Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
COL11A1	0	genome.wustl.edu	37	1	103453255	103453255	+	Silent	SNP	A	A	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	103453255	103453255	A	C	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	silent	c.2472	p.P824	0.378	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				100	0	0	59	5	7.8125
COL11A1	0	genome.wustl.edu	37	1	103478004	103478004	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	103478004	103478004	C	A	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.1630	p.G544C	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				25	0	0	44	3	6.38298
ACAP3	0	genome.wustl.edu	37	1	1235945	1235945	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	1235945	1235945	C	A	SNP	ACAP3	ENST00000353662	human	ensembl	74_37	-1	known	missense	c.340	p.A114S	0.974	NULL	pfam_ArfGAP,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP3	HGNC	ENSG00000131584				58	0	0	30	13	30.2326
PRAMEF1	0	genome.wustl.edu	37	1	12853478	12853478	+	Silent	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	12853478	12853478	G	T	SNP	PRAMEF1	ENST00000332296	human	ensembl	74_37	+1	known	silent	c.102	p.V34	0.000	NULL	NULL	-	no_errors	PRAMEF1	HGNC	ENSG00000116721				185	0	0	110	79	41.7989
PRAMEF2	0	genome.wustl.edu	37	1	12920109	12920109	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	12920109	12920109	C	T	SNP	PRAMEF2	ENST00000240189	human	ensembl	74_37	+1	known	silent	c.849	p.H283	0.010	NULL	NULL	-	no_errors	PRAMEF2	HGNC	ENSG00000120952				120	0	0	109	10	8.40336
PRAMEF2	0	genome.wustl.edu	37	1	12920128	12920128	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	12920128	12920128	T	C	SNP	PRAMEF2	ENST00000240189	human	ensembl	74_37	+1	known	splice_site	c.866+2	e2+2	0.083	-	-	-	no_errors	PRAMEF2	HGNC	ENSG00000120952				109	0	0	105	8	7.07965
LCE3A	0	genome.wustl.edu	37	1	152595412	152595412	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	152595412	152595412	C	T	SNP	LCE3A	ENST00000335674	human	ensembl	74_37	-1	known	silent	c.168	p.R56	0.000	NULL	NULL	-	no_errors	LCE3A	HGNC	ENSG00000185962				105	0	0	53	47	47
IL6R	0	genome.wustl.edu	37	1	154437709	154437709	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	154437709	154437709	C	T	SNP	IL6R	ENST00000368485	human	ensembl	74_37	+1	known	silent	c.1260	p.P420	0.363	NULL	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IL6R	HGNC	ENSG00000160712				90	0	0	73	37	33.6364
CD5L	0	genome.wustl.edu	37	1	157803062	157803062	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	157803062	157803062	T	A	SNP	CD5L	ENST00000368174	human	ensembl	74_37	-1	known	missense	c.959	p.Q320L	0.001	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD5L	HGNC	ENSG00000073754				105	0	0	85	41	32.5397
IGSF9	0	genome.wustl.edu	37	1	159902462	159902462	+	RNA	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	159902462	159902462	A	G	SNP	IGSF9	ENST00000493195	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.047	-	-	-	no_errors	IGSF9	HGNC	ENSG00000085552				37	0	0	16	10	38.4615
LRRC52	0	genome.wustl.edu	37	1	165533033	165533033	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	165533033	165533033	C	A	SNP	LRRC52	ENST00000294818	human	ensembl	74_37	+1	known	nonsense	c.914	p.S305*	0.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC52	HGNC	ENSG00000162763				113	0	0	99	6	5.71429
ATP1B1	0	genome.wustl.edu	37	1	169096600	169096600	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	169096600	169096600	C	T	SNP	ATP1B1	ENST00000367815	human	ensembl	74_37	+1	known	missense	c.521	p.P174L	1.000	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	-	no_errors	ATP1B1	HGNC	ENSG00000143153				82	0	0	50	38	43.1818
PTPRC	0	genome.wustl.edu	37	1	198687382	198687382	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	198687382	198687382	G	T	SNP	PTPRC	ENST00000442510	human	ensembl	74_37	+1	known	missense	c.1610	p.C537F	0.278	pirsf_Leukocyte_common_ag,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC	ENSG00000081237				39	0	0	36	5	12.1951
KIF14	0	genome.wustl.edu	37	1	200567489	200567489	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	200567489	200567489	C	T	SNP	KIF14	ENST00000367350	human	ensembl	74_37	-1	known	missense	c.2425	p.D809N	1.000	superfamily_SMAD_FHA_domain	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF14	HGNC	ENSG00000118193				64	0	0	39	33	45.8333
ADORA1	0	genome.wustl.edu	37	1	203134855	203134855	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	203134855	203134855	A	C	SNP	ADORA1	ENST00000309502	human	ensembl	74_37	+1	known	missense	c.808	p.T270P	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adenosn_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adenosn_rcpt,prints_GPCR_Rhodpsn,prints_Adeno_A1_rcpt	-	no_errors	ADORA1	HGNC	ENSG00000163485				148	0	0	73	44	37.6068
LRRN2	0	genome.wustl.edu	37	1	204588700	204588700	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	204588700	204588700	C	G	SNP	LRRN2	ENST00000367175	human	ensembl	74_37	-1	known	missense	c.421	p.A141P	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRN2	HGNC	ENSG00000170382				253	0	0	70	46	39.6552
MARK1	0	genome.wustl.edu	37	1	220835358	220835358	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	220835358	220835358	C	T	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	silent	c.2238	p.D746	0.997	superfamily_KA1/Ssp2_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141				115	0	0	26	50	65.7895
HSPG2	0	genome.wustl.edu	37	1	22199882	22199882	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	22199882	22199882	C	G	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.3779	p.G1260A	1.000	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				284	0	0	61	22	26.506
OBSCN	0	genome.wustl.edu	37	1	228432152	228432152	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	228432152	228432152	G	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.3361	p.G1121C	0.008	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				136	0	0	74	13	14.9425
OBSCN	0	genome.wustl.edu	37	1	228434292	228434292	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	228434292	228434292	C	G	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.3821	p.A1274G	0.014	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				171	0	0	49	31	38.75
LYST	0	genome.wustl.edu	37	1	235973152	235973152	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	235973152	235973152	C	A	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	missense	c.966	p.L322F	0.998	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669				30	0	0	42	4	8.69565
RYR2	0	genome.wustl.edu	37	1	237947996	237947996	+	Silent	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	237947996	237947996	A	G	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.13002	p.A4334	0.005	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				99	0	0	54	5	8.47458
HMGN2	0	genome.wustl.edu	37	1	26801762	26801762	+	RNA	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	26801762	26801762	G	T	SNP	HMGN2	ENST00000460563	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HMGN2	HGNC	ENSG00000198830				16	0	0	5	8	61.5385
ENSG00000230615	0	genome.wustl.edu	37	1	44569334	44569334	+	RNA	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	44569334	44569334	C	T	SNP	ENSG00000230615	ENST00000434244	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP5-1198O20.4	Clone_based_vega_gene	ENSG00000230615				145	0	0	41	37	47.4359
ELAVL4	0	genome.wustl.edu	37	1	50659454	50659454	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	50659454	50659454	G	A	SNP	ELAVL4	ENST00000371821	human	ensembl	74_37	+1	known	silent	c.387	p.P129	0.955	pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL4	HGNC	ENSG00000162374				108	0	0	60	37	38.1443
PODN	0	genome.wustl.edu	37	1	53544373	53544373	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	53544373	53544373	C	T	SNP	PODN	ENST00000312553	human	ensembl	74_37	+1	known	silent	c.1335	p.R445	0.742	NULL	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PODN	HGNC	ENSG00000174348				281	0	0	74	52	41.2698
LEPR	0	genome.wustl.edu	37	1	66085680	66085680	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	66085680	66085680	C	A	SNP	LEPR	ENST00000349533	human	ensembl	74_37	+1	known	missense	c.2465	p.P822Q	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_IgC2-like_lig-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LEPR	HGNC	ENSG00000116678				25	0	0	40	6	13.0435
GBP1	0	genome.wustl.edu	37	1	89523769	89523769	+	Silent	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	89523769	89523769	G	T	SNP	GBP1	ENST00000370473	human	ensembl	74_37	-1	known	silent	c.780	p.P260	0.873	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP1	HGNC	ENSG00000117228				234	0	0	220	25	10.2041
SLC2A7	0	genome.wustl.edu	37	1	9063464	9063464	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	9063464	9063464	G	A	SNP	SLC2A7	ENST00000400906	human	ensembl	74_37	-1	known	silent	c.1434	p.N478	0.983	pfam_Sub_transporter	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A7	HGNC	ENSG00000197241				94	0	0	78	5	6.0241
GFI1	0	genome.wustl.edu	37	1	92949026	92949026	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	92949026	92949026	C	T	SNP	GFI1	ENST00000294702	human	ensembl	74_37	-1	known	missense	c.19	p.V7I	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GFI1	HGNC	ENSG00000162676				37	0	0	16	8	33.3333
AGRN	0	genome.wustl.edu	37	1	978821	978821	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	978821	978821	G	A	SNP	AGRN	ENST00000379370	human	ensembl	74_37	+1	known	silent	c.1587	p.A529	0.000	pfam_Kazal_dom,smart_Kazal_dom	pfam_Laminin_G,pfam_Agrin_NtA,pfam_Kazal_dom,pfam_EGF_laminin,pfam_SEA_dom,pfam_EG-like_dom,superfamily_TIMP-like_OB-fold,superfamily_ConA-like_lec_gl_sf,smart_FacI_MAC,smart_Fol_N,smart_Kazal_dom,smart_EG-like_dom,smart_EGF_laminin,smart_SEA_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Agrin_NtA,pfscan_SEA_dom	-	no_errors	AGRN	HGNC	ENSG00000188157				27	0	0	14	9	39.1304
NFKB2	0	genome.wustl.edu	37	10	104160223	104160223	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	104160223	104160223	G	T	SNP	NFKB2	ENST00000369966	human	ensembl	74_37	+1	known	missense	c.1773	p.Q591H	0.437	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_RHD,pfam_Ankyrin_rpt,pfam_Death_domain,superfamily_p53-like_TF_DNA-bd,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ig_E-set,superfamily_DEATH-like_dom,smart_IPT,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_RHD,prints_NF_Rel_Dor,prints_Ankyrin_rpt	-	no_errors	NFKB2	HGNC	ENSG00000077150				37	0	0	24	6	20
SORCS1	0	genome.wustl.edu	37	10	108923844	108923844	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	108923844	108923844	C	T	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	silent	c.441	p.P147	1.000	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018				94	0	0	30	29	49.1525
USP6NL	0	genome.wustl.edu	37	10	11505340	11505340	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	11505340	11505340	G	A	SNP	USP6NL	ENST00000379237	human	ensembl	74_37	-1	known	silent	c.1656	p.N552	0.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	USP6NL	HGNC	ENSG00000148429				227	0	0	118	43	26.7081
PNLIPRP3	0	genome.wustl.edu	37	10	118196292	118196292	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	118196292	118196292	C	T	SNP	PNLIPRP3	ENST00000369230	human	ensembl	74_37	+1	known	missense	c.119	p.T40I	0.003	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase,prints_Lipase_panc	-	no_errors	PNLIPRP3	HGNC	ENSG00000203837				85	0	0	66	36	35.2941
SEC23IP	0	genome.wustl.edu	37	10	121652327	121652327	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	121652327	121652327	C	T	SNP	SEC23IP	ENST00000369075	human	ensembl	74_37	+1	known	silent	c.33	p.G11	0.893	NULL	pfam_DDHD,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_DDHD	-	no_errors	SEC23IP	HGNC	ENSG00000107651				29	0	0	24	4	14.2857
DMBT1	0	genome.wustl.edu	37	10	124390531	124390531	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	124390531	124390531	G	A	SNP	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	missense	c.5693	p.R1898H	0.994	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908				46	0	0	27	16	37.2093
FOXI2	0	genome.wustl.edu	37	10	129536928	129536928	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	129536928	129536928	C	T	SNP	FOXI2	ENST00000388920	human	ensembl	74_37	+1	known	missense	c.656	p.A219V	0.001	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXI2	HGNC	ENSG00000186766				13	0	0	6	6	50
MPP7	0	genome.wustl.edu	37	10	28347495	28347495	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	28347495	28347495	C	T	SNP	MPP7	ENST00000337532	human	ensembl	74_37	-1	known	missense	c.1336	p.G446S	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_PDZ,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like,prints_SH3_domain	-	no_errors	MPP7	HGNC	ENSG00000150054				135	0	0	109	59	35.119
RBP3	0	genome.wustl.edu	37	10	48389994	48389994	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	48389994	48389994	G	A	SNP	RBP3	ENST00000224600	human	ensembl	74_37	-1	known	missense	c.884	p.T295M	0.225	pfam_Interphotoreceptor_retinol-bd,smart_Interphotoreceptor_retinol-bd	pfam_Interphotoreceptor_retinol-bd,pfam_Interphotorcpt_retinol-bd_N,smart_Interphotoreceptor_retinol-bd	-	no_errors	RBP3	HGNC	ENSG00000107618				54	0	0	23	30	56.6038
DKK1	0	genome.wustl.edu	37	10	54074279	54074279	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	54074279	54074279	G	T	SNP	DKK1	ENST00000373970	human	ensembl	74_37	+1	known	missense	c.85	p.V29L	0.002	NULL	pfam_Dickkopf_N	-	no_errors	DKK1	HGNC	ENSG00000107984				110	0	0	108	8	6.89655
EXOSC1	0	genome.wustl.edu	37	10	99196963	99196963	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	10	99196963	99196963	C	T	SNP	EXOSC1	ENST00000370902	human	ensembl	74_37	-1	known	missense	c.466	p.A156T	1.000	NULL	pfam_EXOSC1,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1	-	no_errors	EXOSC1	HGNC	ENSG00000171311				232	1	0.429185	115	8	6.50407
CASP4	0	genome.wustl.edu	37	11	104825729	104825729	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	104825729	104825729	C	T	SNP	CASP4	ENST00000444739	human	ensembl	74_37	-1	known	splice_site	c.8-1	e2-1	0.756	-	-	-	no_errors	CASP4	HGNC	ENSG00000196954				69	0	0	69	9	11.5385
DIXDC1	0	genome.wustl.edu	37	11	111835363	111835363	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	111835363	111835363	C	T	SNP	DIXDC1	ENST00000440460	human	ensembl	74_37	+1	known	missense	c.151	p.R51W	1.000	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_DIX,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_DIX,pfscan_CH-domain,pfscan_DIX	-	no_errors	DIXDC1	HGNC	ENSG00000150764				35	0	0	5	6	54.5455
ANKK1	0	genome.wustl.edu	37	11	113270344	113270344	+	Silent	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	113270344	113270344	G	C	SNP	ANKK1	ENST00000303941	human	ensembl	74_37	+1	known	silent	c.1653	p.A551	0.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	ANKK1	HGNC	ENSG00000170209				25	0	0	6	5	45.4545
ANKK1	0	genome.wustl.edu	37	11	113270418	113270418	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	113270418	113270418	G	T	SNP	ANKK1	ENST00000303941	human	ensembl	74_37	+1	known	missense	c.1727	p.C576F	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	ANKK1	HGNC	ENSG00000170209				21	0	0	10	4	28.5714
MFRP	0	genome.wustl.edu	37	11	119216153	119216153	+	Silent	SNP	A	A	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	119216153	119216153	A	T	SNP	MFRP	ENST00000449574	human	ensembl	74_37	-1	known	silent	c.618	p.P206	0.075	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Frizzled_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Frizzled_dom,pfscan_CUB_dom,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	MFRP	HGNC	ENSG00000235718				89	0	0	27	12	30.7692
OR6M1	0	genome.wustl.edu	37	11	123676313	123676313	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	123676313	123676313	G	T	SNP	OR6M1	ENST00000309154	human	ensembl	74_37	-1	known	missense	c.745	p.H249N	0.008	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6M1	HGNC	ENSG00000196099				68	0	0	68	10	12.8205
ST3GAL4	0	genome.wustl.edu	37	11	126277484	126277484	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	126277484	126277484	G	A	SNP	ST3GAL4	ENST00000356132	human	ensembl	74_37	+1	known	missense	c.314	p.R105Q	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST3GAL4	HGNC	ENSG00000110080				329	0	0	94	39	29.3233
NTM	0	genome.wustl.edu	37	11	132177584	132177584	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	132177584	132177584	G	A	SNP	NTM	ENST00000539799	human	ensembl	74_37	+1	known	silent	c.528	p.A176	0.528	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NTM	HGNC	ENSG00000182667				82	0	0	21	20	48.7805
USH1C	0	genome.wustl.edu	37	11	17542436	17542436	+	Silent	SNP	T	T	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	17542436	17542436	T	G	SNP	USH1C	ENST00000005226	human	ensembl	74_37	-1	known	silent	c.1191	p.V397	0.001	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	USH1C	HGNC	ENSG00000006611				355	1	0.280899	188	45	19.3133
LUZP2	0	genome.wustl.edu	37	11	24518846	24518846	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	24518846	24518846	C	T	SNP	LUZP2	ENST00000336930	human	ensembl	74_37	+1	known	silent	c.57	p.S19	1.000	NULL	NULL	-	no_errors	LUZP2	HGNC	ENSG00000187398				28	0	0	12	7	36.8421
IFITM5	0	genome.wustl.edu	37	11	299390	299390	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	299390	299390	C	T	SNP	IFITM5	ENST00000382614	human	ensembl	74_37	-1	known	missense	c.101	p.R34Q	0.021	pfam_CD225/Dispanin_fam	pfam_CD225/Dispanin_fam	-	no_errors	IFITM5	HGNC	ENSG00000206013				20	0	0	0	2	100
CHST1	0	genome.wustl.edu	37	11	45671632	45671632	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	45671632	45671632	T	G	SNP	CHST1	ENST00000308064	human	ensembl	74_37	-1	known	missense	c.842	p.N281T	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST1	HGNC	ENSG00000175264				123	0	0	87	8	8.42105
C11orf40	0	genome.wustl.edu	37	11	4598936	4598936	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	4598936	4598936	C	A	SNP	C11orf40	ENST00000307616	human	ensembl	74_37	-1	known	missense	c.115	p.V39F	0.001	NULL	NULL	-	no_errors	C11orf40	HGNC	ENSG00000171987				52	0	0	63	4	5.97015
OR51S1	0	genome.wustl.edu	37	11	4870119	4870119	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	4870119	4870119	A	T	SNP	OR51S1	ENST00000322101	human	ensembl	74_37	-1	known	missense	c.320	p.L107Q	0.005	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51S1	HGNC	ENSG00000176922				125	1	0.793651	94	8	7.84314
UBQLNL	0	genome.wustl.edu	37	11	5537086	5537086	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	5537086	5537086	A	G	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	missense	c.586	p.S196P	0.946	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518				158	0	0	83	32	27.8261
OR4C11	0	genome.wustl.edu	37	11	55371655	55371655	+	Silent	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	55371655	55371655	G	C	SNP	OR4C11	ENST00000302231	human	ensembl	74_37	-1	known	silent	c.195	p.S65	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C11	HGNC	ENSG00000172188				65	0	0	15	35	70
OR5D14	0	genome.wustl.edu	37	11	55563243	55563243	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	55563243	55563243	T	G	SNP	OR5D14	ENST00000335605	human	ensembl	74_37	+1	known	missense	c.212	p.V71G	0.037	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC	ENSG00000186113				67	0	0	56	29	34.1176
OR8K3	0	genome.wustl.edu	37	11	56086292	56086292	+	Silent	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	56086292	56086292	C	A	SNP	OR8K3	ENST00000312711	human	ensembl	74_37	+1	known	silent	c.510	p.G170	0.319	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K3	HGNC	ENSG00000181689				83	0	0	75	7	8.53659
OR8K3	0	genome.wustl.edu	37	11	56086642	56086642	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	56086642	56086642	T	C	SNP	OR8K3	ENST00000312711	human	ensembl	74_37	+1	known	missense	c.860	p.L287S	0.983	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K3	HGNC	ENSG00000181689				38	0	0	29	25	46.2963
OR10Q1	0	genome.wustl.edu	37	11	57995417	57995417	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	57995417	57995417	T	A	SNP	OR10Q1	ENST00000316770	human	ensembl	74_37	-1	known	missense	c.931	p.I311F	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Q1	HGNC	ENSG00000180475				312	0	0	178	24	11.8812
TCN1	0	genome.wustl.edu	37	11	59622291	59622291	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	59622291	59622291	C	T	SNP	TCN1	ENST00000257264	human	ensembl	74_37	-1	known	missense	c.955	p.A319T	0.000	pfam_Cbl-bd_transpt_euk	pfam_Cbl-bd_transpt_euk	-	no_errors	TCN1	HGNC	ENSG00000134827				89	0	0	72	5	6.49351
OR52L1	0	genome.wustl.edu	37	11	6007738	6007738	+	Silent	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	6007738	6007738	A	G	SNP	OR52L1	ENST00000332249	human	ensembl	74_37	-1	known	silent	c.423	p.Y141	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52L1	HGNC	ENSG00000183313				50	0	0	42	4	8.69565
SCGB1D2	0	genome.wustl.edu	37	11	62010904	62010904	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	62010904	62010904	G	A	SNP	SCGB1D2	ENST00000244926	human	ensembl	74_37	+1	known	missense	c.199	p.D67N	0.000	pfam_Secretoglobin,superfamily_Secretoglobin	pfam_Secretoglobin,superfamily_Secretoglobin	-	no_errors	SCGB1D2	HGNC	ENSG00000124935				154	0	0	63	31	32.9787
GANAB	0	genome.wustl.edu	37	11	62400952	62400952	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	11	62400952	62400952	C	G	SNP	GANAB	ENST00000346178	human	ensembl	74_37	-1	known	missense	c.661	p.A221P	1.000	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom	-	no_errors	GANAB	HGNC	ENSG00000089597				130	0	0	62	12	16.2162
TBX3	0	genome.wustl.edu	37	12	115112484	115112484	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	115112484	115112484	G	A	SNP	TBX3	ENST00000257566	human	ensembl	74_37	-1	known	missense	c.1256	p.A419V	0.000	NULL	pfam_TF_T-box,pfam_TBX,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX3	HGNC	ENSG00000135111				23	0	0	14	3	17.6471
KCNJ8	0	genome.wustl.edu	37	12	21919302	21919302	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	21919302	21919302	G	T	SNP	KCNJ8	ENST00000240662	human	ensembl	74_37	-1	known	missense	c.630	p.F210L	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir6.1	-	no_errors	KCNJ8	HGNC	ENSG00000121361				149	0	0	64	41	39.0476
LINC00477	0	genome.wustl.edu	37	12	24736551	24736551	+	RNA	SNP	A	A	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	24736551	24736551	A	T	SNP	LINC00477	ENST00000483544	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.445	-	-	-	no_errors	LINC00477	HGNC	ENSG00000197503				97	0	0	61	32	34.4086
ITPR2	0	genome.wustl.edu	37	12	26868257	26868257	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	26868257	26868257	C	A	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.830	p.S277I	1.000	pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104				142	1	0.699301	86	10	10.4167
CAPRIN2	0	genome.wustl.edu	37	12	30867934	30867934	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	30867934	30867934	C	G	SNP	CAPRIN2	ENST00000251071	human	ensembl	74_37	-1	known	missense	c.2609	p.R870T	0.972	pfam_Caprin-1_C	pfam_Caprin-1_C,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CAPRIN2	HGNC	ENSG00000110888				128	0	0	80	32	28.5714
KMT2D	0	genome.wustl.edu	37	12	49424534	49424534	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	49424534	49424534	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	silent	c.13689	p.P4563	0.905	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				133	0	0	36	4	10
GPD1	0	genome.wustl.edu	37	12	50498370	50498370	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	50498370	50498370	G	A	SNP	GPD1	ENST00000301149	human	ensembl	74_37	+1	known	missense	c.55	p.A19T	1.000	pfam_G3P_DH_NAD-dep_N,pirsf_G3P_DH_NAD-dep,prints_G3P_DH_NAD-dep,tigrfam_G3P_DH_NAD-dep_euk	pfam_G3P_DH_NAD-dep_N,pfam_G3P_DH_NAD-dep_C,superfamily_6-PGluconate_DH_C-like,pirsf_G3P_DH_NAD-dep,prints_G3P_DH_NAD-dep,tigrfam_G3P_DH_NAD-dep_euk	-	no_errors	GPD1	HGNC	ENSG00000167588				105	0	0	72	8	10
KRT75	0	genome.wustl.edu	37	12	52822136	52822136	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	52822136	52822136	C	G	SNP	KRT75	ENST00000252245	human	ensembl	74_37	-1	known	missense	c.1286	p.R429P	0.997	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT75	HGNC	ENSG00000170454				120	0	0	39	33	45.8333
TRHDE	0	genome.wustl.edu	37	12	72866849	72866849	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	72866849	72866849	G	T	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.1338	p.W446C	1.000	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657				153	0	0	113	8	6.61157
CD163L1	0	genome.wustl.edu	37	12	7531675	7531675	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	12	7531675	7531675	G	T	SNP	CD163L1	ENST00000313599	human	ensembl	74_37	-1	known	missense	c.2270	p.S757Y	0.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD163L1	HGNC	ENSG00000177675				77	0	0	51	42	45.1613
MAB21L1	0	genome.wustl.edu	37	13	36049843	36049843	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	13	36049843	36049843	A	T	SNP	MAB21L1	ENST00000379919	human	ensembl	74_37	-1	known	missense	c.433	p.Y145N	1.000	pfam_Mab-21_dom	pfam_Mab-21_dom	-	no_errors	MAB21L1	HGNC	ENSG00000180660				54	0	0	35	24	40.678
FREM2	0	genome.wustl.edu	37	13	39264690	39264690	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	13	39264690	39264690	T	C	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.3209	p.F1070S	0.042	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893				141	1	0.704225	119	14	10.5263
MIR5006	0	genome.wustl.edu	37	13	42142499	42142499	+	RNA	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	13	42142499	42142499	C	G	SNP	MIR5006	ENST00000583027	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.443	-	-	-	no_errors	MIR5006	HGNC	ENSG00000264190				34	0	0	15	13	46.4286
NKX2-1	0	genome.wustl.edu	37	14	36987124	36987124	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	14	36987124	36987124	C	T	SNP	NKX2-1	ENST00000354822	human	ensembl	74_37	-1	known	missense	c.565	p.A189T	1.000	superfamily_Homeodomain-like,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-1	HGNC	ENSG00000136352				26	0	0	10	5	33.3333
NRXN3	0	genome.wustl.edu	37	14	80164096	80164096	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	14	80164096	80164096	C	T	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.3797	p.A1266V	1.000	pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				87	0	0	43	7	14
SERPINA10	0	genome.wustl.edu	37	14	94754794	94754794	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	14	94754794	94754794	T	G	SNP	SERPINA10	ENST00000261994	human	ensembl	74_37	-1	known	missense	c.821	p.K274T	0.003	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA10	HGNC	ENSG00000140093				75	0	0	44	20	31.25
CHEK2P2	0	genome.wustl.edu	37	15	20496658	20496658	+	RNA	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	20496658	20496658	G	T	SNP	CHEK2P2	ENST00000555186	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.921	-	-	-	no_errors	CHEK2P2	HGNC	ENSG00000259156				78	0	0	54	4	6.89655
MKRN3	0	genome.wustl.edu	37	15	23811299	23811299	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	23811299	23811299	C	T	SNP	MKRN3	ENST00000314520	human	ensembl	74_37	+1	known	missense	c.370	p.R124W	0.001	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455				96	0	0	46	24	34.2857
NPAP1	0	genome.wustl.edu	37	15	24921898	24921898	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	24921898	24921898	C	T	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	missense	c.884	p.P295L	0.001	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823				112	0	0	82	5	5.74713
RYR3	0	genome.wustl.edu	37	15	33962623	33962623	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	33962623	33962623	T	G	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.5726	p.V1909G	1.000	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				40	0	0	36	16	30.7692
HAUS2	0	genome.wustl.edu	37	15	42855984	42855984	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	42855984	42855984	A	G	SNP	HAUS2	ENST00000260372	human	ensembl	74_37	+1	known	missense	c.427	p.I143V	1.000	NULL	NULL	-	no_errors	HAUS2	HGNC	ENSG00000137814				103	0	0	118	13	9.92366
CDAN1	0	genome.wustl.edu	37	15	43018353	43018353	+	Silent	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	43018353	43018353	C	A	SNP	CDAN1	ENST00000356231	human	ensembl	74_37	-1	known	silent	c.3210	p.L1070	1.000	NULL	NULL	-	no_errors	CDAN1	HGNC	ENSG00000140326				76	0	0	53	7	11.6667
SERF2	0	genome.wustl.edu	37	15	44085229	44085229	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	44085229	44085229	G	C	SNP	SERF2	ENST00000448830	human	ensembl	74_37	+1	known	missense	c.64	p.V22L	1.000	pfam_Uncharacterised_SERF	pfam_Uncharacterised_SERF	-	no_errors	SERF2	HGNC	ENSG00000140264				40	0	0	15	6	28.5714
TNFAIP8L3	0	genome.wustl.edu	37	15	51350609	51350609	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	51350609	51350609	C	T	SNP	TNFAIP8L3	ENST00000327536	human	ensembl	74_37	-1	known	silent	c.348	p.A116	0.998	pfam_DUF758	pfam_DUF758	-	no_errors	TNFAIP8L3	HGNC	ENSG00000183578				43	0	0	30	31	50.8197
DMXL2	0	genome.wustl.edu	37	15	51773769	51773769	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	51773769	51773769	C	T	SNP	DMXL2	ENST00000543779	human	ensembl	74_37	-1	known	missense	c.5534	p.R1845Q	1.000	pfam_Rav1p_C	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL2	HGNC	ENSG00000104093				48	0	0	57	15	20.8333
UNC13C	0	genome.wustl.edu	37	15	54307481	54307481	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	54307481	54307481	T	C	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	missense	c.2381	p.F794S	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766				48	0	0	14	7	33.3333
CACNA1H	0	genome.wustl.edu	37	16	1270395	1270395	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	16	1270395	1270395	C	T	SNP	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	missense	c.6463	p.R2155W	0.997	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557				44	0	0	28	13	31.7073
EARS2	0	genome.wustl.edu	37	16	23546255	23546255	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	16	23546255	23546255	G	A	SNP	EARS2	ENST00000449606	human	ensembl	74_37	-1	known	silent	c.912	p.P304	0.001	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,tigrfam_Glu-tRNA-ligase_bac/mito	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,superfamily_aa-tRNA-synth_I_codon-bd,prints_Glu/Gln-tRNA-synth,tigrfam_Glu-tRNA-ligase_bac/mito	-	no_errors	EARS2	HGNC	ENSG00000103356				48	0	0	27	13	32.5
CACNG3	0	genome.wustl.edu	37	16	24372925	24372925	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	16	24372925	24372925	G	A	SNP	CACNG3	ENST00000005284	human	ensembl	74_37	+1	known	missense	c.689	p.R230Q	1.000	NULL	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	-	no_errors	CACNG3	HGNC	ENSG00000006116				89	0	0	116	37	24.183
SALL1	0	genome.wustl.edu	37	16	51174933	51174933	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	16	51174933	51174933	C	T	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	silent	c.1200	p.S400	0.980	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449				149	0	0	30	51	62.963
MSLNL	0	genome.wustl.edu	37	16	824881	824881	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	16	824881	824881	C	T	SNP	MSLNL	ENST00000293892	human	ensembl	74_37	-1	known	missense	c.1691	p.R564H	0.000	pfam_Mesothelin	pfam_Mesothelin	-	no_errors	MSLNL	HGNC	ENSG00000162006				34	0	0	24	13	35.1351
CDH15	0	genome.wustl.edu	37	16	89254540	89254540	+	Silent	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	16	89254540	89254540	A	G	SNP	CDH15	ENST00000289746	human	ensembl	74_37	+1	known	silent	c.825	p.G275	0.112	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH15	HGNC	ENSG00000129910				26	0	0	4	7	63.6364
SLFN11	0	genome.wustl.edu	37	17	33690124	33690124	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	33690124	33690124	C	T	SNP	SLFN11	ENST00000308377	human	ensembl	74_37	-1	known	missense	c.703	p.V235I	0.000	pfam_ATPase_AAA-4	pfam_ATPase_AAA-4,pfam_DUF2075,superfamily_P-loop_NTPase	-	no_errors	SLFN11	HGNC	ENSG00000172716				116	0	0	88	44	33.3333
PIGW	0	genome.wustl.edu	37	17	34894027	34894027	+	Silent	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	34894027	34894027	A	G	SNP	PIGW	ENST00000328396	human	ensembl	74_37	+1	known	silent	c.1077	p.V359	0.001	pfam_GWT1,pirsf_GWT1	pfam_GWT1,pirsf_GWT1	-	no_errors	PIGW	HGNC	ENSG00000184886				40	0	0	55	4	6.77966
FZD2	0	genome.wustl.edu	37	17	42636253	42636253	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	42636253	42636253	C	T	SNP	FZD2	ENST00000315323	human	ensembl	74_37	+1	known	silent	c.1197	p.S399	1.000	pfam_Frizzled,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD2	HGNC	ENSG00000180340				157	0	0	61	37	37.7551
KPNB1	0	genome.wustl.edu	37	17	45736015	45736015	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	45736015	45736015	T	G	SNP	KPNB1	ENST00000290158	human	ensembl	74_37	+1	known	missense	c.625	p.F209V	1.000	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,pfam_Armadillo,superfamily_ARM-type_fold,smart_Importin-beta_N,smart_Armadillo,pfscan_HEAT_type_2,pfscan_Importin-beta_N	-	no_errors	KPNB1	HGNC	ENSG00000108424				68	0	0	75	4	5.06329
SP6	0	genome.wustl.edu	37	17	45924989	45924989	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	45924989	45924989	C	T	SNP	SP6	ENST00000342234	human	ensembl	74_37	-1	known	silent	c.807	p.S269	0.996	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP6	HGNC	ENSG00000189120				85	0	0	43	7	14
MTMR4	0	genome.wustl.edu	37	17	56589814	56589814	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	56589814	56589814	G	A	SNP	MTMR4	ENST00000323456	human	ensembl	74_37	-1	known	silent	c.147	p.A49	0.067	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR4	HGNC	ENSG00000108389				89	0	0	43	21	32.8125
TEX14	0	genome.wustl.edu	37	17	56700326	56700326	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	56700326	56700326	C	T	SNP	TEX14	ENST00000240361	human	ensembl	74_37	-1	known	missense	c.299	p.G100D	0.986	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	TEX14	HGNC	ENSG00000121101				54	0	0	35	7	16.6667
XAF1	0	genome.wustl.edu	37	17	6674284	6674284	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	6674284	6674284	C	T	SNP	XAF1	ENST00000361842	human	ensembl	74_37	+1	known	missense	c.830	p.P277L	0.986	NULL	superfamily_TRAF-like,pfscan_Znf_TRAF	-	no_errors	XAF1	HGNC	ENSG00000132530				61	0	0	43	7	14
TP53	0	genome.wustl.edu	37	17	7577082	7577082	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	7577082	7577082	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.856	p.E286K	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				67	0	0	14	15	51.7241
POTEC	0	genome.wustl.edu	37	18	14513764	14513764	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	18	14513764	14513764	C	T	SNP	POTEC	ENST00000358970	human	ensembl	74_37	-1	known	missense	c.1430	p.R477Q	0.121	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEC	HGNC	ENSG00000183206				49	0	0	35	4	10.2564
EPG5	0	genome.wustl.edu	37	18	43508856	43508856	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	18	43508856	43508856	C	G	SNP	EPG5	ENST00000282041	human	ensembl	74_37	-1	known	missense	c.2532	p.E844D	0.898	NULL	NULL	-	no_errors	EPG5	HGNC	ENSG00000152223				81	0	0	40	4	9.09091
ZNF443	0	genome.wustl.edu	37	19	12542652	12542652	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	12542652	12542652	C	T	SNP	ZNF443	ENST00000301547	human	ensembl	74_37	-1	known	missense	c.334	p.V112I	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF443	HGNC	ENSG00000180855				72	0	0	55	13	19.1176
ZNF443	0	genome.wustl.edu	37	19	12542658	12542658	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	12542658	12542658	C	T	SNP	ZNF443	ENST00000301547	human	ensembl	74_37	-1	known	missense	c.328	p.E110K	0.003	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF443	HGNC	ENSG00000180855				72	0	0	54	13	19.403
NDUFB7	0	genome.wustl.edu	37	19	14677059	14677059	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	14677059	14677059	C	T	SNP	NDUFB7	ENST00000215565	human	ensembl	74_37	-1	known	silent	c.300	p.K100	1.000	pfam_NADH_UbQ_OxRdtase_B18_su	pfam_NADH_UbQ_OxRdtase_B18_su	-	no_errors	NDUFB7	HGNC	ENSG00000099795				77	0	0	46	6	11.5385
REXO1	0	genome.wustl.edu	37	19	1820356	1820356	+	Silent	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	1820356	1820356	G	T	SNP	REXO1	ENST00000170168	human	ensembl	74_37	-1	known	silent	c.2433	p.G811	1.000	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	REXO1	HGNC	ENSG00000079313				191	0	0	61	30	32.967
ZNF675	0	genome.wustl.edu	37	19	23836362	23836362	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	23836362	23836362	C	T	SNP	ZNF675	ENST00000359788	human	ensembl	74_37	-1	known	missense	c.1373	p.G458D	0.996	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF675	HGNC	ENSG00000197372				62	0	0	25	18	41.8605
ZNF57	0	genome.wustl.edu	37	19	2918038	2918038	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	2918038	2918038	G	C	SNP	ZNF57	ENST00000306908	human	ensembl	74_37	+1	known	missense	c.1419	p.E473D	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF57	HGNC	ENSG00000171970				83	0	0	58	9	13.4328
WTIP	0	genome.wustl.edu	37	19	34991055	34991055	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	34991055	34991055	G	A	SNP	WTIP	ENST00000270288	human	ensembl	74_37	+1	known	missense	c.1846	p.G616R	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	WTIP	HGNC	ENSG00000142279				49	0	0	18	3	14.2857
ZNF599	0	genome.wustl.edu	37	19	35250996	35250996	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	35250996	35250996	C	T	SNP	ZNF599	ENST00000329285	human	ensembl	74_37	-1	known	missense	c.710	p.R237H	0.003	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF599	HGNC	ENSG00000153896				166	0	0	89	51	36.4286
FAM187B	0	genome.wustl.edu	37	19	35719577	35719577	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	35719577	35719577	G	T	SNP	FAM187B	ENST00000324675	human	ensembl	74_37	-1	known	missense	c.7	p.P3T	0.001	NULL	NULL	-	no_errors	FAM187B	HGNC	ENSG00000177558				44	0	0	34	3	8.10811
ARHGAP33	0	genome.wustl.edu	37	19	36276129	36276129	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	36276129	36276129	G	C	SNP	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	missense	c.1760	p.G587A	0.055	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777				65	0	0	29	6	17.1429
ZNF570	0	genome.wustl.edu	37	19	37975729	37975729	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	37975729	37975729	C	A	SNP	ZNF570	ENST00000330173	human	ensembl	74_37	+1	known	missense	c.1205	p.A402D	0.242	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF570	HGNC	ENSG00000171827				91	0	0	37	30	44.7761
CIC	0	genome.wustl.edu	37	19	42795827	42795827	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	42795827	42795827	G	C	SNP	CIC	ENST00000575354	human	ensembl	74_37	+1	known	missense	c.2816	p.G939A	0.998	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				156	1	0.636943	69	22	24.1758
ARHGAP35	0	genome.wustl.edu	37	19	47422058	47422058	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	47422058	47422058	C	T	SNP	ARHGAP35	ENST00000404338	human	ensembl	74_37	+1	known	silent	c.126	p.F42	0.399	superfamily_P-loop_NTPase	pfam_RhoGAP_dom,pfam_Small_GTPase,pfam_FF_domain,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP35	HGNC	ENSG00000160007				129	0	0	103	9	8.03571
SEC1P	0	genome.wustl.edu	37	19	49183957	49183957	+	RNA	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	49183957	49183957	C	T	SNP	SEC1P	ENST00000430145	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SEC1P	HGNC	ENSG00000232871				27	0	0	6	5	45.4545
NLRP8	0	genome.wustl.edu	37	19	56466705	56466705	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	56466705	56466705	C	T	SNP	NLRP8	ENST00000291971	human	ensembl	74_37	+1	known	silent	c.1281	p.F427	0.097	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP8	HGNC	ENSG00000179709				123	0	0	116	38	24.6753
PEG3	0	genome.wustl.edu	37	19	57326846	57326846	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	57326846	57326846	C	A	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	missense	c.2964	p.Q988H	0.980	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300				99	0	0	90	25	21.7391
ZNF749	0	genome.wustl.edu	37	19	57955724	57955724	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	57955724	57955724	T	A	SNP	ZNF749	ENST00000334181	human	ensembl	74_37	+1	known	missense	c.1208	p.V403D	0.801	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF749	HGNC	ENSG00000186230				82	0	0	120	10	7.69231
INSR	0	genome.wustl.edu	37	19	7132175	7132175	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	7132175	7132175	C	T	SNP	INSR	ENST00000302850	human	ensembl	74_37	-1	known	missense	c.2836	p.D946N	0.995	pirsf_Tyr_kinase_insulin-like_rcpt,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSR	HGNC	ENSG00000171105				101	0	0	44	10	18.5185
MISP	0	genome.wustl.edu	37	19	758149	758149	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	758149	758149	G	A	SNP	MISP	ENST00000215582	human	ensembl	74_37	+1	known	silent	c.1203	p.P401	0.000	NULL	NULL	-	no_errors	MISP	HGNC	ENSG00000099812				32	0	0	10	12	54.5455
MUC16	0	genome.wustl.edu	37	19	9071717	9071717	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	9071717	9071717	C	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.15729	p.V5243	0.002	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				137	0	0	86	23	21.1009
SLC35F5	0	genome.wustl.edu	37	2	114500332	114500332	+	Silent	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	114500332	114500332	C	G	SNP	SLC35F5	ENST00000245680	human	ensembl	74_37	-1	known	silent	c.687	p.L229	0.993	NULL	pfam_DMT	-	no_errors	SLC35F5	HGNC	ENSG00000115084				102	0	0	131	10	7.0922
ACTR3	0	genome.wustl.edu	37	2	114699799	114699799	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	114699799	114699799	G	T	SNP	ACTR3	ENST00000263238	human	ensembl	74_37	+1	known	nonsense	c.721	p.E241*	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related	-	no_errors	ACTR3	HGNC	ENSG00000115091				26	0	0	48	24	33.3333
ERCC3	0	genome.wustl.edu	37	2	128044384	128044384	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	128044384	128044384	G	T	SNP	ERCC3	ENST00000285398	human	ensembl	74_37	-1	known	missense	c.1237	p.L413M	1.000	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd,tigrfam_Helicase_Ercc3	pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_Helicase_Ercc3,tigrfam_Helicase_Ercc3	-	no_errors	ERCC3	HGNC	ENSG00000163161				143	0	0	69	36	34.2857
POTEE	0	genome.wustl.edu	37	2	131976470	131976470	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	131976470	131976470	C	T	SNP	POTEE	ENST00000356920	human	ensembl	74_37	+1	known	silent	c.495	p.D165	0.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEE	HGNC	ENSG00000188219				236	0	0	97	21	17.7966
TUBA3D	0	genome.wustl.edu	37	2	132238306	132238306	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	132238306	132238306	G	T	SNP	TUBA3D	ENST00000321253	human	ensembl	74_37	+1	known	missense	c.1040	p.C347F	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3D	HGNC	ENSG00000075886				133	0	0	80	12	13.0435
THSD7B	0	genome.wustl.edu	37	2	137814225	137814225	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	137814225	137814225	G	T	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	missense	c.375	p.K125N	0.001	superfamily_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229				57	0	0	53	6	10.1695
TBR1	0	genome.wustl.edu	37	2	162274729	162274729	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	162274729	162274729	C	A	SNP	TBR1	ENST00000389554	human	ensembl	74_37	+1	known	missense	c.865	p.H289N	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBR1	HGNC	ENSG00000136535				59	0	0	46	5	9.80392
XIRP2	0	genome.wustl.edu	37	2	168104063	168104063	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	168104063	168104063	A	C	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.6161	p.N2054T	0.998	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092				57	0	0	30	12	28.5714
KLHL41	0	genome.wustl.edu	37	2	170366712	170366712	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	170366712	170366712	G	A	SNP	KLHL41	ENST00000284669	human	ensembl	74_37	+1	known	missense	c.424	p.G142R	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL41	HGNC	ENSG00000239474				181	0	0	191	12	5.91133
SF3B1	0	genome.wustl.edu	37	2	198263275	198263275	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	198263275	198263275	T	C	SNP	SF3B1	ENST00000335508	human	ensembl	74_37	-1	known	missense	c.3044	p.D1015G	1.000	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524				89	0	0	98	7	6.66667
TMEM169	0	genome.wustl.edu	37	2	216964986	216964986	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	216964986	216964986	G	A	SNP	TMEM169	ENST00000295658	human	ensembl	74_37	+1	known	silent	c.615	p.S205	0.011	NULL	NULL	-	no_errors	TMEM169	HGNC	ENSG00000163449				225	0	0	108	54	33.3333
COL4A4	0	genome.wustl.edu	37	2	227886829	227886829	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	227886829	227886829	G	A	SNP	COL4A4	ENST00000396625	human	ensembl	74_37	-1	known	missense	c.4151	p.A1384V	0.902	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A4	HGNC	ENSG00000081052				246	0	0	161	10	5.84795
COPS7B	0	genome.wustl.edu	37	2	232672347	232672347	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	232672347	232672347	C	T	SNP	COPS7B	ENST00000350033	human	ensembl	74_37	+1	known	missense	c.787	p.R263C	1.000	NULL	pfam_PCI_dom,smart_PCI_dom	-	no_errors	COPS7B	HGNC	ENSG00000144524				10	0	0	4	3	42.8571
COL6A3	0	genome.wustl.edu	37	2	238287440	238287440	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	238287440	238287440	C	A	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.2336	p.S779I	0.011	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				45	0	0	45	6	11.7647
COLEC11	0	genome.wustl.edu	37	2	3691470	3691470	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	3691470	3691470	T	A	SNP	COLEC11	ENST00000418971	human	ensembl	74_37	+1	known	missense	c.620	p.L207Q	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	COLEC11	HGNC	ENSG00000118004				87	0	0	76	6	7.31707
RTN4	0	genome.wustl.edu	37	2	55254236	55254236	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	55254236	55254236	C	T	SNP	RTN4	ENST00000337526	human	ensembl	74_37	-1	known	silent	c.999	p.K333	0.088	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN4	HGNC	ENSG00000115310				25	0	0	81	5	5.81395
CCDC85A	0	genome.wustl.edu	37	2	56419955	56419955	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	56419955	56419955	T	A	SNP	CCDC85A	ENST00000407595	human	ensembl	74_37	+1	known	missense	c.620	p.V207E	1.000	pfam_DUF2216_coiled-coil	pfam_DUF2216_coiled-coil	-	no_errors	CCDC85A	HGNC	ENSG00000055813				91	0	0	80	11	12.0879
SIRPB1	0	genome.wustl.edu	37	20	1558984	1558984	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	20	1558984	1558984	C	T	SNP	SIRPB1	ENST00000381605	human	ensembl	74_37	-1	known	missense	c.433	p.A145T	0.079	NULL	pfam_Ig_C1-set,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	SIRPB1	HGNC	ENSG00000101307				166	0	0	136	24	15
FRG1B	0	genome.wustl.edu	37	20	29633900	29633900	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	20	29633900	29633900	A	G	SNP	FRG1B	ENST00000278882	human	ensembl	74_37	+1	known	missense	c.539	p.E180G	1.000	NULL	pfam_FRG1,superfamily_Actin_cross-linking	-	no_errors	FRG1B	HGNC	ENSG00000149531				72	0	0	40	5	11.1111
PTPRT	0	genome.wustl.edu	37	20	41101196	41101196	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	20	41101196	41101196	A	C	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.1160	p.V387G	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				68	0	0	14	27	65.8537
SLC12A5	0	genome.wustl.edu	37	20	44665965	44665965	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	20	44665965	44665965	T	A	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	missense	c.622	p.Y208N	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140				67	0	0	28	14	33.3333
TPTE	0	genome.wustl.edu	37	21	10941929	10941929	+	Silent	SNP	A	A	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	21	10941929	10941929	A	C	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	silent	c.774	p.S258	0.998	pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157				224	0	0	160	26	13.9785
TPTE	0	genome.wustl.edu	37	21	10941963	10941963	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	21	10941963	10941963	A	C	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	missense	c.740	p.I247S	1.000	pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157				192	0	0	161	20	11.0497
BAGE2	0	genome.wustl.edu	37	21	11038748	11038748	+	RNA	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	21	11038748	11038748	C	T	SNP	BAGE2	ENST00000470054	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BAGE2	HGNC	ENSG00000187172				170	1	0.584795	188	24	11.3208
ADAMTS5	0	genome.wustl.edu	37	21	28315754	28315754	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	21	28315754	28315754	C	A	SNP	ADAMTS5	ENST00000284987	human	ensembl	74_37	-1	known	missense	c.1350	p.K450N	0.739	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_ADAM_spacer1,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS5,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS5	HGNC	ENSG00000154736				38	0	0	27	5	15.625
SCAF4	0	genome.wustl.edu	37	21	33044320	33044320	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	21	33044320	33044320	G	C	SNP	SCAF4	ENST00000286835	human	ensembl	74_37	-1	known	missense	c.2836	p.Q946E	0.941	NULL	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304				76	0	0	56	12	17.6471
AGPAT3	0	genome.wustl.edu	37	21	45390565	45390565	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	21	45390565	45390565	C	T	SNP	AGPAT3	ENST00000291572	human	ensembl	74_37	+1	known	missense	c.542	p.T181M	1.000	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	AGPAT3	HGNC	ENSG00000160216				74	0	0	24	3	11.1111
COL6A2	0	genome.wustl.edu	37	21	47545973	47545973	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	21	47545973	47545973	C	T	SNP	COL6A2	ENST00000300527	human	ensembl	74_37	+1	known	silent	c.2244	p.C748	0.002	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A2	HGNC	ENSG00000142173				286	0	0	129	11	7.85714
COL6A2	0	genome.wustl.edu	37	21	47552310	47552310	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	21	47552310	47552310	C	T	SNP	COL6A2	ENST00000300527	human	ensembl	74_37	+1	known	silent	c.2904	p.N968	0.986	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A2	HGNC	ENSG00000142173				68	0	0	16	17	51.5152
RIMBP3	0	genome.wustl.edu	37	22	20457383	20457383	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	22	20457383	20457383	G	T	SNP	RIMBP3	ENST00000426804	human	ensembl	74_37	-1	known	missense	c.3919	p.P1307T	0.003	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	RIMBP3	HGNC	ENSG00000196622				9	0	0	2	4	66.6667
BMS1P20	0	genome.wustl.edu	37	22	22664606	22664606	+	RNA	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	22	22664606	22664606	A	G	SNP	BMS1P20	ENST00000426066	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	BMS1P20	HGNC	ENSG00000236850				26	0	0	21	3	12.5
FAM83F	0	genome.wustl.edu	37	22	40417654	40417654	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	22	40417654	40417654	G	A	SNP	FAM83F	ENST00000333407	human	ensembl	74_37	+1	known	silent	c.1140	p.T380	0.000	NULL	pfam_DUF1669	-	no_errors	FAM83F	HGNC	ENSG00000133477				66	0	0	30	9	23.0769
TBC1D22A	0	genome.wustl.edu	37	22	47274558	47274558	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	22	47274558	47274558	G	A	SNP	TBC1D22A	ENST00000337137	human	ensembl	74_37	+1	known	missense	c.647	p.R216Q	0.382	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D22A	HGNC	ENSG00000054611				138	0	0	67	5	6.94444
IMPG2	0	genome.wustl.edu	37	3	100972610	100972610	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	100972610	100972610	C	T	SNP	IMPG2	ENST00000193391	human	ensembl	74_37	-1	known	missense	c.1169	p.R390H	0.936	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG2	HGNC	ENSG00000081148				21	0	0	18	5	21.7391
EPHB1	0	genome.wustl.edu	37	3	134670563	134670563	+	Silent	SNP	A	A	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	134670563	134670563	A	T	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	silent	c.474	p.V158	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928				256	0	0	199	19	8.7156
ZIC1	0	genome.wustl.edu	37	3	147128842	147128842	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	147128842	147128842	C	T	SNP	ZIC1	ENST00000282928	human	ensembl	74_37	+1	known	missense	c.943	p.R315C	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC1	HGNC	ENSG00000152977				118	0	0	48	24	33.3333
PLD1	0	genome.wustl.edu	37	3	171405343	171405343	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	171405343	171405343	C	A	SNP	PLD1	ENST00000351298	human	ensembl	74_37	-1	known	missense	c.1571	p.R524I	0.259	pirsf_PLipase_D_euk	pfam_Phox,pfam_PLipase_D/transphosphatidylase,pfam_Pleckstrin_homology,superfamily_Phox,smart_Phox,smart_Pleckstrin_homology,smart_PLipase_D/transphosphatidylase,pirsf_PLipase_D_euk,pfscan_Phox,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD1	HGNC	ENSG00000075651				57	0	0	79	5	5.95238
KCNMB2	0	genome.wustl.edu	37	3	178560462	178560462	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	178560462	178560462	G	A	SNP	KCNMB2	ENST00000358316	human	ensembl	74_37	+1	known	missense	c.445	p.G149R	1.000	pfam_K_chnl_Ca-activ_BK_bsu	pfam_K_chnl_Ca-activ_BK_bsu,pfam_KCNMB2_ball_chain_dom,prints_K_chnl_Ca-activ_BK_bsu	-	no_errors	KCNMB2	HGNC	ENSG00000197584				57	0	0	46	32	41.0256
ABCC5	0	genome.wustl.edu	37	3	183660618	183660618	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	183660618	183660618	G	A	SNP	ABCC5	ENST00000334444	human	ensembl	74_37	-1	known	silent	c.3591	p.N1197	0.992	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC5	HGNC	ENSG00000114770				85	0	0	44	28	38.8889
MAP3K13	0	genome.wustl.edu	37	3	185195129	185195129	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	185195129	185195129	T	A	SNP	MAP3K13	ENST00000265026	human	ensembl	74_37	+1	known	missense	c.2446	p.S816T	1.000	pirsf_MAP3K12_MAP3K13	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K13	HGNC	ENSG00000073803				65	0	0	25	13	34.2105
MUC4	0	genome.wustl.edu	37	3	195492218	195492218	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	195492218	195492218	C	G	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.13721	p.W4574S	0.983	pfam_AMOP,smart_AMOP,pfscan_AMOP	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				59	0	0	34	16	32
SDHAP1	0	genome.wustl.edu	37	3	195706728	195706728	+	RNA	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	195706728	195706728	C	T	SNP	SDHAP1	ENST00000413474	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SDHAP1	HGNC	ENSG00000185485				24	0	0	12	6	33.3333
P4HTM	0	genome.wustl.edu	37	3	49042339	49042339	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	49042339	49042339	C	G	SNP	P4HTM	ENST00000343546	human	ensembl	74_37	+1	known	missense	c.933	p.S311R	0.096	smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	P4HTM	HGNC	ENSG00000178467				161	0	0	75	39	34.2105
WDR6	0	genome.wustl.edu	37	3	49049539	49049539	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	49049539	49049539	C	T	SNP	WDR6	ENST00000395474	human	ensembl	74_37	+1	known	missense	c.662	p.T221I	0.001	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR6	HGNC	ENSG00000178252				95	0	0	57	32	35.9551
FAM212A	0	genome.wustl.edu	37	3	49842272	49842272	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	49842272	49842272	G	A	SNP	FAM212A	ENST00000333323	human	ensembl	74_37	+1	known	missense	c.716	p.R239K	1.000	NULL	NULL	-	no_errors	FAM212A	HGNC	ENSG00000185614				215	0	0	97	11	10.1852
GRM2	0	genome.wustl.edu	37	3	51749890	51749890	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	51749890	51749890	G	A	SNP	GRM2	ENST00000395052	human	ensembl	74_37	+1	known	missense	c.2101	p.E701K	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM2	HGNC	ENSG00000164082				54	0	0	29	15	34.0909
TLR9	0	genome.wustl.edu	37	3	52257833	52257833	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	52257833	52257833	G	T	SNP	TLR9	ENST00000597542	human	ensembl	74_37	-1	known	missense	c.571	p.H191N	0.000	NULL	pfam_Leu-rich_rpt,pfam_TIR_dom,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR9	HGNC	ENSG00000239732				238	0	0	146	25	14.6199
CNTN3	0	genome.wustl.edu	37	3	74344358	74344358	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	74344358	74344358	C	A	SNP	CNTN3	ENST00000263665	human	ensembl	74_37	-1	known	missense	c.2431	p.A811S	0.985	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN3	HGNC	ENSG00000113805				66	0	0	37	12	24.4898
GRM7	0	genome.wustl.edu	37	3	7456772	7456772	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	3	7456772	7456772	G	A	SNP	GRM7	ENST00000402647	human	ensembl	74_37	+1	known	missense	c.1096	p.E366K	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_7,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM7	HGNC	ENSG00000196277				53	0	0	22	23	51.1111
ALPK1	0	genome.wustl.edu	37	4	113360967	113360967	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	113360967	113360967	G	T	SNP	ALPK1	ENST00000177648	human	ensembl	74_37	+1	known	missense	c.3477	p.L1159F	1.000	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	ALPK1	HGNC	ENSG00000073331				50	0	0	36	10	21.7391
CEP170P1	0	genome.wustl.edu	37	4	119461400	119461400	+	RNA	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	119461400	119461400	C	T	SNP	CEP170P1	ENST00000412784	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CEP170P1	HGNC	ENSG00000154608				51	0	0	31	4	11.4286
FAT4	0	genome.wustl.edu	37	4	126237908	126237908	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	126237908	126237908	G	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	silent	c.342	p.A114	0.979	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				59	0	0	25	14	35.8974
ELF2	0	genome.wustl.edu	37	4	139994712	139994712	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	139994712	139994712	G	A	SNP	ELF2	ENST00000379550	human	ensembl	74_37	-1	known	missense	c.248	p.S83L	1.000	pfam_TF_Elf_N	pfam_TF_Elf_N,pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELF2	HGNC	ENSG00000109381				50	0	0	20	20	50
INPP4B	0	genome.wustl.edu	37	4	143114264	143114264	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	143114264	143114264	T	C	SNP	INPP4B	ENST00000509777	human	ensembl	74_37	-1	known	missense	c.1157	p.H386R	0.506	NULL	superfamily_C2_dom	-	no_errors	INPP4B	HGNC	ENSG00000109452				112	0	0	83	5	5.68182
RBM46	0	genome.wustl.edu	37	4	155719267	155719267	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	155719267	155719267	G	T	SNP	RBM46	ENST00000281722	human	ensembl	74_37	+1	known	missense	c.456	p.K152N	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	RBM46	HGNC	ENSG00000151962				55	0	0	44	12	21.4286
FSTL5	0	genome.wustl.edu	37	4	162307121	162307121	+	Silent	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	162307121	162307121	C	A	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	silent	c.2322	p.G774	0.998	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843				120	0	0	71	26	26.8041
TMEM192	0	genome.wustl.edu	37	4	166021837	166021837	+	Silent	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	166021837	166021837	A	G	SNP	TMEM192	ENST00000306480	human	ensembl	74_37	-1	known	silent	c.382	p.L128	0.872	NULL	NULL	-	no_errors	TMEM192	HGNC	ENSG00000170088				59	0	0	21	11	34.375
FAT1	0	genome.wustl.edu	37	4	187541092	187541092	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	187541092	187541092	G	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	nonsense	c.6648	p.Y2216*	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				232	0	0	65	40	38.0952
HTT	0	genome.wustl.edu	37	4	3240697	3240697	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	3240697	3240697	C	T	SNP	HTT	ENST00000355072	human	ensembl	74_37	+1	known	silent	c.9207	p.V3069	0.202	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386				24	0	0	7	6	46.1538
GABRB1	0	genome.wustl.edu	37	4	47405587	47405587	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	47405587	47405587	C	T	SNP	GABRB1	ENST00000295454	human	ensembl	74_37	+1	known	nonsense	c.694	p.R232*	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB1	HGNC	ENSG00000163288				91	0	0	67	6	8.21918
MEPE	0	genome.wustl.edu	37	4	88767774	88767774	+	RNA	SNP	A	A	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	4	88767774	88767774	A	T	SNP	MEPE	ENST00000508016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MEPE	HGNC	ENSG00000152595				9	0	0	6	6	50
TRIM36	0	genome.wustl.edu	37	5	114473223	114473223	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	114473223	114473223	C	T	SNP	TRIM36	ENST00000282369	human	ensembl	74_37	-1	known	missense	c.958	p.A320T	0.992	NULL	pfam_Znf_B-box,pfam_Fibronectin_type3,pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM36	HGNC	ENSG00000152503				108	0	0	75	21	21.875
TIFAB	0	genome.wustl.edu	37	5	134785360	134785360	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	134785360	134785360	C	T	SNP	TIFAB	ENST00000537858	human	ensembl	74_37	-1	known	silent	c.270	p.T90	0.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain	pfam_FHA_dom,superfamily_SMAD_FHA_domain	-	no_errors	TIFAB	HGNC	ENSG00000255833				223	0	0	103	13	11.2069
BRD8	0	genome.wustl.edu	37	5	137503737	137503737	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	137503737	137503737	C	A	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	missense	c.673	p.G225C	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983				177	1	0.561798	47	28	37.3333
BRD8	0	genome.wustl.edu	37	5	137503739	137503739	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	137503739	137503739	G	A	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	missense	c.671	p.S224F	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983				171	0	0	43	40	48.1928
PCDHA11	0	genome.wustl.edu	37	5	140249772	140249772	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	140249772	140249772	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	missense	c.1084	p.A362T	0.545	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158				118	0	0	25	36	59.0164
PCDHA11	0	genome.wustl.edu	37	5	140249918	140249918	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	140249918	140249918	C	T	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	silent	c.1230	p.S410	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158				283	0	0	45	69	60.5263
PCDHGA1	0	genome.wustl.edu	37	5	140711893	140711893	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	140711893	140711893	C	A	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	missense	c.1642	p.L548I	0.043	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956				397	0	0	214	12	5.30973
PCDHGA2	0	genome.wustl.edu	37	5	140720422	140720422	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	140720422	140720422	G	A	SNP	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	silent	c.1884	p.T628	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853				141	0	0	71	57	44.5312
PCDHGA12	0	genome.wustl.edu	37	5	140811189	140811189	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	140811189	140811189	C	T	SNP	PCDHGA12	ENST00000252085	human	ensembl	74_37	+1	known	missense	c.863	p.A288V	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA12	HGNC	ENSG00000253159				165	0	0	121	9	6.92308
SH3TC2	0	genome.wustl.edu	37	5	148411175	148411175	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	148411175	148411175	C	A	SNP	SH3TC2	ENST00000515425	human	ensembl	74_37	-1	known	missense	c.1077	p.E359D	0.885	NULL	pfam_SH3_domain,pfam_TPR_1,superfamily_SH3_domain,smart_SH3_domain,smart_TPR_repeat,pfscan_SH3_domain	-	no_errors	SH3TC2	HGNC	ENSG00000169247				82	0	0	28	11	28.2051
GRIA1	0	genome.wustl.edu	37	5	152870498	152870498	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	152870498	152870498	T	C	SNP	GRIA1	ENST00000285900	human	ensembl	74_37	+1	known	missense	c.50	p.V17A	1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511				282	0	0	94	17	15.3153
EBF1	0	genome.wustl.edu	37	5	158223440	158223440	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	158223440	158223440	C	T	SNP	EBF1	ENST00000313708	human	ensembl	74_37	-1	known	silent	c.822	p.T274	0.995	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_IPT,superfamily_Ig_E-set,superfamily_bHLH_dom,smart_IPT	-	no_errors	EBF1	HGNC	ENSG00000164330				70	0	0	18	3	14.2857
GABRA1	0	genome.wustl.edu	37	5	161324161	161324161	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	161324161	161324161	C	T	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	silent	c.1104	p.Y368	0.994	superfamily_Neurotrans-gated_channel_TM,prints_GABBAa1_rcpt	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355				166	0	0	59	46	43.8095
CDH18	0	genome.wustl.edu	37	5	19838884	19838884	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	19838884	19838884	G	A	SNP	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	missense	c.212	p.P71L	1.000	pfam_Cadherin,superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526				30	0	0	40	9	18.3673
GPBP1	0	genome.wustl.edu	37	5	56526984	56526984	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	56526984	56526984	A	G	SNP	GPBP1	ENST00000424459	human	ensembl	74_37	+1	known	missense	c.247	p.N83D	1.000	NULL	NULL	-	no_errors	GPBP1	HGNC	ENSG00000062194				73	0	0	44	3	6.38298
ATG10	0	genome.wustl.edu	37	5	81474361	81474361	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	81474361	81474361	T	A	SNP	ATG10	ENST00000282185	human	ensembl	74_37	+1	known	nonsense	c.408	p.Y136*	0.150	pfam_Autophagy-rel_prot_3	pfam_Autophagy-rel_prot_3	-	no_errors	ATG10	HGNC	ENSG00000152348				132	0	0	55	17	23.6111
VCAN	0	genome.wustl.edu	37	5	82835937	82835937	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	82835937	82835937	G	T	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.7115	p.S2372I	0.000	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				70	0	0	42	33	44
VCAN	0	genome.wustl.edu	37	5	82837419	82837419	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	82837419	82837419	A	T	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.8597	p.K2866M	0.248	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				106	0	0	89	8	8.24742
TTC37	0	genome.wustl.edu	37	5	94857966	94857966	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	5	94857966	94857966	C	A	SNP	TTC37	ENST00000358746	human	ensembl	74_37	-1	known	missense	c.1803	p.W601C	1.000	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC37	HGNC	ENSG00000198677				67	0	0	52	19	26.7606
EDN1	0	genome.wustl.edu	37	6	12290906	12290906	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	12290906	12290906	G	T	SNP	EDN1	ENST00000379375	human	ensembl	74_37	+1	known	missense	c.44	p.C15F	0.996	NULL	pfam_Endothln-like_toxin,smart_Endothln-like_toxin,prints_Bibrotoxin/Sarafotoxin-D	-	no_errors	EDN1	HGNC	ENSG00000078401				66	0	0	25	17	40.4762
UTRN	0	genome.wustl.edu	37	6	145124231	145124231	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	145124231	145124231	G	A	SNP	UTRN	ENST00000367545	human	ensembl	74_37	+1	known	missense	c.9305	p.R3102Q	1.000	pfam_Znf_ZZ,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_Znf_ZZ	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818				56	0	0	32	8	20
ZKSCAN8	0	genome.wustl.edu	37	6	28121579	28121579	+	Silent	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	28121579	28121579	A	G	SNP	ZKSCAN8	ENST00000330236	human	ensembl	74_37	+1	known	silent	c.1521	p.E507	0.610	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN8	HGNC	ENSG00000198315				78	0	0	52	7	11.8644
OR12D2	0	genome.wustl.edu	37	6	29365024	29365024	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	29365024	29365024	T	C	SNP	OR12D2	ENST00000383555	human	ensembl	74_37	+1	known	missense	c.548	p.L183P	0.060	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR12D2	HGNC	ENSG00000168787				143	0	0	125	19	13.1944
VWA7	0	genome.wustl.edu	37	6	31733544	31733544	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	31733544	31733544	G	A	SNP	VWA7	ENST00000375686	human	ensembl	74_37	-1	known	missense	c.2531	p.P844L	0.003	NULL	NULL	-	no_errors	VWA7	HGNC	ENSG00000204396				29	0	0	35	3	7.89474
EHMT2	0	genome.wustl.edu	37	6	31864759	31864759	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	31864759	31864759	G	T	SNP	EHMT2	ENST00000395728	human	ensembl	74_37	-1	known	missense	c.221	p.A74D	1.000	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT2	HGNC	ENSG00000204371				128	0	0	102	14	12.069
GPSM3	0	genome.wustl.edu	37	6	32159232	32159232	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	32159232	32159232	C	T	SNP	GPSM3	ENST00000375040	human	ensembl	74_37	-1	known	missense	c.394	p.G132R	1.000	smart_GoLoco_motif,pfscan_GoLoco_motif	pfam_GoLoco_motif,smart_GoLoco_motif,pfscan_GoLoco_motif	-	no_errors	GPSM3	HGNC	ENSG00000213654				129	0	0	68	30	30.6122
KIFC1	0	genome.wustl.edu	37	6	33374045	33374045	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	33374045	33374045	C	T	SNP	KIFC1	ENST00000428849	human	ensembl	74_37	+1	known	missense	c.1609	p.R537C	0.992	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIFC1	HGNC	ENSG00000237649				336	0	0	118	16	11.9403
DNAH8	0	genome.wustl.edu	37	6	38899592	38899592	+	Silent	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	38899592	38899592	A	G	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	silent	c.10629	p.K3543	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				156	0	0	67	43	39.0909
DAAM2	0	genome.wustl.edu	37	6	39869752	39869752	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	39869752	39869752	G	A	SNP	DAAM2	ENST00000274867	human	ensembl	74_37	+1	known	missense	c.3146	p.R1049Q	1.000	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DAAM2	HGNC	ENSG00000146122				68	0	0	28	4	12.5
PEX6	0	genome.wustl.edu	37	6	42941748	42941748	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	42941748	42941748	G	A	SNP	PEX6	ENST00000304611	human	ensembl	74_37	-1	known	silent	c.1123	p.L375	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	PEX6	HGNC	ENSG00000124587				73	0	0	25	13	34.2105
RREB1	0	genome.wustl.edu	37	6	7182219	7182219	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	7182219	7182219	G	A	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.75	p.M25I	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				149	0	0	100	18	15.2542
COL12A1	0	genome.wustl.edu	37	6	75798837	75798837	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	75798837	75798837	G	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.8995	p.L2999M	0.090	NULL	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				41	0	0	26	9	25.7143
ORC3	0	genome.wustl.edu	37	6	88376828	88376828	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	88376828	88376828	G	A	SNP	ORC3	ENST00000257789	human	ensembl	74_37	+1	known	nonsense	c.2126	p.W709*	1.000	NULL	pfam_ORC3	-	no_errors	ORC3	HGNC	ENSG00000135336				46	0	0	16	17	51.5152
NAT16	0	genome.wustl.edu	37	7	100816771	100816771	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	100816771	100816771	C	G	SNP	NAT16	ENST00000300303	human	ensembl	74_37	-1	known	missense	c.343	p.A115P	0.709	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAT16	HGNC	ENSG00000167011				51	0	0	18	9	33.3333
PPP1R3A	0	genome.wustl.edu	37	7	113519479	113519479	+	Silent	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	113519479	113519479	T	C	SNP	PPP1R3A	ENST00000284601	human	ensembl	74_37	-1	known	silent	c.1668	p.G556	0.004	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3A	HGNC	ENSG00000154415				93	0	0	64	27	29.6703
TMEM213	0	genome.wustl.edu	37	7	138522741	138522741	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	138522741	138522741	G	C	SNP	TMEM213	ENST00000413208	human	ensembl	74_37	+1	putative	missense	c.282	p.W94C	0.869	NULL	NULL	-	no_errors	TMEM213	HGNC	ENSG00000214128				32	0	0	33	3	8.33333
TMEM139	0	genome.wustl.edu	37	7	142983557	142983557	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	142983557	142983557	G	A	SNP	TMEM139	ENST00000359333	human	ensembl	74_37	+1	known	missense	c.286	p.V96M	0.000	NULL	NULL	-	no_errors	TMEM139	HGNC	ENSG00000178826				179	1	0.555556	93	8	7.92079
KMT2C	0	genome.wustl.edu	37	7	151835972	151835972	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	151835972	151835972	C	T	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	missense	c.14723	p.C4908Y	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				77	0	0	86	7	7.52688
FERD3L	0	genome.wustl.edu	37	7	19184535	19184535	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	19184535	19184535	A	G	SNP	FERD3L	ENST00000275461	human	ensembl	74_37	-1	known	missense	c.451	p.S151P	0.998	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	FERD3L	HGNC	ENSG00000146618				62	0	0	40	4	9.09091
ABCB5	0	genome.wustl.edu	37	7	20698214	20698214	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	20698214	20698214	G	A	SNP	ABCB5	ENST00000258738	human	ensembl	74_37	+1	known	missense	c.287	p.R96Q	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846				70	0	0	56	8	12.5
TRA2A	0	genome.wustl.edu	37	7	23556109	23556109	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	23556109	23556109	C	T	SNP	TRA2A	ENST00000297071	human	ensembl	74_37	-1	known	missense	c.209	p.R70Q	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TRA2A	HGNC	ENSG00000164548				65	0	0	68	9	11.6883
BMPER	0	genome.wustl.edu	37	7	34182863	34182863	+	Silent	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	34182863	34182863	T	C	SNP	BMPER	ENST00000297161	human	ensembl	74_37	+1	known	silent	c.1767	p.C589	0.991	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_VWF_C,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_C,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,pfscan_VWF_C	-	no_errors	BMPER	HGNC	ENSG00000164619				125	0	0	111	7	5.9322
ELMO1	0	genome.wustl.edu	37	7	36934570	36934570	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	36934570	36934570	C	G	SNP	ELMO1	ENST00000310758	human	ensembl	74_37	-1	known	missense	c.1490	p.S497T	1.000	NULL	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849				60	0	0	63	10	13.6986
SDK1	0	genome.wustl.edu	37	7	4008964	4008964	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	4008964	4008964	C	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.1622	p.A541V	0.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				331	0	0	186	74	28.4615
GLI3	0	genome.wustl.edu	37	7	42007505	42007505	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	42007505	42007505	G	C	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.2120	p.P707R	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				147	0	0	95	14	12.844
GLI3	0	genome.wustl.edu	37	7	42007506	42007506	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	42007506	42007506	G	T	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.2119	p.P707T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				145	0	0	96	13	11.9266
CAMK2B	0	genome.wustl.edu	37	7	44323802	44323802	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	44323802	44323802	G	A	SNP	CAMK2B	ENST00000395749	human	ensembl	74_37	-1	known	missense	c.88	p.R30C	0.997	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2B	HGNC	ENSG00000058404				45	0	0	15	7	31.8182
TNRC18	0	genome.wustl.edu	37	7	5363880	5363880	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	5363880	5363880	G	A	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	missense	c.6407	p.P2136L	0.983	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095				36	0	0	36	3	7.69231
FBXL18	0	genome.wustl.edu	37	7	5521433	5521433	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	5521433	5521433	G	A	SNP	FBXL18	ENST00000382368	human	ensembl	74_37	-1	known	silent	c.2130	p.A710	0.336	NULL	pfam_F-box_dom,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXL18	HGNC	ENSG00000155034				252	0	0	164	9	5.20231
CCZ1	0	genome.wustl.edu	37	7	5949682	5949682	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	5949682	5949682	G	A	SNP	CCZ1	ENST00000325974	human	ensembl	74_37	+1	known	missense	c.715	p.D239N	1.000	pfam_DUF1712_fun	pfam_DUF1712_fun	-	no_errors	CCZ1	HGNC	ENSG00000122674				34	0	0	21	19	47.5
ZNF736	0	genome.wustl.edu	37	7	63809447	63809447	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	63809447	63809447	T	A	SNP	ZNF736	ENST00000355095	human	ensembl	74_37	+1	known	nonsense	c.1206	p.C402*	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF736	HGNC	ENSG00000234444				30	0	0	3	2	40
ZNF117	0	genome.wustl.edu	37	7	64439222	64439222	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	64439222	64439222	G	A	SNP	ZNF117	ENST00000282869	human	ensembl	74_37	-1	known	missense	c.727	p.H243Y	0.990	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF117	HGNC	ENSG00000152926				72	0	0	75	5	6.25
CCZ1B	0	genome.wustl.edu	37	7	6854460	6854460	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	6854460	6854460	C	T	SNP	CCZ1B	ENST00000316731	human	ensembl	74_37	-1	known	missense	c.715	p.D239N	1.000	pfam_DUF1712_fun	pfam_DUF1712_fun	-	no_errors	CCZ1B	HGNC	ENSG00000146574				116	1	0.854701	107	9	7.75862
CLIP2	0	genome.wustl.edu	37	7	73790905	73790905	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	73790905	73790905	G	A	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	+1	known	missense	c.2174	p.R725H	0.698	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665				50	0	0	16	15	48.3871
PCLO	0	genome.wustl.edu	37	7	82764700	82764700	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	82764700	82764700	C	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.2166	p.Q722H	0.025	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				67	0	0	53	7	11.6667
PCLO	0	genome.wustl.edu	37	7	82784197	82784197	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	82784197	82784197	G	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.1760	p.T587S	1.000	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				402	0	0	280	23	7.59076
SEMA3D	0	genome.wustl.edu	37	7	84697592	84697592	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	84697592	84697592	T	C	SNP	SEMA3D	ENST00000284136	human	ensembl	74_37	-1	known	missense	c.504	p.I168M	0.001	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3D	HGNC	ENSG00000153993				56	0	0	49	4	7.54717
C7orf62	0	genome.wustl.edu	37	7	88424067	88424067	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	88424067	88424067	C	A	SNP	C7orf62	ENST00000297203	human	ensembl	74_37	-1	known	missense	c.190	p.D64Y	0.005	NULL	NULL	-	no_errors	C7orf62	HGNC	ENSG00000164645				76	0	0	80	25	23.8095
RIMS2	0	genome.wustl.edu	37	8	104898052	104898052	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	104898052	104898052	T	C	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	missense	c.1225	p.S409P	1.000	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406				65	0	0	88	28	24.1379
CSMD3	0	genome.wustl.edu	37	8	113933896	113933896	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	113933896	113933896	T	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.1593	p.E531D	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				65	0	0	85	5	5.55556
TRPS1	0	genome.wustl.edu	37	8	116599582	116599582	+	Silent	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	116599582	116599582	C	T	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	silent	c.2346	p.K782	0.995	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447				428	0	0	393	42	9.65517
ADCY8	0	genome.wustl.edu	37	8	131880177	131880177	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	131880177	131880177	C	T	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.2125	p.D709N	1.000	pfam_Adenylate_cyclase-like	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				39	0	0	56	4	6.66667
ADCY8	0	genome.wustl.edu	37	8	132052235	132052235	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	132052235	132052235	G	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	silent	c.345	p.S115	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				12	0	0	12	6	33.3333
TG	0	genome.wustl.edu	37	8	133925324	133925324	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	133925324	133925324	C	T	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.4192	p.R1398C	0.889	pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832				53	0	0	27	35	56.4516
TG	0	genome.wustl.edu	37	8	134042161	134042161	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	134042161	134042161	C	T	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.7132	p.R2378W	0.693	pfam_CarbesteraseB,pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832				79	0	0	66	24	26.6667
CYP11B1	0	genome.wustl.edu	37	8	143961216	143961216	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	143961216	143961216	G	T	SNP	CYP11B1	ENST00000292427	human	ensembl	74_37	-1	known	missense	c.14	p.A5E	0.013	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP11B1	HGNC	ENSG00000160882				237	0	0	125	43	25.5952
UBXN8	0	genome.wustl.edu	37	8	30623815	30623815	+	RNA	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	30623815	30623815	C	T	SNP	UBXN8	ENST00000265616	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.065	-	-	-	no_errors	UBXN8	HGNC	ENSG00000104691				34	0	0	35	4	10.2564
NRG1	0	genome.wustl.edu	37	8	32505683	32505683	+	Silent	SNP	T	T	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	32505683	32505683	T	G	SNP	NRG1	ENST00000520502	human	ensembl	74_37	+1	known	silent	c.447	p.S149	0.535	NULL	smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	NRG1	HGNC	ENSG00000157168				81	0	0	152	8	5
PREX2	0	genome.wustl.edu	37	8	69002817	69002817	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	69002817	69002817	C	G	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.2117	p.T706S	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889				46	0	0	85	5	5.55556
TERF1	0	genome.wustl.edu	37	8	73951418	73951418	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	73951418	73951418	G	A	SNP	TERF1	ENST00000276603	human	ensembl	74_37	+1	known	silent	c.1107	p.P369	0.000	pirsf_Telomere_repeat-bd-1/2	pfam_Telomere_rpt-bd_fac_dimer_dom,pfam_SANT/Myb,superfamily_Telomere_rpt-bd_fac_dimer_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pirsf_Telomere_repeat-bd-1/2,pfscan_Myb-like_dom	-	no_errors	TERF1	HGNC	ENSG00000147601				33	0	0	23	8	25.8065
ZFHX4	0	genome.wustl.edu	37	8	77766219	77766219	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	77766219	77766219	T	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.7062	p.D2354E	0.995	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				303	0	0	154	47	23.3831
ZFHX4	0	genome.wustl.edu	37	8	77766560	77766560	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	8	77766560	77766560	C	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.7403	p.T2468K	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				42	0	0	48	19	28.3582
GABBR2	0	genome.wustl.edu	37	9	101304173	101304173	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	9	101304173	101304173	G	A	SNP	GABBR2	ENST00000259455	human	ensembl	74_37	-1	known	silent	c.612	p.D204	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B2,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,prints_GPCR_3,pfscan_GPCR_3_C	-	no_errors	GABBR2	HGNC	ENSG00000136928				72	0	0	38	5	11.6279
USP20	0	genome.wustl.edu	37	9	132637006	132637006	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	9	132637006	132637006	C	T	SNP	USP20	ENST00000315480	human	ensembl	74_37	+1	known	missense	c.1892	p.S631L	0.999	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,pfam_Znf_UBP,smart_Znf_UBP,smart_Pept_C19_DUSP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP20	HGNC	ENSG00000136878				158	0	0	94	6	6
GLT6D1	0	genome.wustl.edu	37	9	138518015	138518015	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	9	138518015	138518015	C	G	SNP	GLT6D1	ENST00000371763	human	ensembl	74_37	-1	known	missense	c.157	p.A53P	0.987	pfam_Glyco_trans_6	pfam_Glyco_trans_6	-	no_errors	GLT6D1	HGNC	ENSG00000204007				111	1	0.892857	61	25	29.0698
SEC16A	0	genome.wustl.edu	37	9	139358985	139358985	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	9	139358985	139358985	A	T	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	missense	c.4333	p.F1445I	1.000	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396				128	0	0	79	13	14.1304
PNPLA7	0	genome.wustl.edu	37	9	140373543	140373543	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	9	140373543	140373543	G	A	SNP	PNPLA7	ENST00000406427	human	ensembl	74_37	-1	known	missense	c.2728	p.R910C	0.960	NULL	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA7	HGNC	ENSG00000130653				17	0	0	3	4	57.1429
IFNB1	0	genome.wustl.edu	37	9	21077644	21077644	+	Silent	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	9	21077644	21077644	G	A	SNP	IFNB1	ENST00000380232	human	ensembl	74_37	-1	known	silent	c.225	p.D75	0.000	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNB1	HGNC	ENSG00000171855				152	0	0	77	61	44.2029
GPRASP1	0	genome.wustl.edu	37	X	101912116	101912116	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	X	101912116	101912116	G	A	SNP	GPRASP1	ENST00000361600	human	ensembl	74_37	+1	known	missense	c.3275	p.S1092N	0.000	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP1	HGNC	ENSG00000198932				238	0	0	59	78	56.9343
IRS4	0	genome.wustl.edu	37	X	107975886	107975886	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	X	107975886	107975886	T	A	SNP	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	missense	c.3689	p.D1230V	0.833	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124				269	0	0	143	14	8.9172
IRS4	0	genome.wustl.edu	37	X	107978368	107978368	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	X	107978368	107978368	T	A	SNP	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	missense	c.1207	p.S403C	0.626	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124				138	0	0	76	10	11.6279
DCX	0	genome.wustl.edu	37	X	110576315	110576315	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	X	110576315	110576315	G	T	SNP	DCX	ENST00000338081	human	ensembl	74_37	-1	known	missense	c.1015	p.R339S	1.000	pfam_Doublecortin_dom,smart_Doublecortin_dom,pirsf_Doublecortin_chordata,pfscan_Doublecortin_dom	pfam_Doublecortin_dom,smart_Doublecortin_dom,pirsf_Doublecortin_chordata,pfscan_Doublecortin_dom	-	no_errors	DCX	HGNC	ENSG00000077279				47	0	0	25	3	10.7143
DDX26B	0	genome.wustl.edu	37	X	134681170	134681170	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	X	134681170	134681170	A	G	SNP	DDX26B	ENST00000370752	human	ensembl	74_37	+1	known	missense	c.722	p.D241G	1.000	NULL	pfscan_VWF_A	-	no_errors	DDX26B	HGNC	ENSG00000165359				133	0	0	50	71	58.6777
MCF2	0	genome.wustl.edu	37	X	138699694	138699694	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	X	138699694	138699694	T	A	SNP	MCF2	ENST00000370578	human	ensembl	74_37	-1	known	missense	c.1412	p.K471I	0.999	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2	HGNC	ENSG00000101977				131	0	0	31	67	68.3673
KDM5C	0	genome.wustl.edu	37	X	53230786	53230786	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	X	53230786	53230786	C	G	SNP	KDM5C	ENST00000375401	human	ensembl	74_37	-1	known	missense	c.2007	p.E669D	0.998	NULL	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_Znf_PHD-finger,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5C	HGNC	ENSG00000126012				109	0	0	53	4	7.01754
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037856	10037856	+	RNA	SNP	G	G	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	Y	10037856	10037856	G	A	SNP	RNA5-8SP6	ENST00000515896	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705				23	0	0	7	3	30
VSIG8	0	genome.wustl.edu	37	1	159825771	159825773	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	159825771	159825773	GCA	-	DEL	VSIG8	ENST00000368100	human	ensembl	74_37	-1	known	in_frame_del	c.873_871	p.C291in_frame_del	0.998:1.000:1.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	VSIG8	HGNC	ENSG00000243284				22	0	0	15	2	11.7647
ZMYM1	0	genome.wustl.edu	37	1	35563024	35563025	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	1	35563024	35563025	-	A	INS	ZMYM1	ENST00000359858	human	ensembl	74_37	+1	novel	frame_shift_ins	c.276_277	p.I94fs	1.000:1.000	pfam_Znf_MYM,smart_TRASH_dom	pfam_Znf_MYM,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_TRASH_dom	-	no_errors	ZMYM1	HGNC	ENSG00000197056				166	0	0	106	59	35.7576
MYO9A	0	genome.wustl.edu	37	15	72190282	72190283	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	15	72190282	72190283	TC	-	DEL	MYO9A	ENST00000424560	human	ensembl	74_37	-1	known	frame_shift_del	c.4562_4561	p.D1521fs	0.998:1.000	NULL	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9A	HGNC	ENSG00000066933				69	0	0	37	17	31.4815
GPATCH8	0	genome.wustl.edu	37	17	42478621	42478622	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	42478621	42478622	GC	-	DEL	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	frame_shift_del	c.824_823	p.A275fs	1.000:0.147	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566				154	0	0	94	48	33.8028
BCAS3	0	genome.wustl.edu	37	17	59465992	59465992	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	17	59465992	59465992	A	-	DEL	BCAS3	ENST00000589222	human	ensembl	74_37	+1	known	frame_shift_del	c.2673	p.K894fs	1.000	NULL	pfam_BCAS3,pfam_WD40_repeat	-	no_errors	BCAS3	HGNC	ENSG00000141376				12	0	0	3	3	50
YIPF2	0	genome.wustl.edu	37	19	11034677	11034678	+	Splice_Site	INS	-	-	G			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	11034677	11034678	-	G	INS	YIPF2	ENST00000253031	human	ensembl	74_37	-1	known	splice_site_ins	c.485-3_485-2	e6-2	1.000:0.994	-	-	-	no_errors	YIPF2	HGNC	ENSG00000130733				50	0	0	21	3	12.5
ZNF443	0	genome.wustl.edu	37	19	12542651	12542652	+	Frame_Shift_Ins	INS	-	-	TT			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	19	12542651	12542652	-	TT	INS	ZNF443	ENST00000301547	human	ensembl	74_37	-1	known	frame_shift_ins	c.335_334	p.V112fs	0.000:0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF443	HGNC	ENSG00000180855				77	0	0	61	8	11.5942
SCN3A	0	genome.wustl.edu	37	2	166003266	166003267	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	2	166003266	166003267	-	T	INS	SCN3A	ENST00000283254	human	ensembl	74_37	-1	known	frame_shift_ins	c.1654_1653	p.F551fs	0.953:0.777	pfam_DUF3451	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN3A	HGNC	ENSG00000153253				130	0	0	94	32	25.3968
RRBP1	0	genome.wustl.edu	37	20	17622545	17622546	+	Frame_Shift_Ins	INS	-	-	GGTC			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	20	17622545	17622546	-	GGTC	INS	RRBP1	ENST00000246043	human	ensembl	74_37	-1	known	frame_shift_ins	c.2081_2080	p.P694fs	1.000:1.000	NULL	pfam_Rib_rcpt_KP,superfamily_Ribosome_recyc_fac_dom	-	no_errors	RRBP1	HGNC	ENSG00000125844				218	0	0	120	24	16.6667
HIVEP2	0	genome.wustl.edu	37	6	143095414	143095415	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	6	143095414	143095415	-	T	INS	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	frame_shift_ins	c.462_461	p.I155fs	1.000:1.000	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818				177	0	0	143	40	21.8579
MAGI2	0	genome.wustl.edu	37	7	77762312	77762312	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	7	77762312	77762312	G	-	DEL	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	frame_shift_del	c.3097	p.L1033fs	0.000	NULL	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391				248	1	0.401606	130	64	32.9897
DAPK1	0	genome.wustl.edu	37	9	90312111	90312111	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	9	90312111	90312111	A	-	DEL	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	frame_shift_del	c.2603	p.E868fs	1.000	superfamily_P-loop_NTPase	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730				20	0	0	30	30	50
MAP7D3	0	genome.wustl.edu	37	X	135313186	135313186	+	RNA	DEL	T	T	-			TCGA-HU-A4GP-01A-11D-A25D-08	TCGA-HU-A4GP-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6c332efb-4379-400e-8210-632c08500d5d	b855c7e5-16d1-4e02-9862-69c37bf8f5b0	X	135313186	135313186	T	-	DEL	MAP7D3	ENST00000477124	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.018	-	-	-	no_errors	MAP7D3	HGNC	ENSG00000129680				30	0	0	27	4	12.9032
