	3495067	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	3495067	3495067	C	T	SNP	DOK7	ENST00000389653	human	ensembl	74_37	+1	known	missense	c.1354	p.R452W	0.011	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	DOK7	HGNC	ENSG00000175920				18	0	0	8	3	27.2727
LRPAP1	0	genome.wustl.edu	37	4	3526677	3526677	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	3526677	3526677	G	A	SNP	LRPAP1	ENST00000500728	human	ensembl	74_37	-1	known	silent	c.306	p.D102	0.001	pfam_MG_RAP_rcpt_1,superfamily_MG_RAP_rcpt_1	pfam_Alpha_2_MRAP_C,pfam_MG_RAP_rcpt_1,superfamily_MG_RAP_rcpt_1	-	no_errors	LRPAP1	HGNC	ENSG00000163956				382	0	0	270	87	24.3697
KLF3	0	genome.wustl.edu	37	4	38682250	38682250	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	38682250	38682250	C	A	SNP	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	missense	c.4	p.L2I	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787				272	0	0	234	23	8.94942
PDS5A	0	genome.wustl.edu	37	4	39929664	39929664	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	39929664	39929664	G	A	SNP	PDS5A	ENST00000303538	human	ensembl	74_37	-1	known	missense	c.259	p.R87C	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5A	HGNC	ENSG00000121892				51	0	0	34	2	5.55556
RBM47	0	genome.wustl.edu	37	4	40438542	40438542	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	40438542	40438542	C	T	SNP	RBM47	ENST00000295971	human	ensembl	74_37	-1	known	missense	c.1246	p.G416R	1.000	tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	RBM47	HGNC	ENSG00000163694				261	0	0	182	31	14.554
ZBTB49	0	genome.wustl.edu	37	4	4322409	4322409	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	4322409	4322409	G	A	SNP	ZBTB49	ENST00000337872	human	ensembl	74_37	+1	known	missense	c.1664	p.R555H	0.999	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB49	HGNC	ENSG00000168826				85	0	0	56	5	8.19672
ZNF721	0	genome.wustl.edu	37	4	438000	438000	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	438000	438000	G	A	SNP	ZNF721	ENST00000511833	human	ensembl	74_37	-1	known	missense	c.256	p.R86C	0.010	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF721	HGNC	ENSG00000182903				64	0	0	39	4	9.30233
CNGA1	0	genome.wustl.edu	37	4	47938530	47938530	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	47938530	47938530	T	C	SNP	CNGA1	ENST00000402813	human	ensembl	74_37	-1	known	missense	c.2188	p.K730E	0.898	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA1	HGNC	ENSG00000198515				139	0	0	77	16	17.2043
SRD5A3-AS1	0	genome.wustl.edu	37	4	56230218	56230218	+	RNA	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	56230218	56230218	C	T	SNP	SRD5A3-AS1	ENST00000433175	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	SRD5A3-AS1	HGNC	ENSG00000249700				202	0	0	124	26	17.3333
EXOC1	0	genome.wustl.edu	37	4	56726616	56726616	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	56726616	56726616	T	C	SNP	EXOC1	ENST00000346134	human	ensembl	74_37	+1	known	missense	c.164	p.V55A	1.000	NULL	pfam_Exocyst_Exoc1/SEC3	-	no_errors	EXOC1	HGNC	ENSG00000090989				128	0	0	79	12	13.1868
JAKMIP1	0	genome.wustl.edu	37	4	6107625	6107625	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	6107625	6107625	C	T	SNP	JAKMIP1	ENST00000409021	human	ensembl	74_37	-1	known	missense	c.199	p.A67T	1.000	NULL	NULL	-	no_errors	JAKMIP1	HGNC	ENSG00000152969				69	0	0	49	18	26.8657
WFS1	0	genome.wustl.edu	37	4	6296830	6296830	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	6296830	6296830	A	G	SNP	WFS1	ENST00000226760	human	ensembl	74_37	+1	known	missense	c.775	p.I259V	1.000	NULL	NULL	-	no_errors	WFS1	HGNC	ENSG00000109501				137	1	0.724638	86	18	17.3077
PPP2R2C	0	genome.wustl.edu	37	4	6380228	6380228	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	6380228	6380228	A	G	SNP	PPP2R2C	ENST00000335585	human	ensembl	74_37	-1	known	silent	c.240	p.F80	0.991	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2C	HGNC	ENSG00000074211				178	0	0	101	42	29.3706
TADA2B	0	genome.wustl.edu	37	4	7055912	7055912	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	7055912	7055912	G	A	SNP	TADA2B	ENST00000310074	human	ensembl	74_37	+1	known	missense	c.394	p.V132M	1.000	pirsf_Transcriptional_adaptor_2	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_Znf_ZZ,smart_SANT/Myb,pirsf_Transcriptional_adaptor_2,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	TADA2B	HGNC	ENSG00000173011				19	0	0	15	6	28.5714
ACOX3	0	genome.wustl.edu	37	4	8390919	8390919	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	8390919	8390919	G	A	SNP	ACOX3	ENST00000356406	human	ensembl	74_37	-1	known	silent	c.1518	p.A506	0.088	superfamily_AcylCo_DH/oxidase_C,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_AcylCo_DH/oxidase_C,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX3	HGNC	ENSG00000087008				51	0	0	35	3	7.89474
WDFY3	0	genome.wustl.edu	37	4	85708634	85708634	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	85708634	85708634	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	splice_site	c.3901+1	e20+1	1.000	-	-	-	no_errors	WDFY3	HGNC	ENSG00000163625				56	0	0	46	4	8
NAP1L5	0	genome.wustl.edu	37	4	89618768	89618768	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	89618768	89618768	G	A	SNP	NAP1L5	ENST00000323061	human	ensembl	74_37	-1	known	silent	c.138	p.S46	0.004	NULL	pfam_NAP_family	-	no_errors	NAP1L5	HGNC	ENSG00000177432				157	0	0	116	9	7.2
MMRN1	0	genome.wustl.edu	37	4	90816212	90816212	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	90816212	90816212	T	C	SNP	MMRN1	ENST00000264790	human	ensembl	74_37	+1	known	silent	c.90	p.P30	0.031	NULL	pfam_C1q,pfam_EMI_domain,pfam_EG-like_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MMRN1	HGNC	ENSG00000138722				134	0	0	119	17	12.5
TSPAN5	0	genome.wustl.edu	37	4	99397420	99397420	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	99397420	99397420	A	C	SNP	TSPAN5	ENST00000305798	human	ensembl	74_37	-1	known	missense	c.661	p.C221G	1.000	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN5	HGNC	ENSG00000168785				97	0	0	76	8	9.52381
PAM	0	genome.wustl.edu	37	5	102285672	102285672	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	102285672	102285672	A	C	SNP	PAM	ENST00000304400	human	ensembl	74_37	+1	known	missense	c.791	p.Q264P	1.000	superfamily_PHM/PNGase_F_dom,prints_Pep_amidat_mOase	pfam_NHL_repeat,pfam_Cu2_ascorb_mOase_N,superfamily_PHM/PNGase_F_dom,pfscan_NHL_repeat_subgr,prints_Pep_amidat_mOase	-	no_errors	PAM	HGNC	ENSG00000145730				71	0	0	40	8	16.6667
CTNND2	0	genome.wustl.edu	37	5	11384809	11384809	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	11384809	11384809	G	A	SNP	CTNND2	ENST00000304623	human	ensembl	74_37	-1	known	missense	c.1145	p.T382M	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND2	HGNC	ENSG00000169862				27	0	0	29	7	19.4444
RAD50	0	genome.wustl.edu	37	5	131931471	131931471	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	131931471	131931471	C	T	SNP	RAD50	ENST00000265335	human	ensembl	74_37	+1	known	missense	c.2176	p.R726C	1.000	superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	pfam_Rad50_Zn_hook,superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	-	no_errors	RAD50	HGNC	ENSG00000113522				103	0	0	62	21	25.3012
CLPTM1L	0	genome.wustl.edu	37	5	1339036	1339036	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	1339036	1339036	C	T	SNP	CLPTM1L	ENST00000320895	human	ensembl	74_37	-1	known	missense	c.538	p.A180T	1.000	pfam_CLPTM1	pfam_CLPTM1	-	no_errors	CLPTM1L	HGNC	ENSG00000049656				136	0	0	73	18	19.7802
C5orf20	0	genome.wustl.edu	37	5	134782702	134782702	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	134782702	134782702	C	T	SNP	C5orf20	ENST00000503143	human	ensembl	74_37	-1	known	missense	c.97	p.E33K	0.002	NULL	NULL	-	no_errors	C5orf20	HGNC	ENSG00000251380				27	0	0	15	3	16.6667
BRD8	0	genome.wustl.edu	37	5	137476521	137476521	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	137476521	137476521	C	T	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	missense	c.3488	p.R1163H	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983				394	0	0	267	62	18.845
CDC25C	0	genome.wustl.edu	37	5	137661709	137661709	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	137661709	137661709	C	T	SNP	CDC25C	ENST00000323760	human	ensembl	74_37	-1	known	splice_site	c.369+1	e4+1	1.000	-	-	-	no_errors	CDC25C	HGNC	ENSG00000158402				125	0	0	90	8	8.16327
EGR1	0	genome.wustl.edu	37	5	137802862	137802862	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	137802862	137802862	G	A	SNP	EGR1	ENST00000239938	human	ensembl	74_37	+1	known	missense	c.724	p.A242T	0.576	NULL	pfam_DUF3432,pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR1	HGNC	ENSG00000120738				131	0	0	83	18	17.8218
SLC4A9	0	genome.wustl.edu	37	5	139739839	139739839	+	Silent	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	139739839	139739839	A	C	SNP	SLC4A9	ENST00000230993	human	ensembl	74_37	+1	known	silent	c.18	p.P6	1.000	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A9	HGNC	ENSG00000113073				43	0	0	23	5	17.8571
SLC4A9	0	genome.wustl.edu	37	5	139747338	139747338	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	139747338	139747338	G	T	SNP	SLC4A9	ENST00000230993	human	ensembl	74_37	+1	known	missense	c.2281	p.V761L	1.000	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A9	HGNC	ENSG00000113073				55	0	0	50	5	9.09091
ANKHD1	0	genome.wustl.edu	37	5	139781730	139781730	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	139781730	139781730	G	A	SNP	ANKHD1	ENST00000297183	human	ensembl	74_37	+1	known	missense	c.178	p.G60S	0.994	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKHD1	HGNC	ENSG00000131503				19	0	0	8	4	33.3333
PCDHA2	0	genome.wustl.edu	37	5	140174689	140174689	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140174689	140174689	G	A	SNP	PCDHA2	ENST00000526136	human	ensembl	74_37	+1	known	missense	c.140	p.R47H	0.972	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969				160	1	0.621118	105	29	21.6418
PCDHA2	0	genome.wustl.edu	37	5	140176040	140176040	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140176040	140176040	G	A	SNP	PCDHA2	ENST00000526136	human	ensembl	74_37	+1	known	silent	c.1491	p.R497	0.927	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969				165	0	0	124	14	10.1449
PCDHA3	0	genome.wustl.edu	37	5	140182244	140182244	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140182244	140182244	G	A	SNP	PCDHA3	ENST00000522353	human	ensembl	74_37	+1	known	missense	c.1462	p.A488T	0.995	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA3	HGNC	ENSG00000255408				249	0	0	183	15	7.57576
PCDHA5	0	genome.wustl.edu	37	5	140203136	140203136	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140203136	140203136	G	A	SNP	PCDHA5	ENST00000529859	human	ensembl	74_37	+1	known	silent	c.1776	p.K592	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA5	HGNC	ENSG00000204965				142	0	0	79	31	28.1818
PCDHA6	0	genome.wustl.edu	37	5	140208845	140208845	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140208845	140208845	C	T	SNP	PCDHA6	ENST00000529310	human	ensembl	74_37	+1	known	missense	c.1169	p.T390M	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA6	HGNC	ENSG00000081842				311	0	0	188	56	22.9508
PCDHA8	0	genome.wustl.edu	37	5	140223022	140223022	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140223022	140223022	G	A	SNP	PCDHA8	ENST00000531613	human	ensembl	74_37	+1	known	missense	c.2116	p.A706T	0.831	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962				147	0	0	93	24	20.5128
PCDHA10	0	genome.wustl.edu	37	5	140237301	140237301	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140237301	140237301	C	T	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	silent	c.1668	p.D556	0.921	superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120				143	0	0	95	16	14.4144
PCDHA13	0	genome.wustl.edu	37	5	140263462	140263462	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140263462	140263462	G	A	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	missense	c.1609	p.A537T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389				255	0	0	188	33	14.9321
PCDHA13	0	genome.wustl.edu	37	5	140263782	140263782	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140263782	140263782	G	A	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	silent	c.1929	p.P643	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389				128	0	0	98	19	16.2393
PCDHB3	0	genome.wustl.edu	37	5	140481823	140481823	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140481823	140481823	C	T	SNP	PCDHB3	ENST00000231130	human	ensembl	74_37	+1	known	silent	c.1590	p.R530	0.415	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB3	HGNC	ENSG00000113205				160	0	0	119	11	8.46154
PCDHB6	0	genome.wustl.edu	37	5	140530412	140530412	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140530412	140530412	G	A	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.574	p.E192K	0.964	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				188	0	0	154	30	16.3043
PCDHB6	0	genome.wustl.edu	37	5	140531180	140531180	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140531180	140531180	G	A	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.1342	p.A448T	0.000	superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				233	1	0.42735	186	48	20.5128
PCDHB8	0	genome.wustl.edu	37	5	140559448	140559448	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140559448	140559448	G	A	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	silent	c.1833	p.T611	0.247	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322				83	0	0	77	14	15.3846
PCDHB15	0	genome.wustl.edu	37	5	140627020	140627020	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140627020	140627020	G	A	SNP	PCDHB15	ENST00000231173	human	ensembl	74_37	+1	known	missense	c.1874	p.R625H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB15	HGNC	ENSG00000113248				125	0	0	94	6	6
PCDHGA1	0	genome.wustl.edu	37	5	140712198	140712198	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140712198	140712198	C	T	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	silent	c.1947	p.H649	0.978	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956				147	0	0	85	24	22.0183
PCDHGA1	0	genome.wustl.edu	37	5	140712241	140712241	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140712241	140712241	G	A	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	missense	c.1990	p.V664M	0.259	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956				158	0	0	80	20	20
PCDHGA2	0	genome.wustl.edu	37	5	140719675	140719675	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140719675	140719675	C	T	SNP	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	silent	c.1137	p.N379	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853				138	0	0	78	29	27.1028
PCDHGB2	0	genome.wustl.edu	37	5	140739737	140739737	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140739737	140739737	G	A	SNP	PCDHGB2	ENST00000522605	human	ensembl	74_37	+1	known	missense	c.35	p.R12Q	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB2	HGNC	ENSG00000253910				21	0	0	18	6	25
PCDHGB3	0	genome.wustl.edu	37	5	140751770	140751770	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140751770	140751770	G	A	SNP	PCDHGB3	ENST00000576222	human	ensembl	74_37	+1	known	nonsense	c.1809	p.W603*	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209				153	0	0	100	19	15.9664
PCDHGA7	0	genome.wustl.edu	37	5	140763761	140763761	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140763761	140763761	T	C	SNP	PCDHGA7	ENST00000518325	human	ensembl	74_37	+1	known	missense	c.1295	p.L432S	0.944	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA7	HGNC	ENSG00000253537				53	0	0	39	6	13.3333
PCDHGA7	0	genome.wustl.edu	37	5	140764588	140764588	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140764588	140764588	G	A	SNP	PCDHGA7	ENST00000518325	human	ensembl	74_37	+1	known	missense	c.2122	p.V708I	0.840	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA7	HGNC	ENSG00000253537				114	0	0	60	22	26.8293
PCDHGB4	0	genome.wustl.edu	37	5	140769384	140769384	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140769384	140769384	C	T	SNP	PCDHGB4	ENST00000519479	human	ensembl	74_37	+1	known	missense	c.1933	p.R645C	0.992	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB4	HGNC	ENSG00000253953				95	0	0	53	13	19.697
SPRY4	0	genome.wustl.edu	37	5	141694677	141694677	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	141694677	141694677	G	A	SNP	SPRY4	ENST00000344120	human	ensembl	74_37	-1	known	silent	c.66	p.S22	0.993	NULL	pfam_Sprouty	-	no_errors	SPRY4	HGNC	ENSG00000187678				68	0	0	37	5	11.9048
JAKMIP2	0	genome.wustl.edu	37	5	147024421	147024421	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	147024421	147024421	A	T	SNP	JAKMIP2	ENST00000265272	human	ensembl	74_37	-1	known	missense	c.1075	p.S359T	0.656	NULL	NULL	-	no_errors	JAKMIP2	HGNC	ENSG00000176049				147	0	0	110	18	14.0625
FBXO38	0	genome.wustl.edu	37	5	147781951	147781951	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	147781951	147781951	G	A	SNP	FBXO38	ENST00000340253	human	ensembl	74_37	+1	known	nonsense	c.467	p.W156*	1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO38	HGNC	ENSG00000145868				107	0	0	83	16	16.1616
FBXO38	0	genome.wustl.edu	37	5	147807059	147807059	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	147807059	147807059	C	T	SNP	FBXO38	ENST00000340253	human	ensembl	74_37	+1	known	silent	c.2202	p.G734	1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO38	HGNC	ENSG00000145868				99	0	0	69	10	12.6582
TNIP1	0	genome.wustl.edu	37	5	150436492	150436492	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	150436492	150436492	G	A	SNP	TNIP1	ENST00000315050	human	ensembl	74_37	-1	known	silent	c.462	p.D154	0.998	NULL	superfamily_ARM-type_fold	-	no_errors	TNIP1	HGNC	ENSG00000145901				57	0	0	34	6	15
GRIA1	0	genome.wustl.edu	37	5	153078486	153078486	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	153078486	153078486	C	T	SNP	GRIA1	ENST00000448073	human	ensembl	74_37	+1	known	silent	c.1335	p.Y445	0.504	pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511				138	0	0	72	22	23.4043
CYFIP2	0	genome.wustl.edu	37	5	156816266	156816266	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	156816266	156816266	G	A	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	missense	c.3352	p.E1118K	1.000	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP2	HGNC	ENSG00000055163				85	0	0	68	15	18.0723
ADAM19	0	genome.wustl.edu	37	5	156915311	156915311	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	156915311	156915311	G	A	SNP	ADAM19	ENST00000394020	human	ensembl	74_37	-1	known	missense	c.2518	p.R840W	1.000	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM19	HGNC	ENSG00000135074				253	0	0	156	55	26.0664
ATP10B	0	genome.wustl.edu	37	5	160042879	160042879	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	160042879	160042879	A	G	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	silent	c.2619	p.T873	0.055	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322				147	0	0	80	23	22.3301
GABRA6	0	genome.wustl.edu	37	5	161112944	161112944	+	RNA	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	161112944	161112944	G	C	SNP	GABRA6	ENST00000518888	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GABRA6	HGNC	ENSG00000145863				81	0	0	60	15	20
TENM2	0	genome.wustl.edu	37	5	167420177	167420177	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	167420177	167420177	G	A	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	silent	c.1176	p.A392	0.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934				77	0	0	50	9	15.2542
FBXW11	0	genome.wustl.edu	37	5	171305054	171305054	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	171305054	171305054	T	A	SNP	FBXW11	ENST00000265094	human	ensembl	74_37	-1	known	missense	c.869	p.E290V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW11	HGNC	ENSG00000072803				66	0	0	45	14	23.7288
CPEB4	0	genome.wustl.edu	37	5	173378931	173378931	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	173378931	173378931	A	G	SNP	CPEB4	ENST00000265085	human	ensembl	74_37	+1	known	silent	c.1770	p.P590	0.881	smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPEB4	HGNC	ENSG00000113742				69	0	0	44	5	10.2041
N4BP3	0	genome.wustl.edu	37	5	177546741	177546741	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	177546741	177546741	C	T	SNP	N4BP3	ENST00000274605	human	ensembl	74_37	+1	known	missense	c.157	p.R53C	1.000	NULL	NULL	-	no_errors	N4BP3	HGNC	ENSG00000145911				175	1	0.568182	129	19	12.8378
ZNF354C	0	genome.wustl.edu	37	5	178505905	178505905	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	178505905	178505905	G	A	SNP	ZNF354C	ENST00000315475	human	ensembl	74_37	+1	known	missense	c.472	p.G158R	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF354C	HGNC	ENSG00000177932				102	0	0	71	16	18.3908
TBC1D9B	0	genome.wustl.edu	37	5	179306124	179306124	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	179306124	179306124	C	T	SNP	TBC1D9B	ENST00000356834	human	ensembl	74_37	-1	known	missense	c.1490	p.R497H	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9B	HGNC	ENSG00000197226				38	0	0	22	2	8.33333
GFPT2	0	genome.wustl.edu	37	5	179739447	179739447	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	179739447	179739447	C	A	SNP	GFPT2	ENST00000253778	human	ensembl	74_37	-1	known	missense	c.1529	p.G510V	1.000	tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT2	HGNC	ENSG00000131459				75	0	0	51	13	20.3125
NDUFS6	0	genome.wustl.edu	37	5	1814469	1814469	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	1814469	1814469	C	T	SNP	NDUFS6	ENST00000274137	human	ensembl	74_37	+1	known	missense	c.203	p.A68V	1.000	pirsf_NADH_Ub_cplx-1_Fe-S_6_mit	pfam_Znf_CHCC,pirsf_NADH_Ub_cplx-1_Fe-S_6_mit	-	no_errors	NDUFS6	HGNC	ENSG00000145494				149	0	0	101	7	6.48148
IRX2	0	genome.wustl.edu	37	5	2748668	2748668	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	2748668	2748668	G	A	SNP	IRX2	ENST00000302057	human	ensembl	74_37	-1	known	missense	c.1154	p.T385M	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX2	HGNC	ENSG00000170561				87	0	0	55	11	16.6667
IRX2	0	genome.wustl.edu	37	5	2752884	2752884	+	RNA	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	2752884	2752884	C	T	SNP	IRX2	ENST00000502957	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IRX2	HGNC	ENSG00000170561				105	0	0	68	17	20
ADAMTS12	0	genome.wustl.edu	37	5	33624406	33624406	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	33624406	33624406	G	A	SNP	ADAMTS12	ENST00000504830	human	ensembl	74_37	-1	known	silent	c.2073	p.C691	0.641	prints_Peptidase_M12B_ADAM-TS	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS12	HGNC	ENSG00000151388				83	0	0	35	13	27.0833
SLC45A2	0	genome.wustl.edu	37	5	33947392	33947392	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	33947392	33947392	A	C	SNP	SLC45A2	ENST00000296589	human	ensembl	74_37	-1	known	missense	c.1244	p.I415S	0.999	superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A2	HGNC	ENSG00000164175				220	0	0	139	31	18.2353
NIPBL	0	genome.wustl.edu	37	5	37022491	37022491	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	37022491	37022491	T	C	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.5573	p.L1858S	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				37	0	0	25	6	19.3548
DAB2	0	genome.wustl.edu	37	5	39383287	39383287	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	39383287	39383287	G	A	SNP	DAB2	ENST00000320816	human	ensembl	74_37	-1	known	silent	c.774	p.N258	0.999	NULL	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	DAB2	HGNC	ENSG00000153071				136	0	0	115	9	7.25806
PRKAA1	0	genome.wustl.edu	37	5	40767586	40767586	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	40767586	40767586	G	A	SNP	PRKAA1	ENST00000354209	human	ensembl	74_37	-1	known	missense	c.848	p.A283V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PRKAA1	HGNC	ENSG00000132356				73	0	0	49	15	23.4375
SLC9A3	0	genome.wustl.edu	37	5	483524	483524	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	483524	483524	G	A	SNP	SLC9A3	ENST00000264938	human	ensembl	74_37	-1	known	missense	c.1006	p.R336C	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,superfamily_Reg_factor_effector_dom,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A3	HGNC	ENSG00000066230				20	0	0	6	5	45.4545
DHX29	0	genome.wustl.edu	37	5	54552344	54552344	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	54552344	54552344	G	A	SNP	DHX29	ENST00000251636	human	ensembl	74_37	-1	known	missense	c.4082	p.T1361M	0.996	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX29	HGNC	ENSG00000067248				67	0	0	44	10	18.5185
IL6ST	0	genome.wustl.edu	37	5	55236979	55236979	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	55236979	55236979	C	T	SNP	IL6ST	ENST00000336909	human	ensembl	74_37	-1	known	silent	c.2688	p.A896	0.000	NULL	pfam_IgC2-like_lig-bd,pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,pfam_Growth/epo_recpt_lig-bind,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL6ST	HGNC	ENSG00000134352				119	0	0	85	24	22.0183
HTR1A	0	genome.wustl.edu	37	5	63256583	63256583	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	63256583	63256583	C	A	SNP	HTR1A	ENST00000323865	human	ensembl	74_37	-1	known	nonsense	c.964	p.E322*	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT1A_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT1A_rcpt,prints_GPCR_Rhodpsn,prints_5HT_rcpt,prints_NPY_rcpt	-	no_errors	HTR1A	HGNC	ENSG00000178394				102	0	0	65	10	13.3333
MAST4	0	genome.wustl.edu	37	5	66459451	66459451	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	66459451	66459451	C	T	SNP	MAST4	ENST00000404260	human	ensembl	74_37	+1	known	missense	c.4453	p.R1485W	0.127	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST4	HGNC	ENSG00000069020				20	0	0	14	2	12.5
PIK3R1	0	genome.wustl.edu	37	5	67591106	67591106	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	67591106	67591106	A	G	SNP	PIK3R1	ENST00000396611	human	ensembl	74_37	+1	known	missense	c.1699	p.K567E	1.000	prints_PI3kinase_P85	pfam_SH2,pfam_RhoGAP_dom,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Guanylate-bd_C,smart_SH3_domain,smart_RhoGAP_dom,smart_SH2,pfscan_SH2,pfscan_SH3_domain,pfscan_RhoGAP_dom,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R1	HGNC	ENSG00000145675				124	0	0	82	12	12.766
SV2C	0	genome.wustl.edu	37	5	75428050	75428050	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	75428050	75428050	G	T	SNP	SV2C	ENST00000502798	human	ensembl	74_37	+1	known	missense	c.475	p.G159C	1.000	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2C	HGNC	ENSG00000122012				157	0	0	113	15	11.7188
CMYA5	0	genome.wustl.edu	37	5	79025669	79025669	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	79025669	79025669	C	T	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	nonsense	c.1081	p.Q361*	0.001	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309				23	0	0	12	3	20
THBS4	0	genome.wustl.edu	37	5	79366538	79366538	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	79366538	79366538	G	A	SNP	THBS4	ENST00000350881	human	ensembl	74_37	+1	known	missense	c.1525	p.E509K	0.959	pfam_Thrombospondin_3-like_rpt	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS4	HGNC	ENSG00000113296				148	0	0	69	26	27.3684
BRD9	0	genome.wustl.edu	37	5	865542	865542	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	865542	865542	G	A	SNP	BRD9	ENST00000467963	human	ensembl	74_37	-1	known	silent	c.1680	p.D560	0.968	NULL	pfam_DUF3512,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD9	HGNC	ENSG00000028310				121	1	0.819672	79	17	17.7083
CETN3	0	genome.wustl.edu	37	5	89703524	89703524	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	89703524	89703524	C	T	SNP	CETN3	ENST00000283122	human	ensembl	74_37	-1	known	missense	c.145	p.E49K	1.000	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CETN3	HGNC	ENSG00000153140				38	0	0	25	2	7.40741
GPR98	0	genome.wustl.edu	37	5	90159637	90159637	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	90159637	90159637	T	G	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.17819	p.L5940R	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				129	0	0	109	28	20.438
SEMA5A	0	genome.wustl.edu	37	5	9224864	9224864	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	9224864	9224864	G	A	SNP	SEMA5A	ENST00000382496	human	ensembl	74_37	-1	known	missense	c.568	p.R190C	0.020	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902				68	0	0	40	4	9.09091
TTC37	0	genome.wustl.edu	37	5	94852270	94852270	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	94852270	94852270	C	T	SNP	TTC37	ENST00000358746	human	ensembl	74_37	-1	known	missense	c.2536	p.A846T	1.000	pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC37	HGNC	ENSG00000198677				68	0	0	66	12	15.3846
ERAP1	0	genome.wustl.edu	37	5	96130807	96130807	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	96130807	96130807	G	A	SNP	ERAP1	ENST00000296754	human	ensembl	74_37	-1	known	missense	c.857	p.A286V	1.000	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ERAP1	HGNC	ENSG00000164307				47	0	0	37	5	11.9048
ELOVL2	0	genome.wustl.edu	37	6	10990047	10990047	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	10990047	10990047	C	T	SNP	ELOVL2	ENST00000354666	human	ensembl	74_37	-1	known	silent	c.654	p.T218	0.005	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL2	HGNC	ENSG00000197977				115	0	0	86	9	9.47368
FIG4	0	genome.wustl.edu	37	6	110146440	110146440	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	110146440	110146440	G	A	SNP	FIG4	ENST00000230124	human	ensembl	74_37	+1	known	missense	c.2696	p.R899Q	1.000	NULL	pfam_Syja_N,pfscan_Syja_N	-	no_errors	FIG4	HGNC	ENSG00000112367				103	0	0	71	6	7.79221
SLC22A16	0	genome.wustl.edu	37	6	110752462	110752462	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	110752462	110752462	A	G	SNP	SLC22A16	ENST00000368919	human	ensembl	74_37	-1	known	missense	c.1433	p.V478A	0.999	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A16	HGNC	ENSG00000004809				85	0	0	58	28	32.5581
REV3L	0	genome.wustl.edu	37	6	111650820	111650820	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	111650820	111650820	G	A	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	missense	c.8156	p.A2719V	1.000	pfam_DNA-dir_DNA_pol_B_multi_dom,smart_DNA-dir_DNA_pol_B	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413				193	0	0	142	30	17.4419
FAM26E	0	genome.wustl.edu	37	6	116836936	116836936	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	116836936	116836936	C	T	SNP	FAM26E	ENST00000368599	human	ensembl	74_37	+1	known	silent	c.714	p.S238	0.825	NULL	NULL	-	no_errors	FAM26E	HGNC	ENSG00000178033				154	0	0	79	21	21
RWDD1	0	genome.wustl.edu	37	6	116912077	116912077	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	116912077	116912077	A	G	SNP	RWDD1	ENST00000466444	human	ensembl	74_37	+1	known	missense	c.574	p.N192D	1.000	NULL	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pfscan_RWD-domain	-	no_errors	RWDD1	HGNC	ENSG00000111832				53	0	0	43	4	8.51064
KPNA5	0	genome.wustl.edu	37	6	117023264	117023264	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	117023264	117023264	C	T	SNP	KPNA5	ENST00000356348	human	ensembl	74_37	+1	known	missense	c.518	p.P173L	1.000	pfam_Armadillo,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,pfam_Importin-a_IBB,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA5	HGNC	ENSG00000196911				125	0	0	76	19	20
SOGA3	0	genome.wustl.edu	37	6	127796917	127796917	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	127796917	127796917	C	T	SNP	SOGA3	ENST00000368268	human	ensembl	74_37	-1	known	missense	c.2254	p.D752N	1.000	NULL	pfam_SOGA	-	no_errors	SOGA3	HGNC	ENSG00000214338				141	1	0.704225	132	12	8.33333
TAAR2	0	genome.wustl.edu	37	6	132938520	132938520	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	132938520	132938520	C	T	SNP	TAAR2	ENST00000367931	human	ensembl	74_37	-1	known	nonsense	c.825	p.W275*	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_TAAR_fam	-	no_errors	TAAR2	HGNC	ENSG00000146378				51	0	0	29	7	19.4444
TAAR2	0	genome.wustl.edu	37	6	132938576	132938576	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	132938576	132938576	C	T	SNP	TAAR2	ENST00000367931	human	ensembl	74_37	-1	known	missense	c.769	p.D257N	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_TAAR_fam	-	no_errors	TAAR2	HGNC	ENSG00000146378				80	0	0	36	13	26.5306
EYA4	0	genome.wustl.edu	37	6	133849878	133849878	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	133849878	133849878	T	C	SNP	EYA4	ENST00000355167	human	ensembl	74_37	+1	known	missense	c.1855	p.W619R	1.000	superfamily_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA4	HGNC	ENSG00000112319				258	0	0	205	27	11.6379
TNFAIP3	0	genome.wustl.edu	37	6	138200310	138200310	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	138200310	138200310	G	A	SNP	TNFAIP3	ENST00000237289	human	ensembl	74_37	+1	known	silent	c.1728	p.P576	0.000	NULL	pfam_Znf_A20,pfam_OTU,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	TNFAIP3	HGNC	ENSG00000118503				122	0	0	109	9	7.62712
HIVEP2	0	genome.wustl.edu	37	6	143091172	143091172	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	143091172	143091172	T	C	SNP	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	silent	c.4704	p.E1568	0.957	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818				170	0	0	115	26	18.4397
HIVEP2	0	genome.wustl.edu	37	6	143091178	143091178	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	143091178	143091178	T	C	SNP	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	silent	c.4698	p.S1566	0.037	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818				169	0	0	123	14	10.219
RAET1E	0	genome.wustl.edu	37	6	150210638	150210638	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	150210638	150210638	G	T	SNP	RAET1E	ENST00000357183	human	ensembl	74_37	-1	known	silent	c.468	p.T156	0.001	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	-	no_errors	RAET1E	HGNC	ENSG00000164520				144	0	0	124	21	14.4828
PLEKHG1	0	genome.wustl.edu	37	6	151153326	151153326	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	151153326	151153326	G	T	SNP	PLEKHG1	ENST00000358517	human	ensembl	74_37	+1	known	nonsense	c.3079	p.G1027*	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG1	HGNC	ENSG00000120278				130	0	0	91	26	22.2222
AKAP12	0	genome.wustl.edu	37	6	151669964	151669964	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	151669964	151669964	C	T	SNP	AKAP12	ENST00000253332	human	ensembl	74_37	+1	known	silent	c.438	p.I146	0.000	NULL	pfam_Pkinase-A_anch_WSK-motif,pfam_RII_binding_1	-	no_errors	AKAP12	HGNC	ENSG00000131016				107	0	0	77	22	22.2222
SYNE1	0	genome.wustl.edu	37	6	152540258	152540258	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	152540258	152540258	C	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.21924	p.E7308	0.996	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				109	0	0	79	15	15.9574
RGS17	0	genome.wustl.edu	37	6	153347651	153347651	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	153347651	153347651	C	A	SNP	RGS17	ENST00000206262	human	ensembl	74_37	-1	known	silent	c.147	p.G49	0.983	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS17	HGNC	ENSG00000091844				149	0	0	91	24	20.8696
OPRM1	0	genome.wustl.edu	37	6	154412320	154412320	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	154412320	154412320	G	A	SNP	OPRM1	ENST00000434900	human	ensembl	74_37	+1	known	missense	c.1156	p.V386I	0.914	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Neuropept_B/W_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Mu_opioid_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Somatstn_rcpt,prints_Neuropept_B/W_rcpt,prints_NPY_rcpt	-	no_errors	OPRM1	HGNC	ENSG00000112038				97	0	0	80	13	13.9785
CNKSR3	0	genome.wustl.edu	37	6	154771281	154771281	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	154771281	154771281	C	T	SNP	CNKSR3	ENST00000607772	human	ensembl	74_37	-1	known	missense	c.164	p.R55Q	0.988	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,pfscan_PDZ,pfscan_SAM	-	no_errors	CNKSR3	HGNC	ENSG00000153721				121	0	0	91	9	9
TIAM2	0	genome.wustl.edu	37	6	155561732	155561732	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	155561732	155561732	G	A	SNP	TIAM2	ENST00000456144	human	ensembl	74_37	+1	known	silent	c.3237	p.P1079	0.000	superfamily_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,superfamily_HR1_rho-bd,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM2	HGNC	ENSG00000146426				122	0	0	72	13	15.2941
SYNJ2	0	genome.wustl.edu	37	6	158497676	158497676	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	158497676	158497676	G	A	SNP	SYNJ2	ENST00000355585	human	ensembl	74_37	+1	known	missense	c.2311	p.E771K	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Syja_N,pfam_DUF1866,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ2	HGNC	ENSG00000078269				108	0	0	74	5	6.32911
KIF25	0	genome.wustl.edu	37	6	168439243	168439243	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	168439243	168439243	G	A	SNP	KIF25	ENST00000354419	human	ensembl	74_37	+1	known	missense	c.328	p.E110K	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF25	HGNC	ENSG00000125337				98	0	0	75	4	5.06329
FAM120B	0	genome.wustl.edu	37	6	170632250	170632250	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	170632250	170632250	C	A	SNP	FAM120B	ENST00000537664	human	ensembl	74_37	+1	known	silent	c.1887	p.T629	0.004	NULL	NULL	-	no_errors	FAM120B	HGNC	ENSG00000112584				89	0	0	54	19	26.0274
ZNF391	0	genome.wustl.edu	37	6	27368577	27368577	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	27368577	27368577	G	T	SNP	ZNF391	ENST00000244576	human	ensembl	74_37	+1	known	missense	c.428	p.G143V	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF391	HGNC	ENSG00000124613				138	0	0	112	13	10.4
WRNIP1	0	genome.wustl.edu	37	6	2783645	2783645	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	2783645	2783645	G	A	SNP	WRNIP1	ENST00000380773	human	ensembl	74_37	+1	known	missense	c.1492	p.E498K	1.000	NULL	pfam_MgsA_C,pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_ATPase_dyneun-rel_AAA,pfam_DUF815,pfam_IstB_ATP-bd,pfam_ATPase_AAA-2,superfamily_P-loop_NTPase,smart_Znf_Rad18_put,smart_AAA+_ATPase	-	no_errors	WRNIP1	HGNC	ENSG00000124535				46	0	0	24	9	27.2727
ZNF165	0	genome.wustl.edu	37	6	28053571	28053571	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	28053571	28053571	T	C	SNP	ZNF165	ENST00000377325	human	ensembl	74_37	+1	known	silent	c.313	p.L105	0.193	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF165	HGNC	ENSG00000197279				94	0	0	46	9	16.3636
OR2J1	0	genome.wustl.edu	37	6	29069544	29069544	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	29069544	29069544	T	C	SNP	OR2J1	ENST00000377171	human	ensembl	74_37	+1	known	silent	c.825	p.I275	0.634	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR2J1	HGNC	ENSG00000204702				118	0	0	73	18	19.7802
GABBR1	0	genome.wustl.edu	37	6	29595419	29595419	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	29595419	29595419	C	T	SNP	GABBR1	ENST00000377034	human	ensembl	74_37	-1	known	silent	c.501	p.R167	1.000	superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B1	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Sushi_SCR_CCP,superfamily_Peripla_BP_I,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,pfscan_Sushi_SCR_CCP,pfscan_GPCR_3_C	-	no_errors	GABBR1	HGNC	ENSG00000204681				10	0	0	4	3	42.8571
TRIM10	0	genome.wustl.edu	37	6	30122079	30122079	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	30122079	30122079	T	C	SNP	TRIM10	ENST00000449742	human	ensembl	74_37	-1	known	missense	c.1113	p.I371M	0.052	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM10	HGNC	ENSG00000204613				50	0	0	38	3	7.31707
TRIM39	0	genome.wustl.edu	37	6	30309680	30309680	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	30309680	30309680	G	A	SNP	TRIM39	ENST00000376656	human	ensembl	74_37	+1	known	missense	c.1201	p.D401N	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM39	HGNC	ENSG00000204599				72	0	0	50	10	16.6667
MDC1	0	genome.wustl.edu	37	6	30672977	30672977	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	30672977	30672977	G	A	SNP	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	missense	c.3983	p.T1328I	0.000	NULL	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337				399	1	0.25	243	52	17.6271
DDR1	0	genome.wustl.edu	37	6	30861185	30861185	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	30861185	30861185	C	T	SNP	DDR1	ENST00000376575	human	ensembl	74_37	+1	known	silent	c.1332	p.R444	0.222	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DDR1	HGNC	ENSG00000204580				30	0	0	18	5	21.7391
CDSN	0	genome.wustl.edu	37	6	31084004	31084004	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	31084004	31084004	G	A	SNP	CDSN	ENST00000376288	human	ensembl	74_37	-1	known	missense	c.1388	p.S463F	0.680	NULL	NULL	-	no_errors	CDSN	HGNC	ENSG00000204539				73	0	0	38	17	30.9091
NFKBIL1	0	genome.wustl.edu	37	6	31525862	31525862	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	31525862	31525862	G	A	SNP	NFKBIL1	ENST00000376148	human	ensembl	74_37	+1	known	missense	c.620	p.R207Q	0.945	NULL	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	NFKBIL1	HGNC	ENSG00000204498				44	0	0	18	9	33.3333
PRRC2A	0	genome.wustl.edu	37	6	31595588	31595588	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	31595588	31595588	A	G	SNP	PRRC2A	ENST00000376007	human	ensembl	74_37	+1	known	missense	c.1337	p.D446G	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2A	HGNC	ENSG00000204469				91	0	0	67	17	20.2381
HSPA1L	0	genome.wustl.edu	37	6	31778571	31778571	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	31778571	31778571	C	T	SNP	HSPA1L	ENST00000375654	human	ensembl	74_37	-1	known	silent	c.1179	p.L393	1.000	pfam_Hsp_70_fam,prints_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA1L	HGNC	ENSG00000204390				125	0	0	72	18	20
FKBPL	0	genome.wustl.edu	37	6	32096525	32096525	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	32096525	32096525	G	A	SNP	FKBPL	ENST00000375156	human	ensembl	74_37	-1	known	missense	c.1033	p.R345C	0.985	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	FKBPL	HGNC	ENSG00000204315				409	0	0	305	53	14.8045
COL11A2	0	genome.wustl.edu	37	6	33157112	33157112	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	33157112	33157112	G	A	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	missense	c.217	p.R73C	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248				86	0	0	44	18	29.0323
DAXX	0	genome.wustl.edu	37	6	33287900	33287900	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	33287900	33287900	C	T	SNP	DAXX	ENST00000266000	human	ensembl	74_37	-1	known	silent	c.1353	p.E451	0.044	pfam_Daxx	pfam_Daxx	-	no_errors	DAXX	HGNC	ENSG00000204209				62	0	0	38	11	22.449
SYNGAP1	0	genome.wustl.edu	37	6	33391326	33391326	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	33391326	33391326	G	A	SNP	SYNGAP1	ENST00000418600	human	ensembl	74_37	+1	known	missense	c.140	p.R47Q	1.000	smart_Pleckstrin_homology	pfam_DUF3498,pfam_RasGAP,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	SYNGAP1	HGNC	ENSG00000197283				175	0	0	106	29	21.4815
UHRF1BP1	0	genome.wustl.edu	37	6	34824084	34824084	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	34824084	34824084	C	T	SNP	UHRF1BP1	ENST00000192788	human	ensembl	74_37	+1	known	silent	c.1189	p.L397	1.000	NULL	NULL	-	no_errors	UHRF1BP1	HGNC	ENSG00000065060				226	0	0	181	13	6.70103
FGD2	0	genome.wustl.edu	37	6	36995778	36995778	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	36995778	36995778	C	T	SNP	FGD2	ENST00000274963	human	ensembl	74_37	+1	known	missense	c.1807	p.P603S	0.644	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Znf_FYVE,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD2	HGNC	ENSG00000146192				77	0	0	36	11	23.4043
CUL7	0	genome.wustl.edu	37	6	43019075	43019075	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	43019075	43019075	C	A	SNP	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	missense	c.1116	p.E372D	0.033	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090				90	0	0	49	20	28.9855
CUL9	0	genome.wustl.edu	37	6	43152294	43152294	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	43152294	43152294	G	A	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	silent	c.246	p.E82	0.915	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659				190	0	0	128	23	15.2318
TJAP1	0	genome.wustl.edu	37	6	43472983	43472983	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	43472983	43472983	G	A	SNP	TJAP1	ENST00000372445	human	ensembl	74_37	+1	known	missense	c.1064	p.R355H	1.000	NULL	NULL	-	no_errors	TJAP1	HGNC	ENSG00000137221				105	0	0	61	23	27.381
POLH	0	genome.wustl.edu	37	6	43565480	43565480	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	43565480	43565480	A	T	SNP	POLH	ENST00000372236	human	ensembl	74_37	+1	known	missense	c.538	p.I180F	0.000	pfam_DNA_repair_prot_UmuC-like,pirsf_DNA_pol_eta,pfscan_DNA_repair_prot_UmuC-like_N	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,superfamily_DNA_pol_Y-fam_little_finger,pirsf_DNA_pol_eta,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	POLH	HGNC	ENSG00000170734				101	0	0	69	19	21.5909
TDRD6	0	genome.wustl.edu	37	6	46658575	46658575	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	46658575	46658575	C	T	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	nonsense	c.2710	p.Q904*	0.016	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113				138	0	0	80	21	20.7921
RHAG	0	genome.wustl.edu	37	6	49574918	49574918	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	49574918	49574918	C	A	SNP	RHAG	ENST00000371175	human	ensembl	74_37	-1	known	missense	c.1083	p.Q361H	1.000	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHAG	HGNC	ENSG00000112077				45	0	0	34	4	10.5263
TFAP2B	0	genome.wustl.edu	37	6	50807909	50807909	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	50807909	50807909	C	T	SNP	TFAP2B	ENST00000263046	human	ensembl	74_37	+1	known	silent	c.1008	p.C336	0.493	pfam_TF_AP2_C	pfam_TF_AP2_C,prints_TF_AP2_beta,prints_TF_AP2_C	-	no_errors	TFAP2B	HGNC	ENSG00000008196				237	0	0	156	30	16.129
EFHC1	0	genome.wustl.edu	37	6	52329708	52329708	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	52329708	52329708	G	A	SNP	EFHC1	ENST00000371068	human	ensembl	74_37	+1	known	missense	c.932	p.C311Y	1.000	smart_Uncharacterised_DM10	pfam_DUF1126,smart_Uncharacterised_DM10,pfscan_EF_hand_dom	-	no_errors	EFHC1	HGNC	ENSG00000096093				65	0	0	49	7	12.5
BAI3	0	genome.wustl.edu	37	6	69666043	69666043	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	69666043	69666043	G	T	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.1323	p.W441C	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				52	0	0	42	3	6.66667
KCNQ5	0	genome.wustl.edu	37	6	73843172	73843172	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	73843172	73843172	C	T	SNP	KCNQ5	ENST00000402622	human	ensembl	74_37	+1	known	missense	c.1306	p.R436C	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ5	HGNC	ENSG00000185760				88	0	0	77	16	17.2043
DSP	0	genome.wustl.edu	37	6	7565702	7565702	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	7565702	7565702	C	T	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	silent	c.888	p.Y296	0.983	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				101	0	0	67	19	22.093
DSP	0	genome.wustl.edu	37	6	7569492	7569492	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	7569492	7569492	C	T	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.1493	p.P498L	1.000	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				147	0	0	73	33	31.1321
COL12A1	0	genome.wustl.edu	37	6	75812406	75812406	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	75812406	75812406	C	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	silent	c.8322	p.G2774	0.999	pfam_Collagen	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				59	0	0	42	11	20.7547
COL12A1	0	genome.wustl.edu	37	6	75828810	75828810	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	75828810	75828810	C	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.7303	p.G2435S	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				106	0	0	84	17	16.8317
COL12A1	0	genome.wustl.edu	37	6	75841699	75841699	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	75841699	75841699	C	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.5894	p.R1965H	0.878	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				89	0	0	54	22	28.9474
FILIP1	0	genome.wustl.edu	37	6	76024548	76024548	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	76024548	76024548	T	C	SNP	FILIP1	ENST00000237172	human	ensembl	74_37	-1	known	missense	c.1000	p.K334E	1.000	NULL	pfam_Cortactin-binding_p2_N,prints_Tropomyosin	-	no_errors	FILIP1	HGNC	ENSG00000118407				169	0	0	104	19	15.4472
HTR1B	0	genome.wustl.edu	37	6	78172722	78172722	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	78172722	78172722	G	A	SNP	HTR1B	ENST00000369947	human	ensembl	74_37	-1	known	silent	c.399	p.C133	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT1B_rcpt,prints_5HT_rcpt,prints_ADR_fam	-	no_errors	HTR1B	HGNC	ENSG00000135312				104	0	0	90	6	6.25
IRAK1BP1	0	genome.wustl.edu	37	6	79607819	79607819	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	79607819	79607819	G	A	SNP	IRAK1BP1	ENST00000369940	human	ensembl	74_37	+1	known	missense	c.551	p.R184H	0.967	pfam_DUF541	pfam_DUF541	-	no_errors	IRAK1BP1	HGNC	ENSG00000146243				106	0	0	64	6	8.57143
PRSS35	0	genome.wustl.edu	37	6	84233542	84233542	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	84233542	84233542	G	A	SNP	PRSS35	ENST00000369700	human	ensembl	74_37	+1	known	missense	c.382	p.D128N	1.000	superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom	-	no_errors	PRSS35	HGNC	ENSG00000146250				138	0	0	113	7	5.83333
TBX18	0	genome.wustl.edu	37	6	85446891	85446891	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	85446891	85446891	C	T	SNP	TBX18	ENST00000369663	human	ensembl	74_37	-1	known	missense	c.1336	p.G446S	0.844	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	TBX18	HGNC	ENSG00000112837				121	0	0	89	6	6.31579
MAP3K7	0	genome.wustl.edu	37	6	91254334	91254334	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	91254334	91254334	G	A	SNP	MAP3K7	ENST00000369329	human	ensembl	74_37	-1	known	missense	c.1228	p.R410W	1.000	pirsf_MAPKKK7	pirsf_MAPKKK7,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K7	HGNC	ENSG00000135341				91	0	0	61	11	15.2778
MANEA	0	genome.wustl.edu	37	6	96034845	96034845	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	96034845	96034845	G	A	SNP	MANEA	ENST00000358812	human	ensembl	74_37	+1	known	missense	c.530	p.R177H	0.263	superfamily_Glycoside_hydrolase_SF	superfamily_Glycoside_hydrolase_SF	-	no_errors	MANEA	HGNC	ENSG00000172469				107	0	0	87	6	6.45161
SRRT	0	genome.wustl.edu	37	7	100482596	100482596	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	100482596	100482596	G	A	SNP	SRRT	ENST00000388793	human	ensembl	74_37	+1	known	missense	c.1094	p.G365D	1.000	NULL	pfam_Arsenite-R_2,pfam_DUF3546	-	no_errors	SRRT	HGNC	ENSG00000087087				361	0	0	245	36	12.8114
MUC17	0	genome.wustl.edu	37	7	100674455	100674455	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	100674455	100674455	A	G	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.137	p.D46G	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				192	0	0	136	21	13.3758
RELN	0	genome.wustl.edu	37	7	103143664	103143664	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	103143664	103143664	C	T	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.8288	p.C2763Y	1.000	superfamily_Sialidases	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				73	0	0	67	18	21.1765
LHFPL3	0	genome.wustl.edu	37	7	103969413	103969413	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	103969413	103969413	C	T	SNP	LHFPL3	ENST00000535008	human	ensembl	74_37	+1	known	silent	c.186	p.G62	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL3	HGNC	ENSG00000187416				94	0	0	60	14	18.9189
PIK3CG	0	genome.wustl.edu	37	7	106508673	106508673	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	106508673	106508673	G	A	SNP	PIK3CG	ENST00000359195	human	ensembl	74_37	+1	known	missense	c.667	p.V223I	0.227	pfam_PI3K_Ras-bd_dom,smart_PI3K_Ras-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CG	HGNC	ENSG00000105851				173	0	0	118	29	19.7279
LAMB1	0	genome.wustl.edu	37	7	107580735	107580735	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	107580735	107580735	C	T	SNP	LAMB1	ENST00000222399	human	ensembl	74_37	-1	known	missense	c.3460	p.V1154I	0.681	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Prefoldin,superfamily_t-SNARE,superfamily_P-loop_NTPase,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB1	HGNC	ENSG00000091136				92	0	0	57	19	25
NRCAM	0	genome.wustl.edu	37	7	107824976	107824976	+	Silent	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	107824976	107824976	T	G	SNP	NRCAM	ENST00000379028	human	ensembl	74_37	-1	known	silent	c.2118	p.T706	0.983	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NRCAM	HGNC	ENSG00000091129				66	0	0	41	8	16.3265
WNT16	0	genome.wustl.edu	37	7	120971947	120971947	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	120971947	120971947	G	A	SNP	WNT16	ENST00000222462	human	ensembl	74_37	+1	known	missense	c.562	p.G188R	0.189	pfam_Wnt,smart_Wnt,prints_Wnt16	pfam_Wnt,smart_Wnt,prints_Wnt16,prints_Wnt	-	no_errors	WNT16	HGNC	ENSG00000002745				104	0	0	76	5	6.17284
GPR37	0	genome.wustl.edu	37	7	124404756	124404756	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	124404756	124404756	G	A	SNP	GPR37	ENST00000303921	human	ensembl	74_37	-1	known	missense	c.275	p.P92L	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR37_orph,prints_GPCR_Rhodpsn	-	no_errors	GPR37	HGNC	ENSG00000170775				48	0	0	31	4	11.4286
SND1	0	genome.wustl.edu	37	7	127714599	127714599	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	127714599	127714599	G	A	SNP	SND1	ENST00000354725	human	ensembl	74_37	+1	known	missense	c.1825	p.G609S	1.000	pfam_Staphylococal_nuclease_OB-fold,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Staphylococal_nuclease_OB-fold	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157				63	0	0	34	9	20.9302
FLNC	0	genome.wustl.edu	37	7	128482407	128482407	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	128482407	128482407	C	T	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	silent	c.2244	p.N748	0.988	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591				87	0	0	68	4	5.55556
FLNC	0	genome.wustl.edu	37	7	128494150	128494150	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	128494150	128494150	C	T	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	missense	c.6607	p.R2203C	1.000	NULL	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591				48	0	0	37	4	9.7561
PLXNA4	0	genome.wustl.edu	37	7	131853208	131853208	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	131853208	131853208	G	A	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	missense	c.4141	p.R1381C	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866				71	0	0	51	16	23.8806
SLC13A4	0	genome.wustl.edu	37	7	135366416	135366416	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	135366416	135366416	T	C	SNP	SLC13A4	ENST00000354042	human	ensembl	74_37	-1	known	silent	c.1776	p.G592	0.988	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom,pfam_DctM	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom,pfam_DctM	-	no_errors	SLC13A4	HGNC	ENSG00000164707				74	0	0	68	15	18.0723
CHRM2	0	genome.wustl.edu	37	7	136700605	136700605	+	Silent	SNP	C	C	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	136700605	136700605	C	G	SNP	CHRM2	ENST00000320658	human	ensembl	74_37	+1	known	silent	c.993	p.T331	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M2_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M2_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM2	HGNC	ENSG00000181072				117	0	0	74	19	20.4301
KIAA1549	0	genome.wustl.edu	37	7	138601880	138601880	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	138601880	138601880	G	A	SNP	KIAA1549	ENST00000422774	human	ensembl	74_37	-1	known	missense	c.2492	p.A831V	0.001	NULL	NULL	-	no_errors	KIAA1549	HGNC	ENSG00000122778				68	0	0	25	7	21.875
TAS2R38	0	genome.wustl.edu	37	7	141673410	141673410	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	141673410	141673410	G	T	SNP	TAS2R38	ENST00000547270	human	ensembl	74_37	-1	known	missense	c.80	p.A27E	0.008	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R38	HGNC	ENSG00000257138				139	1	0.714286	73	20	21.5054
TRPV6	0	genome.wustl.edu	37	7	142575711	142575711	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	142575711	142575711	T	C	SNP	TRPV6	ENST00000359396	human	ensembl	74_37	-1	known	missense	c.197	p.K66R	0.870	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6,prints_TRPV6_channel,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV6	HGNC	ENSG00000165125				120	0	0	63	12	16
ZYX	0	genome.wustl.edu	37	7	143085633	143085633	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	143085633	143085633	G	A	SNP	ZYX	ENST00000322764	human	ensembl	74_37	+1	known	missense	c.1196	p.R399H	0.072	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	ZYX	HGNC	ENSG00000159840				133	0	0	92	14	13.2075
CNTNAP2	0	genome.wustl.edu	37	7	147815286	147815286	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	147815286	147815286	C	T	SNP	CNTNAP2	ENST00000361727	human	ensembl	74_37	+1	known	silent	c.2460	p.S820	0.970	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP2	HGNC	ENSG00000174469				117	0	0	97	11	10.1852
C7orf33	0	genome.wustl.edu	37	7	148311382	148311382	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	148311382	148311382	C	T	SNP	C7orf33	ENST00000307003	human	ensembl	74_37	+1	known	silent	c.453	p.Y151	0.002	NULL	NULL	-	no_errors	C7orf33	HGNC	ENSG00000170279				93	0	0	80	8	9.09091
CUL1	0	genome.wustl.edu	37	7	148489851	148489851	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	148489851	148489851	T	C	SNP	CUL1	ENST00000325222	human	ensembl	74_37	+1	known	missense	c.1840	p.Y614H	1.000	pfam_Cullin_N,superfamily_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL1	HGNC	ENSG00000055130				46	0	0	28	3	9.67742
PDIA4	0	genome.wustl.edu	37	7	148709400	148709400	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	148709400	148709400	G	A	SNP	PDIA4	ENST00000286091	human	ensembl	74_37	-1	known	missense	c.667	p.L223F	1.000	pirsf_Protein_diS-isomerase_A4,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	pirsf_Protein_diS-isomerase_A4,pfam_Thioredoxin_domain,pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,prints_Calsequestrin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	PDIA4	HGNC	ENSG00000155660				80	0	0	66	8	10.8108
SSPO	0	genome.wustl.edu	37	7	149515750	149515750	+	RNA	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	149515750	149515750	G	C	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				45	0	0	34	5	12.8205
DPP6	0	genome.wustl.edu	37	7	154585835	154585835	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	154585835	154585835	G	A	SNP	DPP6	ENST00000377770	human	ensembl	74_37	+1	known	missense	c.1183	p.A395T	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_PD40	-	no_errors	DPP6	HGNC	ENSG00000130226				39	0	0	35	9	20.4545
NCAPG2	0	genome.wustl.edu	37	7	158472698	158472698	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	158472698	158472698	G	A	SNP	NCAPG2	ENST00000409339	human	ensembl	74_37	-1	known	missense	c.1100	p.A367V	0.000	superfamily_ARM-type_fold	pfam_Condensin2_G2,superfamily_ARM-type_fold	-	no_errors	NCAPG2	HGNC	ENSG00000146918				127	0	0	73	37	33.6364
ESYT2	0	genome.wustl.edu	37	7	158534291	158534291	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	158534291	158534291	C	T	SNP	ESYT2	ENST00000251527	human	ensembl	74_37	-1	known	silent	c.2172	p.P724	0.999	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	ESYT2	HGNC	ENSG00000117868				92	0	0	60	9	13.0435
BRAT1	0	genome.wustl.edu	37	7	2578880	2578880	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	2578880	2578880	G	A	SNP	BRAT1	ENST00000340611	human	ensembl	74_37	-1	known	missense	c.1703	p.A568V	0.209	pfam_HEAT,superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	BRAT1	HGNC	ENSG00000106009				64	0	0	29	7	19.4444
CARD11	0	genome.wustl.edu	37	7	2959215	2959215	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	2959215	2959215	G	A	SNP	CARD11	ENST00000396946	human	ensembl	74_37	-1	known	silent	c.2301	p.D767	0.007	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD	-	no_errors	CARD11	HGNC	ENSG00000198286				37	0	0	19	7	26.9231
GHRHR	0	genome.wustl.edu	37	7	31013693	31013693	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	31013693	31013693	C	A	SNP	GHRHR	ENST00000326139	human	ensembl	74_37	+1	known	missense	c.691	p.L231M	0.960	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_GHRH_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_VIP_rcpt_1	-	no_errors	GHRHR	HGNC	ENSG00000106128				155	0	0	107	15	12.2951
PDE1C	0	genome.wustl.edu	37	7	31887708	31887708	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	31887708	31887708	G	A	SNP	PDE1C	ENST00000321453	human	ensembl	74_37	-1	known	missense	c.854	p.S285F	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1C	HGNC	ENSG00000154678				105	0	0	76	5	6.17284
FKBP9	0	genome.wustl.edu	37	7	33014897	33014897	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	33014897	33014897	G	A	SNP	FKBP9	ENST00000538336	human	ensembl	74_37	+1	known	silent	c.630	p.P210	0.001	NULL	pfam_PPIase_FKBP_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP9	HGNC	ENSG00000122642				104	0	0	61	15	19.7368
DPY19L2P1	0	genome.wustl.edu	37	7	35131548	35131548	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	35131548	35131548	G	A	SNP	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.985	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212				78	0	0	57	5	8.06452
GLI3	0	genome.wustl.edu	37	7	42005111	42005111	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	42005111	42005111	T	C	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.3560	p.Q1187R	0.834	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				222	0	0	159	11	6.47059
GLI3	0	genome.wustl.edu	37	7	42005485	42005485	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	42005485	42005485	C	T	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	silent	c.3186	p.S1062	0.024	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				119	0	0	59	11	15.7143
CAMK2B	0	genome.wustl.edu	37	7	44302628	44302628	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	44302628	44302628	G	A	SNP	CAMK2B	ENST00000395749	human	ensembl	74_37	-1	known	missense	c.196	p.R66C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2B	HGNC	ENSG00000058404				104	0	0	62	16	20.5128
AP5Z1	0	genome.wustl.edu	37	7	4821204	4821204	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	4821204	4821204	A	G	SNP	AP5Z1	ENST00000348624	human	ensembl	74_37	+1	known	missense	c.185	p.E62G	0.948	NULL	NULL	-	no_errors	AP5Z1	HGNC	ENSG00000242802				50	0	0	26	8	23.5294
AP5Z1	0	genome.wustl.edu	37	7	4830319	4830319	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	4830319	4830319	G	A	SNP	AP5Z1	ENST00000348624	human	ensembl	74_37	+1	known	missense	c.1954	p.E652K	1.000	NULL	NULL	-	no_errors	AP5Z1	HGNC	ENSG00000242802				28	0	0	22	5	18.5185
IKZF1	0	genome.wustl.edu	37	7	50367275	50367275	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	50367275	50367275	G	A	SNP	IKZF1	ENST00000331340	human	ensembl	74_37	+1	known	missense	c.82	p.D28N	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF1	HGNC	ENSG00000185811				30	0	0	25	6	19.3548
RBAK-RBAKDN	0	genome.wustl.edu	37	7	5112677	5112677	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	5112677	5112677	G	A	SNP	RBAK-RBAKDN	ENST00000407184	human	ensembl	74_37	+1	known	missense	c.560	p.R187H	0.073	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	RBAK-RBAKDN	HGNC	ENSG00000272968				77	0	0	42	7	14.2857
WIPI2	0	genome.wustl.edu	37	7	5257644	5257644	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	5257644	5257644	A	C	SNP	WIPI2	ENST00000288828	human	ensembl	74_37	+1	known	missense	c.668	p.K223T	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WIPI2	HGNC	ENSG00000157954				159	0	0	118	18	13.2353
TNRC18	0	genome.wustl.edu	37	7	5415855	5415855	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	5415855	5415855	G	A	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	missense	c.2609	p.A870V	0.999	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095				12	0	0	8	3	27.2727
SNORA15	0	genome.wustl.edu	37	7	56128220	56128220	+	RNA	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	56128220	56128220	G	T	SNP	SNORA15	ENST00000384439	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	SNORA15	HGNC	ENSG00000207168				51	0	0	47	5	9.61538
GTF2IRD1P1	0	genome.wustl.edu	37	7	66297996	66297996	+	RNA	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	66297996	66297996	C	T	SNP	GTF2IRD1P1	ENST00000457166	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.791	-	-	-	no_errors	GTF2IRD1P1	HGNC	ENSG00000230583				74	0	0	40	19	32.2034
NCF1	0	genome.wustl.edu	37	7	74197385	74197385	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	74197385	74197385	C	T	SNP	NCF1	ENST00000289473	human	ensembl	74_37	+1	known	silent	c.555	p.V185	0.812	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_domain,pfam_NADPH_oxidase_p47Phox_C,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain,prints_P47PHOX	-	no_errors	NCF1	HGNC	ENSG00000158517				104	0	0	58	14	19.4444
WBSCR16	0	genome.wustl.edu	37	7	74486480	74486480	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	74486480	74486480	C	T	SNP	WBSCR16	ENST00000329959	human	ensembl	74_37	-1	known	missense	c.428	p.G143E	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	WBSCR16	HGNC	ENSG00000174374				109	0	0	100	7	6.54206
HIP1	0	genome.wustl.edu	37	7	75167506	75167506	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	75167506	75167506	G	A	SNP	HIP1	ENST00000336926	human	ensembl	74_37	-1	known	missense	c.3101	p.T1034I	0.151	NULL	pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom	-	no_errors	HIP1	HGNC	ENSG00000127946				175	0	0	133	21	13.6364
RSBN1L	0	genome.wustl.edu	37	7	77325880	77325880	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	77325880	77325880	T	G	SNP	RSBN1L	ENST00000334955	human	ensembl	74_37	+1	known	missense	c.94	p.S32A	0.001	NULL	NULL	-	no_errors	RSBN1L	HGNC	ENSG00000187257				139	0	0	102	17	14.2857
SEMA3C	0	genome.wustl.edu	37	7	80430101	80430101	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	80430101	80430101	G	T	SNP	SEMA3C	ENST00000544525	human	ensembl	74_37	-1	known	missense	c.1012	p.L338I	0.996	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Ig_I-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3C	HGNC	ENSG00000075223				114	0	0	79	6	7.05882
DMTF1	0	genome.wustl.edu	37	7	86824094	86824094	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	86824094	86824094	C	T	SNP	DMTF1	ENST00000331242	human	ensembl	74_37	+1	known	missense	c.2123	p.A708V	0.974	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	DMTF1	HGNC	ENSG00000135164				76	0	0	44	15	25.4237
ADAM22	0	genome.wustl.edu	37	7	87762257	87762257	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	87762257	87762257	C	T	SNP	ADAM22	ENST00000265727	human	ensembl	74_37	+1	known	silent	c.1068	p.G356	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM22	HGNC	ENSG00000008277				133	0	0	107	9	7.75862
CYP51A1	0	genome.wustl.edu	37	7	91763674	91763674	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	91763674	91763674	G	A	SNP	CYP51A1	ENST00000003100	human	ensembl	74_37	-1	known	missense	c.5	p.A2V	0.005	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP51A1	HGNC	ENSG00000001630				27	0	0	25	3	10.7143
TFPI2	0	genome.wustl.edu	37	7	93519522	93519522	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	93519522	93519522	G	A	SNP	TFPI2	ENST00000222543	human	ensembl	74_37	-1	known	silent	c.198	p.Y66	0.653	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	TFPI2	HGNC	ENSG00000105825				90	0	0	91	5	5.20833
DLX5	0	genome.wustl.edu	37	7	96651532	96651532	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	96651532	96651532	C	T	SNP	DLX5	ENST00000222598	human	ensembl	74_37	-1	known	missense	c.505	p.E169K	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	pfam_Distal-less_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX5	HGNC	ENSG00000105880				191	0	0	127	16	11.1888
NPTX2	0	genome.wustl.edu	37	7	98249051	98249051	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	98249051	98249051	C	T	SNP	NPTX2	ENST00000265634	human	ensembl	74_37	+1	known	missense	c.523	p.R175C	0.682	NULL	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTX2	HGNC	ENSG00000106236				84	0	0	59	11	15.7143
TRRAP	0	genome.wustl.edu	37	7	98519385	98519385	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	98519385	98519385	C	T	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	missense	c.2632	p.R878C	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367				101	0	0	70	13	15.6627
ZSCAN25	0	genome.wustl.edu	37	7	99217366	99217366	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	99217366	99217366	G	A	SNP	ZSCAN25	ENST00000334715	human	ensembl	74_37	+1	known	missense	c.137	p.R46Q	1.000	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN25	HGNC	ENSG00000197037				274	0	0	169	50	22.8311
ZSCAN21	0	genome.wustl.edu	37	7	99661618	99661618	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	99661618	99661618	C	A	SNP	ZSCAN21	ENST00000292450	human	ensembl	74_37	+1	known	missense	c.800	p.P267H	0.004	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN21	HGNC	ENSG00000166529				75	0	0	47	5	9.61538
SNX31	0	genome.wustl.edu	37	8	101648123	101648123	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	101648123	101648123	A	G	SNP	SNX31	ENST00000311812	human	ensembl	74_37	-1	known	splice_site	c.256+2	e3+2	1.000	-	-	-	no_errors	SNX31	HGNC	ENSG00000174226				52	0	0	45	10	18.1818
ZFPM2	0	genome.wustl.edu	37	8	106811058	106811058	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	106811058	106811058	G	A	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	silent	c.846	p.P282	0.620	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946				136	0	0	113	7	5.83333
RAD21	0	genome.wustl.edu	37	8	117861199	117861199	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	117861199	117861199	G	A	SNP	RAD21	ENST00000297338	human	ensembl	74_37	-1	known	missense	c.1690	p.L564F	1.000	pfam_ScpA	pfam_Rad21_Rec8_N,pfam_Rad21/Rec8_C_eu,pfam_ScpA	-	no_errors	RAD21	HGNC	ENSG00000164754				153	1	0.649351	138	26	15.8537
ANXA13	0	genome.wustl.edu	37	8	124748069	124748069	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	124748069	124748069	C	A	SNP	ANXA13	ENST00000262219	human	ensembl	74_37	-1	known	missense	c.64	p.D22Y	0.148	NULL	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinXIII	-	no_errors	ANXA13	HGNC	ENSG00000104537				134	0	0	126	7	5.26316
MTSS1	0	genome.wustl.edu	37	8	125565703	125565703	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	125565703	125565703	G	A	SNP	MTSS1	ENST00000518547	human	ensembl	74_37	-1	known	missense	c.1798	p.R600C	1.000	NULL	pfam_IRSp53/MIM_homology_IMD,pfscan_WH2_dom	-	no_errors	MTSS1	HGNC	ENSG00000170873				63	0	0	37	8	17.7778
POU5F1B	0	genome.wustl.edu	37	8	128428447	128428447	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	128428447	128428447	G	A	SNP	POU5F1B	ENST00000391675	human	ensembl	74_37	+1	known	silent	c.336	p.P112	0.005	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU5F1B	HGNC	ENSG00000212993				42	0	0	35	9	20.4545
ADCY8	0	genome.wustl.edu	37	8	131916225	131916225	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	131916225	131916225	G	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	silent	c.1704	p.G568	0.078	pfam_A/G_cyclase,superfamily_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				228	0	0	146	33	18.4358
ADCY8	0	genome.wustl.edu	37	8	132002688	132002688	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	132002688	132002688	C	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.1061	p.R354L	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				243	0	0	192	13	6.34146
PHF20L1	0	genome.wustl.edu	37	8	133854799	133854799	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	133854799	133854799	C	T	SNP	PHF20L1	ENST00000220847	human	ensembl	74_37	+1	known	silent	c.588	p.S196	0.631	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD	-	no_errors	PHF20L1	HGNC	ENSG00000129292				53	0	0	47	8	14.5455
ZFAT	0	genome.wustl.edu	37	8	135614475	135614475	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	135614475	135614475	T	A	SNP	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	missense	c.1487	p.Q496L	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827				65	0	0	36	3	7.69231
TRAPPC9	0	genome.wustl.edu	37	8	141461466	141461466	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	141461466	141461466	C	T	SNP	TRAPPC9	ENST00000389328	human	ensembl	74_37	-1	known	missense	c.301	p.V101I	0.987	NULL	pfam_TRAPP_II_complex_Trs120	-	no_errors	TRAPPC9	HGNC	ENSG00000167632				62	0	0	45	13	22.4138
AGO2	0	genome.wustl.edu	37	8	141561427	141561427	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	141561427	141561427	G	A	SNP	AGO2	ENST00000220592	human	ensembl	74_37	-1	known	missense	c.1378	p.R460C	1.000	NULL	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO2	HGNC	ENSG00000123908				184	0	0	152	10	6.17284
SLC45A4	0	genome.wustl.edu	37	8	142221613	142221613	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	142221613	142221613	G	T	SNP	SLC45A4	ENST00000024061	human	ensembl	74_37	-1	known	silent	c.2325	p.P775	0.000	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				228	0	0	151	25	14.2045
LYNX1	0	genome.wustl.edu	37	8	143846082	143846082	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	143846082	143846082	C	A	SNP	LYNX1	ENST00000335822	human	ensembl	74_37	-1	known	missense	c.337	p.G113C	0.246	pfam_LY6_UPAR	pfam_LY6_UPAR	-	no_errors	LYNX1	HGNC	ENSG00000180155				134	0	0	100	12	10.7143
GLI4	0	genome.wustl.edu	37	8	144351661	144351661	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	144351661	144351661	C	A	SNP	GLI4	ENST00000340042	human	ensembl	74_37	+1	known	missense	c.95	p.P32H	0.009	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI4	HGNC	ENSG00000250571				258	0	0	209	28	11.8143
TSTA3	0	genome.wustl.edu	37	8	144695702	144695702	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	144695702	144695702	C	A	SNP	TSTA3	ENST00000425753	human	ensembl	74_37	-1	known	nonsense	c.802	p.E268*	0.996	NULL	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct	-	no_errors	TSTA3	HGNC	ENSG00000104522				32	0	0	22	5	18.5185
ZNF707	0	genome.wustl.edu	37	8	144776725	144776725	+	RNA	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	144776725	144776725	C	T	SNP	ZNF707	ENST00000527561	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF707	HGNC	ENSG00000181135				28	0	0	23	2	8
MICU3	0	genome.wustl.edu	37	8	16884802	16884802	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	16884802	16884802	G	A	SNP	MICU3	ENST00000318063	human	ensembl	74_37	+1	known	missense	c.14	p.R5Q	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MICU3	HGNC	ENSG00000155970				53	0	0	47	4	7.84314
MICU3	0	genome.wustl.edu	37	8	16884830	16884830	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	16884830	16884830	G	A	SNP	MICU3	ENST00000318063	human	ensembl	74_37	+1	known	silent	c.42	p.V14	0.001	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MICU3	HGNC	ENSG00000155970				47	0	0	35	8	18.6047
ARHGEF10	0	genome.wustl.edu	37	8	1842672	1842672	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	1842672	1842672	C	T	SNP	ARHGEF10	ENST00000398564	human	ensembl	74_37	+1	known	silent	c.1449	p.I483	0.014	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10	HGNC	ENSG00000104728				82	0	0	66	6	8.33333
PSD3	0	genome.wustl.edu	37	8	18729874	18729874	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	18729874	18729874	T	C	SNP	PSD3	ENST00000440756	human	ensembl	74_37	-1	known	missense	c.500	p.Q167R	0.486	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	PSD3	HGNC	ENSG00000156011				135	0	0	111	7	5.9322
INTS10	0	genome.wustl.edu	37	8	19680854	19680854	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	19680854	19680854	G	A	SNP	INTS10	ENST00000397977	human	ensembl	74_37	+1	known	missense	c.566	p.R189Q	1.000	NULL	NULL	-	no_errors	INTS10	HGNC	ENSG00000104613				122	0	0	105	15	12.5
NPM2	0	genome.wustl.edu	37	8	21892019	21892019	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	21892019	21892019	A	G	SNP	NPM2	ENST00000397940	human	ensembl	74_37	+1	known	splice_site	c.532-2	e6-2	1.000	-	-	-	no_errors	NPM2	HGNC	ENSG00000158806				191	0	0	128	7	5.18519
PPP3CC	0	genome.wustl.edu	37	8	22368626	22368626	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	22368626	22368626	A	G	SNP	PPP3CC	ENST00000240139	human	ensembl	74_37	+1	known	missense	c.512	p.Y171C	1.000	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP3CC	HGNC	ENSG00000120910				162	0	0	97	6	5.82524
NEFM	0	genome.wustl.edu	37	8	24771944	24771944	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	24771944	24771944	C	T	SNP	NEFM	ENST00000221166	human	ensembl	74_37	+1	known	missense	c.638	p.A213V	0.998	pfam_IF,prints_Keratin_I	pfam_IF,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	NEFM	HGNC	ENSG00000104722				54	0	0	44	6	12
PNMA2	0	genome.wustl.edu	37	8	26366267	26366267	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	26366267	26366267	G	A	SNP	PNMA2	ENST00000522362	human	ensembl	74_37	-1	known	missense	c.5	p.A2V	0.946	NULL	pfam_Retrotrans_gag_dom	-	no_errors	PNMA2	HGNC	ENSG00000240694				202	0	0	179	17	8.67347
EXTL3	0	genome.wustl.edu	37	8	28575348	28575348	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	28575348	28575348	G	A	SNP	EXTL3	ENST00000220562	human	ensembl	74_37	+1	known	missense	c.1772	p.R591H	1.000	NULL	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXTL3	HGNC	ENSG00000012232				102	0	0	58	18	23.6842
KIF13B	0	genome.wustl.edu	37	8	28974382	28974382	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	28974382	28974382	C	T	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	missense	c.3803	p.R1268H	1.000	pfam_Kinesin-like	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892				90	0	0	81	13	13.8298
KIF13B	0	genome.wustl.edu	37	8	29006250	29006250	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	29006250	29006250	G	A	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	nonsense	c.1657	p.R553*	0.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892				127	0	0	107	27	20.1493
CSMD1	0	genome.wustl.edu	37	8	3057289	3057289	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	3057289	3057289	C	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.5144	p.R1715Q	0.867	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				13	0	0	7	4	36.3636
FUT10	0	genome.wustl.edu	37	8	33310939	33310939	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	33310939	33310939	C	T	SNP	FUT10	ENST00000327671	human	ensembl	74_37	-1	known	silent	c.171	p.T57	0.000	pfam_Glyco_trans_10,pirsf_Alpha-1_3-FUT_met	pfam_Glyco_trans_10,pirsf_Alpha-1_3-FUT_met	-	no_errors	FUT10	HGNC	ENSG00000172728				115	0	0	79	6	7.05882
PROSC	0	genome.wustl.edu	37	8	37633536	37633536	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	37633536	37633536	T	C	SNP	PROSC	ENST00000328195	human	ensembl	74_37	+1	known	splice_site	c.696+2	e7+2	1.000	-	-	-	no_errors	PROSC	HGNC	ENSG00000147471				143	0	0	106	25	19.084
WHSC1L1	0	genome.wustl.edu	37	8	38205365	38205365	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	38205365	38205365	T	C	SNP	WHSC1L1	ENST00000317025	human	ensembl	74_37	-1	known	missense	c.325	p.T109A	1.000	NULL	pfam_PWWP_dom,pfam_SET_dom,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	WHSC1L1	HGNC	ENSG00000147548				162	0	0	151	11	6.79012
MCM4	0	genome.wustl.edu	37	8	48878898	48878898	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	48878898	48878898	C	T	SNP	MCM4	ENST00000262105	human	ensembl	74_37	+1	known	silent	c.984	p.C328	0.013	superfamily_NA-bd_OB-fold,smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM4	HGNC	ENSG00000104738				57	0	0	50	10	16.6667
SNAI2	0	genome.wustl.edu	37	8	49832848	49832848	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	49832848	49832848	C	T	SNP	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	missense	c.232	p.G78R	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549				187	0	0	112	33	22.7586
SNTG1	0	genome.wustl.edu	37	8	51465608	51465608	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	51465608	51465608	A	G	SNP	SNTG1	ENST00000518864	human	ensembl	74_37	+1	known	splice_site	c.681-2	e10-2	1.000	-	-	-	no_errors	SNTG1	HGNC	ENSG00000147481				83	0	0	65	16	19.7531
RP1	0	genome.wustl.edu	37	8	55533898	55533898	+	Silent	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	55533898	55533898	G	C	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	silent	c.372	p.P124	0.672	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237				123	0	0	99	30	23.2558
RP1	0	genome.wustl.edu	37	8	55540617	55540617	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	55540617	55540617	A	G	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	missense	c.4175	p.N1392S	0.892	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237				97	0	0	58	8	12.1212
XKR4	0	genome.wustl.edu	37	8	56015703	56015703	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	56015703	56015703	G	A	SNP	XKR4	ENST00000327381	human	ensembl	74_37	+1	known	missense	c.655	p.A219T	1.000	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR4	HGNC	ENSG00000206579				72	0	0	51	14	21.5385
TMEM68	0	genome.wustl.edu	37	8	56675290	56675290	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	56675290	56675290	T	C	SNP	TMEM68	ENST00000434581	human	ensembl	74_37	-1	known	missense	c.229	p.K77E	1.000	NULL	pfam_Plipid/glycerol_acylTrfase	-	no_errors	TMEM68	HGNC	ENSG00000167904				156	0	0	117	13	10
CHD7	0	genome.wustl.edu	37	8	61654851	61654851	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	61654851	61654851	C	T	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	missense	c.860	p.P287L	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316				211	0	0	156	29	15.6757
ANGPT2	0	genome.wustl.edu	37	8	6371335	6371335	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	6371335	6371335	G	C	SNP	ANGPT2	ENST00000325203	human	ensembl	74_37	-1	known	missense	c.1063	p.L355V	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPT2	HGNC	ENSG00000091879				106	0	0	69	16	18.8235
MYBL1	0	genome.wustl.edu	37	8	67488263	67488263	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	67488263	67488263	T	C	SNP	MYBL1	ENST00000522677	human	ensembl	74_37	-1	known	silent	c.1449	p.T483	1.000	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697				45	0	0	28	7	20
MYBL1	0	genome.wustl.edu	37	8	67488564	67488564	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	67488564	67488564	G	T	SNP	MYBL1	ENST00000522677	human	ensembl	74_37	-1	known	missense	c.1148	p.A383D	1.000	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697				209	0	0	143	17	10.625
PREX2	0	genome.wustl.edu	37	8	68992720	68992720	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	68992720	68992720	G	A	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.1685	p.R562H	1.000	pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889				83	0	0	59	6	9.23077
CRISPLD1	0	genome.wustl.edu	37	8	75898439	75898439	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	75898439	75898439	C	T	SNP	CRISPLD1	ENST00000262207	human	ensembl	74_37	+1	known	nonsense	c.217	p.R73*	0.998	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1	pfam_LCCL,pfam_CAP_domain,superfamily_CAP_domain,superfamily_LCCL,smart_Allrgn_V5/Tpx1,smart_LCCL,pfscan_LCCL,prints_Allrgn_V5/Tpx1	-	no_errors	CRISPLD1	HGNC	ENSG00000121005				135	0	0	96	12	11.1111
FAM86B3P	0	genome.wustl.edu	37	8	8093365	8093365	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	8093365	8093365	G	A	SNP	FAM86B3P	ENST00000522601	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.879	-	-	-	no_errors	FAM86B3P	HGNC	ENSG00000173295				43	0	0	35	5	12.5
KIAA1429	0	genome.wustl.edu	37	8	95539493	95539493	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	95539493	95539493	C	T	SNP	KIAA1429	ENST00000297591	human	ensembl	74_37	-1	known	missense	c.979	p.A327T	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944				85	0	0	66	7	9.58904
CCNE2	0	genome.wustl.edu	37	8	95902778	95902778	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	95902778	95902778	G	T	SNP	CCNE2	ENST00000308108	human	ensembl	74_37	-1	known	missense	c.318	p.S106R	1.000	superfamily_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNE2	HGNC	ENSG00000175305				178	1	0.558659	146	17	10.4294
POP1	0	genome.wustl.edu	37	8	99146739	99146739	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	99146739	99146739	G	A	SNP	POP1	ENST00000349693	human	ensembl	74_37	+1	known	missense	c.863	p.R288H	0.929	NULL	pfam_RNase_P/MRP_POP1,pfam_POPLD	-	no_errors	POP1	HGNC	ENSG00000104356				121	0	0	83	23	21.6981
CCDC180	0	genome.wustl.edu	37	9	100057269	100057269	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	100057269	100057269	G	A	SNP	CCDC180	ENST00000357054	human	ensembl	74_37	+1	known	silent	c.393	p.S131	0.052	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816				55	0	0	33	9	21.4286
CCDC180	0	genome.wustl.edu	37	9	100105645	100105645	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	100105645	100105645	A	G	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	silent	c.2430	p.L810	0.000	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816				92	0	0	56	27	32.5301
ACTL7B	0	genome.wustl.edu	37	9	111617947	111617947	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	111617947	111617947	G	A	SNP	ACTL7B	ENST00000374667	human	ensembl	74_37	-1	known	silent	c.264	p.D88	0.001	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL7B	HGNC	ENSG00000148156				171	0	0	106	41	27.8912
SVEP1	0	genome.wustl.edu	37	9	113190032	113190032	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	113190032	113190032	C	A	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.5814	p.Q1938H	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124				117	0	0	61	30	32.967
PTGR1	0	genome.wustl.edu	37	9	114332454	114332454	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	114332454	114332454	G	A	SNP	PTGR1	ENST00000309195	human	ensembl	74_37	-1	known	missense	c.796	p.R266C	0.996	pfam_ADH_C,smart_PKS_ER,tigrfam_B4_12hDH	pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER,tigrfam_B4_12hDH	-	no_errors	PTGR1	HGNC	ENSG00000106853				49	0	0	35	10	22.2222
C9orf43	0	genome.wustl.edu	37	9	116187657	116187657	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	116187657	116187657	A	G	SNP	C9orf43	ENST00000288462	human	ensembl	74_37	+1	known	missense	c.899	p.Q300R	0.986	NULL	NULL	-	no_errors	C9orf43	HGNC	ENSG00000157653				121	0	0	69	5	6.75676
ZNF618	0	genome.wustl.edu	37	9	116812484	116812484	+	RNA	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	116812484	116812484	G	T	SNP	ZNF618	ENST00000470105	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.334	-	-	-	no_errors	ZNF618	HGNC	ENSG00000157657				83	0	0	46	10	17.8571
ASTN2	0	genome.wustl.edu	37	9	119413907	119413907	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	119413907	119413907	C	T	SNP	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	missense	c.2972	p.R991H	1.000	smart_MACPF	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219				145	0	0	83	10	10.7527
CDK5RAP2	0	genome.wustl.edu	37	9	123165314	123165314	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	123165314	123165314	C	T	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.5077	p.D1693N	0.965	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861				124	0	0	92	20	17.8571
MEGF9	0	genome.wustl.edu	37	9	123370165	123370165	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	123370165	123370165	C	T	SNP	MEGF9	ENST00000426959	human	ensembl	74_37	-1	known	missense	c.1322	p.G441D	1.000	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF9	HGNC	ENSG00000106780				229	0	0	174	60	25.641
NDUFA8	0	genome.wustl.edu	37	9	124906542	124906542	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	124906542	124906542	C	T	SNP	NDUFA8	ENST00000373768	human	ensembl	74_37	-1	known	missense	c.497	p.R166H	0.921	NULL	pfam_CHCH,pirsf_NADH_Ub_cplx-1_asu_su-8	-	no_errors	NDUFA8	HGNC	ENSG00000119421				78	0	0	76	7	8.43373
OR1Q1	0	genome.wustl.edu	37	9	125377119	125377119	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	125377119	125377119	T	C	SNP	OR1Q1	ENST00000297913	human	ensembl	74_37	+1	known	missense	c.103	p.Y35H	1.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1Q1	HGNC	ENSG00000165202				223	0	0	163	45	21.6346
RC3H2	0	genome.wustl.edu	37	9	125618021	125618021	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	125618021	125618021	G	A	SNP	RC3H2	ENST00000357244	human	ensembl	74_37	-1	known	missense	c.2591	p.A864V	1.000	NULL	pfam_Znf_CCCH,smart_Znf_RING,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	RC3H2	HGNC	ENSG00000056586				138	0	0	87	19	17.9245
RABGAP1	0	genome.wustl.edu	37	9	125758824	125758824	+	Silent	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	125758824	125758824	T	C	SNP	RABGAP1	ENST00000373647	human	ensembl	74_37	+1	known	silent	c.1041	p.F347	1.000	pfam_Kinesin-like	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454				69	0	0	61	8	11.5942
DENND1A	0	genome.wustl.edu	37	9	126319911	126319911	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	126319911	126319911	C	T	SNP	DENND1A	ENST00000394219	human	ensembl	74_37	-1	known	missense	c.835	p.A279T	1.000	pfam_dDENN_dom,smart_dDENN_dom,pfscan_dDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1A	HGNC	ENSG00000119522				64	0	0	36	6	14.2857
GARNL3	0	genome.wustl.edu	37	9	130111247	130111247	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	130111247	130111247	C	T	SNP	GARNL3	ENST00000373387	human	ensembl	74_37	+1	known	silent	c.1476	p.A492	0.904	smart_Citron	pfam_Citron,pfam_Rap_GAP_dom,smart_Citron,pfscan_Rap_GAP_dom	-	no_errors	GARNL3	HGNC	ENSG00000136895				85	0	0	52	13	20
SWI5	0	genome.wustl.edu	37	9	131038511	131038511	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	131038511	131038511	C	T	SNP	SWI5	ENST00000320188	human	ensembl	74_37	+1	known	silent	c.87	p.G29	0.008	NULL	pfam_DNA-repair_Swi5	-	no_errors	SWI5	HGNC	ENSG00000175854				74	0	0	44	8	15.3846
SPTAN1	0	genome.wustl.edu	37	9	131351145	131351145	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	131351145	131351145	G	A	SNP	SPTAN1	ENST00000358161	human	ensembl	74_37	+1	known	missense	c.2929	p.D977N	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_SH3_domain,prints_Spectrin_alpha_SH3,prints_SH3_domain	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF_hand_dom,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694				102	0	0	76	11	12.6437
LRRC8A	0	genome.wustl.edu	37	9	131670898	131670898	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	131670898	131670898	G	A	SNP	LRRC8A	ENST00000259324	human	ensembl	74_37	+1	known	silent	c.1455	p.A485	0.007	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8A	HGNC	ENSG00000136802				57	0	0	24	5	17.2414
ASS1	0	genome.wustl.edu	37	9	133355118	133355118	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	133355118	133355118	T	C	SNP	ASS1	ENST00000352480	human	ensembl	74_37	+1	known	missense	c.704	p.V235A	1.000	pfam_Arginosuc_synth,tigrfam_Arginosuc_synth	pfam_Arginosuc_synth,pfam_QueC,tigrfam_Arginosuc_synth	-	no_errors	ASS1	HGNC	ENSG00000130707				148	0	0	101	23	18.5484
TSC1	0	genome.wustl.edu	37	9	135786042	135786042	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	135786042	135786042	G	T	SNP	TSC1	ENST00000298552	human	ensembl	74_37	-1	known	silent	c.1179	p.T393	1.000	pfam_Hamartin	pfam_Hamartin,superfamily_ARM-type_fold	-	no_errors	TSC1	HGNC	ENSG00000165699				278	0	0	247	17	6.43939
COL5A1	0	genome.wustl.edu	37	9	137591908	137591908	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	137591908	137591908	C	T	SNP	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	missense	c.431	p.T144M	0.790	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635				109	0	0	69	22	24.1758
COL5A1	0	genome.wustl.edu	37	9	137657580	137657580	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	137657580	137657580	C	T	SNP	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	silent	c.2088	p.P696	0.834	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635				125	0	0	75	21	21.875
SOHLH1	0	genome.wustl.edu	37	9	138588520	138588520	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	138588520	138588520	G	T	SNP	SOHLH1	ENST00000425225	human	ensembl	74_37	-1	known	missense	c.599	p.T200K	0.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SOHLH1	HGNC	ENSG00000165643				63	0	0	41	13	24.0741
SEC16A	0	genome.wustl.edu	37	9	139369938	139369938	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	139369938	139369938	G	T	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	silent	c.2130	p.A710	0.888	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396				39	0	0	15	4	21.0526
ABCA2	0	genome.wustl.edu	37	9	139904454	139904454	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	139904454	139904454	G	A	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	missense	c.6476	p.S2159F	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC	ENSG00000107331				15	0	0	10	2	16.6667
UAP1L1	0	genome.wustl.edu	37	9	139975224	139975224	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	139975224	139975224	G	A	SNP	UAP1L1	ENST00000409858	human	ensembl	74_37	+1	known	missense	c.1262	p.R421H	0.987	pfam_UDPGP_trans	pfam_UDPGP_trans	-	no_errors	UAP1L1	HGNC	ENSG00000197355				114	1	0.869565	86	22	20.3704
PNPLA7	0	genome.wustl.edu	37	9	140361857	140361857	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	140361857	140361857	C	T	SNP	PNPLA7	ENST00000406427	human	ensembl	74_37	-1	known	missense	c.2951	p.G984D	1.000	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA7	HGNC	ENSG00000130653				79	0	0	68	22	24.4444
ELAVL2	0	genome.wustl.edu	37	9	23762085	23762085	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	23762085	23762085	T	C	SNP	ELAVL2	ENST00000380117	human	ensembl	74_37	-1	known	missense	c.148	p.M50V	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL2	HGNC	ENSG00000107105				174	0	0	133	8	5.67376
TOPORS	0	genome.wustl.edu	37	9	32544006	32544006	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	32544006	32544006	T	C	SNP	TOPORS	ENST00000360538	human	ensembl	74_37	-1	known	missense	c.517	p.T173A	0.107	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TOPORS	HGNC	ENSG00000197579				127	0	0	81	18	18.1818
FANCG	0	genome.wustl.edu	37	9	35077266	35077266	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	35077266	35077266	C	T	SNP	FANCG	ENST00000378643	human	ensembl	74_37	-1	known	missense	c.641	p.R214H	0.994	NULL	superfamily_Sig_transdc_His_kin_Hpt_dom,smart_TPR_repeat	-	no_errors	FANCG	HGNC	ENSG00000221829				184	0	0	117	24	17.0213
RUSC2	0	genome.wustl.edu	37	9	35547551	35547551	+	Silent	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	35547551	35547551	A	C	SNP	RUSC2	ENST00000361226	human	ensembl	74_37	+1	known	silent	c.1033	p.R345	0.184	NULL	pfam_Run,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC2	HGNC	ENSG00000198853				161	0	0	120	9	6.97674
CA9	0	genome.wustl.edu	37	9	35676071	35676071	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	35676071	35676071	C	A	SNP	CA9	ENST00000378357	human	ensembl	74_37	+1	known	silent	c.615	p.T205	0.997	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA9	HGNC	ENSG00000107159				44	0	0	25	7	21.875
GNE	0	genome.wustl.edu	37	9	36217375	36217375	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	36217375	36217375	C	T	SNP	GNE	ENST00000396594	human	ensembl	74_37	-1	known	missense	c.2249	p.R750H	1.000	NULL	pfam_UDP_GlcNAc_Epimerase_2,pfam_ROK,prints_Hexokinase,tigrfam_UDP-GlcNAc_Epase	-	no_errors	GNE	HGNC	ENSG00000159921				36	0	0	29	8	21.6216
POLR1E	0	genome.wustl.edu	37	9	37489339	37489339	+	Silent	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	37489339	37489339	C	A	SNP	POLR1E	ENST00000377792	human	ensembl	74_37	+1	known	silent	c.471	p.T157	1.000	pfam_RNA_pol-assoc_fac_A49-like	pfam_RNA_pol-assoc_fac_A49-like	-	no_errors	POLR1E	HGNC	ENSG00000137054				97	0	0	70	23	24.7312
TMEM252	0	genome.wustl.edu	37	9	71155631	71155631	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	71155631	71155631	A	G	SNP	TMEM252	ENST00000377311	human	ensembl	74_37	-1	known	missense	c.100	p.F34L	0.000	NULL	NULL	-	no_errors	TMEM252	HGNC	ENSG00000181778				73	0	0	42	8	16
APBA1	0	genome.wustl.edu	37	9	72067197	72067197	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	72067197	72067197	G	T	SNP	APBA1	ENST00000265381	human	ensembl	74_37	-1	known	silent	c.1809	p.S603	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA1	HGNC	ENSG00000107282				105	0	0	57	13	18.5714
KLF9	0	genome.wustl.edu	37	9	73002896	73002896	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	73002896	73002896	C	T	SNP	KLF9	ENST00000377126	human	ensembl	74_37	-1	known	nonsense	c.531	p.W177*	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF9	HGNC	ENSG00000119138				46	0	0	37	6	13.9535
PRUNE2	0	genome.wustl.edu	37	9	79325430	79325430	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	79325430	79325430	A	G	SNP	PRUNE2	ENST00000428286	human	ensembl	74_37	-1	known	missense	c.683	p.L228P	0.822	NULL	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	PRUNE2	HGNC	ENSG00000106772				46	0	0	42	5	10.6383
VPS13A	0	genome.wustl.edu	37	9	79853105	79853105	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	79853105	79853105	G	A	SNP	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	missense	c.1783	p.A595T	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				78	0	0	69	7	9.21053
DAPK1	0	genome.wustl.edu	37	9	90321730	90321730	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	90321730	90321730	C	T	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	silent	c.3819	p.P1273	0.016	NULL	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730				74	0	0	36	12	25
SEMA4D	0	genome.wustl.edu	37	9	92003641	92003641	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	92003641	92003641	G	A	SNP	SEMA4D	ENST00000356444	human	ensembl	74_37	-1	known	silent	c.1017	p.H339	0.032	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,pfam_Immunoglobulin,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4D	HGNC	ENSG00000187764				48	0	0	41	10	19.6078
ROR2	0	genome.wustl.edu	37	9	94493365	94493365	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	94493365	94493365	C	T	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	missense	c.1010	p.C337Y	1.000	pirsf_Tyr_kinase_rcpt_ROR,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR2	HGNC	ENSG00000169071				93	0	0	60	13	17.8082
IARS	0	genome.wustl.edu	37	9	95013120	95013120	+	RNA	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	95013120	95013120	T	C	SNP	IARS	ENST00000467876	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IARS	HGNC	ENSG00000196305				74	0	0	47	17	26.5625
DMRT3	0	genome.wustl.edu	37	9	990661	990661	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	990661	990661	C	T	SNP	DMRT3	ENST00000190165	human	ensembl	74_37	+1	known	nonsense	c.1075	p.Q359*	1.000	NULL	pfam_DM_DNA-bd,pfam_DMA,superfamily_DM_DNA-bd,superfamily_UBA-like,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRT3	HGNC	ENSG00000064218				98	0	0	91	13	12.5
CDC14B	0	genome.wustl.edu	37	9	99284796	99284796	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	99284796	99284796	A	G	SNP	CDC14B	ENST00000375241	human	ensembl	74_37	-1	known	silent	c.1335	p.I445	0.873	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	CDC14B	HGNC	ENSG00000081377				84	0	0	55	17	23.6111
TRMT2B	0	genome.wustl.edu	37	X	100277016	100277016	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	100277016	100277016	T	A	SNP	TRMT2B	ENST00000372935	human	ensembl	74_37	-1	known	missense	c.792	p.E264D	0.997	NULL	pfam_U5_MeTrfase,pfam_Small_mtfrase_dom	-	no_errors	TRMT2B	HGNC	ENSG00000188917				55	0	0	25	12	32.4324
HNRNPH2	0	genome.wustl.edu	37	X	100667763	100667763	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	100667763	100667763	G	A	SNP	HNRNPH2	ENST00000316594	human	ensembl	74_37	+1	known	missense	c.787	p.D263N	1.000	pfam_Znf_CHHC	pfam_RRM_dom,pfam_Znf_CHHC,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPH2	HGNC	ENSG00000126945				60	0	0	27	27	50
RAB40AL	0	genome.wustl.edu	37	X	102192725	102192725	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	102192725	102192725	A	T	SNP	RAB40AL	ENST00000218249	human	ensembl	74_37	+1	known	missense	c.479	p.N160I	1.000	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_SOCS_C,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,smart_SOCS_C,pfscan_SOCS_C,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB40AL	HGNC	ENSG00000102128				48	0	0	19	16	45.7143
NGFRAP1	0	genome.wustl.edu	37	X	102632690	102632690	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	102632690	102632690	C	T	SNP	NGFRAP1	ENST00000299872	human	ensembl	74_37	+1	known	missense	c.271	p.R91C	1.000	pfam_TF_A-like/BEX-like,pirsf_BEX	pfam_TF_A-like/BEX-like,pirsf_BEX	-	no_errors	NGFRAP1	HGNC	ENSG00000166681				108	0	0	48	16	25
COL4A5	0	genome.wustl.edu	37	X	107867547	107867547	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	107867547	107867547	G	A	SNP	COL4A5	ENST00000328300	human	ensembl	74_37	+1	known	missense	c.2999	p.G1000E	1.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A5	HGNC	ENSG00000188153				22	0	0	13	3	18.75
SMARCA1	0	genome.wustl.edu	37	X	128615070	128615070	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	128615070	128615070	G	A	SNP	SMARCA1	ENST00000371122	human	ensembl	74_37	-1	known	silent	c.2310	p.S770	0.857	pfam_ISWI_HAND-dom,superfamily_ISWI_HAND-dom	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038				31	0	0	26	4	13.3333
ZDHHC9	0	genome.wustl.edu	37	X	128975838	128975838	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	128975838	128975838	G	A	SNP	ZDHHC9	ENST00000357166	human	ensembl	74_37	-1	known	silent	c.84	p.R28	0.001	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC9	HGNC	ENSG00000188706				116	0	0	58	28	32.5581
VGLL1	0	genome.wustl.edu	37	X	135631047	135631047	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	135631047	135631047	C	A	SNP	VGLL1	ENST00000370634	human	ensembl	74_37	+1	known	missense	c.514	p.L172I	0.226	NULL	pfam_Vg_Tdu,smart_TDU_repeat	-	no_errors	VGLL1	HGNC	ENSG00000102243				131	0	0	42	41	49.3976
F9	0	genome.wustl.edu	37	X	138643010	138643010	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	138643010	138643010	C	T	SNP	F9	ENST00000218099	human	ensembl	74_37	+1	known	silent	c.834	p.V278	0.030	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_FX,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_GLA_domain,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Peptidase_S1,pirsf_Pept_S1A_FX,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F9	HGNC	ENSG00000101981				61	0	0	31	12	27.907
CSF2RA	0	genome.wustl.edu	37	X	1413263	1413263	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	1413263	1413263	C	T	SNP	CSF2RA	ENST00000417535	human	ensembl	74_37	+1	known	missense	c.689	p.T230M	0.000	superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	CSF2RA	HGNC	ENSG00000198223				274	0	0	204	29	12.4464
SLC25A6	0	genome.wustl.edu	37	X	1506203	1506203	+	Silent	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	1506203	1506203	C	T	SNP	SLC25A6	ENST00000381401	human	ensembl	74_37	-1	known	silent	c.708	p.R236	0.993	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier,prints_Aden_trnslctor,prints_Mit_uncoupling	-	no_errors	SLC25A6	HGNC	ENSG00000169100				169	0	0	98	35	26.3158
ENSG00000266560	0	genome.wustl.edu	37	X	151283727	151283727	+	RNA	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	151283727	151283727	T	C	SNP	ENSG00000266560	ENST00000509345	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-1007I13.4	Clone_based_vega_gene	ENSG00000266560				93	0	0	45	23	33.8235
FAM58A	0	genome.wustl.edu	37	X	152858040	152858040	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	152858040	152858040	G	A	SNP	FAM58A	ENST00000406277	human	ensembl	74_37	-1	known	missense	c.575	p.A192V	1.000	superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	FAM58A	HGNC	ENSG00000147382				28	0	0	15	15	50
HCFC1	0	genome.wustl.edu	37	X	153220523	153220523	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	153220523	153220523	G	A	SNP	HCFC1	ENST00000310441	human	ensembl	74_37	-1	known	silent	c.3327	p.C1109	0.863	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534				34	0	0	7	3	30
ASMT	0	genome.wustl.edu	37	X	1734120	1734120	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	1734120	1734120	C	T	SNP	ASMT	ENST00000381241	human	ensembl	74_37	+1	known	missense	c.28	p.R10C	0.003	pirsf_COMT	pfam_O_MeTrfase_2,pirsf_COMT	-	no_errors	ASMT	HGNC	ENSG00000196433				22	0	0	11	3	21.4286
PLCXD1	0	genome.wustl.edu	37	X	215824	215824	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	215824	215824	C	T	SNP	PLCXD1	ENST00000381657	human	ensembl	74_37	+1	known	missense	c.794	p.P265L	0.995	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	-	no_errors	PLCXD1	HGNC	ENSG00000182378				85	0	0	71	11	13.4146
PCYT1B	0	genome.wustl.edu	37	X	24593350	24593350	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	24593350	24593350	T	C	SNP	PCYT1B	ENST00000379144	human	ensembl	74_37	-1	known	missense	c.794	p.N265S	0.979	NULL	pfam_Cyt_trans-like,tigrfam_Cyt_trans-like	-	no_errors	PCYT1B	HGNC	ENSG00000102230				50	0	0	29	10	25.641
MAGEB10	0	genome.wustl.edu	37	X	27839447	27839447	+	Silent	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	27839447	27839447	A	G	SNP	MAGEB10	ENST00000356790	human	ensembl	74_37	+1	known	silent	c.24	p.K8	0.001	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB10	HGNC	ENSG00000177689				51	0	0	33	6	15.3846
ARSF	0	genome.wustl.edu	37	X	2998955	2998955	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	2998955	2998955	C	T	SNP	ARSF	ENST00000359361	human	ensembl	74_37	+1	known	missense	c.307	p.R103C	0.577	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSF	HGNC	ENSG00000062096				32	0	0	17	21	55.2632
ELK1	0	genome.wustl.edu	37	X	47509930	47509930	+	RNA	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	47509930	47509930	G	A	SNP	ELK1	ENST00000468956	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	ELK1	HGNC	ENSG00000126767				16	0	0	6	7	53.8462
FGD1	0	genome.wustl.edu	37	X	54491964	54491964	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	54491964	54491964	C	T	SNP	FGD1	ENST00000375135	human	ensembl	74_37	-1	known	missense	c.1556	p.R519H	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD1	HGNC	ENSG00000102302				27	0	0	6	4	40
PFKFB1	0	genome.wustl.edu	37	X	54964064	54964064	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	54964064	54964064	G	A	SNP	PFKFB1	ENST00000375006	human	ensembl	74_37	-1	known	missense	c.1192	p.R398W	1.000	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase	pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	-	no_errors	PFKFB1	HGNC	ENSG00000158571				42	0	0	13	12	48
ZXDB	0	genome.wustl.edu	37	X	57620221	57620221	+	Silent	SNP	T	T	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	57620221	57620221	T	G	SNP	ZXDB	ENST00000374888	human	ensembl	74_37	+1	known	silent	c.1740	p.A580	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDB	HGNC	ENSG00000198455				89	0	0	64	5	7.24638
NLGN4X	0	genome.wustl.edu	37	X	5821684	5821684	+	Silent	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	5821684	5821684	G	A	SNP	NLGN4X	ENST00000381093	human	ensembl	74_37	-1	known	silent	c.1095	p.D365	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN4X	HGNC	ENSG00000146938				84	0	0	44	6	12
SPIN4	0	genome.wustl.edu	37	X	62570234	62570234	+	Silent	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	62570234	62570234	G	T	SNP	SPIN4	ENST00000335144	human	ensembl	74_37	-1	known	silent	c.465	p.T155	0.999	pfam_Spin_Ssty	pfam_Spin_Ssty	-	no_errors	SPIN4	HGNC	ENSG00000186767				90	0	0	28	38	57.5758
ARHGEF9	0	genome.wustl.edu	37	X	62893974	62893974	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	62893974	62893974	G	A	SNP	ARHGEF9	ENST00000253401	human	ensembl	74_37	-1	known	missense	c.868	p.R290C	1.000	superfamily_DH-domain	pfam_DH-domain,pfam_SH3_2,pfam_SH3_domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF9	HGNC	ENSG00000131089				60	0	0	37	4	9.7561
EDA2R	0	genome.wustl.edu	37	X	65822496	65822496	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	65822496	65822496	A	C	SNP	EDA2R	ENST00000253392	human	ensembl	74_37	-1	known	missense	c.496	p.F166V	0.992	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_27	-	no_errors	EDA2R	HGNC	ENSG00000131080				13	0	0	7	6	46.1538
AR	0	genome.wustl.edu	37	X	66765161	66765161	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	66765161	66765161	A	T	SNP	AR	ENST00000374690	human	ensembl	74_37	+1	known	missense	c.173	p.Q58L	0.920	pfam_Andrgn_rcpt	pfam_Andrgn_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Andrgn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	AR	HGNC	ENSG00000169083				28	0	0	18	7	28
EFNB1	0	genome.wustl.edu	37	X	68059551	68059551	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	68059551	68059551	G	A	SNP	EFNB1	ENST00000204961	human	ensembl	74_37	+1	known	missense	c.451	p.G151S	1.000	pfam_Ephrin,superfamily_Cupredoxin	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	-	no_errors	EFNB1	HGNC	ENSG00000090776				26	0	0	12	5	29.4118
CDX4	0	genome.wustl.edu	37	X	72667577	72667577	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	72667577	72667577	C	T	SNP	CDX4	ENST00000373514	human	ensembl	74_37	+1	known	missense	c.488	p.T163M	0.988	pfam_Caudal_activation_dom	pfam_Caudal_activation_dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	CDX4	HGNC	ENSG00000131264				46	0	0	26	11	29.7297
XIST	0	genome.wustl.edu	37	X	73061420	73061420	+	RNA	SNP	C	C	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	73061420	73061420	C	A	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				43	0	0	14	13	48.1481
XIST	0	genome.wustl.edu	37	X	73071163	73071163	+	RNA	SNP	A	A	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	73071163	73071163	A	G	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				115	0	0	45	38	45.7831
PCDH11Y	0	genome.wustl.edu	37	Y	4967202	4967202	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	Y	4967202	4967202	G	T	SNP	PCDH11Y	ENST00000215473	human	ensembl	74_37	+1	known	missense	c.1583	p.G528V	0.971	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11Y	HGNC	ENSG00000099715				59	0	0	36	9	20
COL11A1	0	genome.wustl.edu	37	1	103474067	103474067	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	103474067	103474067	C	-	DEL	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	frame_shift_del	c.1671	p.P558fs	0.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				104	0	0	89	8	8.24742
CELSR2	0	genome.wustl.edu	37	1	109793887	109793888	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	109793887	109793888	-	C	INS	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	frame_shift_ins	c.1186_1187	p.Q398fs	0.800:0.913	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126				119	0	0	84	13	13.4021
EPS8L3	0	genome.wustl.edu	37	1	110300580	110300580	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	110300580	110300580	T	-	DEL	EPS8L3	ENST00000369805	human	ensembl	74_37	-1	known	frame_shift_del	c.821	p.N274fs	0.352	NULL	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L3	HGNC	ENSG00000198758				192	0	0	100	26	20.6349
MTOR	0	genome.wustl.edu	37	1	11192968	11192968	+	RNA	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	11192968	11192968	G	-	DEL	MTOR	ENST00000495435	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTOR	HGNC	ENSG00000198793				22	0	0	14	5	26.3158
TXNIP	0	genome.wustl.edu	37	1	145438750	145438750	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	145438750	145438750	T	-	DEL	TXNIP	ENST00000475171	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TXNIP	HGNC	ENSG00000117289				50	0	0	43	6	12.2449
ANKRD34A	0	genome.wustl.edu	37	1	145473439	145473439	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	145473439	145473439	G	-	DEL	ANKRD34A	ENST00000323397	human	ensembl	74_37	+1	known	frame_shift_del	c.111	p.E39fs	0.980	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34A	HGNC	ENSG00000181039				146	0	0	136	11	7.48299
BCL9	0	genome.wustl.edu	37	1	147091500	147091501	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	147091500	147091501	-	C	INS	BCL9	ENST00000234739	human	ensembl	74_37	+1	known	frame_shift_ins	c.1539_1540	p.P516fs	1.000:1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128				206	0	0	169	11	6.11111
SNAPIN	0	genome.wustl.edu	37	1	153633753	153633753	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	153633753	153633753	C	-	DEL	SNAPIN	ENST00000368685	human	ensembl	74_37	+1	known	frame_shift_del	c.387	p.P131fs	0.998	pirsf_Snapin	pirsf_Snapin	-	no_errors	SNAPIN	HGNC	ENSG00000143553				81	0	0	73	6	7.59494
PYGO2	0	genome.wustl.edu	37	1	154932027	154932028	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	154932027	154932028	-	G	INS	PYGO2	ENST00000368457	human	ensembl	74_37	-1	known	frame_shift_ins	c.449_448	p.Q150fs	1.000:0.997	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PYGO2	HGNC	ENSG00000163348				120	0	0	95	13	12.037
FDPS	0	genome.wustl.edu	37	1	155288501	155288502	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	155288501	155288502	-	CC	INS	FDPS	ENST00000356657	human	ensembl	74_37	+1	known	frame_shift_ins	c.730_731	p.Q246fs	0.991:0.995	pfam_Polyprenyl_synt,superfamily_Terpenoid_synth	pfam_Polyprenyl_synt,superfamily_Terpenoid_synth	-	no_errors	FDPS	HGNC	ENSG00000160752				97	0	0	65	6	8.4507
NES	0	genome.wustl.edu	37	1	156642739	156642740	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	156642739	156642740	AG	-	DEL	NES	ENST00000368223	human	ensembl	74_37	-1	known	frame_shift_del	c.1241_1240	p.L414fs	0.000:0.000	NULL	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688				174	0	0	115	22	16.0584
CD84	0	genome.wustl.edu	37	1	160520868	160520869	+	RNA	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	160520868	160520869	-	T	INS	CD84	ENST00000466767	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010:0.000	-	-	-	no_errors	CD84	HGNC	ENSG00000066294				93	0	0	62	11	15.0685
EPHA2	0	genome.wustl.edu	37	1	16462199	16462199	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	16462199	16462199	G	-	DEL	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	frame_shift_del	c.1379	p.P460fs	0.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627				161	0	0	107	12	10.084
ALDH9A1	0	genome.wustl.edu	37	1	165634376	165634376	+	RNA	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	165634376	165634376	A	-	DEL	ALDH9A1	ENST00000463610	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ALDH9A1	HGNC	ENSG00000143149				32	0	0	30	4	11.7647
PIGC	0	genome.wustl.edu	37	1	172411516	172411516	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	172411516	172411516	G	-	DEL	PIGC	ENST00000258324	human	ensembl	74_37	-1	known	frame_shift_del	c.247	p.H83fs	0.172	pfam_Plno_GlcNAc_GPI2,pirsf_Plno_GlcNAc_GPI2	pfam_Plno_GlcNAc_GPI2,pirsf_Plno_GlcNAc_GPI2	-	no_errors	PIGC	HGNC	ENSG00000135845				123	0	0	77	14	15.3846
ATP13A2	0	genome.wustl.edu	37	1	17322499	17322499	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	17322499	17322499	C	-	DEL	ATP13A2	ENST00000326735	human	ensembl	74_37	-1	known	frame_shift_del	c.1514	p.G505fs	1.000	tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A2	HGNC	ENSG00000159363				97	0	0	55	8	12.6984
SLC9C2	0	genome.wustl.edu	37	1	173551149	173551150	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	173551149	173551150	-	A	INS	SLC9C2	ENST00000367714	human	ensembl	74_37	-1	known	splice_site_ins	c.641-3_641-2	e6-2	0.657:0.060	-	-	-	no_errors	SLC9C2	HGNC	ENSG00000162753				37	0	0	19	8	29.6296
RASAL2	0	genome.wustl.edu	37	1	178412041	178412041	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	178412041	178412041	A	-	DEL	RASAL2	ENST00000367649	human	ensembl	74_37	+1	known	frame_shift_del	c.1159	p.K389fs	1.000	superfamily_C2_dom,smart_C2_dom	pfam_DUF3498,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,superfamily_PP1_inhibitor,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	RASAL2	HGNC	ENSG00000075391				136	1	0.729927	74	22	22.9167
GABRD	0	genome.wustl.edu	37	1	1961598	1961598	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	1961598	1961598	G	-	DEL	GABRD	ENST00000378585	human	ensembl	74_37	+1	known	frame_shift_del	c.1236	p.G414fs	0.000	superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAd_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRD	HGNC	ENSG00000187730				157	0	0	117	10	7.87402
SKI	0	genome.wustl.edu	37	1	2160472	2160474	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	2160472	2160474	CTT	-	DEL	SKI	ENST00000378536	human	ensembl	74_37	+1	known	in_frame_del	c.267_269	p.F91in_frame_del	1.000:1.000:1.000	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	pfam_c-SKI_SMAD4-bd_dom,pfam_Transform_Ski,superfamily_SAND_dom-like,superfamily_DNA-bd_dom_put	-	no_errors	SKI	HGNC	ENSG00000157933				34	0	0	31	4	11.4286
TGFB2	0	genome.wustl.edu	37	1	218609371	218609371	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	218609371	218609371	A	-	DEL	TGFB2	ENST00000366929	human	ensembl	74_37	+1	known	frame_shift_del	c.898	p.N302fs	1.000	pirsf_TGF-beta,prints_TGFb2	pirsf_TGF-beta,pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_TGFb2,prints_TGF-beta	-	no_errors	TGFB2	HGNC	ENSG00000092969				91	0	0	72	12	14.2857
PARP1	0	genome.wustl.edu	37	1	226567647	226567647	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	226567647	226567647	T	-	DEL	PARP1	ENST00000366794	human	ensembl	74_37	-1	known	frame_shift_del	c.1519	p.S507fs	1.000	pirsf_NAD_ADPRT	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_Znf_PARP,pfam_PADR1,pfam_WGR_domain,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_WGR_domain,pirsf_NAD_ADPRT,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP1	HGNC	ENSG00000143799				228	0	0	164	34	17.1717
ARID4B	0	genome.wustl.edu	37	1	235345419	235345419	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	235345419	235345419	T	-	DEL	ARID4B	ENST00000264183	human	ensembl	74_37	-1	known	frame_shift_del	c.2815	p.T939fs	1.000	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4B	HGNC	ENSG00000054267				153	0	0	105	20	16
ASAP3	0	genome.wustl.edu	37	1	23779231	23779231	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	23779231	23779231	G	-	DEL	ASAP3	ENST00000336689	human	ensembl	74_37	-1	known	frame_shift_del	c.382	p.L128fs	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP3	HGNC	ENSG00000088280				297	0	0	240	13	5.13834
TCEB3	0	genome.wustl.edu	37	1	24078202	24078203	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	24078202	24078203	AA	-	DEL	TCEB3	ENST00000418390	human	ensembl	74_37	+1	known	frame_shift_del	c.1185_1186	p.K396fs	0.008:0.204	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,pfscan_F-box_dom	-	no_errors	TCEB3	HGNC	ENSG00000011007				176	0	0	117	20	14.5985
ARID1A	0	genome.wustl.edu	37	1	27088659	27088659	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	27088659	27088659	C	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.2268	p.Q758fs	0.998	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				175	0	0	137	22	13.8365
ARID1A	0	genome.wustl.edu	37	1	27106078	27106078	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	27106078	27106078	C	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.5689	p.P1898fs	0.966	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				166	0	0	110	13	10.5691
C1orf172	0	genome.wustl.edu	37	1	27278443	27278443	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	27278443	27278443	G	-	DEL	C1orf172	ENST00000320567	human	ensembl	74_37	-1	known	frame_shift_del	c.429	p.S144fs	0.427	NULL	NULL	-	no_errors	C1orf172	HGNC	ENSG00000175707				71	0	0	52	11	17.4603
WDTC1	0	genome.wustl.edu	37	1	27621108	27621109	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	27621108	27621109	GG	-	DEL	WDTC1	ENST00000319394	human	ensembl	74_37	+1	known	frame_shift_del	c.861_862	p.E290fs	1.000:1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784				67	0	0	45	6	11.7647
PHACTR4	0	genome.wustl.edu	37	1	28800273	28800273	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	28800273	28800273	C	-	DEL	PHACTR4	ENST00000373836	human	ensembl	74_37	+1	known	frame_shift_del	c.1061	p.P356fs	1.000	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR4	HGNC	ENSG00000204138				248	1	0.401606	199	43	17.7686
MEGF6	0	genome.wustl.edu	37	1	3418429	3418429	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	3418429	3418429	C	-	DEL	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	frame_shift_del	c.2245	p.A749fs	0.930	smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591				62	0	0	43	5	10.4167
DLGAP3	0	genome.wustl.edu	37	1	35365852	35365852	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	35365852	35365852	C	-	DEL	DLGAP3	ENST00000235180	human	ensembl	74_37	-1	known	frame_shift_del	c.1130	p.G377fs	1.000	NULL	pfam_GKAP	-	no_errors	DLGAP3	HGNC	ENSG00000116544				204	1	0.487805	144	25	14.7929
ENSG00000271554	0	genome.wustl.edu	37	1	36475027	36475027	+	RNA	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	36475027	36475027	A	-	DEL	ENSG00000271554	ENST00000479395	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	RP4-665N4.8	Clone_based_vega_gene	ENSG00000271554				41	0	0	25	14	35.8974
LRRC41	0	genome.wustl.edu	37	1	46726877	46726877	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	46726877	46726877	T	-	DEL	LRRC41	ENST00000496156	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LRRC41	HGNC	ENSG00000132128				37	0	0	20	6	23.0769
CDKN2C	0	genome.wustl.edu	37	1	51436083	51436084	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	51436083	51436084	-	G	INS	CDKN2C	ENST00000262662	human	ensembl	74_37	+1	known	frame_shift_ins	c.43_44	p.D17fs	1.000:1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2C	HGNC	ENSG00000123080				111	0	0	67	7	9.45946
NRD1	0	genome.wustl.edu	37	1	52260252	52260254	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	52260252	52260254	CTC	-	DEL	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	in_frame_del	c.2871_2869	p.E957in_frame_del	1.000:1.000:1.000	pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	NRD1	HGNC	ENSG00000078618				443	0	0	383	25	6.12745
ZCCHC11	0	genome.wustl.edu	37	1	52991779	52991780	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	52991779	52991780	-	T	INS	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	frame_shift_ins	c.174_173	p.N58fs	1.000:0.998	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744				71	0	0	51	8	13.5593
CPT2	0	genome.wustl.edu	37	1	53676936	53676938	+	In_Frame_Del	DEL	GAT	GAT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	GAT	GAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	53676936	53676938	GAT	-	DEL	CPT2	ENST00000371486	human	ensembl	74_37	+1	known	in_frame_del	c.1590_1592	p.M532in_frame_del	0.003:0.016:0.999	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT2	HGNC	ENSG00000157184				37	0	0	17	4	19.0476
GLIS1	0	genome.wustl.edu	37	1	54060232	54060232	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	54060232	54060232	C	-	DEL	GLIS1	ENST00000312233	human	ensembl	74_37	-1	known	frame_shift_del	c.344	p.G115fs	0.059	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS1	HGNC	ENSG00000174332				77	0	0	51	4	7.27273
INADL	0	genome.wustl.edu	37	1	62263064	62263066	+	In_Frame_Del	DEL	TCA	TCA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	TCA	TCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	62263064	62263066	TCA	-	DEL	INADL	ENST00000371158	human	ensembl	74_37	+1	known	in_frame_del	c.1366_1368	p.S457in_frame_del	0.001:0.000:0.000	superfamily_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_L27,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	INADL	HGNC	ENSG00000132849				135	0	0	103	21	16.9355
SLC45A1	0	genome.wustl.edu	37	1	8390339	8390339	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	8390339	8390339	G	-	DEL	SLC45A1	ENST00000377479	human	ensembl	74_37	+1	known	frame_shift_del	c.888	p.G298fs	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A1	HGNC	ENSG00000162426				209	0	0	146	11	7.00637
SLC2A5	0	genome.wustl.edu	37	1	9107765	9107766	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	9107765	9107766	AT	-	DEL	SLC2A5	ENST00000377424	human	ensembl	74_37	-1	known	frame_shift_del	c.322_321	p.S109fs	1.000:0.996	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,prints_Fru_transpt_5,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A5	HGNC	ENSG00000142583				157	0	0	107	29	21.3235
RWDD3	0	genome.wustl.edu	37	1	95710260	95710260	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	1	95710260	95710260	A	-	DEL	RWDD3	ENST00000263893	human	ensembl	74_37	+1	known	frame_shift_del	c.579	p.S195fs	0.152	NULL	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pfscan_RWD-domain	-	no_errors	RWDD3	HGNC	ENSG00000122481				142	0	0	117	23	16.4286
TCF7L2	0	genome.wustl.edu	37	10	114925402	114925402	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	114925402	114925402	C	-	DEL	TCF7L2	ENST00000355995	human	ensembl	74_37	+1	known	frame_shift_del	c.1531	p.S513fs	1.000	NULL	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7L2	HGNC	ENSG00000148737				204	0	0	150	20	11.7647
VAX1	0	genome.wustl.edu	37	10	118896159	118896160	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	118896159	118896160	-	C	INS	VAX1	ENST00000369206	human	ensembl	74_37	-1	known	frame_shift_ins	c.253_252	p.S84fs	1.000:0.994	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	VAX1	HGNC	ENSG00000148704				89	0	0	69	7	9.21053
OAT	0	genome.wustl.edu	37	10	126091634	126091634	+	RNA	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	126091634	126091634	A	-	DEL	OAT	ENST00000471127	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OAT	HGNC	ENSG00000065154				157	0	0	115	21	15.4412
RPP38	0	genome.wustl.edu	37	10	15146144	15146145	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	15146144	15146145	-	A	INS	RPP38	ENST00000378197	human	ensembl	74_37	+1	known	frame_shift_ins	c.831_832	p.A279fs	0.999:1.000	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	RPP38	HGNC	ENSG00000152464				110	0	0	70	18	20.4545
CREM	0	genome.wustl.edu	37	10	35500573	35500574	+	RNA	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	35500573	35500574	-	T	INS	CREM	ENST00000469517	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.791:0.580	-	-	-	no_errors	CREM	HGNC	ENSG00000095794				78	0	0	36	13	26.5306
ENSG00000235939	0	genome.wustl.edu	37	10	50680934	50680934	+	RNA	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	50680934	50680934	A	-	DEL	ENSG00000235939	ENST00000423283	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-123B3.2	Clone_based_vega_gene	ENSG00000235939				36	0	0	27	4	12.9032
MBL2	0	genome.wustl.edu	37	10	54530515	54530516	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	54530515	54530516	-	G	INS	MBL2	ENST00000373968	human	ensembl	74_37	-1	known	frame_shift_ins	c.219_218	p.G74fs	1.000:1.000	pfam_Collagen	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	MBL2	HGNC	ENSG00000165471				245	0	0	160	35	17.9487
HERC4	0	genome.wustl.edu	37	10	69716603	69716605	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	69716603	69716605	AAA	-	DEL	HERC4	ENST00000480158	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	HERC4	HGNC	ENSG00000148634				68	0	0	39	11	22
PRF1	0	genome.wustl.edu	37	10	72358189	72358189	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	72358189	72358189	C	-	DEL	PRF1	ENST00000373209	human	ensembl	74_37	-1	known	frame_shift_del	c.1288	p.D430fs	0.999	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_MACPF,pfam_C2_dom,superfamily_C2_dom,smart_MACPF,smart_C2_dom,pfscan_C2_dom	-	no_errors	PRF1	HGNC	ENSG00000180644				81	0	0	56	9	13.8462
ZSWIM8	0	genome.wustl.edu	37	10	75560546	75560547	+	RNA	DEL	CC	CC	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	75560546	75560547	CC	-	DEL	ZSWIM8	ENST00000603195	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.749:0.797	-	-	-	no_errors	ZSWIM8	HGNC	ENSG00000214655				29	0	0	18	4	18.1818
PLAU	0	genome.wustl.edu	37	10	75673437	75673438	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	75673437	75673438	-	G	INS	PLAU	ENST00000372764	human	ensembl	74_37	+1	known	frame_shift_ins	c.601_602	p.S204fs	0.156:0.201	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Kringle,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PLAU	HGNC	ENSG00000122861				205	0	0	140	20	12.5
DUSP13	0	genome.wustl.edu	37	10	76868884	76868884	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	76868884	76868884	C	-	DEL	DUSP13	ENST00000372702	human	ensembl	74_37	-1	known	frame_shift_del	c.32	p.G11fs	0.019	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP13	HGNC	ENSG00000079393				74	0	0	55	9	14.0625
SH2D4B	0	genome.wustl.edu	37	10	82369293	82369293	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	82369293	82369293	C	-	DEL	SH2D4B	ENST00000470604	human	ensembl	74_37	+1	known	frame_shift_del	c.968	p.W325fs	0.972	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SH2D4B	HGNC	ENSG00000178217				210	0	0	156	19	10.8571
LRIT1	0	genome.wustl.edu	37	10	85997404	85997404	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	85997404	85997404	G	-	DEL	LRIT1	ENST00000372105	human	ensembl	74_37	-1	known	frame_shift_del	c.161	p.P54fs	0.992	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRIT1	HGNC	ENSG00000148602				135	0	0	87	21	19.4444
LARP4B	0	genome.wustl.edu	37	10	890939	890939	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	890939	890939	T	-	DEL	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	frame_shift_del	c.487	p.T163fs	1.000	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				103	0	0	79	23	22.549
MINPP1	0	genome.wustl.edu	37	10	89268174	89268174	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	89268174	89268174	A	-	DEL	MINPP1	ENST00000371996	human	ensembl	74_37	+1	known	frame_shift_del	c.719	p.N242fs	1.000	pfam_His_Pase_superF_clade-2,pirsf_Histidine_acid_Pase_euk	pfam_His_Pase_superF_clade-2,pirsf_Histidine_acid_Pase_euk	-	no_errors	MINPP1	HGNC	ENSG00000107789				65	0	0	41	10	19.6078
HELLS	0	genome.wustl.edu	37	10	96352051	96352051	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	10	96352051	96352051	A	-	DEL	HELLS	ENST00000371332	human	ensembl	74_37	+1	known	frame_shift_del	c.1971	p.R660fs	0.958	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HELLS	HGNC	ENSG00000119969				75	0	0	56	7	11.1111
DDX10	0	genome.wustl.edu	37	11	108712180	108712180	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	108712180	108712180	A	-	DEL	DDX10	ENST00000322536	human	ensembl	74_37	+1	known	frame_shift_del	c.2224	p.I744fs	0.999	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX10	HGNC	ENSG00000178105				75	0	0	50	12	19.3548
LAYN	0	genome.wustl.edu	37	11	111425990	111425991	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	111425990	111425991	-	A	INS	LAYN	ENST00000375615	human	ensembl	74_37	+1	known	frame_shift_ins	c.657_658	p.T221fs	1.000:1.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	LAYN	HGNC	ENSG00000204381				62	0	0	46	7	13.2075
DSCAML1	0	genome.wustl.edu	37	11	117391911	117391911	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	117391911	117391911	C	-	DEL	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	frame_shift_del	c.1327	p.A443fs	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				227	0	0	158	29	15.508
CCDC153	0	genome.wustl.edu	37	11	119061043	119061043	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	119061043	119061043	G	-	DEL	CCDC153	ENST00000415318	human	ensembl	74_37	-1	known	frame_shift_del	c.599	p.P200fs	1.000	NULL	superfamily_t-SNARE	-	no_errors	CCDC153	HGNC	ENSG00000248712				206	1	0.483092	127	29	18.5897
SRPR	0	genome.wustl.edu	37	11	126137087	126137087	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	126137087	126137087	T	-	DEL	SRPR	ENST00000332118	human	ensembl	74_37	-1	known	frame_shift_del	c.509	p.K170fs	0.991	pfam_Sig_recog_particle_rcpt_asu_N	pfam_Sig_recog_particle_rcpt_asu_N,pfam_SRP54_GTPase_dom,pfam_ArgK,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_Signal_recog_particl_SRP54_hlx,superfamily_Longin-like_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom	-	no_errors	SRPR	HGNC	ENSG00000182934				354	1	0.28169	233	55	19.0972
MUC5B	0	genome.wustl.edu	37	11	1267481	1267481	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	1267481	1267481	C	-	DEL	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	frame_shift_del	c.9380	p.S3129fs	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				142	0	0	107	13	10.8333
MUC5B	0	genome.wustl.edu	37	11	1271252	1271252	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	1271252	1271252	C	-	DEL	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	frame_shift_del	c.13151	p.S4386fs	0.021	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				234	0	0	175	12	6.41711
SOX6	0	genome.wustl.edu	37	11	16339986	16339987	+	RNA	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	16339986	16339987	-	C	INS	SOX6	ENST00000533658	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	SOX6	HGNC	ENSG00000110693				143	0	0	112	24	17.6471
GTF2H1	0	genome.wustl.edu	37	11	18373881	18373883	+	In_Frame_Del	DEL	ATC	ATC	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	ATC	ATC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	18373881	18373883	ATC	-	DEL	GTF2H1	ENST00000265963	human	ensembl	74_37	+1	known	in_frame_del	c.1148_1150	p.H384in_frame_del	1.000:0.976:1.000	NULL	pfam_BSD,pfam_TFIIH_BTF_p62_N,smart_BSD,pfscan_BSD	-	no_errors	GTF2H1	HGNC	ENSG00000110768				236	0	0	163	36	18.0905
PRMT3	0	genome.wustl.edu	37	11	20515777	20515777	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	20515777	20515777	A	-	DEL	PRMT3	ENST00000331079	human	ensembl	74_37	+1	known	frame_shift_del	c.1463	p.K489fs	1.000	pfam_Arg_MeTrfase	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_mo5U34_MeTrfas-like,pfam_Methyltransf_11,pfam_Arg_MeTrfase,pfam_Small_mtfrase_dom,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT3	HGNC	ENSG00000185238				242	0	0	170	18	9.57447
KCNA4	0	genome.wustl.edu	37	11	30033563	30033563	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	30033563	30033563	A	-	DEL	KCNA4	ENST00000328224	human	ensembl	74_37	-1	known	frame_shift_del	c.663	p.F221fs	0.902	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255				133	0	0	85	20	19.0476
EIF3M	0	genome.wustl.edu	37	11	32611130	32611130	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	32611130	32611130	A	-	DEL	EIF3M	ENST00000531120	human	ensembl	74_37	+1	known	frame_shift_del	c.476	p.K161fs	1.000	superfamily_ARM-type_fold	pfam_PCI_dom,superfamily_ARM-type_fold,smart_PCI_dom	-	no_errors	EIF3M	HGNC	ENSG00000149100				119	0	0	84	13	13.4021
RAG2	0	genome.wustl.edu	37	11	36614195	36614195	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	36614195	36614195	T	-	DEL	RAG2	ENST00000311485	human	ensembl	74_37	-1	known	frame_shift_del	c.1524	p.G509fs	0.882	pfam_RAG2	pfam_RAG2,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_Znf_FYVE_PHD	-	no_errors	RAG2	HGNC	ENSG00000175097				101	0	0	55	17	23.6111
PEX16	0	genome.wustl.edu	37	11	45935924	45935924	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	45935924	45935924	G	-	DEL	PEX16	ENST00000241041	human	ensembl	74_37	-1	known	frame_shift_del	c.637	p.L213fs	0.983	pfam_Pex16	pfam_Pex16	-	no_errors	PEX16	HGNC	ENSG00000121680				90	0	0	92	10	9.80392
OR51E2	0	genome.wustl.edu	37	11	4703475	4703475	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	4703475	4703475	A	-	DEL	OR51E2	ENST00000396950	human	ensembl	74_37	-1	known	frame_shift_del	c.467	p.F156fs	0.027	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51E2	HGNC	ENSG00000167332				89	0	0	57	13	18.5714
CTNND1	0	genome.wustl.edu	37	11	57569589	57569589	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	57569589	57569589	A	-	DEL	CTNND1	ENST00000399050	human	ensembl	74_37	+1	known	frame_shift_del	c.1341	p.N449fs	1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND1	HGNC	ENSG00000198561				386	0	0	310	48	13.4078
FAM111B	0	genome.wustl.edu	37	11	58892722	58892725	+	Frame_Shift_Del	DEL	AATT	AATT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AATT	AATT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	58892722	58892725	AATT	-	DEL	FAM111B	ENST00000343597	human	ensembl	74_37	+1	known	frame_shift_del	c.1152_1155	p.N386fs	0.002:0.001:0.000:0.000	NULL	superfamily_Trypsin-like_Pept_dom	-	no_errors	FAM111B	HGNC	ENSG00000189057				169	0	0	113	12	9.6
FAM160A2	0	genome.wustl.edu	37	11	6245432	6245432	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	6245432	6245432	C	-	DEL	FAM160A2	ENST00000265978	human	ensembl	74_37	-1	known	frame_shift_del	c.185	p.G62fs	1.000	NULL	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160A2	HGNC	ENSG00000051009				107	0	0	97	8	7.61905
ENSG00000256690	0	genome.wustl.edu	37	11	62601418	62601418	+	RNA	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	62601418	62601418	G	-	DEL	ENSG00000256690	ENST00000535817	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-727F15.9	Clone_based_vega_gene	ENSG00000256690				105	0	0	71	8	10.1266
MARK2	0	genome.wustl.edu	37	11	63667438	63667440	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	63667438	63667440	CTT	-	DEL	MARK2	ENST00000402010	human	ensembl	74_37	+1	known	in_frame_del	c.624_626	p.F209in_frame_del	0.995:1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK2	HGNC	ENSG00000072518				235	0	0	168	35	17.2414
BRMS1	0	genome.wustl.edu	37	11	66108714	66108714	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	66108714	66108714	C	-	DEL	BRMS1	ENST00000425825	human	ensembl	74_37	-1	known	frame_shift_del	c.321	p.L108fs	0.992	pfam_Sds3	pfam_Sds3	-	no_errors	BRMS1	HGNC	ENSG00000174744				80	0	0	50	8	13.7931
NUMA1	0	genome.wustl.edu	37	11	71725049	71725050	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	71725049	71725050	AG	-	DEL	NUMA1	ENST00000393695	human	ensembl	74_37	-1	known	frame_shift_del	c.3500_3499	p.L1167fs	0.003:0.001	NULL	superfamily_Prefoldin	-	no_errors	NUMA1	HGNC	ENSG00000137497				80	0	0	57	8	12.3077
NDUFC2	0	genome.wustl.edu	37	11	77784147	77784148	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	77784147	77784148	AA	-	DEL	NDUFC2	ENST00000281031	human	ensembl	74_37	-1	known	frame_shift_del	c.207_206	p.F69fs	0.809:0.834	pfam_NADH-UbQ_OxRdtase_b14.5b_su,pirsf_NADH-UbQ_OxRdtase_b14.5b_su	pfam_NADH-UbQ_OxRdtase_b14.5b_su,pirsf_NADH-UbQ_OxRdtase_b14.5b_su	-	no_errors	NDUFC2	HGNC	ENSG00000151366				118	0	0	75	20	21.0526
ENSG00000254420	0	genome.wustl.edu	37	11	78154811	78154812	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	78154811	78154812	AA	-	DEL	ENSG00000254420	ENST00000534168	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.006	-	-	-	no_errors	RP11-452H21.1	Clone_based_vega_gene	ENSG00000254420				68	0	0	20	11	35.4839
TUB	0	genome.wustl.edu	37	11	8118863	8118863	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	8118863	8118863	C	-	DEL	TUB	ENST00000305253	human	ensembl	74_37	+1	known	frame_shift_del	c.941	p.Q316fs	0.999	pfam_Tubby_C,superfamily_Tubby_C-like	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_N,prints_Tubby_C	-	no_errors	TUB	HGNC	ENSG00000166402				189	1	0.526316	150	8	5.06329
TAF1D	0	genome.wustl.edu	37	11	93470382	93470382	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	11	93470382	93470382	A	-	DEL	TAF1D	ENST00000323981	human	ensembl	74_37	-1	known	frame_shift_del	c.483	p.F161fs	0.999	NULL	NULL	-	no_errors	TAF1D	HGNC	ENSG00000166012				46	0	0	37	9	19.5652
TAOK3	0	genome.wustl.edu	37	12	118639156	118639157	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	118639156	118639157	-	T	INS	TAOK3	ENST00000392533	human	ensembl	74_37	-1	known	frame_shift_ins	c.932_931	p.I311fs	1.000:1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK3	HGNC	ENSG00000135090				90	0	0	69	14	16.8675
CAMKK2	0	genome.wustl.edu	37	12	121678620	121678620	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	121678620	121678620	C	-	DEL	CAMKK2	ENST00000324774	human	ensembl	74_37	-1	known	frame_shift_del	c.1649	p.G550fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKK2	HGNC	ENSG00000110931				148	0	0	120	20	14.2857
BCL7A	0	genome.wustl.edu	37	12	122492892	122492892	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	122492892	122492892	G	-	DEL	BCL7A	ENST00000538010	human	ensembl	74_37	+1	known	frame_shift_del	c.621	p.D209fs	0.000	NULL	pfam_BCL7	-	no_errors	BCL7A	HGNC	ENSG00000110987				154	0	0	102	25	19.685
RPL22P19	0	genome.wustl.edu	37	12	125420367	125420367	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	125420367	125420367	T	-	DEL	RPL22P19	ENST00000480427	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL22P19	HGNC	ENSG00000241129				18	0	0	2	3	60
GPR133	0	genome.wustl.edu	37	12	131623850	131623851	+	RNA	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	131623850	131623851	-	C	INS	GPR133	ENST00000540207	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	GPR133	HGNC	ENSG00000111452				18	0	0	10	4	28.5714
PLCZ1	0	genome.wustl.edu	37	12	18854469	18854469	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	18854469	18854469	T	-	DEL	PLCZ1	ENST00000266505	human	ensembl	74_37	-1	known	frame_shift_del	c.983	p.K328fs	0.000	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCZ1	HGNC	ENSG00000139151				126	0	0	79	12	13.1868
PLEKHA5	0	genome.wustl.edu	37	12	19460408	19460408	+	RNA	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	19460408	19460408	A	-	DEL	PLEKHA5	ENST00000510738	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.931	-	-	-	no_errors	PLEKHA5	HGNC	ENSG00000052126				40	0	0	25	7	21.875
ZCRB1	0	genome.wustl.edu	37	12	42706971	42706971	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	42706971	42706971	T	-	DEL	ZCRB1	ENST00000266529	human	ensembl	74_37	-1	known	frame_shift_del	c.552	p.K184fs	0.732	NULL	pfam_RRM_dom,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_RRM_dom_euk,smart_RRM_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_RRM_dom	-	no_errors	ZCRB1	HGNC	ENSG00000139168				51	0	0	37	6	13.9535
PUS7L	0	genome.wustl.edu	37	12	44148392	44148392	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	44148392	44148392	A	-	DEL	PUS7L	ENST00000344862	human	ensembl	74_37	-1	known	frame_shift_del	c.657	p.F219fs	1.000	superfamily_PsdUridine_synth_cat_dom,pirsf_PsdUridine_synth_TruD_euk	pfam_PsdUridine_synth_TruD,superfamily_PsdUridine_synth_cat_dom,pirsf_PsdUridine_synth_TruD_euk,pfscan_PsdUridine_synth_TruD_insert,tigrfam_PsdUridine_synth_TruD	-	no_errors	PUS7L	HGNC	ENSG00000129317				61	0	0	45	13	22.4138
KRT73	0	genome.wustl.edu	37	12	53001991	53001991	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	53001991	53001991	T	-	DEL	KRT73	ENST00000305748	human	ensembl	74_37	-1	known	frame_shift_del	c.1612	p.T538fs	0.738	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT73	HGNC	ENSG00000186049				309	0	0	212	48	18.4615
KRT73	0	genome.wustl.edu	37	12	53012151	53012151	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	53012151	53012151	C	-	DEL	KRT73	ENST00000305748	human	ensembl	74_37	-1	known	frame_shift_del	c.158	p.G53fs	0.036	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT73	HGNC	ENSG00000186049				230	0	0	153	27	15
TENC1	0	genome.wustl.edu	37	12	53452903	53452903	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	53452903	53452903	C	-	DEL	TENC1	ENST00000314276	human	ensembl	74_37	+1	known	frame_shift_del	c.1508	p.P505fs	0.202	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TENC1	HGNC	ENSG00000111077				87	0	0	72	11	13.253
NAB2	0	genome.wustl.edu	37	12	57485491	57485491	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	57485491	57485491	G	-	DEL	NAB2	ENST00000300131	human	ensembl	74_37	+1	known	frame_shift_del	c.667	p.L225fs	0.957	pfam_NAB_co-repressor_dom	pfam_NAB_co-repressor_dom,pfam_Nab_N,superfamily_SAM/pointed	-	no_errors	NAB2	HGNC	ENSG00000166886				91	0	0	53	23	30.2632
MBD6	0	genome.wustl.edu	37	12	57921732	57921732	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	57921732	57921732	G	-	DEL	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_del	c.2338	p.G782fs	1.000	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987				131	0	0	90	15	14.2857
XPOT	0	genome.wustl.edu	37	12	64812755	64812755	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	64812755	64812755	T	-	DEL	XPOT	ENST00000332707	human	ensembl	74_37	+1	known	frame_shift_del	c.370	p.F126fs	1.000	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPOT	HGNC	ENSG00000184575				146	0	0	113	19	14.3939
BEST3	0	genome.wustl.edu	37	12	70091534	70091534	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	70091534	70091534	A	-	DEL	BEST3	ENST00000330891	human	ensembl	74_37	-1	known	frame_shift_del	c.45	p.F15fs	1.000	NULL	pfam_Bestrophin/UPF0187	-	no_errors	BEST3	HGNC	ENSG00000127325				141	0	0	111	19	14.6154
TMEM19	0	genome.wustl.edu	37	12	72094768	72094768	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	72094768	72094768	G	-	DEL	TMEM19	ENST00000266673	human	ensembl	74_37	+1	known	frame_shift_del	c.1004	p.*337fs	0.149	NULL	pfam_DUF92_TMEM19	-	no_errors	TMEM19	HGNC	ENSG00000139291				210	0	0	174	29	14.2857
M6PR	0	genome.wustl.edu	37	12	9095102	9095102	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	9095102	9095102	C	-	DEL	M6PR	ENST00000000412	human	ensembl	74_37	-1	known	frame_shift_del	c.621	p.F208fs	0.715	prints_Man_6_P_rcpt	superfamily_Man6P_isomerase_rcpt-bd_dom,prints_Man_6_P_rcpt	-	no_errors	M6PR	HGNC	ENSG00000003056				145	0	0	91	12	11.6505
NEDD1	0	genome.wustl.edu	37	12	97337434	97337434	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	12	97337434	97337434	T	-	DEL	NEDD1	ENST00000557644	human	ensembl	74_37	+1	known	frame_shift_del	c.1412	p.F472fs	0.976	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NEDD1	HGNC	ENSG00000139350				96	0	0	82	20	19.6078
COL4A1	0	genome.wustl.edu	37	13	110838820	110838821	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	110838820	110838821	-	G	INS	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	frame_shift_ins	c.1809_1808	p.G604fs	0.909:1.000	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498				119	0	0	65	8	10.9589
RNF6	0	genome.wustl.edu	37	13	26788241	26788241	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	26788241	26788241	A	-	DEL	RNF6	ENST00000346166	human	ensembl	74_37	-1	known	frame_shift_del	c.1778	p.L593fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF6	HGNC	ENSG00000127870				198	0	0	140	13	8.49673
DCLK1	0	genome.wustl.edu	37	13	36521570	36521571	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	36521570	36521571	-	A	INS	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	frame_shift_ins	c.748_747	p.G249fs	1.000:1.000	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083				60	0	0	40	6	13.0435
DCLK1	0	genome.wustl.edu	37	13	36686033	36686033	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	36686033	36686033	T	-	DEL	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	frame_shift_del	c.696	p.K232fs	1.000	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083				138	0	0	97	25	20.4918
KBTBD6	0	genome.wustl.edu	37	13	41705321	41705322	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	41705321	41705322	-	C	INS	KBTBD6	ENST00000379485	human	ensembl	74_37	-1	known	frame_shift_ins	c.1327_1326	p.R442fs	0.947:0.558	pfam_Kelch_1,smart_Kelch_1	pfam_BTB_POZ,pfam_BACK,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KBTBD6	HGNC	ENSG00000165572				195	0	0	116	16	12.1212
AKAP11	0	genome.wustl.edu	37	13	42874486	42874486	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	42874486	42874486	A	-	DEL	AKAP11	ENST00000025301	human	ensembl	74_37	+1	known	frame_shift_del	c.1604	p.N537fs	0.089	NULL	NULL	-	no_errors	AKAP11	HGNC	ENSG00000023516				67	0	0	29	13	30.9524
GTF2F2	0	genome.wustl.edu	37	13	45781540	45781540	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	45781540	45781540	T	-	DEL	GTF2F2	ENST00000494087	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GTF2F2	HGNC	ENSG00000188342				30	0	0	22	8	26.6667
THSD1	0	genome.wustl.edu	37	13	52971621	52971622	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	52971621	52971622	-	C	INS	THSD1	ENST00000258613	human	ensembl	74_37	-1	known	frame_shift_ins	c.767_766	p.V256fs	0.976:0.935	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD1	HGNC	ENSG00000136114				102	0	0	85	9	9.57447
VPS36	0	genome.wustl.edu	37	13	52999942	52999942	+	RNA	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	52999942	52999942	A	-	DEL	VPS36	ENST00000492650	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	VPS36	HGNC	ENSG00000136100				12	0	0	5	3	37.5
VPS36	0	genome.wustl.edu	37	13	53000038	53000038	+	RNA	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	53000038	53000038	A	-	DEL	VPS36	ENST00000492650	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	VPS36	HGNC	ENSG00000136100				72	0	0	41	10	19.6078
RBM26	0	genome.wustl.edu	37	13	79940859	79940860	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	13	79940859	79940860	-	G	INS	RBM26	ENST00000438724	human	ensembl	74_37	-1	known	frame_shift_ins	c.1044_1043	p.P349fs	0.999:1.000	NULL	pfam_PWI_dom,superfamily_PWI_dom,smart_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM26	HGNC	ENSG00000139746				75	0	0	68	8	10.5263
OR4L1	0	genome.wustl.edu	37	14	20528881	20528881	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	20528881	20528881	A	-	DEL	OR4L1	ENST00000315683	human	ensembl	74_37	+1	known	frame_shift_del	c.678	p.K228fs	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR4L1	HGNC	ENSG00000176246				176	1	0.564972	125	12	8.75912
ENSG00000258908	0	genome.wustl.edu	37	14	20943125	20943125	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	20943125	20943125	T	-	DEL	ENSG00000258908	ENST00000554678	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-203M5.8	Clone_based_vega_gene	ENSG00000258908				94	0	0	50	9	15.2542
CDH24	0	genome.wustl.edu	37	14	23517514	23517514	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	23517514	23517514	G	-	DEL	CDH24	ENST00000267383	human	ensembl	74_37	-1	known	frame_shift_del	c.2135	p.P712fs	0.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH24	HGNC	ENSG00000139880				139	0	0	74	30	28.8462
EFS	0	genome.wustl.edu	37	14	23829042	23829042	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	23829042	23829042	G	-	DEL	EFS	ENST00000216733	human	ensembl	74_37	-1	known	frame_shift_del	c.645	p.I216fs	0.822	NULL	pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	EFS	HGNC	ENSG00000100842				148	0	0	103	15	12.7119
STXBP6	0	genome.wustl.edu	37	14	25288406	25288408	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	25288406	25288408	AGG	-	DEL	STXBP6	ENST00000548369	human	ensembl	74_37	-1	known	in_frame_del	c.140_138	p.L47in_frame_del	0.643:0.000:0.000	NULL	pfam_Synaptobrevin,pfscan_Synaptobrevin	-	no_errors	STXBP6	HGNC	ENSG00000168952				127	0	0	84	8	8.69565
ARHGAP5	0	genome.wustl.edu	37	14	32562544	32562545	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	32562544	32562545	-	T	INS	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	frame_shift_ins	c.2669_2670	p.E893fs	1.000:0.999	NULL	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852				90	0	0	54	8	12.9032
C14orf28	0	genome.wustl.edu	37	14	45369723	45369724	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	45369723	45369724	-	GG	INS	C14orf28	ENST00000325192	human	ensembl	74_37	+1	known	frame_shift_ins	c.85_86	p.V33fs	1.000:1.000	NULL	NULL	-	no_errors	C14orf28	HGNC	ENSG00000179476				112	0	0	82	6	6.81818
NIN	0	genome.wustl.edu	37	14	51237236	51237236	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	51237236	51237236	T	-	DEL	NIN	ENST00000245441	human	ensembl	74_37	-1	known	frame_shift_del	c.1304	p.N435fs	0.975	NULL	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503				130	0	0	102	7	6.42202
SOCS4	0	genome.wustl.edu	37	14	55509878	55509879	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	55509878	55509879	-	A	INS	SOCS4	ENST00000339298	human	ensembl	74_37	+1	known	frame_shift_ins	c.119_120	p.S43fs	0.997:0.413	NULL	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS4	HGNC	ENSG00000180008				123	0	0	100	19	15.9664
FBXO34	0	genome.wustl.edu	37	14	55818555	55818555	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	55818555	55818555	T	-	DEL	FBXO34	ENST00000313833	human	ensembl	74_37	+1	known	frame_shift_del	c.1447	p.L485fs	0.997	NULL	superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO34	HGNC	ENSG00000178974				156	1	0.636943	95	18	15.9292
KTN1	0	genome.wustl.edu	37	14	56119760	56119761	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	56119760	56119761	-	A	INS	KTN1	ENST00000395309	human	ensembl	74_37	+1	known	frame_shift_ins	c.2720_2721	p.A909fs	0.998:0.923	NULL	NULL	-	no_errors	KTN1	HGNC	ENSG00000126777				98	0	0	62	13	17.3333
SYNE2	0	genome.wustl.edu	37	14	64494437	64494437	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	64494437	64494437	A	-	DEL	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	frame_shift_del	c.6640	p.N2215fs	1.000	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				77	0	0	68	13	16.0494
ZBTB1	0	genome.wustl.edu	37	14	64989787	64989787	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	64989787	64989787	A	-	DEL	ZBTB1	ENST00000394712	human	ensembl	74_37	+1	known	frame_shift_del	c.1565	p.K524fs	0.222	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB1	HGNC	ENSG00000126804				228	0	0	183	37	16.8182
HSPA2	0	genome.wustl.edu	37	14	65007975	65007975	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	65007975	65007975	G	-	DEL	HSPA2	ENST00000247207	human	ensembl	74_37	+1	known	frame_shift_del	c.408	p.G138fs	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC	ENSG00000126803				75	0	0	55	11	16.6667
HSPA2	0	genome.wustl.edu	37	14	65008766	65008766	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	65008766	65008766	C	-	DEL	HSPA2	ENST00000247207	human	ensembl	74_37	+1	known	frame_shift_del	c.1199	p.P401fs	1.000	pfam_Hsp_70_fam,prints_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC	ENSG00000126803				135	0	0	97	8	7.61905
FUT8	0	genome.wustl.edu	37	14	66190982	66190983	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	66190982	66190983	-	A	INS	FUT8	ENST00000360689	human	ensembl	74_37	+1	known	frame_shift_ins	c.1200_1201	p.R402fs	1.000:1.000	pirsf_Alpha1_6FUT_euk	superfamily_SH3_domain,smart_SH3_domain,pirsf_Alpha1_6FUT_euk	-	no_errors	FUT8	HGNC	ENSG00000033170				83	0	0	52	14	21.2121
ENSG00000221060	0	genome.wustl.edu	37	14	70270922	70270922	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	14	70270922	70270922	T	-	DEL	ENSG00000221060	ENST00000408133	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors	SNORA11	RFAM	ENSG00000221060				15	0	0	10	4	28.5714
LOC101927079	0	genome.wustl.edu	37	15	22332412	22332413	+	RNA	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	22332412	22332413	-	A	INS	LOC101927079	ENST00000558896	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.686:0.693	-	-	-	no_errors	RP11-69H14.6	Clone_based_vega_gene	ENSG00000259176				84	0	0	59	7	10.6061
HERC2	0	genome.wustl.edu	37	15	28483908	28483908	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	28483908	28483908	A	-	DEL	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	frame_shift_del	c.3588	p.F1196fs	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				85	0	0	57	12	17.3913
BUB1B	0	genome.wustl.edu	37	15	40512768	40512768	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	40512768	40512768	A	-	DEL	BUB1B	ENST00000412359	human	ensembl	74_37	+1	known	frame_shift_del	c.3003	p.D1003fs	0.976	NULL	pfam_Mad3_BUB1_I,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Mad3_BUB1_I	-	no_errors	BUB1B	HGNC	ENSG00000156970				137	0	0	103	18	14.876
TTBK2	0	genome.wustl.edu	37	15	43044744	43044745	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	43044744	43044745	-	A	INS	TTBK2	ENST00000267890	human	ensembl	74_37	-1	known	frame_shift_ins	c.2700_2699	p.L900fs	1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK2	HGNC	ENSG00000128881				149	1	0.666667	71	18	20.2247
TP53BP1	0	genome.wustl.edu	37	15	43733757	43733757	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	43733757	43733757	T	-	DEL	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	frame_shift_del	c.3065	p.N1022fs	1.000	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369				167	0	0	138	21	13.2075
SLC12A1	0	genome.wustl.edu	37	15	48543854	48543854	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	48543854	48543854	T	-	DEL	SLC12A1	ENST00000380993	human	ensembl	74_37	+1	known	frame_shift_del	c.1829	p.F611fs	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt2,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A1	HGNC	ENSG00000074803				48	0	0	38	8	17.3913
ENSG00000259241	0	genome.wustl.edu	37	15	51987960	51987962	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	51987960	51987962	AAA	-	DEL	ENSG00000259241	ENST00000559918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006:0.012:0.011	-	-	-	no_errors	RP11-313P18.2	Clone_based_vega_gene	ENSG00000259241				14	0	0	9	7	43.75
PRTG	0	genome.wustl.edu	37	15	55912892	55912892	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	55912892	55912892	A	-	DEL	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	frame_shift_del	c.3167	p.F1056fs	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	PRTG	HGNC	ENSG00000166450				102	0	0	54	12	18.1818
C15orf59	0	genome.wustl.edu	37	15	74032267	74032267	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	74032267	74032267	C	-	DEL	C15orf59	ENST00000379822	human	ensembl	74_37	-1	known	frame_shift_del	c.873	p.N293fs	0.393	NULL	superfamily_Polyketide_synth_docking	-	no_errors	C15orf59	HGNC	ENSG00000205363				183	0	0	137	22	13.8365
CLK3	0	genome.wustl.edu	37	15	74919886	74919888	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	74919886	74919888	GAG	-	DEL	CLK3	ENST00000395066	human	ensembl	74_37	+1	known	in_frame_del	c.1363_1365	p.E456in_frame_del	1.000:1.000:0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CLK3	HGNC	ENSG00000179335				170	0	0	90	27	23.0769
SCAPER	0	genome.wustl.edu	37	15	76995242	76995242	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	76995242	76995242	G	-	DEL	SCAPER	ENST00000324767	human	ensembl	74_37	-1	known	frame_shift_del	c.2349	p.K784fs	1.000	NULL	smart_Znf_U1	-	no_errors	SCAPER	HGNC	ENSG00000140386				178	0	0	144	11	7.09677
LOC645752	0	genome.wustl.edu	37	15	78217339	78217339	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	78217339	78217339	T	-	DEL	LOC645752	ENST00000567226	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-114H24.2	Clone_based_vega_gene	ENSG00000260776				97	0	0	68	11	13.9241
NGRN	0	genome.wustl.edu	37	15	90809018	90809018	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	90809018	90809018	G	-	DEL	NGRN	ENST00000379095	human	ensembl	74_37	+1	known	frame_shift_del	c.74	p.V27fs	0.247	NULL	pfam_Neugrin-related	-	no_errors	NGRN	HGNC	ENSG00000182768				53	0	0	38	5	11.6279
BLM	0	genome.wustl.edu	37	15	91347484	91347484	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	91347484	91347484	A	-	DEL	BLM	ENST00000355112	human	ensembl	74_37	+1	known	frame_shift_del	c.3646	p.K1217fs	0.999	pfam_HRDC_dom,superfamily_HRDC-like,smart_HRDC_dom,pfscan_HRDC_dom	pfam_RQC_domain,pfam_BDHCT,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_HRDC-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	BLM	HGNC	ENSG00000197299				131	0	0	134	8	5.6338
IGF1R	0	genome.wustl.edu	37	15	99467855	99467856	+	Frame_Shift_Ins	INS	-	-	TC			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	15	99467855	99467856	-	TC	INS	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	frame_shift_ins	c.2724_2725	p.G911fs	0.870:1.000	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443				146	0	0	92	8	8
GSPT1	0	genome.wustl.edu	37	16	11969760	11969760	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	11969760	11969760	T	-	DEL	GSPT1	ENST00000434724	human	ensembl	74_37	-1	known	frame_shift_del	c.1719	p.K573fs	1.000	pfam_Transl_elong_EFTu/EF1A_C,superfamily_Transl_elong_EF1A/Init_IF2_C	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,pfam_Ataxin-2_C,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom	-	no_errors	GSPT1	HGNC	ENSG00000103342				55	0	0	34	7	17.0732
CACNA1H	0	genome.wustl.edu	37	16	1270496	1270496	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	1270496	1270496	C	-	DEL	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	frame_shift_del	c.6564	p.C2191fs	0.999	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557				110	0	0	56	7	11.1111
PTX4	0	genome.wustl.edu	37	16	1536186	1536186	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	1536186	1536186	G	-	DEL	PTX4	ENST00000447419	human	ensembl	74_37	-1	known	frame_shift_del	c.1191	p.G398fs	0.011	pfam_Pentaxin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	pfam_Pentaxin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	PTX4	HGNC	ENSG00000251692				59	0	0	37	8	17.7778
NDUFB10	0	genome.wustl.edu	37	16	2009662	2009662	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	2009662	2009662	C	-	DEL	NDUFB10	ENST00000268668	human	ensembl	74_37	+1	known	frame_shift_del	c.37	p.P14fs	1.000	NULL	pfam_NADH_UbQ_OxRdtase_su10	-	no_errors	NDUFB10	HGNC	ENSG00000140990				48	0	0	34	7	17.0732
INO80E	0	genome.wustl.edu	37	16	30007664	30007665	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	30007664	30007665	-	A	INS	INO80E	ENST00000563197	human	ensembl	74_37	+1	known	frame_shift_ins	c.33_34	p.Y14fs	1.000:1.000	NULL	NULL	-	no_errors	INO80E	HGNC	ENSG00000169592				16	0	0	9	2	18.1818
HCFC1R1	0	genome.wustl.edu	37	16	3073266	3073266	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	3073266	3073266	G	-	DEL	HCFC1R1	ENST00000248089	human	ensembl	74_37	-1	known	frame_shift_del	c.249	p.M84fs	0.001	NULL	NULL	-	no_errors	HCFC1R1	HGNC	ENSG00000103145				104	0	0	81	22	21.3592
PHKG2	0	genome.wustl.edu	37	16	30768016	30768017	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	30768016	30768017	-	C	INS	PHKG2	ENST00000563588	human	ensembl	74_37	+1	known	frame_shift_ins	c.907_908	p.R305fs	0.760:0.756	superfamily_Kinase-like_dom,prints_Phosph_kin_gamma	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Phosph_kin_gamma,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PHKG2	HGNC	ENSG00000156873				193	0	0	120	12	9.09091
PHKB	0	genome.wustl.edu	37	16	47684785	47684785	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	47684785	47684785	A	-	DEL	PHKB	ENST00000299167	human	ensembl	74_37	+1	known	frame_shift_del	c.1924	p.G644fs	1.000	pfam_Glyco_hydro_15	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKB	HGNC	ENSG00000102893				133	0	0	108	21	16.2791
APRT	0	genome.wustl.edu	37	16	88876126	88876128	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	88876126	88876128	AGA	-	DEL	APRT	ENST00000378364	human	ensembl	74_37	-1	known	in_frame_del	c.523_521	p.F174in_frame_del	1.000:1.000:1.000	tigrfam_Ade_phspho_trans	pfam_PRibTrfase_dom,tigrfam_Ade_phspho_trans	-	no_errors	APRT	HGNC	ENSG00000198931				148	0	0	82	9	9.89011
ANKRD11	0	genome.wustl.edu	37	16	89349838	89349838	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	89349838	89349838	T	-	DEL	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	frame_shift_del	c.3112	p.S1038fs	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522				167	0	0	116	24	17.1429
TUBB3	0	genome.wustl.edu	37	16	90001671	90001671	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	16	90001671	90001671	C	-	DEL	TUBB3	ENST00000315491	human	ensembl	74_37	+1	known	frame_shift_del	c.812	p.L273fs	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB3	Uniprot_gn	ENSG00000258947				140	0	0	100	8	7.40741
EPN2	0	genome.wustl.edu	37	17	19232950	19232950	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	19232950	19232950	A	-	DEL	EPN2	ENST00000314728	human	ensembl	74_37	+1	known	frame_shift_del	c.1401	p.T470fs	1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN2	HGNC	ENSG00000072134				103	0	0	77	12	13.4831
ULK2	0	genome.wustl.edu	37	17	19729489	19729489	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	19729489	19729489	A	-	DEL	ULK2	ENST00000361658	human	ensembl	74_37	-1	known	frame_shift_del	c.798	p.F266fs	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser/Thr_kinase_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK2	HGNC	ENSG00000083290				118	0	0	90	11	10.8911
SPECC1	0	genome.wustl.edu	37	17	20108263	20108263	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	20108263	20108263	A	-	DEL	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	frame_shift_del	c.901	p.N303fs	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487				153	1	0.649351	112	15	11.811
PAFAH1B1	0	genome.wustl.edu	37	17	2579802	2579802	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	2579802	2579802	A	-	DEL	PAFAH1B1	ENST00000397195	human	ensembl	74_37	+1	known	frame_shift_del	c.904	p.S304fs	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Dynein_regulator_LIS1,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pirsf_Dynein_regulator_LIS1,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PAFAH1B1	HGNC	ENSG00000007168				84	0	0	71	18	20.2247
LGALS9	0	genome.wustl.edu	37	17	25958317	25958320	+	Frame_Shift_Del	DEL	CCTA	CCTA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CCTA	CCTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	25958317	25958320	CCTA	-	DEL	LGALS9	ENST00000395473	human	ensembl	74_37	+1	known	frame_shift_del	c.26_29	p.Y10fs	0.016:0.009:0.014:0.012	superfamily_ConA-like_lec_gl_sf	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS9	HGNC	ENSG00000168961				99	0	0	72	6	7.69231
C17orf97	0	genome.wustl.edu	37	17	263498	263498	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	263498	263498	C	-	DEL	C17orf97	ENST00000360127	human	ensembl	74_37	+1	known	frame_shift_del	c.864	p.E290fs	0.003	NULL	NULL	-	no_errors	C17orf97	HGNC	ENSG00000187624				87	0	0	50	9	15.2542
NLK	0	genome.wustl.edu	37	17	26449740	26449740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	26449740	26449740	T	-	DEL	NLK	ENST00000407008	human	ensembl	74_37	+1	known	frame_shift_del	c.570	p.F192fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NLK	HGNC	ENSG00000087095				105	0	0	67	23	25.5556
PHF12	0	genome.wustl.edu	37	17	27253876	27253877	+	RNA	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	27253876	27253877	-	G	INS	PHF12	ENST00000483934	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	PHF12	HGNC	ENSG00000109118				11	0	0	6	2	25
ENSG00000265289	0	genome.wustl.edu	37	17	28386482	28386482	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	28386482	28386482	T	-	DEL	ENSG00000265289	ENST00000583250	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC104984.4	Clone_based_vega_gene	ENSG00000265289				47	0	0	36	5	12.1951
TEFM	0	genome.wustl.edu	37	17	29226626	29226626	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	29226626	29226626	T	-	DEL	TEFM	ENST00000581216	human	ensembl	74_37	-1	known	splice_site_del	c.646-2	e4-2	0.977	-	-	-	no_errors	TEFM	HGNC	ENSG00000172171				66	0	0	57	8	12.3077
SLFN5	0	genome.wustl.edu	37	17	33592319	33592319	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	33592319	33592319	C	-	DEL	SLFN5	ENST00000299977	human	ensembl	74_37	+1	known	frame_shift_del	c.2088	p.P698fs	0.820	superfamily_P-loop_NTPase	pfam_ATPase_AAA-4,pfam_DUF2075,superfamily_P-loop_NTPase	-	no_errors	SLFN5	HGNC	ENSG00000166750				122	0	0	72	17	19.1011
GGNBP2	0	genome.wustl.edu	37	17	34937904	34937905	+	Frame_Shift_Ins	INS	-	-	GT			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	34937904	34937905	-	GT	INS	GGNBP2	ENST00000304718	human	ensembl	74_37	+1	known	frame_shift_ins	c.1151_1152	p.C388fs	0.999:1.000	NULL	NULL	-	no_errors	GGNBP2	HGNC	ENSG00000005955				100	0	0	78	6	7.14286
GSDMB	0	genome.wustl.edu	37	17	38065270	38065270	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	38065270	38065270	G	-	DEL	GSDMB	ENST00000360317	human	ensembl	74_37	-1	known	frame_shift_del	c.602	p.P201fs	0.000	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMB	HGNC	ENSG00000073605				228	0	0	171	9	5
KRT24	0	genome.wustl.edu	37	17	38855801	38855801	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	38855801	38855801	C	-	DEL	KRT24	ENST00000264651	human	ensembl	74_37	-1	known	frame_shift_del	c.1256	p.G419fs	0.038	pfam_IF,prints_Keratin_I	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT24	HGNC	ENSG00000167916				250	0	0	234	13	5.26316
STAT5A	0	genome.wustl.edu	37	17	40453398	40453399	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	40453398	40453399	-	C	INS	STAT5A	ENST00000345506	human	ensembl	74_37	+1	known	frame_shift_ins	c.1095_1096	p.Q367fs	1.000:1.000	pfam_STAT_TF_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5A	HGNC	ENSG00000126561				135	0	0	97	14	12.6126
EZH1	0	genome.wustl.edu	37	17	40879741	40879742	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	40879741	40879742	-	T	INS	EZH1	ENST00000428826	human	ensembl	74_37	-1	known	frame_shift_ins	c.158_157	p.T53fs	0.989:0.998	pfam_EZH2_WD-Binding	pfam_SET_dom,pfam_EZH2_WD-Binding,superfamily_Homeodomain-like,smart_SANT/Myb,smart_SET_dom,pfscan_SET_dom	-	no_errors	EZH1	HGNC	ENSG00000108799				134	0	0	92	8	8
WNK4	0	genome.wustl.edu	37	17	40932962	40932962	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	40932962	40932962	C	-	DEL	WNK4	ENST00000246914	human	ensembl	74_37	+1	known	frame_shift_del	c.246	p.D85fs	0.824	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK4	HGNC	ENSG00000126562				72	0	0	63	7	10
PLEKHM1	0	genome.wustl.edu	37	17	43531274	43531274	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	43531274	43531274	G	-	DEL	PLEKHM1	ENST00000430334	human	ensembl	74_37	-1	known	frame_shift_del	c.1944	p.E649fs	0.000	NULL	pfam_Run,superfamily_Znf_FYVE_PHD,smart_Run,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Pleckstrin_homology,pfscan_Run,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PLEKHM1	HGNC	ENSG00000225190				109	0	0	89	15	14.4231
NFE2L1	0	genome.wustl.edu	37	17	46128958	46128959	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	46128958	46128959	-	C	INS	NFE2L1	ENST00000362042	human	ensembl	74_37	+1	known	frame_shift_ins	c.478_479	p.V163fs	1.000:1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L1	HGNC	ENSG00000082641				142	0	0	128	14	9.85915
HOXB7	0	genome.wustl.edu	37	17	46685097	46685098	+	RNA	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	46685097	46685098	-	T	INS	HOXB7	ENST00000567101	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.002	-	-	-	no_errors	HOXB7	HGNC	ENSG00000260027				24	0	0	12	3	20
ABCC3	0	genome.wustl.edu	37	17	48735469	48735471	+	In_Frame_Del	DEL	CAC	CAC	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CAC	CAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	48735469	48735471	CAC	-	DEL	ABCC3	ENST00000285238	human	ensembl	74_37	+1	known	in_frame_del	c.513_515	p.T173in_frame_del	1.000:1.000:1.000	tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC3	HGNC	ENSG00000108846				166	0	0	131	10	7.0922
RNF43	0	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	56435161	56435161	C	-	DEL	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	frame_shift_del	c.1976	p.G659fs	0.900	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375				277	1	0.359712	172	28	14
PRKCA	0	genome.wustl.edu	37	17	64298959	64298960	+	RNA	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	64298959	64298960	-	G	INS	PRKCA	ENST00000583361	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014:0.092	-	-	-	no_errors	PRKCA	HGNC	ENSG00000154229				27	0	0	12	4	25
PHF23	0	genome.wustl.edu	37	17	7139748	7139748	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	7139748	7139748	G	-	DEL	PHF23	ENST00000320316	human	ensembl	74_37	-1	known	frame_shift_del	c.498	p.V167fs	0.918	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD	-	no_errors	PHF23	HGNC	ENSG00000040633				128	0	0	72	18	20
NEURL4	0	genome.wustl.edu	37	17	7230925	7230926	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	7230925	7230926	-	G	INS	NEURL4	ENST00000399464	human	ensembl	74_37	-1	known	frame_shift_ins	c.561_560	p.R188fs	0.003:0.082	superfamily_ConA-like_lec_gl_sf,pfscan_Neu_Z	pfam_Neu_Z,superfamily_ConA-like_lec_gl_sf,smart_Neu_Z,pfscan_Neu_Z	-	no_errors	NEURL4	HGNC	ENSG00000215041				102	0	0	80	11	12.0879
WRAP53	0	genome.wustl.edu	37	17	7606722	7606722	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	17	7606722	7606722	C	-	DEL	WRAP53	ENST00000316024	human	ensembl	74_37	+1	known	frame_shift_del	c.1565	p.A522fs	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WRAP53	HGNC	ENSG00000141499				115	0	0	82	17	17.1717
ROCK1	0	genome.wustl.edu	37	18	18533679	18533679	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	18533679	18533679	T	-	DEL	ROCK1	ENST00000399799	human	ensembl	74_37	-1	known	frame_shift_del	c.3921	p.K1307fs	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Pleckstrin_homology	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Rho-bd_dom,pfam_HR1_rho-bd,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	ROCK1	HGNC	ENSG00000067900				141	1	0.704225	133	9	6.33803
EMILIN2	0	genome.wustl.edu	37	18	2913410	2913410	+	RNA	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	2913410	2913410	G	-	DEL	EMILIN2	ENST00000308080	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EMILIN2	HGNC	ENSG00000132205				40	0	0	39	5	11.3636
SETBP1	0	genome.wustl.edu	37	18	42643610	42643610	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	42643610	42643610	A	-	DEL	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	frame_shift_del	c.4738	p.A1581fs	1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217				27	0	0	16	8	33.3333
TCEB3B	0	genome.wustl.edu	37	18	44559425	44559426	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	44559425	44559426	-	T	INS	TCEB3B	ENST00000332567	human	ensembl	74_37	-1	known	frame_shift_ins	c.2211_2210	p.L738fs	0.000:0.002	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3B	HGNC	ENSG00000206181				232	0	0	176	15	7.8534
EPB41L3	0	genome.wustl.edu	37	18	5433504	5433504	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	5433504	5433504	T	-	DEL	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	frame_shift_del	c.876	p.K292fs	0.730	pirsf_Band_41_protein,pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397				41	0	0	26	6	18.75
LMAN1	0	genome.wustl.edu	37	18	57013285	57013285	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	57013285	57013285	T	-	DEL	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	splice_site_del	c.823-2	e8-2	1.000	-	-	-	no_errors	LMAN1	HGNC	ENSG00000074695				135	1	0.735294	71	42	37.1681
KIAA1468	0	genome.wustl.edu	37	18	59966066	59966066	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	59966066	59966066	A	-	DEL	KIAA1468	ENST00000256858	human	ensembl	74_37	+1	known	frame_shift_del	c.3605	p.N1203fs	1.000	NULL	pfam_HEAT,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_HEAT_type_2,pfscan_LisH_dimerisation	-	no_errors	KIAA1468	HGNC	ENSG00000134444				56	0	0	72	6	7.69231
SERPINB12	0	genome.wustl.edu	37	18	61228376	61228376	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	18	61228376	61228376	A	-	DEL	SERPINB12	ENST00000269491	human	ensembl	74_37	+1	known	frame_shift_del	c.443	p.N150fs	0.009	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB12	HGNC	ENSG00000166634				158	0	0	103	16	13.4454
DNM2	0	genome.wustl.edu	37	19	10940881	10940882	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	10940881	10940882	-	C	INS	DNM2	ENST00000314646	human	ensembl	74_37	+1	known	frame_shift_ins	c.2370_2371	p.L792fs	0.894:1.000	NULL	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM2	HGNC	ENSG00000079805				143	0	0	86	16	15.6863
CCDC151	0	genome.wustl.edu	37	19	11545825	11545827	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	11545825	11545827	GAG	-	DEL	CCDC151	ENST00000356392	human	ensembl	74_37	-1	known	in_frame_del	c.13_11	p.P4in_frame_del	0.754:0.521:0.574	NULL	NULL	-	no_errors	CCDC151	HGNC	ENSG00000198003				90	0	0	58	9	13.4328
JUNB	0	genome.wustl.edu	37	19	12902925	12902925	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	12902925	12902925	G	-	DEL	JUNB	ENST00000302754	human	ensembl	74_37	+1	known	frame_shift_del	c.340	p.G115fs	1.000	pfam_JNK	pfam_JNK,pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Jun	-	no_errors	JUNB	HGNC	ENSG00000171223				20	0	0	12	4	25
FARSA	0	genome.wustl.edu	37	19	13041102	13041103	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	13041102	13041103	-	C	INS	FARSA	ENST00000314606	human	ensembl	74_37	-1	known	frame_shift_ins	c.438_437	p.Q147fs	0.431:0.999	NULL	pfam_Phenylalanyl-tRNA_Synthase,pfam_aa-tRNA-synt_IIb_cons-dom,pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,tigrfam_Phe-tRNA-synth_IIc_asu	-	no_errors	FARSA	HGNC	ENSG00000179115				121	0	0	107	12	10.084
MPV17L2	0	genome.wustl.edu	37	19	18305818	18305819	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	18305818	18305819	-	C	INS	MPV17L2	ENST00000599612	human	ensembl	74_37	+1	known	frame_shift_ins	c.486_487	p.Q164fs	1.000:1.000	pfam_Mpv17_PMP22	pfam_Mpv17_PMP22	-	no_errors	MPV17L2	HGNC	ENSG00000254858				152	0	0	114	19	14.2857
KIAA1683	0	genome.wustl.edu	37	19	18368676	18368676	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	18368676	18368676	C	-	DEL	KIAA1683	ENST00000392413	human	ensembl	74_37	-1	known	frame_shift_del	c.3418	p.A1140fs	0.352	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	KIAA1683	HGNC	ENSG00000130518				116	0	0	78	29	27.1028
AMH	0	genome.wustl.edu	37	19	2249534	2249534	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	2249534	2249534	C	-	DEL	AMH	ENST00000221496	human	ensembl	74_37	+1	known	frame_shift_del	c.203	p.L70fs	0.000	pirsf_Muellerian-inhibiting_factor	pfam_AMH_N,pfam_TGF-b_C,smart_TGF-b_C,pirsf_Muellerian-inhibiting_factor	-	no_errors	AMH	HGNC	ENSG00000104899				20	0	0	13	3	18.75
KMT2B	0	genome.wustl.edu	37	19	36210764	36210764	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	36210764	36210764	C	-	DEL	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_del	c.515	p.P174fs	0.976	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				144	0	0	103	18	14.876
KMT2B	0	genome.wustl.edu	37	19	36216189	36216189	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	36216189	36216189	C	-	DEL	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_del	c.3597	p.P1201fs	0.130	pirsf_MeTrfase_trithorax,superfamily_Znf_FYVE_PHD,pfscan_Znf_PHD-finger	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				45	0	0	32	5	13.5135
ARHGAP33	0	genome.wustl.edu	37	19	36279197	36279198	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	36279197	36279198	-	G	INS	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	frame_shift_ins	c.3730_3731	p.E1247fs	0.606:0.488	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777				44	0	0	24	4	14.2857
KIRREL2	0	genome.wustl.edu	37	19	36357214	36357214	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	36357214	36357214	C	-	DEL	KIRREL2	ENST00000360202	human	ensembl	74_37	+1	known	frame_shift_del	c.1947	p.C652fs	0.003	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL2	HGNC	ENSG00000126259				157	1	0.632911	89	28	23.9316
SIPA1L3	0	genome.wustl.edu	37	19	38573183	38573183	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	38573183	38573183	C	-	DEL	SIPA1L3	ENST00000222345	human	ensembl	74_37	+1	known	frame_shift_del	c.978	p.P328fs	0.983	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L3	HGNC	ENSG00000105738				54	0	0	41	7	14.5833
CAPN12	0	genome.wustl.edu	37	19	39230770	39230773	+	Frame_Shift_Del	DEL	AGAT	AGAT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AGAT	AGAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	39230770	39230773	AGAT	-	DEL	CAPN12	ENST00000328867	human	ensembl	74_37	-1	known	frame_shift_del	c.650_647	p.Y216fs	1.000:1.000:1.000:1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN12	HGNC	ENSG00000182472				49	0	0	37	6	13.9535
IFNL3	0	genome.wustl.edu	37	19	39734465	39734465	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	39734465	39734465	T	-	DEL	IFNL3	ENST00000413851	human	ensembl	74_37	-1	known	frame_shift_del	c.491	p.K164fs	0.297	NULL	NULL	-	no_errors	IFNL3	HGNC	ENSG00000197110				110	0	0	98	12	10.9091
PIAS4	0	genome.wustl.edu	37	19	4013139	4013139	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	4013139	4013139	C	-	DEL	PIAS4	ENST00000262971	human	ensembl	74_37	+1	known	frame_shift_del	c.246	p.L84fs	0.781	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS4	HGNC	ENSG00000105229				137	0	0	94	9	8.73786
DYRK1B	0	genome.wustl.edu	37	19	40316563	40316563	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	40316563	40316563	G	-	DEL	DYRK1B	ENST00000323039	human	ensembl	74_37	-1	known	frame_shift_del	c.1682	p.P561fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1B	HGNC	ENSG00000105204				113	0	0	75	17	18.4783
CYP2A13	0	genome.wustl.edu	37	19	41594939	41594941	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	41594939	41594941	GAG	-	DEL	CYP2A13	ENST00000330436	human	ensembl	74_37	+1	known	in_frame_del	c.286_288	p.E97in_frame_del	1.000:1.000:1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A13	HGNC	ENSG00000197838				169	0	0	105	9	7.89474
LMTK3	0	genome.wustl.edu	37	19	49000731	49000732	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	49000731	49000732	-	G	INS	LMTK3	ENST00000270238	human	ensembl	74_37	-1	known	frame_shift_ins	c.3682_3681	p.K1227fs	0.985:0.998	smart_Ser/Thr_dual-sp_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC	ENSG00000142235				97	0	0	88	7	7.36842
TRPM4	0	genome.wustl.edu	37	19	49692275	49692275	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	49692275	49692275	G	-	DEL	TRPM4	ENST00000252826	human	ensembl	74_37	+1	known	frame_shift_del	c.1946	p.D651fs	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM4	HGNC	ENSG00000130529				174	0	0	146	10	6.41026
TEAD2	0	genome.wustl.edu	37	19	49850473	49850473	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	49850473	49850473	G	-	DEL	TEAD2	ENST00000311227	human	ensembl	74_37	-1	known	frame_shift_del	c.883	p.H295fs	0.961	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD2	HGNC	ENSG00000074219				383	1	0.260417	273	51	15.7407
TSKS	0	genome.wustl.edu	37	19	50243063	50243064	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	50243063	50243064	-	G	INS	TSKS	ENST00000246801	human	ensembl	74_37	-1	known	frame_shift_ins	c.1749_1748	p.Q585fs	0.998:1.000	NULL	NULL	-	no_errors	TSKS	HGNC	ENSG00000126467				154	0	0	121	20	14.1844
SIGLEC9	0	genome.wustl.edu	37	19	51631276	51631278	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	51631276	51631278	CTT	-	DEL	SIGLEC9	ENST00000440804	human	ensembl	74_37	+1	known	in_frame_del	c.1086_1088	p.F363in_frame_del	0.000:0.000:0.004	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	SIGLEC9	HGNC	ENSG00000129450				196	0	0	165	25	13.1579
SIGLEC10	0	genome.wustl.edu	37	19	51918605	51918605	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	51918605	51918605	G	-	DEL	SIGLEC10	ENST00000339313	human	ensembl	74_37	-1	known	frame_shift_del	c.1160	p.P387fs	0.122	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC10	HGNC	ENSG00000142512				70	0	0	68	7	9.33333
LILRB1	0	genome.wustl.edu	37	19	55148384	55148385	+	RNA	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	55148384	55148385	-	C	INS	LILRB1	ENST00000462628	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	LILRB1	HGNC	ENSG00000104972				47	0	0	31	7	18.4211
PTPRH	0	genome.wustl.edu	37	19	55716887	55716887	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	55716887	55716887	G	-	DEL	PTPRH	ENST00000376350	human	ensembl	74_37	-1	known	frame_shift_del	c.426	p.D143fs	0.001	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRH	HGNC	ENSG00000080031				128	0	0	82	22	21.1538
SAFB2	0	genome.wustl.edu	37	19	5595419	5595420	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	5595419	5595420	CT	-	DEL	SAFB2	ENST00000252542	human	ensembl	74_37	-1	known	frame_shift_del	c.1872_1871	p.E624fs	1.000:1.000	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254				85	0	0	67	13	16.25
ENSG00000267865	0	genome.wustl.edu	37	19	56220431	56220431	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	56220431	56220431	T	-	DEL	ENSG00000267865	ENST00000596293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2611O12.8	Clone_based_vega_gene	ENSG00000267865				39	0	0	35	7	16.6667
FUT6	0	genome.wustl.edu	37	19	5832408	5832408	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	5832408	5832408	G	-	DEL	FUT6	ENST00000592563	human	ensembl	74_37	-1	known	frame_shift_del	c.171	p.A58fs	0.000	pfam_Glyco_trans_10	pfam_Glyco_trans_10	-	no_errors	FUT6	HGNC	ENSG00000156413				81	0	0	50	9	15.2542
MUC16	0	genome.wustl.edu	37	19	9049103	9049103	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	19	9049103	9049103	A	-	DEL	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	frame_shift_del	c.32528	p.F10843fs	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				154	0	0	110	18	14.0625
SLC9A2	0	genome.wustl.edu	37	2	103324746	103324746	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	103324746	103324746	C	-	DEL	SLC9A2	ENST00000233969	human	ensembl	74_37	+1	known	frame_shift_del	c.2237	p.P748fs	0.000	prints_Na/H_exchanger_2	pfam_Cation/H_exchanger,prints_Na/H_exchanger_2,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A2	HGNC	ENSG00000115616				252	1	0.395257	187	24	11.3744
SULT1C3	0	genome.wustl.edu	37	2	108863685	108863685	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	108863685	108863685	A	-	DEL	SULT1C3	ENST00000329106	human	ensembl	74_37	+1	known	frame_shift_del	c.35	p.K14fs	0.001	superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT1C3	HGNC	ENSG00000196228				129	0	0	81	24	22.8571
MIR1302-3	0	genome.wustl.edu	37	2	114340578	114340578	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	114340578	114340578	T	-	DEL	MIR1302-3	ENST00000408128	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	MIR1302-3	HGNC	ENSG00000221055				140	0	0	92	19	17.1171
ZRANB3	0	genome.wustl.edu	37	2	135988440	135988440	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	135988440	135988440	T	-	DEL	ZRANB3	ENST00000264159	human	ensembl	74_37	-1	known	frame_shift_del	c.1597	p.R533fs	0.015	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_HNH,pfam_Znf_RanBP2,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Znf_RanBP2,smart_HNH_nuc,pfscan_Znf_RanBP2,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ZRANB3	HGNC	ENSG00000121988				68	0	0	60	8	11.7647
ACVR2A	0	genome.wustl.edu	37	2	148657041	148657041	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	148657041	148657041	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.278	p.D96fs	1.000	pfam_Activin_rcpt,prints_TGFB_receptor	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				128	0	0	90	23	20.354
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				152	1	0.653595	109	31	22.1429
ORC4	0	genome.wustl.edu	37	2	148712917	148712917	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	148712917	148712917	T	-	DEL	ORC4	ENST00000264169	human	ensembl	74_37	-1	known	frame_shift_del	c.435	p.G146fs	0.998	pfam_ATPase_AAA_core,pfam_ATPase_dom_prok,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_ORC4	pfam_ATPase_AAA_core,pfam_ATPase_dom_prok,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_ORC4	-	no_errors	ORC4	HGNC	ENSG00000115947				35	0	0	26	6	18.75
EPC2	0	genome.wustl.edu	37	2	149447829	149447829	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	149447829	149447829	A	-	DEL	EPC2	ENST00000258484	human	ensembl	74_37	+1	known	frame_shift_del	c.200	p.E70fs	1.000	pfam_Enhancer_polycomb-like_N	pfam_Enhancer_polycomb_C,pfam_Enhancer_polycomb-like_N	-	no_errors	EPC2	HGNC	ENSG00000135999				85	0	0	70	9	11.3924
CCDC148	0	genome.wustl.edu	37	2	159077217	159077217	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	159077217	159077217	T	-	DEL	CCDC148	ENST00000283233	human	ensembl	74_37	-1	known	frame_shift_del	c.1260	p.K420fs	1.000	NULL	NULL	-	no_errors	CCDC148	HGNC	ENSG00000153237				29	0	0	13	3	18.75
FIGN	0	genome.wustl.edu	37	2	164467489	164467489	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	164467489	164467489	G	-	DEL	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	frame_shift_del	c.853	p.L285fs	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263				98	0	0	59	9	13.2353
DCAF17	0	genome.wustl.edu	37	2	172300086	172300086	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	172300086	172300086	A	-	DEL	DCAF17	ENST00000375255	human	ensembl	74_37	+1	known	frame_shift_del	c.284	p.I97fs	1.000	NULL	NULL	-	no_errors	DCAF17	HGNC	ENSG00000115827				111	0	0	78	11	12.3596
DYNC1I2	0	genome.wustl.edu	37	2	172549339	172549339	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	172549339	172549339	A	-	DEL	DYNC1I2	ENST00000397119	human	ensembl	74_37	+1	known	frame_shift_del	c.161	p.R57fs	1.000	NULL	pfam_Dynein_IC_1/2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DYNC1I2	HGNC	ENSG00000077380				27	0	0	22	5	18.5185
COL3A1	0	genome.wustl.edu	37	2	189855752	189855752	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	189855752	189855752	A	-	DEL	COL3A1	ENST00000304636	human	ensembl	74_37	+1	known	frame_shift_del	c.821	p.K275fs	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL3A1	HGNC	ENSG00000168542				180	0	0	161	28	14.8148
PLCL1	0	genome.wustl.edu	37	2	198948749	198948749	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	198948749	198948749	A	-	DEL	PLCL1	ENST00000428675	human	ensembl	74_37	+1	known	frame_shift_del	c.508	p.N171fs	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL1	HGNC	ENSG00000115896				168	0	0	131	7	5.07246
NOP58	0	genome.wustl.edu	37	2	203168133	203168133	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	203168133	203168133	A	-	DEL	NOP58	ENST00000264279	human	ensembl	74_37	+1	known	frame_shift_del	c.1564	p.K524fs	1.000	NULL	pfam_Nop_dom,pfam_NOSIC,pfam_NOP5_N,smart_NOSIC	-	no_errors	NOP58	HGNC	ENSG00000055044				65	0	0	41	6	12.766
BMPR2	0	genome.wustl.edu	37	2	203420130	203420130	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	203420130	203420130	A	-	DEL	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	frame_shift_del	c.1742	p.N583fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217				112	0	0	67	8	10.6667
PARD3B	0	genome.wustl.edu	37	2	206166298	206166298	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	206166298	206166298	A	-	DEL	PARD3B	ENST00000406610	human	ensembl	74_37	+1	known	frame_shift_del	c.2503	p.T837fs	0.996	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3B	HGNC	ENSG00000116117				117	0	0	53	9	14.5161
CRYGB	0	genome.wustl.edu	37	2	209010499	209010499	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	209010499	209010499	G	-	DEL	CRYGB	ENST00000260988	human	ensembl	74_37	-1	known	frame_shift_del	c.251	p.P84fs	0.011	superfamily_G_crystallin-rel	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,prints_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	-	no_errors	CRYGB	HGNC	ENSG00000182187				166	0	0	116	21	15.3285
ABCA12	0	genome.wustl.edu	37	2	215843156	215843156	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	215843156	215843156	T	-	DEL	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	frame_shift_del	c.5012	p.N1671fs	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452				43	0	0	30	8	21.0526
CCDC108	0	genome.wustl.edu	37	2	219892687	219892687	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	219892687	219892687	G	-	DEL	CCDC108	ENST00000341552	human	ensembl	74_37	-1	known	frame_shift_del	c.1896	p.M633fs	1.000	NULL	superfamily_PapD-like,pfscan_MSP_dom	-	no_errors	CCDC108	HGNC	ENSG00000181378				180	0	0	158	28	15.0538
OBSL1	0	genome.wustl.edu	37	2	220416424	220416424	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	220416424	220416424	C	-	DEL	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	frame_shift_del	c.5510	p.G1837fs	0.018	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006				33	0	0	39	10	20.4082
SP140	0	genome.wustl.edu	37	2	231159025	231159025	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	231159025	231159025	A	-	DEL	SP140	ENST00000392045	human	ensembl	74_37	+1	known	frame_shift_del	c.2008	p.K672fs	0.001	NULL	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom,pfscan_Bromodomain	-	no_errors	SP140	HGNC	ENSG00000079263				68	0	0	45	5	10
DGKD	0	genome.wustl.edu	37	2	234365951	234365952	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	234365951	234365952	-	G	INS	DGKD	ENST00000264057	human	ensembl	74_37	+1	known	frame_shift_ins	c.2557_2558	p.T856fs	1.000:1.000	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,pfam_Pleckstrin_homology,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKD	HGNC	ENSG00000077044				113	0	0	100	7	6.54206
SCLY	0	genome.wustl.edu	37	2	238976762	238976762	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	238976762	238976762	G	-	DEL	SCLY	ENST00000254663	human	ensembl	74_37	+1	known	frame_shift_del	c.283	p.K97fs	0.489	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Cysteine_dSase_NifS	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Cysteine_dSase_NifS	-	no_errors	SCLY	HGNC	ENSG00000132330				73	0	0	53	6	10.1695
HDAC4	0	genome.wustl.edu	37	2	240002823	240002823	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	240002823	240002823	G	-	DEL	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	frame_shift_del	c.2703	p.M902fs	1.000	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024				56	0	0	37	5	11.9048
ANKMY1	0	genome.wustl.edu	37	2	241420369	241420369	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	241420369	241420369	C	-	DEL	ANKMY1	ENST00000272972	human	ensembl	74_37	-1	known	frame_shift_del	c.2764	p.D922fs	0.000	NULL	pfam_Ankyrin_rpt,pfam_MORN,pfam_Znf_MYND,superfamily_Ankyrin_rpt-contain_dom,smart_MORN,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_MYND	-	no_errors	ANKMY1	HGNC	ENSG00000144504				165	0	0	122	8	6.15385
ADCY3	0	genome.wustl.edu	37	2	25141477	25141477	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	25141477	25141477	T	-	DEL	ADCY3	ENST00000260600	human	ensembl	74_37	-1	known	frame_shift_del	c.380	p.K127fs	1.000	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY3	HGNC	ENSG00000138031				120	0	0	81	17	17.3469
ASXL2	0	genome.wustl.edu	37	2	25966872	25966873	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	25966872	25966873	-	G	INS	ASXL2	ENST00000435504	human	ensembl	74_37	-1	known	frame_shift_ins	c.2334_2333	p.V779fs	0.999:1.000	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL2	HGNC	ENSG00000143970				151	0	0	83	12	12.6316
ACP1	0	genome.wustl.edu	37	2	277054	277054	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	277054	277054	A	-	DEL	ACP1	ENST00000272065	human	ensembl	74_37	+1	known	frame_shift_del	c.368	p.K124fs	0.993	pfam_Ptyr_pPase_SF,superfamily_Ptyr_pPase_SF,smart_Ptyr_pPase_SF,prints_Tyr_Pase_low_mol_wt_mml	pfam_Ptyr_pPase_SF,superfamily_Ptyr_pPase_SF,smart_Ptyr_pPase_SF,prints_Tyr_Pase_low_mol_wt_mml,prints_Tyr_phospatase/Ars_reductase	-	no_errors	ACP1	HGNC	ENSG00000143727				101	0	0	79	13	14.1304
FAM98A	0	genome.wustl.edu	37	2	33813524	33813525	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	33813524	33813525	-	T	INS	FAM98A	ENST00000238823	human	ensembl	74_37	-1	known	frame_shift_ins	c.400_399	p.A133fs	1.000:1.000	pfam_Uncharacterised_FAM98	pfam_Uncharacterised_FAM98	-	no_errors	FAM98A	HGNC	ENSG00000119812				131	0	0	77	8	9.41176
LRPPRC	0	genome.wustl.edu	37	2	44145165	44145165	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	44145165	44145165	T	-	DEL	LRPPRC	ENST00000260665	human	ensembl	74_37	-1	known	frame_shift_del	c.3147	p.A1051fs	0.844	NULL	pfam_Pentatricopeptide_repeat,tigrfam_Pentatricopeptide_repeat	-	no_errors	LRPPRC	HGNC	ENSG00000138095				41	0	0	19	7	26.9231
MSH6	0	genome.wustl.edu	37	2	48030640	48030640	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	48030640	48030640	C	-	DEL	MSH6	ENST00000234420	human	ensembl	74_37	+1	known	frame_shift_del	c.3254	p.F1088fs	0.003	pfam_DNA_mismatch_repair_MutS_C,superfamily_P-loop_NTPase,smart_DNA_mismatch_repair_MutS_core,pirsf_DNA_mismatch_repair_Msh6	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_core,pfam_PWWP_dom,pfam_DNA_mismatch_repair_MutS_clamp,pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_PWWP_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_Msh6,pfscan_PWWP_dom	-	no_errors	MSH6	HGNC	ENSG00000116062				73	0	0	73	14	16.092
PSME4	0	genome.wustl.edu	37	2	54093345	54093345	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	54093345	54093345	T	-	DEL	PSME4	ENST00000404125	human	ensembl	74_37	-1	known	frame_shift_del	c.5413	p.T1805fs	1.000	pfam_DUF3437,superfamily_ARM-type_fold	pfam_DUF3437,superfamily_ARM-type_fold	-	no_errors	PSME4	HGNC	ENSG00000068878				179	0	0	116	30	20.5479
VRK2	0	genome.wustl.edu	37	2	58373509	58373509	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	58373509	58373509	A	-	DEL	VRK2	ENST00000340157	human	ensembl	74_37	+1	known	frame_shift_del	c.1082	p.V364fs	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	VRK2	HGNC	ENSG00000028116				101	0	0	58	10	14.7059
SNRNP27	0	genome.wustl.edu	37	2	70131463	70131463	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	70131463	70131463	T	-	DEL	SNRNP27	ENST00000409116	human	ensembl	74_37	+1	novel	frame_shift_del	c.426	p.S145fs	0.141	NULL	pfam_DUF1777	-	no_errors	SNRNP27	HGNC	ENSG00000124380				59	0	0	39	11	22
ATP6V1B1	0	genome.wustl.edu	37	2	71191573	71191573	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	71191573	71191573	C	-	DEL	ATP6V1B1	ENST00000234396	human	ensembl	74_37	+1	known	frame_shift_del	c.1149	p.I386fs	0.999	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,superfamily_P-loop_NTPase,tigrfam_ATPase_V1-cplx_bsu	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,pfam_ATPase_F1/V1/A1-cplx_a/bsu_C,pfam_ATPase_F1_a/bsu_N,superfamily_P-loop_NTPase,superfamily_ATPase_F1_a/bsu_N,superfamily_ATPase_F1/V1/A1-cplx_a/bsu_C,tigrfam_ATPase_V1-cplx_bsu	-	no_errors	ATP6V1B1	HGNC	ENSG00000116039				113	0	0	69	12	14.8148
TET3	0	genome.wustl.edu	37	2	74274174	74274174	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	74274174	74274174	C	-	DEL	TET3	ENST00000409262	human	ensembl	74_37	+1	known	frame_shift_del	c.725	p.Q244fs	0.957	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605				71	0	0	64	15	18.9873
EIF5B	0	genome.wustl.edu	37	2	99976805	99976805	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	2	99976805	99976805	A	-	DEL	EIF5B	ENST00000289371	human	ensembl	74_37	+1	known	frame_shift_del	c.142	p.K50fs	1.000	NULL	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_TIF_IF2_dom3,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417				44	0	0	18	4	18.1818
ESF1	0	genome.wustl.edu	37	20	13763492	13763492	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	13763492	13763492	T	-	DEL	ESF1	ENST00000202816	human	ensembl	74_37	-1	known	frame_shift_del	c.295	p.T99fs	0.000	NULL	pfam_NUC153	-	no_errors	ESF1	HGNC	ENSG00000089048				40	0	0	19	13	40.625
C20orf194	0	genome.wustl.edu	37	20	3321211	3321212	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	3321211	3321212	-	A	INS	C20orf194	ENST00000252032	human	ensembl	74_37	-1	known	frame_shift_ins	c.921_920	p.S309fs	1.000:1.000	NULL	NULL	-	no_errors	C20orf194	HGNC	ENSG00000088854				78	0	0	66	12	15.3846
L3MBTL1	0	genome.wustl.edu	37	20	42162927	42162927	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	42162927	42162927	C	-	DEL	L3MBTL1	ENST00000418998	human	ensembl	74_37	+1	known	frame_shift_del	c.1537	p.P514fs	0.999	smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513				93	0	0	58	12	17.1429
PIGT	0	genome.wustl.edu	37	20	44050026	44050026	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	44050026	44050026	C	-	DEL	PIGT	ENST00000279036	human	ensembl	74_37	+1	known	frame_shift_del	c.1037	p.P348fs	0.666	pfam_PIG-T	pfam_PIG-T	-	no_errors	PIGT	HGNC	ENSG00000124155				47	0	0	38	8	17.3913
SYCP2	0	genome.wustl.edu	37	20	58467047	58467047	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	58467047	58467047	T	-	DEL	SYCP2	ENST00000357552	human	ensembl	74_37	-1	known	frame_shift_del	c.2362	p.M788fs	0.029	NULL	NULL	-	no_errors	SYCP2	HGNC	ENSG00000196074				54	0	0	46	12	20.6897
LRRN4	0	genome.wustl.edu	37	20	6021714	6021714	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	20	6021714	6021714	T	-	DEL	LRRN4	ENST00000378858	human	ensembl	74_37	-1	known	frame_shift_del	c.2177	p.N726fs	1.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LRRN4	HGNC	ENSG00000125872				80	0	0	61	8	11.5942
WRB	0	genome.wustl.edu	37	21	40768975	40768975	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	40768975	40768975	T	-	DEL	WRB	ENST00000466787	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WRB	HGNC	ENSG00000182093				18	0	0	6	5	45.4545
PDE9A	0	genome.wustl.edu	37	21	44195538	44195540	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	21	44195538	44195540	AAA	-	DEL	PDE9A	ENST00000460989	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	PDE9A	HGNC	ENSG00000160191				24	0	0	13	9	40.9091
MED15	0	genome.wustl.edu	37	22	20939157	20939157	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	20939157	20939157	C	-	DEL	MED15	ENST00000263205	human	ensembl	74_37	+1	known	frame_shift_del	c.1819	p.P608fs	1.000	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917				93	0	0	72	10	12.1951
MPST	0	genome.wustl.edu	37	22	37425539	37425539	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	37425539	37425539	G	-	DEL	MPST	ENST00000397129	human	ensembl	74_37	+1	known	frame_shift_del	c.938	p.K315fs	0.928	NULL	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	-	no_errors	MPST	HGNC	ENSG00000128309				30	0	0	19	4	17.3913
SREBF2	0	genome.wustl.edu	37	22	42289201	42289201	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	42289201	42289201	C	-	DEL	SREBF2	ENST00000361204	human	ensembl	74_37	+1	known	frame_shift_del	c.2289	p.L765fs	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SREBF2	HGNC	ENSG00000198911				121	0	0	83	22	20.9524
MCAT	0	genome.wustl.edu	37	22	43529199	43529199	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	22	43529199	43529199	C	-	DEL	MCAT	ENST00000290429	human	ensembl	74_37	-1	known	frame_shift_del	c.1023	p.F342fs	0.005	superfamily_Acyl_Trfase/lysoPLipase,smart_PKS_acyl_transferase	pfam_Acyl_transferase,superfamily_Acyl_Trfase/lysoPLipase,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_acyl_transferase	-	no_errors	MCAT	HGNC	ENSG00000100294				447	0	0	298	55	15.5807
ZBTB20	0	genome.wustl.edu	37	3	114058003	114058003	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	114058003	114058003	G	-	DEL	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	frame_shift_del	c.2075	p.P692fs	0.678	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				107	0	0	68	11	13.9241
GTF2E1	0	genome.wustl.edu	37	3	120489634	120489634	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	120489634	120489634	A	-	DEL	GTF2E1	ENST00000283875	human	ensembl	74_37	+1	known	frame_shift_del	c.508	p.D172fs	1.000	pfam_Znf_TFIIB,smart_TFIIE_asu	pfam_TFIIEa/SarR/Rpc3_HTH_dom,pfam_TFIIE_asu_C,pfam_Znf_TFIIB,smart_TFIIE_asu	-	no_errors	GTF2E1	HGNC	ENSG00000153767				291	1	0.342466	200	50	20
EAF2	0	genome.wustl.edu	37	3	121573659	121573659	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	121573659	121573659	A	-	DEL	EAF2	ENST00000273668	human	ensembl	74_37	+1	known	frame_shift_del	c.327	p.T112fs	0.970	pfam_Tscrpt_elong_fac_Eaf_N	pfam_Tscrpt_elong_fac_Eaf_N	-	no_errors	EAF2	HGNC	ENSG00000145088				112	0	0	75	16	17.5824
KALRN	0	genome.wustl.edu	37	3	124438200	124438200	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	124438200	124438200	C	-	DEL	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	frame_shift_del	c.8844	p.L2950fs	0.998	superfamily_Kinase-like_dom	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145				94	0	0	67	11	14.1026
TRA2B	0	genome.wustl.edu	37	3	185641779	185641779	+	RNA	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	185641779	185641779	A	-	DEL	TRA2B	ENST00000465245	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TRA2B	HGNC	ENSG00000136527				61	0	0	47	14	22.9508
SGOL1	0	genome.wustl.edu	37	3	20216050	20216050	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	20216050	20216050	T	-	DEL	SGOL1	ENST00000263753	human	ensembl	74_37	-1	known	frame_shift_del	c.973	p.M325fs	0.000	NULL	pfam_Shugoshin_N,pfam_Shugoshin_C	-	no_errors	SGOL1	HGNC	ENSG00000129810				55	0	0	31	8	20.5128
DCLK3	0	genome.wustl.edu	37	3	36779713	36779714	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	36779713	36779714	-	CT	INS	DCLK3	ENST00000416516	human	ensembl	74_37	-1	known	frame_shift_ins	c.438_437	p.E147fs	0.001:0.006	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK3	HGNC	ENSG00000163673				240	0	0	173	11	5.97826
ACAA1	0	genome.wustl.edu	37	3	38167143	38167143	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	38167143	38167143	C	-	DEL	ACAA1	ENST00000333167	human	ensembl	74_37	-1	known	frame_shift_del	c.1112	p.G371fs	1.000	pfam_Thiolase_C,pfam_ACP_syn_III_C,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,pfam_ACP_syn_III_C,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAA1	HGNC	ENSG00000060971				128	0	0	98	17	14.7826
NKTR	0	genome.wustl.edu	37	3	42679035	42679036	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	42679035	42679036	-	C	INS	NKTR	ENST00000232978	human	ensembl	74_37	+1	known	frame_shift_ins	c.1839_1840	p.S616fs	0.992:1.000	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	NKTR	HGNC	ENSG00000114857				226	1	0.440529	164	29	15.0259
RBM5	0	genome.wustl.edu	37	3	50150940	50150942	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	50150940	50150942	AGA	-	DEL	RBM5	ENST00000347869	human	ensembl	74_37	+1	known	in_frame_del	c.1580_1582	p.K529in_frame_del	1.000:1.000:1.000	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM5	HGNC	ENSG00000003756				93	0	0	59	13	18.0556
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				65	0	0	35	8	18.6047
STAB1	0	genome.wustl.edu	37	3	52543930	52543930	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	52543930	52543930	G	-	DEL	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	frame_shift_del	c.2392	p.V800fs	0.999	smart_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327				91	0	0	57	15	20.8333
ARHGEF3	0	genome.wustl.edu	37	3	56789105	56789105	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	56789105	56789105	G	-	DEL	ARHGEF3	ENST00000338458	human	ensembl	74_37	-1	known	frame_shift_del	c.375	p.S126fs	0.291	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF3	HGNC	ENSG00000163947				248	0	0	228	17	6.93878
ATXN7	0	genome.wustl.edu	37	3	63981832	63981832	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	63981832	63981832	C	-	DEL	ATXN7	ENST00000398590	human	ensembl	74_37	+1	known	frame_shift_del	c.2334	p.T781fs	0.705	NULL	pfam_SCA7_dom	-	no_errors	ATXN7	HGNC	ENSG00000163635				100	0	0	80	14	14.8936
ROBO2	0	genome.wustl.edu	37	3	77657038	77657038	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	77657038	77657038	C	-	DEL	ROBO2	ENST00000461745	human	ensembl	74_37	+1	known	frame_shift_del	c.3226	p.P1078fs	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO2	HGNC	ENSG00000185008				82	0	0	40	12	23.0769
ARPC4-TTLL3	0	genome.wustl.edu	37	3	9839414	9839416	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	3	9839414	9839416	CTC	-	DEL	ARPC4-TTLL3	ENST00000397256	human	ensembl	74_37	+1	known	in_frame_del	c.75_77	p.S27in_frame_del	1.000:1.000:1.000	pfam_ARPC4	pfam_TTL/TTLL_fam,pfam_ARPC4	-	no_errors	ARPC4-TTLL3	HGNC	ENSG00000250151				114	0	0	80	12	13.0435
PAPSS1	0	genome.wustl.edu	37	4	108578093	108578094	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	108578093	108578094	CT	-	DEL	PAPSS1	ENST00000265174	human	ensembl	74_37	-1	known	frame_shift_del	c.854_853	p.R285fs	1.000:1.000	superfamily_PUA-like_domain,tigrfam_Sulphate_adenylyltransferase	pfam_Sulfurylase_cat_dom,pfam_APS_kinase,superfamily_PUA-like_domain,superfamily_P-loop_NTPase,tigrfam_Sulphate_adenylyltransferase,tigrfam_APS_kinase	-	no_errors	PAPSS1	HGNC	ENSG00000138801				150	0	0	106	15	12.3967
PET112	0	genome.wustl.edu	37	4	152679951	152679951	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	152679951	152679951	A	-	DEL	PET112	ENST00000263985	human	ensembl	74_37	-1	known	frame_shift_del	c.300	p.F100fs	1.000	pfam_Asn/Gln-tRNA_Trfase_suB/E_cat,tigrfam_Apn/Gln-ADT_bsu	pfam_Asn/Gln-tRNA_Trfase_suB/E_cat,pfam_Asn/Gln_amidotransferase,superfamily_Asn/Gln_tRNA_amidoTrfrase-rel,smart_Asn/Gln_amidotransferase,tigrfam_Apn/Gln-ADT_bsu	-	no_errors	PET112	HGNC	ENSG00000059691				145	0	0	103	21	16.9355
FSTL5	0	genome.wustl.edu	37	4	162307153	162307153	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	162307153	162307153	T	-	DEL	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	frame_shift_del	c.2290	p.T764fs	1.000	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843				123	0	0	121	7	5.46875
DDX60	0	genome.wustl.edu	37	4	169182016	169182016	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	169182016	169182016	A	-	DEL	DDX60	ENST00000393743	human	ensembl	74_37	-1	known	frame_shift_del	c.3398	p.L1133fs	0.961	superfamily_P-loop_NTPase	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX60	HGNC	ENSG00000137628				85	0	0	75	6	7.40741
NEK1	0	genome.wustl.edu	37	4	170428203	170428203	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	170428203	170428203	T	-	DEL	NEK1	ENST00000507142	human	ensembl	74_37	-1	known	frame_shift_del	c.1992	p.V665fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK1	HGNC	ENSG00000137601				24	0	0	28	7	20
TACC3	0	genome.wustl.edu	37	4	1730308	1730308	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	1730308	1730308	C	-	DEL	TACC3	ENST00000313288	human	ensembl	74_37	+1	known	frame_shift_del	c.1179	p.M396fs	0.000	NULL	pfam_TACC	-	no_errors	TACC3	HGNC	ENSG00000013810				136	0	0	91	22	19.469
TENM3	0	genome.wustl.edu	37	4	183713573	183713573	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	183713573	183713573	C	-	DEL	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	frame_shift_del	c.5748	p.P1918fs	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336				117	0	0	51	10	16.3934
SNX25	0	genome.wustl.edu	37	4	186272695	186272695	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	186272695	186272695	A	-	DEL	SNX25	ENST00000264694	human	ensembl	74_37	+1	known	frame_shift_del	c.1906	p.N638fs	1.000	NULL	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_RGS_dom,pfam_Phox,superfamily_Regulat_G_prot_signal_superfam,superfamily_Phox,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal_superfam,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	SNX25	HGNC	ENSG00000109762				115	0	0	70	12	14.6341
HGFAC	0	genome.wustl.edu	37	4	3446132	3446132	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	3446132	3446132	C	-	DEL	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	frame_shift_del	c.693	p.F231fs	0.000	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Fibronectin_type1,smart_Fibronectin_type1,pfscan_Fibronectin_type1	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758				24	0	0	16	4	20
ZNF141	0	genome.wustl.edu	37	4	367382	367382	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	367382	367382	A	-	DEL	ZNF141	ENST00000240499	human	ensembl	74_37	+1	known	frame_shift_del	c.1156	p.I388fs	0.975	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF141	HGNC	ENSG00000131127				75	0	0	58	11	15.942
TBC1D1	0	genome.wustl.edu	37	4	38046057	38046058	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	38046057	38046058	-	A	INS	TBC1D1	ENST00000261439	human	ensembl	74_37	+1	known	frame_shift_ins	c.1488_1489	p.N497fs	1.000:1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D1	HGNC	ENSG00000065882				133	0	0	102	9	8.10811
KLF3	0	genome.wustl.edu	37	4	38691454	38691454	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	38691454	38691454	C	-	DEL	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	frame_shift_del	c.649	p.L219fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787				171	0	0	118	8	6.34921
KLF3	0	genome.wustl.edu	37	4	38691475	38691476	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	38691475	38691476	-	C	INS	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	frame_shift_ins	c.670_671	p.Q227fs	1.000:1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787				170	0	0	125	7	5.30303
EPHA5	0	genome.wustl.edu	37	4	66286254	66286255	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	66286254	66286255	-	T	INS	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	frame_shift_ins	c.1432_1431	p.G477fs	1.000:0.954	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242				77	0	0	48	13	21.3115
TIGD2	0	genome.wustl.edu	37	4	90035667	90035667	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	4	90035667	90035667	A	-	DEL	TIGD2	ENST00000317005	human	ensembl	74_37	+1	known	frame_shift_del	c.1542	p.K516fs	0.996	NULL	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD2	HGNC	ENSG00000180346				106	0	0	83	12	12.6316
PKD2L2	0	genome.wustl.edu	37	5	137260772	137260772	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	137260772	137260772	A	-	DEL	PKD2L2	ENST00000508883	human	ensembl	74_37	+1	known	frame_shift_del	c.1595	p.D534fs	0.000	NULL	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2	-	no_errors	PKD2L2	HGNC	ENSG00000078795				71	0	0	50	10	16.6667
CDC25C	0	genome.wustl.edu	37	5	137627690	137627690	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	137627690	137627690	T	-	DEL	CDC25C	ENST00000323760	human	ensembl	74_37	-1	known	frame_shift_del	c.731	p.K244fs	0.395	pfam_MPI_Phosphatase	pfam_MPI_Phosphatase,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom,prints_MPI_Phosphatase	-	no_errors	CDC25C	HGNC	ENSG00000158402				129	1	0.769231	101	16	13.6752
PCDHB5	0	genome.wustl.edu	37	5	140515436	140515436	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140515436	140515436	A	-	DEL	PCDHB5	ENST00000231134	human	ensembl	74_37	+1	known	frame_shift_del	c.420	p.I142fs	0.146	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB5	HGNC	ENSG00000113209				134	0	0	95	19	16.6667
PCDHGA12	0	genome.wustl.edu	37	5	140810686	140810688	+	In_Frame_Del	DEL	AGT	AGT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AGT	AGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	140810686	140810688	AGT	-	DEL	PCDHGA12	ENST00000252085	human	ensembl	74_37	+1	known	in_frame_del	c.360_362	p.V121in_frame_del	0.996:0.998:0.999	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA12	HGNC	ENSG00000253159				178	0	0	132	19	12.5828
ARAP3	0	genome.wustl.edu	37	5	141052865	141052866	+	RNA	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	141052865	141052866	-	C	INS	ARAP3	ENST00000524066	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	ARAP3	HGNC	ENSG00000120318				17	0	0	6	5	45.4545
TRIO	0	genome.wustl.edu	37	5	14488156	14488156	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	14488156	14488156	C	-	DEL	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	frame_shift_del	c.7419	p.S2476fs	0.021	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382				24	0	0	11	5	31.25
TCERG1	0	genome.wustl.edu	37	5	145886723	145886723	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	145886723	145886723	A	-	DEL	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	frame_shift_del	c.2863	p.K957fs	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649				140	0	0	100	25	20
PPARGC1B	0	genome.wustl.edu	37	5	149206386	149206386	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	149206386	149206386	C	-	DEL	PPARGC1B	ENST00000309241	human	ensembl	74_37	+1	known	frame_shift_del	c.403	p.S137fs	0.982	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPARGC1B	HGNC	ENSG00000155846				132	0	0	80	17	17.5258
RNF130	0	genome.wustl.edu	37	5	179382606	179382607	+	RNA	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	179382606	179382607	-	T	INS	RNF130	ENST00000520564	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	RNF130	HGNC	ENSG00000113269				99	0	0	81	7	7.95455
UGT3A2	0	genome.wustl.edu	37	5	36049012	36049012	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	36049012	36049012	T	-	DEL	UGT3A2	ENST00000282507	human	ensembl	74_37	-1	known	frame_shift_del	c.822	p.K274fs	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A2	HGNC	ENSG00000168671				129	0	0	81	16	16.4948
NIPBL	0	genome.wustl.edu	37	5	36995693	36995693	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	36995693	36995693	T	-	DEL	NIPBL	ENST00000503274	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.879	-	-	-	no_errors	NIPBL	HGNC	ENSG00000164190				43	0	0	21	10	32.2581
SNX18	0	genome.wustl.edu	37	5	53814417	53814418	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	53814417	53814418	-	A	INS	SNX18	ENST00000326277	human	ensembl	74_37	+1	known	frame_shift_ins	c.635_636	p.Q213fs	0.994:0.995	pirsf_Snx9	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX18	HGNC	ENSG00000178996				49	0	0	35	5	12.5
SREK1	0	genome.wustl.edu	37	5	65465943	65465943	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	65465943	65465943	A	-	DEL	SREK1	ENST00000334121	human	ensembl	74_37	+1	known	frame_shift_del	c.1066	p.K357fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SREK1	HGNC	ENSG00000153914				54	0	0	47	10	17.5439
PIK3R1	0	genome.wustl.edu	37	5	67592032	67592033	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	67592032	67592033	-	C	INS	PIK3R1	ENST00000396611	human	ensembl	74_37	+1	known	frame_shift_ins	c.1872_1873	p.H625fs	0.995:1.000	NULL	pfam_SH2,pfam_RhoGAP_dom,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Guanylate-bd_C,smart_SH3_domain,smart_RhoGAP_dom,smart_SH2,pfscan_SH2,pfscan_SH3_domain,pfscan_RhoGAP_dom,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R1	HGNC	ENSG00000145675				155	0	0	113	11	8.87097
BDP1	0	genome.wustl.edu	37	5	70785246	70785246	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	70785246	70785246	G	-	DEL	BDP1	ENST00000358731	human	ensembl	74_37	+1	known	frame_shift_del	c.1229	p.C410fs	0.051	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	BDP1	HGNC	ENSG00000145734				83	0	0	65	7	9.72222
MRPS27	0	genome.wustl.edu	37	5	71615931	71615932	+	RNA	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	71615931	71615932	-	A	INS	MRPS27	ENST00000523654	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.005	-	-	-	no_errors	MRPS27	HGNC	ENSG00000113048				67	0	0	49	10	16.9492
TBCA	0	genome.wustl.edu	37	5	76989051	76989051	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	76989051	76989051	A	-	DEL	TBCA	ENST00000306388	human	ensembl	74_37	-1	putative	frame_shift_del	c.286	p.S96fs	0.176	NULL	pfam_CofA_tubulin-bd,superfamily_CofA_tubulin-bd	-	no_errors	TBCA	HGNC	ENSG00000171530				22	0	0	13	6	31.5789
MSH3	0	genome.wustl.edu	37	5	79970915	79970915	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	5	79970915	79970915	A	-	DEL	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	frame_shift_del	c.1141	p.K383fs	0.982	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318				250	1	0.398406	123	78	38.806
ASCC3	0	genome.wustl.edu	37	6	101296336	101296336	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	101296336	101296336	A	-	DEL	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	frame_shift_del	c.489	p.F163fs	1.000	NULL	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249				85	0	0	61	15	19.7368
ENSG00000271730	0	genome.wustl.edu	37	6	109319968	109319969	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	109319968	109319969	AA	-	DEL	ENSG00000271730	ENST00000605885	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-787I22.3	Clone_based_vega_gene	ENSG00000271730				84	0	0	48	22	31.4286
REV3L	0	genome.wustl.edu	37	6	111672996	111672997	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	111672996	111672997	-	A	INS	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	splice_site_ins	c.7185-3_7185-2	e19-2	1.000:0.976	-	-	-	no_errors	REV3L	HGNC	ENSG00000009413				46	0	0	54	8	12.9032
REV3L	0	genome.wustl.edu	37	6	111689017	111689017	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	111689017	111689017	T	-	DEL	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	frame_shift_del	c.5974	p.I1992fs	1.000	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413				144	0	0	114	6	5
ROS1	0	genome.wustl.edu	37	6	117622204	117622205	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	117622204	117622205	-	A	INS	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	frame_shift_ins	c.6666_6665	p.N2224fs	0.602:0.390	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936				119	0	0	88	8	8.33333
ARHGAP18	0	genome.wustl.edu	37	6	129901237	129901238	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	129901237	129901238	-	A	INS	ARHGAP18	ENST00000368149	human	ensembl	74_37	-1	known	frame_shift_ins	c.1878_1877	p.L626fs	1.000:1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP18	HGNC	ENSG00000146376				68	0	0	64	8	11.1111
SYNE1	0	genome.wustl.edu	37	6	152615204	152615205	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	152615204	152615205	-	T	INS	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	frame_shift_ins	c.17741_17740	p.I5914fs	0.139:0.141	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				106	0	0	77	15	16.3043
JARID2	0	genome.wustl.edu	37	6	15496722	15496722	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	15496722	15496722	G	-	DEL	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	frame_shift_del	c.1266	p.R425fs	0.963	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				113	0	0	69	14	16.8675
PLG	0	genome.wustl.edu	37	6	161139450	161139451	+	Frame_Shift_Ins	INS	-	-	CA			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	161139450	161139451	-	CA	INS	PLG	ENST00000308192	human	ensembl	74_37	+1	known	frame_shift_ins	c.912_913	p.N307fs	1.000:1.000	pirsf_Pept_S1A_plasmin,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Pept_S1A_plasmin,pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	PLG	HGNC	ENSG00000122194				172	0	0	169	16	8.64865
PHF1	0	genome.wustl.edu	37	6	33382566	33382566	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	33382566	33382566	C	-	DEL	PHF1	ENST00000374516	human	ensembl	74_37	+1	known	frame_shift_del	c.1009	p.P338fs	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF1	HGNC	ENSG00000112511				127	0	0	108	10	8.47458
PNPLA1	0	genome.wustl.edu	37	6	36260882	36260882	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	36260882	36260882	C	-	DEL	PNPLA1	ENST00000457797	human	ensembl	74_37	+1	known	frame_shift_del	c.486	p.P164fs	0.985	superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA1	HGNC	ENSG00000180316				155	0	0	116	10	7.93651
ABCC10	0	genome.wustl.edu	37	6	43416650	43416650	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	43416650	43416650	T	-	DEL	ABCC10	ENST00000372530	human	ensembl	74_37	+1	known	frame_shift_del	c.3991	p.L1332fs	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC10	HGNC	ENSG00000124574				107	0	0	79	7	8.13953
DST	0	genome.wustl.edu	37	6	56485020	56485020	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	56485020	56485020	T	-	DEL	DST	ENST00000370765	human	ensembl	74_37	-1	known	frame_shift_del	c.3812	p.N1271fs	0.000	NULL	pfam_Plectin_repeat,pfam_Spectrin_repeat,superfamily_Ig/albumin-bd,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DST	HGNC	ENSG00000151914				56	0	0	55	11	16.6667
KIAA1586	0	genome.wustl.edu	37	6	56917909	56917909	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	56917909	56917909	A	-	DEL	KIAA1586	ENST00000370733	human	ensembl	74_37	+1	known	frame_shift_del	c.612	p.I207fs	0.018	NULL	superfamily_RNaseH-like_dom	-	no_errors	KIAA1586	HGNC	ENSG00000168116				93	0	0	60	11	15.493
RIMS1	0	genome.wustl.edu	37	6	72892075	72892075	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	72892075	72892075	G	-	DEL	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	frame_shift_del	c.901	p.V301fs	0.656	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841				80	0	0	46	9	16.3636
SLC17A5	0	genome.wustl.edu	37	6	74351590	74351590	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	74351590	74351590	A	-	DEL	SLC17A5	ENST00000355773	human	ensembl	74_37	-1	known	frame_shift_del	c.349	p.Y117fs	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A5	HGNC	ENSG00000119899				247	0	0	236	19	7.45098
TTK	0	genome.wustl.edu	37	6	80751897	80751897	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	80751897	80751897	A	-	DEL	TTK	ENST00000369798	human	ensembl	74_37	+1	known	frame_shift_del	c.2552	p.R854fs	0.102	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTK	HGNC	ENSG00000112742				84	0	0	47	11	18.9655
KIAA1009	0	genome.wustl.edu	37	6	84896232	84896233	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	84896232	84896233	-	A	INS	KIAA1009	ENST00000403245	human	ensembl	74_37	-1	known	frame_shift_ins	c.1219_1218	p.D406fs	0.000:0.000	NULL	NULL	-	no_errors	KIAA1009	HGNC	ENSG00000135315				168	0	0	137	18	11.6129
MAP3K7	0	genome.wustl.edu	37	6	91226170	91226170	+	RNA	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	6	91226170	91226170	A	-	DEL	MAP3K7	ENST00000479630	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.947	-	-	-	no_errors	MAP3K7	HGNC	ENSG00000135341				60	0	0	42	13	23.6364
PLOD3	0	genome.wustl.edu	37	7	100855927	100855927	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	100855927	100855927	G	-	DEL	PLOD3	ENST00000223127	human	ensembl	74_37	-1	known	frame_shift_del	c.889	p.R297fs	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397				96	0	0	55	7	11.2903
CUX1	0	genome.wustl.edu	37	7	101839974	101839974	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	101839974	101839974	C	-	DEL	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	frame_shift_del	c.1316	p.P441fs	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923				153	0	0	103	28	21.374
BCAP29	0	genome.wustl.edu	37	7	107258914	107258914	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	107258914	107258914	T	-	DEL	BCAP29	ENST00000379119	human	ensembl	74_37	+1	known	frame_shift_del	c.911	p.L306fs	0.000	NULL	pfam_Bap31	-	no_errors	BCAP29	HGNC	ENSG00000075790				76	0	0	28	5	15.1515
CPED1	0	genome.wustl.edu	37	7	120911387	120911388	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	120911387	120911388	-	A	INS	CPED1	ENST00000310396	human	ensembl	74_37	+1	known	frame_shift_ins	c.2771_2772	p.H927fs	1.000:1.000	NULL	NULL	-	no_errors	CPED1	HGNC	ENSG00000106034				112	0	0	74	7	8.64198
ZNF425	0	genome.wustl.edu	37	7	148809432	148809434	+	RNA	DEL	AAT	AAT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AAT	AAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	148809432	148809434	AAT	-	DEL	ZNF425	ENST00000484196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005:0.005:0.006	-	-	-	no_errors	ZNF425	HGNC	ENSG00000204947				214	0	0	131	33	20.122
XRCC2	0	genome.wustl.edu	37	7	152345759	152345760	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	152345759	152345760	-	A	INS	XRCC2	ENST00000359321	human	ensembl	74_37	-1	known	frame_shift_ins	c.811_810	p.I270fs	1.000:1.000	superfamily_P-loop_NTPase	pfam_DNA_recomb/repair_Rad51_C,superfamily_P-loop_NTPase,pfscan_DNA_recomb_RecA/RadB_ATP-bd	-	no_errors	XRCC2	HGNC	ENSG00000196584				82	0	0	46	13	22.0339
WDR60	0	genome.wustl.edu	37	7	158734830	158734830	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	158734830	158734830	C	-	DEL	WDR60	ENST00000407559	human	ensembl	74_37	+1	known	frame_shift_del	c.2993	p.N1000fs	0.120	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR60	HGNC	ENSG00000126870				100	0	0	65	8	10.9589
IGF2BP3	0	genome.wustl.edu	37	7	23385595	23385596	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	23385595	23385596	-	T	INS	IGF2BP3	ENST00000258729	human	ensembl	74_37	-1	known	frame_shift_ins	c.905_904	p.I302fs	1.000:1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,pfam_RRM_dom,smart_RRM_dom,smart_KH_dom,pfscan_KH_dom_type_1,pfscan_RRM_dom	-	no_errors	IGF2BP3	HGNC	ENSG00000136231				121	0	0	47	21	30.8824
HOXA10	0	genome.wustl.edu	37	7	27213837	27213837	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	27213837	27213837	A	-	DEL	HOXA10	ENST00000283921	human	ensembl	74_37	-1	known	frame_shift_del	c.89	p.L30fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXA10	HGNC	ENSG00000253293				157	1	0.632911	94	17	15.3153
HERPUD2	0	genome.wustl.edu	37	7	35709922	35709923	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	35709922	35709923	AT	-	DEL	HERPUD2	ENST00000311350	human	ensembl	74_37	-1	known	frame_shift_del	c.242_241	p.M81fs	1.000:1.000	pfam_Ubiquitin_dom,smart_Ubiquitin_dom	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	HERPUD2	HGNC	ENSG00000122557				83	0	0	65	7	9.72222
SDK1	0	genome.wustl.edu	37	7	4185504	4185504	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	4185504	4185504	G	-	DEL	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	frame_shift_del	c.4379	p.E1462fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				106	0	0	93	5	5.10204
DTX2P1-UPK3BP1-PMS2P11	0	genome.wustl.edu	37	7	76610355	76610356	+	RNA	INS	-	-	C			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	76610355	76610356	-	C	INS	DTX2P1-UPK3BP1-PMS2P11	ENST00000584900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.918:0.847	-	-	-	no_errors	DTX2P1-UPK3BP1-PMS2P11	HGNC	ENSG00000265479				183	1	0.543478	116	16	12.1212
AKAP9	0	genome.wustl.edu	37	7	91603085	91603085	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	91603085	91603085	A	-	DEL	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	frame_shift_del	c.145	p.K51fs	1.000	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914				64	0	0	40	12	23.0769
BAIAP2L1	0	genome.wustl.edu	37	7	97939854	97939854	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	7	97939854	97939854	G	-	DEL	BAIAP2L1	ENST00000005260	human	ensembl	74_37	-1	known	frame_shift_del	c.858	p.A287fs	0.002	NULL	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2L1	HGNC	ENSG00000006453				141	0	0	83	17	17
NACAP1	0	genome.wustl.edu	37	8	102381883	102381884	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	102381883	102381884	AA	-	DEL	NACAP1	ENST00000419462	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.879:0.891	-	-	-	no_errors	NACAP1	HGNC	ENSG00000228224				24	0	0	24	4	14.2857
UBR5	0	genome.wustl.edu	37	8	103289349	103289349	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	103289349	103289349	T	-	DEL	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	frame_shift_del	c.6360	p.E2121fs	0.987	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				148	0	0	118	13	9.92366
PKHD1L1	0	genome.wustl.edu	37	8	110476645	110476647	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	110476645	110476647	AGA	-	DEL	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	in_frame_del	c.7584_7586	p.E2529in_frame_del	0.998:1.000:1.000	superfamily_Pectin_lyase_fold/virulence,smart_PbH1	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				60	0	0	27	6	18.1818
KCNV1	0	genome.wustl.edu	37	8	110986380	110986380	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	110986380	110986380	C	-	DEL	KCNV1	ENST00000297404	human	ensembl	74_37	-1	known	frame_shift_del	c.238	p.A80fs	0.053	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv8,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv4	-	no_errors	KCNV1	HGNC	ENSG00000164794				28	0	0	21	2	8.69565
FER1L6	0	genome.wustl.edu	37	8	125033884	125033884	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	125033884	125033884	A	-	DEL	FER1L6	ENST00000399018	human	ensembl	74_37	+1	known	frame_shift_del	c.2108	p.I705fs	0.993	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,superfamily_ABC1_TM_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	FER1L6	HGNC	ENSG00000214814				143	0	0	134	17	11.2583
KCNQ3	0	genome.wustl.edu	37	8	133150233	133150233	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	133150233	133150233	T	-	DEL	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	frame_shift_del	c.1599	p.K533fs	0.715	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156				174	0	0	139	19	12.0253
PHF20L1	0	genome.wustl.edu	37	8	133823330	133823330	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	133823330	133823330	A	-	DEL	PHF20L1	ENST00000395386	human	ensembl	74_37	+1	putative	frame_shift_del	c.887	p.K298fs	1.000	pfam_DUF3776	pfam_DUF3776,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Tudor-like_plant	-	no_errors	PHF20L1	HGNC	ENSG00000129292				141	0	0	118	25	17.4825
PHF20L1	0	genome.wustl.edu	37	8	133826908	133826909	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	133826908	133826909	-	A	INS	PHF20L1	ENST00000395386	human	ensembl	74_37	+1	putative	frame_shift_ins	c.957_958	p.N321fs	1.000:1.000	NULL	pfam_DUF3776,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Tudor-like_plant	-	no_errors	PHF20L1	HGNC	ENSG00000129292				95	0	0	80	7	8.04598
FBXL6	0	genome.wustl.edu	37	8	145579697	145579697	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	145579697	145579697	G	-	DEL	FBXL6	ENST00000331890	human	ensembl	74_37	-1	known	frame_shift_del	c.1403	p.P468fs	0.000	NULL	superfamily_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp	-	no_errors	FBXL6	HGNC	ENSG00000182325				178	0	0	118	9	7.08661
PSD3	0	genome.wustl.edu	37	8	18393262	18393262	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	18393262	18393262	T	-	DEL	PSD3	ENST00000440756	human	ensembl	74_37	-1	known	frame_shift_del	c.3141	p.V1048fs	1.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	PSD3	HGNC	ENSG00000156011				125	0	0	118	10	7.8125
EGR3	0	genome.wustl.edu	37	8	22548549	22548550	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	22548549	22548550	-	G	INS	EGR3	ENST00000317216	human	ensembl	74_37	-1	known	frame_shift_ins	c.601_600	p.N200fs	1.000:0.999	NULL	pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR3	HGNC	ENSG00000179388				114	0	0	85	6	6.59341
RHOBTB2	0	genome.wustl.edu	37	8	22864476	22864476	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	22864476	22864476	C	-	DEL	RHOBTB2	ENST00000251822	human	ensembl	74_37	+1	known	frame_shift_del	c.718	p.P241fs	0.990	superfamily_BTB/POZ_fold	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB2	HGNC	ENSG00000008853				172	0	0	141	12	7.84314
DOCK5	0	genome.wustl.edu	37	8	25257429	25257429	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	25257429	25257429	T	-	DEL	DOCK5	ENST00000276440	human	ensembl	74_37	+1	known	frame_shift_del	c.4707	p.F1571fs	0.166	pfam_DOCK_C	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK5	HGNC	ENSG00000147459				33	0	0	17	8	32
TEX15	0	genome.wustl.edu	37	8	30695196	30695197	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	30695196	30695197	-	G	INS	TEX15	ENST00000256246	human	ensembl	74_37	-1	known	frame_shift_ins	c.7455_7454	p.D2486fs	0.003:0.002	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863				209	0	0	129	9	6.52174
ASPH	0	genome.wustl.edu	37	8	62588723	62588724	+	In_Frame_Ins	INS	-	-	TTC			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	8	62588723	62588724	-	TTC	INS	ASPH	ENST00000379449	human	ensembl	74_37	-1	putative	in_frame_ins	c.523_522	p.174in_frame_insE	1.000:1.000	NULL	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	ASPH	HGNC	ENSG00000198363				68	0	0	49	11	18.3333
CACNA1B	0	genome.wustl.edu	37	9	141016157	141016157	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	141016157	141016157	C	-	DEL	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	frame_shift_del	c.6729	p.L2245fs	0.987	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				91	0	0	68	9	11.6883
SLC24A2	0	genome.wustl.edu	37	9	19786765	19786766	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	19786765	19786766	-	T	INS	SLC24A2	ENST00000341998	human	ensembl	74_37	-1	known	frame_shift_ins	c.100_99	p.L33fs	1.000:1.000	NULL	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A2	HGNC	ENSG00000155886				213	0	0	162	31	16.0622
TESK1	0	genome.wustl.edu	37	9	35606843	35606843	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	35606843	35606843	G	-	DEL	TESK1	ENST00000336395	human	ensembl	74_37	+1	known	frame_shift_del	c.400	p.T136fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK1	HGNC	ENSG00000107140				106	0	0	89	15	14.4231
PRKACG	0	genome.wustl.edu	37	9	71628985	71628987	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	71628985	71628987	CTT	-	DEL	PRKACG	ENST00000377276	human	ensembl	74_37	-1	known	in_frame_del	c.24_22	p.K8in_frame_del	1.000:1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACG	HGNC	ENSG00000165059				67	0	0	48	10	17.2414
ZCCHC6	0	genome.wustl.edu	37	9	88937823	88937823	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	88937823	88937823	A	-	DEL	ZCCHC6	ENST00000375963	human	ensembl	74_37	-1	known	frame_shift_del	c.2842	p.Y948fs	1.000	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_U1,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC6	HGNC	ENSG00000083223				63	0	0	36	10	21.7391
PHF2	0	genome.wustl.edu	37	9	96422612	96422612	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	96422612	96422612	A	-	DEL	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	frame_shift_del	c.1468	p.K492fs	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				33	0	0	15	3	16.6667
ZNF169	0	genome.wustl.edu	37	9	97062695	97062695	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	9	97062695	97062695	G	-	DEL	ZNF169	ENST00000395395	human	ensembl	74_37	+1	known	frame_shift_del	c.855	p.E287fs	0.180	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF169	HGNC	ENSG00000175787				134	0	0	108	11	9.2437
CLCN4	0	genome.wustl.edu	37	X	10188763	10188763	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	10188763	10188763	C	-	DEL	CLCN4	ENST00000380833	human	ensembl	74_37	+1	known	frame_shift_del	c.2038	p.E682fs	1.000	NULL	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-4	-	no_errors	CLCN4	HGNC	ENSG00000073464				140	0	0	86	34	28.3333
USP26	0	genome.wustl.edu	37	X	132161204	132161205	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	132161204	132161205	-	A	INS	USP26	ENST00000370832	human	ensembl	74_37	-1	known	frame_shift_ins	c.1045_1044	p.K348fs	0.813:0.541	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP26	HGNC	ENSG00000134588				55	0	0	44	8	15.3846
MCF2	0	genome.wustl.edu	37	X	138678778	138678779	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	138678778	138678779	-	A	INS	MCF2	ENST00000370578	human	ensembl	74_37	-1	known	frame_shift_ins	c.2642_2641	p.C881fs	1.000:1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2	HGNC	ENSG00000101977				67	0	0	29	19	39.5833
SPANXC	0	genome.wustl.edu	37	X	140335820	140335820	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	140335820	140335820	T	-	DEL	SPANXC	ENST00000358993	human	ensembl	74_37	-1	known	frame_shift_del	c.124	p.M42fs	0.004	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXC	HGNC	ENSG00000198573				235	0	0	187	13	6.5
SSR4	0	genome.wustl.edu	37	X	153062042	153062042	+	RNA	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	153062042	153062042	G	-	DEL	SSR4	ENST00000482902	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SSR4	HGNC	ENSG00000180879				100	0	0	56	14	20
ASMTL	0	genome.wustl.edu	37	X	1546792	1546792	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	1546792	1546792	G	-	DEL	ASMTL	ENST00000381317	human	ensembl	74_37	-1	known	frame_shift_del	c.732	p.G245fs	0.002	NULL	pfam_Maf,pfam_O_MeTrfase_2,tigrfam_Maf	-	no_errors	ASMTL	HGNC	ENSG00000169093				138	0	0	106	6	5.35714
ACE2	0	genome.wustl.edu	37	X	15613095	15613095	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	15613095	15613095	A	-	DEL	ACE2	ENST00000252519	human	ensembl	74_37	-1	known	frame_shift_del	c.218	p.L73fs	0.976	pfam_Peptidase_M2	pfam_Peptidase_M2,prints_Peptidase_M2	-	no_errors	ACE2	HGNC	ENSG00000130234				169	0	0	108	16	12.9032
PDK3	0	genome.wustl.edu	37	X	24512887	24512888	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	24512887	24512888	AT	-	DEL	PDK3	ENST00000441463	human	ensembl	74_37	+1	known	frame_shift_del	c.135_136	p.M47fs	0.388:0.984	pfam_BCDHK/PDK_N,superfamily_BCDHK/PDK_N	pfam_BCDHK/PDK_N,pfam_HATPase_ATP-bd,superfamily_BCDHK/PDK_N,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pfscan_Sig_transdc_His_kinase_core	-	no_errors	PDK3	HGNC	ENSG00000067992				28	0	0	23	6	20.6897
PJA1	0	genome.wustl.edu	37	X	68382257	68382257	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	68382257	68382257	A	-	DEL	PJA1	ENST00000361478	human	ensembl	74_37	-1	known	frame_shift_del	c.825	p.F275fs	0.996	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PJA1	HGNC	ENSG00000181191				61	0	0	54	5	8.47458
TEX11	0	genome.wustl.edu	37	X	70127618	70127618	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	70127618	70127618	A	-	DEL	TEX11	ENST00000374333	human	ensembl	74_37	-1	known	frame_shift_del	c.22	p.S8fs	0.008	NULL	pfam_Meiosis_specific_SPO22,smart_TPR_repeat	-	no_errors	TEX11	HGNC	ENSG00000120498				31	0	0	15	17	53.125
PHKA1	0	genome.wustl.edu	37	X	71843096	71843096	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	71843096	71843096	A	-	DEL	PHKA1	ENST00000373539	human	ensembl	74_37	-1	known	frame_shift_del	c.1823	p.L608fs	1.000	pfam_Glyco_hydro_15	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA1	HGNC	ENSG00000067177				42	0	0	24	3	11.1111
XIST	0	genome.wustl.edu	37	X	73046080	73046080	+	RNA	DEL	T	T	-			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	73046080	73046080	T	-	DEL	XIST	ENST00000416330	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				99	0	0	28	26	48.1481
ATRX	0	genome.wustl.edu	37	X	76763771	76763772	+	RNA	INS	-	-	A			TCGA-HU-A4GN-01A-11D-A25D-08	TCGA-HU-A4GN-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	bd0249c5-ed73-4e8d-9b9e-96104b90255a	33760dd2-5baf-4630-b7dc-3f3597d6debb	X	76763771	76763772	-	A	INS	ATRX	ENST00000480283	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ATRX	HGNC	ENSG00000085224				29	0	0	14	8	36.3636
