Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
UBE4B	0	genome.wustl.edu	37	1	10231304	10231304	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	10231304	10231304	C	G	SNP	UBE4B	ENST00000343090	human	ensembl	74_37	+1	known	missense	c.3442	p.P1148A	1.000	pfam_Ub_conjug_fac_E4_core	pfam_Ub_conjug_fac_E4_core,pfam_Ubox_domain,smart_Ubox_domain	-	no_errors	UBE4B	HGNC	ENSG00000130939				203	0	0	90	63	41.1765
KIF1B	0	genome.wustl.edu	37	1	10355753	10355753	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	10355753	10355753	T	C	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	missense	c.1568	p.I523T	1.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				152	0	0	84	5	5.61798
PEX14	0	genome.wustl.edu	37	1	10690008	10690008	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	10690008	10690008	G	A	SNP	PEX14	ENST00000356607	human	ensembl	74_37	+1	known	silent	c.1098	p.R366	1.000	NULL	pfam_Pex14_N	-	no_errors	PEX14	HGNC	ENSG00000142655				74	0	0	44	6	12
ENSG00000272078	0	genome.wustl.edu	37	1	10713402	10713402	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	10713402	10713402	C	T	SNP	ENSG00000272078	ENST00000606802	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP4-734G22.3	Clone_based_vega_gene	ENSG00000272078				95	0	0	41	14	25.4545
SARS	0	genome.wustl.edu	37	1	109778615	109778615	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	109778615	109778615	A	G	SNP	SARS	ENST00000369923	human	ensembl	74_37	+1	known	missense	c.986	p.Y329C	1.000	pfam_aa-tRNA-synt_IIb_cons-dom,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,prints_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Ser-tRNA-synth_1_N,superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,prints_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	-	no_errors	SARS	HGNC	ENSG00000031698				78	0	0	60	5	7.69231
CELSR2	0	genome.wustl.edu	37	1	109795382	109795382	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	109795382	109795382	T	C	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	missense	c.2681	p.V894A	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126				108	0	0	79	26	24.7619
AMIGO1	0	genome.wustl.edu	37	1	110051154	110051154	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	110051154	110051154	C	T	SNP	AMIGO1	ENST00000369862	human	ensembl	74_37	-1	known	silent	c.381	p.E127	0.996	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_Ig_I-set,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	AMIGO1	HGNC	ENSG00000181754				124	0	0	72	18	20
KCNC4	0	genome.wustl.edu	37	1	110765982	110765982	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	110765982	110765982	A	G	SNP	KCNC4	ENST00000369787	human	ensembl	74_37	+1	known	missense	c.1075	p.K359E	1.000	pfam_Ion_trans_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_K_chnl_volt-dep_Kv3_ID,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.4,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC4	HGNC	ENSG00000116396				61	0	0	34	24	41.3793
TARDBP	0	genome.wustl.edu	37	1	11076929	11076929	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	11076929	11076929	T	C	SNP	TARDBP	ENST00000240185	human	ensembl	74_37	+1	known	silent	c.267	p.D89	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TARDBP	HGNC	ENSG00000120948				47	0	0	34	9	20.9302
KCNA3	0	genome.wustl.edu	37	1	111216001	111216001	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	111216001	111216001	G	A	SNP	KCNA3	ENST00000369769	human	ensembl	74_37	-1	known	silent	c.1431	p.P477	0.021	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.3,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA3	HGNC	ENSG00000177272				66	0	0	79	6	7.05882
TTLL10	0	genome.wustl.edu	37	1	1115538	1115538	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	1115538	1115538	T	C	SNP	TTLL10	ENST00000379289	human	ensembl	74_37	+1	known	silent	c.324	p.S108	0.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL10	HGNC	ENSG00000162571				22	0	0	12	11	47.8261
CHIAP2	0	genome.wustl.edu	37	1	111824383	111824383	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	111824383	111824383	C	T	SNP	CHIAP2	ENST00000369743	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CHIAP2	HGNC	ENSG00000203878				31	0	0	21	8	27.5862
PTPN22	0	genome.wustl.edu	37	1	114401660	114401660	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	114401660	114401660	A	G	SNP	PTPN22	ENST00000359785	human	ensembl	74_37	-1	known	silent	c.237	p.D79	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pirsf_Non-rcpt_Tyr_Pase_8/22,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Non-rcpt_Tyr_Pase_8/22,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN22	HGNC	ENSG00000134242				45	0	0	19	5	20.8333
PTCHD2	0	genome.wustl.edu	37	1	11580781	11580781	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	11580781	11580781	C	T	SNP	PTCHD2	ENST00000294484	human	ensembl	74_37	+1	known	silent	c.2238	p.F746	0.998	pfam_Patched	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	PTCHD2	HGNC	ENSG00000204624				85	0	0	34	19	35.8491
PTCHD2	0	genome.wustl.edu	37	1	11591751	11591751	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	11591751	11591751	C	T	SNP	PTCHD2	ENST00000294484	human	ensembl	74_37	+1	known	missense	c.3359	p.S1120F	1.000	NULL	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	PTCHD2	HGNC	ENSG00000204624				61	0	0	38	17	30.9091
ATP1A1	0	genome.wustl.edu	37	1	116935565	116935565	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	116935565	116935565	C	T	SNP	ATP1A1	ENST00000295598	human	ensembl	74_37	+1	known	silent	c.1422	p.Y474	0.025	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A1	HGNC	ENSG00000163399				128	0	0	60	43	41.7476
ATP1A1	0	genome.wustl.edu	37	1	116941581	116941581	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	116941581	116941581	T	C	SNP	ATP1A1	ENST00000295598	human	ensembl	74_37	+1	known	missense	c.2323	p.S775P	1.000	tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A1	HGNC	ENSG00000163399				135	0	0	67	20	22.9885
IGSF3	0	genome.wustl.edu	37	1	117127587	117127587	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	117127587	117127587	C	T	SNP	IGSF3	ENST00000318837	human	ensembl	74_37	-1	known	missense	c.2588	p.R863H	1.000	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF3	HGNC	ENSG00000143061				46	0	0	32	14	30.4348
CD101	0	genome.wustl.edu	37	1	117554394	117554394	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	117554394	117554394	G	A	SNP	CD101	ENST00000256652	human	ensembl	74_37	+1	known	missense	c.647	p.R216Q	1.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	CD101	HGNC	ENSG00000134256				50	0	0	23	16	41.0256
PLOD1	0	genome.wustl.edu	37	1	12012687	12012687	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	12012687	12012687	C	T	SNP	PLOD1	ENST00000376369	human	ensembl	74_37	+1	known	silent	c.615	p.I205	0.782	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD1	HGNC	ENSG00000083444				126	0	0	70	4	5.40541
AADACL3	0	genome.wustl.edu	37	1	12785194	12785194	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	12785194	12785194	G	A	SNP	AADACL3	ENST00000359318	human	ensembl	74_37	+1	known	missense	c.284	p.R95H	0.920	pfam_AB_hydrolase_3	pfam_AB_hydrolase_3	-	no_errors	AADACL3	HGNC	ENSG00000188984				143	1	0.694444	70	29	29.2929
VWA1	0	genome.wustl.edu	37	1	1372677	1372677	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	1372677	1372677	C	T	SNP	VWA1	ENST00000476993	human	ensembl	74_37	+1	known	silent	c.444	p.S148	0.221	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	VWA1	HGNC	ENSG00000179403				22	0	0	20	15	42.8571
PDPN	0	genome.wustl.edu	37	1	13910569	13910569	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	13910569	13910569	C	T	SNP	PDPN	ENST00000294489	human	ensembl	74_37	+1	known	missense	c.269	p.A90V	0.018	pfam_Podoplanin	pfam_Podoplanin	-	no_errors	PDPN	HGNC	ENSG00000162493				47	0	0	32	18	36
HFE2	0	genome.wustl.edu	37	1	145416863	145416863	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	145416863	145416863	T	C	SNP	HFE2	ENST00000336751	human	ensembl	74_37	+1	known	missense	c.1208	p.V403A	0.000	pfam_RGM_C	pfam_RGM_N,pfam_RGM_C	-	no_errors	HFE2	HGNC	ENSG00000168509				112	0	0	74	5	6.32911
PIAS3	0	genome.wustl.edu	37	1	145579269	145579269	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	145579269	145579269	C	A	SNP	PIAS3	ENST00000393045	human	ensembl	74_37	+1	known	silent	c.606	p.P202	0.994	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS3	HGNC	ENSG00000131788				152	0	0	97	59	37.8205
NBPF12	0	genome.wustl.edu	37	1	146400181	146400181	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	146400181	146400181	C	T	SNP	NBPF12	ENST00000442909	human	ensembl	74_37	+1	novel	silent	c.657	p.D219	0.000	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF12	HGNC	ENSG00000186275				27	0	0	38	19	33.3333
OTUD7B	0	genome.wustl.edu	37	1	149943026	149943026	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	149943026	149943026	C	T	SNP	OTUD7B	ENST00000369135	human	ensembl	74_37	-1	known	missense	c.239	p.R80Q	1.000	NULL	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7B	HGNC	ENSG00000163113				113	0	0	52	51	49.5146
PRPF3	0	genome.wustl.edu	37	1	150300845	150300845	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	150300845	150300845	C	T	SNP	PRPF3	ENST00000324862	human	ensembl	74_37	+1	known	missense	c.343	p.R115C	1.000	NULL	pfam_Pre-mRNA_splic_Prp3,pfam_DUF1115,pfam_PWI_dom,superfamily_PWI_dom,smart_PWI_dom	-	no_errors	PRPF3	HGNC	ENSG00000117360				241	1	0.413223	147	43	22.6316
TARS2	0	genome.wustl.edu	37	1	150476902	150476902	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	150476902	150476902	A	G	SNP	TARS2	ENST00000369064	human	ensembl	74_37	+1	known	missense	c.1709	p.Q570R	1.000	pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-ligase_IIa	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,pfscan_aa-tRNA-synth_II,prints_Thr-tRNA-ligase_IIa,tigrfam_Thr-tRNA-ligase_IIa	-	no_errors	TARS2	HGNC	ENSG00000143374				42	0	0	34	15	30.6122
MCL1	0	genome.wustl.edu	37	1	150549866	150549866	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	150549866	150549866	T	C	SNP	MCL1	ENST00000307940	human	ensembl	74_37	-1	known	missense	c.790	p.I264V	0.997	NULL	NULL	-	no_errors	MCL1	HGNC	ENSG00000143384				267	0	0	278	58	17.2619
SEMA6C	0	genome.wustl.edu	37	1	151105901	151105901	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	151105901	151105901	C	T	SNP	SEMA6C	ENST00000368913	human	ensembl	74_37	-1	known	missense	c.1948	p.A650T	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,pfscan_Semap_dom	-	no_errors	SEMA6C	HGNC	ENSG00000143434				18	0	0	13	14	51.8519
SELENBP1	0	genome.wustl.edu	37	1	151341935	151341935	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	151341935	151341935	A	G	SNP	SELENBP1	ENST00000426705	human	ensembl	74_37	-1	known	missense	c.283	p.S95P	1.000	pfam_Se-bd	pfam_Se-bd	-	no_errors	SELENBP1	HGNC	ENSG00000143416				22	0	0	28	11	28.2051
RORC	0	genome.wustl.edu	37	1	151783930	151783930	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	151783930	151783930	C	T	SNP	RORC	ENST00000480719	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.108	-	-	-	no_errors	RORC	HGNC	ENSG00000143365				28	0	0	10	5	33.3333
FLG	0	genome.wustl.edu	37	1	152279184	152279184	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	152279184	152279184	G	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	silent	c.8178	p.G2726	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				86	0	0	175	40	18.6047
TPM3	0	genome.wustl.edu	37	1	154130051	154130051	+	RNA	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	154130051	154130051	A	G	SNP	TPM3	ENST00000312970	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.756	-	-	-	no_errors	TPM3	HGNC	ENSG00000143549				108	0	0	122	32	20.7792
PBXIP1	0	genome.wustl.edu	37	1	154926189	154926189	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	154926189	154926189	G	T	SNP	PBXIP1	ENST00000539880	human	ensembl	74_37	-1	known	silent	c.9	p.S3	0.998	NULL	NULL	-	no_errors	PBXIP1	HGNC	ENSG00000163346				32	0	0	17	11	39.2857
ADAM15	0	genome.wustl.edu	37	1	155029473	155029473	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	155029473	155029473	T	C	SNP	ADAM15	ENST00000356955	human	ensembl	74_37	+1	known	silent	c.1044	p.H348	0.612	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B_N,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM15	HGNC	ENSG00000143537				100	0	0	78	20	20.4082
KRTCAP2	0	genome.wustl.edu	37	1	155145709	155145709	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	155145709	155145709	G	A	SNP	KRTCAP2	ENST00000295682	human	ensembl	74_37	-1	known	missense	c.70	p.R24W	0.000	NULL	pfam_Uncharacterised_KRTCAP2	-	no_errors	KRTCAP2	HGNC	ENSG00000163463				41	0	0	23	14	37.8378
RUSC1	0	genome.wustl.edu	37	1	155300268	155300268	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	155300268	155300268	G	A	SNP	RUSC1	ENST00000368352	human	ensembl	74_37	+1	known	missense	c.2615	p.R872H	0.977	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_Run,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC1	HGNC	ENSG00000160753				63	0	0	66	13	16.4557
ASH1L	0	genome.wustl.edu	37	1	155451418	155451418	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	155451418	155451418	C	A	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.1243	p.G415C	0.987	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				114	0	0	87	37	29.8387
YY1AP1	0	genome.wustl.edu	37	1	155630091	155630091	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	155630091	155630091	C	T	SNP	YY1AP1	ENST00000368339	human	ensembl	74_37	-1	known	missense	c.2024	p.R675K	0.139	NULL	NULL	-	no_errors	YY1AP1	HGNC	ENSG00000163374				133	0	0	119	57	32.3864
LAMTOR2	0	genome.wustl.edu	37	1	156024741	156024741	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	156024741	156024741	A	C	SNP	LAMTOR2	ENST00000368302	human	ensembl	74_37	+1	known	missense	c.61	p.S21R	1.000	pfam_Dynein_light-rel,smart_Dynein_light-rel	pfam_Dynein_light-rel,smart_Dynein_light-rel	-	no_errors	LAMTOR2	HGNC	ENSG00000116586				29	0	0	48	4	7.69231
CDK11B	0	genome.wustl.edu	37	1	1573143	1573143	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	1573143	1573143	G	T	SNP	CDK11B	ENST00000407249	human	ensembl	74_37	-1	known	missense	c.1454	p.P485H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK11B	HGNC	ENSG00000248333				272	1	0.3663	212	14	6.19469
CDK11B	0	genome.wustl.edu	37	1	1575717	1575717	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	1575717	1575717	C	A	SNP	CDK11B	ENST00000407249	human	ensembl	74_37	-1	known	missense	c.1181	p.G394V	0.983	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK11B	HGNC	ENSG00000248333				50	0	0	29	7	19.4444
KCNJ10	0	genome.wustl.edu	37	1	160011281	160011281	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	160011281	160011281	G	A	SNP	KCNJ10	ENST00000368089	human	ensembl	74_37	-1	known	missense	c.1042	p.R348C	0.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.2	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.2,prints_K_chnl_inward-rec_Kir1.1	-	no_errors	KCNJ10	HGNC	ENSG00000177807				51	0	0	49	20	28.9855
ITLN2	0	genome.wustl.edu	37	1	160915016	160915016	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	160915016	160915016	A	G	SNP	ITLN2	ENST00000368029	human	ensembl	74_37	-1	known	missense	c.892	p.F298L	0.996	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom	-	no_errors	ITLN2	HGNC	ENSG00000158764				62	0	0	16	21	56.7568
ADAMTS4	0	genome.wustl.edu	37	1	161163162	161163162	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	161163162	161163162	C	A	SNP	ADAMTS4	ENST00000367996	human	ensembl	74_37	-1	known	missense	c.1752	p.E584D	1.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS4	HGNC	ENSG00000158859				85	0	0	75	5	6.25
DDR2	0	genome.wustl.edu	37	1	162724999	162724999	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	162724999	162724999	G	A	SNP	DDR2	ENST00000367921	human	ensembl	74_37	+1	known	silent	c.471	p.P157	0.806	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DDR2	HGNC	ENSG00000162733				101	1	0.980392	72	19	20.8791
HSD17B7	0	genome.wustl.edu	37	1	162769541	162769541	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	162769541	162769541	A	G	SNP	HSD17B7	ENST00000254521	human	ensembl	74_37	+1	known	silent	c.456	p.E152	0.981	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH	-	no_errors	HSD17B7	HGNC	ENSG00000132196				61	0	0	21	3	12.5
RGS4	0	genome.wustl.edu	37	1	163042651	163042651	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	163042651	163042651	A	G	SNP	RGS4	ENST00000421743	human	ensembl	74_37	+1	known	missense	c.497	p.H166R	1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS4	HGNC	ENSG00000117152				49	0	0	21	11	34.375
SLC35E2	0	genome.wustl.edu	37	1	1663938	1663938	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	1663938	1663938	C	T	SNP	SLC35E2	ENST00000246421	human	ensembl	74_37	-1	known	missense	c.757	p.A253T	0.000	NULL	pfam_DMT	-	no_errors	SLC35E2	HGNC	ENSG00000215790				36	0	0	17	10	37.037
ADCY10	0	genome.wustl.edu	37	1	167823708	167823708	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	167823708	167823708	A	C	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	missense	c.2191	p.C731G	1.000	superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199				122	0	0	71	13	15.4762
ADCY10	0	genome.wustl.edu	37	1	167849742	167849742	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	167849742	167849742	C	A	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	missense	c.1126	p.V376F	0.912	pfam_A/G_cyclase,superfamily_A/G_cyclase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199				77	0	0	59	13	18.0556
XCL2	0	genome.wustl.edu	37	1	168511329	168511329	+	Silent	SNP	G	G	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	168511329	168511329	G	C	SNP	XCL2	ENST00000367819	human	ensembl	74_37	-1	known	silent	c.78	p.V26	0.340	superfamily_Chemokine_IL8-like_dom,prints_Chemokine_XCL1	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_XCL1	-	no_errors	XCL2	HGNC	ENSG00000143185				70	0	0	73	6	7.59494
PRRC2C	0	genome.wustl.edu	37	1	171510625	171510625	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	171510625	171510625	G	A	SNP	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	silent	c.4020	p.E1340	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523				23	0	0	37	4	9.7561
DNM3	0	genome.wustl.edu	37	1	171958183	171958183	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	171958183	171958183	C	T	SNP	DNM3	ENST00000358155	human	ensembl	74_37	+1	known	nonsense	c.484	p.Q162*	1.000	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_Dynamin_GTPase	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM3	HGNC	ENSG00000197959				34	0	0	19	2	9.52381
ATP13A2	0	genome.wustl.edu	37	1	17318615	17318615	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	17318615	17318615	T	C	SNP	ATP13A2	ENST00000326735	human	ensembl	74_37	-1	known	missense	c.2015	p.D672G	0.883	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A2	HGNC	ENSG00000159363				123	0	0	83	6	6.74157
TNN	0	genome.wustl.edu	37	1	175092640	175092640	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	175092640	175092640	T	C	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	missense	c.2755	p.Y919H	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332				80	0	0	111	18	13.9535
BRINP2	0	genome.wustl.edu	37	1	177245416	177245416	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	177245416	177245416	T	C	SNP	BRINP2	ENST00000361539	human	ensembl	74_37	+1	known	silent	c.858	p.G286	0.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP2	HGNC	ENSG00000198797				47	0	0	47	14	22.9508
STX6	0	genome.wustl.edu	37	1	180953905	180953905	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	180953905	180953905	A	G	SNP	STX6	ENST00000258301	human	ensembl	74_37	-1	known	missense	c.599	p.M200T	1.000	pfam_T_SNARE_dom,smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_Syntaxin-6_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX6	HGNC	ENSG00000135823				43	0	0	15	18	54.5455
CACNA1E	0	genome.wustl.edu	37	1	181693655	181693655	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	181693655	181693655	C	T	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	silent	c.2124	p.N708	0.998	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216				29	0	0	18	6	25
CACNA1E	0	genome.wustl.edu	37	1	181695292	181695292	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	181695292	181695292	C	T	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	missense	c.2234	p.S745L	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216				27	0	0	21	15	41.6667
NMNAT2	0	genome.wustl.edu	37	1	183221759	183221759	+	RNA	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	183221759	183221759	C	A	SNP	NMNAT2	ENST00000464047	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	NMNAT2	HGNC	ENSG00000157064				171	0	0	101	48	32.2148
SWT1	0	genome.wustl.edu	37	1	185200810	185200810	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	185200810	185200810	C	T	SNP	SWT1	ENST00000367500	human	ensembl	74_37	+1	known	missense	c.2411	p.A804V	1.000	NULL	smart_PIN_dom	-	no_errors	SWT1	HGNC	ENSG00000116668				104	0	0	47	11	18.9655
PRG4	0	genome.wustl.edu	37	1	186276262	186276262	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	186276262	186276262	A	C	SNP	PRG4	ENST00000445192	human	ensembl	74_37	+1	known	missense	c.1411	p.T471P	0.000	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690				73	0	0	222	24	9.7561
PRG4	0	genome.wustl.edu	37	1	186276739	186276739	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	186276739	186276739	G	A	SNP	PRG4	ENST00000445192	human	ensembl	74_37	+1	known	missense	c.1888	p.E630K	0.000	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690				27	0	0	80	11	12.0879
PRG4	0	genome.wustl.edu	37	1	186276818	186276818	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	186276818	186276818	C	T	SNP	PRG4	ENST00000445192	human	ensembl	74_37	+1	known	missense	c.1967	p.P656L	0.000	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690				48	0	0	108	11	9.2437
TPR	0	genome.wustl.edu	37	1	186301402	186301402	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	186301402	186301402	T	C	SNP	TPR	ENST00000367478	human	ensembl	74_37	-1	known	silent	c.5529	p.S1843	0.993	NULL	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC	ENSG00000047410				91	0	0	70	19	21.3483
TAS1R2	0	genome.wustl.edu	37	1	19166440	19166440	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	19166440	19166440	G	A	SNP	TAS1R2	ENST00000375371	human	ensembl	74_37	-1	novel	missense	c.2173	p.R725C	0.100	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	TAS1R2	HGNC	ENSG00000179002				66	0	0	40	23	36.5079
TROVE2	0	genome.wustl.edu	37	1	193051754	193051754	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	193051754	193051754	T	C	SNP	TROVE2	ENST00000367441	human	ensembl	74_37	+1	known	silent	c.1380	p.P460	1.000	NULL	pfam_TROVE,pfscan_TROVE	-	no_errors	TROVE2	HGNC	ENSG00000116747				58	0	0	38	13	25.4902
EMC1	0	genome.wustl.edu	37	1	19549207	19549207	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	19549207	19549207	A	G	SNP	EMC1	ENST00000477853	human	ensembl	74_37	-1	known	missense	c.2498	p.V833A	1.000	pfam_DUF1620	pfam_DUF1620,superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	EMC1	HGNC	ENSG00000127463				93	0	0	56	18	24.3243
AKR7L	0	genome.wustl.edu	37	1	19593919	19593919	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	19593919	19593919	T	C	SNP	AKR7L	ENST00000420396	human	ensembl	74_37	-1	known	missense	c.337	p.S113G	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	-	no_errors	AKR7L	HGNC	ENSG00000211454				95	0	0	50	11	18.0328
AKR7A3	0	genome.wustl.edu	37	1	19612726	19612726	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	19612726	19612726	T	C	SNP	AKR7A3	ENST00000361640	human	ensembl	74_37	-1	known	missense	c.355	p.T119A	0.990	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	-	no_errors	AKR7A3	HGNC	ENSG00000162482				113	0	0	99	8	7.47664
CFH	0	genome.wustl.edu	37	1	196709878	196709878	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	196709878	196709878	C	T	SNP	CFH	ENST00000367429	human	ensembl	74_37	+1	known	missense	c.2912	p.A971V	0.008	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971				125	1	0.793651	67	17	20.2381
ASPM	0	genome.wustl.edu	37	1	197073298	197073298	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	197073298	197073298	G	A	SNP	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	missense	c.5083	p.R1695C	0.043	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279				56	0	0	45	17	27.4194
ELF3	0	genome.wustl.edu	37	1	201984387	201984387	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	201984387	201984387	T	C	SNP	ELF3	ENST00000359651	human	ensembl	74_37	+1	known	missense	c.1052	p.V351A	1.000	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELF3	HGNC	ENSG00000163435				105	0	0	66	37	35.9223
PLA2G2A	0	genome.wustl.edu	37	1	20304571	20304571	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	20304571	20304571	G	A	SNP	PLA2G2A	ENST00000375111	human	ensembl	74_37	-1	known	missense	c.229	p.R77C	0.000	pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom	pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom,prints_PLipase_A2	-	no_errors	PLA2G2A	HGNC	ENSG00000188257				89	0	0	54	31	36.4706
SNRPE	0	genome.wustl.edu	37	1	203830839	203830839	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	203830839	203830839	A	G	SNP	SNRPE	ENST00000414487	human	ensembl	74_37	+1	known	missense	c.52	p.I18V	1.000	superfamily_LSM_dom	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	-	no_errors	SNRPE	HGNC	ENSG00000182004				67	0	0	61	4	6.15385
SOX13	0	genome.wustl.edu	37	1	204092326	204092326	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	204092326	204092326	C	T	SNP	SOX13	ENST00000367204	human	ensembl	74_37	+1	known	silent	c.1221	p.C407	0.108	superfamily_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX13	HGNC	ENSG00000143842				197	0	0	128	63	32.9843
UBXN10	0	genome.wustl.edu	37	1	20517794	20517794	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	20517794	20517794	C	A	SNP	UBXN10	ENST00000375099	human	ensembl	74_37	+1	known	missense	c.740	p.P247H	1.000	pfam_UBX,smart_UBX,pfscan_UBX	pfam_UBX,smart_UBX,pfscan_UBX	-	no_errors	UBXN10	HGNC	ENSG00000162543				105	0	0	88	25	22.1239
TMCC2	0	genome.wustl.edu	37	1	205241235	205241235	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	205241235	205241235	G	A	SNP	TMCC2	ENST00000358024	human	ensembl	74_37	+1	known	missense	c.2113	p.V705M	1.000	NULL	pfam_Predicted_TM_coiled-coil_2,superfamily_t-SNARE	-	no_errors	TMCC2	HGNC	ENSG00000133069				90	0	0	64	55	46.2185
C1orf74	0	genome.wustl.edu	37	1	209956976	209956976	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	209956976	209956976	A	G	SNP	C1orf74	ENST00000294811	human	ensembl	74_37	-1	known	silent	c.4	p.L2	0.003	NULL	NULL	-	no_errors	C1orf74	HGNC	ENSG00000162757				99	0	0	110	9	7.56303
KCNH1	0	genome.wustl.edu	37	1	210971048	210971048	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	210971048	210971048	G	A	SNP	KCNH1	ENST00000271751	human	ensembl	74_37	-1	known	missense	c.1717	p.R573C	1.000	superfamily_cNMP-bd-like	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH1	HGNC	ENSG00000143473				69	0	0	65	14	17.7215
C1orf86	0	genome.wustl.edu	37	1	2125206	2125206	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	2125206	2125206	G	A	SNP	C1orf86	ENST00000378543	human	ensembl	74_37	-1	putative	missense	c.206	p.P69L	0.000	NULL	NULL	-	no_errors	C1orf86	HGNC	ENSG00000162585				44	0	0	57	6	9.52381
USH2A	0	genome.wustl.edu	37	1	216251649	216251649	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	216251649	216251649	G	C	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.5354	p.T1785R	0.050	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Laminin_G,pfscan_Laminin_G	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				407	1	0.245098	182	180	49.7238
HSPG2	0	genome.wustl.edu	37	1	22178356	22178356	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	22178356	22178356	G	A	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.6934	p.R2312W	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				29	0	0	30	8	21.0526
MIA3	0	genome.wustl.edu	37	1	222803243	222803243	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	222803243	222803243	C	G	SNP	MIA3	ENST00000344441	human	ensembl	74_37	+1	known	missense	c.2681	p.S894C	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain	-	no_errors	MIA3	HGNC	ENSG00000154305				54	0	0	44	15	25.4237
CELA3B	0	genome.wustl.edu	37	1	22304927	22304927	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	22304927	22304927	C	T	SNP	CELA3B	ENST00000337107	human	ensembl	74_37	+1	known	missense	c.109	p.P37S	0.936	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	CELA3B	HGNC	ENSG00000219073				103	0	0	64	4	5.88235
TLR5	0	genome.wustl.edu	37	1	223284008	223284008	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	223284008	223284008	A	G	SNP	TLR5	ENST00000342210	human	ensembl	74_37	-1	known	missense	c.2366	p.M789T	1.000	pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR5	HGNC	ENSG00000187554				73	0	0	65	19	22.619
WDR26	0	genome.wustl.edu	37	1	224581610	224581610	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	224581610	224581610	G	A	SNP	WDR26	ENST00000414423	human	ensembl	74_37	-1	known	missense	c.1880	p.S627F	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_CTLH_C,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_CTLH_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR26	HGNC	ENSG00000162923				89	0	0	45	24	34.7826
DNAH14	0	genome.wustl.edu	37	1	225155170	225155170	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	225155170	225155170	T	C	SNP	DNAH14	ENST00000430092	human	ensembl	74_37	+1	known	missense	c.536	p.L179P	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842				173	0	0	104	7	6.30631
LBR	0	genome.wustl.edu	37	1	225592396	225592396	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	225592396	225592396	A	G	SNP	LBR	ENST00000272163	human	ensembl	74_37	-1	known	missense	c.1496	p.V499A	1.000	pfam_Ergosterol_biosynth_ERG4_ERG24,pfam_DUF1295	pfam_Ergosterol_biosynth_ERG4_ERG24,pfam_Lamin-B_rcpt_of_tudor,pfam_DUF1295,smart_Tudor	-	no_errors	LBR	HGNC	ENSG00000143815				42	0	0	16	21	56.7568
ITPKB	0	genome.wustl.edu	37	1	226923439	226923439	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	226923439	226923439	A	G	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	missense	c.1721	p.M574T	0.850	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772				43	0	0	39	21	35
OBSCN	0	genome.wustl.edu	37	1	228407137	228407137	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	228407137	228407137	G	A	SNP	OBSCN	ENST00000570156	human	ensembl	74_37	+1	putative	silent	c.2766	p.T922	0.919	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				35	0	0	76	17	18.2796
OBSCN	0	genome.wustl.edu	37	1	228547510	228547510	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	228547510	228547510	C	T	SNP	OBSCN	ENST00000366709	human	ensembl	74_37	+1	known	missense	c.10274	p.T3425M	0.997	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_DH-domain,pfam_Fibronectin_type3,pfam_IQ_motif_EF-hand-BS,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				17	0	0	10	7	41.1765
SIPA1L2	0	genome.wustl.edu	37	1	232649831	232649831	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	232649831	232649831	C	T	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.1255	p.E419K	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				272	0	0	188	70	27.1318
KIAA1804	0	genome.wustl.edu	37	1	233514953	233514953	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	233514953	233514953	C	T	SNP	KIAA1804	ENST00000366624	human	ensembl	74_37	+1	known	missense	c.2201	p.A734V	0.952	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674				79	0	0	131	9	6.42857
LYST	0	genome.wustl.edu	37	1	235971943	235971943	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	235971943	235971943	A	G	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	silent	c.2175	p.V725	0.540	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669				32	0	0	21	23	52.2727
HEATR1	0	genome.wustl.edu	37	1	236749213	236749213	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	236749213	236749213	C	T	SNP	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	silent	c.1956	p.K652	0.342	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285				51	0	0	32	4	11.1111
FMN2	0	genome.wustl.edu	37	1	240256760	240256760	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	240256760	240256760	C	A	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.1351	p.L451M	0.006	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				97	0	0	85	7	7.6087
FMN2	0	genome.wustl.edu	37	1	240286560	240286560	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	240286560	240286560	T	C	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.1697	p.I566T	0.995	pfscan_DEP_dom	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				90	0	0	88	9	9.27835
FMN2	0	genome.wustl.edu	37	1	240371405	240371405	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	240371405	240371405	C	A	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.3293	p.P1098H	0.497	pfam_Formin_homology_1,smart_FH2_Formin	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				39	0	0	27	2	6.89655
EXO1	0	genome.wustl.edu	37	1	242042481	242042481	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	242042481	242042481	T	C	SNP	EXO1	ENST00000348581	human	ensembl	74_37	+1	known	missense	c.1945	p.S649P	0.002	NULL	pfam_XPG-I_dom,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	EXO1	HGNC	ENSG00000174371				77	0	0	63	4	5.97015
NLRP3	0	genome.wustl.edu	37	1	247587785	247587785	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	247587785	247587785	T	G	SNP	NLRP3	ENST00000336119	human	ensembl	74_37	+1	known	missense	c.1040	p.L347R	0.999	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711				123	0	0	104	19	15.4472
NIPAL3	0	genome.wustl.edu	37	1	24782721	24782721	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	24782721	24782721	T	C	SNP	NIPAL3	ENST00000374399	human	ensembl	74_37	+1	known	missense	c.731	p.V244A	1.000	pfam_Mg_trans_NIPA	pfam_Mg_trans_NIPA	-	no_errors	NIPAL3	HGNC	ENSG00000001461				548	0	0	354	90	20.2703
OR14C36	0	genome.wustl.edu	37	1	248512652	248512652	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	248512652	248512652	C	T	SNP	OR14C36	ENST00000317861	human	ensembl	74_37	+1	known	silent	c.576	p.S192	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14C36	HGNC	ENSG00000177174				84	0	0	42	38	47.5
OR2T4	0	genome.wustl.edu	37	1	248525674	248525674	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	248525674	248525674	G	T	SNP	OR2T4	ENST00000366475	human	ensembl	74_37	+1	known	missense	c.792	p.E264D	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T4	HGNC	ENSG00000196944				128	0	0	115	11	8.73016
SRRM1	0	genome.wustl.edu	37	1	24979063	24979063	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	24979063	24979063	G	A	SNP	SRRM1	ENST00000447431	human	ensembl	74_37	+1	known	silent	c.864	p.T288	0.058	NULL	pfam_PWI_dom,superfamily_PWI_dom,smart_PWI_dom	-	no_errors	SRRM1	HGNC	ENSG00000133226				39	0	0	26	7	21.2121
GPATCH3	0	genome.wustl.edu	37	1	27223980	27223980	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	27223980	27223980	G	T	SNP	GPATCH3	ENST00000361720	human	ensembl	74_37	-1	known	silent	c.688	p.R230	1.000	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH3	HGNC	ENSG00000198746				160	0	0	153	13	7.83133
WDTC1	0	genome.wustl.edu	37	1	27631505	27631505	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	27631505	27631505	A	G	SNP	WDTC1	ENST00000319394	human	ensembl	74_37	+1	known	missense	c.1657	p.I553V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784				46	0	0	33	7	17.5
SYTL1	0	genome.wustl.edu	37	1	27677481	27677481	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	27677481	27677481	G	A	SNP	SYTL1	ENST00000490170	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SYTL1	HGNC	ENSG00000142765				24	0	0	12	19	61.2903
AHDC1	0	genome.wustl.edu	37	1	27878317	27878317	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	27878317	27878317	C	T	SNP	AHDC1	ENST00000247087	human	ensembl	74_37	-1	known	missense	c.310	p.G104S	0.757	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705				180	0	0	144	75	34.2466
YTHDF2	0	genome.wustl.edu	37	1	29070128	29070128	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	29070128	29070128	T	C	SNP	YTHDF2	ENST00000373812	human	ensembl	74_37	+1	known	missense	c.1346	p.M449T	1.000	pfscan_YTH_domain	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDF2	HGNC	ENSG00000198492				62	0	0	42	31	42.4658
PEF1	0	genome.wustl.edu	37	1	32096158	32096158	+	RNA	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	32096158	32096158	A	G	SNP	PEF1	ENST00000461006	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.095	-	-	-	no_errors	PEF1	HGNC	ENSG00000162517				13	0	0	13	3	18.75
SPOCD1	0	genome.wustl.edu	37	1	32256815	32256815	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	32256815	32256815	G	A	SNP	SPOCD1	ENST00000360482	human	ensembl	74_37	-1	known	silent	c.3040	p.L1014	1.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,superfamily_TFIIS_cen_dom,smart_TFS2M	-	no_errors	SPOCD1	HGNC	ENSG00000134668				32	0	0	10	9	47.3684
SPOCD1	0	genome.wustl.edu	37	1	32259828	32259828	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	32259828	32259828	C	A	SNP	SPOCD1	ENST00000360482	human	ensembl	74_37	-1	known	missense	c.2280	p.Q760H	0.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,superfamily_TFIIS_cen_dom,smart_TFS2M	-	no_errors	SPOCD1	HGNC	ENSG00000134668				45	0	0	33	21	38.8889
YARS	0	genome.wustl.edu	37	1	33245788	33245788	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	33245788	33245788	G	A	SNP	YARS	ENST00000373477	human	ensembl	74_37	-1	known	missense	c.1232	p.P411L	1.000	pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold,pfscan_tRNA-bd_dom	pfam_aa-tRNA-synth_Ic,pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold,prints_Tyr-tRNA-ligase,pfscan_tRNA-bd_dom,tigrfam_Tyr-tRNA-ligase	-	no_errors	YARS	HGNC	ENSG00000134684				248	0	0	118	81	40.7035
ADC	0	genome.wustl.edu	37	1	33548004	33548004	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	33548004	33548004	G	A	SNP	ADC	ENST00000475935	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	ADC	HGNC	ENSG00000142920				14	0	0	13	8	38.0952
CSMD2	0	genome.wustl.edu	37	1	34038130	34038130	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	34038130	34038130	G	A	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.7738	p.R2580C	0.020	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904				156	0	0	120	12	9.09091
DLGAP3	0	genome.wustl.edu	37	1	35370000	35370000	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	35370000	35370000	G	A	SNP	DLGAP3	ENST00000235180	human	ensembl	74_37	-1	known	nonsense	c.985	p.R329*	1.000	NULL	pfam_GKAP	-	no_errors	DLGAP3	HGNC	ENSG00000116544				98	0	0	42	33	44
ZMYM6	0	genome.wustl.edu	37	1	35457859	35457859	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	35457859	35457859	T	C	SNP	ZMYM6	ENST00000357182	human	ensembl	74_37	-1	known	missense	c.2122	p.T708A	0.981	NULL	pfam_Znf_MYM,superfamily_RNaseH-like_dom,smart_TRASH_dom	-	no_errors	ZMYM6	HGNC	ENSG00000163867				96	0	0	54	32	37.2093
HEYL	0	genome.wustl.edu	37	1	40092677	40092677	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	40092677	40092677	C	T	SNP	HEYL	ENST00000372852	human	ensembl	74_37	-1	known	silent	c.489	p.S163	0.000	NULL	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,smart_Orange_subgr,pfscan_Orange,pfscan_bHLH_dom	-	no_errors	HEYL	HGNC	ENSG00000163909				72	0	0	58	4	6.45161
NT5C1A	0	genome.wustl.edu	37	1	40129045	40129045	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	40129045	40129045	G	T	SNP	NT5C1A	ENST00000235628	human	ensembl	74_37	-1	known	silent	c.495	p.A165	1.000	pfam_5-nucleotidase	pfam_5-nucleotidase	-	no_errors	NT5C1A	HGNC	ENSG00000116981				62	0	0	42	17	28.8136
PPIE	0	genome.wustl.edu	37	1	40205879	40205879	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	40205879	40205879	C	T	SNP	PPIE	ENST00000324379	human	ensembl	74_37	+1	known	missense	c.74	p.A25V	1.000	pfam_RRM_dom,smart_RRM_dom,pirsf_Cyclophilin-type_PPIase_E,pfscan_RRM_dom	pfam_Cyclophilin-like_PPIase_dom,pfam_RRM_dom,superfamily_Cyclophilin-like_PPIase_dom,smart_RRM_dom,pirsf_Cyclophilin-type_PPIase_E,pfscan_RRM_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIE	HGNC	ENSG00000084072				80	0	0	44	7	13.7255
TIE1	0	genome.wustl.edu	37	1	43773243	43773243	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	43773243	43773243	G	T	SNP	TIE1	ENST00000372476	human	ensembl	74_37	+1	known	missense	c.913	p.A305S	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TIE1	HGNC	ENSG00000066056				92	0	0	49	27	35.5263
TIE1	0	genome.wustl.edu	37	1	43778821	43778821	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	43778821	43778821	G	A	SNP	TIE1	ENST00000372476	human	ensembl	74_37	+1	known	missense	c.1943	p.R648Q	0.195	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TIE1	HGNC	ENSG00000066056				81	0	0	34	31	47.6923
DMAP1	0	genome.wustl.edu	37	1	44684864	44684864	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	44684864	44684864	G	A	SNP	DMAP1	ENST00000315913	human	ensembl	74_37	+1	known	missense	c.857	p.R286H	1.000	pfam_DMAP1	pfam_DMAP1,superfamily_Homeodomain-like	-	no_errors	DMAP1	HGNC	ENSG00000178028				65	0	0	46	38	45.2381
RPS8	0	genome.wustl.edu	37	1	45241663	45241663	+	RNA	SNP	G	G	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	45241663	45241663	G	C	SNP	RPS8	ENST00000485390	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RPS8	HGNC	ENSG00000142937				39	0	0	29	18	38.2979
EIF2B3	0	genome.wustl.edu	37	1	45345566	45345566	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	45345566	45345566	C	T	SNP	EIF2B3	ENST00000360403	human	ensembl	74_37	-1	known	missense	c.899	p.C300Y	1.000	NULL	pfam_NTP_transferase	-	no_errors	EIF2B3	HGNC	ENSG00000070785				77	0	0	36	21	36.8421
GPBP1L1	0	genome.wustl.edu	37	1	46121139	46121139	+	RNA	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	46121139	46121139	C	A	SNP	GPBP1L1	ENST00000496278	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPBP1L1	HGNC	ENSG00000159592				12	0	0	10	8	44.4444
LRRC41	0	genome.wustl.edu	37	1	46745947	46745947	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	46745947	46745947	A	G	SNP	LRRC41	ENST00000343304	human	ensembl	74_37	-1	known	missense	c.1937	p.L646P	0.993	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC41	HGNC	ENSG00000132128				104	0	0	73	29	28.4314
MKNK1	0	genome.wustl.edu	37	1	47030770	47030770	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	47030770	47030770	A	G	SNP	MKNK1	ENST00000371946	human	ensembl	74_37	-1	known	silent	c.711	p.S237	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MKNK1	HGNC	ENSG00000079277				260	0	0	177	15	7.8125
CYP4B1	0	genome.wustl.edu	37	1	47284440	47284440	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	47284440	47284440	G	A	SNP	CYP4B1	ENST00000371923	human	ensembl	74_37	+1	known	missense	c.1493	p.G498D	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4B1	HGNC	ENSG00000142973				141	1	0.704225	86	21	19.6262
SLC5A9	0	genome.wustl.edu	37	1	48708212	48708212	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	48708212	48708212	C	T	SNP	SLC5A9	ENST00000236495	human	ensembl	74_37	+1	known	silent	c.1836	p.S612	0.000	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A9	HGNC	ENSG00000117834				69	0	0	36	30	45.4545
ZCCHC11	0	genome.wustl.edu	37	1	52956410	52956410	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	52956410	52956410	C	T	SNP	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	missense	c.1382	p.R461Q	0.983	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744				42	0	0	10	7	41.1765
ZYG11B	0	genome.wustl.edu	37	1	53279364	53279364	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	53279364	53279364	A	G	SNP	ZYG11B	ENST00000294353	human	ensembl	74_37	+1	known	missense	c.1852	p.T618A	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	ZYG11B	HGNC	ENSG00000162378				146	0	0	86	5	5.49451
SCP2	0	genome.wustl.edu	37	1	53446143	53446143	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	53446143	53446143	G	A	SNP	SCP2	ENST00000371514	human	ensembl	74_37	+1	known	missense	c.901	p.V301I	1.000	pfam_Thiolase_C,superfamily_Thiolase-like	pfam_SCP2_sterol-bd_dom,pfam_Thiolase_C,pfam_Thiolase_N,superfamily_Thiolase-like,superfamily_SCP2_sterol-bd_dom	-	no_errors	SCP2	HGNC	ENSG00000116171				121	0	0	69	4	5.47945
SSBP3	0	genome.wustl.edu	37	1	54870568	54870568	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	54870568	54870568	A	G	SNP	SSBP3	ENST00000371320	human	ensembl	74_37	-1	known	missense	c.92	p.V31A	0.997	smart_LisH_dimerisation,pfscan_LisH_dimerisation,prints_SSDP_DNA-bd	smart_LisH_dimerisation,pfscan_LisH_dimerisation,prints_SSDP_DNA-bd	-	no_errors	SSBP3	HGNC	ENSG00000157216				42	0	0	41	5	10.8696
C1orf177	0	genome.wustl.edu	37	1	55273679	55273679	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	55273679	55273679	A	G	SNP	C1orf177	ENST00000371273	human	ensembl	74_37	+1	known	missense	c.475	p.T159A	0.006	NULL	NULL	-	no_errors	C1orf177	HGNC	ENSG00000162398				102	0	0	57	39	40.625
NFIA	0	genome.wustl.edu	37	1	61848996	61848996	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	61848996	61848996	C	T	SNP	NFIA	ENST00000371189	human	ensembl	74_37	+1	known	missense	c.1169	p.A390V	0.999	pfam_CTF/NFI	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIA	HGNC	ENSG00000162599				288	0	0	162	45	21.7391
ICMT	0	genome.wustl.edu	37	1	6294985	6294985	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	6294985	6294985	A	G	SNP	ICMT	ENST00000343813	human	ensembl	74_37	-1	known	missense	c.245	p.L82P	1.000	NULL	pfam_ICMT_MeTrfase	-	no_errors	ICMT	HGNC	ENSG00000116237				115	0	0	107	19	15.0794
ROR1	0	genome.wustl.edu	37	1	64608132	64608132	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	64608132	64608132	G	A	SNP	ROR1	ENST00000371079	human	ensembl	74_37	+1	known	missense	c.973	p.V325I	1.000	pirsf_Tyr_kinase_rcpt_ROR,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR1	HGNC	ENSG00000185483				90	0	0	40	34	45.9459
LEPR	0	genome.wustl.edu	37	1	66081741	66081741	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	66081741	66081741	C	T	SNP	LEPR	ENST00000349533	human	ensembl	74_37	+1	known	silent	c.2046	p.N682	0.069	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_IgC2-like_lig-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LEPR	HGNC	ENSG00000116678				112	0	0	41	26	38.806
DNAJC11	0	genome.wustl.edu	37	1	6704704	6704704	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	6704704	6704704	G	A	SNP	DNAJC11	ENST00000377577	human	ensembl	74_37	-1	known	silent	c.1011	p.Y337	0.710	NULL	pfam_DnaJ-like_C11_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC11	HGNC	ENSG00000007923				90	0	0	63	25	28.4091
ZZZ3	0	genome.wustl.edu	37	1	78098156	78098156	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	78098156	78098156	A	G	SNP	ZZZ3	ENST00000370801	human	ensembl	74_37	-1	known	missense	c.884	p.L295P	1.000	NULL	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	ZZZ3	HGNC	ENSG00000036549				96	0	0	75	4	5.06329
SYDE2	0	genome.wustl.edu	37	1	85666014	85666014	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	85666014	85666014	G	T	SNP	SYDE2	ENST00000341460	human	ensembl	74_37	-1	known	silent	c.666	p.A222	0.001	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	SYDE2	HGNC	ENSG00000097096				136	0	0	107	10	8.54701
CLCA2	0	genome.wustl.edu	37	1	86900375	86900375	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	86900375	86900375	G	T	SNP	CLCA2	ENST00000370565	human	ensembl	74_37	+1	known	missense	c.919	p.A307S	0.931	tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA2	HGNC	ENSG00000137975				126	0	0	86	5	5.49451
CLCA4	0	genome.wustl.edu	37	1	87012848	87012848	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	87012848	87012848	C	T	SNP	CLCA4	ENST00000370563	human	ensembl	74_37	+1	known	silent	c.46	p.L16	0.922	pfam_Cl_channel_Ca,tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,superfamily_Fibronectin_type3,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA4	HGNC	ENSG00000016602				125	0	0	55	17	23.6111
GTF2B	0	genome.wustl.edu	37	1	89325936	89325936	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	89325936	89325936	T	C	SNP	GTF2B	ENST00000370500	human	ensembl	74_37	-1	known	missense	c.292	p.N98D	1.000	pfam_Cyclin_N	pfam_TFIIB_cyclin,pfam_Znf_TFIIB,pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pfscan_Znf_TFIIB,prints_TFIIB	-	no_errors	GTF2B	HGNC	ENSG00000137947				104	0	0	54	15	21.7391
GBP4	0	genome.wustl.edu	37	1	89656966	89656966	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	89656966	89656966	C	A	SNP	GBP4	ENST00000355754	human	ensembl	74_37	-1	known	missense	c.894	p.E298D	0.001	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP4	HGNC	ENSG00000162654				126	0	0	74	6	7.5
LRRC8B	0	genome.wustl.edu	37	1	90049465	90049465	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	90049465	90049465	A	G	SNP	LRRC8B	ENST00000330947	human	ensembl	74_37	+1	known	missense	c.1256	p.Q419R	1.000	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8B	HGNC	ENSG00000197147				104	0	0	63	6	8.69565
SLC2A7	0	genome.wustl.edu	37	1	9073610	9073610	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	9073610	9073610	C	T	SNP	SLC2A7	ENST00000400906	human	ensembl	74_37	-1	known	missense	c.988	p.V330I	0.821	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A7	HGNC	ENSG00000197241				70	0	0	30	17	36.1702
SLC2A7	0	genome.wustl.edu	37	1	9073627	9073627	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	9073627	9073627	G	A	SNP	SLC2A7	ENST00000400906	human	ensembl	74_37	-1	known	missense	c.971	p.T324M	0.870	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A7	HGNC	ENSG00000197241				76	0	0	34	17	33.3333
HFM1	0	genome.wustl.edu	37	1	91788662	91788662	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	91788662	91788662	C	T	SNP	HFM1	ENST00000370425	human	ensembl	74_37	-1	known	missense	c.2522	p.R841Q	0.992	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HFM1	HGNC	ENSG00000162669				60	0	0	27	18	40
CNN3	0	genome.wustl.edu	37	1	95363495	95363495	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	95363495	95363495	G	A	SNP	CNN3	ENST00000370206	human	ensembl	74_37	-1	known	missense	c.793	p.R265W	1.000	pfam_Calponin_repeat,pfscan_Calponin_repeat,prints_Calponin	pfam_Calponin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,pfscan_Calponin_repeat,prints_SM22_calponin,prints_Calponin	-	no_errors	CNN3	HGNC	ENSG00000117519				186	0	0	102	15	12.8205
TMEM201	0	genome.wustl.edu	37	1	9661455	9661455	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	9661455	9661455	T	C	SNP	TMEM201	ENST00000340381	human	ensembl	74_37	+1	known	missense	c.899	p.V300A	0.254	pfam_DUF2448	pfam_DUF2448,pfam_Ima1_N	-	no_errors	TMEM201	HGNC	ENSG00000188807				101	0	0	95	5	5
NKX2-3	0	genome.wustl.edu	37	10	101294988	101294988	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	101294988	101294988	A	G	SNP	NKX2-3	ENST00000344586	human	ensembl	74_37	+1	known	missense	c.605	p.K202R	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-3	HGNC	ENSG00000119919				28	0	0	43	4	8.51064
TLX1	0	genome.wustl.edu	37	10	102891414	102891414	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	102891414	102891414	G	A	SNP	TLX1	ENST00000370196	human	ensembl	74_37	+1	known	missense	c.116	p.R39H	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	TLX1	HGNC	ENSG00000107807				26	0	0	13	9	40.9091
TMEM180	0	genome.wustl.edu	37	10	104230502	104230502	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	104230502	104230502	T	C	SNP	TMEM180	ENST00000238936	human	ensembl	74_37	+1	known	missense	c.332	p.L111P	1.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	TMEM180	HGNC	ENSG00000138111				196	0	0	100	84	45.6522
CYP17A1	0	genome.wustl.edu	37	10	104595067	104595067	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	104595067	104595067	A	G	SNP	CYP17A1	ENST00000369887	human	ensembl	74_37	-1	known	missense	c.380	p.L127P	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP17A1	HGNC	ENSG00000148795				121	0	0	98	8	7.54717
ADD3	0	genome.wustl.edu	37	10	111877150	111877150	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	111877150	111877150	A	G	SNP	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	silent	c.537	p.L179	0.973	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700				48	0	0	30	7	18.9189
CELF2	0	genome.wustl.edu	37	10	11363338	11363338	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	11363338	11363338	G	T	SNP	CELF2	ENST00000450189	human	ensembl	74_37	+1	known	missense	c.1283	p.S428I	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA	-	no_errors	CELF2	HGNC	ENSG00000048740				47	0	0	37	8	17.7778
TCF7L2	0	genome.wustl.edu	37	10	114724358	114724358	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	114724358	114724358	C	T	SNP	TCF7L2	ENST00000355995	human	ensembl	74_37	+1	known	missense	c.425	p.T142M	1.000	pfam_CTNNB1-bd_N	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7L2	HGNC	ENSG00000148737				77	0	0	30	19	38.7755
TCF7L2	0	genome.wustl.edu	37	10	114900993	114900993	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	114900993	114900993	G	A	SNP	TCF7L2	ENST00000355995	human	ensembl	74_37	+1	known	silent	c.603	p.T201	1.000	pfam_CTNNB1-bd_N	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7L2	HGNC	ENSG00000148737				135	0	0	108	20	15.625
NRAP	0	genome.wustl.edu	37	10	115411638	115411638	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	115411638	115411638	C	T	SNP	NRAP	ENST00000369358	human	ensembl	74_37	-1	known	missense	c.599	p.R200H	0.968	NULL	pfam_Nebulin_35r-motif,pfam_Znf_LIM,smart_Znf_LIM,smart_Nebulin_35r-motif,pfscan_Znf_LIM,pfscan_Nebulin_35r-motif,prints_Nebulin	-	no_errors	NRAP	HGNC	ENSG00000197893				76	0	0	53	8	13.1148
NRAP	0	genome.wustl.edu	37	10	115413830	115413830	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	115413830	115413830	G	A	SNP	NRAP	ENST00000369358	human	ensembl	74_37	-1	known	missense	c.415	p.P139S	0.992	NULL	pfam_Nebulin_35r-motif,pfam_Znf_LIM,smart_Znf_LIM,smart_Nebulin_35r-motif,pfscan_Znf_LIM,pfscan_Nebulin_35r-motif,prints_Nebulin	-	no_errors	NRAP	HGNC	ENSG00000197893				325	0	0	201	11	5.18868
VWA2	0	genome.wustl.edu	37	10	116049203	116049203	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	116049203	116049203	G	A	SNP	VWA2	ENST00000392982	human	ensembl	74_37	+1	known	missense	c.2077	p.D693N	0.975	smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_EG-like_dom,pfam_EGF_extracell,smart_VWF_A,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_VWF_A	-	no_errors	VWA2	HGNC	ENSG00000165816				88	0	0	42	27	39.1304
WDR37	0	genome.wustl.edu	37	10	1170951	1170951	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	1170951	1170951	G	A	SNP	WDR37	ENST00000263150	human	ensembl	74_37	+1	known	missense	c.1340	p.R447Q	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR37	HGNC	ENSG00000047056				45	0	0	22	20	47.619
UPF2	0	genome.wustl.edu	37	10	12071235	12071235	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	12071235	12071235	A	G	SNP	UPF2	ENST00000356352	human	ensembl	74_37	-1	known	silent	c.654	p.D218	1.000	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	pfam_MIF4G-like_typ-3,pfam_Up-fram_suppressor-2,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	UPF2	HGNC	ENSG00000151461				38	0	0	18	16	47.0588
FAM45A	0	genome.wustl.edu	37	10	120883018	120883018	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	120883018	120883018	A	G	SNP	FAM45A	ENST00000361432	human	ensembl	74_37	+1	known	missense	c.631	p.T211A	1.000	NULL	pfam_ABL9/DENND6_dom	-	no_errors	FAM45A	HGNC	ENSG00000119979				52	0	0	36	8	18.1818
DHTKD1	0	genome.wustl.edu	37	10	12136269	12136269	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	12136269	12136269	A	G	SNP	DHTKD1	ENST00000263035	human	ensembl	74_37	+1	known	missense	c.1357	p.R453G	1.000	pfam_DH_E1,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_Transketolase-like_Pyr-bd,pfam_DH_E1,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	DHTKD1	HGNC	ENSG00000181192				53	0	0	36	3	7.69231
FGFR2	0	genome.wustl.edu	37	10	123279676	123279676	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	123279676	123279676	C	T	SNP	FGFR2	ENST00000457416	human	ensembl	74_37	-1	known	silent	c.756	p.S252	0.000	pirsf_FGF_rcpt_fam	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468				35	0	0	16	17	51.5152
PLEKHA1	0	genome.wustl.edu	37	10	124189200	124189200	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	124189200	124189200	G	A	SNP	PLEKHA1	ENST00000368990	human	ensembl	74_37	+1	known	missense	c.961	p.A321T	0.996	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA1	HGNC	ENSG00000107679				74	0	0	33	24	42.1053
HTRA1	0	genome.wustl.edu	37	10	124273782	124273782	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	124273782	124273782	C	T	SNP	HTRA1	ENST00000368984	human	ensembl	74_37	+1	known	silent	c.1350	p.D450	0.977	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_Peptidase_S1,pfam_PDZ,pfam_Kazal_dom,pfam_IGFBP-like,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_IGFBP-like,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA1	HGNC	ENSG00000166033				202	0	0	143	45	23.9362
DMBT1	0	genome.wustl.edu	37	10	124345642	124345642	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	124345642	124345642	T	C	SNP	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	missense	c.1526	p.V509A	0.980	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908				817	0	0	530	177	25.0354
ZRANB1	0	genome.wustl.edu	37	10	126673497	126673497	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	126673497	126673497	G	A	SNP	ZRANB1	ENST00000359653	human	ensembl	74_37	+1	known	missense	c.2063	p.R688Q	1.000	NULL	pfam_OTU,pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_OTU,pfscan_Znf_RanBP2	-	no_errors	ZRANB1	HGNC	ENSG00000019995				38	0	0	20	16	44.4444
CAMK1D	0	genome.wustl.edu	37	10	12870783	12870783	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	12870783	12870783	C	T	SNP	CAMK1D	ENST00000378847	human	ensembl	74_37	+1	known	missense	c.1055	p.T352M	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK1D	HGNC	ENSG00000183049				89	0	0	31	16	34.0426
CLRN3	0	genome.wustl.edu	37	10	129682059	129682059	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	129682059	129682059	A	G	SNP	CLRN3	ENST00000368671	human	ensembl	74_37	-1	known	missense	c.310	p.S104P	0.107	NULL	NULL	-	no_errors	CLRN3	HGNC	ENSG00000180745				127	1	0.78125	104	8	7.14286
GPR123	0	genome.wustl.edu	37	10	134942526	134942526	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	134942526	134942526	C	T	SNP	GPR123	ENST00000607359	human	ensembl	74_37	+1	putative	silent	c.3351	p.H1117	0.026	NULL	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	-	no_errors	GPR123	HGNC	ENSG00000197177				10	0	0	8	4	33.3333
TUBGCP2	0	genome.wustl.edu	37	10	135096605	135096605	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	135096605	135096605	C	T	SNP	TUBGCP2	ENST00000543663	human	ensembl	74_37	-1	known	missense	c.2350	p.V784I	1.000	NULL	pfam_TUBGCP,superfamily_Ocr	-	no_errors	TUBGCP2	HGNC	ENSG00000130640				58	0	0	28	31	52.5424
SLC39A12	0	genome.wustl.edu	37	10	18242334	18242334	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	18242334	18242334	G	A	SNP	SLC39A12	ENST00000377369	human	ensembl	74_37	+1	known	silent	c.129	p.P43	0.005	NULL	pfam_ZIP	-	no_errors	SLC39A12	HGNC	ENSG00000148482				87	0	0	66	20	23.2558
SLC39A12	0	genome.wustl.edu	37	10	18254596	18254596	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	18254596	18254596	G	A	SNP	SLC39A12	ENST00000377369	human	ensembl	74_37	+1	known	missense	c.728	p.R243H	0.943	NULL	pfam_ZIP	-	no_errors	SLC39A12	HGNC	ENSG00000148482				36	0	0	24	11	31.4286
KIAA1217	0	genome.wustl.edu	37	10	24813286	24813286	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	24813286	24813286	G	A	SNP	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	missense	c.2491	p.A831T	0.102	NULL	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549				110	0	0	85	10	10.5263
GAD2	0	genome.wustl.edu	37	10	26506865	26506865	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	26506865	26506865	G	A	SNP	GAD2	ENST00000259271	human	ensembl	74_37	+1	known	silent	c.231	p.Q77	1.000	NULL	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	GAD2	HGNC	ENSG00000136750				75	0	0	60	5	7.69231
YME1L1	0	genome.wustl.edu	37	10	27408258	27408258	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	27408258	27408258	T	C	SNP	YME1L1	ENST00000326799	human	ensembl	74_37	-1	known	missense	c.1703	p.K568R	1.000	pfam_Peptidase_M41,superfamily_P-loop_NTPase,tigrfam_FtsH	pfam_Peptidase_M41,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	-	no_errors	YME1L1	HGNC	ENSG00000136758				139	0	0	60	31	34.0659
LYZL2	0	genome.wustl.edu	37	10	30918549	30918549	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	30918549	30918549	G	C	SNP	LYZL2	ENST00000375318	human	ensembl	74_37	-1	known	missense	c.86	p.A29G	0.000	NULL	pfam_Glyco_hydro_22,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22,prints_Glyco_hydro_22_lys	-	no_errors	LYZL2	HGNC	ENSG00000151033				51	0	0	38	5	11.6279
PITRM1	0	genome.wustl.edu	37	10	3182941	3182941	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	3182941	3182941	G	A	SNP	PITRM1	ENST00000380989	human	ensembl	74_37	-1	known	silent	c.2712	p.G904	0.050	pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	pfam_Peptidase_M16C_assoc,pfam_Peptidase_M16_C,pfam_Pept_M16_N,superfamily_Metalloenz_LuxS/M16	-	no_errors	PITRM1	HGNC	ENSG00000107959				9	0	0	2	2	50
KIF5B	0	genome.wustl.edu	37	10	32327717	32327717	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	32327717	32327717	T	C	SNP	KIF5B	ENST00000302418	human	ensembl	74_37	-1	known	missense	c.431	p.D144G	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5B	HGNC	ENSG00000170759				31	0	0	14	4	22.2222
NRP1	0	genome.wustl.edu	37	10	33495183	33495183	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	33495183	33495183	C	T	SNP	NRP1	ENST00000374816	human	ensembl	74_37	-1	known	missense	c.1858	p.V620I	0.000	pirsf_Neuropilin	pfam_CUB_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CUB_dom,smart_CUB_dom,smart_Coagulation_fac_5/8-C_type_dom,pirsf_Neuropilin,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	NRP1	HGNC	ENSG00000099250				52	0	0	32	5	13.5135
HSD17B7P2	0	genome.wustl.edu	37	10	38654370	38654370	+	RNA	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	38654370	38654370	A	G	SNP	HSD17B7P2	ENST00000494540	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSD17B7P2	HGNC	ENSG00000099251				60	0	0	39	5	11.3636
HSD17B7P2	0	genome.wustl.edu	37	10	38654495	38654495	+	RNA	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	38654495	38654495	G	T	SNP	HSD17B7P2	ENST00000494540	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSD17B7P2	HGNC	ENSG00000099251				32	0	0	26	15	36.5854
LOC441666	0	genome.wustl.edu	37	10	42832147	42832147	+	RNA	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	42832147	42832147	G	T	SNP	LOC441666	ENST00000609841	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.972	-	-	-	no_errors	RP11-313J2.1	Clone_based_vega_gene	ENSG00000215146				14	0	0	14	4	22.2222
RET	0	genome.wustl.edu	37	10	43606912	43606912	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	43606912	43606912	A	G	SNP	RET	ENST00000355710	human	ensembl	74_37	+1	known	silent	c.1521	p.S507	0.000	pirsf_Tyr_kinase_Ret_rcpt	pirsf_Tyr_kinase_Ret_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cadherin,superfamily_Kinase-like_dom,superfamily_Cadherin-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Cadherin	-	no_errors	RET	HGNC	ENSG00000165731				30	0	0	24	3	11.1111
C10orf10	0	genome.wustl.edu	37	10	45473190	45473190	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	45473190	45473190	G	A	SNP	C10orf10	ENST00000298295	human	ensembl	74_37	-1	known	missense	c.289	p.P97S	0.003	NULL	NULL	-	no_errors	C10orf10	HGNC	ENSG00000165507				90	0	0	58	28	32.5581
ANXA8L2	0	genome.wustl.edu	37	10	47756075	47756075	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	47756075	47756075	G	A	SNP	ANXA8L2	ENST00000374277	human	ensembl	74_37	+1	known	missense	c.535	p.A179T	0.992	prints_AnnexinVIII	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinVIII,prints_AnnexinIII	-	no_errors	ANXA8L2	HGNC	ENSG00000186807				290	0	0	174	63	26.5823
OGDHL	0	genome.wustl.edu	37	10	50945991	50945991	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	50945991	50945991	A	G	SNP	OGDHL	ENST00000374103	human	ensembl	74_37	-1	known	splice_site	c.2517+2	e18+2	1.000	-	-	-	no_errors	OGDHL	HGNC	ENSG00000197444				252	0	0	199	13	6.13208
PCDH15	0	genome.wustl.edu	37	10	55616946	55616946	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	55616946	55616946	T	C	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	silent	c.3795	p.E1265	1.000	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				64	0	0	38	4	9.52381
PCDH15	0	genome.wustl.edu	37	10	55943276	55943276	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	55943276	55943276	C	T	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	silent	c.1518	p.T506	0.001	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				124	1	0.8	64	28	30.4348
FBXO18	0	genome.wustl.edu	37	10	5955763	5955763	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	5955763	5955763	A	G	SNP	FBXO18	ENST00000379999	human	ensembl	74_37	+1	known	missense	c.1418	p.Q473R	0.086	NULL	pfam_UvrD-like_ATP-bd,pfam_F-box_dom,superfamily_P-loop_NTPase,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO18	HGNC	ENSG00000134452				56	0	0	42	4	8.69565
BICC1	0	genome.wustl.edu	37	10	60573627	60573627	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	60573627	60573627	A	T	SNP	BICC1	ENST00000373886	human	ensembl	74_37	+1	known	missense	c.2414	p.E805V	1.000	NULL	pfam_KH_dom_type_1,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_KH_dom,smart_SAM,pfscan_SAM,pfscan_KH_dom_type_1	-	no_errors	BICC1	HGNC	ENSG00000122870				136	0	0	66	37	35.9223
JMJD1C	0	genome.wustl.edu	37	10	64975328	64975328	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	64975328	64975328	G	A	SNP	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	silent	c.807	p.N269	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988				84	0	0	49	4	7.54717
SIRT1	0	genome.wustl.edu	37	10	69669181	69669181	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	69669181	69669181	C	T	SNP	SIRT1	ENST00000212015	human	ensembl	74_37	+1	known	missense	c.1339	p.P447S	1.000	pfam_Sirtuin,pfscan_Ssirtuin_cat_dom	pfam_Sirtuin,pfscan_Ssirtuin_cat_dom	-	no_errors	SIRT1	HGNC	ENSG00000096717				66	0	0	33	11	25
CCAR1	0	genome.wustl.edu	37	10	70513638	70513638	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	70513638	70513638	G	A	SNP	CCAR1	ENST00000265872	human	ensembl	74_37	+1	known	missense	c.1148	p.R383H	1.000	NULL	pfam_SAP_dom,superfamily_NA-bd_OB-fold,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	CCAR1	HGNC	ENSG00000060339				152	0	0	101	8	7.33945
SUPV3L1	0	genome.wustl.edu	37	10	70955048	70955048	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	70955048	70955048	C	T	SNP	SUPV3L1	ENST00000486661	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SUPV3L1	HGNC	ENSG00000156502				52	0	0	14	12	46.1538
NPFFR1	0	genome.wustl.edu	37	10	72025953	72025953	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	72025953	72025953	C	T	SNP	NPFFR1	ENST00000277942	human	ensembl	74_37	-1	novel	missense	c.202	p.V68M	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPFF_rcpt_1,prints_NPFF_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPFFR1	HGNC	ENSG00000148734				58	0	0	58	4	6.45161
PALD1	0	genome.wustl.edu	37	10	72298851	72298851	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	72298851	72298851	C	A	SNP	PALD1	ENST00000263563	human	ensembl	74_37	+1	known	missense	c.1573	p.L525M	0.995	NULL	smart_Tyr_Pase_cat	-	no_errors	PALD1	HGNC	ENSG00000107719				43	0	0	25	10	28.5714
ADAMTS14	0	genome.wustl.edu	37	10	72468418	72468418	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	72468418	72468418	C	T	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	missense	c.754	p.R252W	1.000	NULL	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316				123	0	0	39	20	33.8983
LOC101929145	0	genome.wustl.edu	37	10	75255537	75255537	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	75255537	75255537	C	T	SNP	LOC101929145	ENST00000422977	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-137L10.6	Clone_based_vega_gene	ENSG00000221817				36	0	0	29	7	19.4444
USP54	0	genome.wustl.edu	37	10	75289520	75289520	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	75289520	75289520	A	G	SNP	USP54	ENST00000339859	human	ensembl	74_37	-1	known	missense	c.1978	p.S660P	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348				250	0	0	190	14	6.86275
MYOZ1	0	genome.wustl.edu	37	10	75391878	75391878	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	75391878	75391878	C	T	SNP	MYOZ1	ENST00000359322	human	ensembl	74_37	-1	known	missense	c.710	p.R237H	1.000	pfam_Calsarcin-bd	pfam_Calsarcin-bd	-	no_errors	MYOZ1	HGNC	ENSG00000177791				90	0	0	39	17	30.3571
SYNPO2L	0	genome.wustl.edu	37	10	75407182	75407182	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	75407182	75407182	G	A	SNP	SYNPO2L	ENST00000394810	human	ensembl	74_37	-1	known	missense	c.2228	p.A743V	0.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2L	HGNC	ENSG00000166317				123	0	0	85	29	25.4386
CAMK2G	0	genome.wustl.edu	37	10	75585057	75585057	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	75585057	75585057	C	T	SNP	CAMK2G	ENST00000423381	human	ensembl	74_37	-1	known	missense	c.1135	p.A379T	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2G	HGNC	ENSG00000148660				123	0	0	86	11	11.3402
KAT6B	0	genome.wustl.edu	37	10	76790792	76790792	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	76790792	76790792	C	T	SNP	KAT6B	ENST00000287239	human	ensembl	74_37	+1	known	silent	c.6210	p.Y2070	1.000	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,pfam_Histone_H1/H5_H15,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6B	HGNC	ENSG00000156650				44	0	0	46	7	13.2075
DUSP13	0	genome.wustl.edu	37	10	76854517	76854517	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	76854517	76854517	G	T	SNP	DUSP13	ENST00000491677	human	ensembl	74_37	-1	known	missense	c.901	p.R301S	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP13	HGNC	ENSG00000079393				41	0	0	31	10	24.3902
DLG5	0	genome.wustl.edu	37	10	79601943	79601943	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	79601943	79601943	G	A	SNP	DLG5	ENST00000372391	human	ensembl	74_37	-1	known	missense	c.1133	p.A378V	1.000	NULL	pfam_PDZ,pfam_DUF622,pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_SH3_domain,superfamily_DEATH-like_dom,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_CARD,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG5	HGNC	ENSG00000151208				108	0	0	63	41	39.4231
CDHR1	0	genome.wustl.edu	37	10	85973973	85973973	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	85973973	85973973	C	T	SNP	CDHR1	ENST00000372117	human	ensembl	74_37	+1	known	missense	c.2176	p.R726C	1.000	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR1	HGNC	ENSG00000148600				123	0	0	82	44	34.9206
IFIT5	0	genome.wustl.edu	37	10	91178053	91178053	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	91178053	91178053	G	A	SNP	IFIT5	ENST00000371795	human	ensembl	74_37	+1	known	missense	c.1097	p.R366H	0.000	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFIT5	HGNC	ENSG00000152778				62	0	0	18	10	35.7143
AMPD3	0	genome.wustl.edu	37	11	10524275	10524275	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	10524275	10524275	T	C	SNP	AMPD3	ENST00000396553	human	ensembl	74_37	+1	known	missense	c.1850	p.V617A	0.998	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD3	HGNC	ENSG00000133805				244	0	0	137	9	6.16438
RNF141	0	genome.wustl.edu	37	11	10536575	10536575	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	10536575	10536575	T	C	SNP	RNF141	ENST00000265981	human	ensembl	74_37	-1	known	missense	c.581	p.Q194R	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF141	HGNC	ENSG00000110315				127	0	0	48	19	28.3582
MUC2	0	genome.wustl.edu	37	11	1098735	1098735	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	1098735	1098735	T	C	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.7105	p.C2369R	1.000	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				18	0	0	15	2	11.7647
PPP2R1B	0	genome.wustl.edu	37	11	111631733	111631733	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	111631733	111631733	G	A	SNP	PPP2R1B	ENST00000311129	human	ensembl	74_37	-1	known	missense	c.349	p.R117C	1.000	superfamily_ARM-type_fold,pfscan_HEAT_type_2	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1B	HGNC	ENSG00000137713				71	0	0	37	13	26
HTR3A	0	genome.wustl.edu	37	11	113853935	113853935	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	113853935	113853935	C	A	SNP	HTR3A	ENST00000355556	human	ensembl	74_37	+1	known	silent	c.486	p.A162	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_5HT3_rcpt_A,prints_5HT3_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	HTR3A	HGNC	ENSG00000166736				224	0	0	143	44	23.5294
NXPE4	0	genome.wustl.edu	37	11	114453198	114453198	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	114453198	114453198	T	C	SNP	NXPE4	ENST00000375478	human	ensembl	74_37	-1	known	silent	c.642	p.Q214	0.000	pfam_NXPH/NXPE	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE4	HGNC	ENSG00000137634				83	0	0	49	34	40.9639
APOA1	0	genome.wustl.edu	37	11	116706800	116706800	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	116706800	116706800	C	T	SNP	APOA1	ENST00000236850	human	ensembl	74_37	-1	known	silent	c.528	p.A176	0.011	pfam_ApoA1_A4_E	pfam_ApoA1_A4_E	-	no_errors	APOA1	HGNC	ENSG00000118137				46	0	0	38	4	9.52381
PCSK7	0	genome.wustl.edu	37	11	117097932	117097932	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	117097932	117097932	G	A	SNP	PCSK7	ENST00000320934	human	ensembl	74_37	-1	known	missense	c.710	p.A237V	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,prints_Peptidase_S8_subtilisin-rel	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK7	HGNC	ENSG00000160613				126	0	0	58	39	40.2062
CEP164	0	genome.wustl.edu	37	11	117253535	117253535	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	117253535	117253535	C	T	SNP	CEP164	ENST00000278935	human	ensembl	74_37	+1	known	missense	c.1601	p.A534V	0.008	NULL	superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	CEP164	HGNC	ENSG00000110274				114	0	0	63	4	5.97015
DSCAML1	0	genome.wustl.edu	37	11	117307927	117307927	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	117307927	117307927	G	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.4811	p.A1604V	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				148	0	0	95	33	25.7812
ARCN1	0	genome.wustl.edu	37	11	118452034	118452034	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	118452034	118452034	G	A	SNP	ARCN1	ENST00000264028	human	ensembl	74_37	+1	known	missense	c.77	p.R26Q	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pfscan_Clathrin_mu_C	-	no_errors	ARCN1	HGNC	ENSG00000095139				143	0	0	103	7	6.36364
ARCN1	0	genome.wustl.edu	37	11	118454013	118454013	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	118454013	118454013	G	A	SNP	ARCN1	ENST00000264028	human	ensembl	74_37	+1	known	silent	c.387	p.Q129	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pfscan_Clathrin_mu_C	-	no_errors	ARCN1	HGNC	ENSG00000095139				47	0	0	30	5	14.2857
BCL9L	0	genome.wustl.edu	37	11	118769978	118769978	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	118769978	118769978	A	G	SNP	BCL9L	ENST00000334801	human	ensembl	74_37	-1	known	missense	c.3646	p.C1216R	0.992	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174				16	0	0	11	5	31.25
C1QTNF5	0	genome.wustl.edu	37	11	119210189	119210189	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	119210189	119210189	G	C	SNP	C1QTNF5	ENST00000445041	human	ensembl	74_37	-1	known	missense	c.584	p.A195G	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF5	HGNC	ENSG00000223953				89	0	0	48	25	34.2466
ARHGEF12	0	genome.wustl.edu	37	11	120337927	120337927	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	120337927	120337927	C	A	SNP	ARHGEF12	ENST00000356641	human	ensembl	74_37	+1	known	missense	c.2707	p.R903S	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_RGS-like_dom,pfam_DH-domain,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_DH-domain,superfamily_PDZ,smart_PDZ,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF12	HGNC	ENSG00000196914				96	0	0	37	20	35.0877
MICAL2	0	genome.wustl.edu	37	11	12281474	12281474	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	12281474	12281474	C	A	SNP	MICAL2	ENST00000379612	human	ensembl	74_37	+1	known	missense	c.2686	p.L896M	0.999	NULL	pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,pfam_FAD_bind_dom,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,prints_Rng_hydrolase-like,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICAL2	HGNC	ENSG00000133816				12	0	0	10	9	47.3684
SNORD14C	0	genome.wustl.edu	37	11	122930046	122930046	+	RNA	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	122930046	122930046	C	A	SNP	SNORD14C	ENST00000365382	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORD14C	HGNC	ENSG00000202252				21	0	0	11	9	45
OR6T1	0	genome.wustl.edu	37	11	123814132	123814132	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	123814132	123814132	G	A	SNP	OR6T1	ENST00000321252	human	ensembl	74_37	-1	known	silent	c.414	p.G138	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6T1	HGNC	ENSG00000181499				48	0	0	35	20	36.3636
MUC5B	0	genome.wustl.edu	37	11	1250965	1250965	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	1250965	1250965	G	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.1157	p.G386V	0.000	pfam_TIL_dom,superfamily_TIL_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				8	0	0	11	5	31.25
STT3A	0	genome.wustl.edu	37	11	125475553	125475553	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	125475553	125475553	T	C	SNP	STT3A	ENST00000392708	human	ensembl	74_37	+1	known	missense	c.538	p.Y180H	1.000	pfam_Oligo_trans_STT3	pfam_Oligo_trans_STT3	-	no_errors	STT3A	HGNC	ENSG00000134910				162	0	0	73	22	23.1579
C11orf45	0	genome.wustl.edu	37	11	128774403	128774403	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	128774403	128774403	G	A	SNP	C11orf45	ENST00000310799	human	ensembl	74_37	-1	known	missense	c.59	p.T20M	0.000	NULL	NULL	-	no_errors	C11orf45	HGNC	ENSG00000174370				119	0	0	71	31	30.3922
KCNJ5	0	genome.wustl.edu	37	11	128781633	128781633	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	128781633	128781633	A	G	SNP	KCNJ5	ENST00000529694	human	ensembl	74_37	+1	known	silent	c.465	p.R155	0.672	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.4	-	no_errors	KCNJ5	HGNC	ENSG00000120457				207	0	0	100	38	27.5362
ADAMTS15	0	genome.wustl.edu	37	11	130341187	130341187	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	130341187	130341187	C	T	SNP	ADAMTS15	ENST00000299164	human	ensembl	74_37	+1	known	silent	c.1987	p.L663	1.000	prints_Peptidase_M12B_ADAM-TS	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS,prints_Pept_M12B_ADAM-TS8	-	no_errors	ADAMTS15	HGNC	ENSG00000166106				72	0	0	51	14	21.5385
COPB1	0	genome.wustl.edu	37	11	14496077	14496077	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	14496077	14496077	G	A	SNP	COPB1	ENST00000249923	human	ensembl	74_37	-1	known	silent	c.1701	p.R567	1.000	superfamily_ARM-type_fold,pirsf_COPB1	pfam_Coatomer_bsu_C,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	-	no_errors	COPB1	HGNC	ENSG00000129083				134	0	0	129	42	24.5614
BRSK2	0	genome.wustl.edu	37	11	1471011	1471011	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	1471011	1471011	G	A	SNP	BRSK2	ENST00000382179	human	ensembl	74_37	+1	known	missense	c.1370	p.R457Q	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BRSK2	HGNC	ENSG00000174672				124	0	0	63	54	46.1538
KRTAP5-5	0	genome.wustl.edu	37	11	1651222	1651222	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	1651222	1651222	G	A	SNP	KRTAP5-5	ENST00000399676	human	ensembl	74_37	+1	known	missense	c.152	p.G51D	1.000	NULL	NULL	-	no_errors	KRTAP5-5	HGNC	ENSG00000185940				91	0	0	91	75	45.1807
ABCC8	0	genome.wustl.edu	37	11	17464410	17464410	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	17464410	17464410	A	G	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.1487	p.L496P	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071				116	0	0	67	31	31.6327
KCNC1	0	genome.wustl.edu	37	11	17793944	17793944	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	17793944	17793944	A	G	SNP	KCNC1	ENST00000265969	human	ensembl	74_37	+1	known	missense	c.1303	p.I435V	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC1	HGNC	ENSG00000129159				127	0	0	64	49	43.3628
NAV2	0	genome.wustl.edu	37	11	20066984	20066984	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	20066984	20066984	G	T	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	missense	c.3739	p.G1247C	0.998	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833				46	0	0	37	16	30.1887
NAV2	0	genome.wustl.edu	37	11	20113820	20113820	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	20113820	20113820	C	T	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	silent	c.5898	p.S1966	1.000	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833				160	1	0.621118	125	26	17.2185
KIAA1549L	0	genome.wustl.edu	37	11	33565884	33565884	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	33565884	33565884	T	C	SNP	KIAA1549L	ENST00000321505	human	ensembl	74_37	+1	known	splice_site	c.1882+2	e1+2	1.000	-	-	-	no_errors	KIAA1549L	HGNC	ENSG00000110427				127	0	0	62	35	36.0825
ACCS	0	genome.wustl.edu	37	11	44102617	44102617	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	44102617	44102617	T	C	SNP	ACCS	ENST00000263776	human	ensembl	74_37	+1	known	splice_site	c.969+2	e10+2	1.000	-	-	-	no_errors	ACCS	HGNC	ENSG00000110455				71	0	0	67	4	5.6338
DGKZ	0	genome.wustl.edu	37	11	46388002	46388002	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	46388002	46388002	A	G	SNP	DGKZ	ENST00000454345	human	ensembl	74_37	+1	known	missense	c.196	p.R66G	0.038	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKZ	HGNC	ENSG00000149091				8	0	0	4	3	42.8571
F2	0	genome.wustl.edu	37	11	46747567	46747567	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	46747567	46747567	G	T	SNP	F2	ENST00000311907	human	ensembl	74_37	+1	known	missense	c.718	p.A240S	0.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pirsf_Prothrombin/thrombin,pfscan_Kringle	pfam_Peptidase_S1,pfam_Kringle,pfam_Thrombin_light_chain,pfam_GLA_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,superfamily_GLA_domain,smart_GLA_domain,smart_Kringle,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_GLA_domain,pfscan_Kringle,pfscan_Peptidase_S1,prints_Prothrombin/thrombin,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F2	HGNC	ENSG00000180210				101	0	0	71	16	18.3908
NR1H3	0	genome.wustl.edu	37	11	47282096	47282096	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	47282096	47282096	C	T	SNP	NR1H3	ENST00000441012	human	ensembl	74_37	+1	known	silent	c.369	p.R123	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Liver_X_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt,prints_Ecdystd_rcpt	-	no_errors	NR1H3	HGNC	ENSG00000025434				61	0	0	59	4	6.34921
C1QTNF4	0	genome.wustl.edu	37	11	47612277	47612277	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	47612277	47612277	C	T	SNP	C1QTNF4	ENST00000302514	human	ensembl	74_37	-1	known	missense	c.86	p.R29H	1.000	superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,prints_C1q,pfscan_C1q	-	no_errors	C1QTNF4	HGNC	ENSG00000172247				19	0	0	22	5	18.5185
PTDSS2	0	genome.wustl.edu	37	11	486958	486958	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	486958	486958	A	C	SNP	PTDSS2	ENST00000308020	human	ensembl	74_37	+1	known	missense	c.455	p.Q152P	1.000	pfam_PSS	pfam_PSS	-	no_errors	PTDSS2	HGNC	ENSG00000174915				111	0	0	81	27	25
RNH1	0	genome.wustl.edu	37	11	494780	494780	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	494780	494780	T	C	SNP	RNH1	ENST00000354420	human	ensembl	74_37	-1	known	splice_site	c.1299-2	e9-2	0.990	-	-	-	no_errors	RNH1	HGNC	ENSG00000023191				76	0	0	63	5	7.35294
OR5L1	0	genome.wustl.edu	37	11	55579770	55579770	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	55579770	55579770	G	T	SNP	OR5L1	ENST00000333973	human	ensembl	74_37	+1	known	silent	c.828	p.V276	0.697	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5L1	HGNC	ENSG00000186117				72	0	0	58	31	34.8315
OR5I1	0	genome.wustl.edu	37	11	55703317	55703317	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	55703317	55703317	A	G	SNP	OR5I1	ENST00000301532	human	ensembl	74_37	-1	known	missense	c.560	p.L187P	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5I1	HGNC	ENSG00000167825				44	0	0	27	23	46
RASSF7	0	genome.wustl.edu	37	11	562253	562253	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	562253	562253	G	A	SNP	RASSF7	ENST00000344375	human	ensembl	74_37	+1	known	missense	c.299	p.C100Y	0.047	NULL	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	-	no_errors	RASSF7	HGNC	ENSG00000099849				79	0	0	38	22	36.6667
OR5M10	0	genome.wustl.edu	37	11	56345112	56345112	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	56345112	56345112	C	A	SNP	OR5M10	ENST00000526812	human	ensembl	74_37	-1	known	missense	c.86	p.G29V	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M10	HGNC	ENSG00000254834				106	0	0	84	7	7.69231
PRG3	0	genome.wustl.edu	37	11	57146221	57146221	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	57146221	57146221	C	T	SNP	PRG3	ENST00000287143	human	ensembl	74_37	-1	known	missense	c.440	p.R147H	0.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_Eosinophil_major_basic	-	no_errors	PRG3	HGNC	ENSG00000156575				273	0	0	171	83	32.6772
OSBP	0	genome.wustl.edu	37	11	59345799	59345799	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	59345799	59345799	G	A	SNP	OSBP	ENST00000263847	human	ensembl	74_37	-1	known	missense	c.1883	p.T628M	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBP	HGNC	ENSG00000110048				98	0	0	58	45	43.6893
PATL1	0	genome.wustl.edu	37	11	59425190	59425190	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	59425190	59425190	G	T	SNP	PATL1	ENST00000300146	human	ensembl	74_37	-1	known	missense	c.434	p.P145H	0.998	pfam_Topo_II-assoc_PAT1	pfam_Topo_II-assoc_PAT1	-	no_errors	PATL1	HGNC	ENSG00000166889				45	0	0	55	5	8.33333
OR56A1	0	genome.wustl.edu	37	11	6048455	6048455	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	6048455	6048455	C	T	SNP	OR56A1	ENST00000316650	human	ensembl	74_37	-1	known	silent	c.480	p.A160	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR56A1	HGNC	ENSG00000180934				114	0	0	70	31	30.6931
DDB1	0	genome.wustl.edu	37	11	61099040	61099040	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	61099040	61099040	G	A	SNP	DDB1	ENST00000301764	human	ensembl	74_37	-1	known	missense	c.185	p.A62V	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	DDB1	HGNC	ENSG00000167986				51	0	0	36	30	45.4545
DAGLA	0	genome.wustl.edu	37	11	61511766	61511766	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	61511766	61511766	C	A	SNP	DAGLA	ENST00000257215	human	ensembl	74_37	+1	known	silent	c.2934	p.G978	1.000	NULL	pfam_Lipase_3	-	no_errors	DAGLA	HGNC	ENSG00000134780				108	1	0.917431	68	27	28.4211
FADS2	0	genome.wustl.edu	37	11	61596030	61596030	+	Silent	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	61596030	61596030	C	G	SNP	FADS2	ENST00000278840	human	ensembl	74_37	+1	known	silent	c.168	p.G56	0.246	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Fatty_acid/sphinglp_desaturase,pfscan_Cyt_B5-like_heme/steroid-bd	pfam_Fatty_acid_desaturase-1,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Fatty_acid/sphinglp_desaturase,pfscan_Cyt_B5-like_heme/steroid-bd	-	no_errors	FADS2	HGNC	ENSG00000134824				49	0	0	38	19	33.3333
FADS3	0	genome.wustl.edu	37	11	61643464	61643464	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	61643464	61643464	G	A	SNP	FADS3	ENST00000527697	human	ensembl	74_37	-1	putative	missense	c.800	p.T267M	0.000	pfam_Fatty_acid_desaturase-1	pfam_Fatty_acid_desaturase-1	-	no_errors	FADS3	HGNC	ENSG00000221968				110	0	0	58	34	36.9565
SCGB1A1	0	genome.wustl.edu	37	11	62189743	62189743	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	62189743	62189743	A	G	SNP	SCGB1A1	ENST00000278282	human	ensembl	74_37	+1	known	missense	c.106	p.M36V	0.000	pfam_Secretoglobin,superfamily_Secretoglobin,smart_Secretoglobin,prints_Uteroglobin	pfam_Secretoglobin,superfamily_Secretoglobin,smart_Secretoglobin,prints_Uteroglobin	-	no_errors	SCGB1A1	HGNC	ENSG00000149021				111	0	0	59	18	23.3766
OR52W1	0	genome.wustl.edu	37	11	6221292	6221292	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	6221292	6221292	T	A	SNP	OR52W1	ENST00000311352	human	ensembl	74_37	+1	known	missense	c.839	p.I280N	0.987	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR52W1	HGNC	ENSG00000175485				519	0	0	385	27	6.5534
SLC22A10	0	genome.wustl.edu	37	11	63064835	63064835	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	63064835	63064835	C	T	SNP	SLC22A10	ENST00000332793	human	ensembl	74_37	+1	known	silent	c.567	p.C189	0.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A10	HGNC	ENSG00000184999				115	0	0	88	5	5.37634
RARRES3	0	genome.wustl.edu	37	11	63313655	63313655	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	63313655	63313655	C	T	SNP	RARRES3	ENST00000255688	human	ensembl	74_37	+1	known	missense	c.422	p.T141M	0.000	NULL	pfam_LRAT-like_dom	-	no_errors	RARRES3	HGNC	ENSG00000133321				318	0	0	198	104	34.4371
MAP4K2	0	genome.wustl.edu	37	11	64566945	64566945	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	64566945	64566945	T	G	SNP	MAP4K2	ENST00000294066	human	ensembl	74_37	-1	known	missense	c.1001	p.Q334P	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MAP4K2	HGNC	ENSG00000168067				85	0	0	69	16	18.8235
PPP2R5B	0	genome.wustl.edu	37	11	64695592	64695592	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	64695592	64695592	G	A	SNP	PPP2R5B	ENST00000164133	human	ensembl	74_37	+1	known	missense	c.553	p.V185M	0.999	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5B	HGNC	ENSG00000068971				137	0	0	72	37	33.945
DNHD1	0	genome.wustl.edu	37	11	6524067	6524067	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	6524067	6524067	T	C	SNP	DNHD1	ENST00000254579	human	ensembl	74_37	+1	known	silent	c.831	p.D277	0.000	NULL	pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,superfamily_P-loop_NTPase,superfamily_t-SNARE	-	no_errors	DNHD1	HGNC	ENSG00000179532				91	0	0	65	4	5.7971
MALAT1	0	genome.wustl.edu	37	11	65272357	65272357	+	RNA	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	65272357	65272357	A	G	SNP	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.195	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				40	0	0	23	9	28.125
EHBP1L1	0	genome.wustl.edu	37	11	65349561	65349561	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	65349561	65349561	A	G	SNP	EHBP1L1	ENST00000309295	human	ensembl	74_37	+1	known	missense	c.1418	p.E473G	0.139	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	EHBP1L1	HGNC	ENSG00000173442				42	0	0	34	10	22.7273
DRAP1	0	genome.wustl.edu	37	11	65687309	65687309	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	65687309	65687309	T	C	SNP	DRAP1	ENST00000312515	human	ensembl	74_37	+1	known	missense	c.101	p.V34A	1.000	pfam_CBFA_NFYB_domain,pfam_Histone_core_D,superfamily_Histone-fold	pfam_CBFA_NFYB_domain,pfam_Histone_core_D,superfamily_Histone-fold	-	no_errors	DRAP1	HGNC	ENSG00000175550				59	0	0	51	4	7.27273
CATSPER1	0	genome.wustl.edu	37	11	65784571	65784571	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	65784571	65784571	T	G	SNP	CATSPER1	ENST00000312106	human	ensembl	74_37	-1	known	missense	c.2276	p.Q759P	1.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER1	HGNC	ENSG00000175294				42	0	0	20	9	31.0345
TMEM151A	0	genome.wustl.edu	37	11	66061945	66061945	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	66061945	66061945	C	T	SNP	TMEM151A	ENST00000327259	human	ensembl	74_37	+1	known	silent	c.228	p.A76	0.006	NULL	NULL	-	no_errors	TMEM151A	HGNC	ENSG00000179292				24	0	0	25	21	45.6522
TMEM151A	0	genome.wustl.edu	37	11	66061972	66061972	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	66061972	66061972	G	A	SNP	TMEM151A	ENST00000327259	human	ensembl	74_37	+1	known	silent	c.255	p.P85	0.003	NULL	NULL	-	no_errors	TMEM151A	HGNC	ENSG00000179292				24	0	0	20	24	54.5455
ILK	0	genome.wustl.edu	37	11	6630018	6630018	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	6630018	6630018	G	A	SNP	ILK	ENST00000299421	human	ensembl	74_37	+1	known	missense	c.446	p.R149Q	1.000	superfamily_Ankyrin_rpt-contain_dom,pirsf_Integrin-linked_kinase	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ankyrin_rpt,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Integrin-linked_kinase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ILK	HGNC	ENSG00000166333				75	0	0	42	37	46.8354
PPP1CA	0	genome.wustl.edu	37	11	67166078	67166078	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	67166078	67166078	C	T	SNP	PPP1CA	ENST00000312989	human	ensembl	74_37	-1	known	silent	c.954	p.G318	1.000	NULL	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP1CA	HGNC	ENSG00000172531				60	0	0	56	5	8.19672
LRP5	0	genome.wustl.edu	37	11	68153910	68153910	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	68153910	68153910	A	G	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	missense	c.1142	p.D381G	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,smart_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337				65	0	0	71	5	6.57895
OR2D2	0	genome.wustl.edu	37	11	6913395	6913395	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	6913395	6913395	C	T	SNP	OR2D2	ENST00000299459	human	ensembl	74_37	-1	known	missense	c.337	p.A113T	0.988	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Olfact_rcpt	-	no_errors	OR2D2	HGNC	ENSG00000166368				87	0	0	88	9	9.27835
SHANK2	0	genome.wustl.edu	37	11	70332338	70332338	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	70332338	70332338	C	T	SNP	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	missense	c.4063	p.E1355K	0.941	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105				48	0	0	44	23	34.3284
DHCR7	0	genome.wustl.edu	37	11	71150032	71150032	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	71150032	71150032	G	A	SNP	DHCR7	ENST00000355527	human	ensembl	74_37	-1	known	missense	c.724	p.R242C	0.998	pfam_Ergosterol_biosynth_ERG4_ERG24	pfam_Ergosterol_biosynth_ERG4_ERG24	-	no_errors	DHCR7	HGNC	ENSG00000172893				76	0	0	33	16	32.6531
INPPL1	0	genome.wustl.edu	37	11	71948719	71948719	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	71948719	71948719	C	T	SNP	INPPL1	ENST00000298229	human	ensembl	74_37	+1	known	missense	c.3431	p.A1144V	0.002	NULL	pfam_Endo/exonuclease/phosphatase,pfam_SH2,pfam_SAM_2,pfam_SAM_type1,superfamily_Endo/exonuclease/phosphatase,superfamily_SAM/pointed,smart_SH2,smart_IPPc,smart_SAM,pfscan_SAM,pfscan_SH2,prints_SH2	-	no_errors	INPPL1	HGNC	ENSG00000165458				53	0	0	14	20	58.8235
STARD10	0	genome.wustl.edu	37	11	72466074	72466074	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	72466074	72466074	C	T	SNP	STARD10	ENST00000334805	human	ensembl	74_37	-1	known	silent	c.744	p.A248	0.769	NULL	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	STARD10	HGNC	ENSG00000214530				29	0	0	12	5	29.4118
STARD10	0	genome.wustl.edu	37	11	72469592	72469592	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	72469592	72469592	A	G	SNP	STARD10	ENST00000334805	human	ensembl	74_37	-1	known	missense	c.442	p.Y148H	1.000	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	STARD10	HGNC	ENSG00000214530				62	0	0	22	15	40.5405
GAB2	0	genome.wustl.edu	37	11	77937657	77937657	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	77937657	77937657	C	G	SNP	GAB2	ENST00000361507	human	ensembl	74_37	-1	known	missense	c.1061	p.R354P	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB2	HGNC	ENSG00000033327				102	0	0	45	21	31.8182
C11orf82	0	genome.wustl.edu	37	11	82643483	82643483	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	82643483	82643483	A	G	SNP	C11orf82	ENST00000430323	human	ensembl	74_37	+1	known	missense	c.1103	p.H368R	0.000	NULL	pfam_Rep_factor-A_C,superfamily_NA-bd_OB-fold	-	no_errors	C11orf82	HGNC	ENSG00000165490				304	1	0.327869	228	12	5
GRM5	0	genome.wustl.edu	37	11	88242557	88242557	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	88242557	88242557	C	T	SNP	GRM5	ENST00000305447	human	ensembl	74_37	-1	known	missense	c.2842	p.V948I	0.987	prints_GPCR_3_mtglu_rcpt_5	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_5,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_1,pfscan_GPCR_3_C	-	no_errors	GRM5	HGNC	ENSG00000168959				69	0	0	40	10	20
FAT3	0	genome.wustl.edu	37	11	92087537	92087537	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	92087537	92087537	C	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.2259	p.A753	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				190	0	0	81	44	35.2
KDM4D	0	genome.wustl.edu	37	11	94731056	94731056	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	94731056	94731056	G	T	SNP	KDM4D	ENST00000335080	human	ensembl	74_37	+1	known	missense	c.520	p.G174C	1.000	smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,pfam_TF_JmjN,smart_TF_JmjN,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4D	HGNC	ENSG00000186280				99	0	0	96	8	7.69231
MTMR2	0	genome.wustl.edu	37	11	95591764	95591764	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	95591764	95591764	A	G	SNP	MTMR2	ENST00000346299	human	ensembl	74_37	-1	known	silent	c.501	p.P167	0.411	NULL	pfam_Myotubularin-like_Pase_dom,pfam_GRAM,smart_GRAM,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR2	HGNC	ENSG00000087053				159	0	0	66	14	17.5
MAML2	0	genome.wustl.edu	37	11	95826235	95826235	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	95826235	95826235	G	A	SNP	MAML2	ENST00000524717	human	ensembl	74_37	-1	known	silent	c.960	p.P320	0.990	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC	ENSG00000184384				94	0	0	40	35	46.6667
NR1H4	0	genome.wustl.edu	37	12	100928723	100928723	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	100928723	100928723	G	A	SNP	NR1H4	ENST00000551379	human	ensembl	74_37	+1	known	silent	c.684	p.Q228	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt	-	no_errors	NR1H4	HGNC	ENSG00000012504				73	0	0	36	41	53.2468
UTP20	0	genome.wustl.edu	37	12	101736730	101736730	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	101736730	101736730	C	T	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	silent	c.4308	p.F1436	1.000	NULL	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800				90	0	0	36	27	42.8571
HCFC2	0	genome.wustl.edu	37	12	104480794	104480794	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	104480794	104480794	T	C	SNP	HCFC2	ENST00000229330	human	ensembl	74_37	+1	known	splice_site	c.1231+2	e8+2	0.967	-	-	-	no_errors	HCFC2	HGNC	ENSG00000111727				45	0	0	21	24	53.3333
FICD	0	genome.wustl.edu	37	12	108913186	108913186	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	108913186	108913186	G	A	SNP	FICD	ENST00000552695	human	ensembl	74_37	+1	known	silent	c.1311	p.S437	0.016	superfamily_Fido	pfam_Fido,superfamily_Fido,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	FICD	HGNC	ENSG00000198855				46	0	0	59	10	14.4928
ACACB	0	genome.wustl.edu	37	12	109702080	109702080	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	109702080	109702080	C	T	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	silent	c.6831	p.G2277	0.987	pfam_Carboxyl_trans,pfscan_COA_CT_C	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555				195	0	0	147	52	26.1307
CCDC63	0	genome.wustl.edu	37	12	111336860	111336860	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	111336860	111336860	G	A	SNP	CCDC63	ENST00000308208	human	ensembl	74_37	+1	known	missense	c.1273	p.A425T	0.984	NULL	NULL	-	no_errors	CCDC63	HGNC	ENSG00000173093				56	0	0	8	62	88.5714
TRAFD1	0	genome.wustl.edu	37	12	112578723	112578723	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	112578723	112578723	C	T	SNP	TRAFD1	ENST00000257604	human	ensembl	74_37	+1	known	missense	c.338	p.T113M	0.998	NULL	superfamily_TRAF-like	-	no_errors	TRAFD1	HGNC	ENSG00000135148				113	1	0.877193	22	88	80
HECTD4	0	genome.wustl.edu	37	12	112690240	112690240	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	112690240	112690240	T	C	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	silent	c.3024	p.T1008	0.980	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064				148	0	0	127	28	18.0645
MED13L	0	genome.wustl.edu	37	12	116453016	116453016	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	116453016	116453016	G	A	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	missense	c.1073	p.T358M	1.000	pfam_Mediator_Med13_N_met/fun	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066				113	0	0	14	73	83.908
ENSG00000256742	0	genome.wustl.edu	37	12	122018879	122018879	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	122018879	122018879	G	A	SNP	ENSG00000256742	ENST00000541574	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.039	-	-	-	no_errors	RP13-941N14.1	Clone_based_vega_gene	ENSG00000256742				55	0	0	3	48	94.1176
WDR66	0	genome.wustl.edu	37	12	122396951	122396951	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	122396951	122396951	G	A	SNP	WDR66	ENST00000288912	human	ensembl	74_37	+1	known	missense	c.2084	p.S695N	0.003	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR66	HGNC	ENSG00000158023				185	0	0	95	64	40.2516
HCAR1	0	genome.wustl.edu	37	12	123213848	123213848	+	Nonstop_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	123213848	123213848	A	G	SNP	HCAR1	ENST00000356987	human	ensembl	74_37	-1	known	nonstop	c.1039	p.*347R	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	HCAR1	HGNC	ENSG00000196917				79	0	0	63	5	7.35294
PITPNM2	0	genome.wustl.edu	37	12	123471070	123471070	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	123471070	123471070	G	A	SNP	PITPNM2	ENST00000320201	human	ensembl	74_37	-1	known	silent	c.3639	p.D1213	0.998	pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM2	HGNC	ENSG00000090975				21	0	0	21	5	19.2308
DNAH10	0	genome.wustl.edu	37	12	124414281	124414281	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	124414281	124414281	G	A	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.12233	p.G4078D	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653				31	0	0	21	4	16
ZNF664	0	genome.wustl.edu	37	12	124497439	124497439	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	124497439	124497439	A	G	SNP	ZNF664	ENST00000337815	human	ensembl	74_37	+1	known	missense	c.748	p.T250A	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF664	HGNC	ENSG00000179195				70	0	0	20	114	85.0746
LOH12CR1	0	genome.wustl.edu	37	12	12618642	12618642	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	12618642	12618642	A	C	SNP	LOH12CR1	ENST00000314565	human	ensembl	74_37	+1	known	missense	c.523	p.S175R	1.000	pfam_Tumour_suppressor_LOH1CR12	pfam_Tumour_suppressor_LOH1CR12	-	no_errors	LOH12CR1	HGNC	ENSG00000165714				80	0	0	50	40	44.4444
RIMBP2	0	genome.wustl.edu	37	12	130929750	130929750	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	130929750	130929750	A	T	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	missense	c.595	p.Y199N	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709				172	0	0	84	50	37.3134
EP400	0	genome.wustl.edu	37	12	132508398	132508398	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	132508398	132508398	G	A	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	silent	c.4875	p.P1625	0.003	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				65	0	0	56	4	6.66667
EP400	0	genome.wustl.edu	37	12	132551914	132551914	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	132551914	132551914	C	A	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	silent	c.8865	p.T2955	0.328	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				170	0	0	183	32	14.8837
NOC4L	0	genome.wustl.edu	37	12	132632470	132632470	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	132632470	132632470	G	A	SNP	NOC4L	ENST00000330579	human	ensembl	74_37	+1	known	missense	c.649	p.V217M	0.493	NULL	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	NOC4L	HGNC	ENSG00000184967				16	0	0	5	18	78.2609
NOC4L	0	genome.wustl.edu	37	12	132633428	132633428	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	132633428	132633428	G	A	SNP	NOC4L	ENST00000330579	human	ensembl	74_37	+1	known	missense	c.889	p.A297T	1.000	NULL	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	NOC4L	HGNC	ENSG00000184967				25	0	0	19	6	24
WBP11	0	genome.wustl.edu	37	12	14952595	14952595	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	14952595	14952595	C	T	SNP	WBP11	ENST00000261167	human	ensembl	74_37	-1	known	missense	c.164	p.R55Q	1.000	pfam_WW_dom-bd_prot_11	pfam_WW_dom-bd_prot_11	-	no_errors	WBP11	HGNC	ENSG00000084463				36	0	0	18	6	25
IQSEC3	0	genome.wustl.edu	37	12	176577	176577	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	176577	176577	A	G	SNP	IQSEC3	ENST00000326261	human	ensembl	74_37	+1	known	missense	c.529	p.K177E	1.000	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC3	HGNC	ENSG00000120645				42	0	0	45	9	16.6667
CACNA2D4	0	genome.wustl.edu	37	12	1987496	1987496	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	1987496	1987496	G	A	SNP	CACNA2D4	ENST00000444595	human	ensembl	74_37	-1	known	nonsense	c.1756	p.R586*	0.875	NULL	pfam_VWA_N,pfam_VWF_A,pfam_Cache_domain,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D4	HGNC	ENSG00000151062				22	0	0	9	3	25
CACNA1C	0	genome.wustl.edu	37	12	2786947	2786947	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	2786947	2786947	A	G	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	missense	c.5005	p.I1669V	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067				52	0	0	52	9	14.7541
CAPRIN2	0	genome.wustl.edu	37	12	30881656	30881656	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	30881656	30881656	A	G	SNP	CAPRIN2	ENST00000251071	human	ensembl	74_37	-1	known	missense	c.1708	p.W570R	1.000	NULL	pfam_Caprin-1_C,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CAPRIN2	HGNC	ENSG00000110888				106	0	0	68	13	16.0494
METTL20	0	genome.wustl.edu	37	12	31819052	31819052	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	31819052	31819052	G	T	SNP	METTL20	ENST00000357721	human	ensembl	74_37	+1	known	nonsense	c.346	p.G116*	1.000	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Nicotinamide_N-MeTfrase-like	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL20	HGNC	ENSG00000139160				59	0	0	48	12	20
PKP2	0	genome.wustl.edu	37	12	32945632	32945632	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	32945632	32945632	G	A	SNP	PKP2	ENST00000070846	human	ensembl	74_37	-1	known	silent	c.2523	p.S841	0.727	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP2	HGNC	ENSG00000057294				131	0	0	32	36	52.9412
PKP2	0	genome.wustl.edu	37	12	33030914	33030914	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	33030914	33030914	C	T	SNP	PKP2	ENST00000070846	human	ensembl	74_37	-1	known	silent	c.900	p.T300	0.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP2	HGNC	ENSG00000057294				97	0	0	82	31	27.4336
SLC6A13	0	genome.wustl.edu	37	12	344273	344273	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	344273	344273	G	A	SNP	SLC6A13	ENST00000343164	human	ensembl	74_37	-1	known	missense	c.814	p.R272C	0.985	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT2	-	no_errors	SLC6A13	HGNC	ENSG00000010379				124	0	0	114	6	5
PRMT8	0	genome.wustl.edu	37	12	3701471	3701471	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	3701471	3701471	G	A	SNP	PRMT8	ENST00000382622	human	ensembl	74_37	+1	known	missense	c.1054	p.E352K	1.000	pfam_Arg_MeTrfase	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT8	HGNC	ENSG00000111218				143	0	0	135	55	28.9474
SLC48A1	0	genome.wustl.edu	37	12	48174056	48174056	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	48174056	48174056	G	A	SNP	SLC48A1	ENST00000442218	human	ensembl	74_37	+1	known	missense	c.433	p.D145N	1.000	NULL	NULL	-	no_errors	SLC48A1	HGNC	ENSG00000211584				128	0	0	91	5	5.20833
C12orf68	0	genome.wustl.edu	37	12	48578233	48578233	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	48578233	48578233	A	G	SNP	C12orf68	ENST00000316554	human	ensembl	74_37	+1	known	missense	c.328	p.S110G	1.000	NULL	NULL	-	no_errors	C12orf68	HGNC	ENSG00000177875				35	0	0	19	15	44.1176
ADCY6	0	genome.wustl.edu	37	12	49170050	49170050	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	49170050	49170050	G	T	SNP	ADCY6	ENST00000307885	human	ensembl	74_37	-1	known	missense	c.1619	p.A540E	0.995	pfam_A/G_cyclase,superfamily_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY6	HGNC	ENSG00000174233				134	0	0	83	33	28.4483
CCDC65	0	genome.wustl.edu	37	12	49312165	49312165	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	49312165	49312165	T	C	SNP	CCDC65	ENST00000266984	human	ensembl	74_37	+1	known	silent	c.717	p.D239	0.982	NULL	NULL	-	no_errors	CCDC65	HGNC	ENSG00000139537				104	0	0	114	8	6.55738
KMT2D	0	genome.wustl.edu	37	12	49426313	49426313	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	49426313	49426313	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.12175	p.A4059T	0.016	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				15	0	0	14	6	30
SPATS2	0	genome.wustl.edu	37	12	49883337	49883337	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	49883337	49883337	A	G	SNP	SPATS2	ENST00000321898	human	ensembl	74_37	+1	known	silent	c.195	p.T65	0.998	superfamily_UBA-like	pfam_DUF1387,superfamily_UBA-like	-	no_errors	SPATS2	HGNC	ENSG00000123352				63	0	0	51	12	19.0476
FAM186B	0	genome.wustl.edu	37	12	49993393	49993393	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	49993393	49993393	C	T	SNP	FAM186B	ENST00000257894	human	ensembl	74_37	-1	known	missense	c.2030	p.S677N	0.002	NULL	NULL	-	no_errors	FAM186B	HGNC	ENSG00000135436				64	0	0	37	40	51.9481
KCNA1	0	genome.wustl.edu	37	12	5020592	5020592	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	5020592	5020592	G	A	SNP	KCNA1	ENST00000382545	human	ensembl	74_37	+1	known	silent	c.48	p.P16	0.978	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv1.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1.3	-	no_errors	KCNA1	HGNC	ENSG00000111262				52	0	0	38	45	54.2169
KCNA1	0	genome.wustl.edu	37	12	5021140	5021140	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	5021140	5021140	C	T	SNP	KCNA1	ENST00000382545	human	ensembl	74_37	+1	known	missense	c.596	p.T199M	0.394	prints_K_chnl_volt-dep_Kv1.1	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv1.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1.3	-	no_errors	KCNA1	HGNC	ENSG00000111262				78	0	0	97	15	13.3929
KCNA1	0	genome.wustl.edu	37	12	5021284	5021284	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	5021284	5021284	C	T	SNP	KCNA1	ENST00000382545	human	ensembl	74_37	+1	known	missense	c.740	p.T247M	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv1.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1.3	-	no_errors	KCNA1	HGNC	ENSG00000111262				116	0	0	44	54	55.102
LETMD1	0	genome.wustl.edu	37	12	51442948	51442948	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	51442948	51442948	T	C	SNP	LETMD1	ENST00000262055	human	ensembl	74_37	+1	known	missense	c.254	p.L85P	0.999	pfam_LETM1	pfam_LETM1	-	no_errors	LETMD1	HGNC	ENSG00000050426				73	0	0	34	14	29.1667
CSAD	0	genome.wustl.edu	37	12	53554063	53554063	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	53554063	53554063	A	C	SNP	CSAD	ENST00000267085	human	ensembl	74_37	-1	known	missense	c.1088	p.L363R	0.999	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,pfam_Aminotrans_V/Cys_dSase,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	CSAD	HGNC	ENSG00000139631				108	0	0	121	8	6.20155
MAP3K12	0	genome.wustl.edu	37	12	53878989	53878989	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	53878989	53878989	G	A	SNP	MAP3K12	ENST00000267079	human	ensembl	74_37	-1	known	silent	c.891	p.G297	0.653	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K12	HGNC	ENSG00000139625				104	0	0	100	7	6.54206
HOXC10	0	genome.wustl.edu	37	12	54379554	54379554	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	54379554	54379554	G	A	SNP	HOXC10	ENST00000303460	human	ensembl	74_37	+1	known	missense	c.511	p.E171K	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXC10	HGNC	ENSG00000180818				55	0	0	75	6	7.40741
HOXC5	0	genome.wustl.edu	37	12	54426994	54426994	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	54426994	54426994	G	A	SNP	HOXC5	ENST00000312492	human	ensembl	74_37	+1	known	missense	c.88	p.A30T	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXC5	HGNC	ENSG00000172789				102	0	0	61	70	53.4351
HOXC4	0	genome.wustl.edu	37	12	54448771	54448771	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	54448771	54448771	C	T	SNP	HOXC4	ENST00000430889	human	ensembl	74_37	+1	known	silent	c.577	p.L193	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXC4	Uniprot_gn	ENSG00000273266				48	0	0	57	24	29.6296
NCKAP1L	0	genome.wustl.edu	37	12	54893228	54893228	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	54893228	54893228	C	T	SNP	NCKAP1L	ENST00000293373	human	ensembl	74_37	+1	known	silent	c.192	p.N64	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1,superfamily_Nucl_hormone_rcpt_ligand-bd	-	no_errors	NCKAP1L	HGNC	ENSG00000123338				65	0	0	46	15	24.5902
PPP1R1A	0	genome.wustl.edu	37	12	54971306	54971306	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	54971306	54971306	C	T	SNP	PPP1R1A	ENST00000547431	human	ensembl	74_37	-1	novel	missense	c.328	p.V110M	0.001	NULL	pfam_PPI_1DARPP-32	-	no_errors	PPP1R1A	HGNC	ENSG00000135447				95	0	0	86	44	33.8462
OR6C65	0	genome.wustl.edu	37	12	55795200	55795200	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	55795200	55795200	A	G	SNP	OR6C65	ENST00000379665	human	ensembl	74_37	+1	known	silent	c.888	p.K296	0.011	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR6C65	HGNC	ENSG00000205328				43	0	0	40	13	24.5283
RAB5B	0	genome.wustl.edu	37	12	56384490	56384490	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	56384490	56384490	T	C	SNP	RAB5B	ENST00000360299	human	ensembl	74_37	+1	known	missense	c.340	p.W114R	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB5B	HGNC	ENSG00000111540				161	0	0	150	12	7.40741
IKZF4	0	genome.wustl.edu	37	12	56428548	56428548	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	56428548	56428548	T	C	SNP	IKZF4	ENST00000262032	human	ensembl	74_37	+1	known	silent	c.1191	p.P397	0.028	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF4	HGNC	ENSG00000123411				97	0	0	75	20	21.0526
PAN2	0	genome.wustl.edu	37	12	56722284	56722284	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	56722284	56722284	G	A	SNP	PAN2	ENST00000425394	human	ensembl	74_37	-1	known	missense	c.424	p.R142C	1.000	superfamily_WD40_repeat_dom	pfam_Exonuclease_RNaseT/DNA_pol3,pfam_Peptidase_C19/C67,superfamily_RNaseH-like_dom,superfamily_WD40_repeat_dom,smart_Exonuclease,pfscan_Peptidase_C19/C67	-	no_errors	PAN2	HGNC	ENSG00000135473				135	0	0	119	46	27.8788
MIP	0	genome.wustl.edu	37	12	56845068	56845068	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	56845068	56845068	A	C	SNP	MIP	ENST00000257979	human	ensembl	74_37	-1	known	missense	c.788	p.L263R	1.000	NULL	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	-	no_errors	MIP	HGNC	ENSG00000135517				86	0	0	61	6	8.95522
MIP	0	genome.wustl.edu	37	12	56848194	56848194	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	56848194	56848194	A	C	SNP	MIP	ENST00000257979	human	ensembl	74_37	-1	known	missense	c.204	p.N68K	0.993	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	-	no_errors	MIP	HGNC	ENSG00000135517				94	0	0	69	58	45.6693
MIR1228	0	genome.wustl.edu	37	12	57588316	57588316	+	RNA	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	57588316	57588316	T	A	SNP	MIR1228	ENST00000408438	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR1228	HGNC	ENSG00000221365				155	0	0	156	38	19.5876
VWF	0	genome.wustl.edu	37	12	6101113	6101113	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	6101113	6101113	C	T	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.6670	p.V2224M	0.000	pirsf_VWF,pfam_TIL_dom,superfamily_TIL_dom	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				42	0	0	56	7	11.1111
USP15	0	genome.wustl.edu	37	12	62785090	62785090	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	62785090	62785090	C	T	SNP	USP15	ENST00000280377	human	ensembl	74_37	+1	known	missense	c.2114	p.T705M	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,superfamily_RNA3'P_cycl/enolpyr_Trfase_a/b,smart_Pept_C19_DUSP,pfscan_Peptidase_C19/C67	-	no_errors	USP15	HGNC	ENSG00000135655				100	0	0	42	34	44.7368
SCNN1A	0	genome.wustl.edu	37	12	6465108	6465108	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	6465108	6465108	G	A	SNP	SCNN1A	ENST00000536087	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SCNN1A	HGNC	ENSG00000111319				50	0	0	49	9	15.5172
XPOT	0	genome.wustl.edu	37	12	64813965	64813965	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	64813965	64813965	C	T	SNP	XPOT	ENST00000332707	human	ensembl	74_37	+1	known	missense	c.605	p.T202M	1.000	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPOT	HGNC	ENSG00000184575				104	0	0	52	11	17.4603
XPOT	0	genome.wustl.edu	37	12	64819119	64819119	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	64819119	64819119	T	C	SNP	XPOT	ENST00000332707	human	ensembl	74_37	+1	known	missense	c.1454	p.L485P	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPOT	HGNC	ENSG00000184575				105	0	0	52	46	46.9388
LEMD3	0	genome.wustl.edu	37	12	65633992	65633992	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	65633992	65633992	C	T	SNP	LEMD3	ENST00000308330	human	ensembl	74_37	+1	known	silent	c.2100	p.R700	0.994	pfam_Inner-Nucl-membr_MAN1	pfam_Inner-Nucl-membr_MAN1,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom	-	no_errors	LEMD3	HGNC	ENSG00000174106				136	0	0	70	8	10.2564
CHD4	0	genome.wustl.edu	37	12	6701093	6701093	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	6701093	6701093	C	T	SNP	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	missense	c.3079	p.V1027M	0.999	pfam_HDA_complex_subunit-2/3,superfamily_P-loop_NTPase	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642				67	0	0	64	26	28.8889
DYRK2	0	genome.wustl.edu	37	12	68050922	68050922	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	68050922	68050922	C	T	SNP	DYRK2	ENST00000344096	human	ensembl	74_37	+1	known	missense	c.235	p.H79Y	0.941	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK2	HGNC	ENSG00000127334				78	0	0	48	44	47.8261
NUP107	0	genome.wustl.edu	37	12	69085852	69085852	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	69085852	69085852	C	A	SNP	NUP107	ENST00000229179	human	ensembl	74_37	+1	known	silent	c.408	p.I136	0.967	NULL	pfam_Nup84_Nup100	-	no_errors	NUP107	HGNC	ENSG00000111581				86	0	0	70	5	6.66667
NUP107	0	genome.wustl.edu	37	12	69107564	69107564	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	69107564	69107564	T	C	SNP	NUP107	ENST00000229179	human	ensembl	74_37	+1	known	silent	c.945	p.S315	0.983	pfam_Nup84_Nup100	pfam_Nup84_Nup100	-	no_errors	NUP107	HGNC	ENSG00000111581				110	0	0	64	12	15.7895
LEPREL2	0	genome.wustl.edu	37	12	6946910	6946910	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	6946910	6946910	C	T	SNP	LEPREL2	ENST00000396725	human	ensembl	74_37	+1	known	missense	c.1723	p.R575C	1.000	smart_Pro_4_hyd_alph	smart_Pro_4_hyd_alph	-	no_errors	LEPREL2	HGNC	ENSG00000110811				31	0	0	33	5	13.1579
USP5	0	genome.wustl.edu	37	12	6970756	6970756	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	6970756	6970756	C	A	SNP	USP5	ENST00000229268	human	ensembl	74_37	+1	known	missense	c.1648	p.L550M	0.989	pfam_Peptidase_C19/C67,pirsf_Ubiquitinyl_hydrolase,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_UBA/Ts_N,pfam_Znf_UBP,superfamily_UBA-like,smart_Znf_UBP,smart_UBA/transl_elong_EF1B_N_euk,pirsf_Ubiquitinyl_hydrolase,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP5	HGNC	ENSG00000111667				83	0	0	58	15	20.5479
KCNC2	0	genome.wustl.edu	37	12	75601576	75601576	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	75601576	75601576	G	A	SNP	KCNC2	ENST00000549446	human	ensembl	74_37	-1	known	missense	c.188	p.P63L	0.950	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC2	HGNC	ENSG00000166006				17	0	0	22	30	57.6923
NAV3	0	genome.wustl.edu	37	12	78542637	78542637	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	78542637	78542637	C	T	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.4723	p.R1575W	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798				50	0	0	25	7	21.875
MYF6	0	genome.wustl.edu	37	12	81101720	81101720	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	81101720	81101720	C	T	SNP	MYF6	ENST00000228641	human	ensembl	74_37	+1	known	silent	c.222	p.P74	0.001	pfam_Basic,smart_Basic	pfam_Basic,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYF6	HGNC	ENSG00000111046				94	0	0	95	5	5
METTL25	0	genome.wustl.edu	37	12	82871071	82871071	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	82871071	82871071	A	G	SNP	METTL25	ENST00000248306	human	ensembl	74_37	+1	known	silent	c.1659	p.V553	0.995	NULL	NULL	-	no_errors	METTL25	HGNC	ENSG00000127720				122	0	0	59	13	18.0556
MGAT4C	0	genome.wustl.edu	37	12	86373627	86373627	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	86373627	86373627	G	A	SNP	MGAT4C	ENST00000393205	human	ensembl	74_37	-1	known	missense	c.964	p.R322C	1.000	pfam_Glyco_transf_54	pfam_Glyco_transf_54,superfamily_LSM_dom	-	no_errors	MGAT4C	HGNC	ENSG00000182050				90	0	0	46	32	41.0256
MGAT4C	0	genome.wustl.edu	37	12	86373679	86373679	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	86373679	86373679	A	C	SNP	MGAT4C	ENST00000393205	human	ensembl	74_37	-1	known	missense	c.912	p.F304L	1.000	pfam_Glyco_transf_54	pfam_Glyco_transf_54,superfamily_LSM_dom	-	no_errors	MGAT4C	HGNC	ENSG00000182050				64	0	0	66	4	5.71429
CEP290	0	genome.wustl.edu	37	12	88478553	88478553	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	88478553	88478553	A	G	SNP	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	missense	c.4520	p.L1507P	1.000	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707				50	0	0	25	12	32.4324
TMCC3	0	genome.wustl.edu	37	12	94975970	94975970	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	94975970	94975970	T	G	SNP	TMCC3	ENST00000261226	human	ensembl	74_37	-1	known	missense	c.423	p.R141S	0.585	pfam_Predicted_TM_coiled-coil_2	pfam_Predicted_TM_coiled-coil_2	-	no_errors	TMCC3	HGNC	ENSG00000057704				106	0	0	67	17	20.2381
METAP2	0	genome.wustl.edu	37	12	95887859	95887859	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	95887859	95887859	T	C	SNP	METAP2	ENST00000323666	human	ensembl	74_37	+1	known	silent	c.456	p.S152	1.000	superfamily_Pept_M24_structural-domain	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP2	-	no_errors	METAP2	HGNC	ENSG00000111142				77	0	0	22	37	62.7119
CD69	0	genome.wustl.edu	37	12	9907761	9907761	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	9907761	9907761	T	C	SNP	CD69	ENST00000228434	human	ensembl	74_37	-1	known	missense	c.284	p.K95R	0.998	pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CD69	HGNC	ENSG00000110848				81	0	0	62	16	20.5128
NALCN-AS1	0	genome.wustl.edu	37	13	101707609	101707609	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	101707609	101707609	G	A	SNP	NALCN-AS1	ENST00000457843	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NALCN-AS1	HGNC	ENSG00000233009				31	0	0	55	7	11.2903
NALCN	0	genome.wustl.edu	37	13	101936360	101936360	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	101936360	101936360	T	G	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.1058	p.E353A	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				53	0	0	45	3	6.25
COL4A1	0	genome.wustl.edu	37	13	110828812	110828812	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	110828812	110828812	A	C	SNP	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	missense	c.3017	p.L1006R	0.910	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498				110	0	0	57	4	6.55738
SOX1	0	genome.wustl.edu	37	13	112722252	112722252	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	112722252	112722252	G	A	SNP	SOX1	ENST00000330949	human	ensembl	74_37	+1	known	missense	c.280	p.E94K	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX1	HGNC	ENSG00000182968				62	0	0	75	23	23.4694
ATP11A	0	genome.wustl.edu	37	13	113512204	113512204	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	113512204	113512204	A	G	SNP	ATP11A	ENST00000375630	human	ensembl	74_37	+1	known	missense	c.2491	p.S831G	1.000	superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11A	HGNC	ENSG00000068650				79	0	0	37	38	50.6667
MCF2L	0	genome.wustl.edu	37	13	113699656	113699656	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	113699656	113699656	C	T	SNP	MCF2L	ENST00000375604	human	ensembl	74_37	+1	known	missense	c.521	p.A174V	0.967	superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_DH-domain,pfam_Spectrin_repeat,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	MCF2L	HGNC	ENSG00000126217				68	0	0	91	9	9
ADPRHL1	0	genome.wustl.edu	37	13	114098772	114098772	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	114098772	114098772	A	C	SNP	ADPRHL1	ENST00000375418	human	ensembl	74_37	-1	known	missense	c.347	p.L116R	1.000	pfam_Ribosyl_crysJ1,superfamily_Ribosyl_crysJ1,pirsf_ADP-ribosylarg_hydro	pfam_Ribosyl_crysJ1,superfamily_Ribosyl_crysJ1,pirsf_ADP-ribosylarg_hydro	-	no_errors	ADPRHL1	HGNC	ENSG00000153531				322	0	0	289	59	16.954
TUBA3C	0	genome.wustl.edu	37	13	19753647	19753647	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	19753647	19753647	G	A	SNP	TUBA3C	ENST00000400113	human	ensembl	74_37	-1	known	silent	c.60	p.C20	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,prints_Alpha_tubulin,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033				145	0	0	76	73	48.9933
ZMYM2	0	genome.wustl.edu	37	13	20608520	20608520	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	20608520	20608520	G	A	SNP	ZMYM2	ENST00000382869	human	ensembl	74_37	+1	known	missense	c.2095	p.V699I	1.000	smart_TRASH_dom	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM2	HGNC	ENSG00000121741				106	0	0	35	43	55.1282
PABPC3	0	genome.wustl.edu	37	13	25670498	25670498	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	25670498	25670498	C	T	SNP	PABPC3	ENST00000281589	human	ensembl	74_37	+1	known	silent	c.162	p.Y54	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846				96	0	0	128	26	16.8831
PABPC3	0	genome.wustl.edu	37	13	25671157	25671157	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	25671157	25671157	C	T	SNP	PABPC3	ENST00000281589	human	ensembl	74_37	+1	known	missense	c.821	p.T274M	0.997	tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846				131	0	0	142	59	29.3532
GPR12	0	genome.wustl.edu	37	13	27333504	27333504	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	27333504	27333504	A	G	SNP	GPR12	ENST00000381436	human	ensembl	74_37	-1	known	missense	c.461	p.V154A	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR_3/6/12_orphan,prints_GPR12,prints_GPCR_Rhodpsn	-	no_errors	GPR12	HGNC	ENSG00000132975				51	0	0	49	56	53.3333
SNORD102	0	genome.wustl.edu	37	13	27829237	27829237	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	27829237	27829237	C	T	SNP	SNORD102	ENST00000384769	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORD102	HGNC	ENSG00000207500				68	0	0	23	28	54.902
PAN3	0	genome.wustl.edu	37	13	28834624	28834624	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	28834624	28834624	A	G	SNP	PAN3	ENST00000380958	human	ensembl	74_37	+1	known	missense	c.1289	p.H430R	1.000	NULL	superfamily_Kinase-like_dom,smart_Znf_CCCH,pfscan_Prot_kinase_dom	-	no_errors	PAN3	HGNC	ENSG00000152520				113	0	0	102	7	6.42202
FLT1	0	genome.wustl.edu	37	13	28877304	28877304	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	28877304	28877304	C	T	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	silent	c.4017	p.*1339	0.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755				68	0	0	76	5	6.17284
B3GALTL	0	genome.wustl.edu	37	13	31850906	31850906	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	31850906	31850906	G	A	SNP	B3GALTL	ENST00000343307	human	ensembl	74_37	+1	known	missense	c.848	p.R283K	0.998	pfam_Fringe-like	pfam_Fringe-like	-	no_errors	B3GALTL	HGNC	ENSG00000187676				53	0	0	21	8	27.5862
BRCA2	0	genome.wustl.edu	37	13	32972674	32972674	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	32972674	32972674	G	A	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.10024	p.E3342K	1.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618				58	0	0	48	21	30.4348
NBEA	0	genome.wustl.edu	37	13	35733215	35733215	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	35733215	35733215	G	T	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.2907	p.E969D	0.998	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				51	0	0	80	6	6.97674
SPG20	0	genome.wustl.edu	37	13	36909285	36909285	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	36909285	36909285	A	G	SNP	SPG20	ENST00000355182	human	ensembl	74_37	-1	known	missense	c.683	p.V228A	1.000	NULL	pfam_Senescence/spartin,pfam_MIT,smart_MIT	-	no_errors	SPG20	HGNC	ENSG00000133104				83	0	0	42	51	54.8387
FREM2	0	genome.wustl.edu	37	13	39261662	39261662	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	39261662	39261662	G	A	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.181	p.A61T	0.024	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893				11	0	0	23	6	20.6897
COG6	0	genome.wustl.edu	37	13	40229900	40229900	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	40229900	40229900	G	A	SNP	COG6	ENST00000455146	human	ensembl	74_37	+1	known	missense	c.37	p.A13T	0.000	NULL	pfam_COG6	-	no_errors	COG6	HGNC	ENSG00000133103				15	0	0	20	4	16.6667
VWA8	0	genome.wustl.edu	37	13	42465631	42465631	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	42465631	42465631	C	T	SNP	VWA8	ENST00000379310	human	ensembl	74_37	-1	known	silent	c.576	p.L192	0.995	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	pfam_ATPase_dyneun-rel_AAA,pfam_VWF_A,superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA8	HGNC	ENSG00000102763				131	0	0	71	72	50.3497
DGKH	0	genome.wustl.edu	37	13	42734149	42734149	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	42734149	42734149	C	T	SNP	DGKH	ENST00000337343	human	ensembl	74_37	+1	known	silent	c.732	p.V244	0.011	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKH	HGNC	ENSG00000102780				58	0	0	20	27	57.4468
DGKH	0	genome.wustl.edu	37	13	42773797	42773797	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	42773797	42773797	A	G	SNP	DGKH	ENST00000337343	human	ensembl	74_37	+1	known	missense	c.2381	p.H794R	1.000	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKH	HGNC	ENSG00000102780				35	0	0	16	6	27.2727
FAM124A	0	genome.wustl.edu	37	13	51825756	51825756	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	51825756	51825756	C	T	SNP	FAM124A	ENST00000280057	human	ensembl	74_37	+1	known	missense	c.361	p.R121W	0.757	NULL	NULL	-	no_errors	FAM124A	HGNC	ENSG00000150510				17	0	0	34	4	10.5263
LOC101930578	0	genome.wustl.edu	37	13	52864009	52864009	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	52864009	52864009	C	T	SNP	LOC101930578	ENST00000451298	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.088	-	-	-	no_errors	RP11-248G5.8	Clone_based_vega_gene	ENSG00000217576				24	0	0	27	6	18.1818
PCDH8	0	genome.wustl.edu	37	13	53420246	53420246	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	53420246	53420246	G	A	SNP	PCDH8	ENST00000377942	human	ensembl	74_37	-1	known	missense	c.2326	p.R776C	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH8	HGNC	ENSG00000136099				102	0	0	58	29	33.3333
PCDH8	0	genome.wustl.edu	37	13	53420426	53420426	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	53420426	53420426	G	A	SNP	PCDH8	ENST00000377942	human	ensembl	74_37	-1	known	missense	c.2146	p.R716C	0.581	smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH8	HGNC	ENSG00000136099				20	0	0	21	9	30
PCDH17	0	genome.wustl.edu	37	13	58208859	58208859	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	58208859	58208859	G	A	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.2179	p.A727T	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946				72	0	0	66	59	47.2
PCDH17	0	genome.wustl.edu	37	13	58298855	58298855	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	58298855	58298855	C	A	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	nonsense	c.2907	p.Y969*	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946				76	0	0	27	42	60.8696
PCDH9	0	genome.wustl.edu	37	13	67802452	67802452	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	67802452	67802452	C	T	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	missense	c.121	p.G41R	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226				105	0	0	38	51	57.3034
KLHL1	0	genome.wustl.edu	37	13	70514320	70514320	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	70514320	70514320	G	A	SNP	KLHL1	ENST00000377844	human	ensembl	74_37	-1	known	missense	c.866	p.A289V	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL1	HGNC	ENSG00000150361				35	0	0	30	17	36.1702
LMO7	0	genome.wustl.edu	37	13	76429412	76429412	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	76429412	76429412	C	T	SNP	LMO7	ENST00000341547	human	ensembl	74_37	+1	known	missense	c.3832	p.R1278C	1.000	pfscan_Znf_LIM	pfam_CH-domain,pfam_PDZ,pfam_Znf_LIM,superfamily_CH-domain,superfamily_PDZ,smart_CH-domain,smart_PDZ,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,pfscan_PDZ,prints_SM22_calponin	-	no_errors	LMO7	HGNC	ENSG00000136153				78	0	0	42	7	14.2857
MYCBP2	0	genome.wustl.edu	37	13	77670602	77670602	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	77670602	77670602	C	T	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	missense	c.9799	p.A3267T	1.000	superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810				67	0	0	53	16	23.1884
SLITRK1	0	genome.wustl.edu	37	13	84453795	84453795	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	84453795	84453795	G	T	SNP	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	silent	c.1848	p.S616	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235				49	0	0	52	4	7.14286
UGGT2	0	genome.wustl.edu	37	13	96555238	96555238	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	96555238	96555238	G	T	SNP	UGGT2	ENST00000376747	human	ensembl	74_37	-1	known	missense	c.2372	p.S791Y	1.000	NULL	pfam_UDP-g_GGtrans,pfam_Glyco_trans_8	-	no_errors	UGGT2	HGNC	ENSG00000102595				85	0	0	69	4	5.47945
OXGR1	0	genome.wustl.edu	37	13	97639850	97639850	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	97639850	97639850	A	G	SNP	OXGR1	ENST00000298440	human	ensembl	74_37	-1	known	missense	c.164	p.I55T	0.804	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	OXGR1	HGNC	ENSG00000165621				22	0	0	28	22	44
RNF113B	0	genome.wustl.edu	37	13	98828988	98828988	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	98828988	98828988	G	A	SNP	RNF113B	ENST00000267291	human	ensembl	74_37	-1	known	missense	c.503	p.S168F	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF113B	HGNC	ENSG00000139797				75	0	0	68	36	34.6154
CYP46A1	0	genome.wustl.edu	37	14	100192567	100192567	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	100192567	100192567	T	A	SNP	CYP46A1	ENST00000261835	human	ensembl	74_37	+1	known	missense	c.1306	p.S436T	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP46A1	HGNC	ENSG00000036530				88	0	0	70	5	6.66667
DYNC1H1	0	genome.wustl.edu	37	14	102455091	102455091	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	102455091	102455091	C	T	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	nonsense	c.2770	p.Q924*	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102				92	0	0	52	22	29.7297
DYNC1H1	0	genome.wustl.edu	37	14	102493762	102493762	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	102493762	102493762	C	T	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	missense	c.8929	p.R2977W	0.979	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102				105	0	0	75	7	8.53659
ASPG	0	genome.wustl.edu	37	14	104573661	104573661	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	104573661	104573661	T	C	SNP	ASPG	ENST00000455920	human	ensembl	74_37	+1	known	missense	c.1412	p.L471P	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Asparaginase/glutaminase,pfam_Ankyrin_rpt,superfamily_Asparaginase/glutaminase,superfamily_Ankyrin_rpt-contain_dom,smart_Asparaginase/glutaminase,smart_Ankyrin_rpt,prints_Asparaginase/glutaminase,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_AsnASEI	-	no_errors	ASPG	HGNC	ENSG00000166183				26	0	0	16	11	40.7407
JAG2	0	genome.wustl.edu	37	14	105613019	105613019	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	105613019	105613019	G	A	SNP	JAG2	ENST00000331782	human	ensembl	74_37	-1	known	missense	c.2522	p.T841M	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	JAG2	HGNC	ENSG00000184916				46	0	0	41	8	16.3265
OR4K13	0	genome.wustl.edu	37	14	20502296	20502296	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	20502296	20502296	G	A	SNP	OR4K13	ENST00000315693	human	ensembl	74_37	-1	known	silent	c.622	p.L208	0.002	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K13	HGNC	ENSG00000176253				94	0	0	61	47	43.5185
APEX1	0	genome.wustl.edu	37	14	20923873	20923873	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	20923873	20923873	G	A	SNP	APEX1	ENST00000554325	human	ensembl	74_37	+1	known	missense	c.69	p.M23I	0.000	NULL	NULL	-	no_errors	APEX1	HGNC	ENSG00000100823				103	0	0	37	18	32.7273
SUPT16H	0	genome.wustl.edu	37	14	21829015	21829015	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	21829015	21829015	G	A	SNP	SUPT16H	ENST00000216297	human	ensembl	74_37	-1	known	silent	c.2046	p.A682	0.993	pfam_FACT_Spt16p	pfam_FACT_Spt16p,pfam_Pept_M24_structural-domain,pfam_DUF1747,superfamily_Pept_M24_structural-domain	-	no_errors	SUPT16H	HGNC	ENSG00000092201				87	0	0	44	34	43.5897
CHD8	0	genome.wustl.edu	37	14	21896212	21896212	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	21896212	21896212	G	A	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	missense	c.1417	p.R473C	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888				137	0	0	72	44	37.931
MMP14	0	genome.wustl.edu	37	14	23312625	23312625	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	23312625	23312625	A	G	SNP	MMP14	ENST00000311852	human	ensembl	74_37	+1	known	missense	c.848	p.Y283C	1.000	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,prints_Pept_M10A	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP14	HGNC	ENSG00000157227				146	0	0	120	7	5.51181
LRP10	0	genome.wustl.edu	37	14	23345494	23345494	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	23345494	23345494	T	C	SNP	LRP10	ENST00000359591	human	ensembl	74_37	+1	known	missense	c.1337	p.V446A	0.979	superfamily_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP10	HGNC	ENSG00000197324				106	0	0	76	56	42.4242
IL25	0	genome.wustl.edu	37	14	23845070	23845070	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	23845070	23845070	G	A	SNP	IL25	ENST00000329715	human	ensembl	74_37	+1	known	missense	c.515	p.R172Q	1.000	pfam_IL-17_fam	pfam_IL-17_fam	-	no_errors	IL25	HGNC	ENSG00000166090				126	0	0	112	13	10.4
LRRC16B	0	genome.wustl.edu	37	14	24534900	24534900	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	24534900	24534900	G	A	SNP	LRRC16B	ENST00000342740	human	ensembl	74_37	+1	known	missense	c.3466	p.G1156S	0.068	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648				148	0	0	101	35	25.7353
PCK2	0	genome.wustl.edu	37	14	24572735	24572735	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	24572735	24572735	C	T	SNP	PCK2	ENST00000216780	human	ensembl	74_37	+1	known	silent	c.1485	p.H495	0.077	pfam_PEP_carboxykinase_GTP,pirsf_PEP_carboxykinase_GTP	pfam_PEP_carboxykinase_GTP,superfamily_PEP_carboxykinase_N,pirsf_PEP_carboxykinase_GTP	-	no_errors	PCK2	HGNC	ENSG00000100889				116	0	0	55	29	34.5238
DHRS1	0	genome.wustl.edu	37	14	24760809	24760809	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	24760809	24760809	G	A	SNP	DHRS1	ENST00000288111	human	ensembl	74_37	-1	known	missense	c.677	p.A226V	0.063	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DHB_DH	-	no_errors	DHRS1	HGNC	ENSG00000157379				250	0	0	223	14	5.90717
COCH	0	genome.wustl.edu	37	14	31354747	31354747	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	31354747	31354747	T	A	SNP	COCH	ENST00000216361	human	ensembl	74_37	+1	known	missense	c.881	p.V294D	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_LCCL,superfamily_LCCL,smart_LCCL,smart_VWF_A,pfscan_LCCL,pfscan_VWF_A	-	no_errors	COCH	HGNC	ENSG00000100473				104	0	0	48	9	15.7895
INSM2	0	genome.wustl.edu	37	14	36003677	36003677	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	36003677	36003677	G	A	SNP	INSM2	ENST00000307169	human	ensembl	74_37	+1	known	silent	c.219	p.S73	0.010	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	INSM2	HGNC	ENSG00000168348				12	0	0	23	5	17.8571
DNAAF2	0	genome.wustl.edu	37	14	50100341	50100341	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	50100341	50100341	G	T	SNP	DNAAF2	ENST00000298292	human	ensembl	74_37	-1	known	silent	c.1527	p.A509	0.318	NULL	pfam_PIH	-	no_errors	DNAAF2	HGNC	ENSG00000165506				54	0	0	37	29	43.9394
NIN	0	genome.wustl.edu	37	14	51224327	51224327	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	51224327	51224327	G	A	SNP	NIN	ENST00000245441	human	ensembl	74_37	-1	known	missense	c.3421	p.R1141W	0.000	NULL	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503				201	1	0.49505	109	46	29.6774
GCH1	0	genome.wustl.edu	37	14	55369080	55369080	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	55369080	55369080	G	A	SNP	GCH1	ENST00000395514	human	ensembl	74_37	-1	known	missense	c.302	p.A101V	1.000	tigrfam_GTP_CycHdrlase_I	pfam_GTP_CycHdrlase_I_dom,tigrfam_GTP_CycHdrlase_I	-	no_errors	GCH1	HGNC	ENSG00000131979				51	0	0	30	4	11.7647
WDHD1	0	genome.wustl.edu	37	14	55462349	55462349	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	55462349	55462349	G	A	SNP	WDHD1	ENST00000360586	human	ensembl	74_37	-1	known	silent	c.1125	p.H375	0.135	NULL	pfam_WD40_repeat,pfam_DUF3639,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,superfamily_HMG_box_dom,smart_WD40_repeat,smart_HMG_box_dom,pfscan_HMG_box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDHD1	HGNC	ENSG00000198554				40	0	0	23	5	17.8571
TBPL2	0	genome.wustl.edu	37	14	55903630	55903630	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	55903630	55903630	T	C	SNP	TBPL2	ENST00000247219	human	ensembl	74_37	-1	known	missense	c.257	p.E86G	0.005	NULL	pfam_TBP,prints_TBP	-	no_errors	TBPL2	HGNC	ENSG00000182521				90	0	0	43	35	44.8718
PPP1R36	0	genome.wustl.edu	37	14	65019530	65019530	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	65019530	65019530	A	G	SNP	PPP1R36	ENST00000298705	human	ensembl	74_37	+1	known	splice_site	c.135-2	e3-2	0.002	-	-	-	no_errors	PPP1R36	HGNC	ENSG00000165807				53	0	0	19	11	36.6667
PLEKHG3	0	genome.wustl.edu	37	14	65210188	65210188	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	65210188	65210188	C	T	SNP	PLEKHG3	ENST00000394691	human	ensembl	74_37	+1	known	missense	c.3427	p.R1143W	0.681	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG3	HGNC	ENSG00000126822				89	0	0	56	20	26.3158
FNTB	0	genome.wustl.edu	37	14	65494205	65494205	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	65494205	65494205	G	T	SNP	FNTB	ENST00000447296	human	ensembl	74_37	+1	known	nonsense	c.511	p.E171*	0.986	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_Prenyltrans,pfam_Transcrpt_activator_Churchill,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	FNTB	HGNC	ENSG00000257365				192	0	0	68	57	45.6
FNTB	0	genome.wustl.edu	37	14	65507587	65507587	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	65507587	65507587	G	A	SNP	FNTB	ENST00000447296	human	ensembl	74_37	+1	known	missense	c.874	p.A292T	1.000	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_Prenyltrans,pfam_Transcrpt_activator_Churchill,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	FNTB	HGNC	ENSG00000257365				100	1	0.990099	67	4	5.6338
PLEKHH1	0	genome.wustl.edu	37	14	68023986	68023986	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	68023986	68023986	G	T	SNP	PLEKHH1	ENST00000329153	human	ensembl	74_37	+1	known	missense	c.190	p.V64L	1.000	NULL	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH1	HGNC	ENSG00000054690				28	0	0	21	8	27.5862
C14orf169	0	genome.wustl.edu	37	14	73959333	73959333	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	73959333	73959333	G	A	SNP	C14orf169	ENST00000531973	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.974	-	-	-	no_errors	C14orf169	HGNC	ENSG00000255242				68	0	0	52	6	10.3448
ELMSAN1	0	genome.wustl.edu	37	14	74203799	74203799	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	74203799	74203799	C	T	SNP	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	missense	c.1651	p.G551R	0.715	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030				92	0	0	42	39	48.1481
YLPM1	0	genome.wustl.edu	37	14	75265970	75265970	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	75265970	75265970	C	T	SNP	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	missense	c.3970	p.R1324C	0.979	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596				63	0	0	84	5	5.61798
YLPM1	0	genome.wustl.edu	37	14	75301989	75301989	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	75301989	75301989	G	A	SNP	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	missense	c.6316	p.E2106K	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596				67	0	0	65	13	16.6667
PROX2	0	genome.wustl.edu	37	14	75329843	75329843	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	75329843	75329843	C	A	SNP	PROX2	ENST00000445876	human	ensembl	74_37	-1	known	missense	c.695	p.R232M	0.020	NULL	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	-	no_errors	PROX2	HGNC	ENSG00000119608				84	0	0	65	13	16.6667
PGF	0	genome.wustl.edu	37	14	75413539	75413539	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	75413539	75413539	A	G	SNP	PGF	ENST00000405431	human	ensembl	74_37	-1	known	missense	c.505	p.C169R	0.000	NULL	pfam_PDGF/VEGF_dom,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PGF	HGNC	ENSG00000119630				13	0	0	7	6	46.1538
KIAA1737	0	genome.wustl.edu	37	14	77580621	77580621	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	77580621	77580621	G	A	SNP	KIAA1737	ENST00000361786	human	ensembl	74_37	+1	known	missense	c.1160	p.G387D	0.889	NULL	NULL	-	no_errors	KIAA1737	HGNC	ENSG00000198894				109	0	0	90	5	5.26316
SNW1	0	genome.wustl.edu	37	14	78203418	78203418	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	78203418	78203418	T	C	SNP	SNW1	ENST00000261531	human	ensembl	74_37	-1	known	silent	c.534	p.R178	0.919	pfam_SKI-int_prot_SKIP_SNW-dom	pfam_SKI-int_prot_SKIP_SNW-dom,superfamily_Signal_recog_particl_SRP54_hlx	-	no_errors	SNW1	HGNC	ENSG00000100603				112	0	0	43	7	14
NRXN3	0	genome.wustl.edu	37	14	79433613	79433613	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	79433613	79433613	G	A	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.2807	p.R936H	0.993	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				59	0	0	36	21	36.8421
KCNK10	0	genome.wustl.edu	37	14	88652118	88652118	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	88652118	88652118	C	T	SNP	KCNK10	ENST00000312350	human	ensembl	74_37	-1	known	missense	c.1393	p.D465N	1.000	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl_TREK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TRAAK,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK10	HGNC	ENSG00000100433				177	0	0	94	31	24.8
TTC8	0	genome.wustl.edu	37	14	89307467	89307467	+	Nonsense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	89307467	89307467	T	G	SNP	TTC8	ENST00000556077	human	ensembl	74_37	+1	known	nonsense	c.540	p.Y180*	1.000	NULL	NULL	-	no_errors	TTC8	HGNC	ENSG00000165533				89	0	0	44	24	35.2941
RPS6KA5	0	genome.wustl.edu	37	14	91369214	91369214	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	91369214	91369214	T	C	SNP	RPS6KA5	ENST00000261991	human	ensembl	74_37	-1	known	missense	c.1057	p.T353A	1.000	pfam_Pkinase_C,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Aminoglycoside_PTrfase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_AGC-kinase_C,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA5	HGNC	ENSG00000100784				76	0	0	28	22	44
SERPINA11	0	genome.wustl.edu	37	14	94914898	94914898	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	94914898	94914898	T	C	SNP	SERPINA11	ENST00000334708	human	ensembl	74_37	-1	known	missense	c.214	p.N72D	0.999	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA11	HGNC	ENSG00000186910				243	0	0	218	13	5.62771
DICER1	0	genome.wustl.edu	37	14	95574665	95574665	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	95574665	95574665	G	T	SNP	DICER1	ENST00000343455	human	ensembl	74_37	-1	known	missense	c.2432	p.P811H	1.000	NULL	pfam_RNase_III_dom,pfam_PAZ_dom,pfam_Dicer_dimerisation_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,superfamily_RNase_III_dom,superfamily_P-loop_NTPase,superfamily_PAZ_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_PAZ_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_PAZ_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DICER1	HGNC	ENSG00000100697				160	0	0	51	29	36.25
BCL11B	0	genome.wustl.edu	37	14	99697710	99697710	+	Silent	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	99697710	99697710	A	C	SNP	BCL11B	ENST00000357195	human	ensembl	74_37	-1	known	silent	c.612	p.A204	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11B	HGNC	ENSG00000127152				43	0	0	31	8	20.5128
TM2D3	0	genome.wustl.edu	37	15	102182721	102182721	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	102182721	102182721	A	G	SNP	TM2D3	ENST00000333202	human	ensembl	74_37	-1	known	silent	c.705	p.V235	0.369	NULL	pfam_TM2	-	no_errors	TM2D3	HGNC	ENSG00000184277				133	0	0	80	41	33.8843
OR4M2	0	genome.wustl.edu	37	15	22369163	22369163	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	22369163	22369163	G	T	SNP	OR4M2	ENST00000332663	human	ensembl	74_37	+1	putative	missense	c.588	p.E196D	0.686	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4M2	HGNC	ENSG00000182974				154	1	0.645161	91	58	38.9262
WHAMMP3	0	genome.wustl.edu	37	15	23205193	23205193	+	RNA	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	23205193	23205193	A	G	SNP	WHAMMP3	ENST00000400153	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WHAMMP3	HGNC	ENSG00000187667				15	0	0	14	3	17.6471
MKRN3	0	genome.wustl.edu	37	15	23810931	23810931	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	23810931	23810931	T	C	SNP	MKRN3	ENST00000314520	human	ensembl	74_37	+1	known	missense	c.2	p.M1T	0.983	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455				18	0	0	10	6	37.5
SNORD115-43	0	genome.wustl.edu	37	15	25494417	25494417	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	25494417	25494417	G	A	SNP	SNORD115-43	ENST00000365503	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.262	-	-	-	no_errors	SNORD115-43	HGNC	ENSG00000202373				373	0	0	192	111	36.6337
HERC2	0	genome.wustl.edu	37	15	28482247	28482247	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	28482247	28482247	T	C	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.3865	p.I1289V	1.000	superfamily_Cyt_B5-like_heme/steroid-bd	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				77	0	0	38	3	7.31707
APBA2	0	genome.wustl.edu	37	15	29406136	29406136	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	29406136	29406136	C	T	SNP	APBA2	ENST00000558259	human	ensembl	74_37	+1	known	missense	c.2095	p.R699C	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA2	HGNC	ENSG00000034053				127	1	0.78125	32	30	48.3871
TJP1	0	genome.wustl.edu	37	15	30018641	30018641	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	30018641	30018641	G	A	SNP	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	missense	c.2354	p.A785V	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067				103	0	0	28	13	31.7073
FAN1	0	genome.wustl.edu	37	15	31214442	31214442	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	31214442	31214442	C	T	SNP	FAN1	ENST00000362065	human	ensembl	74_37	+1	known	missense	c.2057	p.A686V	1.000	NULL	pfam_VRR_NUC,smart_Znf_Rad18_put	-	no_errors	FAN1	HGNC	ENSG00000198690				92	0	0	48	18	27.2727
RYR3	0	genome.wustl.edu	37	15	33941292	33941292	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	33941292	33941292	G	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.3998	p.R1333L	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				165	0	0	102	6	5.55556
RYR3	0	genome.wustl.edu	37	15	34040387	34040387	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	34040387	34040387	A	G	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.8062	p.R2688G	1.000	pfam_Ryanodine_rcpt,superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				72	0	0	41	26	38.806
GOLGA8A	0	genome.wustl.edu	37	15	34678912	34678912	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	34678912	34678912	G	A	SNP	GOLGA8A	ENST00000432566	human	ensembl	74_37	-1	known	missense	c.289	p.R97C	0.998	NULL	NULL	-	no_errors	GOLGA8A	HGNC	ENSG00000175265				14	0	0	3	10	76.9231
C15orf52	0	genome.wustl.edu	37	15	40629609	40629609	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	40629609	40629609	G	A	SNP	C15orf52	ENST00000559313	human	ensembl	74_37	-1	known	missense	c.854	p.A285V	0.009	NULL	NULL	-	no_errors	C15orf52	HGNC	ENSG00000188549				77	0	0	44	26	37.1429
RPAP1	0	genome.wustl.edu	37	15	41814328	41814328	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	41814328	41814328	G	A	SNP	RPAP1	ENST00000304330	human	ensembl	74_37	-1	known	nonsense	c.2863	p.Q955*	1.000	NULL	pfam_RNA_pol_II_AP1_C,pfam_RNA_pol_II_AP1_N,superfamily_ARM-type_fold	-	no_errors	RPAP1	HGNC	ENSG00000103932				162	0	0	104	7	6.30631
SPTBN5	0	genome.wustl.edu	37	15	42167711	42167711	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	42167711	42167711	C	T	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.4232	p.R1411H	0.006	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877				20	0	0	8	7	46.6667
CDAN1	0	genome.wustl.edu	37	15	43028229	43028229	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	43028229	43028229	C	T	SNP	CDAN1	ENST00000356231	human	ensembl	74_37	-1	known	missense	c.617	p.R206Q	1.000	NULL	NULL	-	no_errors	CDAN1	HGNC	ENSG00000140326				73	0	0	44	20	31.25
TGM5	0	genome.wustl.edu	37	15	43552729	43552729	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	43552729	43552729	C	T	SNP	TGM5	ENST00000220420	human	ensembl	74_37	-1	known	missense	c.59	p.R20Q	0.000	pfam_Transglutaminase_N,superfamily_Ig_E-set	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM5	HGNC	ENSG00000104055				194	0	0	79	43	35.2459
TP53BP1	0	genome.wustl.edu	37	15	43714075	43714075	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	43714075	43714075	G	A	SNP	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	nonsense	c.4078	p.R1360*	1.000	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369				56	0	0	37	17	31.4815
TRIM69	0	genome.wustl.edu	37	15	45047120	45047120	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	45047120	45047120	A	G	SNP	TRIM69	ENST00000329464	human	ensembl	74_37	+1	known	missense	c.29	p.N10S	0.001	NULL	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_RING	-	no_errors	TRIM69	HGNC	ENSG00000185880				159	0	0	88	37	29.6
DUOX1	0	genome.wustl.edu	37	15	45444669	45444669	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	45444669	45444669	G	A	SNP	DUOX1	ENST00000321429	human	ensembl	74_37	+1	known	missense	c.3379	p.V1127M	0.995	pfam_Fe3_Rdtase_TM_dom	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX1	HGNC	ENSG00000137857				71	0	0	57	18	24
DTWD1	0	genome.wustl.edu	37	15	49935572	49935572	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	49935572	49935572	C	T	SNP	DTWD1	ENST00000251250	human	ensembl	74_37	+1	known	missense	c.712	p.R238C	1.000	pfam_DTW	pfam_DTW	-	no_errors	DTWD1	HGNC	ENSG00000104047				39	0	0	20	9	31.0345
ATP8B4	0	genome.wustl.edu	37	15	50158588	50158588	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	50158588	50158588	T	C	SNP	ATP8B4	ENST00000284509	human	ensembl	74_37	-1	known	missense	c.3121	p.S1041G	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B4	HGNC	ENSG00000104043				89	0	0	46	26	36.1111
TRPM7	0	genome.wustl.edu	37	15	50901876	50901876	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	50901876	50901876	T	G	SNP	TRPM7	ENST00000313478	human	ensembl	74_37	-1	known	missense	c.2482	p.N828H	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM7	HGNC	ENSG00000092439				47	0	0	22	7	24.1379
MYO5A	0	genome.wustl.edu	37	15	52609257	52609257	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	52609257	52609257	T	C	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	silent	c.5397	p.L1799	0.992	pfam_Dil_domain,superfamily_Skp1_comp_dimer,pfscan_Dilute	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535				106	0	0	74	4	5.12821
MYO5A	0	genome.wustl.edu	37	15	52699556	52699556	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	52699556	52699556	A	G	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	silent	c.879	p.S293	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535				97	0	0	34	16	32
FOXB1	0	genome.wustl.edu	37	15	60297413	60297413	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	60297413	60297413	G	A	SNP	FOXB1	ENST00000396057	human	ensembl	74_37	+1	known	missense	c.251	p.G84D	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXB1	HGNC	ENSG00000171956				128	0	0	85	16	15.8416
ANXA2	0	genome.wustl.edu	37	15	60639874	60639874	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	60639874	60639874	G	A	SNP	ANXA2	ENST00000332680	human	ensembl	74_37	-1	known	silent	c.1029	p.G343	0.151	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinII,prints_AnnexinV	-	no_errors	ANXA2	HGNC	ENSG00000182718				57	0	0	33	5	13.1579
VPS13C	0	genome.wustl.edu	37	15	62261496	62261496	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	62261496	62261496	A	G	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	splice_site	c.2911+2	e28+2	1.000	-	-	-	no_errors	VPS13C	HGNC	ENSG00000129003				32	0	0	14	5	26.3158
VPS13C	0	genome.wustl.edu	37	15	62264932	62264932	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	62264932	62264932	A	G	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	silent	c.2649	p.D883	0.966	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003				74	0	0	65	4	5.7971
TLN2	0	genome.wustl.edu	37	15	62939540	62939540	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	62939540	62939540	C	T	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	missense	c.31	p.R11C	1.000	NULL	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914				121	0	0	96	11	10.2804
TLN2	0	genome.wustl.edu	37	15	63031561	63031561	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	63031561	63031561	G	A	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	silent	c.3702	p.T1234	0.620	superfamily_Vinculin/catenin	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914				66	0	0	47	18	27.6923
HERC1	0	genome.wustl.edu	37	15	63904727	63904727	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	63904727	63904727	C	T	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	nonsense	c.14123	p.W4708*	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657				81	0	0	50	21	29.5775
ZNF609	0	genome.wustl.edu	37	15	64791864	64791864	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	64791864	64791864	A	G	SNP	ZNF609	ENST00000326648	human	ensembl	74_37	+1	known	silent	c.246	p.Q82	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357				136	0	0	116	38	24.6753
ANKDD1A	0	genome.wustl.edu	37	15	65242166	65242166	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	65242166	65242166	G	A	SNP	ANKDD1A	ENST00000380230	human	ensembl	74_37	+1	known	missense	c.1456	p.V486M	0.967	pfam_Death_domain,superfamily_DEATH-like_dom,pfscan_Death_domain	pfam_Ankyrin_rpt,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,prints_Ankyrin_rpt	-	no_errors	ANKDD1A	HGNC	ENSG00000166839				170	0	0	130	9	6.47482
SNAPC5	0	genome.wustl.edu	37	15	66789957	66789957	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	66789957	66789957	G	A	SNP	SNAPC5	ENST00000565465	human	ensembl	74_37	-1	known	missense	c.113	p.A38V	0.000	NULL	NULL	-	no_errors	SNAPC5	HGNC	ENSG00000174446				84	0	0	70	21	23.0769
IQCH	0	genome.wustl.edu	37	15	67553631	67553631	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	67553631	67553631	T	G	SNP	IQCH	ENST00000335894	human	ensembl	74_37	+1	known	missense	c.73	p.L25V	0.899	NULL	superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCH	HGNC	ENSG00000103599				83	0	0	41	4	8.88889
LARP6	0	genome.wustl.edu	37	15	71124946	71124946	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	71124946	71124946	G	A	SNP	LARP6	ENST00000299213	human	ensembl	74_37	-1	known	silent	c.921	p.D307	0.060	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd,prints_Lupus_La	-	no_errors	LARP6	HGNC	ENSG00000166173				189	0	0	132	12	8.33333
LRRC49	0	genome.wustl.edu	37	15	71256165	71256165	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	71256165	71256165	C	T	SNP	LRRC49	ENST00000260382	human	ensembl	74_37	+1	known	missense	c.815	p.S272L	0.976	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC49	HGNC	ENSG00000137821				234	0	0	145	11	7.05128
THSD4	0	genome.wustl.edu	37	15	72057442	72057442	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	72057442	72057442	C	T	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	silent	c.2673	p.D891	0.472	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720				88	0	0	44	19	30.1587
NEO1	0	genome.wustl.edu	37	15	73470737	73470737	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	73470737	73470737	A	T	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	missense	c.1260	p.Q420H	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141				46	0	0	14	10	41.6667
NEO1	0	genome.wustl.edu	37	15	73570470	73570470	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	73570470	73570470	A	G	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	splice_site	c.3194-2	e22-2	1.000	-	-	-	no_errors	NEO1	HGNC	ENSG00000067141				112	0	0	47	12	20.339
ISLR2	0	genome.wustl.edu	37	15	74425134	74425134	+	Silent	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	74425134	74425134	T	G	SNP	ISLR2	ENST00000361742	human	ensembl	74_37	+1	known	silent	c.39	p.L13	0.146	NULL	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Ig-like_dom	-	no_errors	ISLR2	HGNC	ENSG00000167178				76	0	0	54	38	41.3043
SEMA7A	0	genome.wustl.edu	37	15	74703166	74703166	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	74703166	74703166	G	A	SNP	SEMA7A	ENST00000261918	human	ensembl	74_37	-1	known	silent	c.1800	p.I600	0.996	pfscan_Ig-like_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA7A	HGNC	ENSG00000138623				93	0	0	48	45	48.3871
ULK3	0	genome.wustl.edu	37	15	75131045	75131045	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	75131045	75131045	G	A	SNP	ULK3	ENST00000440863	human	ensembl	74_37	-1	known	silent	c.1041	p.I347	0.996	pfam_MIT,smart_MIT	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIT,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_MIT,pfscan_Prot_kinase_dom	-	no_errors	ULK3	HGNC	ENSG00000140474				23	0	0	6	4	40
NRG4	0	genome.wustl.edu	37	15	76254214	76254214	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	76254214	76254214	G	A	SNP	NRG4	ENST00000394907	human	ensembl	74_37	-1	known	missense	c.206	p.A69V	0.000	NULL	smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	NRG4	HGNC	ENSG00000169752				155	0	0	132	8	5.71429
CRABP1	0	genome.wustl.edu	37	15	78633490	78633490	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	78633490	78633490	T	C	SNP	CRABP1	ENST00000299529	human	ensembl	74_37	+1	known	missense	c.176	p.V59A	1.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	CRABP1	HGNC	ENSG00000166426				27	0	0	13	3	18.75
ADAMTS7	0	genome.wustl.edu	37	15	79063576	79063576	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	79063576	79063576	C	T	SNP	ADAMTS7	ENST00000388820	human	ensembl	74_37	-1	known	missense	c.2446	p.D816N	0.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378				31	0	0	23	14	37.8378
CTSH	0	genome.wustl.edu	37	15	79224792	79224792	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	79224792	79224792	G	A	SNP	CTSH	ENST00000220166	human	ensembl	74_37	-1	known	silent	c.414	p.C138	0.956	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSH	HGNC	ENSG00000103811				62	0	0	17	11	39.2857
RASGRF1	0	genome.wustl.edu	37	15	79341903	79341903	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	79341903	79341903	G	A	SNP	RASGRF1	ENST00000419573	human	ensembl	74_37	-1	known	missense	c.559	p.R187C	0.996	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF1	HGNC	ENSG00000058335				60	0	0	22	17	43.5897
ARNT2	0	genome.wustl.edu	37	15	80762578	80762578	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	80762578	80762578	G	A	SNP	ARNT2	ENST00000303329	human	ensembl	74_37	+1	known	missense	c.214	p.E72K	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom,prints_Nuc_translocat,tigrfam_PAS	-	no_errors	ARNT2	HGNC	ENSG00000172379				31	0	0	18	17	48.5714
FAM154B	0	genome.wustl.edu	37	15	82575092	82575092	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	82575092	82575092	C	T	SNP	FAM154B	ENST00000339465	human	ensembl	74_37	+1	known	missense	c.886	p.R296C	0.797	NULL	NULL	-	no_errors	FAM154B	HGNC	ENSG00000188659				90	0	0	35	25	41.6667
HDGFRP3	0	genome.wustl.edu	37	15	83826184	83826184	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	83826184	83826184	T	C	SNP	HDGFRP3	ENST00000299633	human	ensembl	74_37	-1	known	missense	c.442	p.K148E	1.000	NULL	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	HDGFRP3	Uniprot_gn	ENSG00000166503				44	0	0	25	17	40.4762
ADAMTSL3	0	genome.wustl.edu	37	15	84652067	84652067	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	84652067	84652067	G	T	SNP	ADAMTSL3	ENST00000286744	human	ensembl	74_37	+1	known	missense	c.3687	p.K1229N	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218				165	0	0	71	54	43.2
NTRK3	0	genome.wustl.edu	37	15	88799238	88799238	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	88799238	88799238	G	A	SNP	NTRK3	ENST00000360948	human	ensembl	74_37	-1	known	silent	c.147	p.D49	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Kinase-like_dom,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Tyr_kinase_NGF_rcpt,prints_Tyr_kin_neurotrophic_rcpt_3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NTRK3	HGNC	ENSG00000140538				138	0	0	46	35	43.2099
ACAN	0	genome.wustl.edu	37	15	89417219	89417219	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	89417219	89417219	G	A	SNP	ACAN	ENST00000439576	human	ensembl	74_37	+1	known	missense	c.7480	p.G2494R	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766				52	0	0	44	13	22.807
ANPEP	0	genome.wustl.edu	37	15	90334189	90334189	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	90334189	90334189	A	T	SNP	ANPEP	ENST00000300060	human	ensembl	74_37	-1	known	missense	c.2664	p.F888L	0.350	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ANPEP	HGNC	ENSG00000166825				73	0	0	61	7	10.2941
ENSG00000221309	0	genome.wustl.edu	37	15	90838293	90838293	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	90838293	90838293	C	T	SNP	ENSG00000221309	ENST00000408382	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.046	-	-	-	no_errors	AC091167.1	Clone_based_ensembl_gene	ENSG00000221309				40	0	0	40	17	29.8246
IGF1R	0	genome.wustl.edu	37	15	99251014	99251014	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	99251014	99251014	C	A	SNP	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	silent	c.318	p.I106	1.000	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443				56	0	0	47	13	21.6667
TXNDC11	0	genome.wustl.edu	37	16	11773401	11773401	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	11773401	11773401	G	A	SNP	TXNDC11	ENST00000356957	human	ensembl	74_37	-1	known	missense	c.2608	p.R870W	0.991	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC11	HGNC	ENSG00000153066				73	0	0	35	19	35.1852
SNX29	0	genome.wustl.edu	37	16	12371842	12371842	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	12371842	12371842	G	A	SNP	SNX29	ENST00000306030	human	ensembl	74_37	+1	known	silent	c.576	p.P192	0.565	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX29	HGNC	ENSG00000048471				22	0	0	11	5	31.25
MYH11	0	genome.wustl.edu	37	16	15835670	15835670	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	15835670	15835670	G	A	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	missense	c.2620	p.R874W	0.565	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392				211	0	0	125	70	35.8974
ABCC6	0	genome.wustl.edu	37	16	16263540	16263540	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	16263540	16263540	C	T	SNP	ABCC6	ENST00000205557	human	ensembl	74_37	-1	known	silent	c.2958	p.L986	0.984	superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC6	HGNC	ENSG00000091262				23	0	0	16	8	33.3333
TBL3	0	genome.wustl.edu	37	16	2024271	2024271	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	2024271	2024271	C	T	SNP	TBL3	ENST00000568546	human	ensembl	74_37	+1	known	missense	c.167	p.A56V	0.000	smart_WD40_repeat	pfam_WD40_repeat,pfam_SSU_processome_Utp13,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL3	HGNC	ENSG00000183751				143	0	0	87	26	23.0088
ZNF598	0	genome.wustl.edu	37	16	2050088	2050088	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	2050088	2050088	C	T	SNP	ZNF598	ENST00000431526	human	ensembl	74_37	-1	known	missense	c.1462	p.A488T	1.000	NULL	superfamily_PAH,smart_Znf_C2H2-like,pfscan_Znf_RING	-	no_errors	ZNF598	HGNC	ENSG00000167962				32	0	0	28	5	15.1515
ZNF598	0	genome.wustl.edu	37	16	2052542	2052542	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	2052542	2052542	G	A	SNP	ZNF598	ENST00000431526	human	ensembl	74_37	-1	known	silent	c.657	p.D219	0.926	smart_Znf_C2H2-like	superfamily_PAH,smart_Znf_C2H2-like,pfscan_Znf_RING	-	no_errors	ZNF598	HGNC	ENSG00000167962				102	0	0	41	37	47.4359
DNAH3	0	genome.wustl.edu	37	16	20976396	20976396	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	20976396	20976396	T	C	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	missense	c.8810	p.Q2937R	0.802	superfamily_Prefoldin	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486				265	0	0	214	18	7.75862
TSC2	0	genome.wustl.edu	37	16	2110688	2110688	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	2110688	2110688	C	T	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	silent	c.993	p.N331	0.827	pfam_Tuberin_N,superfamily_ARM-type_fold	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197				171	0	0	108	37	25.5172
PKD1	0	genome.wustl.edu	37	16	2139858	2139858	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	2139858	2139858	C	T	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.12782	p.G4261D	0.118	NULL	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710				23	0	0	18	3	14.2857
PKD1	0	genome.wustl.edu	37	16	2161747	2161747	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	2161747	2161747	C	T	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.3421	p.G1141S	0.912	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom,tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710				11	0	0	16	6	27.2727
POLR3E	0	genome.wustl.edu	37	16	22328529	22328529	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	22328529	22328529	T	C	SNP	POLR3E	ENST00000299853	human	ensembl	74_37	+1	known	splice_site	c.865+2	e11+2	0.997	-	-	-	no_errors	POLR3E	HGNC	ENSG00000058600				87	0	0	37	30	44.7761
POLR3E	0	genome.wustl.edu	37	16	22335726	22335726	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	22335726	22335726	G	A	SNP	POLR3E	ENST00000299853	human	ensembl	74_37	+1	known	missense	c.1120	p.V374M	0.989	pfam_RNA_pol_III_Rpc5	pfam_RNA_pol_III_Rpc5	-	no_errors	POLR3E	HGNC	ENSG00000058600				93	0	0	59	44	42.7184
CASKIN1	0	genome.wustl.edu	37	16	2239534	2239534	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	2239534	2239534	C	A	SNP	CASKIN1	ENST00000343516	human	ensembl	74_37	-1	known	missense	c.276	p.Q92H	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_SH3_domain,prints_Ankyrin_rpt	-	no_errors	CASKIN1	HGNC	ENSG00000167971				46	0	0	22	17	43.5897
HS3ST2	0	genome.wustl.edu	37	16	22926383	22926383	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	22926383	22926383	G	A	SNP	HS3ST2	ENST00000261374	human	ensembl	74_37	+1	known	missense	c.604	p.V202M	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST2	HGNC	ENSG00000122254				198	0	0	136	43	24.0223
ATP6V0C	0	genome.wustl.edu	37	16	2569560	2569560	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	2569560	2569560	C	T	SNP	ATP6V0C	ENST00000330398	human	ensembl	74_37	+1	known	silent	c.282	p.G94	0.004	pfam_ATPase_proteolipid_c_like_dom,superfamily_ATPase_proteolipid_c_like_dom,tigrfam_ATPase_proteolipid_su_C_euk	pfam_ATPase_proteolipid_c_like_dom,superfamily_ATPase_proteolipid_c_like_dom,prints_ATPase_proteolipid_csu,tigrfam_ATPase_proteolipid_su_C_euk	-	no_errors	ATP6V0C	HGNC	ENSG00000185883				38	0	0	18	4	18.1818
GTF3C1	0	genome.wustl.edu	37	16	27475894	27475894	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	27475894	27475894	G	A	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	silent	c.5619	p.T1873	0.000	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235				139	0	0	106	7	6.19469
GTF3C1	0	genome.wustl.edu	37	16	27500445	27500445	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	27500445	27500445	G	A	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	silent	c.3348	p.A1116	0.900	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235				141	0	0	78	53	40.458
KIAA0556	0	genome.wustl.edu	37	16	27629746	27629746	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	27629746	27629746	G	T	SNP	KIAA0556	ENST00000261588	human	ensembl	74_37	+1	known	missense	c.64	p.G22C	1.000	NULL	superfamily_Thaumatin	-	no_errors	KIAA0556	HGNC	ENSG00000047578				77	0	0	46	5	9.80392
APOBR	0	genome.wustl.edu	37	16	28507727	28507727	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	28507727	28507727	A	G	SNP	APOBR	ENST00000564831	human	ensembl	74_37	+1	known	silent	c.1365	p.A455	0.001	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730				58	0	0	57	4	6.55738
SULT1A1	0	genome.wustl.edu	37	16	28620148	28620148	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	28620148	28620148	G	A	SNP	SULT1A1	ENST00000314752	human	ensembl	74_37	-1	known	missense	c.29	p.P10L	0.002	superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT1A1	HGNC	ENSG00000196502				155	1	0.641026	112	14	11.1111
ATXN2L	0	genome.wustl.edu	37	16	28846700	28846700	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	28846700	28846700	G	A	SNP	ATXN2L	ENST00000395547	human	ensembl	74_37	+1	known	missense	c.2665	p.A889T	1.000	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2L	HGNC	ENSG00000168488				60	0	0	55	9	14.0625
RRN3P2	0	genome.wustl.edu	37	16	29110458	29110458	+	RNA	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	29110458	29110458	T	C	SNP	RRN3P2	ENST00000427965	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	RRN3P2	HGNC	ENSG00000103472				77	0	0	25	5	16.6667
GDPD3	0	genome.wustl.edu	37	16	30124700	30124700	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	30124700	30124700	C	T	SNP	GDPD3	ENST00000406256	human	ensembl	74_37	-1	known	missense	c.100	p.A34T	0.000	NULL	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD3	HGNC	ENSG00000102886				345	0	0	256	14	5.18519
KREMEN2	0	genome.wustl.edu	37	16	3014884	3014884	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	3014884	3014884	A	G	SNP	KREMEN2	ENST00000303746	human	ensembl	74_37	+1	known	missense	c.119	p.N40S	1.000	pirsf_Kremen,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Kremen,pfam_WSC_carb-bd,pfam_Kringle,pfam_CUB_dom,superfamily_Kringle-like,superfamily_CUB_dom,smart_Kringle,smart_WSC_carb-bd_subgr,smart_CUB_dom,pfscan_CUB_dom,pfscan_Kringle,pfscan_WSC_carb-bd	-	no_errors	KREMEN2	HGNC	ENSG00000131650				35	0	0	27	12	30.7692
PAQR4	0	genome.wustl.edu	37	16	3021678	3021678	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	3021678	3021678	G	A	SNP	PAQR4	ENST00000318782	human	ensembl	74_37	+1	known	missense	c.551	p.R184H	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR4	HGNC	ENSG00000162073				72	0	0	41	16	28.0702
CLDN6	0	genome.wustl.edu	37	16	3065512	3065512	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	3065512	3065512	A	G	SNP	CLDN6	ENST00000328796	human	ensembl	74_37	-1	known	missense	c.511	p.S171P	0.021	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin6	-	no_errors	CLDN6	HGNC	ENSG00000184697				45	0	0	27	9	25
HSD3B7	0	genome.wustl.edu	37	16	30997840	30997840	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	30997840	30997840	A	G	SNP	HSD3B7	ENST00000297679	human	ensembl	74_37	+1	known	missense	c.419	p.H140R	1.000	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_Male_sterile_NAD-bd,pfam_dTDP_dehydrorham_reduct	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_Male_sterile_NAD-bd,pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Polysac_CapD-like,pfam_dTDP_dehydrorham_reduct,pfam_NmrA	-	no_errors	HSD3B7	HGNC	ENSG00000099377				71	0	0	59	11	15.7143
MMP25	0	genome.wustl.edu	37	16	3100442	3100442	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	3100442	3100442	G	A	SNP	MMP25	ENST00000336577	human	ensembl	74_37	+1	known	missense	c.556	p.D186N	1.000	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,prints_Pept_M10A	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP25	HGNC	ENSG00000008516				78	0	0	44	22	33.3333
FUS	0	genome.wustl.edu	37	16	31196405	31196405	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	31196405	31196405	C	T	SNP	FUS	ENST00000254108	human	ensembl	74_37	+1	known	silent	c.669	p.G223	0.710	NULL	pfam_Znf_RanBP2,pfam_RRM_dom,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	FUS	HGNC	ENSG00000089280				16	0	0	18	12	40
TRIM72	0	genome.wustl.edu	37	16	31236013	31236013	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	31236013	31236013	G	A	SNP	TRIM72	ENST00000322122	human	ensembl	74_37	+1	known	nonsense	c.1371	p.W457*	1.000	superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM72	HGNC	ENSG00000177238				8	0	0	4	8	66.6667
ITGAD	0	genome.wustl.edu	37	16	31422077	31422077	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	31422077	31422077	C	A	SNP	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	missense	c.1234	p.L412M	0.002	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886				96	0	0	41	32	43.8356
ARMC5	0	genome.wustl.edu	37	16	31476459	31476459	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	31476459	31476459	G	A	SNP	ARMC5	ENST00000457010	human	ensembl	74_37	+1	known	silent	c.2115	p.A705	0.000	NULL	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC5	HGNC	ENSG00000140691				94	0	0	86	5	5.49451
ENSG00000261727	0	genome.wustl.edu	37	16	32095637	32095637	+	RNA	SNP	G	G	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	32095637	32095637	G	C	SNP	ENSG00000261727	ENST00000566806	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-1166P10.6	Clone_based_vega_gene	ENSG00000261727				29	0	0	41	10	19.6078
HERC2P4	0	genome.wustl.edu	37	16	32182218	32182218	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	32182218	32182218	C	T	SNP	HERC2P4	ENST00000564730	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P4	HGNC	ENSG00000230267				79	0	0	50	23	31.5068
ZNF263	0	genome.wustl.edu	37	16	3339723	3339723	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	3339723	3339723	G	A	SNP	ZNF263	ENST00000219069	human	ensembl	74_37	+1	known	missense	c.1217	p.C406Y	0.937	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF263	HGNC	ENSG00000006194				159	0	0	114	8	6.55738
NLRC3	0	genome.wustl.edu	37	16	3604310	3604310	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	3604310	3604310	C	T	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.2341	p.V781I	0.020	smart_Leu-rich_rpt_RNase_inh_sub-typ	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984				41	0	0	17	17	50
SLX4	0	genome.wustl.edu	37	16	3640169	3640169	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	3640169	3640169	G	A	SNP	SLX4	ENST00000294008	human	ensembl	74_37	-1	known	missense	c.3470	p.S1157L	0.998	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	SLX4	HGNC	ENSG00000188827				113	0	0	66	39	37.1429
TRAP1	0	genome.wustl.edu	37	16	3725375	3725375	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	3725375	3725375	A	G	SNP	TRAP1	ENST00000246957	human	ensembl	74_37	-1	known	missense	c.838	p.F280L	1.000	superfamily_HATPase_ATP-bd,pirsf_Hsp90_fam,prints_Hsp90_N	pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pirsf_Hsp90_fam,prints_Hsp90_N	-	no_errors	TRAP1	HGNC	ENSG00000126602				74	0	0	52	4	7.14286
DNAJA3	0	genome.wustl.edu	37	16	4504853	4504853	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	4504853	4504853	C	T	SNP	DNAJA3	ENST00000262375	human	ensembl	74_37	+1	known	missense	c.1381	p.R461C	0.993	NULL	pfam_DnaJ_domain,pfam_DnaJ_C,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA3	HGNC	ENSG00000103423				79	0	0	12	9	42.8571
SIAH1	0	genome.wustl.edu	37	16	48396331	48396331	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	48396331	48396331	A	G	SNP	SIAH1	ENST00000356721	human	ensembl	74_37	-1	known	silent	c.102	p.R34	0.994	NULL	pfam_7-in-absentia-prot_TRAF-dom,superfamily_TRAF-like,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	SIAH1	HGNC	ENSG00000196470				64	0	0	39	11	22
PPL	0	genome.wustl.edu	37	16	4934378	4934378	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	4934378	4934378	C	T	SNP	PPL	ENST00000345988	human	ensembl	74_37	-1	known	silent	c.4278	p.R1426	1.000	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898				134	0	0	106	56	34.5679
PPL	0	genome.wustl.edu	37	16	4935262	4935262	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	4935262	4935262	C	T	SNP	PPL	ENST00000345988	human	ensembl	74_37	-1	known	missense	c.3394	p.D1132N	0.011	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898				90	0	0	65	4	5.7971
ALG1	0	genome.wustl.edu	37	16	5125455	5125455	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	5125455	5125455	G	A	SNP	ALG1	ENST00000262374	human	ensembl	74_37	+1	known	missense	c.457	p.V153I	0.694	NULL	pfam_Glyco_trans_1	-	no_errors	ALG1	HGNC	ENSG00000033011				139	0	0	71	40	36.036
LPCAT2	0	genome.wustl.edu	37	16	55613034	55613034	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	55613034	55613034	A	G	SNP	LPCAT2	ENST00000262134	human	ensembl	74_37	+1	known	missense	c.1328	p.D443G	1.000	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	LPCAT2	HGNC	ENSG00000087253				143	0	0	93	8	7.92079
SLC6A2	0	genome.wustl.edu	37	16	55690802	55690802	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	55690802	55690802	C	A	SNP	SLC6A2	ENST00000219833	human	ensembl	74_37	+1	known	missense	c.196	p.L66M	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_noradrenaline	-	no_errors	SLC6A2	HGNC	ENSG00000103546				127	0	0	91	54	37.2414
BBS2	0	genome.wustl.edu	37	16	56553706	56553706	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	56553706	56553706	G	T	SNP	BBS2	ENST00000245157	human	ensembl	74_37	-1	known	silent	c.69	p.R23	0.996	superfamily_WD40_repeat_dom,pirsf_Bardet-Biedl_syndrome_2_prot	superfamily_WD40_repeat_dom,pirsf_Bardet-Biedl_syndrome_2_prot	-	no_errors	BBS2	HGNC	ENSG00000125124				50	0	0	30	8	21.0526
MT1B	0	genome.wustl.edu	37	16	56686928	56686928	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	56686928	56686928	A	G	SNP	MT1B	ENST00000334346	human	ensembl	74_37	+1	known	missense	c.137	p.Q46R	1.000	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	-	no_errors	MT1B	HGNC	ENSG00000169688				193	0	0	77	60	43.7956
KIFC3	0	genome.wustl.edu	37	16	57800794	57800794	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	57800794	57800794	C	A	SNP	KIFC3	ENST00000379655	human	ensembl	74_37	-1	known	missense	c.1322	p.R441L	1.000	superfamily_P-loop_NTPase	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIFC3	HGNC	ENSG00000140859				72	0	0	34	21	38.1818
PRSS54	0	genome.wustl.edu	37	16	58314246	58314246	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	58314246	58314246	T	C	SNP	PRSS54	ENST00000219301	human	ensembl	74_37	-1	known	missense	c.1070	p.D357G	1.000	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	-	no_errors	PRSS54	HGNC	ENSG00000103023				93	0	0	68	7	9.33333
C16orf70	0	genome.wustl.edu	37	16	67179283	67179283	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	67179283	67179283	C	T	SNP	C16orf70	ENST00000219139	human	ensembl	74_37	+1	known	silent	c.1011	p.N337	0.996	pfam_UPF0183	pfam_UPF0183	-	no_errors	C16orf70	HGNC	ENSG00000125149				33	0	0	10	16	61.5385
HSF4	0	genome.wustl.edu	37	16	67199736	67199736	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	67199736	67199736	G	A	SNP	HSF4	ENST00000264009	human	ensembl	74_37	+1	known	missense	c.347	p.R116H	1.000	pfam_HSF_DNA-bd,smart_HSF_DNA-bd	pfam_HSF_DNA-bd,smart_HSF_DNA-bd,prints_HSF_DNA-bd	-	no_errors	HSF4	HGNC	ENSG00000102878				43	0	0	32	17	34.6939
ELMO3	0	genome.wustl.edu	37	16	67233097	67233097	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	67233097	67233097	C	T	SNP	ELMO3	ENST00000393997	human	ensembl	74_37	+1	known	silent	c.27	p.R9	0.002	NULL	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO3	HGNC	ENSG00000102890				28	0	0	17	13	43.3333
SLC9A5	0	genome.wustl.edu	37	16	67290433	67290433	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	67290433	67290433	C	T	SNP	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	missense	c.973	p.R325C	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740				54	0	0	31	24	43.6364
WFIKKN1	0	genome.wustl.edu	37	16	682653	682653	+	Silent	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	682653	682653	C	G	SNP	WFIKKN1	ENST00000319070	human	ensembl	74_37	+1	known	silent	c.243	p.P81	0.005	NULL	pfam_Prot_inh_Kunz-m,pfam_Ig_I-set,pfam_Ig_V-set,pfam_WAP-type_4-diS_core,pfam_Kazal_dom,pfam_Immunoglobulin,pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,superfamily_Prot_inh_Kunz-m,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Ig_sub,smart_Ig_sub2,smart_Prot_inh_Kunz-m,pfscan_Netrin_domain,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Prot_inh_Kunz-m	-	no_errors	WFIKKN1	HGNC	ENSG00000127578				19	0	0	10	10	50
NFAT5	0	genome.wustl.edu	37	16	69726329	69726329	+	Silent	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	69726329	69726329	A	C	SNP	NFAT5	ENST00000432919	human	ensembl	74_37	+1	known	silent	c.2601	p.T867	0.979	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFAT5	HGNC	ENSG00000102908				152	0	0	53	33	38.3721
SF3B3	0	genome.wustl.edu	37	16	70563046	70563046	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	70563046	70563046	G	A	SNP	SF3B3	ENST00000302516	human	ensembl	74_37	+1	known	missense	c.341	p.R114H	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C,superfamily_WD40_repeat_dom	-	no_errors	SF3B3	HGNC	ENSG00000189091				108	0	0	56	12	17.6471
SF3B3	0	genome.wustl.edu	37	16	70599269	70599269	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	70599269	70599269	A	G	SNP	SF3B3	ENST00000302516	human	ensembl	74_37	+1	known	splice_site	c.2670-2	e19-2	1.000	-	-	-	no_errors	SF3B3	HGNC	ENSG00000189091				152	0	0	121	28	18.7919
HYDIN	0	genome.wustl.edu	37	16	71019097	71019097	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	71019097	71019097	C	T	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	silent	c.4323	p.L1441	0.998	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423				38	0	0	15	10	40
RHBDL1	0	genome.wustl.edu	37	16	727109	727109	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	727109	727109	A	G	SNP	RHBDL1	ENST00000219551	human	ensembl	74_37	+1	known	missense	c.760	p.M254V	1.000	pfam_Peptidase_S54_rhomboid_dom,pirsf_Peptidase_S54_rhomboid_met	pfam_Peptidase_S54_rhomboid_dom,pirsf_Peptidase_S54_rhomboid_met	-	no_errors	RHBDL1	HGNC	ENSG00000103269				67	0	0	46	5	9.80392
CHST6	0	genome.wustl.edu	37	16	75512546	75512546	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	75512546	75512546	C	T	SNP	CHST6	ENST00000332272	human	ensembl	74_37	-1	known	missense	c.1181	p.R394Q	0.000	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST6	HGNC	ENSG00000183196				108	0	0	53	33	38.3721
RBFOX1	0	genome.wustl.edu	37	16	7568246	7568246	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	7568246	7568246	C	T	SNP	RBFOX1	ENST00000547372	human	ensembl	74_37	+1	known	missense	c.254	p.T85M	1.000	pirsf_RNA-bd_Fox-1	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC	ENSG00000078328				227	1	0.438596	195	11	5.33981
CDYL2	0	genome.wustl.edu	37	16	80654800	80654800	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	80654800	80654800	G	A	SNP	CDYL2	ENST00000570137	human	ensembl	74_37	-1	known	silent	c.867	p.N289	0.815	pfam_Crotonase_core_superfam	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL2	HGNC	ENSG00000166446				25	0	0	20	6	23.0769
CDH13	0	genome.wustl.edu	37	16	83711897	83711897	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	83711897	83711897	G	A	SNP	CDH13	ENST00000566620	human	ensembl	74_37	+1	known	missense	c.1369	p.G457S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH13	HGNC	ENSG00000140945				92	0	0	57	19	25
TAF1C	0	genome.wustl.edu	37	16	84213641	84213641	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	84213641	84213641	G	T	SNP	TAF1C	ENST00000378541	human	ensembl	74_37	-1	known	missense	c.1610	p.P537H	0.713	NULL	superfamily_WD40_repeat_dom	-	no_errors	TAF1C	HGNC	ENSG00000103168				49	0	0	22	12	35.2941
KLHL36	0	genome.wustl.edu	37	16	84690728	84690728	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	84690728	84690728	C	T	SNP	KLHL36	ENST00000564996	human	ensembl	74_37	+1	known	silent	c.315	p.Y105	0.043	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL36	HGNC	ENSG00000135686				83	0	0	46	31	40.2597
IRF8	0	genome.wustl.edu	37	16	85953745	85953745	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	85953745	85953745	G	A	SNP	IRF8	ENST00000268638	human	ensembl	74_37	+1	known	missense	c.1019	p.R340Q	0.998	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF8	HGNC	ENSG00000140968				52	0	0	33	55	62.5
JPH3	0	genome.wustl.edu	37	16	87678349	87678349	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	87678349	87678349	G	T	SNP	JPH3	ENST00000284262	human	ensembl	74_37	+1	known	missense	c.868	p.G290C	1.000	pirsf_Junctophilin,pfam_MORN,smart_MORN	pirsf_Junctophilin,pfam_MORN,smart_MORN	-	no_errors	JPH3	HGNC	ENSG00000154118				89	0	0	89	6	6.31579
SNAI3	0	genome.wustl.edu	37	16	88744962	88744962	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	88744962	88744962	G	A	SNP	SNAI3	ENST00000332281	human	ensembl	74_37	-1	known	missense	c.773	p.T258M	0.999	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI3	HGNC	ENSG00000185669				56	0	0	28	17	37.7778
SPG7	0	genome.wustl.edu	37	16	89598458	89598458	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	89598458	89598458	C	T	SNP	SPG7	ENST00000268704	human	ensembl	74_37	+1	known	silent	c.1134	p.F378	0.995	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	pfam_Peptidase_M41,pfam_ATPase_AAA_core,pfam_Pept_M41_FtsH_extracell,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	-	no_errors	SPG7	HGNC	ENSG00000197912				65	0	0	35	15	30
SPIRE2	0	genome.wustl.edu	37	16	89936599	89936599	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	89936599	89936599	C	T	SNP	SPIRE2	ENST00000378247	human	ensembl	74_37	+1	known	silent	c.2064	p.D688	0.627	superfamily_Znf_FYVE_PHD	superfamily_Znf_FYVE_PHD,smart_KIND	-	no_errors	SPIRE2	HGNC	ENSG00000204991				18	0	0	12	6	33.3333
PRDM7	0	genome.wustl.edu	37	16	90127015	90127015	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	90127015	90127015	G	A	SNP	PRDM7	ENST00000449207	human	ensembl	74_37	-1	known	missense	c.967	p.R323W	0.740	pfscan_SET_dom	pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_SET_dom,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM7	HGNC	ENSG00000126856				98	0	0	51	27	34.6154
GRIN2A	0	genome.wustl.edu	37	16	9857724	9857724	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	9857724	9857724	C	T	SNP	GRIN2A	ENST00000330684	human	ensembl	74_37	-1	known	missense	c.3677	p.G1226D	1.000	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454				224	0	0	141	45	24.1935
GRIN2A	0	genome.wustl.edu	37	16	9862852	9862852	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	9862852	9862852	C	A	SNP	GRIN2A	ENST00000330684	human	ensembl	74_37	-1	known	missense	c.2451	p.M817I	1.000	pfam_Iontro_glu_rcpt,prints_NMDA_rcpt	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454				92	0	0	54	29	34.9398
MYH4	0	genome.wustl.edu	37	17	10361045	10361045	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	10361045	10361045	G	T	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.1589	p.P530H	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424				87	0	0	51	19	27.1429
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				99	0	0	49	31	38.75
SERPINF2	0	genome.wustl.edu	37	17	1657565	1657565	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	1657565	1657565	T	C	SNP	SERPINF2	ENST00000324015	human	ensembl	74_37	+1	known	missense	c.1213	p.S405P	1.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINF2	HGNC	ENSG00000167711				218	1	0.456621	118	9	7.08661
PEMT	0	genome.wustl.edu	37	17	17415878	17415878	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	17415878	17415878	G	A	SNP	PEMT	ENST00000255389	human	ensembl	74_37	-1	known	silent	c.411	p.G137	0.578	pfam_Phopholipid_MeTrfase,pirsf_PEMT/MFAP	pfam_Phopholipid_MeTrfase,pirsf_PEMT/MFAP	-	no_errors	PEMT	HGNC	ENSG00000133027				30	0	0	31	9	22.5
MYO15A	0	genome.wustl.edu	37	17	18058637	18058637	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	18058637	18058637	G	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.8350	p.G2784C	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				73	0	0	55	18	24.6575
LGALS9C	0	genome.wustl.edu	37	17	18389303	18389303	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	18389303	18389303	A	G	SNP	LGALS9C	ENST00000328114	human	ensembl	74_37	+1	known	missense	c.187	p.N63D	1.000	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS9C	HGNC	ENSG00000171916				49	0	0	24	20	45.4545
FBXW10	0	genome.wustl.edu	37	17	18651270	18651270	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	18651270	18651270	C	T	SNP	FBXW10	ENST00000308799	human	ensembl	74_37	+1	known	silent	c.522	p.I174	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW10	HGNC	ENSG00000171931				66	0	0	29	12	29.2683
FBXW10	0	genome.wustl.edu	37	17	18668078	18668078	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	18668078	18668078	T	G	SNP	FBXW10	ENST00000308799	human	ensembl	74_37	+1	known	missense	c.1544	p.V515G	0.799	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW10	HGNC	ENSG00000171931				63	0	0	44	4	8.33333
SLC5A10	0	genome.wustl.edu	37	17	18922781	18922781	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	18922781	18922781	C	T	SNP	SLC5A10	ENST00000395647	human	ensembl	74_37	+1	known	silent	c.1335	p.P445	0.972	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A10	HGNC	ENSG00000154025				34	0	0	14	12	46.1538
KCNJ12	0	genome.wustl.edu	37	17	21318708	21318708	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	21318708	21318708	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	silent	c.54	p.D18	1.000	pfam_K_chnl_inward-rec_Kir_N	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185				93	0	0	68	6	8.10811
KCNJ12	0	genome.wustl.edu	37	17	21319869	21319869	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	21319869	21319869	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	silent	c.1215	p.S405	1.000	pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185				71	0	0	63	8	11.2676
VTN	0	genome.wustl.edu	37	17	26697215	26697215	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	26697215	26697215	G	T	SNP	VTN	ENST00000226218	human	ensembl	74_37	-1	known	missense	c.10	p.L4M	0.000	NULL	pfam_Hemopexin-like_repeat,pfam_Somatomedin_B_dom,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	VTN	HGNC	ENSG00000109072				91	0	0	48	26	35.1351
SUPT6H	0	genome.wustl.edu	37	17	27005857	27005857	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	27005857	27005857	C	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.1225	p.R409C	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				124	0	0	76	21	21.6495
FLOT2	0	genome.wustl.edu	37	17	27211248	27211248	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	27211248	27211248	C	T	SNP	FLOT2	ENST00000394908	human	ensembl	74_37	-1	known	missense	c.217	p.A73T	1.000	pfam_Band_7	pfam_Band_7,smart_Band_7	-	no_errors	FLOT2	HGNC	ENSG00000132589				125	0	0	100	7	6.54206
ANKRD13B	0	genome.wustl.edu	37	17	27939969	27939969	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	27939969	27939969	G	A	SNP	ANKRD13B	ENST00000394859	human	ensembl	74_37	+1	known	missense	c.1640	p.R547H	0.998	NULL	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ubiquitin-int_motif,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif	-	no_errors	ANKRD13B	HGNC	ENSG00000198720				24	0	0	24	10	29.4118
BLMH	0	genome.wustl.edu	37	17	28593903	28593903	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	28593903	28593903	C	A	SNP	BLMH	ENST00000261714	human	ensembl	74_37	-1	known	missense	c.1216	p.G406C	1.000	pfam_Peptidase_C1B,pirsf_Peptidase_C1B	pfam_Peptidase_C1B,pirsf_Peptidase_C1B	-	no_errors	BLMH	HGNC	ENSG00000108578				67	0	0	20	16	44.4444
CPD	0	genome.wustl.edu	37	17	28791794	28791794	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	28791794	28791794	G	T	SNP	CPD	ENST00000225719	human	ensembl	74_37	+1	known	missense	c.4105	p.D1369Y	1.000	NULL	pfam_Peptidase_M14,superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPD	HGNC	ENSG00000108582				145	1	0.684932	55	45	45
TEFM	0	genome.wustl.edu	37	17	29233199	29233199	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	29233199	29233199	G	T	SNP	TEFM	ENST00000581216	human	ensembl	74_37	-1	known	silent	c.18	p.L6	0.064	NULL	superfamily_RNaseH-like_dom	-	no_errors	TEFM	HGNC	ENSG00000172171				121	0	0	80	33	29.2035
RAP1GAP2	0	genome.wustl.edu	37	17	2923872	2923872	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	2923872	2923872	C	T	SNP	RAP1GAP2	ENST00000254695	human	ensembl	74_37	+1	known	silent	c.1734	p.G578	0.887	NULL	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	-	no_errors	RAP1GAP2	HGNC	ENSG00000132359				49	0	0	17	13	43.3333
NF1	0	genome.wustl.edu	37	17	29497003	29497003	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	29497003	29497003	C	T	SNP	NF1	ENST00000358273	human	ensembl	74_37	+1	known	nonsense	c.574	p.R192*	1.000	NULL	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				55	0	0	16	10	38.4615
NF1	0	genome.wustl.edu	37	17	29556375	29556375	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	29556375	29556375	G	A	SNP	NF1	ENST00000358273	human	ensembl	74_37	+1	known	silent	c.2742	p.R914	1.000	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				158	1	0.628931	101	8	7.33945
AP2B1	0	genome.wustl.edu	37	17	33998862	33998862	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	33998862	33998862	G	A	SNP	AP2B1	ENST00000312678	human	ensembl	74_37	+1	known	silent	c.2121	p.L707	1.000	pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,pfam_HEAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Armadillo,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP2B1	HGNC	ENSG00000006125				162	0	0	62	40	39.2157
TAF15	0	genome.wustl.edu	37	17	34173933	34173933	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	34173933	34173933	G	A	SNP	TAF15	ENST00000588240	human	ensembl	74_37	+1	known	missense	c.1763	p.R588H	1.000	NULL	pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	TAF15	HGNC	ENSG00000172660				64	0	0	33	12	26.6667
GSG2	0	genome.wustl.edu	37	17	3627639	3627639	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	3627639	3627639	C	T	SNP	GSG2	ENST00000325418	human	ensembl	74_37	+1	known	missense	c.410	p.P137L	0.015	NULL	pfam_DUF3635,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	GSG2	HGNC	ENSG00000177602				19	0	0	18	10	35.7143
PGAP3	0	genome.wustl.edu	37	17	37830251	37830251	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	37830251	37830251	G	A	SNP	PGAP3	ENST00000300658	human	ensembl	74_37	-1	known	silent	c.552	p.C184	0.997	pfam_Per1	pfam_Per1	-	no_errors	PGAP3	HGNC	ENSG00000161395				62	0	0	33	14	29.7872
IKZF3	0	genome.wustl.edu	37	17	37947731	37947731	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	37947731	37947731	T	C	SNP	IKZF3	ENST00000346872	human	ensembl	74_37	-1	known	missense	c.530	p.H177R	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF3	HGNC	ENSG00000161405				199	0	0	110	13	10.5691
THRA	0	genome.wustl.edu	37	17	38249548	38249548	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	38249548	38249548	C	T	SNP	THRA	ENST00000264637	human	ensembl	74_37	+1	known	silent	c.1386	p.D462	1.000	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_ThyrH_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	THRA	HGNC	ENSG00000126351				72	0	0	31	25	44.6429
RARA	0	genome.wustl.edu	37	17	38499018	38499018	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	38499018	38499018	A	G	SNP	RARA	ENST00000394081	human	ensembl	74_37	+1	known	missense	c.62	p.Y21C	1.000	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARA	HGNC	ENSG00000131759				235	0	0	168	16	8.69565
KRT34	0	genome.wustl.edu	37	17	39535728	39535728	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	39535728	39535728	G	T	SNP	KRT34	ENST00000394001	human	ensembl	74_37	-1	known	silent	c.879	p.T293	0.005	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT34	HGNC	ENSG00000131737				132	0	0	101	40	28.3688
LEPREL4	0	genome.wustl.edu	37	17	39967219	39967219	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	39967219	39967219	T	G	SNP	LEPREL4	ENST00000355468	human	ensembl	74_37	-1	known	missense	c.683	p.E228A	1.000	NULL	NULL	-	no_errors	LEPREL4	HGNC	ENSG00000141696				47	0	0	43	3	6.52174
CNTNAP1	0	genome.wustl.edu	37	17	40842128	40842128	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	40842128	40842128	G	T	SNP	CNTNAP1	ENST00000264638	human	ensembl	74_37	+1	known	missense	c.1758	p.E586D	0.969	superfamily_Fibrinogen_a/b/g_C_dom	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797				237	0	0	111	84	43.0769
SLC4A1	0	genome.wustl.edu	37	17	42328569	42328569	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	42328569	42328569	G	A	SNP	SLC4A1	ENST00000262418	human	ensembl	74_37	-1	known	silent	c.2613	p.R871	0.844	tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_1,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A1	HGNC	ENSG00000004939				27	0	0	14	12	46.1538
SLC25A39	0	genome.wustl.edu	37	17	42399085	42399085	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	42399085	42399085	G	A	SNP	SLC25A39	ENST00000377095	human	ensembl	74_37	-1	known	silent	c.375	p.S125	0.835	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A39	HGNC	ENSG00000013306				68	0	0	37	16	30.1887
ARHGAP27	0	genome.wustl.edu	37	17	43474298	43474298	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	43474298	43474298	G	A	SNP	ARHGAP27	ENST00000428638	human	ensembl	74_37	-1	known	silent	c.1935	p.D645	0.015	NULL	pfam_RhoGAP_dom,pfam_WW_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP27	HGNC	ENSG00000159314				100	0	0	65	4	5.7971
SPPL2C	0	genome.wustl.edu	37	17	43922605	43922605	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	43922605	43922605	G	T	SNP	SPPL2C	ENST00000329196	human	ensembl	74_37	+1	known	missense	c.333	p.Q111H	0.726	pfam_Protease-assoc_domain	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Preselin/SPP	-	no_errors	SPPL2C	HGNC	ENSG00000185294				73	0	0	44	20	31.25
MYBBP1A	0	genome.wustl.edu	37	17	4458481	4458481	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	4458481	4458481	G	T	SNP	MYBBP1A	ENST00000381556	human	ensembl	74_37	-1	known	missense	c.139	p.Q47K	1.000	superfamily_ARM-type_fold	pfam_DNA_pol_V,superfamily_ARM-type_fold	-	no_errors	MYBBP1A	HGNC	ENSG00000132382				17	0	0	20	2	9.09091
ALOX15	0	genome.wustl.edu	37	17	4536710	4536710	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	4536710	4536710	T	C	SNP	ALOX15	ENST00000545513	human	ensembl	74_37	-1	known	missense	c.1313	p.Q438R	0.993	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C	-	no_errors	ALOX15	HGNC	ENSG00000161905				154	0	0	95	52	35.3741
EFCAB13	0	genome.wustl.edu	37	17	45517988	45517988	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	45517988	45517988	A	G	SNP	EFCAB13	ENST00000331493	human	ensembl	74_37	+1	known	missense	c.2830	p.M944V	0.024	NULL	NULL	-	no_errors	EFCAB13	HGNC	ENSG00000178852				74	0	0	65	5	7.14286
KPNB1	0	genome.wustl.edu	37	17	45734239	45734239	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	45734239	45734239	T	C	SNP	KPNB1	ENST00000290158	human	ensembl	74_37	+1	known	missense	c.296	p.L99S	1.000	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	pfam_HEAT,pfam_Importin-beta_N,pfam_Armadillo,superfamily_ARM-type_fold,smart_Importin-beta_N,smart_Armadillo,pfscan_HEAT_type_2,pfscan_Importin-beta_N	-	no_errors	KPNB1	HGNC	ENSG00000108424				80	0	0	49	20	28.9855
HOXB1	0	genome.wustl.edu	37	17	46608177	46608177	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	46608177	46608177	G	T	SNP	HOXB1	ENST00000239174	human	ensembl	74_37	-1	known	silent	c.90	p.S30	0.995	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB1	HGNC	ENSG00000120094				176	0	0	100	20	16.6667
HOXB2	0	genome.wustl.edu	37	17	46620969	46620969	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	46620969	46620969	C	T	SNP	HOXB2	ENST00000330070	human	ensembl	74_37	-1	known	missense	c.532	p.A178T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB2	HGNC	ENSG00000173917				128	0	0	91	19	17.2727
HOXB7	0	genome.wustl.edu	37	17	46685362	46685362	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	46685362	46685362	G	A	SNP	HOXB7	ENST00000239165	human	ensembl	74_37	-1	known	missense	c.496	p.R166W	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXB7	HGNC	ENSG00000260027				176	0	0	153	9	5.55556
ACSF2	0	genome.wustl.edu	37	17	48551125	48551125	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	48551125	48551125	C	T	SNP	ACSF2	ENST00000300441	human	ensembl	74_37	+1	known	silent	c.1575	p.L525	0.707	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSF2	HGNC	ENSG00000167107				151	1	0.657895	95	53	35.8108
WFIKKN2	0	genome.wustl.edu	37	17	48917398	48917398	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	48917398	48917398	G	A	SNP	WFIKKN2	ENST00000311378	human	ensembl	74_37	+1	known	missense	c.749	p.R250Q	0.244	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Prot_inh_Kunz-m,pfam_Ig_I-set,pfam_Netrin_module_non-TIMP,pfam_WAP-type_4-diS_core,pfam_Kazal_dom,pfam_Ig_V-set,superfamily_TIMP-like_OB-fold,superfamily_Prot_inh_Kunz-m,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Ig_sub,smart_Ig_sub2,smart_Prot_inh_Kunz-m,pfscan_Netrin_domain,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Prot_inh_Kunz-m	-	no_errors	WFIKKN2	HGNC	ENSG00000173714				82	0	0	68	14	17.0732
PCTP	0	genome.wustl.edu	37	17	53851118	53851118	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	53851118	53851118	A	G	SNP	PCTP	ENST00000268896	human	ensembl	74_37	+1	known	missense	c.373	p.M125V	0.000	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	PCTP	HGNC	ENSG00000141179				41	0	0	36	10	21.7391
TRIM25	0	genome.wustl.edu	37	17	54969106	54969106	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	54969106	54969106	C	T	SNP	TRIM25	ENST00000316881	human	ensembl	74_37	-1	known	nonsense	c.1848	p.W616*	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM25	HGNC	ENSG00000121060				45	0	0	35	9	20.4545
EPX	0	genome.wustl.edu	37	17	56272434	56272434	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	56272434	56272434	T	C	SNP	EPX	ENST00000225371	human	ensembl	74_37	+1	known	missense	c.704	p.L235P	1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	EPX	HGNC	ENSG00000121053				81	0	0	54	39	41.9355
BZRAP1	0	genome.wustl.edu	37	17	56389308	56389308	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	56389308	56389308	G	A	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	silent	c.2874	p.G958	0.993	pfscan_Fibronectin_type3	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379				49	0	0	35	4	10.2564
USP32	0	genome.wustl.edu	37	17	58270288	58270288	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	58270288	58270288	G	A	SNP	USP32	ENST00000300896	human	ensembl	74_37	-1	known	silent	c.3438	p.D1146	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,smart_EF_hand_dom,smart_Pept_C19_DUSP,pfscan_EF_hand_dom,pfscan_Peptidase_C19/C67,prints_Recoverin	-	no_errors	USP32	HGNC	ENSG00000170832				51	0	0	15	12	44.4444
MED13	0	genome.wustl.edu	37	17	60032892	60032892	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	60032892	60032892	G	A	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	missense	c.5819	p.T1940M	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510				112	0	0	74	4	5.12821
ENSG00000263887	0	genome.wustl.edu	37	17	60369283	60369283	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	60369283	60369283	C	T	SNP	ENSG00000263887	ENST00000602493	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-51L5.5	Clone_based_vega_gene	ENSG00000263887				64	0	0	28	19	40.4255
TANC2	0	genome.wustl.edu	37	17	61497839	61497839	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	61497839	61497839	G	T	SNP	TANC2	ENST00000424789	human	ensembl	74_37	+1	known	missense	c.4496	p.R1499M	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC2	HGNC	ENSG00000170921				60	0	0	54	4	6.89655
ACE	0	genome.wustl.edu	37	17	61559016	61559016	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	61559016	61559016	G	A	SNP	ACE	ENST00000290866	human	ensembl	74_37	+1	known	silent	c.1035	p.G345	0.154	pfam_Peptidase_M2	pfam_Peptidase_M2,prints_Peptidase_M2	-	no_errors	ACE	HGNC	ENSG00000159640				84	0	0	46	35	43.2099
DDX42	0	genome.wustl.edu	37	17	61895733	61895733	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	61895733	61895733	G	A	SNP	DDX42	ENST00000389924	human	ensembl	74_37	+1	known	missense	c.2792	p.R931H	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX42	HGNC	ENSG00000198231				78	0	0	47	34	41.9753
SCN4A	0	genome.wustl.edu	37	17	62022372	62022372	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	62022372	62022372	G	T	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	silent	c.3769	p.R1257	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314				55	0	0	26	10	27.7778
CACNG1	0	genome.wustl.edu	37	17	65040806	65040806	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	65040806	65040806	C	T	SNP	CACNG1	ENST00000226021	human	ensembl	74_37	+1	known	silent	c.30	p.R10	0.031	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_g1su,prints_VDCC_gsu	-	no_errors	CACNG1	HGNC	ENSG00000108878				108	0	0	65	37	36.2745
HELZ	0	genome.wustl.edu	37	17	65190146	65190146	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	65190146	65190146	C	T	SNP	HELZ	ENST00000358691	human	ensembl	74_37	-1	known	missense	c.494	p.G165D	1.000	NULL	pfam_Znf_CCCH,superfamily_P-loop_NTPase,smart_Znf_CCCH	-	no_errors	HELZ	HGNC	ENSG00000198265				39	0	0	11	9	45
XAF1	0	genome.wustl.edu	37	17	6659555	6659555	+	RNA	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	6659555	6659555	T	C	SNP	XAF1	ENST00000575267	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	XAF1	HGNC	ENSG00000132530				8	0	0	9	9	50
ABCA8	0	genome.wustl.edu	37	17	66871434	66871434	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	66871434	66871434	A	G	SNP	ABCA8	ENST00000430352	human	ensembl	74_37	-1	known	missense	c.4598	p.L1533P	0.998	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA8	HGNC	ENSG00000141338				95	0	0	58	10	14.7059
ABCA9	0	genome.wustl.edu	37	17	67045534	67045534	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	67045534	67045534	A	G	SNP	ABCA9	ENST00000340001	human	ensembl	74_37	-1	known	missense	c.194	p.L65P	0.998	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258				86	0	0	64	4	5.88235
ALOX12	0	genome.wustl.edu	37	17	6913275	6913275	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	6913275	6913275	C	T	SNP	ALOX12	ENST00000251535	human	ensembl	74_37	+1	known	silent	c.1642	p.L548	1.000	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C	-	no_errors	ALOX12	HGNC	ENSG00000108839				65	0	0	39	21	35
SLC16A13	0	genome.wustl.edu	37	17	6941568	6941568	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	6941568	6941568	C	T	SNP	SLC16A13	ENST00000308027	human	ensembl	74_37	+1	known	silent	c.441	p.G147	0.979	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Atg22-like,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A13	HGNC	ENSG00000174327				98	0	0	82	5	5.74713
ACADVL	0	genome.wustl.edu	37	17	7125995	7125995	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7125995	7125995	T	C	SNP	ACADVL	ENST00000356839	human	ensembl	74_37	+1	known	silent	c.888	p.P296	0.097	superfamily_AcylCoA_DH/oxidase_NM_dom	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	ACADVL	HGNC	ENSG00000072778				19	0	0	15	5	25
DNAI2	0	genome.wustl.edu	37	17	72306204	72306204	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	72306204	72306204	C	G	SNP	DNAI2	ENST00000311014	human	ensembl	74_37	+1	known	missense	c.1396	p.L466V	0.015	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DNAI2	HGNC	ENSG00000171595				96	0	0	52	30	36.5854
FDXR	0	genome.wustl.edu	37	17	72862943	72862943	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	72862943	72862943	A	G	SNP	FDXR	ENST00000581530	human	ensembl	74_37	-1	known	missense	c.233	p.V78A	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FDXR	HGNC	ENSG00000161513				57	0	0	34	9	20.9302
OTOP2	0	genome.wustl.edu	37	17	72926394	72926394	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	72926394	72926394	G	A	SNP	OTOP2	ENST00000331427	human	ensembl	74_37	+1	known	missense	c.664	p.G222R	0.665	NULL	pfam_Otopetrin	-	no_errors	OTOP2	HGNC	ENSG00000183034				169	0	0	90	43	32.3308
C17orf74	0	genome.wustl.edu	37	17	7330046	7330046	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7330046	7330046	C	T	SNP	C17orf74	ENST00000333870	human	ensembl	74_37	+1	known	missense	c.736	p.R246C	0.990	NULL	NULL	-	no_errors	C17orf74	HGNC	ENSG00000184560				48	0	0	38	24	38.7097
TMEM102	0	genome.wustl.edu	37	17	7339931	7339931	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7339931	7339931	T	C	SNP	TMEM102	ENST00000323206	human	ensembl	74_37	+1	known	silent	c.633	p.S211	0.184	NULL	NULL	-	no_errors	TMEM102	HGNC	ENSG00000181284				128	0	0	74	42	36.2069
KIAA0195	0	genome.wustl.edu	37	17	73487138	73487138	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	73487138	73487138	G	A	SNP	KIAA0195	ENST00000314256	human	ensembl	74_37	+1	known	silent	c.1137	p.L379	0.091	NULL	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	KIAA0195	HGNC	ENSG00000177728				55	0	0	48	12	20
KIAA0195	0	genome.wustl.edu	37	17	73489851	73489851	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	73489851	73489851	T	C	SNP	KIAA0195	ENST00000314256	human	ensembl	74_37	+1	known	missense	c.2261	p.M754T	1.000	NULL	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	KIAA0195	HGNC	ENSG00000177728				148	0	0	133	7	5
LLGL2	0	genome.wustl.edu	37	17	73567789	73567789	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	73567789	73567789	G	T	SNP	LLGL2	ENST00000392550	human	ensembl	74_37	+1	known	missense	c.2218	p.G740C	1.000	NULL	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL2	HGNC	ENSG00000073350				69	0	0	53	5	8.62069
ITGB4	0	genome.wustl.edu	37	17	73750675	73750675	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	73750675	73750675	G	A	SNP	ITGB4	ENST00000200181	human	ensembl	74_37	+1	known	missense	c.4337	p.R1446Q	0.996	pirsf_Integrin_bsu-4	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,prints_Integrin_bsu,pfscan_Fibronectin_type3	-	no_errors	ITGB4	HGNC	ENSG00000132470				83	0	0	61	39	39
UNK	0	genome.wustl.edu	37	17	73805954	73805954	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	73805954	73805954	G	A	SNP	UNK	ENST00000293218	human	ensembl	74_37	+1	known	missense	c.446	p.R149Q	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	UNK	HGNC	ENSG00000132478				81	0	0	35	23	39.6552
UNK	0	genome.wustl.edu	37	17	73813510	73813510	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	73813510	73813510	G	T	SNP	UNK	ENST00000293218	human	ensembl	74_37	+1	known	missense	c.1436	p.G479V	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	UNK	HGNC	ENSG00000132478				92	0	0	72	4	5.26316
POLR2A	0	genome.wustl.edu	37	17	7402384	7402384	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7402384	7402384	C	T	SNP	POLR2A	ENST00000322644	human	ensembl	74_37	+1	known	silent	c.1362	p.D454	1.000	pfam_RNA_pol_asu,smart_RNA_pol_N	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_Rpb1_6,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_7,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_II_repeat_euk,smart_RNA_pol_N	-	no_errors	POLR2A	HGNC	ENSG00000181222				151	0	0	66	33	33.3333
RNF157	0	genome.wustl.edu	37	17	74155544	74155544	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	74155544	74155544	G	A	SNP	RNF157	ENST00000269391	human	ensembl	74_37	-1	known	silent	c.1176	p.G392	1.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF157	HGNC	ENSG00000141576				108	0	0	65	17	20.7317
QRICH2	0	genome.wustl.edu	37	17	74287434	74287434	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	74287434	74287434	C	T	SNP	QRICH2	ENST00000262765	human	ensembl	74_37	-1	known	missense	c.2876	p.G959D	0.004	NULL	NULL	-	no_errors	QRICH2	HGNC	ENSG00000129646				47	0	0	47	5	9.61538
SPHK1	0	genome.wustl.edu	37	17	74383476	74383476	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	74383476	74383476	G	A	SNP	SPHK1	ENST00000323374	human	ensembl	74_37	+1	known	missense	c.1222	p.V408M	0.760	NULL	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	SPHK1	HGNC	ENSG00000176170				52	0	0	25	14	35.8974
AANAT	0	genome.wustl.edu	37	17	74464970	74464970	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	74464970	74464970	G	A	SNP	AANAT	ENST00000250615	human	ensembl	74_37	+1	known	missense	c.277	p.A93T	1.000	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	AANAT	HGNC	ENSG00000129673				59	0	0	37	19	33.9286
FXR2	0	genome.wustl.edu	37	17	7496047	7496047	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7496047	7496047	T	C	SNP	FXR2	ENST00000250113	human	ensembl	74_37	-1	known	missense	c.1694	p.E565G	1.000	NULL	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR2	HGNC	ENSG00000129245				39	0	0	38	30	44.1176
DNAH17	0	genome.wustl.edu	37	17	76510974	76510974	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	76510974	76510974	G	A	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.3983	p.A1328V	1.000	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775				132	0	0	102	14	12.069
DNAH17	0	genome.wustl.edu	37	17	76533562	76533562	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	76533562	76533562	T	C	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.2678	p.E893G	0.027	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775				41	0	0	14	11	44
CNTROB	0	genome.wustl.edu	37	17	7849161	7849161	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7849161	7849161	G	A	SNP	CNTROB	ENST00000380262	human	ensembl	74_37	+1	known	missense	c.1850	p.R617Q	1.000	NULL	NULL	-	no_errors	CNTROB	HGNC	ENSG00000170037				164	0	0	96	43	30.9353
ENTHD2	0	genome.wustl.edu	37	17	79202811	79202811	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	79202811	79202811	C	T	SNP	ENTHD2	ENST00000300714	human	ensembl	74_37	-1	known	missense	c.1495	p.A499T	0.000	NULL	pfam_Epsin_dom_N,superfamily_ENTH_VHS	-	no_errors	ENTHD2	HGNC	ENSG00000167302				73	0	0	59	13	18.0556
ASPSCR1	0	genome.wustl.edu	37	17	79952719	79952719	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	79952719	79952719	G	A	SNP	ASPSCR1	ENST00000306729	human	ensembl	74_37	+1	known	missense	c.397	p.G133R	0.362	NULL	pfam_TUG/UBX4,pfam_UBX,pfscan_UBX	-	no_errors	ASPSCR1	HGNC	ENSG00000169696				125	0	0	73	8	9.87654
FASN	0	genome.wustl.edu	37	17	80046753	80046753	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	80046753	80046753	C	A	SNP	FASN	ENST00000306749	human	ensembl	74_37	-1	known	splice_site	c.2305-1	e14-1	1.000	-	-	-	no_errors	FASN	HGNC	ENSG00000169710				52	0	0	45	6	11.7647
PER1	0	genome.wustl.edu	37	17	8046772	8046772	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	8046772	8046772	C	T	SNP	PER1	ENST00000317276	human	ensembl	74_37	-1	known	missense	c.2884	p.A962T	0.054	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER1	HGNC	ENSG00000179094				31	0	0	23	14	37.8378
WDR45B	0	genome.wustl.edu	37	17	80579639	80579639	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	80579639	80579639	A	G	SNP	WDR45B	ENST00000392325	human	ensembl	74_37	-1	known	missense	c.464	p.L155P	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR45B	HGNC	ENSG00000141580				45	0	0	19	12	38.7097
ZNF750	0	genome.wustl.edu	37	17	80788598	80788598	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	80788598	80788598	G	A	SNP	ZNF750	ENST00000269394	human	ensembl	74_37	-1	known	missense	c.1592	p.T531M	0.000	NULL	NULL	-	no_errors	ZNF750	HGNC	ENSG00000141579				116	0	0	74	27	26.7327
C17orf59	0	genome.wustl.edu	37	17	8092991	8092991	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	8092991	8092991	G	A	SNP	C17orf59	ENST00000389017	human	ensembl	74_37	-1	known	silent	c.468	p.G156	0.497	NULL	pfam_DUF2365	-	no_errors	C17orf59	HGNC	ENSG00000196544				64	0	0	36	16	30.7692
MFSD6L	0	genome.wustl.edu	37	17	8701297	8701297	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	8701297	8701297	A	G	SNP	MFSD6L	ENST00000329805	human	ensembl	74_37	-1	known	missense	c.1142	p.I381T	0.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD6L	HGNC	ENSG00000185156				83	0	0	48	27	36
PIK3R6	0	genome.wustl.edu	37	17	8738638	8738638	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	8738638	8738638	C	T	SNP	PIK3R6	ENST00000311434	human	ensembl	74_37	-1	known	silent	c.597	p.A199	0.001	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R6	HGNC	ENSG00000174083				20	0	0	16	9	36
PIK3R5	0	genome.wustl.edu	37	17	8793299	8793299	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	8793299	8793299	C	T	SNP	PIK3R5	ENST00000447110	human	ensembl	74_37	-1	known	missense	c.802	p.G268R	0.000	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R5	HGNC	ENSG00000141506				76	0	0	50	13	20.6349
RPH3AL	0	genome.wustl.edu	37	17	97064	97064	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	97064	97064	A	G	SNP	RPH3AL	ENST00000331302	human	ensembl	74_37	-1	known	missense	c.451	p.S151P	1.000	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_Znf_FYVE-typ,superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RPH3AL	HGNC	ENSG00000181031				33	0	0	14	7	33.3333
CEP192	0	genome.wustl.edu	37	18	13057734	13057734	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	13057734	13057734	T	C	SNP	CEP192	ENST00000506447	human	ensembl	74_37	+1	known	splice_site	c.4257+2	e19+2	1.000	-	-	-	no_errors	CEP192	HGNC	ENSG00000101639				46	0	0	24	9	27.2727
LAMA3	0	genome.wustl.edu	37	18	21422480	21422480	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	21422480	21422480	G	A	SNP	LAMA3	ENST00000313654	human	ensembl	74_37	+1	known	missense	c.3458	p.R1153Q	0.281	NULL	pfam_EGF_laminin,pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Growth_fac_rcpt_N_dom,superfamily_Galactose-bd-like,superfamily_STAT_TF_coiled-coil,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA3	HGNC	ENSG00000053747				106	0	0	60	32	34.7826
COLEC12	0	genome.wustl.edu	37	18	348068	348068	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	348068	348068	A	T	SNP	COLEC12	ENST00000400256	human	ensembl	74_37	-1	known	missense	c.277	p.L93I	1.000	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	COLEC12	HGNC	ENSG00000158270				50	0	0	14	14	50
PIK3C3	0	genome.wustl.edu	37	18	39617690	39617690	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	39617690	39617690	C	T	SNP	PIK3C3	ENST00000262039	human	ensembl	74_37	+1	known	missense	c.1874	p.T625M	1.000	superfamily_Kinase-like_dom,pirsf_PI3K_Vps34	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pirsf_PI3K_Vps34,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C3	HGNC	ENSG00000078142				141	0	0	62	38	38
PIAS2	0	genome.wustl.edu	37	18	44392421	44392421	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	44392421	44392421	A	G	SNP	PIAS2	ENST00000585916	human	ensembl	74_37	-1	known	missense	c.1841	p.I614T	1.000	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS2	HGNC	ENSG00000078043				24	0	0	13	8	38.0952
ENSG00000173213	0	genome.wustl.edu	37	18	47949	47949	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	47949	47949	G	A	SNP	ENSG00000173213	ENST00000308911	human	ensembl	74_37	-1	known	missense	c.776	p.P259L	1.000	superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Gamma_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	RP11-683L23.1	Clone_based_vega_gene	ENSG00000173213				39	0	0	41	27	39.7059
C18orf54	0	genome.wustl.edu	37	18	51888258	51888258	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	51888258	51888258	A	G	SNP	C18orf54	ENST00000300091	human	ensembl	74_37	+1	known	missense	c.529	p.M177V	0.000	NULL	NULL	-	no_errors	C18orf54	HGNC	ENSG00000166845				66	0	0	37	4	9.7561
C18orf54	0	genome.wustl.edu	37	18	51904589	51904589	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	51904589	51904589	G	A	SNP	C18orf54	ENST00000300091	human	ensembl	74_37	+1	known	silent	c.1092	p.T364	1.000	NULL	NULL	-	no_errors	C18orf54	HGNC	ENSG00000166845				67	0	0	23	13	36.1111
ZBTB14	0	genome.wustl.edu	37	18	5291879	5291879	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	5291879	5291879	A	G	SNP	ZBTB14	ENST00000357006	human	ensembl	74_37	-1	known	missense	c.328	p.S110P	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB14	HGNC	ENSG00000198081				79	0	0	55	16	22.5352
WDR7	0	genome.wustl.edu	37	18	54603098	54603098	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	54603098	54603098	G	A	SNP	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	missense	c.3793	p.A1265T	1.000	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157				141	0	0	65	45	40.9091
ATP8B1	0	genome.wustl.edu	37	18	55355551	55355551	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	55355551	55355551	C	T	SNP	ATP8B1	ENST00000283684	human	ensembl	74_37	-1	known	missense	c.1409	p.C470Y	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B1	HGNC	ENSG00000081923				142	0	0	58	29	33.3333
KIAA1468	0	genome.wustl.edu	37	18	59936180	59936180	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	59936180	59936180	A	G	SNP	KIAA1468	ENST00000256858	human	ensembl	74_37	+1	known	missense	c.2759	p.Q920R	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_HEAT_type_2,pfscan_LisH_dimerisation	-	no_errors	KIAA1468	HGNC	ENSG00000134444				30	0	0	8	3	27.2727
KIAA1468	0	genome.wustl.edu	37	18	59966038	59966038	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	59966038	59966038	A	G	SNP	KIAA1468	ENST00000256858	human	ensembl	74_37	+1	known	missense	c.3577	p.M1193V	1.000	NULL	pfam_HEAT,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_HEAT_type_2,pfscan_LisH_dimerisation	-	no_errors	KIAA1468	HGNC	ENSG00000134444				43	0	0	17	5	22.7273
CDH7	0	genome.wustl.edu	37	18	63525178	63525178	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	63525178	63525178	A	G	SNP	CDH7	ENST00000323011	human	ensembl	74_37	+1	known	silent	c.1362	p.A454	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC	ENSG00000081138				71	0	0	41	23	35.9375
CYB5A	0	genome.wustl.edu	37	18	71928150	71928150	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	71928150	71928150	C	T	SNP	CYB5A	ENST00000340533	human	ensembl	74_37	-1	known	silent	c.288	p.P96	0.789	superfamily_Cyt_B5-like_heme/steroid-bd	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	CYB5A	HGNC	ENSG00000166347				93	0	0	40	27	40.2985
CNDP2	0	genome.wustl.edu	37	18	72180856	72180856	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	72180856	72180856	G	A	SNP	CNDP2	ENST00000324262	human	ensembl	74_37	+1	known	missense	c.805	p.V269I	0.617	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP2	HGNC	ENSG00000133313				99	0	0	61	28	31.4607
CNDP1	0	genome.wustl.edu	37	18	72229332	72229332	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	72229332	72229332	T	C	SNP	CNDP1	ENST00000358821	human	ensembl	74_37	+1	known	missense	c.517	p.W173R	0.999	pfam_Peptidase_M20,pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP1	HGNC	ENSG00000150656				119	0	0	37	26	41.2698
ADNP2	0	genome.wustl.edu	37	18	77893889	77893889	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	77893889	77893889	C	T	SNP	ADNP2	ENST00000262198	human	ensembl	74_37	+1	known	missense	c.593	p.P198L	0.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ADNP2	HGNC	ENSG00000101544				96	0	0	36	27	42.8571
TXNDC2	0	genome.wustl.edu	37	18	9886919	9886919	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	9886919	9886919	A	G	SNP	TXNDC2	ENST00000306084	human	ensembl	74_37	+1	known	missense	c.443	p.N148S	0.000	pfam_Glutenin	pfam_Thioredoxin_domain,pfam_Glutenin,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC2	HGNC	ENSG00000168454				155	0	0	190	65	25.4902
PDE4A	0	genome.wustl.edu	37	19	10559812	10559812	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	10559812	10559812	C	T	SNP	PDE4A	ENST00000352831	human	ensembl	74_37	+1	known	silent	c.606	p.P202	0.989	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4A	HGNC	ENSG00000065989				16	0	0	19	5	20.8333
DNM2	0	genome.wustl.edu	37	19	10934500	10934500	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	10934500	10934500	C	A	SNP	DNM2	ENST00000314646	human	ensembl	74_37	+1	known	silent	c.1818	p.A606	0.998	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM2	HGNC	ENSG00000079805				118	0	0	58	23	28.3951
YIPF2	0	genome.wustl.edu	37	19	11034828	11034828	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	11034828	11034828	G	A	SNP	YIPF2	ENST00000253031	human	ensembl	74_37	-1	known	silent	c.408	p.A136	0.008	pfam_Yip1	pfam_Yip1	-	no_errors	YIPF2	HGNC	ENSG00000130733				45	0	0	35	18	33.9623
SMARCA4	0	genome.wustl.edu	37	19	11097604	11097604	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	11097604	11097604	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.784	p.P262S	0.991	NULL	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				93	0	0	27	22	44.898
DOCK6	0	genome.wustl.edu	37	19	11326072	11326072	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	11326072	11326072	C	T	SNP	DOCK6	ENST00000294618	human	ensembl	74_37	-1	known	missense	c.4097	p.R1366H	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N	-	no_errors	DOCK6	HGNC	ENSG00000130158				47	0	0	18	12	40
DOCK6	0	genome.wustl.edu	37	19	11356364	11356364	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	11356364	11356364	G	T	SNP	DOCK6	ENST00000294618	human	ensembl	74_37	-1	known	missense	c.898	p.L300M	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N	-	no_errors	DOCK6	HGNC	ENSG00000130158				20	0	0	19	3	13.6364
ZNF625	0	genome.wustl.edu	37	19	12256320	12256320	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	12256320	12256320	T	C	SNP	ZNF625	ENST00000439556	human	ensembl	74_37	-1	known	missense	c.911	p.E304G	0.014	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF625	HGNC	ENSG00000257591				94	0	0	98	7	6.66667
ZNF799	0	genome.wustl.edu	37	19	12501535	12501535	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	12501535	12501535	G	T	SNP	ZNF799	ENST00000430385	human	ensembl	74_37	-1	known	silent	c.1677	p.P559	0.008	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF799	HGNC	ENSG00000196466				104	0	0	49	50	50.5051
TNPO2	0	genome.wustl.edu	37	19	12822199	12822199	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	12822199	12822199	A	G	SNP	TNPO2	ENST00000425528	human	ensembl	74_37	-1	known	missense	c.1028	p.V343A	1.000	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	TNPO2	HGNC	ENSG00000105576				222	0	0	200	13	6.10329
JUNB	0	genome.wustl.edu	37	19	12903208	12903208	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	12903208	12903208	A	G	SNP	JUNB	ENST00000302754	human	ensembl	74_37	+1	known	missense	c.623	p.Y208C	1.000	pfam_JNK	pfam_JNK,pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Jun	-	no_errors	JUNB	HGNC	ENSG00000171223				18	0	0	18	10	35.7143
NACC1	0	genome.wustl.edu	37	19	13246947	13246947	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	13246947	13246947	T	C	SNP	NACC1	ENST00000292431	human	ensembl	74_37	+1	known	missense	c.926	p.M309T	1.000	NULL	pfam_BTB_POZ,pfam_BEN_domain,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	NACC1	HGNC	ENSG00000160877				53	0	0	53	12	18.4615
NDUFS7	0	genome.wustl.edu	37	19	1390983	1390983	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	1390983	1390983	G	A	SNP	NDUFS7	ENST00000233627	human	ensembl	74_37	+1	known	silent	c.342	p.P114	0.679	pfam_NADH_UbQ_OxRdtase-like_20kDa,tigrfam_NADH_UQ_OxRdtase_20Kd_su	pfam_NADH_UbQ_OxRdtase-like_20kDa,tigrfam_NADH_UQ_OxRdtase_20Kd_su	-	no_errors	NDUFS7	HGNC	ENSG00000115286				66	0	0	43	33	43.4211
CC2D1A	0	genome.wustl.edu	37	19	14020713	14020713	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	14020713	14020713	T	C	SNP	CC2D1A	ENST00000318003	human	ensembl	74_37	+1	known	silent	c.138	p.A46	0.329	NULL	pfam_C2_dom,superfamily_C2_dom,smart_DM14,smart_C2_dom	-	no_errors	CC2D1A	HGNC	ENSG00000132024				76	0	0	64	5	7.24638
DAZAP1	0	genome.wustl.edu	37	19	1421167	1421167	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	1421167	1421167	T	C	SNP	DAZAP1	ENST00000233078	human	ensembl	74_37	+1	known	silent	c.324	p.D108	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	DAZAP1	HGNC	ENSG00000071626				139	0	0	111	8	6.72269
LPHN1	0	genome.wustl.edu	37	19	14271455	14271455	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	14271455	14271455	G	T	SNP	LPHN1	ENST00000340736	human	ensembl	74_37	-1	known	missense	c.1579	p.P527T	1.000	pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN1	HGNC	ENSG00000072071				25	0	0	20	15	42.8571
PKN1	0	genome.wustl.edu	37	19	14561159	14561159	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	14561159	14561159	C	T	SNP	PKN1	ENST00000342216	human	ensembl	74_37	+1	known	missense	c.658	p.R220C	1.000	pfam_HR1_rho-bd,superfamily_HR1_rho-bd,smart_HR1_rho-bd	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN1	HGNC	ENSG00000123143				16	0	0	10	10	50
AKAP8	0	genome.wustl.edu	37	19	15466095	15466095	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	15466095	15466095	A	G	SNP	AKAP8	ENST00000269701	human	ensembl	74_37	-1	known	silent	c.1710	p.P570	0.001	NULL	pfam_AKAP95	-	no_errors	AKAP8	HGNC	ENSG00000105127				135	0	0	75	46	38.0165
CHERP	0	genome.wustl.edu	37	19	16631029	16631029	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	16631029	16631029	G	A	SNP	CHERP	ENST00000546361	human	ensembl	74_37	-1	known	missense	c.2393	p.S798L	0.935	NULL	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872				93	0	0	81	5	5.81395
CHERP	0	genome.wustl.edu	37	19	16641463	16641463	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	16641463	16641463	T	G	SNP	CHERP	ENST00000546361	human	ensembl	74_37	-1	known	missense	c.809	p.N270T	1.000	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872				160	0	0	133	9	6.33803
ANKLE1	0	genome.wustl.edu	37	19	17394613	17394613	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	17394613	17394613	G	T	SNP	ANKLE1	ENST00000394458	human	ensembl	74_37	+1	known	missense	c.1040	p.R347M	0.062	NULL	pfam_Ankyrin_rpt,pfam_LEM_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_LEM/LEM-like_dom,superfamily_Lactate_DH/Glyco_Ohase_4_C,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_LEM_dom	-	no_errors	ANKLE1	HGNC	ENSG00000160117				89	0	0	63	24	27.5862
ABHD8	0	genome.wustl.edu	37	19	17405603	17405603	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	17405603	17405603	C	A	SNP	ABHD8	ENST00000247706	human	ensembl	74_37	-1	known	missense	c.813	p.K271N	0.957	pfam_AB_hydrolase_1,prints_AB_hydrolase_1	pfam_AB_hydrolase_1,prints_AB_hydrolase_1,prints_Epox_hydrolase-like	-	no_errors	ABHD8	HGNC	ENSG00000127220				53	0	0	40	5	11.1111
FCHO1	0	genome.wustl.edu	37	19	17883346	17883346	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	17883346	17883346	G	T	SNP	FCHO1	ENST00000252771	human	ensembl	74_37	+1	known	silent	c.675	p.T225	0.696	NULL	pfam_Muniscin_C-term_mu_dom,pfam_FCH_dom,superfamily_Clathrin_mu_C,smart_FCH_dom,pfscan_FCH_dom	-	no_errors	FCHO1	HGNC	ENSG00000130475				57	0	0	37	33	47.1429
PIK3R2	0	genome.wustl.edu	37	19	18273783	18273783	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	18273783	18273783	C	T	SNP	PIK3R2	ENST00000222254	human	ensembl	74_37	+1	known	silent	c.1116	p.G372	0.430	pfam_SH2,smart_SH2,pfscan_SH2	pfam_SH2,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_SH3_domain,smart_RhoGAP_dom,smart_SH2,pfscan_SH2,pfscan_SH3_domain,pfscan_RhoGAP_dom,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R2	HGNC	ENSG00000105647				51	0	0	54	4	6.89655
KIAA1683	0	genome.wustl.edu	37	19	18376524	18376524	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	18376524	18376524	C	T	SNP	KIAA1683	ENST00000392413	human	ensembl	74_37	-1	known	missense	c.1826	p.G609D	0.000	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	KIAA1683	HGNC	ENSG00000130518				78	0	0	36	22	37.931
ELL	0	genome.wustl.edu	37	19	18561556	18561556	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	18561556	18561556	T	C	SNP	ELL	ENST00000262809	human	ensembl	74_37	-1	known	missense	c.1196	p.D399G	0.993	NULL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL	HGNC	ENSG00000105656				9	0	0	15	5	25
CRTC1	0	genome.wustl.edu	37	19	18876242	18876242	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	18876242	18876242	G	A	SNP	CRTC1	ENST00000338797	human	ensembl	74_37	+1	known	silent	c.963	p.Q321	1.000	NULL	NULL	-	no_errors	CRTC1	HGNC	ENSG00000105662				227	0	0	129	80	38.2775
COMP	0	genome.wustl.edu	37	19	18899282	18899282	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	18899282	18899282	G	A	SNP	COMP	ENST00000222271	human	ensembl	74_37	-1	known	silent	c.804	p.R268	0.001	NULL	pfam_Thrombospondin_C,pfam_EGF-like_Ca-bd_dom,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	COMP	HGNC	ENSG00000105664				23	0	0	15	5	25
SCAMP4	0	genome.wustl.edu	37	19	1918915	1918915	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	1918915	1918915	G	A	SNP	SCAMP4	ENST00000316097	human	ensembl	74_37	+1	known	silent	c.321	p.A107	0.860	pfam_SCAMP	pfam_SCAMP	-	no_errors	SCAMP4	HGNC	ENSG00000227500				33	0	0	13	4	23.5294
SUGP1	0	genome.wustl.edu	37	19	19407809	19407809	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	19407809	19407809	G	A	SNP	SUGP1	ENST00000247001	human	ensembl	74_37	-1	known	missense	c.1232	p.S411L	0.702	NULL	pfam_Surp,pfam_G_patch_dom,superfamily_Surp,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	SUGP1	HGNC	ENSG00000105705				20	0	0	8	16	66.6667
MAU2	0	genome.wustl.edu	37	19	19455695	19455695	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	19455695	19455695	G	T	SNP	MAU2	ENST00000262815	human	ensembl	74_37	+1	known	missense	c.1115	p.R372L	1.000	pfam_Cohesin_loading_factor	pfam_Cohesin_loading_factor,smart_TPR_repeat	-	no_errors	MAU2	HGNC	ENSG00000129933				38	0	0	28	5	15.1515
GATAD2A	0	genome.wustl.edu	37	19	19613208	19613208	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	19613208	19613208	A	G	SNP	GATAD2A	ENST00000358713	human	ensembl	74_37	+1	known	silent	c.1644	p.S548	0.274	NULL	pfam_Znf_GATA,pfscan_Znf_GATA	-	no_errors	GATAD2A	HGNC	ENSG00000167491				177	0	0	143	8	5.29801
GMIP	0	genome.wustl.edu	37	19	19751333	19751333	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	19751333	19751333	C	T	SNP	GMIP	ENST00000203556	human	ensembl	74_37	-1	known	missense	c.286	p.A96T	0.434	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	GMIP	HGNC	ENSG00000089639				92	0	0	44	23	34.3284
ATP13A1	0	genome.wustl.edu	37	19	19758069	19758069	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	19758069	19758069	C	A	SNP	ATP13A1	ENST00000357324	human	ensembl	74_37	-1	known	missense	c.2974	p.A992S	1.000	tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A1	HGNC	ENSG00000105726				173	0	0	77	44	36.3636
ATP13A1	0	genome.wustl.edu	37	19	19770428	19770428	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	19770428	19770428	T	C	SNP	ATP13A1	ENST00000357324	human	ensembl	74_37	-1	known	missense	c.659	p.K220R	1.000	tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A1	HGNC	ENSG00000105726				75	0	0	38	17	30.9091
ZNF506	0	genome.wustl.edu	37	19	19905686	19905686	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	19905686	19905686	C	T	SNP	ZNF506	ENST00000443905	human	ensembl	74_37	-1	known	missense	c.1010	p.G337E	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF506	HGNC	ENSG00000081665				82	0	0	65	5	7.14286
MKNK2	0	genome.wustl.edu	37	19	2041038	2041038	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	2041038	2041038	C	T	SNP	MKNK2	ENST00000250896	human	ensembl	74_37	-1	known	splice_site	c.1110+1	e11+1	1.000	-	-	-	no_errors	MKNK2	HGNC	ENSG00000099875				88	0	0	62	42	40.3846
ZNF737	0	genome.wustl.edu	37	19	20728085	20728085	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	20728085	20728085	G	A	SNP	ZNF737	ENST00000427401	human	ensembl	74_37	-1	known	silent	c.924	p.S308	0.997	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF737	HGNC	ENSG00000237440				34	0	0	43	4	8.51064
MOB3A	0	genome.wustl.edu	37	19	2078215	2078215	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	2078215	2078215	C	T	SNP	MOB3A	ENST00000357066	human	ensembl	74_37	-1	known	silent	c.345	p.A115	0.007	pfam_Mob1_phocein,superfamily_Mob1_phocein	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB3A	HGNC	ENSG00000172081				33	0	0	24	9	27.2727
DOT1L	0	genome.wustl.edu	37	19	2211118	2211118	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	2211118	2211118	A	G	SNP	DOT1L	ENST00000398665	human	ensembl	74_37	+1	known	missense	c.1372	p.S458G	1.000	pirsf_Histone_H3-K79_MeTrfase_met	pfam_DOT1,pirsf_Histone_H3-K79_MeTrfase_met	-	no_errors	DOT1L	HGNC	ENSG00000104885				164	1	0.606061	151	8	5.03145
ZNF676	0	genome.wustl.edu	37	19	22363929	22363929	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	22363929	22363929	T	A	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.590	p.Y197F	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				61	0	0	37	6	13.9535
JSRP1	0	genome.wustl.edu	37	19	2254198	2254198	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	2254198	2254198	T	G	SNP	JSRP1	ENST00000300961	human	ensembl	74_37	-1	known	missense	c.250	p.K84Q	0.811	NULL	NULL	-	no_errors	JSRP1	HGNC	ENSG00000167476				216	0	0	152	37	19.5767
SPPL2B	0	genome.wustl.edu	37	19	2351625	2351625	+	RNA	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	2351625	2351625	A	G	SNP	SPPL2B	ENST00000452401	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SPPL2B	HGNC	ENSG00000005206				81	0	0	48	4	7.69231
ZNF91	0	genome.wustl.edu	37	19	23543932	23543932	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	23543932	23543932	G	T	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	missense	c.1849	p.L617I	0.002	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232				63	0	0	54	7	11.4754
TLE2	0	genome.wustl.edu	37	19	3005804	3005804	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	3005804	3005804	C	T	SNP	TLE2	ENST00000262953	human	ensembl	74_37	-1	known	missense	c.1663	p.V555I	0.998	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Groucho_enhance,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TLE2	HGNC	ENSG00000065717				88	0	0	64	5	7.24638
ZNF536	0	genome.wustl.edu	37	19	30934699	30934699	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	30934699	30934699	T	C	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.230	p.M77T	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597				38	0	0	42	17	28.8136
S1PR4	0	genome.wustl.edu	37	19	3179136	3179136	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	3179136	3179136	G	A	SNP	S1PR4	ENST00000246115	human	ensembl	74_37	+1	known	missense	c.346	p.A116T	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_EDG6_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn	-	no_errors	S1PR4	HGNC	ENSG00000125910				94	0	0	84	6	6.66667
SLC7A9	0	genome.wustl.edu	37	19	33350757	33350757	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	33350757	33350757	G	A	SNP	SLC7A9	ENST00000023064	human	ensembl	74_37	-1	known	missense	c.863	p.A288V	1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A9	HGNC	ENSG00000021488				61	0	0	25	24	48.9796
LSM14A	0	genome.wustl.edu	37	19	34712563	34712563	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	34712563	34712563	A	G	SNP	LSM14A	ENST00000433627	human	ensembl	74_37	+1	known	missense	c.1288	p.T430A	0.871	NULL	pfam_FDF_dom,superfamily_LSM_dom	-	no_errors	LSM14A	HGNC	ENSG00000257103				64	0	0	40	22	35.4839
MAG	0	genome.wustl.edu	37	19	35791237	35791237	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	35791237	35791237	C	T	SNP	MAG	ENST00000392213	human	ensembl	74_37	+1	known	silent	c.900	p.D300	0.999	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MAG	HGNC	ENSG00000105695				53	0	0	22	15	40.5405
SBSN	0	genome.wustl.edu	37	19	36017595	36017595	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	36017595	36017595	G	A	SNP	SBSN	ENST00000518157	human	ensembl	74_37	-1	known	missense	c.560	p.A187V	0.975	NULL	NULL	-	no_errors	SBSN	HGNC	ENSG00000189001				179	0	0	88	9	9.27835
ATP4A	0	genome.wustl.edu	37	19	36042379	36042379	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	36042379	36042379	C	T	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	missense	c.2855	p.R952H	1.000	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675				59	0	0	24	8	25
THEG	0	genome.wustl.edu	37	19	362324	362324	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	362324	362324	A	G	SNP	THEG	ENST00000342640	human	ensembl	74_37	-1	known	missense	c.1016	p.L339P	0.792	smart_THEG	smart_THEG	-	no_errors	THEG	HGNC	ENSG00000105549				189	0	0	95	29	23.3871
PIP5K1C	0	genome.wustl.edu	37	19	3651850	3651850	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	3651850	3651850	G	A	SNP	PIP5K1C	ENST00000537021	human	ensembl	74_37	-1	known	silent	c.1101	p.R367	0.615	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5K1C	HGNC	ENSG00000186111				91	0	0	33	24	42.1053
POLR2I	0	genome.wustl.edu	37	19	36605757	36605757	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	36605757	36605757	A	G	SNP	POLR2I	ENST00000221859	human	ensembl	74_37	-1	known	missense	c.2	p.M1T	1.000	NULL	pfam_DNA-dir_RNA_pol_M/15kDasu,pfam_Znf_TFIIS,smart_DNA-dir_RNA_pol_M/15kDasu,smart_Znf_TFIIS,pfscan_Znf_TFIIS	-	no_errors	POLR2I	HGNC	ENSG00000105258				140	0	0	99	56	36.129
ZFR2	0	genome.wustl.edu	37	19	3823364	3823364	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	3823364	3823364	C	A	SNP	ZFR2	ENST00000262961	human	ensembl	74_37	-1	known	missense	c.1251	p.Q417H	0.000	NULL	pfam_DZF,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR2	HGNC	ENSG00000105278				89	0	0	46	18	28.125
RYR1	0	genome.wustl.edu	37	19	38948932	38948932	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	38948932	38948932	G	A	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.2167	p.G723R	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				238	0	0	169	12	6.62983
RYR1	0	genome.wustl.edu	37	19	39068588	39068588	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	39068588	39068588	C	T	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.14203	p.R4735W	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				91	0	0	55	24	30.3797
HNRNPL	0	genome.wustl.edu	37	19	39334550	39334550	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	39334550	39334550	G	A	SNP	HNRNPL	ENST00000221419	human	ensembl	74_37	-1	known	missense	c.812	p.T271I	0.999	tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	HNRNPL	HGNC	ENSG00000104824				84	0	0	57	30	34.4828
EEF2	0	genome.wustl.edu	37	19	3976713	3976713	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	3976713	3976713	C	T	SNP	EEF2	ENST00000309311	human	ensembl	74_37	-1	known	missense	c.2416	p.G806S	0.999	pfam_EFG_V,superfamily_EFG_III-V,smart_EFG_V	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EEF2	HGNC	ENSG00000167658				24	0	0	13	7	35
DYRK1B	0	genome.wustl.edu	37	19	40319090	40319090	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	40319090	40319090	C	T	SNP	DYRK1B	ENST00000323039	human	ensembl	74_37	-1	known	silent	c.654	p.A218	0.986	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1B	HGNC	ENSG00000105204				18	0	0	24	8	25
FCGBP	0	genome.wustl.edu	37	19	40364151	40364151	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	40364151	40364151	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.14491	p.A4831T	0.000	smart_VWC_out	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920				50	0	0	39	10	20.4082
PSMC4	0	genome.wustl.edu	37	19	40480653	40480653	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	40480653	40480653	T	C	SNP	PSMC4	ENST00000157812	human	ensembl	74_37	+1	known	silent	c.591	p.D197	0.585	superfamily_P-loop_NTPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC4	HGNC	ENSG00000013275				59	0	0	32	11	25.5814
PRX	0	genome.wustl.edu	37	19	40904471	40904471	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	40904471	40904471	G	T	SNP	PRX	ENST00000291825	human	ensembl	74_37	-1	known	missense	c.437	p.A146E	0.953	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PRX	HGNC	ENSG00000105227				70	0	0	27	24	47.0588
SPTBN4	0	genome.wustl.edu	37	19	41008833	41008833	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	41008833	41008833	T	C	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	missense	c.1355	p.V452A	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460				92	0	0	75	18	19.3548
ADCK4	0	genome.wustl.edu	37	19	41220300	41220300	+	Silent	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	41220300	41220300	T	A	SNP	ADCK4	ENST00000324464	human	ensembl	74_37	-1	known	silent	c.105	p.G35	0.005	NULL	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK4	HGNC	ENSG00000123815				124	0	0	103	11	9.64912
CEACAM5	0	genome.wustl.edu	37	19	42224958	42224958	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	42224958	42224958	A	G	SNP	CEACAM5	ENST00000221992	human	ensembl	74_37	+1	known	missense	c.1888	p.N630D	0.010	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM5	HGNC	ENSG00000105388				168	0	0	137	12	8.05369
SHD	0	genome.wustl.edu	37	19	4280240	4280240	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	4280240	4280240	T	C	SNP	SHD	ENST00000543264	human	ensembl	74_37	+1	known	silent	c.180	p.P60	0.006	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SHD	HGNC	ENSG00000105251				35	0	0	34	3	8.10811
SHD	0	genome.wustl.edu	37	19	4282880	4282880	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	4282880	4282880	C	T	SNP	SHD	ENST00000543264	human	ensembl	74_37	+1	known	missense	c.311	p.T104I	0.490	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SHD	HGNC	ENSG00000105251				116	0	0	91	5	5.20833
PSG3	0	genome.wustl.edu	37	19	43237181	43237181	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	43237181	43237181	T	C	SNP	PSG3	ENST00000327495	human	ensembl	74_37	-1	known	missense	c.464	p.N155S	0.002	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG3	HGNC	ENSG00000221826				273	0	0	171	75	30.4878
PSG3	0	genome.wustl.edu	37	19	43243059	43243059	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	43243059	43243059	C	T	SNP	PSG3	ENST00000327495	human	ensembl	74_37	-1	known	missense	c.247	p.V83I	0.000	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG3	HGNC	ENSG00000221826				391	0	0	316	19	5.67164
PSG11	0	genome.wustl.edu	37	19	43529018	43529018	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	43529018	43529018	G	A	SNP	PSG11	ENST00000320078	human	ensembl	74_37	-1	known	silent	c.255	p.D85	0.000	pfam_Ig_V-set,smart_Ig_sub	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG11	HGNC	ENSG00000243130				267	1	0.373134	138	52	27.3684
ZNF230	0	genome.wustl.edu	37	19	44515243	44515243	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	44515243	44515243	T	C	SNP	ZNF230	ENST00000429154	human	ensembl	74_37	+1	known	missense	c.1052	p.L351P	0.004	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF230	HGNC	ENSG00000159882				132	0	0	85	53	38.4058
ZNF226	0	genome.wustl.edu	37	19	44679757	44679757	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	44679757	44679757	T	C	SNP	ZNF226	ENST00000337433	human	ensembl	74_37	+1	known	silent	c.342	p.C114	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF226	HGNC	ENSG00000167380				67	0	0	32	7	17.9487
ZNF180	0	genome.wustl.edu	37	19	45001352	45001352	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	45001352	45001352	G	A	SNP	ZNF180	ENST00000590088	human	ensembl	74_37	-1	known	nonsense	c.121	p.R41*	0.012	NULL	NULL	-	no_errors	ZNF180	HGNC	ENSG00000167384				32	0	0	19	9	32.1429
PLIN5	0	genome.wustl.edu	37	19	4529193	4529193	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	4529193	4529193	G	A	SNP	PLIN5	ENST00000381848	human	ensembl	74_37	-1	known	missense	c.412	p.R138C	1.000	pfam_Perilipin,pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN5	HGNC	ENSG00000214456				186	0	0	102	58	36.25
NKPD1	0	genome.wustl.edu	37	19	45655872	45655872	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	45655872	45655872	C	T	SNP	NKPD1	ENST00000317951	human	ensembl	74_37	-1	known	missense	c.1823	p.R608H	0.936	pfam_KAP_NTPase	pfam_KAP_NTPase	-	no_errors	NKPD1	HGNC	ENSG00000179846				19	0	0	20	6	23.0769
CD3EAP	0	genome.wustl.edu	37	19	45910493	45910493	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	45910493	45910493	G	T	SNP	CD3EAP	ENST00000589804	human	ensembl	74_37	+1	known	missense	c.170	p.C57F	0.998	pfam_DNA-dir_RNA_pol1_su_RPA34	pfam_DNA-dir_RNA_pol1_su_RPA34	-	no_errors	CD3EAP	HGNC	ENSG00000117877				65	0	0	74	4	5.12821
EML2	0	genome.wustl.edu	37	19	46122427	46122427	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	46122427	46122427	C	T	SNP	EML2	ENST00000587152	human	ensembl	74_37	-1	known	missense	c.1748	p.G583D	1.000	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Quinoprot_gluc/sorb_DH,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML2	HGNC	ENSG00000125746				19	0	0	15	14	48.2759
PRKD2	0	genome.wustl.edu	37	19	47201084	47201084	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	47201084	47201084	A	G	SNP	PRKD2	ENST00000291281	human	ensembl	74_37	-1	known	missense	c.1145	p.M382T	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD2	HGNC	ENSG00000105287				157	0	0	74	48	39.3443
STRN4	0	genome.wustl.edu	37	19	47228899	47228899	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	47228899	47228899	C	T	SNP	STRN4	ENST00000391910	human	ensembl	74_37	-1	known	missense	c.1276	p.D426N	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_Striatin_N,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	STRN4	HGNC	ENSG00000090372				58	0	0	30	16	34.7826
FKRP	0	genome.wustl.edu	37	19	47260136	47260136	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	47260136	47260136	G	A	SNP	FKRP	ENST00000318584	human	ensembl	74_37	+1	known	missense	c.1429	p.V477I	1.000	NULL	pfam_LicD	-	no_errors	FKRP	HGNC	ENSG00000181027				23	0	0	11	3	21.4286
NPAS1	0	genome.wustl.edu	37	19	47548495	47548495	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	47548495	47548495	C	T	SNP	NPAS1	ENST00000449844	human	ensembl	74_37	+1	known	silent	c.1359	p.N453	0.024	NULL	pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS1	HGNC	ENSG00000130751				69	0	0	51	5	8.92857
DHX34	0	genome.wustl.edu	37	19	47856680	47856680	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	47856680	47856680	T	C	SNP	DHX34	ENST00000328771	human	ensembl	74_37	+1	known	silent	c.393	p.A131	0.000	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX34	HGNC	ENSG00000134815				123	0	0	128	11	7.91367
LIG1	0	genome.wustl.edu	37	19	48657203	48657203	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	48657203	48657203	C	T	SNP	LIG1	ENST00000263274	human	ensembl	74_37	-1	known	missense	c.392	p.R131Q	0.947	NULL	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_DNA_ligase_ATP-dep_C,superfamily_DNA_ligase_ATP-dep_N,superfamily_NA-bd_OB-fold,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG1	HGNC	ENSG00000105486				34	0	0	22	6	21.4286
DBP	0	genome.wustl.edu	37	19	49140174	49140174	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	49140174	49140174	T	C	SNP	DBP	ENST00000222122	human	ensembl	74_37	-1	known	silent	c.78	p.G26	0.995	NULL	pfam_bZIP,smart_bZIP,pfscan_bZIP	-	no_errors	DBP	HGNC	ENSG00000105516				12	0	0	7	3	30
GYS1	0	genome.wustl.edu	37	19	49472668	49472668	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	49472668	49472668	C	T	SNP	GYS1	ENST00000323798	human	ensembl	74_37	-1	known	silent	c.2091	p.A697	1.000	NULL	pfam_Glycogen_synth,pfam_Glyco_trans_1,pfam_Starch_synth_cat_dom	-	no_errors	GYS1	HGNC	ENSG00000104812				9	0	0	8	7	46.6667
RUVBL2	0	genome.wustl.edu	37	19	49510567	49510567	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	49510567	49510567	C	T	SNP	RUVBL2	ENST00000595090	human	ensembl	74_37	+1	known	missense	c.404	p.T135M	0.998	pfam_TIP49_C,superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold,smart_AAA+_ATPase	pfam_TIP49_C,pfam_ATPase_AAA_core,pfam_DNA_helicase_DnaB-like_C,superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold,smart_AAA+_ATPase,prints_DNA_repair_RadA	-	no_errors	RUVBL2	HGNC	ENSG00000183207				73	0	0	39	18	31.5789
HRC	0	genome.wustl.edu	37	19	49658084	49658084	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	49658084	49658084	G	A	SNP	HRC	ENST00000252825	human	ensembl	74_37	-1	known	silent	c.411	p.H137	0.000	NULL	pfam_Hist_rich_Ca-bd	-	no_errors	HRC	HGNC	ENSG00000130528				110	0	0	83	33	28.4483
RPL13A	0	genome.wustl.edu	37	19	49994304	49994304	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	49994304	49994304	G	A	SNP	RPL13A	ENST00000391857	human	ensembl	74_37	+1	known	missense	c.350	p.R117Q	1.000	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,tigrfam_Ribosomal_L13_euk/arc	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,tigrfam_Ribosomal_L13_euk/arc	-	no_errors	RPL13A	HGNC	ENSG00000142541				66	0	0	43	28	39.4366
PRR12	0	genome.wustl.edu	37	19	50099557	50099557	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	50099557	50099557	C	A	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	silent	c.1965	p.T655	1.000	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464				27	0	0	19	4	17.3913
PRR12	0	genome.wustl.edu	37	19	50102912	50102912	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	50102912	50102912	T	C	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	silent	c.4062	p.G1354	0.982	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464				30	0	0	35	4	10.2564
PRMT1	0	genome.wustl.edu	37	19	50191500	50191500	+	Nonstop_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	50191500	50191500	T	C	SNP	PRMT1	ENST00000454376	human	ensembl	74_37	+1	known	nonstop	c.1114	p.*372R	1.000	NULL	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_Small_mtfrase_dom,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT1	HGNC	ENSG00000126457				119	1	0.833333	93	55	37.1622
SIGLEC16	0	genome.wustl.edu	37	19	50475335	50475335	+	RNA	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	50475335	50475335	T	C	SNP	SIGLEC16	ENST00000602139	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	SIGLEC16	HGNC	ENSG00000161643				86	0	0	84	5	5.61798
ZNF473	0	genome.wustl.edu	37	19	50542460	50542460	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	50542460	50542460	G	A	SNP	ZNF473	ENST00000270617	human	ensembl	74_37	+1	known	missense	c.52	p.G18R	0.453	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF473	HGNC	ENSG00000142528				183	0	0	85	26	23.4234
SHANK1	0	genome.wustl.edu	37	19	51172384	51172384	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	51172384	51172384	G	T	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	missense	c.2857	p.L953I	1.000	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681				8	0	0	5	11	68.75
SHANK1	0	genome.wustl.edu	37	19	51215284	51215284	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	51215284	51215284	G	A	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	missense	c.880	p.P294S	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681				98	0	0	47	48	50.5263
ZNF613	0	genome.wustl.edu	37	19	52448330	52448330	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	52448330	52448330	A	C	SNP	ZNF613	ENST00000293471	human	ensembl	74_37	+1	known	missense	c.1194	p.K398N	0.970	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF613	HGNC	ENSG00000176024				62	0	0	40	15	27.2727
ZNF615	0	genome.wustl.edu	37	19	52497205	52497205	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	52497205	52497205	T	G	SNP	ZNF615	ENST00000594083	human	ensembl	74_37	-1	known	missense	c.1157	p.N386T	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF615	HGNC	ENSG00000197619				104	0	0	35	21	37.5
ZNF845	0	genome.wustl.edu	37	19	53856407	53856407	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	53856407	53856407	G	A	SNP	ZNF845	ENST00000458035	human	ensembl	74_37	+1	known	missense	c.2479	p.G827R	0.740	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF845	HGNC	ENSG00000213799				49	0	0	52	4	7.14286
RPS9	0	genome.wustl.edu	37	19	54711410	54711410	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	54711410	54711410	G	T	SNP	RPS9	ENST00000302907	human	ensembl	74_37	+1	known	silent	c.552	p.G184	0.962	NULL	pfam_Ribosomal_S4/S9_N,pfam_S4_RNA-bd,smart_S4_RNA-bd,pfscan_S4_RNA-bd,tigrfam_Ribosomal_S4/S9_euk/arc	-	no_errors	RPS9	HGNC	ENSG00000170889				39	0	0	22	15	40.5405
LILRB3	0	genome.wustl.edu	37	19	54746018	54746018	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	54746018	54746018	T	G	SNP	LILRB3	ENST00000407860	human	ensembl	74_37	-1	known	missense	c.239	p.K80T	0.006	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB3	HGNC	ENSG00000204577				504	0	0	294	105	26.3158
TTYH1	0	genome.wustl.edu	37	19	54930326	54930326	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	54930326	54930326	G	A	SNP	TTYH1	ENST00000376531	human	ensembl	74_37	+1	known	missense	c.151	p.A51T	0.991	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH1	HGNC	ENSG00000167614				217	0	0	86	48	35.8209
LAIR2	0	genome.wustl.edu	37	19	55020282	55020282	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	55020282	55020282	C	T	SNP	LAIR2	ENST00000301202	human	ensembl	74_37	+1	known	silent	c.402	p.P134	0.000	NULL	smart_Ig_sub	-	no_errors	LAIR2	HGNC	ENSG00000167618				62	0	0	25	17	40.4762
NLRP7	0	genome.wustl.edu	37	19	55447772	55447772	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	55447772	55447772	C	T	SNP	NLRP7	ENST00000446217	human	ensembl	74_37	-1	known	silent	c.2241	p.A747	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634				65	0	0	29	25	46.2963
ZNF628	0	genome.wustl.edu	37	19	55992708	55992708	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	55992708	55992708	C	T	SNP	ZNF628	ENST00000598519	human	ensembl	74_37	+1	known	missense	c.148	p.R50W	0.227	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF628	HGNC	ENSG00000197483				29	0	0	39	4	9.30233
CCDC106	0	genome.wustl.edu	37	19	56163920	56163920	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	56163920	56163920	G	A	SNP	CCDC106	ENST00000308964	human	ensembl	74_37	+1	known	silent	c.651	p.T217	0.908	NULL	NULL	-	no_errors	CCDC106	HGNC	ENSG00000173581				74	0	0	59	30	33.7079
U2AF2	0	genome.wustl.edu	37	19	56179935	56179935	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	56179935	56179935	T	C	SNP	U2AF2	ENST00000308924	human	ensembl	74_37	+1	known	missense	c.805	p.Y269H	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_U2AF_lg	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_U2AF_lg	-	no_errors	U2AF2	HGNC	ENSG00000063244				59	0	0	36	11	23.4043
NLRP9	0	genome.wustl.edu	37	19	56243791	56243791	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	56243791	56243791	G	A	SNP	NLRP9	ENST00000332836	human	ensembl	74_37	-1	known	missense	c.1406	p.A469V	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792				186	0	0	145	9	5.84416
ZNF787	0	genome.wustl.edu	37	19	56600306	56600306	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	56600306	56600306	A	G	SNP	ZNF787	ENST00000270459	human	ensembl	74_37	-1	known	missense	c.235	p.S79P	0.579	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF787	HGNC	ENSG00000142409				27	0	0	26	2	7.14286
LONP1	0	genome.wustl.edu	37	19	5700808	5700808	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	5700808	5700808	G	A	SNP	LONP1	ENST00000360614	human	ensembl	74_37	-1	known	missense	c.1498	p.R500C	1.000	pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Prk_AAA_dom,superfamily_P-loop_NTPase,tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Prk_AAA_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP1	HGNC	ENSG00000196365				96	0	0	39	35	47.2973
ZNF71	0	genome.wustl.edu	37	19	57133202	57133202	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	57133202	57133202	G	A	SNP	ZNF71	ENST00000328070	human	ensembl	74_37	+1	known	missense	c.547	p.E183K	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF71	HGNC	ENSG00000197951				73	0	0	51	28	35.443
ZNF835	0	genome.wustl.edu	37	19	57175364	57175364	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	57175364	57175364	G	A	SNP	ZNF835	ENST00000537055	human	ensembl	74_37	-1	known	silent	c.1203	p.H401	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF835	HGNC	ENSG00000127903				51	0	0	41	30	42.2535
ZNF835	0	genome.wustl.edu	37	19	57175366	57175366	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	57175366	57175366	G	T	SNP	ZNF835	ENST00000537055	human	ensembl	74_37	-1	known	missense	c.1201	p.H401N	0.323	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF835	HGNC	ENSG00000127903				52	0	0	42	29	40.8451
ZIM2	0	genome.wustl.edu	37	19	57286338	57286338	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	57286338	57286338	A	G	SNP	ZIM2	ENST00000221722	human	ensembl	74_37	-1	known	silent	c.1302	p.H434	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZIM2	HGNC	ENSG00000269699				58	0	0	32	23	41.8182
AURKC	0	genome.wustl.edu	37	19	57743435	57743435	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	57743435	57743435	C	T	SNP	AURKC	ENST00000302804	human	ensembl	74_37	+1	known	missense	c.139	p.R47C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AURKC	HGNC	ENSG00000105146				67	0	0	37	10	21.2766
ZNF460	0	genome.wustl.edu	37	19	57803526	57803526	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	57803526	57803526	G	A	SNP	ZNF460	ENST00000360338	human	ensembl	74_37	+1	known	silent	c.1617	p.T539	0.083	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF460	HGNC	ENSG00000197714				104	0	0	91	7	7.14286
ZNF814	0	genome.wustl.edu	37	19	58385546	58385546	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	58385546	58385546	G	T	SNP	ZNF814	ENST00000435989	human	ensembl	74_37	-1	known	missense	c.1212	p.D404E	0.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF814	HGNC	ENSG00000204514				13	0	0	15	6	28.5714
ZNF814	0	genome.wustl.edu	37	19	58385591	58385591	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	58385591	58385591	A	C	SNP	ZNF814	ENST00000435989	human	ensembl	74_37	-1	known	missense	c.1167	p.F389L	0.289	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF814	HGNC	ENSG00000204514				15	0	0	20	6	23.0769
POLRMT	0	genome.wustl.edu	37	19	629979	629979	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	629979	629979	T	G	SNP	POLRMT	ENST00000588649	human	ensembl	74_37	-1	known	missense	c.383	p.K128T	0.001	NULL	pfam_DNA-dir_Rpol_phage-type	-	no_errors	POLRMT	HGNC	ENSG00000099821				92	0	0	48	14	22.5806
TUBB4A	0	genome.wustl.edu	37	19	6496155	6496155	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	6496155	6496155	C	T	SNP	TUBB4A	ENST00000264071	human	ensembl	74_37	-1	known	missense	c.355	p.V119I	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Alpha_tubulin,prints_Gamma_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Alpha_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin	-	no_errors	TUBB4A	HGNC	ENSG00000104833				96	0	0	77	45	36.8852
CAMSAP3	0	genome.wustl.edu	37	19	7676636	7676636	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	7676636	7676636	C	T	SNP	CAMSAP3	ENST00000446248	human	ensembl	74_37	+1	known	silent	c.1338	p.V446	0.993	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826				29	0	0	28	4	12.5
CAMSAP3	0	genome.wustl.edu	37	19	7677715	7677715	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	7677715	7677715	G	A	SNP	CAMSAP3	ENST00000446248	human	ensembl	74_37	+1	known	missense	c.2417	p.R806H	0.542	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826				16	0	0	8	9	52.9412
XAB2	0	genome.wustl.edu	37	19	7692277	7692277	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	7692277	7692277	C	T	SNP	XAB2	ENST00000358368	human	ensembl	74_37	-1	known	missense	c.374	p.R125H	0.172	smart_HAT	smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	XAB2	HGNC	ENSG00000076924				18	0	0	9	12	57.1429
FBN3	0	genome.wustl.edu	37	19	8154554	8154554	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	8154554	8154554	T	C	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	missense	c.6251	p.D2084G	1.000	pfam_EGF-like_Ca-bd_dom,superfamily_TB_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449				174	0	0	182	16	8.08081
PRAM1	0	genome.wustl.edu	37	19	8563150	8563150	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	8563150	8563150	C	T	SNP	PRAM1	ENST00000423345	human	ensembl	74_37	-1	known	missense	c.1456	p.A486T	0.000	NULL	superfamily_SH3_domain	-	no_errors	PRAM1	HGNC	ENSG00000133246				49	0	0	15	6	28.5714
MYO1F	0	genome.wustl.edu	37	19	8609190	8609190	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	8609190	8609190	G	A	SNP	MYO1F	ENST00000338257	human	ensembl	74_37	-1	known	silent	c.1515	p.Y505	0.993	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain	-	no_errors	MYO1F	HGNC	ENSG00000142347				148	0	0	60	39	39.3939
ZNF317	0	genome.wustl.edu	37	19	9272026	9272026	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	9272026	9272026	G	A	SNP	ZNF317	ENST00000247956	human	ensembl	74_37	+1	known	missense	c.1705	p.D569N	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF317	HGNC	ENSG00000130803				88	0	0	57	35	38.0435
ARID3A	0	genome.wustl.edu	37	19	971952	971952	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	971952	971952	A	G	SNP	ARID3A	ENST00000263620	human	ensembl	74_37	+1	known	missense	c.1669	p.S557G	0.000	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3A	HGNC	ENSG00000116017				52	0	0	46	4	8
TBC1D8	0	genome.wustl.edu	37	2	101644789	101644789	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	101644789	101644789	C	T	SNP	TBC1D8	ENST00000409318	human	ensembl	74_37	-1	known	silent	c.2328	p.S776	0.007	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8	HGNC	ENSG00000204634				49	0	0	35	17	32.6923
IL1R2	0	genome.wustl.edu	37	2	102626108	102626108	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	102626108	102626108	C	A	SNP	IL1R2	ENST00000332549	human	ensembl	74_37	+1	known	missense	c.152	p.P51H	0.961	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_IL-1_rcpt_I/II-typ	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_IL-1_rcpt_II-typ,prints_IL-1_rcpt_I/II-typ	-	no_errors	IL1R2	HGNC	ENSG00000115590				292	1	0.341297	134	91	40.4444
SLC9A4	0	genome.wustl.edu	37	2	103095324	103095324	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	103095324	103095324	G	T	SNP	SLC9A4	ENST00000295269	human	ensembl	74_37	+1	known	missense	c.283	p.G95C	0.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251				81	0	0	62	4	6.06061
GPR45	0	genome.wustl.edu	37	2	105858772	105858772	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	105858772	105858772	G	A	SNP	GPR45	ENST00000258456	human	ensembl	74_37	+1	known	missense	c.457	p.A153T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR45	HGNC	ENSG00000135973				38	0	0	33	26	44.0678
SULT1C4	0	genome.wustl.edu	37	2	108994925	108994925	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	108994925	108994925	G	T	SNP	SULT1C4	ENST00000272452	human	ensembl	74_37	+1	known	missense	c.132	p.K44N	1.000	superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT1C4	HGNC	ENSG00000198075				191	1	0.520833	148	17	10.303
LPIN1	0	genome.wustl.edu	37	2	11922594	11922594	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	11922594	11922594	C	A	SNP	LPIN1	ENST00000449576	human	ensembl	74_37	+1	known	missense	c.1372	p.Q458K	0.022	NULL	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,superfamily_WD40_repeat_dom,smart_LNS2	-	no_errors	LPIN1	HGNC	ENSG00000134324				80	0	0	66	15	18.5185
SMPD4	0	genome.wustl.edu	37	2	130929950	130929950	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	130929950	130929950	C	T	SNP	SMPD4	ENST00000409031	human	ensembl	74_37	-1	known	missense	c.748	p.G250R	0.956	NULL	NULL	-	no_errors	SMPD4	HGNC	ENSG00000136699				41	0	0	32	8	20
PTPN18	0	genome.wustl.edu	37	2	131117217	131117217	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	131117217	131117217	C	T	SNP	PTPN18	ENST00000175756	human	ensembl	74_37	+1	known	missense	c.412	p.R138W	0.884	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN18	HGNC	ENSG00000072135				72	0	0	31	9	22.5
POTEJ	0	genome.wustl.edu	37	2	131414456	131414456	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	131414456	131414456	G	A	SNP	POTEJ	ENST00000409602	human	ensembl	74_37	+1	novel	missense	c.2123	p.G708E	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEJ	HGNC	ENSG00000222038				122	0	0	61	50	45.045
POTEJ	0	genome.wustl.edu	37	2	131414975	131414975	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	131414975	131414975	A	T	SNP	POTEJ	ENST00000409602	human	ensembl	74_37	+1	novel	missense	c.2642	p.Y881F	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEJ	HGNC	ENSG00000222038				108	1	0.917431	116	37	24.183
ARHGEF4	0	genome.wustl.edu	37	2	131801095	131801095	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	131801095	131801095	A	G	SNP	ARHGEF4	ENST00000326016	human	ensembl	74_37	+1	known	missense	c.1538	p.Q513R	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF4	HGNC	ENSG00000136002				122	0	0	85	5	5.55556
MCM6	0	genome.wustl.edu	37	2	136614396	136614396	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	136614396	136614396	A	G	SNP	MCM6	ENST00000264156	human	ensembl	74_37	-1	known	missense	c.1528	p.Y510H	1.000	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM6,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM6	HGNC	ENSG00000076003				68	0	0	52	13	20
LRP1B	0	genome.wustl.edu	37	2	141660583	141660583	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	141660583	141660583	G	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.3672	p.C1224	1.000	smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				66	0	0	56	4	6.66667
LYPD6	0	genome.wustl.edu	37	2	150294262	150294262	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	150294262	150294262	A	C	SNP	LYPD6	ENST00000334166	human	ensembl	74_37	+1	known	missense	c.40	p.S14R	1.000	NULL	pfam_LY6_UPAR	-	no_errors	LYPD6	HGNC	ENSG00000187123				74	0	0	43	28	39.4366
NEB	0	genome.wustl.edu	37	2	152482131	152482131	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	152482131	152482131	C	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.10369	p.D3457N	1.000	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				42	0	0	13	8	38.0952
NEB	0	genome.wustl.edu	37	2	152497119	152497119	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	152497119	152497119	C	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.8435	p.R2812H	0.684	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				221	0	0	190	120	38.7097
ARL6IP6	0	genome.wustl.edu	37	2	153575445	153575445	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	153575445	153575445	C	T	SNP	ARL6IP6	ENST00000326446	human	ensembl	74_37	+1	known	missense	c.307	p.R103W	0.905	NULL	NULL	-	no_errors	ARL6IP6	HGNC	ENSG00000177917				79	0	0	44	11	20
TANC1	0	genome.wustl.edu	37	2	160027229	160027229	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	160027229	160027229	G	A	SNP	TANC1	ENST00000263635	human	ensembl	74_37	+1	known	missense	c.1264	p.A422T	1.000	superfamily_P-loop_NTPase	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC1	HGNC	ENSG00000115183				106	0	0	80	21	20.7921
ITGB6	0	genome.wustl.edu	37	2	161051958	161051958	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	161051958	161051958	A	G	SNP	ITGB6	ENST00000283249	human	ensembl	74_37	-1	known	missense	c.515	p.L172P	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N,prints_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB6	HGNC	ENSG00000115221				92	0	0	51	21	29.1667
SLC4A10	0	genome.wustl.edu	37	2	162760684	162760684	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	162760684	162760684	G	A	SNP	SLC4A10	ENST00000446997	human	ensembl	74_37	+1	known	missense	c.1613	p.R538H	1.000	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A10	HGNC	ENSG00000144290				23	0	0	8	6	42.8571
KCNH7	0	genome.wustl.edu	37	2	163279956	163279956	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	163279956	163279956	G	A	SNP	KCNH7	ENST00000332142	human	ensembl	74_37	-1	known	nonsense	c.2044	p.R682*	0.985	superfamily_cNMP-bd-like	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,tigrfam_PAS	-	no_errors	KCNH7	HGNC	ENSG00000184611				172	0	0	108	13	10.7438
FIGN	0	genome.wustl.edu	37	2	164466809	164466809	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	164466809	164466809	C	T	SNP	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	silent	c.1533	p.A511	0.846	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263				108	0	0	66	15	18.5185
PXDN	0	genome.wustl.edu	37	2	1652519	1652519	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	1652519	1652519	G	A	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	silent	c.3033	p.G1011	0.057	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508				16	0	0	9	6	40
SCN7A	0	genome.wustl.edu	37	2	167318977	167318977	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	167318977	167318977	A	C	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	missense	c.1005	p.N335K	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546				27	0	0	16	7	30.4348
FASTKD1	0	genome.wustl.edu	37	2	170416934	170416934	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	170416934	170416934	C	T	SNP	FASTKD1	ENST00000453153	human	ensembl	74_37	-1	known	missense	c.934	p.A312T	0.000	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD1	HGNC	ENSG00000138399				142	0	0	67	28	29.4737
ENSG00000268241	0	genome.wustl.edu	37	2	175201908	175201908	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	175201908	175201908	C	T	SNP	ENSG00000268241	ENST00000595354	human	ensembl	74_37	-1	known	missense	c.244	p.V82I	1.000	NULL	NULL	-	no_errors	AC018470.1	Clone_based_ensembl_gene	ENSG00000268241				24	0	0	16	9	36
GPR155	0	genome.wustl.edu	37	2	175318565	175318565	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	175318565	175318565	G	A	SNP	GPR155	ENST00000295500	human	ensembl	74_37	-1	known	silent	c.1776	p.C592	1.000	NULL	pfam_Auxin_eff,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	GPR155	HGNC	ENSG00000163328				132	0	0	57	43	43
HOXD13	0	genome.wustl.edu	37	2	176958067	176958067	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	176958067	176958067	C	T	SNP	HOXD13	ENST00000392539	human	ensembl	74_37	+1	putative	missense	c.449	p.A150V	0.994	pfam_HoxA13_N	pfam_Homeobox_dom,pfam_HoxA13_N,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOXD13	HGNC	ENSG00000128714				56	0	0	33	20	37.7358
HOXD4	0	genome.wustl.edu	37	2	177016573	177016573	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	177016573	177016573	C	T	SNP	HOXD4	ENST00000306324	human	ensembl	74_37	+1	known	missense	c.212	p.S71L	0.997	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXD4	HGNC	ENSG00000170166				13	0	0	12	7	36.8421
TTN	0	genome.wustl.edu	37	2	179421600	179421600	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	179421600	179421600	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.80577	p.G26859	0.970	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				62	0	0	28	14	33.3333
TTN	0	genome.wustl.edu	37	2	179474580	179474580	+	Silent	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	179474580	179474580	A	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.43866	p.G14622	0.998	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				458	3	0.650759	276	19	6.44068
TTN	0	genome.wustl.edu	37	2	179485026	179485026	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	179485026	179485026	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.38518	p.A12840T	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				111	0	0	57	32	35.9551
TTN	0	genome.wustl.edu	37	2	179583661	179583661	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	179583661	179583661	A	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.20534	p.V6845G	0.997	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				20	0	0	25	3	10.7143
TTN	0	genome.wustl.edu	37	2	179637974	179637974	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	179637974	179637974	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.7717	p.K2573E	0.981	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				34	0	0	25	7	21.875
KCNS3	0	genome.wustl.edu	37	2	18112978	18112978	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	18112978	18112978	G	A	SNP	KCNS3	ENST00000304101	human	ensembl	74_37	+1	known	missense	c.703	p.G235R	0.043	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv2	-	no_errors	KCNS3	HGNC	ENSG00000170745				161	0	0	58	47	44.7619
ITGA4	0	genome.wustl.edu	37	2	182339713	182339713	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	182339713	182339713	A	G	SNP	ITGA4	ENST00000397033	human	ensembl	74_37	+1	known	missense	c.346	p.K116E	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA4	HGNC	ENSG00000115232				53	0	0	49	11	18.3333
NEUROD1	0	genome.wustl.edu	37	2	182543576	182543576	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	182543576	182543576	C	T	SNP	NEUROD1	ENST00000295108	human	ensembl	74_37	-1	known	silent	c.12	p.S4	0.074	pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD1	HGNC	ENSG00000162992				90	0	0	40	23	36.5079
NCKAP1	0	genome.wustl.edu	37	2	183829478	183829478	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	183829478	183829478	A	G	SNP	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	missense	c.1705	p.S569P	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1	-	no_errors	NCKAP1	HGNC	ENSG00000061676				54	0	0	18	13	41.9355
ITGAV	0	genome.wustl.edu	37	2	187501806	187501806	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	187501806	187501806	G	A	SNP	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	missense	c.772	p.V258I	1.000	pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448				131	0	0	55	32	36.7816
COL5A2	0	genome.wustl.edu	37	2	189927992	189927992	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	189927992	189927992	G	A	SNP	COL5A2	ENST00000374866	human	ensembl	74_37	-1	known	missense	c.1775	p.A592V	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL5A2	HGNC	ENSG00000204262				124	0	0	51	32	38.5542
ASNSD1	0	genome.wustl.edu	37	2	190531821	190531821	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	190531821	190531821	T	C	SNP	ASNSD1	ENST00000260952	human	ensembl	74_37	+1	known	silent	c.963	p.N321	0.037	pfam_Asn_synthase	pfam_Asn_synthase	-	no_errors	ASNSD1	HGNC	ENSG00000138381				270	0	0	158	9	5.38922
MYT1L	0	genome.wustl.edu	37	2	1906994	1906994	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	1906994	1906994	C	T	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	silent	c.1890	p.P630	0.924	pfam_Myelin_TF	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487				50	0	0	29	14	32.5581
DNAH7	0	genome.wustl.edu	37	2	196837015	196837015	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	196837015	196837015	T	A	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.2009	p.H670L	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997				74	0	0	46	12	20.6897
AOX1	0	genome.wustl.edu	37	2	201501717	201501717	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	201501717	201501717	G	A	SNP	AOX1	ENST00000374700	human	ensembl	74_37	+1	known	silent	c.2430	p.K810	0.888	pfam_AldOxase/xan_DH_Mopterin-bd,superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Aldehyde_oxidase	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Aldehyde_oxidase	-	no_errors	AOX1	HGNC	ENSG00000138356				101	1	0.980392	66	4	5.71429
BZW1	0	genome.wustl.edu	37	2	201683103	201683103	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	201683103	201683103	A	G	SNP	BZW1	ENST00000409600	human	ensembl	74_37	+1	known	missense	c.806	p.D269G	1.000	superfamily_ARM-type_fold	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	-	no_errors	BZW1	HGNC	ENSG00000082153				48	0	0	27	10	27.027
FAM126B	0	genome.wustl.edu	37	2	201862260	201862260	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	201862260	201862260	A	G	SNP	FAM126B	ENST00000418596	human	ensembl	74_37	-1	known	silent	c.534	p.F178	1.000	pfam_Hyccin	pfam_Hyccin	-	no_errors	FAM126B	HGNC	ENSG00000155744				61	0	0	37	10	21.2766
CFLAR	0	genome.wustl.edu	37	2	202025304	202025304	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	202025304	202025304	C	A	SNP	CFLAR	ENST00000309955	human	ensembl	74_37	+1	known	silent	c.943	p.R315	1.000	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_ICE_p20	pfam_DED,pfam_Pept_C14_caspase,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_ICE_p20	-	no_errors	CFLAR	HGNC	ENSG00000003402				165	0	0	91	60	39.7351
CDK15	0	genome.wustl.edu	37	2	202737024	202737024	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	202737024	202737024	C	T	SNP	CDK15	ENST00000374598	human	ensembl	74_37	+1	known	nonsense	c.1033	p.R345*	0.016	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK15	HGNC	ENSG00000138395				118	0	0	56	15	21.1268
NDUFS1	0	genome.wustl.edu	37	2	207008754	207008754	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	207008754	207008754	G	A	SNP	NDUFS1	ENST00000455934	human	ensembl	74_37	-1	known	silent	c.1017	p.R339	0.991	pfam_Mopterin_OxRdtase,tigrfam_NADH_UbQ_OxRdtase_Gsu	pfam_Mopterin_OxRdtase,pfam_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfam_NuoG_C,pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,smart_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfscan_2Fe-2S_ferredoxin-type,tigrfam_NADH_UbQ_OxRdtase_Gsu	-	no_errors	NDUFS1	HGNC	ENSG00000023228				91	0	0	18	9	33.3333
EEF1B2	0	genome.wustl.edu	37	2	207027581	207027581	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	207027581	207027581	G	A	SNP	EEF1B2	ENST00000236957	human	ensembl	74_37	+1	known	missense	c.652	p.D218N	1.000	pfam_Transl_elong_fac_EF1B_bsu/dsu,superfamily_Transl_elong_fac_EF1B_bsu/dsu,smart_Transl_elong_fac_EF1B_bsu/dsu	pfam_Transl_elong_fac_EF1B_bsu/dsu,pfam_EF-1_beta_acid_region_euk,superfamily_Transl_elong_fac_EF1B_bsu/dsu,superfamily_Glutathione-S-Trfase_C-like,smart_Transl_elong_fac_EF1B_bsu/dsu	-	no_errors	EEF1B2	HGNC	ENSG00000114942				61	0	0	39	7	15.2174
CPS1	0	genome.wustl.edu	37	2	211512694	211512694	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	211512694	211512694	C	T	SNP	CPS1	ENST00000430249	human	ensembl	74_37	+1	known	silent	c.3267	p.I1089	0.094	pfam_CarbamoylP_synth_lsu_N,superfamily_PreATP-grasp_dom,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_CarbamoylP_synth_lsu_oligo,pfam_GATASE,pfam_CarbamoylP_synth_lsu_N,pfam_MGS-like_dom,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu	-	no_errors	CPS1	HGNC	ENSG00000021826				122	0	0	52	19	26.7606
ERBB4	0	genome.wustl.edu	37	2	212426654	212426654	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	212426654	212426654	G	T	SNP	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	missense	c.2461	p.L821I	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568				139	0	0	65	20	23.5294
SPAG16	0	genome.wustl.edu	37	2	214727247	214727247	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	214727247	214727247	G	A	SNP	SPAG16	ENST00000331683	human	ensembl	74_37	+1	known	missense	c.1109	p.C370Y	0.566	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SPAG16	HGNC	ENSG00000144451				101	0	0	52	30	36.5854
RNF25	0	genome.wustl.edu	37	2	219530916	219530916	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	219530916	219530916	T	C	SNP	RNF25	ENST00000295704	human	ensembl	74_37	-1	known	missense	c.395	p.H132R	1.000	superfamily_UBQ-conjugating_enzyme/RWD	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,smart_Znf_RING,pfscan_RWD-domain,pfscan_Znf_RING	-	no_errors	RNF25	HGNC	ENSG00000163481				35	0	0	25	9	26.4706
PRKAG3	0	genome.wustl.edu	37	2	219688557	219688557	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	219688557	219688557	G	A	SNP	PRKAG3	ENST00000233944	human	ensembl	74_37	-1	known	silent	c.1398	p.G466	0.777	pfam_CBS_dom,smart_CBS_dom	pfam_CBS_dom,smart_CBS_dom	-	no_errors	PRKAG3	HGNC	ENSG00000115592				125	0	0	117	7	5.64516
WNT6	0	genome.wustl.edu	37	2	219736502	219736502	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	219736502	219736502	C	T	SNP	WNT6	ENST00000233948	human	ensembl	74_37	+1	known	silent	c.597	p.R199	0.027	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt6	-	no_errors	WNT6	HGNC	ENSG00000115596				27	0	0	14	14	50
WNT6	0	genome.wustl.edu	37	2	219738385	219738385	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	219738385	219738385	C	T	SNP	WNT6	ENST00000233948	human	ensembl	74_37	+1	known	missense	c.916	p.R306C	0.999	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt6	-	no_errors	WNT6	HGNC	ENSG00000115596				12	0	0	8	7	46.6667
CDK5R2	0	genome.wustl.edu	37	2	219824884	219824884	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	219824884	219824884	C	T	SNP	CDK5R2	ENST00000302625	human	ensembl	74_37	+1	known	silent	c.342	p.G114	0.981	pfam_CDK5_activator,pirsf_CDK5_activator	pfam_CDK5_activator,superfamily_Cyclin-like,pirsf_CDK5_activator	-	no_errors	CDK5R2	HGNC	ENSG00000171450				12	0	0	17	11	39.2857
CCDC108	0	genome.wustl.edu	37	2	219900328	219900328	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	219900328	219900328	T	C	SNP	CCDC108	ENST00000341552	human	ensembl	74_37	-1	known	missense	c.416	p.K139R	0.988	NULL	superfamily_PapD-like,pfscan_MSP_dom	-	no_errors	CCDC108	HGNC	ENSG00000181378				126	0	0	77	7	8.33333
ATG9A	0	genome.wustl.edu	37	2	220089143	220089143	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	220089143	220089143	G	A	SNP	ATG9A	ENST00000361242	human	ensembl	74_37	-1	known	missense	c.950	p.A317V	0.389	pfam_Autophagy-rel_prot_9,superfamily_Cyt_c_oxidase_su3	pfam_Autophagy-rel_prot_9,superfamily_Cyt_c_oxidase_su3	-	no_errors	ATG9A	HGNC	ENSG00000198925				44	0	0	51	6	10.5263
SPEG	0	genome.wustl.edu	37	2	220333585	220333585	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	220333585	220333585	C	T	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	silent	c.3306	p.C1102	0.001	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195				31	0	0	20	16	44.4444
IRS1	0	genome.wustl.edu	37	2	227662263	227662263	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	227662263	227662263	T	C	SNP	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	missense	c.1192	p.S398G	1.000	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047				102	0	0	134	9	6.29371
C2orf83	0	genome.wustl.edu	37	2	228476166	228476166	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	228476166	228476166	T	C	SNP	C2orf83	ENST00000264387	human	ensembl	74_37	-1	known	missense	c.397	p.K133E	0.008	NULL	pfam_Folate_carrier	-	no_errors	C2orf83	HGNC	ENSG00000042304				138	0	0	60	42	41.1765
DIS3L2	0	genome.wustl.edu	37	2	233194563	233194563	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	233194563	233194563	G	T	SNP	DIS3L2	ENST00000325385	human	ensembl	74_37	+1	known	missense	c.1780	p.A594S	1.000	NULL	NULL	-	no_errors	DIS3L2	HGNC	ENSG00000144535				31	0	0	15	10	40
ECEL1	0	genome.wustl.edu	37	2	233347838	233347838	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	233347838	233347838	C	T	SNP	ECEL1	ENST00000304546	human	ensembl	74_37	-1	known	missense	c.1558	p.D520N	1.000	NULL	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	ECEL1	HGNC	ENSG00000171551				17	0	0	21	11	34.375
SAG	0	genome.wustl.edu	37	2	234240330	234240330	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	234240330	234240330	G	A	SNP	SAG	ENST00000409110	human	ensembl	74_37	+1	known	missense	c.778	p.V260I	0.993	pfam_Arrestin_C-like,superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set,prints_Arrestin	-	no_errors	SAG	HGNC	ENSG00000130561				29	0	0	15	13	46.4286
UGT1A4	0	genome.wustl.edu	37	2	234627686	234627686	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	234627686	234627686	T	A	SNP	UGT1A4	ENST00000373409	human	ensembl	74_37	+1	known	missense	c.220	p.F74I	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A4	HGNC	ENSG00000244474				72	0	0	61	4	6.15385
AGAP1	0	genome.wustl.edu	37	2	236839450	236839450	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	236839450	236839450	A	G	SNP	AGAP1	ENST00000304032	human	ensembl	74_37	+1	known	missense	c.1366	p.I456V	0.941	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP1	HGNC	ENSG00000157985				77	0	0	43	19	30.6452
HDAC4	0	genome.wustl.edu	37	2	240061463	240061463	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	240061463	240061463	C	T	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	missense	c.895	p.G299R	0.986	pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024				132	0	0	75	25	25
KIF1A	0	genome.wustl.edu	37	2	241676582	241676582	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	241676582	241676582	C	T	SNP	KIF1A	ENST00000498729	human	ensembl	74_37	-1	known	missense	c.3905	p.R1302H	1.000	pfam_Kinesin-like	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1A	HGNC	ENSG00000130294				148	0	0	73	44	37.6068
PASK	0	genome.wustl.edu	37	2	242054701	242054701	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	242054701	242054701	A	G	SNP	PASK	ENST00000358649	human	ensembl	74_37	-1	known	splice_site	c.3198+2	e12+2	0.998	-	-	-	no_errors	PASK	HGNC	ENSG00000115687				137	1	0.724638	52	15	22.3881
THAP4	0	genome.wustl.edu	37	2	242572918	242572918	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	242572918	242572918	C	T	SNP	THAP4	ENST00000407315	human	ensembl	74_37	-1	known	missense	c.654	p.M218I	0.139	NULL	pfam_DUF1794,pfam_Znf_C2CH,superfamily_Calycin-like,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP4	HGNC	ENSG00000176946				141	0	0	69	43	38.3929
THAP4	0	genome.wustl.edu	37	2	242572945	242572945	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	242572945	242572945	G	A	SNP	THAP4	ENST00000407315	human	ensembl	74_37	-1	known	silent	c.627	p.G209	0.000	NULL	pfam_DUF1794,pfam_Znf_C2CH,superfamily_Calycin-like,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP4	HGNC	ENSG00000176946				175	0	0	113	11	8.87097
D2HGDH	0	genome.wustl.edu	37	2	242680464	242680464	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	242680464	242680464	G	A	SNP	D2HGDH	ENST00000321264	human	ensembl	74_37	+1	known	silent	c.309	p.L103	1.000	pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2	pfam_FAD-linked_oxidase_C,pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2,superfamily_FAD-linked_Oxase-like_C	-	no_errors	D2HGDH	HGNC	ENSG00000180902				39	0	0	21	10	32.2581
CXXC11	0	genome.wustl.edu	37	2	242814647	242814647	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	242814647	242814647	G	T	SNP	CXXC11	ENST00000343216	human	ensembl	74_37	+1	known	missense	c.940	p.G314C	0.003	NULL	NULL	-	no_errors	CXXC11	HGNC	ENSG00000188011				96	0	0	59	4	6.34921
ADCY3	0	genome.wustl.edu	37	2	25141233	25141233	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	25141233	25141233	G	A	SNP	ADCY3	ENST00000260600	human	ensembl	74_37	-1	known	silent	c.624	p.T208	0.056	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY3	HGNC	ENSG00000138031				77	0	0	53	4	7.01754
KIF3C	0	genome.wustl.edu	37	2	26152924	26152924	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	26152924	26152924	C	T	SNP	KIF3C	ENST00000264712	human	ensembl	74_37	-1	known	missense	c.2015	p.S672N	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3C	HGNC	ENSG00000084731				127	0	0	75	24	24.2424
KIF3C	0	genome.wustl.edu	37	2	26204576	26204576	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	26204576	26204576	C	T	SNP	KIF3C	ENST00000264712	human	ensembl	74_37	-1	known	missense	c.211	p.A71T	0.799	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3C	HGNC	ENSG00000084731				172	0	0	142	12	7.79221
DPYSL5	0	genome.wustl.edu	37	2	27121530	27121530	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	27121530	27121530	G	T	SNP	DPYSL5	ENST00000288699	human	ensembl	74_37	+1	known	nonsense	c.163	p.G55*	0.999	superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL5	HGNC	ENSG00000157851				61	0	0	46	25	35.2113
C2orf53	0	genome.wustl.edu	37	2	27361028	27361028	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	27361028	27361028	C	T	SNP	C2orf53	ENST00000335524	human	ensembl	74_37	-1	known	missense	c.170	p.R57H	0.000	NULL	NULL	-	no_errors	C2orf53	HGNC	ENSG00000186143				32	0	0	28	12	30
FOSL2	0	genome.wustl.edu	37	2	28631707	28631707	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	28631707	28631707	C	T	SNP	FOSL2	ENST00000264716	human	ensembl	74_37	+1	known	missense	c.436	p.R146W	1.000	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	FOSL2	HGNC	ENSG00000075426				28	0	0	20	7	25.9259
XDH	0	genome.wustl.edu	37	2	31589790	31589790	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	31589790	31589790	G	A	SNP	XDH	ENST00000379416	human	ensembl	74_37	-1	known	silent	c.2268	p.G756	0.479	pfam_AldOxase/xan_DH_Mopterin-bd,superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125				129	0	0	121	7	5.46875
XDH	0	genome.wustl.edu	37	2	31625916	31625916	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	31625916	31625916	G	A	SNP	XDH	ENST00000379416	human	ensembl	74_37	-1	known	silent	c.195	p.I65	0.004	pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125				115	0	0	82	5	5.74713
LTBP1	0	genome.wustl.edu	37	2	33468789	33468789	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	33468789	33468789	G	A	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	missense	c.1937	p.G646D	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323				101	0	0	64	5	7.24638
LTBP1	0	genome.wustl.edu	37	2	33589401	33589401	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	33589401	33589401	T	C	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	silent	c.4521	p.C1507	0.518	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323				45	0	0	30	7	18.9189
CRIM1	0	genome.wustl.edu	37	2	36726453	36726453	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	36726453	36726453	C	T	SNP	CRIM1	ENST00000280527	human	ensembl	74_37	+1	known	silent	c.1464	p.R488	0.931	pfam_Antistasin-like,superfamily_Hirudin/antistatin	pfam_VWF_C,pfam_Antistasin-like,superfamily_Hirudin/antistatin,smart_IGFBP-like,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	-	no_errors	CRIM1	HGNC	ENSG00000150938				144	0	0	73	7	8.75
VIT	0	genome.wustl.edu	37	2	37035886	37035886	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	37035886	37035886	A	G	SNP	VIT	ENST00000379242	human	ensembl	74_37	+1	known	missense	c.1661	p.Y554C	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_LCCL,superfamily_LCCL,smart_LCCL,smart_VWF_A,pfscan_LCCL,pfscan_VWF_A	-	no_errors	VIT	HGNC	ENSG00000205221				98	0	0	62	20	24.3902
STRN	0	genome.wustl.edu	37	2	37076914	37076914	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	37076914	37076914	G	T	SNP	STRN	ENST00000263918	human	ensembl	74_37	-1	known	missense	c.2116	p.L706I	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Striatin_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	STRN	HGNC	ENSG00000115808				77	0	0	51	4	7.27273
SOCS5	0	genome.wustl.edu	37	2	46985744	46985744	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	46985744	46985744	C	T	SNP	SOCS5	ENST00000306503	human	ensembl	74_37	+1	known	silent	c.75	p.S25	0.992	NULL	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS5	HGNC	ENSG00000171150				70	0	0	36	23	38.9831
CCDC104	0	genome.wustl.edu	37	2	55746995	55746995	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	55746995	55746995	C	A	SNP	CCDC104	ENST00000339012	human	ensembl	74_37	+1	known	missense	c.58	p.L20M	1.000	pfam_ARF-like_2-bdp_dom	pfam_ARF-like_2-bdp_dom	-	no_errors	CCDC104	HGNC	ENSG00000163001				123	0	0	87	22	20.1835
RPS4XP5	0	genome.wustl.edu	37	2	63870744	63870744	+	RNA	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	63870744	63870744	T	C	SNP	RPS4XP5	ENST00000449995	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPS4XP5	HGNC	ENSG00000229920				14	0	0	13	5	27.7778
ADD2	0	genome.wustl.edu	37	2	70903966	70903966	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	70903966	70903966	G	A	SNP	ADD2	ENST00000264436	human	ensembl	74_37	-1	known	missense	c.1555	p.L519F	1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD2	HGNC	ENSG00000075340				108	0	0	74	5	6.32911
DYSF	0	genome.wustl.edu	37	2	71795421	71795421	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	71795421	71795421	G	A	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	silent	c.2856	p.S952	0.000	smart_Peroxin/Ferlin	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636				587	1	0.170068	318	157	33.0526
TET3	0	genome.wustl.edu	37	2	74327911	74327911	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	74327911	74327911	C	T	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	silent	c.3591	p.Y1197	0.950	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605				19	0	0	10	9	47.3684
DCTN1	0	genome.wustl.edu	37	2	74596303	74596303	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	74596303	74596303	A	G	SNP	DCTN1	ENST00000361874	human	ensembl	74_37	-1	known	silent	c.1623	p.S541	0.985	pfam_Dynactin,superfamily_P-loop_NTPase	pfam_Dynactin,pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Polyketide_synth_docking,superfamily_P-loop_NTPase,pfscan_CAP-Gly_domain	-	no_errors	DCTN1	HGNC	ENSG00000204843				58	0	0	55	12	17.9104
TTC31	0	genome.wustl.edu	37	2	74717792	74717792	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	74717792	74717792	C	T	SNP	TTC31	ENST00000442235	human	ensembl	74_37	+1	known	missense	c.40	p.R14C	0.152	NULL	NULL	-	no_errors	TTC31	HGNC	ENSG00000115282				23	0	0	10	12	54.5455
TRABD2A	0	genome.wustl.edu	37	2	85049040	85049040	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	85049040	85049040	G	A	SNP	TRABD2A	ENST00000479944	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TRABD2A	HGNC	ENSG00000186854				10	0	0	13	4	23.5294
MBOAT2	0	genome.wustl.edu	37	2	9017342	9017342	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	9017342	9017342	G	A	SNP	MBOAT2	ENST00000305997	human	ensembl	74_37	-1	known	missense	c.508	p.R170C	1.000	pfam_MBOAT_fam	pfam_MBOAT_fam,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MBOAT2	HGNC	ENSG00000143797				48	0	0	31	14	31.1111
FAHD2CP	0	genome.wustl.edu	37	2	96681040	96681040	+	RNA	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	96681040	96681040	C	A	SNP	FAHD2CP	ENST00000607780	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FAHD2CP	HGNC	ENSG00000231584				27	0	0	22	9	29.0323
SNRNP200	0	genome.wustl.edu	37	2	96940786	96940786	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	96940786	96940786	A	G	SNP	SNRNP200	ENST00000323853	human	ensembl	74_37	-1	known	silent	c.6375	p.D2125	0.926	smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SNRNP200	HGNC	ENSG00000144028				148	0	0	72	41	36.2832
KANSL3	0	genome.wustl.edu	37	2	97278221	97278221	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	97278221	97278221	G	A	SNP	KANSL3	ENST00000431828	human	ensembl	74_37	-1	known	missense	c.992	p.A331V	0.957	NULL	NULL	-	no_errors	KANSL3	HGNC	ENSG00000114982				202	0	0	122	12	8.95522
ANKEF1	0	genome.wustl.edu	37	20	10026254	10026254	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	10026254	10026254	C	T	SNP	ANKEF1	ENST00000378380	human	ensembl	74_37	+1	known	silent	c.729	p.D243	0.005	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EF_hand_dom,prints_Ankyrin_rpt	-	no_errors	ANKEF1	HGNC	ENSG00000132623				58	0	0	20	11	35.4839
SNRPB2	0	genome.wustl.edu	37	20	16712392	16712392	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	16712392	16712392	T	C	SNP	SNRPB2	ENST00000246071	human	ensembl	74_37	+1	known	silent	c.45	p.N15	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SNRPB2	HGNC	ENSG00000125870				110	0	0	29	21	42
CSRP2BP	0	genome.wustl.edu	37	20	18143317	18143317	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	18143317	18143317	G	A	SNP	CSRP2BP	ENST00000435364	human	ensembl	74_37	+1	known	missense	c.1399	p.E467K	1.000	NULL	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	CSRP2BP	HGNC	ENSG00000149474				68	0	0	44	26	37.1429
C20orf26	0	genome.wustl.edu	37	20	20278851	20278851	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	20278851	20278851	G	A	SNP	C20orf26	ENST00000245957	human	ensembl	74_37	+1	known	silent	c.3243	p.A1081	0.000	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101				64	0	0	37	23	38.3333
PAX1	0	genome.wustl.edu	37	20	21689866	21689866	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	21689866	21689866	T	C	SNP	PAX1	ENST00000398485	human	ensembl	74_37	+1	known	missense	c.1066	p.S356P	0.075	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX1	HGNC	ENSG00000125813				236	2	0.840336	135	41	23.2955
CD93	0	genome.wustl.edu	37	20	23064957	23064957	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	23064957	23064957	C	T	SNP	CD93	ENST00000246006	human	ensembl	74_37	-1	known	missense	c.1873	p.A625T	0.011	NULL	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_MFS_dom_general_subst_transpt,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CD93	HGNC	ENSG00000125810				237	0	0	105	56	34.7826
GZF1	0	genome.wustl.edu	37	20	23350276	23350276	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	23350276	23350276	C	A	SNP	GZF1	ENST00000338121	human	ensembl	74_37	+1	known	silent	c.1683	p.A561	0.710	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	GZF1	HGNC	ENSG00000125812				182	0	0	74	37	33.3333
PYGB	0	genome.wustl.edu	37	20	25259726	25259726	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	25259726	25259726	C	A	SNP	PYGB	ENST00000216962	human	ensembl	74_37	+1	known	missense	c.1033	p.L345I	0.977	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGB	HGNC	ENSG00000100994				39	0	0	18	9	33.3333
NINL	0	genome.wustl.edu	37	20	25457303	25457303	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	25457303	25457303	G	C	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	missense	c.2624	p.A875G	0.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004				17	0	0	13	6	31.5789
NINL	0	genome.wustl.edu	37	20	25457469	25457469	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	25457469	25457469	G	A	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	missense	c.2458	p.P820S	0.002	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004				49	0	0	27	12	30.7692
IDH3B	0	genome.wustl.edu	37	20	2639164	2639164	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	2639164	2639164	C	T	SNP	IDH3B	ENST00000380851	human	ensembl	74_37	-1	known	missense	c.1076	p.R359Q	1.000	pfam_IsoPropMal-DH-like_dom,tigrfam_Isocitrate_DH_NAD	pfam_IsoPropMal-DH-like_dom,tigrfam_Isocitrate_DH_NAD	-	no_errors	IDH3B	HGNC	ENSG00000101365				40	0	0	15	11	42.3077
PTPRA	0	genome.wustl.edu	37	20	2967446	2967446	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	2967446	2967446	T	A	SNP	PTPRA	ENST00000425918	human	ensembl	74_37	+1	known	missense	c.511	p.S171T	1.000	pirsf_Tyr_Pase_rcpt_a/e-type	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRA	HGNC	ENSG00000132670				89	0	0	49	9	15.5172
TM9SF4	0	genome.wustl.edu	37	20	30745748	30745748	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	30745748	30745748	G	A	SNP	TM9SF4	ENST00000398022	human	ensembl	74_37	+1	known	missense	c.1481	p.R494Q	1.000	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF4	HGNC	ENSG00000101337				110	0	0	66	42	38.8889
DNMT3B	0	genome.wustl.edu	37	20	31387079	31387079	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	31387079	31387079	C	T	SNP	DNMT3B	ENST00000328111	human	ensembl	74_37	+1	known	silent	c.1704	p.P568	0.053	NULL	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3B	HGNC	ENSG00000088305				40	0	0	13	5	27.7778
BPIFA3	0	genome.wustl.edu	37	20	31812171	31812171	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	31812171	31812171	A	G	SNP	BPIFA3	ENST00000375454	human	ensembl	74_37	+1	known	missense	c.289	p.T97A	0.998	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom	-	no_errors	BPIFA3	HGNC	ENSG00000131059				109	1	0.909091	70	5	6.66667
BPIFB1	0	genome.wustl.edu	37	20	31891811	31891811	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	31891811	31891811	A	G	SNP	BPIFB1	ENST00000253354	human	ensembl	74_37	+1	known	missense	c.1188	p.I396M	0.117	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,pirsf_PLUNC_long_form	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,pirsf_PLUNC_long_form	-	no_errors	BPIFB1	HGNC	ENSG00000125999				172	0	0	93	5	5.10204
SLC4A11	0	genome.wustl.edu	37	20	3211287	3211287	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	3211287	3211287	C	T	SNP	SLC4A11	ENST00000380059	human	ensembl	74_37	-1	known	missense	c.1418	p.R473H	0.043	pfam_HCO3_transpt_C	pfam_HCO3_transpt_C,pfam_PTS_EIIA_type-2_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk	-	no_errors	SLC4A11	HGNC	ENSG00000088836				107	0	0	75	47	38.5246
ZNF341	0	genome.wustl.edu	37	20	32379191	32379191	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	32379191	32379191	G	A	SNP	ZNF341	ENST00000375200	human	ensembl	74_37	+1	known	silent	c.2433	p.A811	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF341	HGNC	ENSG00000131061				85	0	0	52	31	37.3494
C20orf194	0	genome.wustl.edu	37	20	3240189	3240189	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	3240189	3240189	A	C	SNP	C20orf194	ENST00000252032	human	ensembl	74_37	-1	known	missense	c.2992	p.S998A	0.990	NULL	NULL	-	no_errors	C20orf194	HGNC	ENSG00000088854				88	0	0	71	5	6.57895
ERGIC3	0	genome.wustl.edu	37	20	34130099	34130099	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	34130099	34130099	T	G	SNP	ERGIC3	ENST00000447986	human	ensembl	74_37	+1	known	missense	c.116	p.L39R	1.000	NULL	pfam_Erv_C	-	no_errors	ERGIC3	HGNC	ENSG00000125991				158	0	0	104	7	6.30631
ERGIC3	0	genome.wustl.edu	37	20	34144042	34144042	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	34144042	34144042	G	T	SNP	ERGIC3	ENST00000447986	human	ensembl	74_37	+1	known	missense	c.924	p.E308D	1.000	pfam_Erv_C	pfam_Erv_C	-	no_errors	ERGIC3	HGNC	ENSG00000125991				93	0	0	70	21	23.0769
PHF20	0	genome.wustl.edu	37	20	34451082	34451082	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	34451082	34451082	C	T	SNP	PHF20	ENST00000374012	human	ensembl	74_37	+1	known	nonsense	c.568	p.R190*	0.998	pfam_DUF3776	pfam_DUF3776,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_C2H2	-	no_errors	PHF20	HGNC	ENSG00000025293				87	0	0	75	43	36.4407
EPB41L1	0	genome.wustl.edu	37	20	34761845	34761845	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	34761845	34761845	C	A	SNP	EPB41L1	ENST00000338074	human	ensembl	74_37	+1	known	missense	c.146	p.P49Q	0.000	pirsf_Band_41_protein	pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB_dom,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L1	HGNC	ENSG00000088367				37	0	0	22	10	31.25
DLGAP4	0	genome.wustl.edu	37	20	35155282	35155282	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	35155282	35155282	G	A	SNP	DLGAP4	ENST00000339266	human	ensembl	74_37	+1	known	missense	c.2827	p.D943N	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP4	HGNC	ENSG00000080845				27	0	0	26	18	40.9091
SOGA1	0	genome.wustl.edu	37	20	35431359	35431359	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	35431359	35431359	C	T	SNP	SOGA1	ENST00000237536	human	ensembl	74_37	-1	known	missense	c.3239	p.R1080H	0.997	NULL	pfam_SOGA	-	no_errors	SOGA1	HGNC	ENSG00000149639				14	0	0	4	6	60
RALGAPB	0	genome.wustl.edu	37	20	37179846	37179846	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	37179846	37179846	C	T	SNP	RALGAPB	ENST00000262879	human	ensembl	74_37	+1	known	missense	c.3142	p.H1048Y	1.000	NULL	superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPB	HGNC	ENSG00000170471				145	0	0	65	30	31.5789
SLC32A1	0	genome.wustl.edu	37	20	37353656	37353656	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	37353656	37353656	G	A	SNP	SLC32A1	ENST00000217420	human	ensembl	74_37	+1	known	missense	c.289	p.G97S	0.834	NULL	pfam_AA_transpt_TM	-	no_errors	SLC32A1	HGNC	ENSG00000101438				107	0	0	90	38	29.6875
C20orf27	0	genome.wustl.edu	37	20	3736176	3736176	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	3736176	3736176	G	A	SNP	C20orf27	ENST00000217195	human	ensembl	74_37	-1	known	missense	c.316	p.R106C	0.076	NULL	NULL	-	no_errors	C20orf27	HGNC	ENSG00000101220				60	0	0	34	19	35.8491
CENPB	0	genome.wustl.edu	37	20	3766612	3766612	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	3766612	3766612	G	A	SNP	CENPB	ENST00000379751	human	ensembl	74_37	-1	known	silent	c.519	p.R173	0.064	NULL	pfam_Centromere_CenpB_dimerisation,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	CENPB	HGNC	ENSG00000125817				17	0	0	12	10	45.4545
MAFB	0	genome.wustl.edu	37	20	39317075	39317075	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	39317075	39317075	G	T	SNP	MAFB	ENST00000373313	human	ensembl	74_37	-1	known	missense	c.416	p.P139H	0.996	NULL	pfam_bZIP_Maf,pfam_Maf_TF_N,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	MAFB	HGNC	ENSG00000204103				24	0	0	34	4	10.5263
CHD6	0	genome.wustl.edu	37	20	40080570	40080570	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	40080570	40080570	T	C	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.3419	p.Y1140C	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177				140	0	0	65	33	33.6735
MYBL2	0	genome.wustl.edu	37	20	42338651	42338651	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	42338651	42338651	G	T	SNP	MYBL2	ENST00000217026	human	ensembl	74_37	+1	known	silent	c.1554	p.T518	0.009	pfam_C-myb_C	pfam_C-myb_C,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL2	HGNC	ENSG00000101057				296	0	0	311	84	21.2658
JPH2	0	genome.wustl.edu	37	20	42744342	42744342	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	42744342	42744342	G	A	SNP	JPH2	ENST00000372980	human	ensembl	74_37	-1	known	missense	c.1973	p.A658V	0.355	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH2	HGNC	ENSG00000149596				77	0	0	57	13	18.5714
ADA	0	genome.wustl.edu	37	20	43249743	43249743	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	43249743	43249743	C	T	SNP	ADA	ENST00000372874	human	ensembl	74_37	-1	known	silent	c.891	p.P297	0.000	pfam_A/AMP_deaminase_dom,tigrfam_Ado/ade_deaminase	pfam_A/AMP_deaminase_dom,tigrfam_Ado/ade_deaminase	-	no_errors	ADA	HGNC	ENSG00000196839				81	0	0	42	28	40
KCNS1	0	genome.wustl.edu	37	20	43727277	43727277	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	43727277	43727277	G	A	SNP	KCNS1	ENST00000306117	human	ensembl	74_37	-1	known	missense	c.136	p.R46W	0.998	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNS1	HGNC	ENSG00000124134				15	0	0	6	3	33.3333
ACOT8	0	genome.wustl.edu	37	20	44472181	44472181	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	44472181	44472181	C	T	SNP	ACOT8	ENST00000217455	human	ensembl	74_37	-1	known	missense	c.826	p.E276K	1.000	pfam_Acyl_CoA_thio_II_dom,tigrfam_Acyl_CoA_thio	pfam_Acyl_CoA_thio_II_dom,tigrfam_Acyl_CoA_thio	-	no_errors	ACOT8	HGNC	ENSG00000101473				22	0	0	26	11	29.7297
MMP9	0	genome.wustl.edu	37	20	44642368	44642368	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	44642368	44642368	C	T	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	silent	c.1683	p.P561	0.002	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985				41	0	0	15	12	44.4444
SLC12A5	0	genome.wustl.edu	37	20	44676687	44676687	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	44676687	44676687	C	T	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	missense	c.2044	p.R682C	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140				26	0	0	11	8	42.1053
SLC12A5	0	genome.wustl.edu	37	20	44681755	44681755	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	44681755	44681755	G	A	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	missense	c.2606	p.R869Q	1.000	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140				52	0	0	38	11	22.449
ZNF334	0	genome.wustl.edu	37	20	45130773	45130773	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	45130773	45130773	T	C	SNP	ZNF334	ENST00000347606	human	ensembl	74_37	-1	known	missense	c.1205	p.E402G	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF334	HGNC	ENSG00000198185				137	0	0	103	7	6.36364
STAU1	0	genome.wustl.edu	37	20	47741096	47741096	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	47741096	47741096	A	G	SNP	STAU1	ENST00000371856	human	ensembl	74_37	-1	known	missense	c.638	p.M213T	1.000	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	STAU1	HGNC	ENSG00000124214				92	0	0	68	21	23.5955
ZNFX1	0	genome.wustl.edu	37	20	47887624	47887624	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	47887624	47887624	T	A	SNP	ZNFX1	ENST00000371752	human	ensembl	74_37	-1	known	missense	c.725	p.E242V	1.000	superfamily_ARM-type_fold	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_Znf_NFX1	-	no_errors	ZNFX1	HGNC	ENSG00000124201				128	0	0	97	6	5.82524
SLC9A8	0	genome.wustl.edu	37	20	48472028	48472028	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	48472028	48472028	T	C	SNP	SLC9A8	ENST00000417961	human	ensembl	74_37	+1	known	missense	c.671	p.I224T	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A8	HGNC	ENSG00000197818				140	0	0	57	25	30.4878
ATP9A	0	genome.wustl.edu	37	20	50313974	50313974	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	50313974	50313974	T	C	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	missense	c.484	p.I162V	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793				192	0	0	124	8	6.06061
ZFP64	0	genome.wustl.edu	37	20	50769393	50769393	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	50769393	50769393	C	T	SNP	ZFP64	ENST00000216923	human	ensembl	74_37	-1	known	silent	c.1338	p.Q446	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP64	HGNC	ENSG00000020256				74	0	0	43	25	36.7647
ZNF217	0	genome.wustl.edu	37	20	52199147	52199147	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	52199147	52199147	G	T	SNP	ZNF217	ENST00000302342	human	ensembl	74_37	-1	known	silent	c.219	p.T73	0.999	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF217	HGNC	ENSG00000171940				152	0	0	100	25	20
RTFDC1	0	genome.wustl.edu	37	20	55059189	55059189	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	55059189	55059189	G	A	SNP	RTFDC1	ENST00000357348	human	ensembl	74_37	+1	known	missense	c.511	p.G171S	1.000	pfam_Rtf2_RING-finger	pfam_Rtf2_RING-finger	-	no_errors	RTFDC1	HGNC	ENSG00000022277				119	1	0.833333	54	32	37.2093
BMP7	0	genome.wustl.edu	37	20	55803316	55803316	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	55803316	55803316	C	T	SNP	BMP7	ENST00000395863	human	ensembl	74_37	-1	known	missense	c.580	p.V194I	0.997	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	BMP7	HGNC	ENSG00000101144				212	0	0	169	11	6.11111
NPEPL1	0	genome.wustl.edu	37	20	57290264	57290264	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	57290264	57290264	C	T	SNP	NPEPL1	ENST00000356091	human	ensembl	74_37	+1	known	missense	c.1454	p.A485V	1.000	NULL	pfam_Peptidase_M17_C,prints_Leucine_aapep/pepB	-	no_errors	NPEPL1	HGNC	ENSG00000215440				15	0	0	13	6	31.5789
TRMT6	0	genome.wustl.edu	37	20	5925451	5925451	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	5925451	5925451	C	A	SNP	TRMT6	ENST00000203001	human	ensembl	74_37	-1	known	missense	c.366	p.E122D	1.000	pfam_EIF3_gamma,pirsf_tRNA_m1A_mtfrase	pfam_EIF3_gamma,pirsf_tRNA_m1A_mtfrase	-	no_errors	TRMT6	HGNC	ENSG00000089195				73	0	0	51	8	13.5593
ADRM1	0	genome.wustl.edu	37	20	60881312	60881312	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	60881312	60881312	C	T	SNP	ADRM1	ENST00000253003	human	ensembl	74_37	+1	known	silent	c.390	p.N130	1.000	pfam_26S_Psome_Ubiquitin-recp_Rpn13	pfam_26S_Psome_Ubiquitin-recp_Rpn13	-	no_errors	ADRM1	HGNC	ENSG00000130706				147	0	0	53	37	41.1111
CABLES2	0	genome.wustl.edu	37	20	60966352	60966352	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	60966352	60966352	T	C	SNP	CABLES2	ENST00000279101	human	ensembl	74_37	-1	known	missense	c.1249	p.K417E	1.000	pfam_Cyclin_N,superfamily_Cyclin-like,pirsf_Cdk5/c-Abl_linker_Cables	pfam_Cyclin_N,superfamily_Cyclin-like,pirsf_Cdk5/c-Abl_linker_Cables	-	no_errors	CABLES2	HGNC	ENSG00000149679				119	0	0	126	34	21.25
OGFR	0	genome.wustl.edu	37	20	61443861	61443861	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	61443861	61443861	C	T	SNP	OGFR	ENST00000290291	human	ensembl	74_37	+1	known	silent	c.894	p.S298	0.000	NULL	pfam_OGF_rcpt,pfam_OGF_rcpt_rpt	-	no_errors	OGFR	HGNC	ENSG00000060491				12	0	0	15	3	16.6667
DIDO1	0	genome.wustl.edu	37	20	61526496	61526496	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	61526496	61526496	G	A	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.2236	p.R746C	0.154	pfam_TFIIS_cen_dom,superfamily_TFIIS_cen_dom,smart_TFS2M	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191				225	0	0	113	55	32.7381
PPDPF	0	genome.wustl.edu	37	20	62153137	62153137	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	62153137	62153137	T	C	SNP	PPDPF	ENST00000370177	human	ensembl	74_37	+1	known	missense	c.328	p.S110P	0.003	NULL	NULL	-	no_errors	PPDPF	HGNC	ENSG00000125534				50	0	0	22	9	29.0323
PLCB4	0	genome.wustl.edu	37	20	9401986	9401986	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	9401986	9401986	T	C	SNP	PLCB4	ENST00000334005	human	ensembl	74_37	+1	known	missense	c.2161	p.Y721H	0.993	pirsf_PLC-beta,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_PLC-beta_CS,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB4	HGNC	ENSG00000101333				75	0	0	38	10	20.8333
KRTAP24-1	0	genome.wustl.edu	37	21	31654782	31654782	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	31654782	31654782	A	C	SNP	KRTAP24-1	ENST00000340345	human	ensembl	74_37	-1	known	missense	c.469	p.C157G	0.000	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP24-1	HGNC	ENSG00000188694				176	0	0	118	8	6.34921
KRTAP26-1	0	genome.wustl.edu	37	21	31691941	31691941	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	31691941	31691941	C	T	SNP	KRTAP26-1	ENST00000360542	human	ensembl	74_37	-1	known	missense	c.413	p.C138Y	0.000	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP26-1	HGNC	ENSG00000197683				263	0	0	155	96	38.247
KRTAP20-1	0	genome.wustl.edu	37	21	31988810	31988810	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	31988810	31988810	T	C	SNP	KRTAP20-1	ENST00000334664	human	ensembl	74_37	+1	known	missense	c.37	p.Y13H	0.007	pfam_KRTAP_type6/8/16/19/20	pfam_KRTAP_type6/8/16/19/20	-	no_errors	KRTAP20-1	HGNC	ENSG00000244624				81	0	0	66	19	22.3529
KRTAP21-2	0	genome.wustl.edu	37	21	32119422	32119422	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	32119422	32119422	G	T	SNP	KRTAP21-2	ENST00000333892	human	ensembl	74_37	-1	known	nonsense	c.99	p.Y33*	0.002	pfam_KRTAP_type6/8/16/19/20	pfam_KRTAP_type6/8/16/19/20	-	no_errors	KRTAP21-2	HGNC	ENSG00000187026				56	0	0	59	30	33.7079
DNAJC28	0	genome.wustl.edu	37	21	34861340	34861340	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	34861340	34861340	C	A	SNP	DNAJC28	ENST00000314399	human	ensembl	74_37	-1	known	nonsense	c.361	p.E121*	0.998	NULL	pfam_DnaJ_homolog_subfam-C_membr-28,pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain	-	no_errors	DNAJC28	HGNC	ENSG00000177692				68	0	0	55	6	9.83607
DOPEY2	0	genome.wustl.edu	37	21	37617711	37617711	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	37617711	37617711	T	C	SNP	DOPEY2	ENST00000399151	human	ensembl	74_37	+1	known	missense	c.3433	p.C1145R	0.989	NULL	pfam_Dopey_N	-	no_errors	DOPEY2	HGNC	ENSG00000142197				92	0	0	80	5	5.88235
DSCAM	0	genome.wustl.edu	37	21	41414452	41414452	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	41414452	41414452	C	T	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	silent	c.5532	p.S1844	0.217	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587				156	0	0	75	52	40.9449
MX1	0	genome.wustl.edu	37	21	42824610	42824610	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	42824610	42824610	C	T	SNP	MX1	ENST00000398598	human	ensembl	74_37	+1	known	silent	c.1572	p.H524	1.000	pfam_Dynamin_central,superfamily_P-loop_NTPase	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_GED,prints_Dynamin_SF	-	no_errors	MX1	HGNC	ENSG00000157601				143	0	0	84	52	38.2353
RIPK4	0	genome.wustl.edu	37	21	43161183	43161183	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	43161183	43161183	T	C	SNP	RIPK4	ENST00000352483	human	ensembl	74_37	-1	known	missense	c.2314	p.S772G	0.525	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RIPK4	HGNC	ENSG00000183421				118	0	0	127	13	9.28571
CBS	0	genome.wustl.edu	37	21	44484071	44484071	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	44484071	44484071	C	T	SNP	CBS	ENST00000398168	human	ensembl	74_37	-1	known	missense	c.767	p.G256D	1.000	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,tigrfam_Cysta_beta_synth	pfam_Trp_syn_b_sub_like_PLP_eny_SF,pfam_CBS_dom,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,smart_CBS_dom,tigrfam_Cysta_beta_synth	-	no_errors	CBS	HGNC	ENSG00000160200				26	0	0	7	5	41.6667
PWP2	0	genome.wustl.edu	37	21	45540377	45540377	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	45540377	45540377	G	T	SNP	PWP2	ENST00000291576	human	ensembl	74_37	+1	known	missense	c.1337	p.R446M	1.000	superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_SSU_processome_Utp12,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PWP2	HGNC	ENSG00000241945				234	0	0	119	72	37.6963
KRTAP10-6	0	genome.wustl.edu	37	21	46011355	46011355	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	46011355	46011355	C	T	SNP	KRTAP10-6	ENST00000400368	human	ensembl	74_37	-1	known	silent	c.1011	p.T337	0.001	NULL	NULL	-	no_errors	KRTAP10-6	HGNC	ENSG00000188155				103	0	0	133	10	6.99301
KRTAP10-12	0	genome.wustl.edu	37	21	46117397	46117397	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	46117397	46117397	G	A	SNP	KRTAP10-12	ENST00000400365	human	ensembl	74_37	+1	known	missense	c.281	p.C94Y	0.641	NULL	NULL	-	no_errors	KRTAP10-12	HGNC	ENSG00000189169				225	0	0	282	34	10.7595
UBE2G2	0	genome.wustl.edu	37	21	46207833	46207833	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	46207833	46207833	A	G	SNP	UBE2G2	ENST00000345496	human	ensembl	74_37	-1	known	splice_site	c.125+2	e3+2	0.999	-	-	-	no_errors	UBE2G2	HGNC	ENSG00000184787				29	0	0	15	6	28.5714
PCBP3	0	genome.wustl.edu	37	21	47361676	47361676	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	47361676	47361676	G	A	SNP	PCBP3	ENST00000475402	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.988	-	-	-	no_errors	PCBP3	HGNC	ENSG00000183570				54	0	0	32	3	8.57143
COL6A2	0	genome.wustl.edu	37	21	47532203	47532203	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	47532203	47532203	G	T	SNP	COL6A2	ENST00000300527	human	ensembl	74_37	+1	known	silent	c.426	p.T142	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A2	HGNC	ENSG00000142173				54	0	0	41	13	24.0741
SPATC1L	0	genome.wustl.edu	37	21	47581388	47581388	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	47581388	47581388	C	T	SNP	SPATC1L	ENST00000291672	human	ensembl	74_37	-1	known	missense	c.928	p.V310M	0.101	NULL	NULL	-	no_errors	SPATC1L	HGNC	ENSG00000160284				25	0	0	14	6	30
DIP2A	0	genome.wustl.edu	37	21	47966845	47966845	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	47966845	47966845	C	T	SNP	DIP2A	ENST00000318711	human	ensembl	74_37	+1	known	silent	c.2415	p.I805	0.997	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2A	HGNC	ENSG00000160305				45	0	0	28	8	22.2222
ZNF74	0	genome.wustl.edu	37	22	20759744	20759744	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	20759744	20759744	C	T	SNP	ZNF74	ENST00000356671	human	ensembl	74_37	+1	known	missense	c.421	p.R141W	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF74	HGNC	ENSG00000185252				63	0	0	56	36	39.1304
ZNF74	0	genome.wustl.edu	37	22	20760486	20760486	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	20760486	20760486	A	G	SNP	ZNF74	ENST00000356671	human	ensembl	74_37	+1	known	missense	c.1163	p.Y388C	0.442	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF74	HGNC	ENSG00000185252				91	0	0	81	25	23.5849
KLHL22	0	genome.wustl.edu	37	22	20819706	20819706	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	20819706	20819706	C	T	SNP	KLHL22	ENST00000328879	human	ensembl	74_37	-1	known	missense	c.551	p.R184Q	0.986	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL22	HGNC	ENSG00000099910				99	0	0	57	41	41.8367
PI4KA	0	genome.wustl.edu	37	22	21064993	21064993	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	21064993	21064993	G	A	SNP	PI4KA	ENST00000255882	human	ensembl	74_37	-1	known	missense	c.6077	p.A2026V	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PI4KA	HGNC	ENSG00000241973				120	1	0.826446	90	5	5.26316
PI4KA	0	genome.wustl.edu	37	22	21098980	21098980	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	21098980	21098980	C	T	SNP	PI4KA	ENST00000255882	human	ensembl	74_37	-1	known	missense	c.3392	p.C1131Y	1.000	NULL	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PI4KA	HGNC	ENSG00000241973				79	0	0	45	20	30.7692
VPREB1	0	genome.wustl.edu	37	22	22599237	22599237	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	22599237	22599237	T	A	SNP	VPREB1	ENST00000302273	human	ensembl	74_37	+1	novel	missense	c.23	p.L8H	0.008	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	VPREB1	HGNC	ENSG00000169575				76	0	0	48	25	34.2466
SUSD2	0	genome.wustl.edu	37	22	24581989	24581989	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	24581989	24581989	G	A	SNP	SUSD2	ENST00000358321	human	ensembl	74_37	+1	known	missense	c.1345	p.A449T	0.960	pfam_VWF_type-D,smart_VWF_type-D	pfam_AMOP,pfam_VWF_type-D,pfam_Sushi_SCR_CCP,pfam_Somatomedin_B_dom,superfamily_Sushi_SCR_CCP,superfamily_Ig_E-set,smart_AMOP,smart_VWF_type-D,smart_Sushi_SCR_CCP,pfscan_AMOP,pfscan_Somatomedin_B_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD2	HGNC	ENSG00000099994				31	0	0	19	3	13.6364
SPECC1L	0	genome.wustl.edu	37	22	24759282	24759282	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	24759282	24759282	C	T	SNP	SPECC1L	ENST00000314328	human	ensembl	74_37	+1	known	missense	c.2797	p.P933S	0.976	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_bHLH_dom,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1L	HGNC	ENSG00000100014				70	0	0	38	17	30.9091
TFIP11	0	genome.wustl.edu	37	22	26890245	26890245	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	26890245	26890245	C	T	SNP	TFIP11	ENST00000405938	human	ensembl	74_37	-1	known	missense	c.2018	p.S673N	1.000	NULL	pfam_GCFC_dom,pfam_TIP_N,pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	TFIP11	HGNC	ENSG00000100109				100	0	0	48	11	18.6441
CRYBA4	0	genome.wustl.edu	37	22	27019233	27019233	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	27019233	27019233	G	A	SNP	CRYBA4	ENST00000354760	human	ensembl	74_37	+1	known	silent	c.75	p.R25	0.994	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBA4	HGNC	ENSG00000196431				165	0	0	142	10	6.57895
EWSR1	0	genome.wustl.edu	37	22	29694762	29694762	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	29694762	29694762	G	A	SNP	EWSR1	ENST00000414183	human	ensembl	74_37	+1	known	missense	c.1472	p.R491H	1.000	NULL	pfam_Znf_RanBP2,pfam_RRM_dom,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	EWSR1	HGNC	ENSG00000182944				158	0	0	81	51	38.6364
AP1B1	0	genome.wustl.edu	37	22	29759048	29759048	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	29759048	29759048	T	C	SNP	AP1B1	ENST00000357586	human	ensembl	74_37	-1	known	missense	c.85	p.K29E	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,pfam_HEAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Armadillo,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP1B1	HGNC	ENSG00000100280				192	0	0	153	13	7.83133
GAL3ST1	0	genome.wustl.edu	37	22	30951410	30951410	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	30951410	30951410	A	G	SNP	GAL3ST1	ENST00000338911	human	ensembl	74_37	-1	known	missense	c.802	p.W268R	1.000	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST1	HGNC	ENSG00000128242				151	0	0	135	36	21.0526
SMTN	0	genome.wustl.edu	37	22	31487145	31487145	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	31487145	31487145	G	A	SNP	SMTN	ENST00000347557	human	ensembl	74_37	+1	known	missense	c.1136	p.S379N	0.107	NULL	pfam_Smoothelin,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTN	HGNC	ENSG00000183963				59	0	0	39	27	40.9091
PATZ1	0	genome.wustl.edu	37	22	31741294	31741294	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	31741294	31741294	C	G	SNP	PATZ1	ENST00000266269	human	ensembl	74_37	-1	known	missense	c.295	p.G99R	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	PATZ1	HGNC	ENSG00000100105				53	0	0	65	8	10.9589
LARGE	0	genome.wustl.edu	37	22	33670583	33670583	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	33670583	33670583	C	T	SNP	LARGE	ENST00000354992	human	ensembl	74_37	-1	known	missense	c.2101	p.A701T	1.000	NULL	pfam_Glyco_trans_8	-	no_errors	LARGE	HGNC	ENSG00000133424				82	0	0	74	5	6.32911
LARGE	0	genome.wustl.edu	37	22	34157424	34157424	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	34157424	34157424	C	T	SNP	LARGE	ENST00000354992	human	ensembl	74_37	-1	known	missense	c.40	p.A14T	1.000	NULL	pfam_Glyco_trans_8	-	no_errors	LARGE	HGNC	ENSG00000133424				125	0	0	60	26	30.2326
MYH9	0	genome.wustl.edu	37	22	36680499	36680499	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	36680499	36680499	G	A	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	silent	c.5542	p.L1848	0.000	pfam_Myosin_tail,superfamily_Regulat_G_prot_signal_superfam	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345				86	0	0	90	7	7.21649
NCF4	0	genome.wustl.edu	37	22	37260993	37260993	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	37260993	37260993	A	G	SNP	NCF4	ENST00000397147	human	ensembl	74_37	+1	known	silent	c.150	p.G50	0.004	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain,prints_NCF_P40,prints_p67phox	-	no_errors	NCF4	HGNC	ENSG00000100365				117	0	0	39	23	37.0968
ELFN2	0	genome.wustl.edu	37	22	37770940	37770940	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	37770940	37770940	C	T	SNP	ELFN2	ENST00000402918	human	ensembl	74_37	-1	known	missense	c.635	p.R212H	1.000	NULL	superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,pfscan_LPXTG_anchor	-	no_errors	ELFN2	HGNC	ENSG00000166897				43	0	0	24	18	42.8571
GCAT	0	genome.wustl.edu	37	22	38211780	38211780	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	38211780	38211780	G	A	SNP	GCAT	ENST00000248924	human	ensembl	74_37	+1	known	missense	c.925	p.A309T	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,tigrfam_2am3keto_CoA_ligase	pfam_Aminotransferase_I/II,pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,tigrfam_2am3keto_CoA_ligase	-	no_errors	GCAT	HGNC	ENSG00000100116				251	0	0	130	83	38.9671
ANKRD54	0	genome.wustl.edu	37	22	38234581	38234581	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	38234581	38234581	G	A	SNP	ANKRD54	ENST00000215941	human	ensembl	74_37	-1	known	missense	c.401	p.A134V	0.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD54	HGNC	ENSG00000100124				23	0	0	10	5	33.3333
KCNJ4	0	genome.wustl.edu	37	22	38823103	38823103	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	38823103	38823103	C	T	SNP	KCNJ4	ENST00000303592	human	ensembl	74_37	-1	known	silent	c.1035	p.T345	0.993	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.3	-	no_errors	KCNJ4	HGNC	ENSG00000168135				49	0	0	27	13	32.5
KDELR3	0	genome.wustl.edu	37	22	38875728	38875728	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	38875728	38875728	T	G	SNP	KDELR3	ENST00000409006	human	ensembl	74_37	+1	known	missense	c.323	p.L108R	1.000	pfam_ER_ret_rcpt,superfamily_Cyt_c_oxidase_su2_TM_dom	pfam_ER_ret_rcpt,superfamily_Cyt_c_oxidase_su2_TM_dom,prints_ER_ret_rcpt	-	no_errors	KDELR3	HGNC	ENSG00000100196				306	0	0	199	13	6.13208
MGAT3	0	genome.wustl.edu	37	22	39884006	39884006	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	39884006	39884006	C	T	SNP	MGAT3	ENST00000341184	human	ensembl	74_37	+1	known	silent	c.654	p.F218	1.000	pfam_Glyco_trans_17	pfam_Glyco_trans_17	-	no_errors	MGAT3	HGNC	ENSG00000128268				46	0	0	24	12	33.3333
TNRC6B	0	genome.wustl.edu	37	22	40658006	40658006	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	40658006	40658006	C	T	SNP	TNRC6B	ENST00000454349	human	ensembl	74_37	+1	known	missense	c.286	p.R96C	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354				31	0	0	30	7	18.9189
TNRC6B	0	genome.wustl.edu	37	22	40681739	40681739	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	40681739	40681739	C	T	SNP	TNRC6B	ENST00000454349	human	ensembl	74_37	+1	known	missense	c.3673	p.R1225W	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354				187	1	0.531915	89	49	35.5072
EP300	0	genome.wustl.edu	37	22	41574595	41574595	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	41574595	41574595	C	A	SNP	EP300	ENST00000263253	human	ensembl	74_37	+1	known	missense	c.6880	p.L2294I	0.998	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC	ENSG00000100393				90	0	0	101	6	5.60748
RANGAP1	0	genome.wustl.edu	37	22	41652064	41652064	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	41652064	41652064	A	G	SNP	RANGAP1	ENST00000356244	human	ensembl	74_37	-1	known	missense	c.1034	p.L345P	1.000	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_Ran_GTPase_activating_1_C,superfamily_Ran_GTPase_activating_1_C,smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	RANGAP1	HGNC	ENSG00000100401				53	0	0	34	17	33.3333
ACO2	0	genome.wustl.edu	37	22	41865263	41865263	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	41865263	41865263	G	A	SNP	ACO2	ENST00000471094	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.286	-	-	-	no_errors	ACO2	HGNC	ENSG00000100412				51	0	0	35	18	33.9623
TCF20	0	genome.wustl.edu	37	22	42610384	42610384	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	42610384	42610384	G	T	SNP	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	missense	c.928	p.Q310K	1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207				113	0	0	66	33	33.3333
RRP7B	0	genome.wustl.edu	37	22	42969930	42969930	+	RNA	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	42969930	42969930	T	C	SNP	RRP7B	ENST00000458605	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RRP7B	HGNC	ENSG00000182841				191	0	0	161	40	19.9005
CYB5R3	0	genome.wustl.edu	37	22	43024235	43024235	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	43024235	43024235	T	C	SNP	CYB5R3	ENST00000361740	human	ensembl	74_37	-1	known	missense	c.485	p.Q162R	1.000	pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl	pfam_OxRdtase_FAD-bd_dom,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,prints_NADH-Cyt_B5_reductase,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase	-	no_errors	CYB5R3	HGNC	ENSG00000100243				241	0	0	207	12	5.47945
KIAA0930	0	genome.wustl.edu	37	22	45599792	45599792	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	45599792	45599792	C	T	SNP	KIAA0930	ENST00000251993	human	ensembl	74_37	-1	known	silent	c.606	p.T202	0.967	pfam_DUF2045	pfam_DUF2045	-	no_errors	KIAA0930	HGNC	ENSG00000100364				71	0	0	49	30	37.9747
FAM118A	0	genome.wustl.edu	37	22	45719132	45719132	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	45719132	45719132	G	A	SNP	FAM118A	ENST00000216214	human	ensembl	74_37	+1	known	missense	c.124	p.V42M	1.000	NULL	superfamily_RNaseH-like_dom	-	no_errors	FAM118A	HGNC	ENSG00000100376				97	0	0	68	5	6.84932
SMC1B	0	genome.wustl.edu	37	22	45809407	45809407	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	45809407	45809407	C	T	SNP	SMC1B	ENST00000357450	human	ensembl	74_37	-1	known	silent	c.42	p.S14	0.957	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_t-SNARE,smart_SMC_hinge	-	no_errors	SMC1B	HGNC	ENSG00000077935				23	0	0	19	5	20.8333
ZBED4	0	genome.wustl.edu	37	22	50277809	50277809	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	50277809	50277809	A	G	SNP	ZBED4	ENST00000216268	human	ensembl	74_37	+1	known	missense	c.499	p.T167A	0.555	smart_Znf_BED_prd,pfscan_Znf_BED_prd	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED4	HGNC	ENSG00000100426				72	0	0	59	26	30.5882
ZBED4	0	genome.wustl.edu	37	22	50280192	50280192	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	50280192	50280192	T	C	SNP	ZBED4	ENST00000216268	human	ensembl	74_37	+1	known	missense	c.2882	p.V961A	1.000	superfamily_RNaseH-like_dom	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED4	HGNC	ENSG00000100426				42	0	0	34	2	5.55556
CRELD2	0	genome.wustl.edu	37	22	50312881	50312881	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	50312881	50312881	A	G	SNP	CRELD2	ENST00000404488	human	ensembl	74_37	+1	known	missense	c.133	p.M45V	0.369	pfam_DUF3456	pfam_DUF3456,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_Furin_repeat,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	CRELD2	HGNC	ENSG00000184164				116	0	0	75	23	23.4694
TUBGCP6	0	genome.wustl.edu	37	22	50659439	50659439	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	50659439	50659439	C	T	SNP	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	missense	c.3349	p.V1117I	0.050	pfam_TUBGCP	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159				290	0	0	235	13	5.24194
PPP6R2	0	genome.wustl.edu	37	22	50875968	50875968	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	50875968	50875968	G	A	SNP	PPP6R2	ENST00000216061	human	ensembl	74_37	+1	known	missense	c.1717	p.A573T	0.990	NULL	pfam_SAPS,superfamily_ARM-type_fold	-	no_errors	PPP6R2	HGNC	ENSG00000100239				61	0	0	38	13	25.4902
PPP6R2	0	genome.wustl.edu	37	22	50879229	50879229	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	50879229	50879229	G	A	SNP	PPP6R2	ENST00000216061	human	ensembl	74_37	+1	known	splice_site	c.2375-1	e20-1	0.000	-	-	-	no_errors	PPP6R2	HGNC	ENSG00000100239				103	0	0	110	8	6.77966
ARSA	0	genome.wustl.edu	37	22	51065609	51065609	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	51065609	51065609	C	T	SNP	ARSA	ENST00000216124	human	ensembl	74_37	-1	known	silent	c.450	p.P150	0.052	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSA	HGNC	ENSG00000100299				43	0	0	26	11	29.7297
TBC1D23	0	genome.wustl.edu	37	3	100029334	100029334	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	100029334	100029334	G	A	SNP	TBC1D23	ENST00000394144	human	ensembl	74_37	+1	known	missense	c.1501	p.V501I	1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_Rhodanese-like_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Rhodanese-like_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Rhodanese-like_dom	-	no_errors	TBC1D23	HGNC	ENSG00000036054				57	0	0	26	14	35
GPR128	0	genome.wustl.edu	37	3	100354440	100354440	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	100354440	100354440	G	A	SNP	GPR128	ENST00000481361	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPR128	HGNC	ENSG00000144820				27	0	0	16	4	20
ATP2B2	0	genome.wustl.edu	37	3	10426972	10426972	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	10426972	10426972	G	A	SNP	ATP2B2	ENST00000352432	human	ensembl	74_37	-1	known	missense	c.980	p.A327V	1.000	pfam_ATPase_P-typ_transduc_dom_A	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B2	HGNC	ENSG00000157087				65	0	0	28	15	34.8837
BBX	0	genome.wustl.edu	37	3	107491997	107491997	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	107491997	107491997	C	T	SNP	BBX	ENST00000325805	human	ensembl	74_37	+1	known	nonsense	c.1429	p.Q477*	1.000	NULL	pfam_TF_HMG_box_BBX_DUF2028,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	BBX	HGNC	ENSG00000114439				101	0	0	67	35	34.3137
SLC9C1	0	genome.wustl.edu	37	3	111898417	111898417	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	111898417	111898417	T	C	SNP	SLC9C1	ENST00000305815	human	ensembl	74_37	-1	known	silent	c.2880	p.E960	0.144	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C1	HGNC	ENSG00000172139				70	0	0	30	18	37.5
CCDC80	0	genome.wustl.edu	37	3	112357464	112357464	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	112357464	112357464	G	A	SNP	CCDC80	ENST00000206423	human	ensembl	74_37	-1	known	missense	c.1289	p.T430I	0.963	NULL	NULL	-	no_errors	CCDC80	HGNC	ENSG00000091986				95	0	0	70	5	6.66667
SIDT1	0	genome.wustl.edu	37	3	113300284	113300284	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	113300284	113300284	C	T	SNP	SIDT1	ENST00000393830	human	ensembl	74_37	+1	known	missense	c.740	p.T247M	1.000	NULL	NULL	-	no_errors	SIDT1	HGNC	ENSG00000072858				81	0	0	38	23	37.7049
IGSF11	0	genome.wustl.edu	37	3	118621466	118621466	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	118621466	118621466	T	C	SNP	IGSF11	ENST00000393775	human	ensembl	74_37	-1	known	silent	c.1197	p.P399	0.009	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGSF11	HGNC	ENSG00000144847				106	0	0	79	9	10.2273
POPDC2	0	genome.wustl.edu	37	3	119367156	119367156	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	119367156	119367156	A	G	SNP	POPDC2	ENST00000341124	human	ensembl	74_37	-1	known	silent	c.960	p.P320	0.000	NULL	pfam_Popeye_prot,superfamily_cNMP-bd-like	-	no_errors	POPDC2	HGNC	ENSG00000121577				57	0	0	33	10	23.2558
MAATS1	0	genome.wustl.edu	37	3	119445068	119445068	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	119445068	119445068	C	T	SNP	MAATS1	ENST00000273390	human	ensembl	74_37	+1	known	missense	c.733	p.R245C	0.999	NULL	superfamily_S-AdoMet_deCO2ase_core	-	no_errors	MAATS1	HGNC	ENSG00000183833				32	0	0	18	13	41.9355
GSK3B	0	genome.wustl.edu	37	3	119562108	119562108	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	119562108	119562108	C	T	SNP	GSK3B	ENST00000316626	human	ensembl	74_37	-1	known	missense	c.1228	p.A410T	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	GSK3B	HGNC	ENSG00000082701				89	0	0	40	15	27.2727
STXBP5L	0	genome.wustl.edu	37	3	121097669	121097669	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	121097669	121097669	A	G	SNP	STXBP5L	ENST00000273666	human	ensembl	74_37	+1	known	silent	c.2355	p.R785	1.000	NULL	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C_dom,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5L	HGNC	ENSG00000145087				68	0	0	26	11	29.7297
GOLGB1	0	genome.wustl.edu	37	3	121395738	121395738	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	121395738	121395738	A	G	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	splice_site	c.9162+2	e16+2	0.993	-	-	-	no_errors	GOLGB1	HGNC	ENSG00000173230				58	0	0	32	10	23.8095
ADCY5	0	genome.wustl.edu	37	3	123010074	123010074	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	123010074	123010074	C	T	SNP	ADCY5	ENST00000462833	human	ensembl	74_37	-1	known	silent	c.3213	p.A1071	0.374	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY5	HGNC	ENSG00000173175				111	0	0	70	40	36.3636
MCM2	0	genome.wustl.edu	37	3	127335861	127335861	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	127335861	127335861	C	T	SNP	MCM2	ENST00000265056	human	ensembl	74_37	+1	known	missense	c.1673	p.A558V	0.999	pfam_MCM_DNA-dep_ATPase,pfam_ATPase_AAA-3,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_MCM2,pfam_Mg_chelatse_chII,pfam_ATPase_AAA-3,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM2,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM2	HGNC	ENSG00000073111				194	0	0	120	11	8.39695
ABTB1	0	genome.wustl.edu	37	3	127395216	127395216	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	127395216	127395216	C	T	SNP	ABTB1	ENST00000232744	human	ensembl	74_37	+1	known	missense	c.422	p.A141V	0.992	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Ankyrin_rpt,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like	-	no_errors	ABTB1	HGNC	ENSG00000114626				112	0	0	62	48	43.6364
PLXND1	0	genome.wustl.edu	37	3	129308232	129308232	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	129308232	129308232	C	A	SNP	PLXND1	ENST00000324093	human	ensembl	74_37	-1	known	missense	c.1450	p.A484S	0.781	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXND1	HGNC	ENSG00000004399				54	0	0	25	4	13.7931
IQSEC1	0	genome.wustl.edu	37	3	12977083	12977083	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	12977083	12977083	C	T	SNP	IQSEC1	ENST00000273221	human	ensembl	74_37	-1	known	missense	c.1475	p.R492H	0.949	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC1	HGNC	ENSG00000144711				172	0	0	58	39	40.2062
PIK3R4	0	genome.wustl.edu	37	3	130425790	130425790	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	130425790	130425790	A	G	SNP	PIK3R4	ENST00000356763	human	ensembl	74_37	-1	known	splice_site	c.2721+2	e10+2	1.000	-	-	-	no_errors	PIK3R4	HGNC	ENSG00000196455				38	0	0	41	3	6.81818
TOPBP1	0	genome.wustl.edu	37	3	133358955	133358955	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	133358955	133358955	T	C	SNP	TOPBP1	ENST00000260810	human	ensembl	74_37	-1	known	missense	c.2081	p.H694R	1.000	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pfam_BRCT_dom,superfamily_BRCT_dom,superfamily_Secretoglobin,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TOPBP1	HGNC	ENSG00000163781				49	0	0	18	9	33.3333
FOXL2	0	genome.wustl.edu	37	3	138665127	138665127	+	Silent	SNP	G	G	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	138665127	138665127	G	C	SNP	FOXL2	ENST00000330315	human	ensembl	74_37	-1	known	silent	c.438	p.R146	0.986	pfam_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXL2	HGNC	ENSG00000183770				24	0	0	25	4	13.7931
ZBTB38	0	genome.wustl.edu	37	3	141162564	141162564	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	141162564	141162564	C	A	SNP	ZBTB38	ENST00000321464	human	ensembl	74_37	+1	known	missense	c.1337	p.P446Q	0.997	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB38	HGNC	ENSG00000177311				61	0	0	33	22	40
ATR	0	genome.wustl.edu	37	3	142243013	142243013	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	142243013	142243013	C	T	SNP	ATR	ENST00000350721	human	ensembl	74_37	-1	known	missense	c.3974	p.S1325N	1.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054				65	0	0	56	5	8.19672
TRPC1	0	genome.wustl.edu	37	3	142443573	142443573	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	142443573	142443573	G	A	SNP	TRPC1	ENST00000476941	human	ensembl	74_37	+1	known	missense	c.172	p.G58S	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,tigrfam_TRP_channel	pfam_TRP_dom,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC1_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC1	HGNC	ENSG00000144935				78	0	0	31	24	43.6364
U2SURP	0	genome.wustl.edu	37	3	142773863	142773863	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	142773863	142773863	G	A	SNP	U2SURP	ENST00000473835	human	ensembl	74_37	+1	known	silent	c.2853	p.S951	0.967	NULL	pfam_Surp,pfam_RRM_dom,superfamily_Surp,superfamily_ENTH_VHS,smart_RRM_dom,smart_Surp,smart_CID_dom,pfscan_Surp,pfscan_RRM_dom	-	no_errors	U2SURP	HGNC	ENSG00000163714				19	0	0	9	9	50
PLOD2	0	genome.wustl.edu	37	3	145822125	145822125	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	145822125	145822125	G	T	SNP	PLOD2	ENST00000282903	human	ensembl	74_37	-1	known	missense	c.620	p.A207D	0.811	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD2	HGNC	ENSG00000152952				54	0	0	26	4	13.3333
HPS3	0	genome.wustl.edu	37	3	148859112	148859112	+	Silent	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	148859112	148859112	C	G	SNP	HPS3	ENST00000296051	human	ensembl	74_37	+1	known	silent	c.915	p.V305	0.001	pirsf_HPS3	pirsf_HPS3	-	no_errors	HPS3	HGNC	ENSG00000163755				145	0	0	88	30	25.4237
IGSF10	0	genome.wustl.edu	37	3	151163494	151163494	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	151163494	151163494	G	A	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	silent	c.4275	p.A1425	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580				164	0	0	84	35	29.4118
EAF1	0	genome.wustl.edu	37	3	15477988	15477988	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	15477988	15477988	G	A	SNP	EAF1	ENST00000396842	human	ensembl	74_37	+1	known	silent	c.666	p.P222	0.000	NULL	pfam_Tscrpt_elong_fac_Eaf_N	-	no_errors	EAF1	HGNC	ENSG00000144597				81	0	0	62	5	7.46269
KCNAB1	0	genome.wustl.edu	37	3	156241698	156241698	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	156241698	156241698	C	T	SNP	KCNAB1	ENST00000490337	human	ensembl	74_37	+1	known	missense	c.1043	p.A348V	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB-rel,prints_K_chnl_volt-dep_bsu_KCNAB1,prints_K_chnl_volt-dep_bsu_KCNAB3,tigrfam_K_chnl_volt-dep_bsu_KCNAB	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB-rel,prints_K_chnl_volt-dep_bsu_KCNAB1,prints_K_chnl_volt-dep_bsu_KCNAB3,tigrfam_K_chnl_volt-dep_bsu_KCNAB	-	no_errors	KCNAB1	HGNC	ENSG00000169282				82	0	0	54	29	34.9398
PTX3	0	genome.wustl.edu	37	3	157155313	157155313	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	157155313	157155313	G	A	SNP	PTX3	ENST00000295927	human	ensembl	74_37	+1	known	missense	c.142	p.A48T	1.000	NULL	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_LamG-like,prints_Pentaxin	-	no_errors	PTX3	HGNC	ENSG00000163661				15	0	0	16	5	23.8095
SMC4	0	genome.wustl.edu	37	3	160132281	160132281	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	160132281	160132281	A	C	SNP	SMC4	ENST00000344722	human	ensembl	74_37	+1	known	missense	c.1248	p.K416N	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810				34	0	0	16	6	27.2727
MECOM	0	genome.wustl.edu	37	3	168838939	168838939	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	168838939	168838939	C	T	SNP	MECOM	ENST00000494292	human	ensembl	74_37	-1	known	missense	c.1037	p.R346Q	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	MECOM	HGNC	ENSG00000085276				66	0	0	29	16	35.5556
TNIK	0	genome.wustl.edu	37	3	170784061	170784061	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	170784061	170784061	C	T	SNP	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	missense	c.3914	p.R1305Q	1.000	pfam_Citron,smart_Citron	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310				62	0	0	30	17	36.1702
MFN1	0	genome.wustl.edu	37	3	179095137	179095137	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	179095137	179095137	A	G	SNP	MFN1	ENST00000357390	human	ensembl	74_37	+1	known	missense	c.1103	p.H368R	0.058	NULL	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	MFN1	HGNC	ENSG00000171109				90	0	0	27	9	25
MCF2L2	0	genome.wustl.edu	37	3	182925470	182925470	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	182925470	182925470	C	A	SNP	MCF2L2	ENST00000328913	human	ensembl	74_37	-1	known	missense	c.2638	p.V880L	0.628	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2L2	HGNC	ENSG00000053524				108	0	0	50	19	27.5362
ABCC5	0	genome.wustl.edu	37	3	183660654	183660654	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	183660654	183660654	A	G	SNP	ABCC5	ENST00000334444	human	ensembl	74_37	-1	known	silent	c.3555	p.P1185	0.952	superfamily_P-loop_NTPase	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC5	HGNC	ENSG00000114770				103	0	0	57	12	17.3913
DVL3	0	genome.wustl.edu	37	3	183888273	183888273	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	183888273	183888273	G	A	SNP	DVL3	ENST00000313143	human	ensembl	74_37	+1	known	silent	c.1881	p.P627	0.600	pfam_Dishevelled_C-dom	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_fam,prints_Dishevelled_3	-	no_errors	DVL3	HGNC	ENSG00000161202				14	0	0	14	12	46.1538
PSMD2	0	genome.wustl.edu	37	3	184020266	184020266	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	184020266	184020266	G	A	SNP	PSMD2	ENST00000310118	human	ensembl	74_37	+1	known	missense	c.813	p.M271I	1.000	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn1	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn1	-	no_errors	PSMD2	HGNC	ENSG00000175166				51	0	0	22	19	46.3415
CLCN2	0	genome.wustl.edu	37	3	184072024	184072024	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	184072024	184072024	G	A	SNP	CLCN2	ENST00000265593	human	ensembl	74_37	-1	known	missense	c.1586	p.A529V	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated,prints_Cl-channel-2	-	no_errors	CLCN2	HGNC	ENSG00000114859				70	0	0	72	5	6.49351
DNAJB11	0	genome.wustl.edu	37	3	186299253	186299253	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	186299253	186299253	C	T	SNP	DNAJB11	ENST00000265028	human	ensembl	74_37	+1	known	missense	c.550	p.R184C	1.000	superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB11	HGNC	ENSG00000090520				124	0	0	65	41	38.6792
KCNH8	0	genome.wustl.edu	37	3	19436626	19436626	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	19436626	19436626	C	T	SNP	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	missense	c.1000	p.R334C	0.969	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960				168	0	0	51	31	37.8049
KCNH8	0	genome.wustl.edu	37	3	19479763	19479763	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	19479763	19479763	C	A	SNP	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	missense	c.1285	p.L429M	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960				137	0	0	91	40	30.5344
MUC4	0	genome.wustl.edu	37	3	195495938	195495938	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	195495938	195495938	T	C	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.13484	p.D4495G	0.471	pfam_Nidogen_extracell_dom,smart_Nidogen_extracell_dom	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				38	0	0	32	4	11.1111
PAK2	0	genome.wustl.edu	37	3	196533500	196533500	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	196533500	196533500	T	G	SNP	PAK2	ENST00000327134	human	ensembl	74_37	+1	known	missense	c.519	p.D173E	0.990	superfamily_WASP_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,superfamily_WASP_C,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom	-	no_errors	PAK2	HGNC	ENSG00000180370				83	0	0	52	17	24.6377
KAT2B	0	genome.wustl.edu	37	3	20167584	20167584	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	20167584	20167584	T	G	SNP	KAT2B	ENST00000263754	human	ensembl	74_37	+1	known	missense	c.1601	p.I534S	1.000	pirsf_Hist_acetylase_PCAF,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom	-	no_errors	KAT2B	HGNC	ENSG00000114166				15	0	0	8	10	55.5556
CNTN4	0	genome.wustl.edu	37	3	3067808	3067808	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	3067808	3067808	C	A	SNP	CNTN4	ENST00000397461	human	ensembl	74_37	+1	known	silent	c.1509	p.P503	0.870	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN4	HGNC	ENSG00000144619				52	0	0	26	2	7.14286
OSBPL10	0	genome.wustl.edu	37	3	31705669	31705669	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	31705669	31705669	T	C	SNP	OSBPL10	ENST00000396556	human	ensembl	74_37	-1	known	missense	c.2152	p.T718A	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL10	HGNC	ENSG00000144645				118	0	0	95	6	5.94059
GLB1	0	genome.wustl.edu	37	3	33038574	33038574	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	33038574	33038574	G	A	SNP	GLB1	ENST00000445488	human	ensembl	74_37	-1	known	missense	c.2141	p.P714L	0.044	NULL	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,prints_Glycoside_Hdrlase_35	-	no_errors	GLB1	HGNC	ENSG00000170266				110	0	0	54	35	39.3258
SCN5A	0	genome.wustl.edu	37	3	38640527	38640527	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	38640527	38640527	C	A	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.1905	p.E635D	0.974	pfam_DUF3451,prints_Na_channel_a5su	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				45	0	0	29	14	32.5581
TTC21A	0	genome.wustl.edu	37	3	39175776	39175776	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	39175776	39175776	C	T	SNP	TTC21A	ENST00000301819	human	ensembl	74_37	+1	known	missense	c.2843	p.A948V	0.070	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21A	HGNC	ENSG00000168026				249	0	0	173	10	5.46448
ZNF662	0	genome.wustl.edu	37	3	42956634	42956634	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	42956634	42956634	G	A	SNP	ZNF662	ENST00000328199	human	ensembl	74_37	+1	known	missense	c.1147	p.D383N	0.991	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF662	HGNC	ENSG00000182983				95	0	0	63	5	7.35294
LARS2	0	genome.wustl.edu	37	3	45561788	45561788	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	45561788	45561788	G	A	SNP	LARS2	ENST00000265537	human	ensembl	74_37	+1	known	silent	c.2292	p.S764	0.062	pfam_V/L/I-tRNA-synth_anticodon-bd,superfamily_tRNAsynth_1a_anticodon-bd,tigrfam_Leu-tRNA-ligase_bac/mito	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_V/L/I-tRNA-synth_anticodon-bd,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Val/Leu/Ile-tRNA-synth_edit,prints_Leu-tRNA-ligase_bac/mito,tigrfam_Leu-tRNA-ligase_bac/mito	-	no_errors	LARS2	HGNC	ENSG00000011376				81	0	0	31	22	41.5094
PTH1R	0	genome.wustl.edu	37	3	46940909	46940909	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	46940909	46940909	G	T	SNP	PTH1R	ENST00000313049	human	ensembl	74_37	+1	known	missense	c.951	p.E317D	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_parathyroid_rcpt	-	no_errors	PTH1R	HGNC	ENSG00000160801				58	0	0	24	21	46.6667
ITPR1	0	genome.wustl.edu	37	3	4709146	4709146	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	4709146	4709146	A	G	SNP	ITPR1	ENST00000302640	human	ensembl	74_37	+1	known	missense	c.1754	p.H585R	1.000	pfam_Ca-rel_channel,prints_InsP3_rcpt-bd	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995				33	0	0	29	9	23.6842
SCAP	0	genome.wustl.edu	37	3	47462067	47462067	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	47462067	47462067	G	A	SNP	SCAP	ENST00000265565	human	ensembl	74_37	-1	known	missense	c.1540	p.R514C	1.000	NULL	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650				23	0	0	20	12	37.5
PLXNB1	0	genome.wustl.edu	37	3	48464342	48464342	+	Silent	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	48464342	48464342	A	C	SNP	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	silent	c.1122	p.A374	0.943	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050				82	0	0	38	15	28.3019
CELSR3	0	genome.wustl.edu	37	3	48691331	48691331	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	48691331	48691331	C	T	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.5258	p.G1753D	0.939	pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				127	0	0	123	8	6.10687
ARIH2	0	genome.wustl.edu	37	3	49012281	49012281	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	49012281	49012281	A	G	SNP	ARIH2	ENST00000356401	human	ensembl	74_37	+1	known	missense	c.920	p.N307S	1.000	pfam_Znf_C6HC,smart_Znf_C6HC,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C6HC,smart_Znf_RING,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	ARIH2	HGNC	ENSG00000177479				114	0	0	92	6	6.12245
LAMB2	0	genome.wustl.edu	37	3	49159460	49159460	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	49159460	49159460	C	T	SNP	LAMB2	ENST00000305544	human	ensembl	74_37	-1	known	missense	c.4840	p.A1614T	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037				87	0	0	83	16	16.1616
DAG1	0	genome.wustl.edu	37	3	49568926	49568926	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	49568926	49568926	A	G	SNP	DAG1	ENST00000308775	human	ensembl	74_37	+1	known	missense	c.982	p.T328A	1.000	NULL	pfam_DAG1,superfamily_Alpha-dystroglycan_domain_2,superfamily_Cadherin-like,smart_Cadg	-	no_errors	DAG1	HGNC	ENSG00000173402				188	0	0	158	12	7.05882
BSN	0	genome.wustl.edu	37	3	49692496	49692496	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	49692496	49692496	A	T	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.5507	p.E1836V	1.000	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061				116	0	0	64	32	33.3333
MST1R	0	genome.wustl.edu	37	3	49936360	49936360	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	49936360	49936360	C	T	SNP	MST1R	ENST00000296474	human	ensembl	74_37	-1	known	silent	c.1488	p.Q496	1.000	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MST1R	HGNC	ENSG00000164078				114	0	0	122	8	6.15385
IFRD2	0	genome.wustl.edu	37	3	50325851	50325851	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	50325851	50325851	G	A	SNP	IFRD2	ENST00000336089	human	ensembl	74_37	-1	known	missense	c.1735	p.R579C	0.984	pfam_Interferon-rel_develop_reg_C	pfam_Interferon-rel_develop_reg_N,pfam_Interferon-rel_develop_reg_C,superfamily_ARM-type_fold	-	no_errors	IFRD2	HGNC	ENSG00000214706				26	0	0	22	10	31.25
IFRD2	0	genome.wustl.edu	37	3	50329820	50329820	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	50329820	50329820	C	T	SNP	IFRD2	ENST00000336089	human	ensembl	74_37	-1	known	silent	c.384	p.V128	1.000	NULL	pfam_Interferon-rel_develop_reg_N,pfam_Interferon-rel_develop_reg_C,superfamily_ARM-type_fold	-	no_errors	IFRD2	HGNC	ENSG00000214706				16	0	0	15	8	34.7826
CACNA2D2	0	genome.wustl.edu	37	3	50418199	50418199	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	50418199	50418199	G	A	SNP	CACNA2D2	ENST00000435965	human	ensembl	74_37	-1	known	silent	c.822	p.Y274	0.737	NULL	pfam_VWA_N,pfam_VDCC_a2/dsu,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D2	HGNC	ENSG00000007402				13	0	0	12	4	25
DNAH1	0	genome.wustl.edu	37	3	52425502	52425502	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	52425502	52425502	C	T	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	missense	c.9935	p.T3312M	0.183	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841				31	0	0	19	15	44.1176
NISCH	0	genome.wustl.edu	37	3	52526437	52526437	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	52526437	52526437	T	C	SNP	NISCH	ENST00000345716	human	ensembl	74_37	+1	known	missense	c.4454	p.L1485P	0.482	NULL	pfam_Phox,pfam_Leu-rich_rpt,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	NISCH	HGNC	ENSG00000010322				94	0	0	76	7	8.43373
WNT5A	0	genome.wustl.edu	37	3	55504317	55504317	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	55504317	55504317	C	T	SNP	WNT5A	ENST00000264634	human	ensembl	74_37	-1	known	missense	c.946	p.G316S	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt	-	no_errors	WNT5A	HGNC	ENSG00000114251				84	0	0	43	44	50.5747
FAM208A	0	genome.wustl.edu	37	3	56681220	56681220	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	56681220	56681220	C	T	SNP	FAM208A	ENST00000355628	human	ensembl	74_37	-1	known	silent	c.1545	p.Q515	0.567	NULL	pfam_DUF3715	-	no_errors	FAM208A	HGNC	ENSG00000163946				65	0	0	28	12	30
FLNB	0	genome.wustl.edu	37	3	58148890	58148890	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	58148890	58148890	C	A	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.7031	p.A2344D	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				69	0	0	37	22	37.2881
PSMD6	0	genome.wustl.edu	37	3	64004573	64004573	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	64004573	64004573	A	G	SNP	PSMD6	ENST00000295901	human	ensembl	74_37	-1	known	missense	c.638	p.L213P	1.000	pfam_26S_proteasome_reg_su-Rpn7	pfam_26S_proteasome_reg_su-Rpn7,pfam_PCI_dom,smart_PCI_dom	-	no_errors	PSMD6	HGNC	ENSG00000163636				120	0	0	51	12	19.0476
PRICKLE2	0	genome.wustl.edu	37	3	64145667	64145667	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	64145667	64145667	G	A	SNP	PRICKLE2	ENST00000295902	human	ensembl	74_37	-1	known	silent	c.345	p.R115	0.936	pfam_PET_domain	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE2	HGNC	ENSG00000163637				173	0	0	61	35	36.4583
MAGI1	0	genome.wustl.edu	37	3	65342547	65342547	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	65342547	65342547	G	A	SNP	MAGI1	ENST00000402939	human	ensembl	74_37	-1	known	missense	c.3895	p.R1299W	0.544	NULL	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI1	HGNC	ENSG00000151276				129	0	0	81	7	7.95455
LRIG1	0	genome.wustl.edu	37	3	66467592	66467592	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	66467592	66467592	C	T	SNP	LRIG1	ENST00000273261	human	ensembl	74_37	-1	known	missense	c.464	p.R155Q	0.990	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG1	HGNC	ENSG00000144749				254	1	0.392157	199	11	5.2381
FOXP1	0	genome.wustl.edu	37	3	71015081	71015081	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	71015081	71015081	C	T	SNP	FOXP1	ENST00000318789	human	ensembl	74_37	-1	known	missense	c.1849	p.E617K	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	-	no_errors	FOXP1	HGNC	ENSG00000114861				208	0	0	136	79	36.7442
PDZRN3	0	genome.wustl.edu	37	3	73433940	73433940	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	73433940	73433940	C	T	SNP	PDZRN3	ENST00000263666	human	ensembl	74_37	-1	known	missense	c.1777	p.A593T	0.994	NULL	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	PDZRN3	HGNC	ENSG00000121440				80	0	0	51	28	35.443
CRYBG3	0	genome.wustl.edu	37	3	97614817	97614817	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	97614817	97614817	A	G	SNP	CRYBG3	ENST00000182096	human	ensembl	74_37	+1	known	missense	c.1745	p.E582G	1.000	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBG3	HGNC	ENSG00000080200				63	0	0	23	14	37.8378
CAMK1	0	genome.wustl.edu	37	3	9799262	9799262	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	9799262	9799262	C	T	SNP	CAMK1	ENST00000256460	human	ensembl	74_37	-1	known	silent	c.1074	p.P358	0.016	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK1	HGNC	ENSG00000134072				64	0	0	73	10	12.0482
LOC101929271	0	genome.wustl.edu	37	4	100212106	100212106	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	100212106	100212106	G	A	SNP	LOC101929271	ENST00000500358	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.000	-	-	-	no_errors	RP11-696N14.1	Clone_based_vega_gene	ENSG00000246090				119	0	0	35	30	46.1538
FGFRL1	0	genome.wustl.edu	37	4	1018191	1018191	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	1018191	1018191	C	T	SNP	FGFRL1	ENST00000264748	human	ensembl	74_37	+1	known	missense	c.811	p.R271C	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FGFRL1	HGNC	ENSG00000127418				126	0	0	92	5	5.15464
SLC39A8	0	genome.wustl.edu	37	4	103228707	103228707	+	Silent	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	103228707	103228707	T	A	SNP	SLC39A8	ENST00000356736	human	ensembl	74_37	-1	known	silent	c.438	p.G146	0.131	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A8	HGNC	ENSG00000138821				149	0	0	74	50	40.3226
GSTCD	0	genome.wustl.edu	37	4	106744429	106744429	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	106744429	106744429	T	A	SNP	GSTCD	ENST00000360505	human	ensembl	74_37	+1	known	nonsense	c.1398	p.C466*	1.000	pfam_rRNA_ssu_MeTfrase_G,pfam_Small_mtfrase_dom	pfam_rRNA_ssu_MeTfrase_G,pfam_Small_mtfrase_dom,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	GSTCD	HGNC	ENSG00000138780				191	0	0	67	44	39.6396
COL25A1	0	genome.wustl.edu	37	4	109861694	109861694	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	109861694	109861694	C	T	SNP	COL25A1	ENST00000399132	human	ensembl	74_37	-1	known	splice_site	c.672+1	e9+1	1.000	-	-	-	no_errors	COL25A1	HGNC	ENSG00000188517				165	0	0	80	31	27.9279
SEC24B	0	genome.wustl.edu	37	4	110452568	110452568	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	110452568	110452568	C	T	SNP	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	missense	c.3280	p.R1094W	1.000	pfam_Sec23/24_helical_dom,superfamily_Sec23/24_helical_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802				71	0	0	39	20	33.8983
EGF	0	genome.wustl.edu	37	4	110908975	110908975	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	110908975	110908975	A	G	SNP	EGF	ENST00000265171	human	ensembl	74_37	+1	known	missense	c.2567	p.Q856R	0.994	pirsf_Pro-epidermal_GF,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Pro-epidermal_GF,pfam_LDLR_classB_rpt,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt	-	no_errors	EGF	HGNC	ENSG00000138798				130	0	0	33	29	46.7742
ENPEP	0	genome.wustl.edu	37	4	111397807	111397807	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	111397807	111397807	G	A	SNP	ENPEP	ENST00000265162	human	ensembl	74_37	+1	known	silent	c.237	p.P79	0.001	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC	ENSG00000138792				79	0	0	87	11	11.2245
ENPEP	0	genome.wustl.edu	37	4	111464190	111464190	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	111464190	111464190	G	A	SNP	ENPEP	ENST00000265162	human	ensembl	74_37	+1	known	missense	c.1964	p.R655H	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC	ENSG00000138792				141	0	0	37	17	31.4815
PITX2	0	genome.wustl.edu	37	4	111539810	111539810	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	111539810	111539810	T	C	SNP	PITX2	ENST00000306732	human	ensembl	74_37	-1	known	missense	c.446	p.K149R	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PITX2	HGNC	ENSG00000164093				138	0	0	72	54	42.8571
METTL14	0	genome.wustl.edu	37	4	119631419	119631419	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	119631419	119631419	C	T	SNP	METTL14	ENST00000388822	human	ensembl	74_37	+1	known	missense	c.1333	p.R445C	1.000	NULL	pfam_MT-A70-like,pfscan_MT-A70-like	-	no_errors	METTL14	HGNC	ENSG00000145388				66	0	0	33	14	29.7872
CTBP1-AS2	0	genome.wustl.edu	37	4	1244239	1244239	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	1244239	1244239	G	A	SNP	CTBP1-AS2	ENST00000578730	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CTBP1-AS2	HGNC	ENSG00000196810				22	0	0	14	11	44
FAT4	0	genome.wustl.edu	37	4	126241907	126241907	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	126241907	126241907	T	C	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	silent	c.4341	p.P1447	0.002	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				172	0	0	65	47	41.9643
PCDH10	0	genome.wustl.edu	37	4	134072933	134072933	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	134072933	134072933	G	A	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	silent	c.1638	p.R546	0.997	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650				103	0	0	73	37	33.6364
HHIP	0	genome.wustl.edu	37	4	145636526	145636526	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	145636526	145636526	G	T	SNP	HHIP	ENST00000296575	human	ensembl	74_37	+1	known	missense	c.1622	p.G541V	1.000	NULL	pfam_Folate_rcpt-like,superfamily_Quinoprot_gluc/sorb_DH,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HHIP	HGNC	ENSG00000164161				98	0	0	47	22	31.8841
FBXL5	0	genome.wustl.edu	37	4	15628520	15628520	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	15628520	15628520	T	A	SNP	FBXL5	ENST00000341285	human	ensembl	74_37	-1	known	missense	c.1100	p.D367V	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_F-box_dom,pfam_Leu-rich_rpt,superfamily_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL5	HGNC	ENSG00000118564				31	0	0	14	5	26.3158
GUCY1B3	0	genome.wustl.edu	37	4	156717621	156717621	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	156717621	156717621	C	A	SNP	GUCY1B3	ENST00000264424	human	ensembl	74_37	+1	known	nonsense	c.936	p.Y312*	1.000	pfam_Haem_no_assoc-bd	pfam_Haem_no_assoc-bd,pfam_A/G_cyclase,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1B3	HGNC	ENSG00000061918				47	0	0	22	11	33.3333
GRIA2	0	genome.wustl.edu	37	4	158233830	158233830	+	Splice_Site	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	158233830	158233830	G	T	SNP	GRIA2	ENST00000264426	human	ensembl	74_37	+1	known	splice_site	c.470-1	e4-1	1.000	-	-	-	no_errors	GRIA2	HGNC	ENSG00000120251				45	0	0	26	19	42.2222
RAPGEF2	0	genome.wustl.edu	37	4	160268152	160268152	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	160268152	160268152	T	C	SNP	RAPGEF2	ENST00000264431	human	ensembl	74_37	+1	known	splice_site	c.3229+2	e19+2	1.000	-	-	-	no_errors	RAPGEF2	HGNC	ENSG00000109756				84	0	0	78	5	6.0241
TENM3	0	genome.wustl.edu	37	4	183721137	183721137	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	183721137	183721137	C	T	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	missense	c.7733	p.T2578M	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336				13	0	0	11	6	35.2941
WWC2	0	genome.wustl.edu	37	4	184182199	184182199	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	184182199	184182199	A	C	SNP	WWC2	ENST00000448232	human	ensembl	74_37	+1	known	missense	c.1423	p.S475R	0.150	NULL	pfam_WW_dom,superfamily_C2_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWC2	HGNC	ENSG00000151718				41	0	0	24	17	41.4634
FAT1	0	genome.wustl.edu	37	4	187539004	187539004	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	187539004	187539004	G	A	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	silent	c.8736	p.N2912	0.727	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				80	0	0	39	17	30.3571
FAT1	0	genome.wustl.edu	37	4	187630248	187630248	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	187630248	187630248	A	G	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.734	p.V245A	0.999	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				168	0	0	137	8	5.51724
HAUS3	0	genome.wustl.edu	37	4	2240395	2240395	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	2240395	2240395	G	T	SNP	HAUS3	ENST00000243706	human	ensembl	74_37	-1	known	missense	c.1285	p.P429T	0.063	NULL	NULL	-	no_errors	HAUS3	HGNC	ENSG00000214367				84	0	0	34	15	30.6122
HAUS3	0	genome.wustl.edu	37	4	2240518	2240518	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	2240518	2240518	G	A	SNP	HAUS3	ENST00000243706	human	ensembl	74_37	-1	known	nonsense	c.1162	p.Q388*	0.981	NULL	NULL	-	no_errors	HAUS3	HGNC	ENSG00000214367				63	0	0	45	14	23.7288
SH3BP2	0	genome.wustl.edu	37	4	2824766	2824766	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	2824766	2824766	T	C	SNP	SH3BP2	ENST00000503393	human	ensembl	74_37	+1	known	splice_site	c.410+2	e3+2	1.000	-	-	-	no_errors	SH3BP2	HGNC	ENSG00000087266				34	0	0	19	4	17.3913
MFSD10	0	genome.wustl.edu	37	4	2933848	2933848	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	2933848	2933848	C	T	SNP	MFSD10	ENST00000503596	human	ensembl	74_37	-1	known	missense	c.623	p.R208Q	0.000	pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD10	HGNC	ENSG00000109736				27	0	0	17	16	48.4848
PCDH7	0	genome.wustl.edu	37	4	30921914	30921914	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	30921914	30921914	C	T	SNP	PCDH7	ENST00000543491	human	ensembl	74_37	+1	known	missense	c.3314	p.A1105V	1.000	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH7	HGNC	ENSG00000169851				81	0	0	80	7	8.04598
ARAP2	0	genome.wustl.edu	37	4	36115818	36115818	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	36115818	36115818	A	G	SNP	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	missense	c.4130	p.F1377S	1.000	pfam_Ras-assoc,pfscan_Ras-assoc	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365				177	0	0	68	40	37.037
YIPF7	0	genome.wustl.edu	37	4	44626737	44626737	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	44626737	44626737	A	G	SNP	YIPF7	ENST00000332990	human	ensembl	74_37	-1	known	silent	c.561	p.H187	0.270	pfam_Yip1	pfam_Yip1	-	no_errors	YIPF7	HGNC	ENSG00000177752				20	0	0	14	3	17.6471
FRYL	0	genome.wustl.edu	37	4	48567646	48567646	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	48567646	48567646	T	C	SNP	FRYL	ENST00000358350	human	ensembl	74_37	-1	known	missense	c.3232	p.S1078G	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRYL	HGNC	ENSG00000075539				57	0	0	29	6	17.1429
LRRC66	0	genome.wustl.edu	37	4	52861931	52861931	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	52861931	52861931	C	T	SNP	LRRC66	ENST00000343457	human	ensembl	74_37	-1	known	silent	c.1257	p.A419	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC66	HGNC	ENSG00000188993				184	0	0	98	22	18.3333
PDGFRA	0	genome.wustl.edu	37	4	55156584	55156584	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	55156584	55156584	C	T	SNP	PDGFRA	ENST00000257290	human	ensembl	74_37	+1	known	silent	c.2985	p.N995	0.998	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRA	HGNC	ENSG00000134853				143	0	0	81	41	33.6066
EVC2	0	genome.wustl.edu	37	4	5570350	5570350	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	5570350	5570350	C	T	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	silent	c.3378	p.S1126	0.000	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040				28	0	0	18	7	28
EVC2	0	genome.wustl.edu	37	4	5624286	5624286	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	5624286	5624286	G	A	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	missense	c.2479	p.R827C	0.560	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040				26	0	0	17	9	34.6154
TMEM165	0	genome.wustl.edu	37	4	56291672	56291672	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	56291672	56291672	G	A	SNP	TMEM165	ENST00000508561	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TMEM165	HGNC	ENSG00000134851				39	0	0	12	8	40
CCDC96	0	genome.wustl.edu	37	4	7043547	7043547	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	7043547	7043547	G	A	SNP	CCDC96	ENST00000310085	human	ensembl	74_37	-1	known	silent	c.1119	p.S373	0.000	NULL	NULL	-	no_errors	CCDC96	HGNC	ENSG00000173013				183	0	0	72	56	43.75
TADA2B	0	genome.wustl.edu	37	4	7056173	7056173	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	7056173	7056173	C	T	SNP	TADA2B	ENST00000310074	human	ensembl	74_37	+1	known	missense	c.655	p.R219W	0.998	pirsf_Transcriptional_adaptor_2	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_Znf_ZZ,smart_SANT/Myb,pirsf_Transcriptional_adaptor_2,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	TADA2B	HGNC	ENSG00000173011				170	0	0	98	64	39.5062
ANKRD17	0	genome.wustl.edu	37	4	73956980	73956980	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	73956980	73956980	G	T	SNP	ANKRD17	ENST00000358602	human	ensembl	74_37	-1	known	missense	c.6365	p.P2122H	1.000	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKRD17	HGNC	ENSG00000132466				158	1	0.628931	128	8	5.88235
FAM47E-STBD1	0	genome.wustl.edu	37	4	77230676	77230676	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	77230676	77230676	C	T	SNP	FAM47E-STBD1	ENST00000237642	human	ensembl	74_37	+1	known	silent	c.600	p.H200	0.000	NULL	pfam_CBM_fam20,superfamily_Carb-bd-like_fold,pfscan_CBM_fam20	-	no_errors	FAM47E-STBD1	HGNC	ENSG00000118804				62	0	0	50	5	9.09091
FRAS1	0	genome.wustl.edu	37	4	79295337	79295337	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	79295337	79295337	T	C	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	missense	c.3083	p.L1028S	0.136	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_EG-like_dom	pfam_Calx_beta,pfam_VWF_C,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_VWC_out,smart_VWF_C,smart_Furin_repeat,smart_EG-like_dom,smart_Calx_beta,pfscan_VWF_C	-	no_errors	FRAS1	HGNC	ENSG00000138759				124	0	0	89	6	6.31579
PLAC8	0	genome.wustl.edu	37	4	84028970	84028970	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	84028970	84028970	G	A	SNP	PLAC8	ENST00000311507	human	ensembl	74_37	-1	known	silent	c.105	p.S35	0.944	pfam_Uncharacterised_Cys-rich,tigrfam_Uncharacterised_Cys-rich	pfam_Uncharacterised_Cys-rich,tigrfam_Uncharacterised_Cys-rich	-	no_errors	PLAC8	HGNC	ENSG00000145287				86	0	0	42	15	26.3158
PTPN13	0	genome.wustl.edu	37	4	87684104	87684104	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	87684104	87684104	C	T	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	nonsense	c.3778	p.Q1260*	1.000	pirsf_Tyr_Pase_non-rcpt_typ-13	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629				55	0	0	32	20	38.4615
HERC6	0	genome.wustl.edu	37	4	89326076	89326076	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	89326076	89326076	C	T	SNP	HERC6	ENST00000264346	human	ensembl	74_37	+1	known	nonsense	c.1141	p.R381*	0.940	NULL	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC6	HGNC	ENSG00000138642				82	0	0	39	33	45.8333
HERC3	0	genome.wustl.edu	37	4	89588627	89588627	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	89588627	89588627	G	T	SNP	HERC3	ENST00000264345	human	ensembl	74_37	+1	known	missense	c.1431	p.M477I	0.998	NULL	pfam_Reg_chr_condens,pfam_HECT,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC3	HGNC	ENSG00000138641				37	0	0	8	5	38.4615
MMRN1	0	genome.wustl.edu	37	4	90830508	90830508	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	90830508	90830508	A	C	SNP	MMRN1	ENST00000264790	human	ensembl	74_37	+1	known	missense	c.705	p.K235N	0.004	pfam_EMI_domain,pfscan_EMI_domain	pfam_C1q,pfam_EMI_domain,pfam_EG-like_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MMRN1	HGNC	ENSG00000138722				72	0	0	29	5	14.7059
RAP1GDS1	0	genome.wustl.edu	37	4	99300202	99300202	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	99300202	99300202	T	C	SNP	RAP1GDS1	ENST00000339360	human	ensembl	74_37	+1	known	silent	c.399	p.G133	1.000	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	RAP1GDS1	HGNC	ENSG00000138698				95	0	0	46	22	32.3529
SLCO6A1	0	genome.wustl.edu	37	5	101834487	101834487	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	101834487	101834487	G	A	SNP	SLCO6A1	ENST00000379807	human	ensembl	74_37	-1	known	missense	c.62	p.P21L	0.000	NULL	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO6A1	HGNC	ENSG00000205359				259	0	0	137	69	33.4951
PPIP5K2	0	genome.wustl.edu	37	5	102465389	102465389	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	102465389	102465389	T	C	SNP	PPIP5K2	ENST00000358359	human	ensembl	74_37	+1	known	silent	c.96	p.D32	0.096	NULL	pfam_His_Pase_superF_clade-2	-	no_errors	PPIP5K2	HGNC	ENSG00000145725				63	0	0	17	12	41.3793
FER	0	genome.wustl.edu	37	5	108295005	108295005	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	108295005	108295005	T	C	SNP	FER	ENST00000281092	human	ensembl	74_37	+1	known	missense	c.1613	p.I538T	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,superfamily_Kinase-like_dom,pfscan_SH2	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_FCH_dom,superfamily_Kinase-like_dom,smart_FCH_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,pfscan_FCH_dom,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	FER	HGNC	ENSG00000151422				71	0	0	32	22	40.7407
KCNN2	0	genome.wustl.edu	37	5	113698500	113698500	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	113698500	113698500	G	A	SNP	KCNN2	ENST00000264773	human	ensembl	74_37	+1	known	missense	c.28	p.V10I	1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN2	HGNC	ENSG00000080709				31	0	0	26	13	33.3333
FEM1C	0	genome.wustl.edu	37	5	114878823	114878823	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	114878823	114878823	G	A	SNP	FEM1C	ENST00000274457	human	ensembl	74_37	-1	known	missense	c.368	p.A123V	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	FEM1C	HGNC	ENSG00000145780				98	0	0	45	21	31.8182
AQPEP	0	genome.wustl.edu	37	5	115323514	115323514	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	115323514	115323514	G	A	SNP	AQPEP	ENST00000357872	human	ensembl	74_37	+1	known	missense	c.983	p.R328H	0.998	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_gn	ENSG00000172901				71	0	0	31	17	35.4167
FTMT	0	genome.wustl.edu	37	5	121187725	121187725	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	121187725	121187725	C	T	SNP	FTMT	ENST00000321339	human	ensembl	74_37	+1	known	missense	c.67	p.R23C	0.000	NULL	pfam_Ferritin_DPS_dom,superfamily_Ferritin-like_SF,pfscan_Ferritin-like_diiron	-	no_errors	FTMT	HGNC	ENSG00000181867				57	0	0	26	16	38.0952
SHROOM1	0	genome.wustl.edu	37	5	132160980	132160980	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	132160980	132160980	T	C	SNP	SHROOM1	ENST00000378679	human	ensembl	74_37	-1	known	missense	c.853	p.M285V	0.000	NULL	pfam_ASD2,pfam_ASD1	-	no_errors	SHROOM1	HGNC	ENSG00000164403				39	0	0	17	12	41.3793
TCF7	0	genome.wustl.edu	37	5	133481935	133481935	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	133481935	133481935	G	A	SNP	TCF7	ENST00000342854	human	ensembl	74_37	+1	known	missense	c.1096	p.G366S	1.000	NULL	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7	HGNC	ENSG00000081059				260	0	0	130	89	40.6393
PHF15	0	genome.wustl.edu	37	5	133871564	133871564	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	133871564	133871564	G	A	SNP	PHF15	ENST00000395003	human	ensembl	74_37	+1	known	missense	c.17	p.R6Q	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF15	HGNC	ENSG00000043143				63	0	0	36	26	41.9355
C5orf24	0	genome.wustl.edu	37	5	134190673	134190673	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	134190673	134190673	C	T	SNP	C5orf24	ENST00000338051	human	ensembl	74_37	+1	known	missense	c.83	p.A28V	1.000	NULL	NULL	-	no_errors	C5orf24	HGNC	ENSG00000181904				203	0	0	117	62	34.6369
CATSPER3	0	genome.wustl.edu	37	5	134343728	134343728	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	134343728	134343728	G	A	SNP	CATSPER3	ENST00000282611	human	ensembl	74_37	+1	known	missense	c.574	p.A192T	0.796	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER3	HGNC	ENSG00000152705				131	0	0	95	7	6.86275
CXCL14	0	genome.wustl.edu	37	5	134910282	134910282	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	134910282	134910282	G	A	SNP	CXCL14	ENST00000337225	human	ensembl	74_37	-1	known	silent	c.300	p.N100	0.668	superfamily_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom	-	no_errors	CXCL14	HGNC	ENSG00000145824				66	0	0	15	13	46.4286
SPOCK1	0	genome.wustl.edu	37	5	136403466	136403466	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	136403466	136403466	C	T	SNP	SPOCK1	ENST00000282223	human	ensembl	74_37	-1	known	missense	c.527	p.C176Y	1.000	pfam_Kazal_dom,smart_Kazal_dom	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK1	HGNC	ENSG00000152377				166	0	0	47	33	41.25
TMEM173	0	genome.wustl.edu	37	5	138860962	138860962	+	RNA	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	138860962	138860962	C	A	SNP	TMEM173	ENST00000511850	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.207	-	-	-	no_errors	TMEM173	HGNC	ENSG00000184584				21	0	0	38	4	9.52381
NRG2	0	genome.wustl.edu	37	5	139260471	139260471	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	139260471	139260471	T	C	SNP	NRG2	ENST00000545385	human	ensembl	74_37	-1	known	missense	c.961	p.T321A	0.987	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_EG-like_dom,pfscan_Ig-like_dom	-	no_errors	NRG2	HGNC	ENSG00000158458				75	0	0	59	4	6.34921
APBB3	0	genome.wustl.edu	37	5	139941182	139941182	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	139941182	139941182	A	C	SNP	APBB3	ENST00000356738	human	ensembl	74_37	-1	known	missense	c.752	p.L251R	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_WW_dom	-	no_errors	APBB3	HGNC	ENSG00000113108				228	0	0	191	60	23.9044
PCDHA1	0	genome.wustl.edu	37	5	140167265	140167265	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140167265	140167265	G	A	SNP	PCDHA1	ENST00000504120	human	ensembl	74_37	+1	known	missense	c.1390	p.V464M	0.944	pfam_Cadherin,superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970				142	0	0	176	14	7.36842
PCDHA1	0	genome.wustl.edu	37	5	140167382	140167382	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140167382	140167382	G	A	SNP	PCDHA1	ENST00000504120	human	ensembl	74_37	+1	known	missense	c.1507	p.A503T	0.348	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970				136	0	0	137	9	6.16438
PCDHA5	0	genome.wustl.edu	37	5	140201490	140201490	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140201490	140201490	G	A	SNP	PCDHA5	ENST00000529859	human	ensembl	74_37	+1	known	missense	c.130	p.V44I	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA5	HGNC	ENSG00000204965				127	0	0	97	27	21.7742
PCDHA5	0	genome.wustl.edu	37	5	140202694	140202694	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140202694	140202694	C	T	SNP	PCDHA5	ENST00000529859	human	ensembl	74_37	+1	known	missense	c.1334	p.A445V	0.000	superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA5	HGNC	ENSG00000204965				182	1	0.546448	213	15	6.57895
PCDHA8	0	genome.wustl.edu	37	5	140222198	140222198	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140222198	140222198	G	A	SNP	PCDHA8	ENST00000531613	human	ensembl	74_37	+1	known	missense	c.1292	p.G431D	0.997	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962				181	0	0	129	91	41.3636
PCDHA9	0	genome.wustl.edu	37	5	140230226	140230226	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140230226	140230226	C	T	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	silent	c.2146	p.L716	0.975	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961				133	0	0	135	40	22.8571
PCDHA11	0	genome.wustl.edu	37	5	140249805	140249805	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140249805	140249805	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	missense	c.1117	p.V373M	0.994	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158				103	0	0	78	40	33.8983
PCDHA11	0	genome.wustl.edu	37	5	140250611	140250611	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140250611	140250611	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	silent	c.1923	p.S641	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158				98	0	0	137	10	6.80272
PCDHA12	0	genome.wustl.edu	37	5	140257063	140257063	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140257063	140257063	T	C	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.2006	p.L669P	0.169	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664				69	0	0	117	8	6.4
PCDHA13	0	genome.wustl.edu	37	5	140263628	140263628	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140263628	140263628	C	T	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	missense	c.1775	p.A592V	0.830	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389				163	0	0	211	14	6.22222
PCDHB2	0	genome.wustl.edu	37	5	140474401	140474401	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140474401	140474401	C	T	SNP	PCDHB2	ENST00000194155	human	ensembl	74_37	+1	known	silent	c.27	p.R9	0.001	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB2	HGNC	ENSG00000112852				78	0	0	43	27	38.5714
PCDHB6	0	genome.wustl.edu	37	5	140531688	140531688	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140531688	140531688	C	T	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.1850	p.A617V	0.995	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				80	0	0	60	38	38.7755
ENSG00000255622	0	genome.wustl.edu	37	5	140536946	140536946	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140536946	140536946	A	G	SNP	ENSG00000255622	ENST00000539533	human	ensembl	74_37	+1	known	missense	c.1370	p.Y457C	0.154	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB17	Uniprot_gn	ENSG00000255622				179	0	0	272	50	15.528
PCDHB8	0	genome.wustl.edu	37	5	140558574	140558574	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140558574	140558574	T	C	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	missense	c.959	p.I320T	0.081	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322				203	1	0.490196	161	10	5.84795
PCDHB12	0	genome.wustl.edu	37	5	140590002	140590002	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140590002	140590002	C	T	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	missense	c.1523	p.A508V	0.007	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328				189	0	0	192	100	34.2466
PCDHB14	0	genome.wustl.edu	37	5	140604218	140604218	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140604218	140604218	A	C	SNP	PCDHB14	ENST00000239449	human	ensembl	74_37	+1	known	missense	c.1141	p.M381L	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB14	HGNC	ENSG00000120327				125	0	0	98	20	16.9492
PCDHGA1	0	genome.wustl.edu	37	5	140710353	140710353	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140710353	140710353	A	G	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	silent	c.102	p.S34	0.001	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956				120	0	0	113	26	18.705
PCDHGA2	0	genome.wustl.edu	37	5	140720953	140720953	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140720953	140720953	G	A	SNP	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	silent	c.2415	p.T805	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853				66	0	0	33	30	47.619
PCDHGA3	0	genome.wustl.edu	37	5	140723665	140723665	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140723665	140723665	C	T	SNP	PCDHGA3	ENST00000253812	human	ensembl	74_37	+1	known	missense	c.65	p.T22M	0.102	smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245				299	0	0	135	92	40.5286
PCDHGA3	0	genome.wustl.edu	37	5	140725605	140725605	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140725605	140725605	C	T	SNP	PCDHGA3	ENST00000253812	human	ensembl	74_37	+1	known	missense	c.2005	p.P669S	0.998	smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245				70	0	0	75	11	12.7907
PCDHGA3	0	genome.wustl.edu	37	5	140725690	140725690	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140725690	140725690	T	C	SNP	PCDHGA3	ENST00000253812	human	ensembl	74_37	+1	known	missense	c.2090	p.V697A	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245				149	0	0	123	26	17.4497
PCDHGA3	0	genome.wustl.edu	37	5	140725741	140725741	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140725741	140725741	T	A	SNP	PCDHGA3	ENST00000253812	human	ensembl	74_37	+1	known	missense	c.2141	p.L714H	0.420	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245				180	0	0	148	26	14.9425
PCDHGB1	0	genome.wustl.edu	37	5	140731334	140731334	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140731334	140731334	G	A	SNP	PCDHGB1	ENST00000523390	human	ensembl	74_37	+1	known	missense	c.1507	p.V503M	0.168	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB1	HGNC	ENSG00000254221				103	0	0	63	42	40
PCDHGA11	0	genome.wustl.edu	37	5	140801232	140801232	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140801232	140801232	C	T	SNP	PCDHGA11	ENST00000398587	human	ensembl	74_37	+1	known	silent	c.438	p.H146	0.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873				28	0	0	21	13	38.2353
PCDHGB8P	0	genome.wustl.edu	37	5	140807735	140807735	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140807735	140807735	C	T	SNP	PCDHGB8P	ENST00000502926	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	PCDHGB8P	HGNC	ENSG00000248449				20	0	0	30	9	23.0769
GNPDA1	0	genome.wustl.edu	37	5	141384602	141384602	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	141384602	141384602	G	A	SNP	GNPDA1	ENST00000311337	human	ensembl	74_37	-1	known	silent	c.489	p.A163	0.998	pfam_Glc/Gal-6P_isomerase,tigrfam_Glucosamine6P_isomerase	pfam_Glc/Gal-6P_isomerase,tigrfam_Glucosamine6P_isomerase	-	no_errors	GNPDA1	HGNC	ENSG00000113552				41	0	0	19	7	26.9231
TRIO	0	genome.wustl.edu	37	5	14504592	14504592	+	Silent	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	14504592	14504592	C	G	SNP	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	silent	c.8502	p.R2834	0.800	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382				311	0	0	183	95	34.1727
LARS	0	genome.wustl.edu	37	5	145543919	145543919	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	145543919	145543919	T	A	SNP	LARS	ENST00000394434	human	ensembl	74_37	-1	known	missense	c.548	p.Y183F	1.000	tigrfam_Leu-tRNA-synth_Ia_arc/euk	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Cys-tRNA/MSH_ligase,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Val/Leu/Ile-tRNA-synth_edit,tigrfam_Leu-tRNA-synth_Ia_arc/euk	-	no_errors	LARS	HGNC	ENSG00000133706				170	0	0	60	44	42.3077
FBXO38	0	genome.wustl.edu	37	5	147821616	147821616	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	147821616	147821616	G	A	SNP	FBXO38	ENST00000340253	human	ensembl	74_37	+1	known	missense	c.3473	p.R1158H	1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO38	HGNC	ENSG00000145868				81	0	0	40	17	29.8246
SLC36A1	0	genome.wustl.edu	37	5	150847485	150847485	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	150847485	150847485	A	G	SNP	SLC36A1	ENST00000243389	human	ensembl	74_37	+1	known	missense	c.722	p.Q241R	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC36A1	HGNC	ENSG00000123643				51	0	0	27	23	46
SLC36A1	0	genome.wustl.edu	37	5	150859003	150859003	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	150859003	150859003	A	G	SNP	SLC36A1	ENST00000243389	human	ensembl	74_37	+1	known	missense	c.1112	p.E371G	0.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC36A1	HGNC	ENSG00000123643				97	0	0	69	5	6.75676
HAND1	0	genome.wustl.edu	37	5	153857481	153857481	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	153857481	153857481	C	T	SNP	HAND1	ENST00000231121	human	ensembl	74_37	-1	known	missense	c.88	p.G30S	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	HAND1	HGNC	ENSG00000113196				176	0	0	77	25	24.5098
FBXL7	0	genome.wustl.edu	37	5	15937067	15937067	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	15937067	15937067	C	T	SNP	FBXL7	ENST00000504595	human	ensembl	74_37	+1	known	silent	c.1248	p.S416	0.623	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Leu-rich_rpt,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL7	HGNC	ENSG00000183580				58	0	0	31	27	46.5517
GABRA1	0	genome.wustl.edu	37	5	161318019	161318019	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	161318019	161318019	G	A	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	nonsense	c.819	p.W273*	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355				80	0	0	35	23	39.6552
TENM2	0	genome.wustl.edu	37	5	167545304	167545304	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	167545304	167545304	C	T	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	silent	c.1821	p.C607	1.000	smart_EG-like_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934				187	0	0	146	54	27
DOCK2	0	genome.wustl.edu	37	5	169267806	169267806	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	169267806	169267806	C	T	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	missense	c.2749	p.R917W	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516				52	0	0	24	9	27.2727
UIMC1	0	genome.wustl.edu	37	5	176396164	176396164	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	176396164	176396164	A	T	SNP	UIMC1	ENST00000377219	human	ensembl	74_37	-1	known	missense	c.592	p.S198T	1.000	NULL	smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif	-	no_errors	UIMC1	HGNC	ENSG00000087206				70	0	0	86	5	5.49451
NSD1	0	genome.wustl.edu	37	5	176720831	176720831	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	176720831	176720831	A	G	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	splice_site	c.6464-2	e22-2	1.000	-	-	-	no_errors	NSD1	HGNC	ENSG00000165671				94	0	0	92	6	6.12245
LOC728554	0	genome.wustl.edu	37	5	177310670	177310670	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	177310670	177310670	G	A	SNP	LOC728554	ENST00000506672	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-423H2.1	Clone_based_vega_gene	ENSG00000170089				63	0	0	40	14	25.9259
PROP1	0	genome.wustl.edu	37	5	177420032	177420032	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	177420032	177420032	C	T	SNP	PROP1	ENST00000308304	human	ensembl	74_37	-1	known	missense	c.359	p.R120H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	PROP1	HGNC	ENSG00000175325				32	0	0	23	5	17.8571
NHP2	0	genome.wustl.edu	37	5	177580799	177580799	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	177580799	177580799	T	C	SNP	NHP2	ENST00000274606	human	ensembl	74_37	-1	known	missense	c.20	p.D7G	0.000	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45,prints_Ribosomal_L7Ae/L8/Nhp2,prints_H/ACA_rnp_Nhp2_euk	-	no_errors	NHP2	HGNC	ENSG00000145912				21	0	0	12	5	29.4118
ZNF354A	0	genome.wustl.edu	37	5	178139580	178139580	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	178139580	178139580	A	G	SNP	ZNF354A	ENST00000335815	human	ensembl	74_37	-1	known	silent	c.1299	p.T433	0.667	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF354A	HGNC	ENSG00000169131				115	0	0	50	32	39.0244
LOC101928445	0	genome.wustl.edu	37	5	179023396	179023396	+	RNA	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	179023396	179023396	G	T	SNP	LOC101928445	ENST00000500262	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-1379J22.2	Clone_based_vega_gene	ENSG00000244945				21	0	0	15	12	44.4444
CANX	0	genome.wustl.edu	37	5	179132741	179132741	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	179132741	179132741	C	T	SNP	CANX	ENST00000415618	human	ensembl	74_37	+1	known	missense	c.164	p.A55V	0.990	NULL	pfam_Calret/calnex,superfamily_ConA-like_lec_gl_sf,superfamily_Calreticulin/calnexin_P_dom,prints_Calret/calnex	-	no_errors	CANX	HGNC	ENSG00000127022				301	0	0	143	75	34.4037
SQSTM1	0	genome.wustl.edu	37	5	179260239	179260239	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	179260239	179260239	G	A	SNP	SQSTM1	ENST00000389805	human	ensembl	74_37	+1	known	missense	c.962	p.R321H	0.001	NULL	pfam_Znf_ZZ,pfam_OPR_PB1,superfamily_UBA-like,smart_OPR_PB1,smart_Znf_ZZ,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_ZZ	-	no_errors	SQSTM1	HGNC	ENSG00000161011				8	0	0	9	6	40
GFPT2	0	genome.wustl.edu	37	5	179762943	179762943	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	179762943	179762943	G	A	SNP	GFPT2	ENST00000253778	human	ensembl	74_37	-1	known	silent	c.225	p.S75	0.995	NULL	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT2	HGNC	ENSG00000131459				111	0	0	65	11	14.4737
CDH12	0	genome.wustl.edu	37	5	21751879	21751879	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	21751879	21751879	T	G	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	missense	c.2352	p.E784D	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162				116	0	0	61	30	32.967
IRX1	0	genome.wustl.edu	37	5	3599615	3599615	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	3599615	3599615	C	T	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	missense	c.553	p.L185F	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549				125	0	0	76	31	28.972
C5orf42	0	genome.wustl.edu	37	5	37115140	37115140	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	37115140	37115140	A	C	SNP	C5orf42	ENST00000425232	human	ensembl	74_37	-1	known	missense	c.9160	p.F3054V	0.023	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603				33	0	0	2	3	60
NDUFS4	0	genome.wustl.edu	37	5	52899287	52899287	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	52899287	52899287	T	C	SNP	NDUFS4	ENST00000296684	human	ensembl	74_37	+1	known	missense	c.104	p.L35S	0.973	NULL	pfam_NADH_UbQ_FeS_4_mit	-	no_errors	NDUFS4	HGNC	ENSG00000164258				65	0	0	44	11	20
KIAA0947	0	genome.wustl.edu	37	5	5464737	5464737	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	5464737	5464737	C	A	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	silent	c.5290	p.R1764	1.000	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151				14	0	0	14	8	36.3636
MAP3K1	0	genome.wustl.edu	37	5	56177588	56177588	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	56177588	56177588	G	A	SNP	MAP3K1	ENST00000399503	human	ensembl	74_37	+1	novel	missense	c.2561	p.R854H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015				114	0	0	72	5	6.49351
CEP72	0	genome.wustl.edu	37	5	637785	637785	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	637785	637785	G	A	SNP	CEP72	ENST00000264935	human	ensembl	74_37	+1	known	missense	c.1058	p.C353Y	0.005	NULL	smart_Leu-rich_rpt_typical-subtyp,smart_U2A'_phosphoprotein32A_C	-	no_errors	CEP72	HGNC	ENSG00000112877				60	0	0	29	15	34.0909
PAPD7	0	genome.wustl.edu	37	5	6746403	6746403	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	6746403	6746403	G	T	SNP	PAPD7	ENST00000230859	human	ensembl	74_37	+1	known	missense	c.572	p.G191V	1.000	pfam_PAP_assoc	pfam_PAP_assoc,pfam_Nucleotidyltransferase	-	no_errors	PAPD7	HGNC	ENSG00000112941				112	0	0	63	38	37.6238
FOXD1	0	genome.wustl.edu	37	5	72743584	72743584	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	72743584	72743584	C	A	SNP	FOXD1	ENST00000499003	human	ensembl	74_37	-1	known	missense	c.604	p.D202Y	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD1	HGNC	ENSG00000251493				110	0	0	82	50	37.8788
SV2C	0	genome.wustl.edu	37	5	75594678	75594678	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	75594678	75594678	C	T	SNP	SV2C	ENST00000502798	human	ensembl	74_37	+1	known	missense	c.1562	p.T521I	0.965	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2C	HGNC	ENSG00000122012				124	0	0	44	19	30.1587
S100Z	0	genome.wustl.edu	37	5	76171297	76171297	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	76171297	76171297	T	C	SNP	S100Z	ENST00000317593	human	ensembl	74_37	+1	known	missense	c.113	p.L38P	0.990	pfam_S100_Ca-bd_sub	pfam_S100_Ca-bd_sub,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	S100Z	HGNC	ENSG00000171643				133	0	0	57	34	37.3626
SNORA47	0	genome.wustl.edu	37	5	76376268	76376268	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	76376268	76376268	G	A	SNP	SNORA47	ENST00000458862	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.783	-	-	-	no_errors	SNORA47	HGNC	ENSG00000238961				53	0	0	36	15	29.4118
PDE8B	0	genome.wustl.edu	37	5	76709128	76709128	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	76709128	76709128	A	G	SNP	PDE8B	ENST00000264917	human	ensembl	74_37	+1	known	silent	c.1905	p.R635	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,pfam_PDEase_PDE8,pfam_Sig_transdc_resp-reg_receiver,pfam_PAS_fold,pfam_PAS_4,pfam_PAS_fold_3,superfamily_PAS,superfamily_CheY-like_superfamily,smart_PAS,smart_HD/PDEase_dom,pfscan_PAS,prints_PDEase,tigrfam_PAS	-	no_errors	PDE8B	HGNC	ENSG00000113231				76	0	0	50	21	29.5775
CMYA5	0	genome.wustl.edu	37	5	79028254	79028254	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	79028254	79028254	G	T	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	missense	c.3666	p.Q1222H	0.869	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309				16	0	0	13	17	56.6667
ZFYVE16	0	genome.wustl.edu	37	5	79734457	79734457	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	79734457	79734457	A	G	SNP	ZFYVE16	ENST00000338008	human	ensembl	74_37	+1	known	silent	c.1953	p.Q651	0.058	pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE16	HGNC	ENSG00000039319				77	0	0	58	5	7.93651
ATP6AP1L	0	genome.wustl.edu	37	5	81608638	81608638	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	81608638	81608638	A	G	SNP	ATP6AP1L	ENST00000380167	human	ensembl	74_37	+1	known	missense	c.340	p.S114G	0.553	NULL	NULL	-	no_errors	ATP6AP1L	HGNC	ENSG00000205464				84	0	0	74	5	6.32911
VCAN	0	genome.wustl.edu	37	5	82815503	82815503	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	82815503	82815503	C	T	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.1378	p.L460F	0.082	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				114	0	0	64	34	34.6939
GPR98	0	genome.wustl.edu	37	5	90087050	90087050	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	90087050	90087050	C	T	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	nonsense	c.14404	p.R4802*	0.112	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				24	0	0	18	7	28
GPR98	0	genome.wustl.edu	37	5	90106235	90106235	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	90106235	90106235	A	G	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.15158	p.E5053G	1.000	pfam_Calx_beta,smart_Calx_beta	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				33	0	0	21	12	36.3636
MCTP1	0	genome.wustl.edu	37	5	94253672	94253672	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	94253672	94253672	C	T	SNP	MCTP1	ENST00000515393	human	ensembl	74_37	-1	known	missense	c.1279	p.G427S	0.000	NULL	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_C2_dom	-	no_errors	MCTP1	HGNC	ENSG00000175471				66	0	0	15	15	50
ARSK	0	genome.wustl.edu	37	5	94901771	94901771	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	94901771	94901771	C	T	SNP	ARSK	ENST00000380009	human	ensembl	74_37	+1	known	missense	c.196	p.R66C	0.980	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSK	HGNC	ENSG00000164291				55	0	0	14	10	41.6667
SPATA9	0	genome.wustl.edu	37	5	95011302	95011302	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	95011302	95011302	A	G	SNP	SPATA9	ENST00000274432	human	ensembl	74_37	-1	known	silent	c.192	p.A64	0.031	NULL	NULL	-	no_errors	SPATA9	HGNC	ENSG00000145757				70	0	0	35	18	33.9623
CAST	0	genome.wustl.edu	37	5	96101027	96101027	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	96101027	96101027	A	G	SNP	CAST	ENST00000395813	human	ensembl	74_37	+1	known	missense	c.2035	p.K679E	1.000	pfam_Prot_inh_calpain	pfam_Prot_inh_calpain	-	no_errors	CAST	HGNC	ENSG00000153113				61	0	0	41	5	10.8696
PRDM13	0	genome.wustl.edu	37	6	100061025	100061025	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	100061025	100061025	C	T	SNP	PRDM13	ENST00000369215	human	ensembl	74_37	+1	known	missense	c.514	p.H172Y	1.000	NULL	smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM13	HGNC	ENSG00000112238				50	0	0	45	21	31.8182
LACE1	0	genome.wustl.edu	37	6	108677980	108677980	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	108677980	108677980	G	T	SNP	LACE1	ENST00000368977	human	ensembl	74_37	+1	known	nonsense	c.604	p.E202*	1.000	pfam_ATPase_AFG1-like,superfamily_P-loop_NTPase	pfam_ATPase_AFG1-like,superfamily_P-loop_NTPase	-	no_errors	LACE1	HGNC	ENSG00000135537				49	0	0	56	4	6.66667
ZBTB24	0	genome.wustl.edu	37	6	109803084	109803084	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	109803084	109803084	C	T	SNP	ZBTB24	ENST00000230122	human	ensembl	74_37	-1	known	missense	c.146	p.R49Q	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB24	HGNC	ENSG00000112365				130	1	0.763359	85	21	19.8113
CDC40	0	genome.wustl.edu	37	6	110550125	110550125	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	110550125	110550125	A	G	SNP	CDC40	ENST00000307731	human	ensembl	74_37	+1	known	missense	c.1508	p.K503R	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CDC40	HGNC	ENSG00000168438				47	0	0	37	3	7.5
REV3L	0	genome.wustl.edu	37	6	111632452	111632452	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	111632452	111632452	C	T	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	missense	c.8615	p.R2872H	1.000	pfam_DNA-dir_DNA_pol_B_multi_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413				118	0	0	66	59	47.2
NEDD9	0	genome.wustl.edu	37	6	11190484	11190484	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	11190484	11190484	C	T	SNP	NEDD9	ENST00000379446	human	ensembl	74_37	-1	known	missense	c.1618	p.D540N	1.000	pfam_Serine_rich	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NEDD9	HGNC	ENSG00000111859				177	0	0	146	10	6.41026
MCM9	0	genome.wustl.edu	37	6	119238766	119238766	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	119238766	119238766	G	A	SNP	MCM9	ENST00000316316	human	ensembl	74_37	-1	known	silent	c.864	p.F288	1.000	smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,prints_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase	-	no_errors	MCM9	HGNC	ENSG00000111877				129	0	0	83	8	8.79121
ENPP3	0	genome.wustl.edu	37	6	132014691	132014691	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	132014691	132014691	C	T	SNP	ENPP3	ENST00000357639	human	ensembl	74_37	+1	known	nonsense	c.1339	p.R447*	1.000	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom	-	no_errors	ENPP3	HGNC	ENSG00000154269				120	0	0	77	32	29.3578
VNN1	0	genome.wustl.edu	37	6	133005621	133005621	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	133005621	133005621	T	C	SNP	VNN1	ENST00000367928	human	ensembl	74_37	-1	known	silent	c.1212	p.K404	0.019	pirsf_Biotinidase_euk	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	-	no_errors	VNN1	HGNC	ENSG00000112299				93	0	0	63	12	16
SLC2A12	0	genome.wustl.edu	37	6	134323146	134323146	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	134323146	134323146	C	T	SNP	SLC2A12	ENST00000275230	human	ensembl	74_37	-1	known	silent	c.1689	p.E563	1.000	NULL	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt	-	no_errors	SLC2A12	HGNC	ENSG00000146411				57	0	0	58	4	6.45161
TXLNB	0	genome.wustl.edu	37	6	139569028	139569028	+	Silent	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	139569028	139569028	T	G	SNP	TXLNB	ENST00000358430	human	ensembl	74_37	-1	known	silent	c.1096	p.R366	1.000	pfam_Taxilin_fam	pfam_Taxilin_fam	-	no_errors	TXLNB	HGNC	ENSG00000164440				93	0	0	62	4	6.06061
LTV1	0	genome.wustl.edu	37	6	144184652	144184652	+	Silent	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	144184652	144184652	T	A	SNP	LTV1	ENST00000367576	human	ensembl	74_37	+1	known	silent	c.1416	p.G472	0.783	NULL	pfam_LTV	-	no_errors	LTV1	HGNC	ENSG00000135521				55	0	0	59	6	9.23077
SAMD5	0	genome.wustl.edu	37	6	147885588	147885588	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	147885588	147885588	G	A	SNP	SAMD5	ENST00000367474	human	ensembl	74_37	+1	known	missense	c.518	p.R173H	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD5	HGNC	ENSG00000203727				138	0	0	95	26	21.4876
KATNA1	0	genome.wustl.edu	37	6	149953934	149953934	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	149953934	149953934	T	C	SNP	KATNA1	ENST00000335647	human	ensembl	74_37	-1	known	missense	c.281	p.E94G	1.000	NULL	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	KATNA1	HGNC	ENSG00000186625				58	0	0	51	9	15
SYNE1	0	genome.wustl.edu	37	6	152676066	152676066	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	152676066	152676066	C	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.10654	p.V3552M	0.017	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				192	0	0	137	59	30.102
FBXO5	0	genome.wustl.edu	37	6	153296041	153296041	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	153296041	153296041	C	A	SNP	FBXO5	ENST00000229758	human	ensembl	74_37	-1	known	splice_site	c.818+1	e2+1	1.000	-	-	-	no_errors	FBXO5	HGNC	ENSG00000112029				91	0	0	49	13	20.9677
JARID2	0	genome.wustl.edu	37	6	15410470	15410470	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	15410470	15410470	A	G	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	missense	c.197	p.D66G	1.000	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				136	0	0	92	5	5.15464
RSPH3	0	genome.wustl.edu	37	6	159420643	159420643	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	159420643	159420643	G	T	SNP	RSPH3	ENST00000252655	human	ensembl	74_37	-1	known	silent	c.366	p.T122	0.000	NULL	pfam_Radial_spoke_3	-	no_errors	RSPH3	HGNC	ENSG00000130363				139	1	0.714286	145	30	17.1429
LPAL2	0	genome.wustl.edu	37	6	160921912	160921912	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	160921912	160921912	C	T	SNP	LPAL2	ENST00000335388	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.860	-	-	-	no_errors	LPAL2	HGNC	ENSG00000213071				222	0	0	147	92	38.4937
LPA	0	genome.wustl.edu	37	6	160999616	160999616	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	160999616	160999616	C	T	SNP	LPA	ENST00000316300	human	ensembl	74_37	-1	known	silent	c.4410	p.S1470	0.000	superfamily_Kringle-like	pfam_Kringle,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	LPA	HGNC	ENSG00000198670				141	0	0	94	25	21.0084
RPS6KA2	0	genome.wustl.edu	37	6	166952165	166952165	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	166952165	166952165	G	T	SNP	RPS6KA2	ENST00000510118	human	ensembl	74_37	-1	known	silent	c.282	p.S94	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA2	HGNC	ENSG00000071242				120	0	0	79	36	31.3043
DLL1	0	genome.wustl.edu	37	6	170592536	170592536	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	170592536	170592536	G	A	SNP	DLL1	ENST00000366756	human	ensembl	74_37	-1	known	nonsense	c.1831	p.Q611*	0.985	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	DLL1	HGNC	ENSG00000198719				198	0	0	169	10	5.58659
KIF13A	0	genome.wustl.edu	37	6	17817374	17817374	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	17817374	17817374	C	T	SNP	KIF13A	ENST00000259711	human	ensembl	74_37	-1	known	missense	c.1877	p.R626Q	1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13A	HGNC	ENSG00000137177				77	0	0	39	26	40
SCGN	0	genome.wustl.edu	37	6	25665221	25665221	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	25665221	25665221	C	T	SNP	SCGN	ENST00000377961	human	ensembl	74_37	+1	known	silent	c.297	p.R99	0.476	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	SCGN	HGNC	ENSG00000079689				81	0	0	39	22	36.0656
BTN3A1	0	genome.wustl.edu	37	6	26413635	26413635	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	26413635	26413635	A	G	SNP	BTN3A1	ENST00000289361	human	ensembl	74_37	+1	known	silent	c.1257	p.K419	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTN3A1	HGNC	ENSG00000026950				134	0	0	104	7	6.30631
HIST1H1B	0	genome.wustl.edu	37	6	27834922	27834922	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	27834922	27834922	G	A	SNP	HIST1H1B	ENST00000331442	human	ensembl	74_37	-1	known	missense	c.386	p.A129V	0.805	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1B	HGNC	ENSG00000184357				260	0	0	198	18	8.33333
ZSCAN9	0	genome.wustl.edu	37	6	28200820	28200820	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	28200820	28200820	G	A	SNP	ZSCAN9	ENST00000252207	human	ensembl	74_37	+1	known	missense	c.1049	p.R350H	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN9	HGNC	ENSG00000137185				44	0	0	25	18	41.8605
SERPINB6	0	genome.wustl.edu	37	6	2953378	2953378	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	2953378	2953378	A	G	SNP	SERPINB6	ENST00000335686	human	ensembl	74_37	-1	known	missense	c.473	p.L158S	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB6	HGNC	ENSG00000124570				385	0	0	289	109	27.3869
GABBR1	0	genome.wustl.edu	37	6	29577082	29577082	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	29577082	29577082	C	T	SNP	GABBR1	ENST00000377034	human	ensembl	74_37	-1	known	missense	c.1783	p.V595I	1.000	prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Sushi_SCR_CCP,superfamily_Peripla_BP_I,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,pfscan_Sushi_SCR_CCP,pfscan_GPCR_3_C	-	no_errors	GABBR1	HGNC	ENSG00000204681				71	0	0	32	28	46.6667
ZFP57	0	genome.wustl.edu	37	6	29641137	29641137	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	29641137	29641137	G	A	SNP	ZFP57	ENST00000488757	human	ensembl	74_37	-1	known	missense	c.751	p.R251C	0.825	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP57	HGNC	ENSG00000204644				117	0	0	78	53	40.458
HLA-L	0	genome.wustl.edu	37	6	30228254	30228254	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	30228254	30228254	C	T	SNP	HLA-L	ENST00000463348	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	HLA-L	HGNC	ENSG00000243753				67	0	0	84	5	5.61798
NRM	0	genome.wustl.edu	37	6	30658014	30658014	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	30658014	30658014	C	T	SNP	NRM	ENST00000259953	human	ensembl	74_37	-1	known	missense	c.140	p.R47H	0.043	NULL	pfam_NnrU	-	no_errors	NRM	HGNC	ENSG00000137404				42	0	0	33	13	28.2609
MDC1	0	genome.wustl.edu	37	6	30670606	30670606	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	30670606	30670606	C	T	SNP	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	missense	c.5914	p.D1972N	0.999	superfamily_BRCT_dom	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337				137	0	0	137	9	6.16438
PSORS1C1	0	genome.wustl.edu	37	6	31097424	31097424	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	31097424	31097424	T	C	SNP	PSORS1C1	ENST00000259881	human	ensembl	74_37	+1	known	splice_site	c.13+2	e1+2	0.006	-	-	-	no_errors	PSORS1C1	HGNC	ENSG00000204540				76	0	0	54	6	10
HLA-C	0	genome.wustl.edu	37	6	31239405	31239405	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	31239405	31239405	A	G	SNP	HLA-C	ENST00000383329	human	ensembl	74_37	-1	known	missense	c.314	p.L105P	0.001	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,prints_MHC_I_a	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-C	HGNC	ENSG00000204525				82	0	0	73	6	7.59494
NOTCH4	0	genome.wustl.edu	37	6	32169930	32169930	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	32169930	32169930	G	A	SNP	NOTCH4	ENST00000375023	human	ensembl	74_37	-1	known	silent	c.3678	p.D1226	0.954	pirsf_Notch,pfam_Notch_dom,superfamily_Notch_dom,smart_Notch_dom,pfscan_Notch_dom	pirsf_Notch,pfam_EG-like_dom,pfam_Ankyrin_rpt,pfam_EGF-like_Ca-bd_dom,pfam_Notch_dom,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_4,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH4	HGNC	ENSG00000204301				131	0	0	119	11	8.46154
HLA-DMB	0	genome.wustl.edu	37	6	32904940	32904940	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	32904940	32904940	T	C	SNP	HLA-DMB	ENST00000416244	human	ensembl	74_37	-1	known	missense	c.631	p.M211V	0.000	NULL	pfam_Ig_C1-set,pfam_MHC_II_b_N,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DMB	HGNC	ENSG00000242574				104	0	0	58	19	24.6753
SLC39A7	0	genome.wustl.edu	37	6	33169607	33169607	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	33169607	33169607	G	A	SNP	SLC39A7	ENST00000374675	human	ensembl	74_37	+1	known	missense	c.497	p.R166H	1.000	pfam_ZIP	pfam_ZIP,prints_Kininogen	-	no_errors	SLC39A7	HGNC	ENSG00000112473				139	0	0	74	35	32.1101
ITPR3	0	genome.wustl.edu	37	6	33661475	33661475	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	33661475	33661475	T	C	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	missense	c.7778	p.M2593T	1.000	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				37	0	0	35	5	12.5
SCUBE3	0	genome.wustl.edu	37	6	35205683	35205683	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	35205683	35205683	C	A	SNP	SCUBE3	ENST00000394681	human	ensembl	74_37	+1	known	silent	c.765	p.T255	0.987	smart_EG-like_dom,prints_Thrombomodulin	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Thrombomodulin	-	no_errors	SCUBE3	HGNC	ENSG00000146197				175	0	0	93	52	35.8621
LHFPL5	0	genome.wustl.edu	37	6	35782386	35782386	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	35782386	35782386	G	A	SNP	LHFPL5	ENST00000360215	human	ensembl	74_37	+1	known	missense	c.476	p.R159H	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL5	HGNC	ENSG00000197753				111	0	0	89	5	5.31915
MAPK13	0	genome.wustl.edu	37	6	36099077	36099077	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	36099077	36099077	A	C	SNP	MAPK13	ENST00000211287	human	ensembl	74_37	+1	known	missense	c.149	p.K50T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_p38,prints_MAPK_JNK	-	no_errors	MAPK13	HGNC	ENSG00000156711				96	0	0	99	7	6.60377
C6orf222	0	genome.wustl.edu	37	6	36291215	36291215	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	36291215	36291215	C	T	SNP	C6orf222	ENST00000437635	human	ensembl	74_37	-1	known	silent	c.1326	p.A442	0.556	NULL	NULL	-	no_errors	C6orf222	HGNC	ENSG00000189325				301	0	0	142	61	30.0493
SRSF3	0	genome.wustl.edu	37	6	36566642	36566642	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	36566642	36566642	C	T	SNP	SRSF3	ENST00000373715	human	ensembl	74_37	+1	known	missense	c.223	p.R75C	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF3	HGNC	ENSG00000112081				119	0	0	96	7	6.79612
GLO1	0	genome.wustl.edu	37	6	38670752	38670752	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	38670752	38670752	T	C	SNP	GLO1	ENST00000373365	human	ensembl	74_37	-1	known	missense	c.79	p.T27A	1.000	tigrfam_Glyoxalase_1	pfam_Glyas_Fos-R_dOase_dom,tigrfam_Glyoxalase_1	-	no_errors	GLO1	HGNC	ENSG00000124767				40	0	0	34	18	34.6154
DNAH8	0	genome.wustl.edu	37	6	38791451	38791451	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	38791451	38791451	T	C	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	silent	c.3183	p.L1061	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				52	0	0	14	18	56.25
MOCS1	0	genome.wustl.edu	37	6	39877590	39877590	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	39877590	39877590	C	T	SNP	MOCS1	ENST00000340692	human	ensembl	74_37	-1	known	missense	c.1091	p.R364Q	0.999	pfam_Mob_synth_C,tigrfam_MoaA	pfam_Mopterin_CF_biosynth-C_dom,pfam_Mob_synth_C,pfam_rSAM,superfamily_Mopterin_CF_biosynth-C_dom,smart_Elp3/MiaB/NifB,tigrfam_MoaA,tigrfam_Mo_CF_biosynth-C	-	no_errors	MOCS1	HGNC	ENSG00000124615				179	0	0	88	55	38.4615
IRF4	0	genome.wustl.edu	37	6	398884	398884	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	398884	398884	G	A	SNP	IRF4	ENST00000380956	human	ensembl	74_37	+1	known	missense	c.694	p.G232R	0.985	NULL	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF4	HGNC	ENSG00000137265				67	0	0	15	11	42.3077
TREML1	0	genome.wustl.edu	37	6	41121642	41121642	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	41121642	41121642	G	A	SNP	TREML1	ENST00000426005	human	ensembl	74_37	-1	known	missense	c.230	p.T77M	0.000	pfam_Ig_V-set	pfam_Ig_V-set	-	no_errors	TREML1	HGNC	ENSG00000161911				70	0	0	38	33	46.4789
MRPS10	0	genome.wustl.edu	37	6	42176060	42176060	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	42176060	42176060	T	C	SNP	MRPS10	ENST00000053468	human	ensembl	74_37	-1	known	silent	c.573	p.T191	0.000	NULL	pfam_Ribosomal_S10_dom,superfamily_Ribosomal_S10_dom	-	no_errors	MRPS10	HGNC	ENSG00000048544				318	0	0	114	77	40.3141
KLC4	0	genome.wustl.edu	37	6	43039913	43039913	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	43039913	43039913	C	A	SNP	KLC4	ENST00000259708	human	ensembl	74_37	+1	known	missense	c.1462	p.L488M	1.000	smart_TPR_repeat	pfam_Rabaptin_Rab5-bd_dom,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Kinesin_light	-	no_errors	KLC4	HGNC	ENSG00000137171				121	0	0	67	5	6.94444
CUL9	0	genome.wustl.edu	37	6	43154719	43154719	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	43154719	43154719	C	T	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	missense	c.1273	p.R425C	1.000	pfam_CPH_domain	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659				72	0	0	31	30	49.1803
CUL9	0	genome.wustl.edu	37	6	43166454	43166454	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	43166454	43166454	C	T	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	silent	c.2911	p.L971	0.896	superfamily_ARM-type_fold	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659				209	0	0	162	14	7.95455
ZNF318	0	genome.wustl.edu	37	6	43310600	43310600	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	43310600	43310600	A	G	SNP	ZNF318	ENST00000361428	human	ensembl	74_37	-1	known	silent	c.3090	p.N1030	0.958	NULL	smart_Znf_U1	-	no_errors	ZNF318	HGNC	ENSG00000171467				55	0	0	37	4	9.7561
ABCC10	0	genome.wustl.edu	37	6	43403984	43403984	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	43403984	43403984	A	G	SNP	ABCC10	ENST00000372530	human	ensembl	74_37	+1	known	missense	c.1874	p.K625R	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC10	HGNC	ENSG00000124574				143	0	0	68	23	25.2747
SUPT3H	0	genome.wustl.edu	37	6	45333006	45333006	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	45333006	45333006	A	G	SNP	SUPT3H	ENST00000306867	human	ensembl	74_37	-1	known	silent	c.33	p.T11	0.832	NULL	pfam_TFIID-18,superfamily_Histone-fold	-	no_errors	SUPT3H	HGNC	ENSG00000196284				89	0	0	47	12	20.339
RUNX2	0	genome.wustl.edu	37	6	45515026	45515026	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	45515026	45515026	T	C	SNP	RUNX2	ENST00000352853	human	ensembl	74_37	+1	known	missense	c.1754	p.V585A	1.000	pfam_RunxI_C_dom	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX2	HGNC	ENSG00000124813				146	0	0	95	9	8.65385
MEP1A	0	genome.wustl.edu	37	6	46802479	46802479	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	46802479	46802479	G	A	SNP	MEP1A	ENST00000230588	human	ensembl	74_37	+1	known	missense	c.1774	p.D592N	1.000	pirsf_Pept_M12A_Meprin,pfam_MATH,superfamily_TRAF-like,pfscan_MATH	pirsf_Pept_M12A_Meprin,pfam_Peptidase_M12A,pfam_MATH,pfam_MAM_dom,pfam_EG-like_dom,superfamily_TRAF-like,superfamily_ConA-like_lec_gl_sf,smart_Peptidase_Metallo,smart_MAM_dom,smart_MATH,prints_Peptidase_M12A,prints_MAM_dom,pfscan_EG-like_dom,pfscan_MATH,pfscan_MAM_dom	-	no_errors	MEP1A	HGNC	ENSG00000112818				103	0	0	33	16	32.6531
DEFB113	0	genome.wustl.edu	37	6	49936542	49936542	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	49936542	49936542	T	C	SNP	DEFB113	ENST00000398718	human	ensembl	74_37	-1	known	missense	c.97	p.R33G	0.617	NULL	NULL	-	no_errors	DEFB113	HGNC	ENSG00000214642				34	0	0	27	3	10
GCLC	0	genome.wustl.edu	37	6	53364900	53364900	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	53364900	53364900	C	T	SNP	GCLC	ENST00000229416	human	ensembl	74_37	-1	known	missense	c.1645	p.V549M	1.000	pfam_GCS	pfam_GCS	-	no_errors	GCLC	HGNC	ENSG00000001084				64	0	0	61	7	10.2941
FAM83B	0	genome.wustl.edu	37	6	54806576	54806576	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	54806576	54806576	G	A	SNP	FAM83B	ENST00000306858	human	ensembl	74_37	+1	known	missense	c.2807	p.R936H	1.000	NULL	pfam_DUF1669	-	no_errors	FAM83B	HGNC	ENSG00000168143				103	0	0	69	6	8
PRIM2	0	genome.wustl.edu	37	6	57472369	57472369	+	RNA	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	57472369	57472369	C	A	SNP	PRIM2	ENST00000389488	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PRIM2	HGNC	ENSG00000146143				67	0	0	52	8	13.3333
F13A1	0	genome.wustl.edu	37	6	6266932	6266932	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	6266932	6266932	G	A	SNP	F13A1	ENST00000264870	human	ensembl	74_37	-1	known	missense	c.430	p.R144W	0.999	pfam_Transglutaminase_N,superfamily_Ig_E-set	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	F13A1	HGNC	ENSG00000124491				91	0	0	44	37	45.679
LY86	0	genome.wustl.edu	37	6	6654835	6654835	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	6654835	6654835	C	T	SNP	LY86	ENST00000230568	human	ensembl	74_37	+1	known	missense	c.464	p.A155V	0.999	pfam_ML_dom,superfamily_Ig_E-set,smart_ML_dom	pfam_ML_dom,superfamily_Ig_E-set,smart_ML_dom	-	no_errors	LY86	HGNC	ENSG00000112799				50	0	0	20	10	33.3333
ENSG00000211530	0	genome.wustl.edu	37	6	72294850	72294850	+	RNA	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	72294850	72294850	A	G	SNP	ENSG00000211530	ENST00000390196	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.555	-	-	-	no_errors	AL354933.1	Clone_based_ensembl_gene	ENSG00000211530				74	0	0	59	44	42.7184
RREB1	0	genome.wustl.edu	37	6	7247433	7247433	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	7247433	7247433	C	T	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.4750	p.R1584W	0.418	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				46	0	0	30	13	30.2326
RIMS1	0	genome.wustl.edu	37	6	72892670	72892670	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	72892670	72892670	A	G	SNP	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	missense	c.1496	p.D499G	1.000	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841				12	0	0	12	4	25
COL12A1	0	genome.wustl.edu	37	6	75831103	75831103	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	75831103	75831103	A	G	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.7001	p.I2334T	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				134	0	0	50	58	53.7037
COL12A1	0	genome.wustl.edu	37	6	75848669	75848669	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	75848669	75848669	G	A	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.4966	p.P1656S	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				112	0	0	50	13	20.6349
DSP	0	genome.wustl.edu	37	6	7585773	7585773	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	7585773	7585773	G	A	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.8278	p.A2760T	0.901	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				130	0	0	160	39	19.598
COL12A1	0	genome.wustl.edu	37	6	75862092	75862092	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	75862092	75862092	A	G	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	silent	c.3672	p.R1224	0.793	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				63	0	0	57	4	6.55738
FILIP1	0	genome.wustl.edu	37	6	76024861	76024861	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	76024861	76024861	A	G	SNP	FILIP1	ENST00000237172	human	ensembl	74_37	-1	known	silent	c.687	p.N229	0.516	pfam_Cortactin-binding_p2_N	pfam_Cortactin-binding_p2_N,prints_Tropomyosin	-	no_errors	FILIP1	HGNC	ENSG00000118407				74	0	0	39	18	31.5789
HTR1B	0	genome.wustl.edu	37	6	78172447	78172447	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	78172447	78172447	A	G	SNP	HTR1B	ENST00000369947	human	ensembl	74_37	-1	known	missense	c.674	p.I225T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT1B_rcpt,prints_5HT_rcpt,prints_ADR_fam	-	no_errors	HTR1B	HGNC	ENSG00000135312				55	0	0	80	19	19.1919
FAM46A	0	genome.wustl.edu	37	6	82459685	82459685	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	82459685	82459685	A	G	SNP	FAM46A	ENST00000369754	human	ensembl	74_37	-1	known	silent	c.1113	p.Y371	1.000	pfam_DUF1693	pfam_DUF1693	-	no_errors	FAM46A	HGNC	ENSG00000112773				77	0	0	25	27	51.9231
DOPEY1	0	genome.wustl.edu	37	6	83828616	83828616	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	83828616	83828616	C	T	SNP	DOPEY1	ENST00000349129	human	ensembl	74_37	+1	known	missense	c.790	p.P264S	1.000	pfam_Dopey_N,superfamily_ARM-type_fold	pfam_Dopey_N,superfamily_ARM-type_fold	-	no_errors	DOPEY1	HGNC	ENSG00000083097				152	0	0	126	8	5.97015
KIAA1009	0	genome.wustl.edu	37	6	84930881	84930881	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	84930881	84930881	A	T	SNP	KIAA1009	ENST00000403245	human	ensembl	74_37	-1	known	missense	c.66	p.D22E	1.000	NULL	NULL	-	no_errors	KIAA1009	HGNC	ENSG00000135315				42	0	0	43	17	28.3333
SYNCRIP	0	genome.wustl.edu	37	6	86324688	86324688	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	86324688	86324688	G	A	SNP	SYNCRIP	ENST00000369622	human	ensembl	74_37	-1	known	missense	c.1658	p.A553V	1.000	tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	SYNCRIP	HGNC	ENSG00000135316				241	0	0	317	17	5.08982
ZNF292	0	genome.wustl.edu	37	6	87966824	87966824	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	87966824	87966824	A	G	SNP	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	silent	c.3477	p.S1159	0.938	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994				52	0	0	23	18	43.9024
MMS22L	0	genome.wustl.edu	37	6	97613299	97613299	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	97613299	97613299	G	A	SNP	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	missense	c.3044	p.P1015L	0.995	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263				39	0	0	35	41	53.9474
NYAP1	0	genome.wustl.edu	37	7	100084511	100084511	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	100084511	100084511	G	A	SNP	NYAP1	ENST00000423930	human	ensembl	74_37	+1	known	missense	c.136	p.V46M	0.981	NULL	NULL	-	no_errors	NYAP1	HGNC	ENSG00000166924				13	0	0	9	3	25
MOSPD3	0	genome.wustl.edu	37	7	100212592	100212592	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	100212592	100212592	G	A	SNP	MOSPD3	ENST00000223054	human	ensembl	74_37	+1	known	missense	c.614	p.S205N	1.000	NULL	pfam_MSP_dom,superfamily_PapD-like,pfscan_MSP_dom	-	no_errors	MOSPD3	HGNC	ENSG00000106330				199	0	0	120	36	23.0769
ZAN	0	genome.wustl.edu	37	7	100369551	100369551	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	100369551	100369551	A	G	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.5333	p.D1778G	0.001	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839				49	0	0	23	15	39.4737
ACHE	0	genome.wustl.edu	37	7	100491090	100491090	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	100491090	100491090	C	A	SNP	ACHE	ENST00000302913	human	ensembl	74_37	-1	known	missense	c.764	p.R255M	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	ACHE	HGNC	ENSG00000087085				64	0	0	39	37	48.6842
ORAI2	0	genome.wustl.edu	37	7	102087351	102087351	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	102087351	102087351	C	A	SNP	ORAI2	ENST00000356387	human	ensembl	74_37	+1	known	missense	c.617	p.P206H	0.996	pfam_CRAC_channel	pfam_CRAC_channel	-	no_errors	ORAI2	HGNC	ENSG00000160991				38	0	0	34	21	38.1818
RELN	0	genome.wustl.edu	37	7	103123374	103123374	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	103123374	103123374	C	T	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.10226	p.R3409H	1.000	NULL	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				110	1	0.900901	49	27	35.5263
LHFPL3	0	genome.wustl.edu	37	7	103969331	103969331	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	103969331	103969331	C	T	SNP	LHFPL3	ENST00000535008	human	ensembl	74_37	+1	known	missense	c.104	p.A35V	1.000	NULL	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL3	HGNC	ENSG00000187416				56	0	0	47	32	40.5063
COG5	0	genome.wustl.edu	37	7	106876963	106876963	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	106876963	106876963	G	A	SNP	COG5	ENST00000297135	human	ensembl	74_37	-1	known	missense	c.2116	p.R706C	1.000	NULL	pfam_Cog5	-	no_errors	COG5	HGNC	ENSG00000164597				115	0	0	55	19	25.6757
LAMB1	0	genome.wustl.edu	37	7	107615527	107615527	+	Silent	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	107615527	107615527	A	C	SNP	LAMB1	ENST00000222399	human	ensembl	74_37	-1	known	silent	c.1386	p.P462	0.998	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Prefoldin,superfamily_t-SNARE,superfamily_P-loop_NTPase,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB1	HGNC	ENSG00000091136				51	0	0	28	3	9.67742
LRRN3	0	genome.wustl.edu	37	7	110762969	110762969	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	110762969	110762969	T	C	SNP	LRRN3	ENST00000308478	human	ensembl	74_37	+1	known	silent	c.141	p.Y47	0.990	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN3	HGNC	ENSG00000173114				146	0	0	93	5	5.10204
THSD7A	0	genome.wustl.edu	37	7	11445994	11445994	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	11445994	11445994	G	A	SNP	THSD7A	ENST00000423059	human	ensembl	74_37	-1	known	silent	c.4170	p.D1390	0.790	smart_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108				115	0	0	68	19	21.8391
THSD7A	0	genome.wustl.edu	37	7	11464332	11464332	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	11464332	11464332	C	T	SNP	THSD7A	ENST00000423059	human	ensembl	74_37	-1	known	missense	c.3374	p.R1125Q	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108				219	0	0	100	43	30.0699
TES	0	genome.wustl.edu	37	7	115890281	115890281	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	115890281	115890281	T	A	SNP	TES	ENST00000358204	human	ensembl	74_37	+1	known	missense	c.433	p.Y145N	1.000	pfam_PET_domain	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	TES	HGNC	ENSG00000135269				96	0	0	60	31	34.0659
KCND2	0	genome.wustl.edu	37	7	120385856	120385856	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	120385856	120385856	A	G	SNP	KCND2	ENST00000331113	human	ensembl	74_37	+1	known	missense	c.1490	p.Q497R	1.000	pfam_K_chnl_volt-dep_Kv4_C	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.2,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND2	HGNC	ENSG00000184408				66	0	0	26	15	36.5854
RNF148	0	genome.wustl.edu	37	7	122342486	122342486	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	122342486	122342486	G	A	SNP	RNF148	ENST00000434824	human	ensembl	74_37	-1	known	missense	c.319	p.R107C	0.882	pfam_Protease-assoc_domain	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF148	HGNC	ENSG00000235631				187	0	0	81	62	43.3566
PAX4	0	genome.wustl.edu	37	7	127251690	127251690	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	127251690	127251690	A	G	SNP	PAX4	ENST00000341640	human	ensembl	74_37	-1	known	missense	c.788	p.L263P	0.312	NULL	pfam_Paired_dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX4	HGNC	ENSG00000106331				106	1	0.934579	83	20	19.4175
ENSG00000242902	0	genome.wustl.edu	37	7	128491458	128491458	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	128491458	128491458	G	A	SNP	ENSG00000242902	ENST00000469965	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-309L24.2	Clone_based_vega_gene	ENSG00000242902				84	0	0	54	21	28
CALD1	0	genome.wustl.edu	37	7	134618718	134618718	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	134618718	134618718	C	T	SNP	CALD1	ENST00000361675	human	ensembl	74_37	+1	novel	nonsense	c.1198	p.Q400*	0.092	pfam_Caldesmon_LSP	pfam_Caldesmon_LSP,prints_Caldesmon	-	no_errors	CALD1	HGNC	ENSG00000122786				59	0	0	72	6	7.69231
KIAA1549	0	genome.wustl.edu	37	7	138601572	138601572	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	138601572	138601572	C	T	SNP	KIAA1549	ENST00000422774	human	ensembl	74_37	-1	known	missense	c.2800	p.D934N	0.000	NULL	NULL	-	no_errors	KIAA1549	HGNC	ENSG00000122778				32	0	0	22	15	40.5405
TTC26	0	genome.wustl.edu	37	7	138845785	138845785	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	138845785	138845785	C	T	SNP	TTC26	ENST00000474035	human	ensembl	74_37	+1	novel	missense	c.809	p.P270L	0.000	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC26	HGNC	ENSG00000105948				48	0	0	18	11	37.931
MKRN1	0	genome.wustl.edu	37	7	140155024	140155024	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	140155024	140155024	C	T	SNP	MKRN1	ENST00000463142	human	ensembl	74_37	-1	putative	missense	c.65	p.R22H	0.972	NULL	NULL	-	no_errors	MKRN1	HGNC	ENSG00000133606				163	0	0	86	30	25.8621
DENND2A	0	genome.wustl.edu	37	7	140223218	140223218	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	140223218	140223218	C	T	SNP	DENND2A	ENST00000275884	human	ensembl	74_37	-1	known	missense	c.2554	p.D852N	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2A	HGNC	ENSG00000146966				45	0	0	35	7	16.6667
MGAM	0	genome.wustl.edu	37	7	141783208	141783208	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	141783208	141783208	A	G	SNP	MGAM	ENST00000475668	human	ensembl	74_37	+1	putative	missense	c.6376	p.T2126A	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335				31	0	0	9	4	30.7692
OR9A2	0	genome.wustl.edu	37	7	142723327	142723327	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	142723327	142723327	C	T	SNP	OR9A2	ENST00000350513	human	ensembl	74_37	-1	known	missense	c.893	p.R298Q	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9A2	HGNC	ENSG00000179468				118	0	0	72	35	32.7103
EPHA1	0	genome.wustl.edu	37	7	143091335	143091335	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	143091335	143091335	C	A	SNP	EPHA1	ENST00000275815	human	ensembl	74_37	-1	known	missense	c.2454	p.E818D	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,superfamily_SAM/pointed,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA1	HGNC	ENSG00000146904				170	0	0	118	8	6.34921
OR2A5	0	genome.wustl.edu	37	7	143748294	143748294	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	143748294	143748294	C	A	SNP	OR2A5	ENST00000408906	human	ensembl	74_37	+1	known	missense	c.800	p.P267H	0.975	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2A5	HGNC	ENSG00000221836				146	0	0	131	8	5.7554
ZNF777	0	genome.wustl.edu	37	7	149129956	149129956	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	149129956	149129956	C	T	SNP	ZNF777	ENST00000247930	human	ensembl	74_37	-1	known	silent	c.1407	p.P469	0.436	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453				24	0	0	15	3	16.6667
KRBA1	0	genome.wustl.edu	37	7	149430469	149430469	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	149430469	149430469	C	T	SNP	KRBA1	ENST00000255992	human	ensembl	74_37	+1	known	missense	c.2423	p.A808V	0.897	NULL	NULL	-	no_errors	KRBA1	HGNC	ENSG00000133619				31	0	0	35	5	12.5
KRBA1	0	genome.wustl.edu	37	7	149430489	149430489	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	149430489	149430489	C	T	SNP	KRBA1	ENST00000255992	human	ensembl	74_37	+1	known	missense	c.2443	p.R815W	0.002	NULL	NULL	-	no_errors	KRBA1	HGNC	ENSG00000133619				19	0	0	26	3	10.3448
SSPO	0	genome.wustl.edu	37	7	149509077	149509077	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	149509077	149509077	G	A	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				57	0	0	47	27	36.4865
ZNF862	0	genome.wustl.edu	37	7	149559064	149559064	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	149559064	149559064	G	A	SNP	ZNF862	ENST00000223210	human	ensembl	74_37	+1	known	missense	c.2815	p.D939N	0.804	NULL	pfam_Krueppel-associated_box,pfam_HATC_dom_C,superfamily_Krueppel-associated_box,superfamily_RNaseH-like_dom,smart_Krueppel-associated_box,smart_Znf_TTF,pfscan_Krueppel-associated_box	-	no_errors	ZNF862	HGNC	ENSG00000106479				205	0	0	122	73	37.4359
REPIN1	0	genome.wustl.edu	37	7	150069094	150069094	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	150069094	150069094	G	A	SNP	REPIN1	ENST00000489432	human	ensembl	74_37	+1	known	missense	c.935	p.R312H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	REPIN1	HGNC	ENSG00000214022				85	0	0	39	16	29.0909
GIMAP8	0	genome.wustl.edu	37	7	150174636	150174636	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	150174636	150174636	G	A	SNP	GIMAP8	ENST00000307271	human	ensembl	74_37	+1	known	missense	c.1766	p.R589H	0.000	pfam_AIG1,superfamily_P-loop_NTPase	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP8	HGNC	ENSG00000171115				129	0	0	78	45	36.5854
NOS3	0	genome.wustl.edu	37	7	150698665	150698665	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	150698665	150698665	A	G	SNP	NOS3	ENST00000297494	human	ensembl	74_37	+1	known	missense	c.1462	p.T488A	0.004	pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS3	HGNC	ENSG00000164867				366	0	0	200	52	20.6349
SLC4A2	0	genome.wustl.edu	37	7	150771577	150771577	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	150771577	150771577	T	C	SNP	SLC4A2	ENST00000413384	human	ensembl	74_37	+1	known	splice_site	c.2880+2	e17+2	1.000	-	-	-	no_errors	SLC4A2	HGNC	ENSG00000164889				81	0	0	60	20	25
ASB10	0	genome.wustl.edu	37	7	150878271	150878271	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	150878271	150878271	C	T	SNP	ASB10	ENST00000422024	human	ensembl	74_37	-1	known	missense	c.994	p.A332T	0.005	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB10	HGNC	ENSG00000146926				45	0	0	21	20	48.7805
KMT2C	0	genome.wustl.edu	37	7	151884806	151884806	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	151884806	151884806	T	C	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	missense	c.4787	p.D1596G	0.906	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				105	0	0	47	29	38.1579
RBM33	0	genome.wustl.edu	37	7	155537713	155537713	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	155537713	155537713	G	A	SNP	RBM33	ENST00000401878	human	ensembl	74_37	+1	known	missense	c.2396	p.R799H	1.000	NULL	smart_RRM_dom	-	no_errors	RBM33	HGNC	ENSG00000184863				30	0	0	8	4	33.3333
MEOX2	0	genome.wustl.edu	37	7	15725656	15725656	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	15725656	15725656	C	T	SNP	MEOX2	ENST00000262041	human	ensembl	74_37	-1	known	silent	c.372	p.P124	0.306	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	MEOX2	HGNC	ENSG00000106511				22	0	0	21	9	30
ESYT2	0	genome.wustl.edu	37	7	158529777	158529777	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	158529777	158529777	G	A	SNP	ESYT2	ENST00000251527	human	ensembl	74_37	-1	known	silent	c.2442	p.H814	0.847	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	ESYT2	HGNC	ENSG00000117868				166	0	0	90	19	17.4312
TMEM184A	0	genome.wustl.edu	37	7	1587535	1587535	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	1587535	1587535	C	T	SNP	TMEM184A	ENST00000297477	human	ensembl	74_37	-1	known	silent	c.855	p.P285	0.012	pfam_Ost-alpha	pfam_Ost-alpha	-	no_errors	TMEM184A	HGNC	ENSG00000164855				8	0	0	14	4	22.2222
TWIST1	0	genome.wustl.edu	37	7	19156656	19156656	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	19156656	19156656	C	T	SNP	TWIST1	ENST00000242261	human	ensembl	74_37	-1	known	missense	c.289	p.G97S	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TWIST1	HGNC	ENSG00000122691				17	0	0	10	5	33.3333
MAD1L1	0	genome.wustl.edu	37	7	2020096	2020096	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	2020096	2020096	G	A	SNP	MAD1L1	ENST00000265854	human	ensembl	74_37	-1	known	silent	c.1497	p.D499	0.000	pfam_Mad1	pfam_Mad1	-	no_errors	MAD1L1	HGNC	ENSG00000002822				24	0	0	21	4	16
ABCB5	0	genome.wustl.edu	37	7	20767944	20767944	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	20767944	20767944	C	T	SNP	ABCB5	ENST00000258738	human	ensembl	74_37	+1	known	silent	c.1398	p.T466	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846				174	0	0	65	25	27.7778
CDCA7L	0	genome.wustl.edu	37	7	21985416	21985416	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	21985416	21985416	A	G	SNP	CDCA7L	ENST00000406877	human	ensembl	74_37	-1	known	silent	c.7	p.L3	0.897	NULL	pfam_Znf-4CXXC_R1	-	no_errors	CDCA7L	HGNC	ENSG00000164649				62	0	0	40	5	11.1111
IGF2BP3	0	genome.wustl.edu	37	7	23352017	23352017	+	Silent	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	23352017	23352017	A	T	SNP	IGF2BP3	ENST00000258729	human	ensembl	74_37	-1	known	silent	c.1704	p.A568	0.990	NULL	pfam_KH_dom_type_1,pfam_RRM_dom,smart_RRM_dom,smart_KH_dom,pfscan_KH_dom_type_1,pfscan_RRM_dom	-	no_errors	IGF2BP3	HGNC	ENSG00000136231				164	0	0	63	25	28.4091
BRAT1	0	genome.wustl.edu	37	7	2577869	2577869	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	2577869	2577869	T	C	SNP	BRAT1	ENST00000340611	human	ensembl	74_37	-1	known	missense	c.2300	p.Q767R	0.466	NULL	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	BRAT1	HGNC	ENSG00000106009				38	0	0	37	5	11.9048
TRIL	0	genome.wustl.edu	37	7	28996376	28996376	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	28996376	28996376	C	T	SNP	TRIL	ENST00000322982	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TRIL	HGNC	ENSG00000176734				71	0	0	77	5	6.09756
NOD1	0	genome.wustl.edu	37	7	30492472	30492472	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	30492472	30492472	G	T	SNP	NOD1	ENST00000222823	human	ensembl	74_37	-1	known	silent	c.561	p.T187	0.000	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD1	HGNC	ENSG00000106100				84	0	0	53	35	39.7727
NOD1	0	genome.wustl.edu	37	7	30492520	30492520	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	30492520	30492520	A	G	SNP	NOD1	ENST00000222823	human	ensembl	74_37	-1	known	silent	c.513	p.N171	0.617	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD1	HGNC	ENSG00000106100				98	0	0	74	13	14.9425
CRHR2	0	genome.wustl.edu	37	7	30695543	30695543	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	30695543	30695543	C	A	SNP	CRHR2	ENST00000348438	human	ensembl	74_37	-1	known	missense	c.998	p.R333M	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF2_rcpt,prints_GPCR_2_diuretic_rcpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	CRHR2	HGNC	ENSG00000106113				147	0	0	110	8	6.77966
PDE1C	0	genome.wustl.edu	37	7	31829827	31829827	+	RNA	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	31829827	31829827	T	C	SNP	PDE1C	ENST00000479980	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.972	-	-	-	no_errors	PDE1C	HGNC	ENSG00000154678				91	0	0	17	5	22.7273
SEPT7	0	genome.wustl.edu	37	7	35913333	35913333	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	35913333	35913333	C	T	SNP	SEPT7	ENST00000399034	human	ensembl	74_37	+1	known	missense	c.463	p.P155S	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin,prints_Septin7	-	no_errors	SEPT7	HGNC	ENSG00000122545				58	0	0	13	8	38.0952
EEPD1	0	genome.wustl.edu	37	7	36193947	36193947	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	36193947	36193947	T	C	SNP	EEPD1	ENST00000242108	human	ensembl	74_37	+1	known	missense	c.14	p.L5P	1.000	NULL	pfam_HhH_motif,pfam_Endo/exonuclease/phosphatase,pfam_GspK,superfamily_Endo/exonuclease/phosphatase,superfamily_RuvA_2-like,smart_Hlx-hairpin-Hlx_DNA-bd_motif,tigrfam_Competence_ComEA_HhH	-	no_errors	EEPD1	HGNC	ENSG00000122547				30	0	0	33	13	28.2609
KIAA0895	0	genome.wustl.edu	37	7	36366483	36366483	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	36366483	36366483	G	A	SNP	KIAA0895	ENST00000297063	human	ensembl	74_37	-1	known	silent	c.1449	p.T483	0.050	pfam_DUF1704	pfam_DUF1704	-	no_errors	KIAA0895	HGNC	ENSG00000164542				108	1	0.917431	29	31	51.6667
SDK1	0	genome.wustl.edu	37	7	4050672	4050672	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	4050672	4050672	G	A	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.2206	p.A736T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				62	0	0	29	18	38.2979
SDK1	0	genome.wustl.edu	37	7	4169604	4169604	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	4169604	4169604	C	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.4004	p.T1335M	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				88	0	0	62	49	44.1441
SDK1	0	genome.wustl.edu	37	7	4218216	4218216	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	4218216	4218216	C	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.5096	p.A1699V	0.999	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				113	0	0	109	8	6.83761
HECW1	0	genome.wustl.edu	37	7	43590143	43590143	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	43590143	43590143	C	T	SNP	HECW1	ENST00000395891	human	ensembl	74_37	+1	known	missense	c.4348	p.R1450C	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW1	HGNC	ENSG00000002746				27	0	0	25	12	32.4324
BLVRA	0	genome.wustl.edu	37	7	43843448	43843448	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	43843448	43843448	T	C	SNP	BLVRA	ENST00000265523	human	ensembl	74_37	+1	known	splice_site	c.632+2	e6+2	1.000	-	-	-	no_errors	BLVRA	HGNC	ENSG00000106605				84	0	0	82	20	19.6078
LINC00957	0	genome.wustl.edu	37	7	44078881	44078881	+	RNA	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	44078881	44078881	A	G	SNP	LINC00957	ENST00000416824	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.111	-	-	-	no_errors	LINC00957	HGNC	ENSG00000235314				8	0	0	12	6	33.3333
OGDH	0	genome.wustl.edu	37	7	44713507	44713507	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	44713507	44713507	G	A	SNP	OGDH	ENST00000222673	human	ensembl	74_37	+1	known	missense	c.755	p.R252Q	1.000	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_DH_E1,pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	OGDH	HGNC	ENSG00000105953				80	0	0	50	31	38.2716
AP5Z1	0	genome.wustl.edu	37	7	4821214	4821214	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	4821214	4821214	C	T	SNP	AP5Z1	ENST00000348624	human	ensembl	74_37	+1	known	silent	c.195	p.C65	0.000	NULL	NULL	-	no_errors	AP5Z1	HGNC	ENSG00000242802				46	0	0	30	7	18.9189
MMD2	0	genome.wustl.edu	37	7	4947179	4947179	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	4947179	4947179	G	T	SNP	MMD2	ENST00000404774	human	ensembl	74_37	-1	known	missense	c.661	p.L221M	0.520	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	MMD2	HGNC	ENSG00000136297				94	0	0	93	5	5.10204
FBXL18	0	genome.wustl.edu	37	7	5541068	5541068	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	5541068	5541068	C	T	SNP	FBXL18	ENST00000453700	human	ensembl	74_37	-1	known	missense	c.832	p.A278T	1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXL18	HGNC	ENSG00000155034				30	0	0	33	8	19.5122
FBXL18	0	genome.wustl.edu	37	7	5541070	5541070	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	5541070	5541070	C	G	SNP	FBXL18	ENST00000453700	human	ensembl	74_37	-1	known	missense	c.830	p.G277A	0.998	NULL	pfam_F-box_dom,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXL18	HGNC	ENSG00000155034				33	0	0	33	8	19.5122
AIMP2	0	genome.wustl.edu	37	7	6063002	6063002	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	6063002	6063002	C	T	SNP	AIMP2	ENST00000223029	human	ensembl	74_37	+1	known	missense	c.643	p.R215C	0.721	NULL	superfamily_Glutathione-S-Trfase_C-like	-	no_errors	AIMP2	HGNC	ENSG00000106305				79	0	0	64	4	5.88235
USP42	0	genome.wustl.edu	37	7	6193579	6193579	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	6193579	6193579	C	T	SNP	USP42	ENST00000306177	human	ensembl	74_37	+1	known	silent	c.2394	p.P798	0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP42	HGNC	ENSG00000106346				37	0	0	30	10	25
ERV3-1	0	genome.wustl.edu	37	7	64467055	64467055	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	64467055	64467055	C	T	SNP	ERV3-1	ENST00000528878	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	ERV3-1	HGNC	ENSG00000213462				34	0	0	19	14	42.4242
ASL	0	genome.wustl.edu	37	7	65554148	65554148	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	65554148	65554148	C	T	SNP	ASL	ENST00000304874	human	ensembl	74_37	+1	known	missense	c.904	p.R302C	0.991	pfam_Fumarate_lyase_N,superfamily_L-Aspartase-like,tigrfam_Argininosuccinate_lyase	pfam_Fumarate_lyase_N,superfamily_L-Aspartase-like,prints_Fumarate_lyase_fam,tigrfam_Argininosuccinate_lyase	-	no_errors	ASL	HGNC	ENSG00000126522				91	0	0	59	27	31.3953
TYW1	0	genome.wustl.edu	37	7	66703392	66703392	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	66703392	66703392	G	A	SNP	TYW1	ENST00000359626	human	ensembl	74_37	+1	known	missense	c.2075	p.S692N	0.995	NULL	pfam_rSAM,pfam_Flavodoxin/NO_synth,pfam_tRNA_wybutosine-synth,pfscan_Flavodoxin/NO_synth,prints_Flavdoxin	-	no_errors	TYW1	HGNC	ENSG00000198874				73	0	0	26	14	35
BAZ1B	0	genome.wustl.edu	37	7	72892597	72892597	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	72892597	72892597	A	G	SNP	BAZ1B	ENST00000339594	human	ensembl	74_37	-1	known	silent	c.1194	p.S398	0.434	NULL	pfam_WSTF_Acf1_Cbp146,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_WSTF_Acf1_Cbp146,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ1B	HGNC	ENSG00000009954				99	0	0	72	6	7.69231
WBSCR22	0	genome.wustl.edu	37	7	73108001	73108001	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	73108001	73108001	T	C	SNP	WBSCR22	ENST00000265758	human	ensembl	74_37	+1	known	splice_site	c.642+2	e9+2	1.000	-	-	-	no_errors	WBSCR22	HGNC	ENSG00000071462				190	0	0	128	36	21.9512
WBSCR27	0	genome.wustl.edu	37	7	73256349	73256349	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	73256349	73256349	T	C	SNP	WBSCR27	ENST00000297873	human	ensembl	74_37	-1	known	missense	c.122	p.Q41R	1.000	pfam_UbiE/COQ5_MeTrFase	pfam_Methyltransf_11,pfam_UbiE/COQ5_MeTrFase	-	no_errors	WBSCR27	HGNC	ENSG00000165171				82	0	0	39	29	42.6471
CLIP2	0	genome.wustl.edu	37	7	73790690	73790690	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	73790690	73790690	G	T	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	+1	known	missense	c.1959	p.M653I	0.999	superfamily_t-SNARE	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665				82	0	0	86	5	5.49451
CCDC146	0	genome.wustl.edu	37	7	76909865	76909865	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	76909865	76909865	A	G	SNP	CCDC146	ENST00000285871	human	ensembl	74_37	+1	known	missense	c.1814	p.Q605R	0.445	NULL	NULL	-	no_errors	CCDC146	HGNC	ENSG00000135205				46	0	0	27	7	20.5882
MAGI2	0	genome.wustl.edu	37	7	77764449	77764449	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	77764449	77764449	G	A	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.2920	p.R974W	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391				128	0	0	51	31	37.8049
SEMA3E	0	genome.wustl.edu	37	7	83036496	83036496	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	83036496	83036496	C	T	SNP	SEMA3E	ENST00000307792	human	ensembl	74_37	-1	known	missense	c.730	p.V244I	0.988	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3E	HGNC	ENSG00000170381				50	0	0	33	21	38.8889
SEMA3E	0	genome.wustl.edu	37	7	83119550	83119550	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	83119550	83119550	A	G	SNP	SEMA3E	ENST00000307792	human	ensembl	74_37	-1	known	silent	c.156	p.P52	0.009	superfamily_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3E	HGNC	ENSG00000170381				69	0	0	32	14	30.4348
ABCB1	0	genome.wustl.edu	37	7	87179212	87179212	+	Silent	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	87179212	87179212	A	C	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	silent	c.1509	p.A503	0.855	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563				247	0	0	143	8	5.29801
AKAP9	0	genome.wustl.edu	37	7	91645570	91645570	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	91645570	91645570	A	T	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	missense	c.3776	p.Y1259F	0.101	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914				13	0	0	8	3	27.2727
ANKIB1	0	genome.wustl.edu	37	7	92028136	92028136	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	92028136	92028136	C	T	SNP	ANKIB1	ENST00000265742	human	ensembl	74_37	+1	known	missense	c.3143	p.A1048V	0.602	NULL	pfam_Znf_C6HC,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Znf_RING,smart_Znf_C6HC,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif,pfscan_Znf_RING	-	no_errors	ANKIB1	HGNC	ENSG00000001629				13	0	0	22	2	8.33333
COL1A2	0	genome.wustl.edu	37	7	94029571	94029571	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	94029571	94029571	G	T	SNP	COL1A2	ENST00000297268	human	ensembl	74_37	+1	known	missense	c.196	p.G66C	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fib_collagen_C	-	no_errors	COL1A2	HGNC	ENSG00000164692				117	0	0	72	6	7.69231
COL1A2	0	genome.wustl.edu	37	7	94038108	94038108	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	94038108	94038108	A	G	SNP	COL1A2	ENST00000297268	human	ensembl	74_37	+1	known	silent	c.765	p.P255	0.559	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fib_collagen_C	-	no_errors	COL1A2	HGNC	ENSG00000164692				66	0	0	24	8	25
TRRAP	0	genome.wustl.edu	37	7	98550975	98550975	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	98550975	98550975	C	G	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	missense	c.5628	p.D1876E	0.986	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367				80	0	0	53	32	37.6471
ATP5J2-PTCD1	0	genome.wustl.edu	37	7	99032621	99032621	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	99032621	99032621	T	C	SNP	ATP5J2-PTCD1	ENST00000413834	human	ensembl	74_37	-1	known	missense	c.392	p.D131G	0.016	NULL	pfam_Pentatricopeptide_repeat,pfam_F1F0-ATPsyn_F_prd,tigrfam_Pentatricopeptide_repeat	-	no_errors	ATP5J2-PTCD1	HGNC	ENSG00000248919				110	0	0	63	25	28.4091
GPC2	0	genome.wustl.edu	37	7	99769744	99769744	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	99769744	99769744	T	C	SNP	GPC2	ENST00000292377	human	ensembl	74_37	-1	known	missense	c.989	p.Y330C	0.995	pfam_Glypican	pfam_Glypican	-	no_errors	GPC2	HGNC	ENSG00000213420				94	0	0	48	44	47.8261
PVRIG	0	genome.wustl.edu	37	7	99818563	99818563	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	99818563	99818563	G	A	SNP	PVRIG	ENST00000317271	human	ensembl	74_37	+1	known	missense	c.670	p.A224T	0.008	NULL	NULL	-	no_errors	PVRIG	HGNC	ENSG00000213413				142	0	0	119	8	6.29921
VPS13B	0	genome.wustl.edu	37	8	100443829	100443829	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	100443829	100443829	T	C	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	silent	c.3147	p.P1049	0.997	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				79	0	0	56	22	28.2051
VPS13B	0	genome.wustl.edu	37	8	100832310	100832310	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	100832310	100832310	A	G	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	missense	c.9029	p.Q3010R	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				105	0	0	98	24	19.6721
RGS22	0	genome.wustl.edu	37	8	100990178	100990178	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	100990178	100990178	T	G	SNP	RGS22	ENST00000360863	human	ensembl	74_37	-1	known	missense	c.3486	p.K1162N	0.010	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	RGS22	HGNC	ENSG00000132554				49	0	0	46	13	22.0339
RGS22	0	genome.wustl.edu	37	8	101083648	101083648	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	101083648	101083648	A	G	SNP	RGS22	ENST00000360863	human	ensembl	74_37	-1	known	silent	c.543	p.T181	0.387	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	RGS22	HGNC	ENSG00000132554				98	0	0	93	15	13.8889
KLF10	0	genome.wustl.edu	37	8	103663669	103663669	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	103663669	103663669	C	T	SNP	KLF10	ENST00000285407	human	ensembl	74_37	-1	known	silent	c.891	p.Q297	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF10	HGNC	ENSG00000155090				64	0	0	87	30	25.641
LRP12	0	genome.wustl.edu	37	8	105601124	105601124	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	105601124	105601124	A	G	SNP	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	missense	c.2	p.M1T	0.998	NULL	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650				19	0	0	22	10	31.25
PKHD1L1	0	genome.wustl.edu	37	8	110477216	110477216	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	110477216	110477216	G	T	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.8155	p.G2719W	1.000	NULL	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				141	0	0	175	35	16.6667
KCNV1	0	genome.wustl.edu	37	8	110984793	110984793	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	110984793	110984793	G	T	SNP	KCNV1	ENST00000297404	human	ensembl	74_37	-1	known	missense	c.685	p.L229M	0.885	prints_K_chnl	pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv8,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv4	-	no_errors	KCNV1	HGNC	ENSG00000164794				76	0	0	103	15	12.7119
CSMD3	0	genome.wustl.edu	37	8	113301692	113301692	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	113301692	113301692	A	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.9050	p.V3017A	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				56	0	0	77	23	23
CSMD3	0	genome.wustl.edu	37	8	113569032	113569032	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	113569032	113569032	C	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.4194	p.G1398	0.111	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				100	0	0	68	22	24.4444
CSMD3	0	genome.wustl.edu	37	8	114111065	114111065	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	114111065	114111065	A	C	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.837	p.I279M	0.994	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				53	0	0	40	11	21.5686
TRPS1	0	genome.wustl.edu	37	8	116599312	116599312	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	116599312	116599312	G	A	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	silent	c.2616	p.G872	0.047	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447				73	0	0	92	23	20
TRPS1	0	genome.wustl.edu	37	8	116599595	116599595	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	116599595	116599595	A	G	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.2333	p.V778A	1.000	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447				407	0	0	407	80	16.4271
USP17L2	0	genome.wustl.edu	37	8	11995922	11995922	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	11995922	11995922	T	C	SNP	USP17L2	ENST00000333796	human	ensembl	74_37	-1	known	silent	c.348	p.T116	0.992	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_HABP4_PAIRBP1-bd,pfscan_Peptidase_C19/C67	-	no_errors	USP17L2	HGNC	ENSG00000223443				50	0	0	40	29	42.029
TBC1D31	0	genome.wustl.edu	37	8	124089413	124089413	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	124089413	124089413	A	C	SNP	TBC1D31	ENST00000287380	human	ensembl	74_37	+1	known	missense	c.140	p.N47T	1.000	smart_WD40_repeat	pfam_Rab-GTPase-TBC_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Rab-GTPase-TBC_dom,smart_WD40_repeat,pfscan_Rab-GTPase-TBC_dom,pfscan_WD40_repeat_dom	-	no_errors	TBC1D31	HGNC	ENSG00000156787				143	0	0	116	28	19.4444
FBXO32	0	genome.wustl.edu	37	8	124526525	124526525	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	124526525	124526525	C	T	SNP	FBXO32	ENST00000517956	human	ensembl	74_37	-1	known	missense	c.421	p.A141T	1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO32	HGNC	ENSG00000156804				40	0	0	36	7	16.2791
KIAA0196	0	genome.wustl.edu	37	8	126056870	126056870	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	126056870	126056870	G	A	SNP	KIAA0196	ENST00000318410	human	ensembl	74_37	-1	known	missense	c.2575	p.R859C	1.000	pfam_WASH_strumpellin	pfam_WASH_strumpellin,superfamily_Ig_E-set	-	no_errors	KIAA0196	HGNC	ENSG00000164961				261	0	0	255	51	16.6667
TRIB1	0	genome.wustl.edu	37	8	126448430	126448430	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	126448430	126448430	T	C	SNP	TRIB1	ENST00000311922	human	ensembl	74_37	+1	known	missense	c.836	p.V279A	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	TRIB1	HGNC	ENSG00000173334				72	0	0	132	21	13.7255
ADCY8	0	genome.wustl.edu	37	8	132051786	132051786	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	132051786	132051786	C	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.794	p.G265V	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				41	0	0	61	19	23.75
PHF20L1	0	genome.wustl.edu	37	8	133829724	133829724	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	133829724	133829724	A	G	SNP	PHF20L1	ENST00000395386	human	ensembl	74_37	+1	putative	missense	c.1513	p.T505A	0.020	pfam_DUF3776	pfam_DUF3776,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Tudor-like_plant	-	no_errors	PHF20L1	HGNC	ENSG00000129292				47	0	0	69	6	8
TG	0	genome.wustl.edu	37	8	134128894	134128894	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	134128894	134128894	C	T	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.7796	p.A2599V	0.671	pfam_CarbesteraseB,pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832				121	0	0	105	25	19.2308
NDRG1	0	genome.wustl.edu	37	8	134274294	134274294	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	134274294	134274294	C	T	SNP	NDRG1	ENST00000323851	human	ensembl	74_37	-1	known	missense	c.322	p.A108T	0.002	pfam_Ndr	pfam_Ndr	-	no_errors	NDRG1	HGNC	ENSG00000104419				120	0	0	119	36	23.2258
FAM135B	0	genome.wustl.edu	37	8	139164232	139164232	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	139164232	139164232	A	C	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	missense	c.2486	p.L829R	0.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724				79	0	0	101	9	8.18182
BAI1	0	genome.wustl.edu	37	8	143623520	143623520	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	143623520	143623520	C	A	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	missense	c.3925	p.L1309I	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790				93	0	0	102	21	17.0732
GML	0	genome.wustl.edu	37	8	143928051	143928051	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	143928051	143928051	T	C	SNP	GML	ENST00000220940	human	ensembl	74_37	+1	known	missense	c.422	p.V141A	0.000	NULL	smart_LY6_UPA_recep-like	-	no_errors	GML	HGNC	ENSG00000104499				87	0	0	88	15	14.5631
ZFP41	0	genome.wustl.edu	37	8	144332268	144332268	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	144332268	144332268	A	C	SNP	ZFP41	ENST00000330701	human	ensembl	74_37	+1	known	missense	c.255	p.K85N	0.969	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP41	HGNC	ENSG00000181638				103	0	0	161	9	5.29412
EEF1D	0	genome.wustl.edu	37	8	144662696	144662696	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	144662696	144662696	T	C	SNP	EEF1D	ENST00000423316	human	ensembl	74_37	-1	known	missense	c.1690	p.I564V	1.000	pfam_Transl_elong_fac_EF1B_bsu/dsu,superfamily_Transl_elong_fac_EF1B_bsu/dsu,smart_Transl_elong_fac_EF1B_bsu/dsu	pfam_Transl_elong_fac_EF1B_bsu/dsu,pfam_EF-1_beta_acid_region_euk,superfamily_Transl_elong_fac_EF1B_bsu/dsu,smart_Transl_elong_fac_EF1B_bsu/dsu	-	no_errors	EEF1D	HGNC	ENSG00000104529				107	0	0	141	23	14.0244
TSTA3	0	genome.wustl.edu	37	8	144698770	144698770	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	144698770	144698770	C	T	SNP	TSTA3	ENST00000425753	human	ensembl	74_37	-1	known	nonsense	c.113	p.W38*	1.000	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct	-	no_errors	TSTA3	HGNC	ENSG00000104522				155	0	0	178	43	19.457
EPPK1	0	genome.wustl.edu	37	8	144945478	144945478	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	144945478	144945478	A	G	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	silent	c.1944	p.A648	0.012	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				23	0	0	31	3	8.82353
PLEC	0	genome.wustl.edu	37	8	144993691	144993691	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	144993691	144993691	A	G	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.10709	p.V3570A	0.996	smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				86	0	0	122	36	22.7848
PLEC	0	genome.wustl.edu	37	8	144993786	144993786	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	144993786	144993786	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.10614	p.P3538	0.107	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				25	0	0	55	22	28.5714
SHARPIN	0	genome.wustl.edu	37	8	145153893	145153893	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	145153893	145153893	C	T	SNP	SHARPIN	ENST00000398712	human	ensembl	74_37	-1	known	missense	c.1052	p.S351N	0.998	pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_Znf_RanBP2	pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	SHARPIN	HGNC	ENSG00000179526				35	0	0	58	7	10.7692
DGAT1	0	genome.wustl.edu	37	8	145542543	145542543	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	145542543	145542543	A	T	SNP	DGAT1	ENST00000332324	human	ensembl	74_37	-1	known	missense	c.370	p.F124I	1.000	superfamily_PEP-util_enz_mobile_dom	pfam_MBOAT_fam,superfamily_PEP-util_enz_mobile_dom	-	no_errors	DGAT1	HGNC	ENSG00000185000				27	0	0	33	5	13.1579
FBXL6	0	genome.wustl.edu	37	8	145579803	145579803	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	145579803	145579803	A	G	SNP	FBXL6	ENST00000331890	human	ensembl	74_37	-1	known	missense	c.1297	p.F433L	0.551	NULL	superfamily_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp	-	no_errors	FBXL6	HGNC	ENSG00000182325				124	0	0	201	11	5.18868
ADCK5	0	genome.wustl.edu	37	8	145616151	145616151	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	145616151	145616151	G	A	SNP	ADCK5	ENST00000308860	human	ensembl	74_37	+1	known	silent	c.438	p.V146	1.000	NULL	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK5	HGNC	ENSG00000173137				82	0	0	99	23	18.8525
CPSF1	0	genome.wustl.edu	37	8	145619255	145619255	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	145619255	145619255	T	C	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	splice_site	c.3860-2	e34-2	0.991	-	-	-	no_errors	CPSF1	HGNC	ENSG00000071894				53	0	0	66	6	8.33333
KIFC2	0	genome.wustl.edu	37	8	145698024	145698024	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	145698024	145698024	G	A	SNP	KIFC2	ENST00000301332	human	ensembl	74_37	+1	known	missense	c.1796	p.R599H	0.993	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIFC2	HGNC	ENSG00000167702				35	0	0	54	12	18.1818
TUSC3	0	genome.wustl.edu	37	8	15605939	15605939	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	15605939	15605939	A	G	SNP	TUSC3	ENST00000503731	human	ensembl	74_37	+1	known	silent	c.993	p.S331	0.946	NULL	pfam_OligosaccharylTrfase_OST3/OST6,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TUSC3	HGNC	ENSG00000104723				127	0	0	40	29	42.029
ARHGEF10	0	genome.wustl.edu	37	8	1905280	1905280	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	1905280	1905280	C	T	SNP	ARHGEF10	ENST00000398564	human	ensembl	74_37	+1	known	missense	c.3961	p.R1321C	0.178	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10	HGNC	ENSG00000104728				81	0	0	45	23	33.8235
DMTN	0	genome.wustl.edu	37	8	21938932	21938932	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	21938932	21938932	G	A	SNP	DMTN	ENST00000265800	human	ensembl	74_37	+1	known	silent	c.1176	p.L392	1.000	pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin_headpiece,pfscan_Villin_headpiece	pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin_headpiece,pfscan_Villin_headpiece	-	no_errors	DMTN	HGNC	ENSG00000158856				128	0	0	48	39	44.8276
PIWIL2	0	genome.wustl.edu	37	8	22210607	22210607	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	22210607	22210607	A	G	SNP	PIWIL2	ENST00000356766	human	ensembl	74_37	+1	known	missense	c.2539	p.M847V	1.000	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ_dom,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL2	HGNC	ENSG00000197181				139	0	0	62	19	23.4568
RHOBTB2	0	genome.wustl.edu	37	8	22863501	22863501	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	22863501	22863501	A	G	SNP	RHOBTB2	ENST00000251822	human	ensembl	74_37	+1	known	missense	c.325	p.I109V	1.000	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB2	HGNC	ENSG00000008853				568	0	0	326	177	35.1889
SCARA5	0	genome.wustl.edu	37	8	27764668	27764668	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	27764668	27764668	T	C	SNP	SCARA5	ENST00000354914	human	ensembl	74_37	-1	known	missense	c.1093	p.K365E	1.000	pfam_Collagen	pfam_SRCR,pfam_Collagen,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	SCARA5	HGNC	ENSG00000168079				196	0	0	104	33	24.0876
FZD3	0	genome.wustl.edu	37	8	28360587	28360587	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	28360587	28360587	T	C	SNP	FZD3	ENST00000240093	human	ensembl	74_37	+1	known	silent	c.57	p.H19	0.592	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD3	HGNC	ENSG00000104290				193	0	0	73	25	25.5102
CSMD1	0	genome.wustl.edu	37	8	2857534	2857534	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	2857534	2857534	C	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.8152	p.V2718M	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				167	0	0	107	64	37.4269
TUBBP1	0	genome.wustl.edu	37	8	30210244	30210244	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	30210244	30210244	C	T	SNP	TUBBP1	ENST00000518096	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TUBBP1	HGNC	ENSG00000127589				72	0	0	57	33	36.6667
CSMD1	0	genome.wustl.edu	37	8	3046507	3046507	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	3046507	3046507	G	A	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	nonsense	c.5428	p.R1810*	0.729	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				41	0	0	29	4	12.1212
WRN	0	genome.wustl.edu	37	8	30948393	30948393	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	30948393	30948393	A	G	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	silent	c.1764	p.V588	0.001	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392				128	0	0	71	4	5.33333
BAG4	0	genome.wustl.edu	37	8	38034486	38034486	+	Silent	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	38034486	38034486	T	G	SNP	BAG4	ENST00000287322	human	ensembl	74_37	+1	known	silent	c.99	p.P33	0.559	NULL	pfam_BAG_domain,smart_BAG_domain,pfscan_BAG_domain	-	no_errors	BAG4	HGNC	ENSG00000156735				10	0	0	3	8	72.7273
C8orf4	0	genome.wustl.edu	37	8	40011203	40011203	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	40011203	40011203	T	C	SNP	C8orf4	ENST00000315792	human	ensembl	74_37	+1	known	missense	c.152	p.L51P	1.000	NULL	NULL	-	no_errors	C8orf4	HGNC	ENSG00000176907				80	0	0	80	5	5.88235
ANK1	0	genome.wustl.edu	37	8	41551573	41551573	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	41551573	41551573	C	A	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.3375	p.Q1125H	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534				62	0	0	53	13	19.697
ANK1	0	genome.wustl.edu	37	8	41554007	41554007	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	41554007	41554007	G	A	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.2834	p.A945V	0.999	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534				83	0	0	36	31	46.2687
ANK1	0	genome.wustl.edu	37	8	41563684	41563684	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	41563684	41563684	C	T	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.2074	p.V692I	0.984	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534				103	0	0	39	35	47.2973
ANK1	0	genome.wustl.edu	37	8	41753956	41753956	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	41753956	41753956	C	T	SNP	ANK1	ENST00000265709	human	ensembl	74_37	-1	known	missense	c.43	p.E15K	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534				38	0	0	26	8	23.5294
AP3M2	0	genome.wustl.edu	37	8	42019916	42019916	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	42019916	42019916	A	G	SNP	AP3M2	ENST00000174653	human	ensembl	74_37	+1	known	missense	c.563	p.D188G	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP3M2	HGNC	ENSG00000070718				316	0	0	143	114	44.358
HGSNAT	0	genome.wustl.edu	37	8	43016647	43016647	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	43016647	43016647	T	C	SNP	HGSNAT	ENST00000458501	human	ensembl	74_37	+1	known	missense	c.644	p.L215S	0.476	NULL	pfam_DUF1624	-	no_errors	HGSNAT	HGNC	ENSG00000165102				40	0	0	19	6	24
SPIDR	0	genome.wustl.edu	37	8	48511574	48511574	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	48511574	48511574	C	T	SNP	SPIDR	ENST00000297423	human	ensembl	74_37	+1	known	missense	c.1360	p.R454C	0.000	NULL	NULL	-	no_errors	SPIDR	HGNC	ENSG00000164808				30	0	0	16	10	38.4615
MCM4	0	genome.wustl.edu	37	8	48887520	48887520	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	48887520	48887520	C	T	SNP	MCM4	ENST00000262105	human	ensembl	74_37	+1	known	missense	c.2363	p.T788M	1.000	NULL	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM4	HGNC	ENSG00000104738				57	0	0	33	25	43.1034
SNAI2	0	genome.wustl.edu	37	8	49833799	49833799	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	49833799	49833799	T	C	SNP	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	missense	c.26	p.K9R	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549				158	0	0	117	22	15.8273
PXDNL	0	genome.wustl.edu	37	8	52384842	52384842	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	52384842	52384842	C	T	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	silent	c.717	p.E239	1.000	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485				114	0	0	56	6	9.67742
OPRK1	0	genome.wustl.edu	37	8	54163341	54163341	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	54163341	54163341	C	T	SNP	OPRK1	ENST00000265572	human	ensembl	74_37	-1	known	missense	c.257	p.R86Q	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Opioid_rcpt,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Kappa_opi_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OPRK1	HGNC	ENSG00000082556				40	0	0	21	14	40
SOX17	0	genome.wustl.edu	37	8	55372308	55372308	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	55372308	55372308	C	T	SNP	SOX17	ENST00000297316	human	ensembl	74_37	+1	known	missense	c.998	p.P333L	1.000	pfam_Sox_C_TAD	pfam_Sox_C_TAD,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX17	HGNC	ENSG00000164736				13	0	0	3	4	57.1429
RP1	0	genome.wustl.edu	37	8	55533545	55533545	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	55533545	55533545	A	C	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	missense	c.19	p.T7P	0.927	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237				175	0	0	65	26	28.5714
MOS	0	genome.wustl.edu	37	8	57026165	57026165	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	57026165	57026165	C	T	SNP	MOS	ENST00000311923	human	ensembl	74_37	-1	known	missense	c.377	p.R126H	0.710	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MOS	HGNC	ENSG00000172680				156	0	0	96	73	43.1953
DNAJC5B	0	genome.wustl.edu	37	8	66989015	66989015	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	66989015	66989015	C	T	SNP	DNAJC5B	ENST00000276570	human	ensembl	74_37	+1	known	silent	c.240	p.Y80	0.985	pfam_DnaJ_domain,superfamily_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC5B	HGNC	ENSG00000147570				173	0	0	127	43	25.2941
TRIM55	0	genome.wustl.edu	37	8	67039509	67039509	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	67039509	67039509	C	T	SNP	TRIM55	ENST00000315962	human	ensembl	74_37	+1	known	silent	c.6	p.S2	0.913	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM55	HGNC	ENSG00000147573				90	0	0	64	14	17.9487
C8orf46	0	genome.wustl.edu	37	8	67405903	67405903	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	67405903	67405903	G	T	SNP	C8orf46	ENST00000305454	human	ensembl	74_37	+1	known	missense	c.20	p.S7I	1.000	NULL	NULL	-	no_errors	C8orf46	HGNC	ENSG00000169085				86	0	0	43	13	23.2143
PREX2	0	genome.wustl.edu	37	8	68930131	68930131	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	68930131	68930131	T	C	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	silent	c.192	p.N64	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889				26	0	0	26	3	10.3448
SLCO5A1	0	genome.wustl.edu	37	8	70744009	70744009	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	70744009	70744009	C	T	SNP	SLCO5A1	ENST00000260126	human	ensembl	74_37	-1	known	silent	c.900	p.L300	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO5A1	HGNC	ENSG00000137571				88	0	0	70	4	5.40541
EYA1	0	genome.wustl.edu	37	8	72229819	72229819	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	72229819	72229819	G	T	SNP	EYA1	ENST00000340726	human	ensembl	74_37	-1	known	missense	c.524	p.P175H	1.000	NULL	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA1	HGNC	ENSG00000104313				164	0	0	56	44	44
MSC	0	genome.wustl.edu	37	8	72756328	72756328	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	72756328	72756328	G	A	SNP	MSC	ENST00000325509	human	ensembl	74_37	-1	known	missense	c.86	p.P29L	0.841	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MSC	HGNC	ENSG00000178860				50	0	0	20	8	28.5714
TRPA1	0	genome.wustl.edu	37	8	72951992	72951992	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	72951992	72951992	G	T	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	missense	c.2102	p.P701H	1.000	NULL	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321				104	0	0	38	15	28.3019
STAU2	0	genome.wustl.edu	37	8	74601001	74601001	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	74601001	74601001	T	C	SNP	STAU2	ENST00000524300	human	ensembl	74_37	-1	known	silent	c.162	p.E54	1.000	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	STAU2	HGNC	ENSG00000040341				188	0	0	115	12	9.44882
CRISPLD1	0	genome.wustl.edu	37	8	75898418	75898418	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	75898418	75898418	T	A	SNP	CRISPLD1	ENST00000262207	human	ensembl	74_37	+1	known	missense	c.196	p.L66M	0.992	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1	pfam_LCCL,pfam_CAP_domain,superfamily_CAP_domain,superfamily_LCCL,smart_Allrgn_V5/Tpx1,smart_LCCL,pfscan_LCCL,prints_Allrgn_V5/Tpx1	-	no_errors	CRISPLD1	HGNC	ENSG00000121005				87	0	0	59	10	14.4928
HNF4G	0	genome.wustl.edu	37	8	76471265	76471265	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	76471265	76471265	A	G	SNP	HNF4G	ENST00000396423	human	ensembl	74_37	+1	known	silent	c.1086	p.L362	0.998	superfamily_Nucl_hormone_rcpt_ligand-bd,prints_COUP_TF	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4G	HGNC	ENSG00000164749				70	0	0	124	43	25.7485
ZFHX4	0	genome.wustl.edu	37	8	77763747	77763747	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	77763747	77763747	G	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	silent	c.4590	p.T1530	0.575	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				29	0	0	67	6	8.21918
PAG1	0	genome.wustl.edu	37	8	81892718	81892718	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	81892718	81892718	T	C	SNP	PAG1	ENST00000220597	human	ensembl	74_37	-1	known	silent	c.888	p.S296	0.012	NULL	NULL	-	no_errors	PAG1	HGNC	ENSG00000076641				87	0	0	59	6	9.23077
CNGB3	0	genome.wustl.edu	37	8	87679290	87679290	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	87679290	87679290	G	A	SNP	CNGB3	ENST00000320005	human	ensembl	74_37	-1	known	missense	c.715	p.R239C	1.000	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB3	HGNC	ENSG00000170289				67	0	0	85	15	15
MMP16	0	genome.wustl.edu	37	8	89128810	89128810	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	89128810	89128810	C	T	SNP	MMP16	ENST00000286614	human	ensembl	74_37	-1	known	missense	c.1009	p.G337R	1.000	pirsf_Pept_M10A_Metazoans,superfamily_Hemopexin-like_dom	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP16	HGNC	ENSG00000156103				113	0	0	116	31	21.0884
NBN	0	genome.wustl.edu	37	8	90983458	90983458	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	90983458	90983458	C	T	SNP	NBN	ENST00000265433	human	ensembl	74_37	-1	known	silent	c.645	p.R215	0.000	pirsf_Nibrin_met	pfam_DNA-repair_Nbs1_C,pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_BRCT_dom,smart_FHA_dom,pirsf_Nibrin_met,pfscan_FHA_dom	-	no_errors	NBN	HGNC	ENSG00000104320				46	0	0	54	10	15.625
CALB1	0	genome.wustl.edu	37	8	91081413	91081413	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	91081413	91081413	T	C	SNP	CALB1	ENST00000265431	human	ensembl	74_37	-1	known	missense	c.284	p.Q95R	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CALB1	HGNC	ENSG00000104327				81	0	0	70	13	15.6627
NECAB1	0	genome.wustl.edu	37	8	91929826	91929826	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	91929826	91929826	A	G	SNP	NECAB1	ENST00000417640	human	ensembl	74_37	+1	known	missense	c.464	p.E155G	1.000	NULL	pfam_Antibiotic_mOase,superfamily_Dimeric_a/b-barrel,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NECAB1	HGNC	ENSG00000123119				57	0	0	61	6	8.95522
CCDC180	0	genome.wustl.edu	37	9	100070292	100070292	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	100070292	100070292	G	A	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	missense	c.79	p.D27N	0.000	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816				110	1	0.900901	63	16	20.2532
TMOD1	0	genome.wustl.edu	37	9	100328170	100328170	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	100328170	100328170	T	C	SNP	TMOD1	ENST00000259365	human	ensembl	74_37	+1	known	missense	c.659	p.L220P	1.000	NULL	pfam_Tropomodulin	-	no_errors	TMOD1	HGNC	ENSG00000136842				124	0	0	113	26	18.705
XPA	0	genome.wustl.edu	37	9	100456024	100456024	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	100456024	100456024	C	T	SNP	XPA	ENST00000375128	human	ensembl	74_37	-1	known	missense	c.190	p.A64T	1.000	NULL	pfam_XPA_C,pfam_Znf_XPA_CS,superfamily_DNA-bd_dom_put,tigrfam_XPA	-	no_errors	XPA	HGNC	ENSG00000136936				71	0	0	40	4	9.09091
BAAT	0	genome.wustl.edu	37	9	104130442	104130442	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	104130442	104130442	T	C	SNP	BAAT	ENST00000259407	human	ensembl	74_37	-1	known	missense	c.629	p.Y210C	1.000	pfam_BAAT_C,pirsf_Acyl-CoA_thioEstase_long-chain	pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain	-	no_errors	BAAT	HGNC	ENSG00000136881				111	0	0	85	6	6.59341
ZNF189	0	genome.wustl.edu	37	9	104171448	104171448	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	104171448	104171448	T	C	SNP	ZNF189	ENST00000339664	human	ensembl	74_37	+1	known	silent	c.1398	p.S466	0.981	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF189	HGNC	ENSG00000136870				142	0	0	80	8	9.09091
ALDOB	0	genome.wustl.edu	37	9	104187902	104187902	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	104187902	104187902	G	A	SNP	ALDOB	ENST00000374855	human	ensembl	74_37	-1	known	missense	c.632	p.A211V	1.000	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOB	HGNC	ENSG00000136872				88	0	0	69	4	5.47945
ACTL7A	0	genome.wustl.edu	37	9	111625023	111625023	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	111625023	111625023	G	A	SNP	ACTL7A	ENST00000333999	human	ensembl	74_37	+1	known	missense	c.421	p.V141M	0.997	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL7A	HGNC	ENSG00000187003				53	0	0	46	22	32.3529
SVEP1	0	genome.wustl.edu	37	9	113192681	113192681	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	113192681	113192681	T	C	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	silent	c.5403	p.S1801	0.009	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124				26	0	0	14	8	36.3636
MUSK	0	genome.wustl.edu	37	9	113562722	113562722	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	113562722	113562722	G	T	SNP	MUSK	ENST00000374448	human	ensembl	74_37	+1	known	missense	c.2064	p.Q688H	0.002	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Frizzled_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MUSK	HGNC	ENSG00000030304				188	0	0	131	11	7.74648
INIP	0	genome.wustl.edu	37	9	115478759	115478759	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	115478759	115478759	C	T	SNP	INIP	ENST00000374242	human	ensembl	74_37	-1	known	missense	c.7	p.A3T	1.000	NULL	NULL	-	no_errors	INIP	HGNC	ENSG00000148153				154	0	0	72	4	5.26316
AMBP	0	genome.wustl.edu	37	9	116840388	116840388	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	116840388	116840388	G	A	SNP	AMBP	ENST00000265132	human	ensembl	74_37	-1	known	silent	c.102	p.N34	0.998	superfamily_Calycin-like,prints_A1-microglobln,prints_PstgldnD_synth	pfam_Prot_inh_Kunz-m,pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m,prints_A1-microglobln,prints_PstgldnD_synth,prints_Prot_inh_Kunz-m,prints_Lipocalin	-	no_errors	AMBP	HGNC	ENSG00000106927				145	0	0	87	56	39.1608
ASTN2	0	genome.wustl.edu	37	9	119625888	119625888	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	119625888	119625888	G	A	SNP	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	missense	c.2014	p.R672W	0.998	NULL	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219				77	0	0	60	38	38.7755
OR1N1	0	genome.wustl.edu	37	9	125288841	125288841	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	125288841	125288841	G	A	SNP	OR1N1	ENST00000304880	human	ensembl	74_37	-1	known	silent	c.732	p.C244	0.006	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1N1	HGNC	ENSG00000171505				90	0	0	49	27	35.5263
RC3H2	0	genome.wustl.edu	37	9	125627905	125627905	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	125627905	125627905	T	C	SNP	RC3H2	ENST00000357244	human	ensembl	74_37	-1	known	missense	c.1357	p.T453A	1.000	NULL	pfam_Znf_CCCH,smart_Znf_RING,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	RC3H2	HGNC	ENSG00000056586				106	0	0	54	5	8.47458
RABGAP1	0	genome.wustl.edu	37	9	125782719	125782719	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	125782719	125782719	A	G	SNP	RABGAP1	ENST00000373647	human	ensembl	74_37	+1	known	missense	c.1775	p.Y592C	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454				85	0	0	42	9	17.6471
WDR38	0	genome.wustl.edu	37	9	127617935	127617935	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	127617935	127617935	C	A	SNP	WDR38	ENST00000373574	human	ensembl	74_37	+1	known	missense	c.213	p.F71L	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR38	HGNC	ENSG00000136918				90	0	0	47	11	18.9655
RPL35	0	genome.wustl.edu	37	9	127620344	127620344	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	127620344	127620344	G	A	SNP	RPL35	ENST00000348462	human	ensembl	74_37	-1	known	silent	c.225	p.G75	0.997	NULL	pfam_Ribosomal_L29,superfamily_Ribosomal_L29,tigrfam_Ribosomal_L29	-	no_errors	RPL35	HGNC	ENSG00000136942				34	0	0	17	12	41.3793
ZBTB34	0	genome.wustl.edu	37	9	129642108	129642108	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	129642108	129642108	G	A	SNP	ZBTB34	ENST00000319119	human	ensembl	74_37	+1	known	missense	c.430	p.G144S	0.959	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB34	HGNC	ENSG00000177125				86	0	0	64	26	28.8889
GARNL3	0	genome.wustl.edu	37	9	130152962	130152962	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	130152962	130152962	A	C	SNP	GARNL3	ENST00000373387	human	ensembl	74_37	+1	known	missense	c.2786	p.K929T	0.997	NULL	pfam_Citron,pfam_Rap_GAP_dom,smart_Citron,pfscan_Rap_GAP_dom	-	no_errors	GARNL3	HGNC	ENSG00000136895				225	0	0	131	45	25.5682
ZNF79	0	genome.wustl.edu	37	9	130197367	130197367	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	130197367	130197367	A	G	SNP	ZNF79	ENST00000342483	human	ensembl	74_37	+1	known	splice_site	c.106-2	e3-2	0.998	-	-	-	no_errors	ZNF79	HGNC	ENSG00000196152				123	0	0	58	29	33.3333
CIZ1	0	genome.wustl.edu	37	9	130941408	130941408	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	130941408	130941408	G	A	SNP	CIZ1	ENST00000538431	human	ensembl	74_37	-1	known	nonsense	c.1078	p.Q360*	0.461	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,pfscan_Znf_C2H2_matrin	-	no_errors	CIZ1	HGNC	ENSG00000148337				59	0	0	41	25	37.8788
ODF2	0	genome.wustl.edu	37	9	131223325	131223325	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	131223325	131223325	G	T	SNP	ODF2	ENST00000434106	human	ensembl	74_37	+1	known	silent	c.228	p.R76	1.000	NULL	NULL	-	no_errors	ODF2	HGNC	ENSG00000136811				49	0	0	46	20	30.303
MPDZ	0	genome.wustl.edu	37	9	13136156	13136156	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	13136156	13136156	C	T	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	missense	c.4318	p.A1440T	1.000	NULL	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186				36	0	0	19	3	13.6364
TBC1D13	0	genome.wustl.edu	37	9	131565555	131565555	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	131565555	131565555	G	A	SNP	TBC1D13	ENST00000372648	human	ensembl	74_37	+1	known	silent	c.570	p.V190	0.000	superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D13	HGNC	ENSG00000107021				62	0	0	39	16	29.0909
FAM73B	0	genome.wustl.edu	37	9	131825503	131825503	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	131825503	131825503	G	A	SNP	FAM73B	ENST00000494608	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM73B	HGNC	ENSG00000148343				56	0	0	34	9	20.9302
ASB6	0	genome.wustl.edu	37	9	132400101	132400101	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	132400101	132400101	C	T	SNP	ASB6	ENST00000277458	human	ensembl	74_37	-1	known	missense	c.1234	p.E412K	0.996	smart_SOCS_C,pfscan_SOCS_C	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB6	HGNC	ENSG00000148331				114	0	0	62	28	31.1111
MPDZ	0	genome.wustl.edu	37	9	13247747	13247747	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	13247747	13247747	G	A	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	missense	c.70	p.R24C	1.000	pfam_L27_2,pfscan_L27	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186				269	0	0	112	63	36
C9orf78	0	genome.wustl.edu	37	9	132590511	132590511	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	132590511	132590511	G	A	SNP	C9orf78	ENST00000372447	human	ensembl	74_37	-1	known	missense	c.799	p.R267C	1.000	NULL	pfam_Hep_59	-	no_errors	C9orf78	HGNC	ENSG00000136819				110	0	0	89	5	5.31915
LAMC3	0	genome.wustl.edu	37	9	133936465	133936465	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	133936465	133936465	A	G	SNP	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	silent	c.2202	p.E734	1.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555				58	0	0	41	3	6.81818
TSC1	0	genome.wustl.edu	37	9	135781295	135781295	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	135781295	135781295	A	G	SNP	TSC1	ENST00000298552	human	ensembl	74_37	-1	known	missense	c.1670	p.L557P	0.000	pfam_Hamartin	pfam_Hamartin,superfamily_ARM-type_fold	-	no_errors	TSC1	HGNC	ENSG00000165699				90	0	0	57	4	6.55738
CEL	0	genome.wustl.edu	37	9	135947128	135947128	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	135947128	135947128	A	G	SNP	CEL	ENST00000372080	human	ensembl	74_37	+1	known	missense	c.2248	p.M750V	0.986	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CEL	HGNC	ENSG00000170835				69	0	0	21	13	38.2353
ADAMTS13	0	genome.wustl.edu	37	9	136321249	136321249	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	136321249	136321249	G	A	SNP	ADAMTS13	ENST00000371929	human	ensembl	74_37	+1	known	silent	c.3627	p.G1209	0.000	superfamily_CUB_dom	pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,superfamily_CUB_dom,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS13	HGNC	ENSG00000160323				124	0	0	85	12	12.3711
RXRA	0	genome.wustl.edu	37	9	137300061	137300061	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	137300061	137300061	G	A	SNP	RXRA	ENST00000481739	human	ensembl	74_37	+1	known	missense	c.346	p.V116I	1.000	pfam_Nuc_recep-AF1	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Nuc_recep-AF1,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoic_acid_rcpt	-	no_errors	RXRA	HGNC	ENSG00000186350				44	0	0	25	10	28.5714
OLFM1	0	genome.wustl.edu	37	9	137982144	137982144	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	137982144	137982144	G	A	SNP	OLFM1	ENST00000371793	human	ensembl	74_37	+1	known	missense	c.254	p.C85Y	1.000	pfam_Noelin-1	pfam_Olfac-like,pfam_Noelin-1,superfamily_Quinonprotein_ADH-like_supfam,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFM1	HGNC	ENSG00000130558				48	0	0	28	14	33.3333
KCNT1	0	genome.wustl.edu	37	9	138677161	138677161	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	138677161	138677161	C	T	SNP	KCNT1	ENST00000298480	human	ensembl	74_37	+1	known	silent	c.3162	p.H1054	0.345	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT1	HGNC	ENSG00000107147				73	0	0	51	11	17.7419
C9orf69	0	genome.wustl.edu	37	9	139008452	139008452	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	139008452	139008452	G	T	SNP	C9orf69	ENST00000561457	human	ensembl	74_37	-1	known	nonsense	c.369	p.C123*	1.000	NULL	NULL	-	no_errors	C9orf69	HGNC	ENSG00000238227				48	0	0	45	4	8.16327
CARD9	0	genome.wustl.edu	37	9	139265834	139265834	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	139265834	139265834	C	T	SNP	CARD9	ENST00000371732	human	ensembl	74_37	-1	known	silent	c.264	p.P88	0.056	pfam_CARD,superfamily_DEATH-like_dom,pfscan_CARD	pfam_CARD,superfamily_DEATH-like_dom,pfscan_CARD	-	no_errors	CARD9	HGNC	ENSG00000187796				13	0	0	10	4	28.5714
NOTCH1	0	genome.wustl.edu	37	9	139405214	139405214	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	139405214	139405214	C	T	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	silent	c.2631	p.P877	0.734	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400				66	0	0	20	22	52.381
RABL6	0	genome.wustl.edu	37	9	139731890	139731890	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	139731890	139731890	T	C	SNP	RABL6	ENST00000371663	human	ensembl	74_37	+1	known	missense	c.905	p.V302A	0.047	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,prints_Small_GTPase	-	no_errors	RABL6	HGNC	ENSG00000196642				16	0	0	12	4	25
TRAF2	0	genome.wustl.edu	37	9	139815649	139815649	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	139815649	139815649	C	T	SNP	TRAF2	ENST00000359662	human	ensembl	74_37	+1	known	missense	c.1276	p.P426S	0.997	superfamily_TRAF-like,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF2	HGNC	ENSG00000127191				89	0	0	53	4	7.01754
GRIN1	0	genome.wustl.edu	37	9	140055596	140055596	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	140055596	140055596	A	G	SNP	GRIN1	ENST00000371561	human	ensembl	74_37	+1	known	missense	c.1286	p.D429G	0.995	NULL	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_CaM-bd_C0_NMDA_rcpt_NR1,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN1	HGNC	ENSG00000176884				54	0	0	32	6	15.7895
EHMT1	0	genome.wustl.edu	37	9	140672443	140672443	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	140672443	140672443	G	A	SNP	EHMT1	ENST00000460843	human	ensembl	74_37	+1	known	missense	c.2128	p.G710S	0.647	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT1	HGNC	ENSG00000181090				135	0	0	84	22	20.7547
CACNA1B	0	genome.wustl.edu	37	9	140773593	140773593	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	140773593	140773593	G	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	silent	c.372	p.T124	0.754	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				51	0	0	42	6	12.5
CACNA1B	0	genome.wustl.edu	37	9	140946568	140946568	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	140946568	140946568	T	C	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	silent	c.3738	p.N1246	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				22	0	0	30	3	9.09091
CACNA1B	0	genome.wustl.edu	37	9	140948361	140948361	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	140948361	140948361	C	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.3874	p.L1292I	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				238	0	0	190	14	6.86275
FREM1	0	genome.wustl.edu	37	9	14737553	14737553	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	14737553	14737553	G	A	SNP	FREM1	ENST00000380881	human	ensembl	74_37	-1	known	silent	c.6384	p.I2128	0.005	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Calx_beta,superfamily_C-type_lectin_fold,superfamily_Cadherin-like,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	FREM1	HGNC	ENSG00000164946				16	0	0	5	6	54.5455
CBWD1	0	genome.wustl.edu	37	9	164038	164038	+	Splice_Site	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	164038	164038	C	G	SNP	CBWD1	ENST00000356521	human	ensembl	74_37	-1	known	splice_site	c.431-1	e5-1	1.000	-	-	-	no_errors	CBWD1	HGNC	ENSG00000172785				142	0	0	121	7	5.46875
SCARNA8	0	genome.wustl.edu	37	9	19063681	19063681	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	19063681	19063681	C	T	SNP	SCARNA8	ENST00000515924	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SCARNA8	HGNC	ENSG00000251733				114	0	0	43	24	35.8209
MLLT3	0	genome.wustl.edu	37	9	20413989	20413989	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	20413989	20413989	C	T	SNP	MLLT3	ENST00000380338	human	ensembl	74_37	-1	known	silent	c.855	p.P285	0.991	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843				238	0	0	119	31	20.6667
PTPLAD2	0	genome.wustl.edu	37	9	21029383	21029383	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	21029383	21029383	G	A	SNP	PTPLAD2	ENST00000495827	human	ensembl	74_37	-1	known	missense	c.53	p.A18V	0.036	NULL	pfam_Tyr_Pase-like_PTPLA	-	no_errors	PTPLAD2	HGNC	ENSG00000188921				93	0	0	26	17	39.5349
IFNW1	0	genome.wustl.edu	37	9	21141445	21141445	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	21141445	21141445	T	C	SNP	IFNW1	ENST00000380229	human	ensembl	74_37	-1	known	missense	c.125	p.H42R	0.003	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNW1	HGNC	ENSG00000177047				236	0	0	112	73	39.4595
KLHL9	0	genome.wustl.edu	37	9	21333640	21333640	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	21333640	21333640	G	A	SNP	KLHL9	ENST00000359039	human	ensembl	74_37	-1	known	missense	c.1219	p.R407C	0.991	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL9	HGNC	ENSG00000198642				84	0	0	50	35	41.1765
DNAJB5	0	genome.wustl.edu	37	9	34996747	34996747	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	34996747	34996747	G	A	SNP	DNAJB5	ENST00000454002	human	ensembl	74_37	+1	known	missense	c.913	p.A305T	1.000	superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB5	HGNC	ENSG00000137094				39	0	0	43	9	17.3077
VCP	0	genome.wustl.edu	37	9	35062112	35062112	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	35062112	35062112	G	A	SNP	VCP	ENST00000358901	human	ensembl	74_37	-1	known	silent	c.969	p.R323	0.998	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	pfam_ATPase_AAA_core,pfam_CDC4_N-term_subdom,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Cdc48_dom2,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_Vps4_C,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	-	no_errors	VCP	HGNC	ENSG00000165280				126	0	0	51	45	46.875
TLN1	0	genome.wustl.edu	37	9	35706862	35706862	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	35706862	35706862	G	A	SNP	TLN1	ENST00000314888	human	ensembl	74_37	-1	known	missense	c.4991	p.A1664V	1.000	NULL	pfam_Talin_cent,pfam_Vinculin-bd_dom,pfam_ILWEQ_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN1	HGNC	ENSG00000137076				75	0	0	49	20	28.9855
GBA2	0	genome.wustl.edu	37	9	35737837	35737837	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	35737837	35737837	G	A	SNP	GBA2	ENST00000545786	human	ensembl	74_37	-1	known	nonsense	c.2431	p.Q811*	1.000	pfam_Glucosylceramidase,superfamily_6-hairpin_glycosidase-like,pirsf_Beta_glucosidase_GBA2-type	pfam_Glucosylceramidase,pfam_GBA2_N,superfamily_6-hairpin_glycosidase-like,pirsf_Beta_glucosidase_GBA2-type	-	no_errors	GBA2	HGNC	ENSG00000070610				85	0	0	72	4	5.26316
OR13J1	0	genome.wustl.edu	37	9	35869823	35869823	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	35869823	35869823	C	T	SNP	OR13J1	ENST00000377981	human	ensembl	74_37	-1	known	silent	c.576	p.T192	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR13J1	HGNC	ENSG00000168828				76	0	0	56	31	35.6322
DOCK8	0	genome.wustl.edu	37	9	420992	420992	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	420992	420992	A	C	SNP	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	missense	c.4067	p.K1356T	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099				135	0	0	49	34	40.9639
CBWD6	0	genome.wustl.edu	37	9	69247573	69247573	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	69247573	69247573	C	T	SNP	CBWD6	ENST00000377457	human	ensembl	74_37	-1	known	missense	c.439	p.A147T	1.000	pfam_CobW/HypB/UreG_dom,superfamily_P-loop_NTPase	pfam_CobW/HypB/UreG_dom,pfam_Cbl_biosynth_CobW-like_C,superfamily_P-loop_NTPase,superfamily_Cbl_biosynth_CobW-like_C,smart_Cbl_biosynth_CobW-like_C	-	no_errors	CBWD6	HGNC	ENSG00000204790				74	0	0	59	4	6.34921
PGM5	0	genome.wustl.edu	37	9	70993121	70993121	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	70993121	70993121	C	T	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	nonsense	c.268	p.R90*	0.949	pfam_A-D-PHexomutase_a/b/a-I,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330				83	0	0	88	6	6.38298
PGM5	0	genome.wustl.edu	37	9	70993145	70993145	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	70993145	70993145	A	G	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	missense	c.292	p.I98V	1.000	pfam_A-D-PHexomutase_a/b/a-I,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330				86	0	0	75	10	11.7647
KDM4C	0	genome.wustl.edu	37	9	7103815	7103815	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	7103815	7103815	A	G	SNP	KDM4C	ENST00000381309	human	ensembl	74_37	+1	known	missense	c.2555	p.D852G	0.999	superfamily_Znf_FYVE_PHD,smart_Znf_PHD	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077				89	0	0	57	5	8.06452
KANK1	0	genome.wustl.edu	37	9	738434	738434	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	738434	738434	C	T	SNP	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	silent	c.3483	p.N1161	0.981	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104				106	0	0	59	13	18.0556
PSAT1	0	genome.wustl.edu	37	9	80919716	80919716	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	80919716	80919716	T	A	SNP	PSAT1	ENST00000376588	human	ensembl	74_37	+1	known	missense	c.257	p.V86D	1.000	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	-	no_errors	PSAT1	HGNC	ENSG00000135069				150	0	0	104	6	5.45455
TLE4	0	genome.wustl.edu	37	9	82191133	82191133	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	82191133	82191133	C	A	SNP	TLE4	ENST00000461758	human	ensembl	74_37	+1	known	missense	c.293	p.T98N	0.000	NULL	pfam_Groucho/TLE_N	-	no_errors	TLE4	HGNC	ENSG00000106829				36	0	0	21	16	43.2432
NTRK2	0	genome.wustl.edu	37	9	87342632	87342632	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	87342632	87342632	C	T	SNP	NTRK2	ENST00000277120	human	ensembl	74_37	+1	known	missense	c.917	p.T306I	1.000	pfam_Ig_I-set	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_LRR-contain_N,superfamily_Kinase-like_dom,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_NGF_rcpt,prints_Tyr_kin_neurotrophic_rcpt_2	-	no_errors	NTRK2	HGNC	ENSG00000148053				88	0	0	37	18	32.7273
S1PR3	0	genome.wustl.edu	37	9	91616825	91616825	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	91616825	91616825	G	A	SNP	S1PR3	ENST00000358157	human	ensembl	74_37	+1	known	missense	c.710	p.R237Q	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_EDG3_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn,prints_EDG1_rcpt,prints_Cnbnoid_rcpt	-	no_errors	S1PR3	HGNC	ENSG00000213694				90	0	0	62	18	22.5
DIRAS2	0	genome.wustl.edu	37	9	93376078	93376078	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	93376078	93376078	G	A	SNP	DIRAS2	ENST00000375765	human	ensembl	74_37	-1	known	missense	c.32	p.A11V	1.000	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	DIRAS2	HGNC	ENSG00000165023				237	0	0	115	62	35.0282
OGN	0	genome.wustl.edu	37	9	95152157	95152157	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	95152157	95152157	T	C	SNP	OGN	ENST00000262551	human	ensembl	74_37	-1	known	silent	c.609	p.G203	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	OGN	HGNC	ENSG00000106809				64	0	0	20	11	35.4839
ECM2	0	genome.wustl.edu	37	9	95267870	95267870	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	95267870	95267870	C	T	SNP	ECM2	ENST00000344604	human	ensembl	74_37	-1	known	missense	c.1409	p.R470H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_VWF_C,smart_VWF_C,smart_Leu-rich_rpt_typical-subtyp,pfscan_VWF_C	-	no_errors	ECM2	HGNC	ENSG00000106823				134	0	0	54	41	43.1579
HIATL1	0	genome.wustl.edu	37	9	97216241	97216241	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	97216241	97216241	C	T	SNP	HIATL1	ENST00000375344	human	ensembl	74_37	+1	known	missense	c.917	p.T306M	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Tet-R_TetA/multi-R_MdtG	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	HIATL1	HGNC	ENSG00000148110				77	0	0	23	14	37.8378
SLC35D2	0	genome.wustl.edu	37	9	99084346	99084346	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	99084346	99084346	T	C	SNP	SLC35D2	ENST00000253270	human	ensembl	74_37	-1	known	missense	c.848	p.Y283C	1.000	pfam_Tpt_PEP_trans_dom	pfam_Tpt_PEP_trans_dom,pfam_UAA	-	no_errors	SLC35D2	HGNC	ENSG00000130958				78	0	0	58	7	10.7692
BTK	0	genome.wustl.edu	37	X	100608101	100608101	+	RNA	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	100608101	100608101	A	G	SNP	BTK	ENST00000470069	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	BTK	HGNC	ENSG00000010671				93	0	0	68	18	20.9302
GLA	0	genome.wustl.edu	37	X	100656740	100656740	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	100656740	100656740	C	T	SNP	GLA	ENST00000218516	human	ensembl	74_37	-1	known	missense	c.427	p.A143T	1.000	pfam_Glyco_hydro_GHD,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_GHD,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_27	-	no_errors	GLA	HGNC	ENSG00000102393				189	0	0	73	31	29.8077
WWC3	0	genome.wustl.edu	37	X	10107541	10107541	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	10107541	10107541	G	T	SNP	WWC3	ENST00000380861	human	ensembl	74_37	+1	known	missense	c.3173	p.G1058V	0.999	NULL	superfamily_C2_dom	-	no_errors	WWC3	HGNC	ENSG00000047644				146	0	0	63	41	39.4231
BEX5	0	genome.wustl.edu	37	X	101409129	101409129	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	101409129	101409129	C	T	SNP	BEX5	ENST00000333643	human	ensembl	74_37	-1	known	missense	c.109	p.G37R	0.055	pfam_TF_A-like/BEX-like,pirsf_BEX	pfam_TF_A-like/BEX-like,pirsf_BEX	-	no_errors	BEX5	HGNC	ENSG00000184515				152	0	0	63	41	39.4231
GPRASP1	0	genome.wustl.edu	37	X	101912464	101912464	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	101912464	101912464	C	T	SNP	GPRASP1	ENST00000361600	human	ensembl	74_37	+1	known	missense	c.3623	p.P1208L	0.858	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP1	HGNC	ENSG00000198932				114	0	0	64	5	7.24638
IRS4	0	genome.wustl.edu	37	X	107977919	107977919	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	107977919	107977919	G	A	SNP	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	silent	c.1656	p.T552	0.000	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124				242	0	0	166	80	32.5203
ACSL4	0	genome.wustl.edu	37	X	108926679	108926679	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	108926679	108926679	G	A	SNP	ACSL4	ENST00000340800	human	ensembl	74_37	-1	known	silent	c.37	p.L13	1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL4	HGNC	ENSG00000068366				127	1	0.78125	57	33	36.6667
HCCS	0	genome.wustl.edu	37	X	11133048	11133048	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	11133048	11133048	A	C	SNP	HCCS	ENST00000321143	human	ensembl	74_37	+1	known	missense	c.194	p.E65A	1.000	pfam_Cyt_C/C1_haem_lyase	pfam_Cyt_C/C1_haem_lyase	-	no_errors	HCCS	HGNC	ENSG00000004961				153	0	0	101	18	15.1261
AGTR2	0	genome.wustl.edu	37	X	115304470	115304470	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	115304470	115304470	G	A	SNP	AGTR2	ENST00000371906	human	ensembl	74_37	+1	known	missense	c.937	p.V313I	0.556	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_ATII_AT2_rcpt,prints_GPCR_Rhodpsn,prints_ATII_rcpt,prints_Brdyknn_rcpt,prints_Chemokine_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	AGTR2	HGNC	ENSG00000180772				270	0	0	101	53	34.4156
C1GALT1C1	0	genome.wustl.edu	37	X	119760807	119760807	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	119760807	119760807	A	G	SNP	C1GALT1C1	ENST00000304661	human	ensembl	74_37	-1	known	missense	c.215	p.I72T	1.000	NULL	NULL	-	no_errors	C1GALT1C1	HGNC	ENSG00000171155				116	1	0.854701	23	33	58.9286
THOC2	0	genome.wustl.edu	37	X	122767863	122767863	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	122767863	122767863	C	G	SNP	THOC2	ENST00000245838	human	ensembl	74_37	-1	known	missense	c.2077	p.E693Q	1.000	NULL	pfam_THO_THOC2_C,pfam_THO_THOC2_N	-	no_errors	THOC2	HGNC	ENSG00000125676				113	0	0	53	28	34.5679
DCAF12L2	0	genome.wustl.edu	37	X	125299809	125299809	+	Silent	SNP	T	T	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	125299809	125299809	T	G	SNP	DCAF12L2	ENST00000360028	human	ensembl	74_37	-1	known	silent	c.99	p.G33	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L2	HGNC	ENSG00000198354				62	0	0	32	19	37.2549
FRMPD4	0	genome.wustl.edu	37	X	12736157	12736157	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	12736157	12736157	G	A	SNP	FRMPD4	ENST00000380682	human	ensembl	74_37	+1	known	missense	c.3212	p.R1071Q	0.425	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ,pfscan_WW_dom	-	no_errors	FRMPD4	HGNC	ENSG00000169933				98	0	0	122	33	21.2903
PRPS2	0	genome.wustl.edu	37	X	12840909	12840909	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	12840909	12840909	G	A	SNP	PRPS2	ENST00000398491	human	ensembl	74_37	+1	known	silent	c.960	p.P320	0.236	NULL	pfam_PRibTrfase_dom,tigrfam_Rib-P_diPkinase	-	no_errors	PRPS2	HGNC	ENSG00000101911				62	0	0	56	6	9.67742
FAM45B	0	genome.wustl.edu	37	X	129629871	129629871	+	RNA	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	129629871	129629871	G	T	SNP	FAM45B	ENST00000592932	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FAM45B	HGNC	ENSG00000221930				124	0	0	90	26	22.4138
FAM127A	0	genome.wustl.edu	37	X	134166474	134166474	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	134166474	134166474	C	T	SNP	FAM127A	ENST00000257013	human	ensembl	74_37	+1	novel	missense	c.61	p.R21C	0.001	NULL	NULL	-	no_errors	FAM127A	HGNC	ENSG00000134590				141	0	0	132	8	5.71429
SAGE1	0	genome.wustl.edu	37	X	134989589	134989589	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	134989589	134989589	C	T	SNP	SAGE1	ENST00000324447	human	ensembl	74_37	+1	known	missense	c.995	p.P332L	0.001	NULL	NULL	-	no_errors	SAGE1	HGNC	ENSG00000181433				147	0	0	54	9	14.2857
SLC9A6	0	genome.wustl.edu	37	X	135126867	135126867	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	135126867	135126867	G	A	SNP	SLC9A6	ENST00000370695	human	ensembl	74_37	+1	known	missense	c.2090	p.R697K	0.998	NULL	pfam_Cation/H_exchanger,prints_Na/H_exchanger_6,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A6	HGNC	ENSG00000198689				122	0	0	56	4	6.66667
GPR112	0	genome.wustl.edu	37	X	135494468	135494468	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	135494468	135494468	C	T	SNP	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	missense	c.8980	p.R2994W	0.997	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920				75	0	0	28	4	12.5
F9	0	genome.wustl.edu	37	X	138643970	138643970	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	138643970	138643970	C	T	SNP	F9	ENST00000218099	human	ensembl	74_37	+1	known	missense	c.1126	p.L376F	0.149	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_FX,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_GLA_domain,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Peptidase_S1,pirsf_Pept_S1A_FX,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F9	HGNC	ENSG00000101981				136	0	0	75	5	6.25
SOX3	0	genome.wustl.edu	37	X	139586054	139586054	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	139586054	139586054	C	T	SNP	SOX3	ENST00000370536	human	ensembl	74_37	-1	known	missense	c.1172	p.R391H	1.000	NULL	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX3	HGNC	ENSG00000134595				26	0	0	10	14	58.3333
SPANXD	0	genome.wustl.edu	37	X	140785702	140785702	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	140785702	140785702	C	T	SNP	SPANXD	ENST00000370515	human	ensembl	74_37	-1	known	missense	c.214	p.A72T	0.008	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXD	HGNC	ENSG00000196406				336	0	0	109	54	33.1288
FMR1	0	genome.wustl.edu	37	X	147010206	147010206	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	147010206	147010206	T	C	SNP	FMR1	ENST00000370475	human	ensembl	74_37	+1	known	silent	c.300	p.D100	1.000	pfam_Agenet-like_dom	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FMR1	HGNC	ENSG00000102081				97	0	0	58	6	9.375
AFF2	0	genome.wustl.edu	37	X	148048440	148048440	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	148048440	148048440	G	A	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.3034	p.A1012T	0.641	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				129	0	0	98	66	40.2439
IDS	0	genome.wustl.edu	37	X	148564565	148564565	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	148564565	148564565	A	G	SNP	IDS	ENST00000340855	human	ensembl	74_37	-1	known	silent	c.1365	p.G455	0.000	superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	IDS	HGNC	ENSG00000010404				137	0	0	74	24	24.4898
MTM1	0	genome.wustl.edu	37	X	149818248	149818248	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	149818248	149818248	A	G	SNP	MTM1	ENST00000370396	human	ensembl	74_37	+1	known	silent	c.927	p.L309	1.000	NULL	pfam_Myotubularin-like_Pase_dom,pfam_GRAM,smart_GRAM,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTM1	HGNC	ENSG00000171100				128	0	0	63	37	37
GPR50	0	genome.wustl.edu	37	X	150348483	150348483	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	150348483	150348483	G	A	SNP	GPR50	ENST00000218316	human	ensembl	74_37	+1	known	missense	c.428	p.R143H	0.983	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Melatonin_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Mel_rcpt_1X,prints_GPCR_Rhodpsn,prints_Melatonin_rcpt,prints_NPY_rcpt	-	no_errors	GPR50	HGNC	ENSG00000102195				106	1	0.934579	104	7	6.30631
GABRA3	0	genome.wustl.edu	37	X	151366135	151366135	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	151366135	151366135	T	A	SNP	GABRA3	ENST00000370314	human	ensembl	74_37	-1	known	nonsense	c.901	p.R301*	0.999	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABBAa3_rcpt,prints_GABAA_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRA3	HGNC	ENSG00000011677				78	0	0	54	7	11.4754
ZNF275	0	genome.wustl.edu	37	X	152612854	152612854	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	152612854	152612854	C	T	SNP	ZNF275	ENST00000440091	human	ensembl	74_37	+1	known	silent	c.801	p.F267	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF275	HGNC	ENSG00000063587				145	0	0	82	58	41.4286
ABCD1	0	genome.wustl.edu	37	X	152994806	152994806	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	152994806	152994806	C	T	SNP	ABCD1	ENST00000218104	human	ensembl	74_37	+1	known	silent	c.1020	p.S340	0.971	pfam_ABC_Peroxi_TM,superfamily_ABC1_TM_dom,tigrfam_FA_transporter	pfam_ABC_Peroxi_TM,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_FA_transporter	-	no_errors	ABCD1	HGNC	ENSG00000101986				137	0	0	64	32	33.3333
PLXNB3	0	genome.wustl.edu	37	X	153040502	153040502	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	153040502	153040502	C	T	SNP	PLXNB3	ENST00000538966	human	ensembl	74_37	+1	known	missense	c.4168	p.R1390C	0.998	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Plexin_repeat,pfam_Semap_dom,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB3	HGNC	ENSG00000198753				51	0	0	49	7	12.5
DNASE1L1	0	genome.wustl.edu	37	X	153631131	153631131	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	153631131	153631131	G	A	SNP	DNASE1L1	ENST00000014935	human	ensembl	74_37	-1	known	nonsense	c.826	p.Q276*	0.001	NULL	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_DNase_I,pirsf_DNase_I,prints_DNase_I	-	no_errors	DNASE1L1	HGNC	ENSG00000013563				58	0	0	35	17	32.6923
PLXNA3	0	genome.wustl.edu	37	X	153691740	153691740	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	153691740	153691740	G	A	SNP	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	missense	c.1324	p.V442I	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827				258	0	0	176	13	6.87831
PLXNA3	0	genome.wustl.edu	37	X	153699010	153699010	+	RNA	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	153699010	153699010	C	T	SNP	PLXNA3	ENST00000493546	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PLXNA3	HGNC	ENSG00000130827				62	0	0	41	31	43.0556
G6PD	0	genome.wustl.edu	37	X	153761218	153761218	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	153761218	153761218	G	A	SNP	G6PD	ENST00000369620	human	ensembl	74_37	-1	known	silent	c.1128	p.R376	0.000	pfam_G6P_DH_C,pirsf_G6P_DH	pfam_G6P_DH_C,pfam_G6P_DH_NAD-bd,pirsf_G6P_DH,prints_G6P_DH	-	no_errors	G6PD	HGNC	ENSG00000160211				143	0	0	54	42	43.75
SNORA56	0	genome.wustl.edu	37	X	154003362	154003362	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	154003362	154003362	G	A	SNP	SNORA56	ENST00000383966	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORA56	HGNC	ENSG00000206693				130	0	0	54	42	43.75
ASMTL	0	genome.wustl.edu	37	X	1551188	1551188	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	1551188	1551188	C	A	SNP	ASMTL	ENST00000381317	human	ensembl	74_37	-1	known	missense	c.483	p.W161C	1.000	pfam_Maf,tigrfam_Maf	pfam_Maf,pfam_O_MeTrfase_2,tigrfam_Maf	-	no_errors	ASMTL	HGNC	ENSG00000169093				48	0	0	24	5	17.2414
CDKL5	0	genome.wustl.edu	37	X	18622406	18622406	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	18622406	18622406	A	G	SNP	CDKL5	ENST00000379989	human	ensembl	74_37	+1	known	silent	c.1362	p.K454	0.991	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDKL5	HGNC	ENSG00000008086				203	0	0	216	18	7.69231
ZBED1	0	genome.wustl.edu	37	X	2408419	2408419	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	2408419	2408419	G	A	SNP	ZBED1	ENST00000381218	human	ensembl	74_37	-1	known	silent	c.342	p.A114	0.000	NULL	pfam_HATC_dom_C,pfam_Znf_BED_prd,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED1	HGNC	ENSG00000214717				74	0	0	56	24	30
ARX	0	genome.wustl.edu	37	X	25033714	25033714	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	25033714	25033714	C	T	SNP	ARX	ENST00000379044	human	ensembl	74_37	-1	known	silent	c.141	p.A47	1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom,prints_Antifreeze_1	-	no_errors	ARX	HGNC	ENSG00000004848				53	0	0	18	5	21.7391
PPP2R3B	0	genome.wustl.edu	37	X	301654	301654	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	301654	301654	G	A	SNP	PPP2R3B	ENST00000390665	human	ensembl	74_37	-1	known	silent	c.1197	p.C399	1.000	pfscan_EF_hand_dom	pfscan_EF_hand_dom	-	no_errors	PPP2R3B	HGNC	ENSG00000167393				123	0	0	48	25	34.2466
MAGEB4	0	genome.wustl.edu	37	X	30260375	30260375	+	Silent	SNP	T	T	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	30260375	30260375	T	A	SNP	MAGEB4	ENST00000378982	human	ensembl	74_37	+1	known	silent	c.123	p.S41	0.000	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB4	HGNC	ENSG00000120289				47	0	0	37	9	19.5652
NR0B1	0	genome.wustl.edu	37	X	30327190	30327190	+	Silent	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	30327190	30327190	G	T	SNP	NR0B1	ENST00000378970	human	ensembl	74_37	-1	known	silent	c.291	p.P97	0.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	-	no_errors	NR0B1	HGNC	ENSG00000169297				74	0	0	39	22	36.0656
TAB3	0	genome.wustl.edu	37	X	30873126	30873126	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	30873126	30873126	A	G	SNP	TAB3	ENST00000288422	human	ensembl	74_37	-1	known	missense	c.656	p.I219T	1.000	NULL	pfam_CUE,pfam_Znf_RanBP2,superfamily_UBA-like,smart_CUE,smart_Znf_RanBP2,pfscan_CUE,pfscan_Znf_RanBP2	-	no_errors	TAB3	HGNC	ENSG00000157625				38	0	0	35	2	5.40541
DMD	0	genome.wustl.edu	37	X	32867885	32867885	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	32867885	32867885	C	T	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.146	p.R49H	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pirsf_Dystrophin/utrophin,pfscan_CH-domain	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				112	0	0	34	20	37.037
CXorf22	0	genome.wustl.edu	37	X	35993834	35993834	+	Silent	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	35993834	35993834	A	C	SNP	CXorf22	ENST00000297866	human	ensembl	74_37	+1	known	silent	c.2517	p.L839	0.116	NULL	superfamily_PapD-like	-	no_errors	CXorf22	HGNC	ENSG00000165164				117	0	0	72	29	28.7129
BCOR	0	genome.wustl.edu	37	X	39933920	39933920	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	39933920	39933920	A	G	SNP	BCOR	ENST00000378444	human	ensembl	74_37	-1	known	missense	c.679	p.Y227H	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337				81	0	0	55	35	38.8889
CASK	0	genome.wustl.edu	37	X	41390261	41390261	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	41390261	41390261	T	C	SNP	CASK	ENST00000378163	human	ensembl	74_37	-1	known	missense	c.2519	p.Q840R	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_Prot_kinase_dom,pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Guanylate_kin-like	-	no_errors	CASK	HGNC	ENSG00000147044				73	0	0	34	25	42.3729
NDUFB11	0	genome.wustl.edu	37	X	47003964	47003964	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	47003964	47003964	C	T	SNP	NDUFB11	ENST00000276062	human	ensembl	74_37	-1	known	missense	c.115	p.A39T	0.308	pfam_NADH_UbQ_OxRdtase_ESSS_su	pfam_NADH_UbQ_OxRdtase_ESSS_su	-	no_errors	NDUFB11	HGNC	ENSG00000147123				37	0	0	42	18	30
RBM10	0	genome.wustl.edu	37	X	47030579	47030579	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	47030579	47030579	G	T	SNP	RBM10	ENST00000377604	human	ensembl	74_37	+1	known	missense	c.354	p.E118D	0.849	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM10	HGNC	ENSG00000182872				27	0	0	33	16	32.6531
CDK16	0	genome.wustl.edu	37	X	47088020	47088020	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	47088020	47088020	G	T	SNP	CDK16	ENST00000276052	human	ensembl	74_37	+1	known	missense	c.1652	p.R551L	0.663	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK16	HGNC	ENSG00000102225				93	0	0	68	4	5.55556
ZNF41	0	genome.wustl.edu	37	X	47307846	47307846	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	47307846	47307846	G	A	SNP	ZNF41	ENST00000397050	human	ensembl	74_37	-1	known	silent	c.1353	p.C451	0.099	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF41	HGNC	ENSG00000147124				124	1	0.8	35	32	47.7612
SYN1	0	genome.wustl.edu	37	X	47434574	47434574	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	47434574	47434574	G	A	SNP	SYN1	ENST00000295987	human	ensembl	74_37	-1	known	missense	c.1258	p.R420W	0.999	NULL	pfam_Synapsin_ATP-bd_dom,pfam_Synapsin_pre-ATP-grasp_dom,pfam_Synapsin_P_site,pfam_ATP-grasp_RimK-type,superfamily_PreATP-grasp_dom,prints_Synapsin	-	no_errors	SYN1	HGNC	ENSG00000008056				14	0	0	12	4	25
RBM3	0	genome.wustl.edu	37	X	48434786	48434786	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	48434786	48434786	C	T	SNP	RBM3	ENST00000376755	human	ensembl	74_37	+1	known	missense	c.295	p.R99C	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM3	HGNC	ENSG00000102317				63	0	0	22	7	24.1379
DGKK	0	genome.wustl.edu	37	X	50111965	50111965	+	RNA	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	50111965	50111965	G	T	SNP	DGKK	ENST00000376025	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	DGKK	HGNC	ENSG00000204466				42	0	0	12	9	42.8571
GPR173	0	genome.wustl.edu	37	X	53106174	53106174	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	53106174	53106174	C	T	SNP	GPR173	ENST00000332582	human	ensembl	74_37	+1	known	missense	c.371	p.A124V	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR173	HGNC	ENSG00000184194				90	0	0	84	5	5.61798
ITIH6	0	genome.wustl.edu	37	X	54780118	54780118	+	Silent	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	54780118	54780118	C	A	SNP	ITIH6	ENST00000218436	human	ensembl	74_37	-1	known	silent	c.3318	p.G1106	0.908	NULL	pfam_VIT,pfam_ITI_HC_C,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH6	HGNC	ENSG00000102313				78	0	0	36	20	35.7143
TRO	0	genome.wustl.edu	37	X	54949009	54949009	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	54949009	54949009	A	G	SNP	TRO	ENST00000173898	human	ensembl	74_37	+1	known	splice_site	c.46-2	e2-2	0.750	-	-	-	no_errors	TRO	HGNC	ENSG00000067445				41	0	0	15	7	31.8182
ALAS2	0	genome.wustl.edu	37	X	55035639	55035639	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	55035639	55035639	G	A	SNP	ALAS2	ENST00000330807	human	ensembl	74_37	-1	known	missense	c.1738	p.P580S	1.000	NULL	pfam_Aminotransferase_I/II,pfam_5aminolev_synth_preseq,pfam_Aminotrans_V/Cys_dSase,pfam_Cys/Met-Metab_PyrdxlP-dep_enz,superfamily_PyrdxlP-dep_Trfase,tigrfam_4pyrrol_synth_NH2levulA_synth	-	no_errors	ALAS2	HGNC	ENSG00000158578				32	0	0	12	8	40
FOXR2	0	genome.wustl.edu	37	X	55650415	55650415	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	55650415	55650415	G	T	SNP	FOXR2	ENST00000339140	human	ensembl	74_37	+1	known	missense	c.271	p.G91C	0.004	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXR2	HGNC	ENSG00000189299				70	0	0	63	7	10
DLG3	0	genome.wustl.edu	37	X	69669273	69669273	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	69669273	69669273	C	A	SNP	DLG3	ENST00000194900	human	ensembl	74_37	+1	known	missense	c.527	p.P176H	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ	pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_PDZ_assoc,pfam_MAGUK_PEST_N,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG3	HGNC	ENSG00000082458				102	0	0	40	26	39.3939
NLGN3	0	genome.wustl.edu	37	X	70386936	70386936	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	70386936	70386936	A	G	SNP	NLGN3	ENST00000358741	human	ensembl	74_37	+1	known	missense	c.989	p.Y330C	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN3	HGNC	ENSG00000196338				39	0	0	32	14	30.4348
TAF1	0	genome.wustl.edu	37	X	70613283	70613283	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	70613283	70613283	C	T	SNP	TAF1	ENST00000449580	human	ensembl	74_37	+1	known	missense	c.3181	p.R1061C	1.000	pirsf_TAF1_animal	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1	HGNC	ENSG00000147133				105	0	0	56	4	6.66667
RPS4X	0	genome.wustl.edu	37	X	71495454	71495454	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	71495454	71495454	G	A	SNP	RPS4X	ENST00000316084	human	ensembl	74_37	-1	known	missense	c.202	p.R68W	1.000	pfam_S4_RNA-bd,smart_S4_RNA-bd,pirsf_Ribosomal_S4e,pfscan_S4_RNA-bd	pfam_Ribosomal_S4e_central_region,pfam_Ribosomal_S4e_N,pfam_S4_RNA-bd,pfam_KOW,smart_S4_RNA-bd,pirsf_Ribosomal_S4e,pfscan_S4_RNA-bd	-	no_errors	RPS4X	HGNC	ENSG00000198034				95	0	0	28	16	36.3636
XIST	0	genome.wustl.edu	37	X	73050907	73050907	+	RNA	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	73050907	73050907	G	A	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				31	0	0	16	14	46.6667
KIAA2022	0	genome.wustl.edu	37	X	73963421	73963421	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	73963421	73963421	T	C	SNP	KIAA2022	ENST00000055682	human	ensembl	74_37	-1	known	missense	c.971	p.K324R	1.000	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030				154	0	0	56	30	34.8837
UPRT	0	genome.wustl.edu	37	X	74513339	74513339	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	74513339	74513339	C	T	SNP	UPRT	ENST00000373383	human	ensembl	74_37	+1	known	missense	c.419	p.A140V	1.000	NULL	pfam_PRibTrfase_dom	-	no_errors	UPRT	HGNC	ENSG00000094841				234	1	0.425532	78	36	31.5789
ATRX	0	genome.wustl.edu	37	X	76763847	76763847	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	76763847	76763847	G	A	SNP	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	silent	c.7461	p.S2487	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224				159	0	0	124	14	10.1449
ATP7A	0	genome.wustl.edu	37	X	77258620	77258620	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	77258620	77258620	T	C	SNP	ATP7A	ENST00000341514	human	ensembl	74_37	+1	known	missense	c.1594	p.Y532H	1.000	pfam_HeavyMe-assoc_HMA,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,tigrfam_HMA_Cu_ion-bd	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_Cation_transp_P_typ_ATPase,prints_HG_scavenger,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7A	HGNC	ENSG00000165240				237	0	0	114	12	9.52381
ZCCHC5	0	genome.wustl.edu	37	X	77913465	77913465	+	Silent	SNP	T	T	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	77913465	77913465	T	C	SNP	ZCCHC5	ENST00000321110	human	ensembl	74_37	-1	known	silent	c.453	p.Q151	0.000	NULL	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC5	HGNC	ENSG00000179300				72	0	0	61	4	6.15385
POU3F4	0	genome.wustl.edu	37	X	82763572	82763572	+	Silent	SNP	C	C	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	82763572	82763572	C	T	SNP	POU3F4	ENST00000373200	human	ensembl	74_37	+1	known	silent	c.240	p.D80	1.000	pirsf_Transcription_factor_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F4	HGNC	ENSG00000196767				18	0	0	22	16	42.1053
POU3F4	0	genome.wustl.edu	37	X	82764266	82764266	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	82764266	82764266	G	A	SNP	POU3F4	ENST00000373200	human	ensembl	74_37	+1	known	missense	c.934	p.A312T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,prints_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F4	HGNC	ENSG00000196767				45	0	0	21	19	47.5
NAP1L3	0	genome.wustl.edu	37	X	92928199	92928199	+	Silent	SNP	G	G	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	92928199	92928199	G	A	SNP	NAP1L3	ENST00000373079	human	ensembl	74_37	-1	known	silent	c.105	p.S35	0.999	NULL	pfam_NAP_family	-	no_errors	NAP1L3	HGNC	ENSG00000186310				90	0	0	24	20	45.4545
DIAPH2	0	genome.wustl.edu	37	X	96354737	96354737	+	Silent	SNP	A	A	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	96354737	96354737	A	G	SNP	DIAPH2	ENST00000324765	human	ensembl	74_37	+1	known	silent	c.2292	p.L764	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH2	HGNC	ENSG00000147202				52	0	0	16	9	36
SRPX2	0	genome.wustl.edu	37	X	99920365	99920365	+	Silent	SNP	A	A	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	99920365	99920365	A	C	SNP	SRPX2	ENST00000373004	human	ensembl	74_37	+1	known	silent	c.658	p.R220	1.000	pfam_Hyalin,pfscan_Hyalin	pfam_Hyalin,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,superfamily_Thioredoxin-like_fold,smart_Sushi_SCR_CCP,pfscan_Hyalin,pfscan_Sushi_SCR_CCP	-	no_errors	SRPX2	HGNC	ENSG00000102359				19	0	0	14	7	33.3333
DPH5	0	genome.wustl.edu	37	1	101467107	101467107	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	101467107	101467107	A	-	DEL	DPH5	ENST00000370109	human	ensembl	74_37	-1	known	frame_shift_del	c.406	p.W136fs	1.000	pfam_4pyrrol_Mease,superfamily_4pyrrol_Mease,pirsf_Dphthn_synthase,tigrfam_Dphthn_synthase	pfam_4pyrrol_Mease,superfamily_4pyrrol_Mease,pirsf_Dphthn_synthase,tigrfam_Dphthn_synthase	-	no_errors	DPH5	HGNC	ENSG00000117543				35	0	0	22	7	24.1379
WDR47	0	genome.wustl.edu	37	1	109556514	109556515	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	109556514	109556515	-	A	INS	WDR47	ENST00000400794	human	ensembl	74_37	-1	known	frame_shift_ins	c.276_275	p.L92fs	1.000:1.000	smart_CTLH_C,pfscan_CTLH_C	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_CTLH_C,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_CTLH_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR47	HGNC	ENSG00000085433				118	0	0	71	19	21.1111
AMIGO1	0	genome.wustl.edu	37	1	110050474	110050477	+	Frame_Shift_Del	DEL	ACAG	ACAG	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	ACAG	ACAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	110050474	110050477	ACAG	-	DEL	AMIGO1	ENST00000369862	human	ensembl	74_37	-1	known	frame_shift_del	c.1061_1058	p.S353fs	1.000:1.000:0.856:0.999	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_Ig_I-set,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	AMIGO1	HGNC	ENSG00000181754				113	0	0	90	30	25
TTLL10	0	genome.wustl.edu	37	1	1116223	1116223	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	1116223	1116223	G	-	DEL	TTLL10	ENST00000379289	human	ensembl	74_37	+1	known	frame_shift_del	c.738	p.V249fs	0.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL10	HGNC	ENSG00000162571				13	0	0	13	4	23.5294
WNT2B	0	genome.wustl.edu	37	1	113057511	113057511	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	113057511	113057511	G	-	DEL	WNT2B	ENST00000369684	human	ensembl	74_37	+1	known	frame_shift_del	c.198	p.A68fs	1.000	prints_Wnt2	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt2	-	no_errors	WNT2B	HGNC	ENSG00000134245				96	0	0	67	31	31.6327
ADAM30	0	genome.wustl.edu	37	1	120437823	120437823	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	120437823	120437823	A	-	DEL	ADAM30	ENST00000369400	human	ensembl	74_37	-1	known	frame_shift_del	c.1137	p.F379fs	0.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM30	HGNC	ENSG00000134249				180	0	0	92	52	36.1111
NOTCH2	0	genome.wustl.edu	37	1	120612003	120612004	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	120612003	120612004	GG	-	DEL	NOTCH2	ENST00000256646	human	ensembl	74_37	-1	known	frame_shift_del	c.18_17	p.P6fs	0.101:0.700	pirsf_Notch	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250				40	0	0	33	8	19.5122
MTMR11	0	genome.wustl.edu	37	1	149900986	149900989	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	149900986	149900989	AAAA	-	DEL	MTMR11	ENST00000466496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.002:0.003:0.001	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				58	0	0	48	10	17.2414
MTMR11	0	genome.wustl.edu	37	1	149902648	149902648	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	149902648	149902648	A	-	DEL	MTMR11	ENST00000492824	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				26	0	0	22	12	35.2941
RPRD2	0	genome.wustl.edu	37	1	150445908	150445908	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	150445908	150445908	T	-	DEL	RPRD2	ENST00000492220	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.276	-	-	-	no_errors	RPRD2	HGNC	ENSG00000163125				14	0	0	21	4	16
ADAMTSL4	0	genome.wustl.edu	37	1	150531044	150531044	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	150531044	150531044	C	-	DEL	ADAMTSL4	ENST00000369039	human	ensembl	74_37	+1	known	frame_shift_del	c.2547	p.P851fs	0.033	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL4	HGNC	ENSG00000143382				146	0	0	92	60	39.4737
HORMAD1	0	genome.wustl.edu	37	1	150686528	150686529	+	RNA	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	150686528	150686529	-	A	INS	HORMAD1	ENST00000476530	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.036	-	-	-	no_errors	HORMAD1	HGNC	ENSG00000143452				68	0	0	26	20	43.4783
LINGO4	0	genome.wustl.edu	37	1	151774033	151774033	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	151774033	151774033	G	-	DEL	LINGO4	ENST00000368820	human	ensembl	74_37	-1	known	frame_shift_del	c.1148	p.P383fs	1.000	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO4	HGNC	ENSG00000213171				63	0	0	82	27	24.7706
TRIM46	0	genome.wustl.edu	37	1	155152179	155152179	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	155152179	155152179	C	-	DEL	TRIM46	ENST00000334634	human	ensembl	74_37	+1	known	frame_shift_del	c.1357	p.H455fs	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM46	HGNC	ENSG00000163462				64	0	0	58	16	21.6216
ASH1L	0	genome.wustl.edu	37	1	155449752	155449753	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	155449752	155449753	-	T	INS	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	frame_shift_ins	c.2909_2908	p.I970fs	0.992:1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				86	0	0	67	29	30.2083
MIB2	0	genome.wustl.edu	37	1	1564067	1564067	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	1564067	1564067	G	-	DEL	MIB2	ENST00000505820	human	ensembl	74_37	+1	known	frame_shift_del	c.2512	p.D840fs	0.999	smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Mib_Herc2,pfam_Ankyrin_rpt,pfam_Znf_ZZ,superfamily_Ankyrin_rpt-contain_dom,smart_Znf_ZZ,smart_Ankyrin_rpt,smart_Znf_RING,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_RING,pfscan_Znf_ZZ,prints_Ankyrin_rpt	-	no_errors	MIB2	HGNC	ENSG00000197530				9	0	0	5	5	50
SLAMF9	0	genome.wustl.edu	37	1	159923935	159923936	+	RNA	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	159923935	159923936	-	C	INS	SLAMF9	ENST00000489098	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.113:0.094	-	-	-	no_errors	SLAMF9	HGNC	ENSG00000162723				55	0	0	54	7	11.4754
COPA	0	genome.wustl.edu	37	1	160261217	160261218	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	160261217	160261218	-	GA	INS	COPA	ENST00000368069	human	ensembl	74_37	-1	known	frame_shift_ins	c.3355_3354	p.N1118fs	1.000:1.000	pfam_Coatomer_asu_C,pirsf_Coatomer_asu	pfam_Coatomer_asu_C,pfam_Coatomer_WD-assoc_reg,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Coatomer_asu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	COPA	HGNC	ENSG00000122218				107	0	0	82	34	29.3103
EPHA2	0	genome.wustl.edu	37	1	16475133	16475133	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	16475133	16475133	C	-	DEL	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	frame_shift_del	c.563	p.C188fs	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627				136	0	0	64	29	31.1828
UBR4	0	genome.wustl.edu	37	1	19511658	19511658	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	19511658	19511658	T	-	DEL	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	frame_shift_del	c.1873	p.S625fs	1.000	NULL	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481				336	0	0	264	14	5.03597
ENSG00000230260	0	genome.wustl.edu	37	1	197411573	197411573	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	197411573	197411573	A	-	DEL	ENSG00000230260	ENST00000422250	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-75C23.1	Clone_based_vega_gene	ENSG00000230260				20	0	0	22	3	12
DDX59	0	genome.wustl.edu	37	1	200594042	200594042	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	200594042	200594042	T	-	DEL	DDX59	ENST00000447706	human	ensembl	74_37	-1	known	frame_shift_del	c.1730	p.N577fs	0.001	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197				79	0	0	19	21	52.5
CAMSAP2	0	genome.wustl.edu	37	1	200827020	200827020	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	200827020	200827020	A	-	DEL	CAMSAP2	ENST00000236925	human	ensembl	74_37	+1	known	frame_shift_del	c.4303	p.M1437fs	1.000	pfam_CKK_domain,superfamily_PRC_barrel-like	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP2	HGNC	ENSG00000118200				88	0	0	67	10	12.987
IPO9	0	genome.wustl.edu	37	1	201817522	201817523	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	201817522	201817523	-	A	INS	IPO9	ENST00000361565	human	ensembl	74_37	+1	known	frame_shift_ins	c.314_315	p.I107fs	1.000:0.999	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO9	HGNC	ENSG00000198700				95	0	0	53	41	43.617
PLEKHA6	0	genome.wustl.edu	37	1	204210879	204210880	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	204210879	204210880	-	G	INS	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	frame_shift_ins	c.2236_2235	p.R745fs	0.024:0.003	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850				156	0	0	77	72	48.3221
PLEKHA6	0	genome.wustl.edu	37	1	204228411	204228411	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	204228411	204228411	C	-	DEL	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	frame_shift_del	c.982	p.V328fs	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850				64	0	0	75	27	26.4706
CR2	0	genome.wustl.edu	37	1	207642043	207642044	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	207642043	207642044	-	CC	INS	CR2	ENST00000367057	human	ensembl	74_37	+1	known	frame_shift_ins	c.617_618	p.T209fs	0.000:0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322				176	0	0	106	57	34.9693
USP48	0	genome.wustl.edu	37	1	22033386	22033387	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	22033386	22033387	AA	-	DEL	USP48	ENST00000529637	human	ensembl	74_37	-1	novel	frame_shift_del	c.1975_1974	p.S659fs	0.000:0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67,pfscan_Ubiquitin_supergroup	-	no_errors	USP48	HGNC	ENSG00000090686				39	0	0	16	17	51.5152
ENAH	0	genome.wustl.edu	37	1	225707117	225707118	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	225707117	225707118	TC	-	DEL	ENAH	ENST00000366844	human	ensembl	74_37	-1	known	frame_shift_del	c.585_584	p.R195fs	0.964:0.991	NULL	pfam_WH1/EVH1,pfam_VASP_tetra,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	ENAH	HGNC	ENSG00000154380				35	0	0	64	11	14.6667
C1QA	0	genome.wustl.edu	37	1	22965826	22965826	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	22965826	22965826	A	-	DEL	C1QA	ENST00000374642	human	ensembl	74_37	+1	known	frame_shift_del	c.664	p.K223fs	0.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QA	HGNC	ENSG00000173372				79	0	0	49	16	24.6154
ARID4B	0	genome.wustl.edu	37	1	235357476	235357477	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	235357476	235357477	-	T	INS	ARID4B	ENST00000264183	human	ensembl	74_37	-1	known	frame_shift_ins	c.1977_1976	p.N659fs	1.000:0.999	superfamily_Chromodomain-like	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4B	HGNC	ENSG00000054267				79	0	0	50	14	21.875
ENSG00000233735	0	genome.wustl.edu	37	1	240341168	240341168	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	240341168	240341168	T	-	DEL	ENSG00000233735	ENST00000412311	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-567G24.3	Clone_based_vega_gene	ENSG00000233735				20	0	0	11	4	26.6667
KMO	0	genome.wustl.edu	37	1	241753345	241753345	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	241753345	241753345	T	-	DEL	KMO	ENST00000366559	human	ensembl	74_37	+1	known	frame_shift_del	c.1130	p.Q379fs	1.000	NULL	pfam_mOase_FAD-bd,prints_Rng_hydrolase-like	-	no_errors	KMO	HGNC	ENSG00000117009				179	0	0	65	32	32.9897
CEP170	0	genome.wustl.edu	37	1	243388559	243388560	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	243388559	243388560	-	A	INS	CEP170	ENST00000366542	human	ensembl	74_37	-1	known	frame_shift_ins	c.24_23	p.L8fs	1.000:1.000	superfamily_SMAD_FHA_domain	pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_Fibronectin_type3,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170	HGNC	ENSG00000143702				22	0	0	15	8	34.7826
IQCC	0	genome.wustl.edu	37	1	32672862	32672863	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	32672862	32672863	CT	-	DEL	IQCC	ENST00000537469	human	ensembl	74_37	+1	known	frame_shift_del	c.820_821	p.L274fs	0.999:0.996	NULL	pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCC	HGNC	ENSG00000160051				206	0	0	143	8	5.29801
MACF1	0	genome.wustl.edu	37	1	39797891	39797892	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	39797891	39797892	-	A	INS	MACF1	ENST00000567887	human	ensembl	74_37	+1	putative	frame_shift_ins	c.5742_5743	p.I1915fs	0.284:0.656	pfam_Plectin_repeat,superfamily_RNaseH-like_dom,smart_Plectin_repeat	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603				133	0	0	70	35	33.3333
MACF1	0	genome.wustl.edu	37	1	39799059	39799060	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	39799059	39799060	-	G	INS	MACF1	ENST00000567887	human	ensembl	74_37	+1	putative	frame_shift_ins	c.6910_6911	p.E2305fs	0.000:0.000	superfamily_RNaseH-like_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603				138	0	0	75	8	9.63855
ZMPSTE24	0	genome.wustl.edu	37	1	40756543	40756543	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	40756543	40756543	T	-	DEL	ZMPSTE24	ENST00000372759	human	ensembl	74_37	+1	known	frame_shift_del	c.1077	p.L362fs	1.000	pfam_Peptidase_M48	pfam_Peptidase_M48	-	no_errors	ZMPSTE24	HGNC	ENSG00000084073				63	0	0	41	24	36.9231
UROD	0	genome.wustl.edu	37	1	45479967	45479967	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	45479967	45479967	T	-	DEL	UROD	ENST00000472254	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	UROD	HGNC	ENSG00000126088				13	0	0	12	15	55.5556
INADL	0	genome.wustl.edu	37	1	62267407	62267407	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	62267407	62267407	A	-	DEL	INADL	ENST00000371158	human	ensembl	74_37	+1	known	frame_shift_del	c.1515	p.N507fs	0.000	NULL	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_L27,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	INADL	HGNC	ENSG00000132849				113	0	0	54	34	38.6364
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251				54	0	0	19	9	32.1429
PDE4B	0	genome.wustl.edu	37	1	66831383	66831384	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	66831383	66831384	-	T	INS	PDE4B	ENST00000329654	human	ensembl	74_37	+1	known	frame_shift_ins	c.1318_1319	p.A442fs	1.000:1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4B	HGNC	ENSG00000184588				58	0	0	28	10	26.3158
GNG12	0	genome.wustl.edu	37	1	68171151	68171151	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	68171151	68171151	T	-	DEL	GNG12	ENST00000370982	human	ensembl	74_37	-1	known	frame_shift_del	c.202	p.T68fs	1.000	smart_G-protein_gamma-like_dom,pfscan_G-protein_gamma-like_dom	pfam_G-protein_gamma-like_dom,superfamily_G-protein_gamma-like_dom,smart_G-protein_gamma-like_dom,pfscan_G-protein_gamma-like_dom,prints_Gprotein-gamma	-	no_errors	GNG12	HGNC	ENSG00000172380				160	0	0	74	21	22.1053
SRSF11	0	genome.wustl.edu	37	1	70697889	70697890	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	70697889	70697890	-	T	INS	SRSF11	ENST00000370949	human	ensembl	74_37	+1	known	frame_shift_ins	c.96_97	p.L33fs	1.000:1.000	NULL	NULL	-	no_errors	SRSF11	HGNC	ENSG00000116754				26	0	0	15	10	40
CAMTA1	0	genome.wustl.edu	37	1	7724522	7724522	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	7724522	7724522	G	-	DEL	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	frame_shift_del	c.1915	p.G640fs	0.965	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735				396	0	0	273	103	27.3936
RPL5	0	genome.wustl.edu	37	1	93306110	93306112	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	93306110	93306112	GGA	-	DEL	RPL5	ENST00000370321	human	ensembl	74_37	+1	known	in_frame_del	c.708_710	p.E238in_frame_del	1.000:1.000:1.000	NULL	pfam_Ribosomal_L18/L5,prints_Rbsml_L5_euk/L18_arc	-	no_errors	RPL5	HGNC	ENSG00000122406				137	0	0	74	28	27.451
CCDC18	0	genome.wustl.edu	37	1	93667516	93667516	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	93667516	93667516	A	-	DEL	CCDC18	ENST00000557479	human	ensembl	74_37	+1	known	frame_shift_del	c.1120	p.V377fs	1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483				51	0	0	27	5	15.625
ABCD3	0	genome.wustl.edu	37	1	94982784	94982785	+	RNA	DEL	TA	TA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	94982784	94982785	TA	-	DEL	ABCD3	ENST00000464165	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.274:0.002	-	-	-	no_errors	ABCD3	HGNC	ENSG00000117528				12	0	0	12	6	33.3333
AGRN	0	genome.wustl.edu	37	1	979279	979279	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	1	979279	979279	C	-	DEL	AGRN	ENST00000379370	human	ensembl	74_37	+1	known	frame_shift_del	c.1875	p.P627fs	0.185	pfam_Kazal_dom,smart_FacI_MAC,smart_Kazal_dom	pfam_Laminin_G,pfam_Agrin_NtA,pfam_Kazal_dom,pfam_EGF_laminin,pfam_SEA_dom,pfam_EG-like_dom,superfamily_TIMP-like_OB-fold,superfamily_ConA-like_lec_gl_sf,smart_FacI_MAC,smart_Fol_N,smart_Kazal_dom,smart_EG-like_dom,smart_EGF_laminin,smart_SEA_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Agrin_NtA,pfscan_SEA_dom	-	no_errors	AGRN	HGNC	ENSG00000188157				47	0	0	24	9	27.2727
NOLC1	0	genome.wustl.edu	37	10	103919299	103919299	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	103919299	103919299	A	-	DEL	NOLC1	ENST00000405356	human	ensembl	74_37	+1	known	frame_shift_del	c.863	p.K290fs	0.998	NULL	pfam_SRP40_C,pfscan_LisH_dimerisation	-	no_errors	NOLC1	HGNC	ENSG00000166197				57	0	0	42	15	26.3158
GBF1	0	genome.wustl.edu	37	10	104120909	104120909	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	104120909	104120909	A	-	DEL	GBF1	ENST00000476019	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GBF1	HGNC	ENSG00000107862				60	0	0	22	10	31.25
CYP17A1	0	genome.wustl.edu	37	10	104596941	104596942	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	104596941	104596942	-	T	INS	CYP17A1	ENST00000369887	human	ensembl	74_37	-1	known	frame_shift_ins	c.178_177	p.Y59fs	1.000:0.934	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP17A1	HGNC	ENSG00000148795				152	0	0	101	23	18.5484
IDI2	0	genome.wustl.edu	37	10	1065668	1065668	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	1065668	1065668	T	-	DEL	IDI2	ENST00000277517	human	ensembl	74_37	-1	known	frame_shift_del	c.473	p.N158fs	0.557	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	-	no_errors	IDI2	HGNC	ENSG00000148377				103	0	0	95	7	6.86275
TCF7L2	0	genome.wustl.edu	37	10	114849206	114849206	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	114849206	114849206	C	-	DEL	TCF7L2	ENST00000355717	human	ensembl	74_37	+1	known	frame_shift_del	c.531	p.S180fs	1.000	pfam_CTNNB1-bd_N	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7L2	HGNC	ENSG00000148737				46	0	0	30	15	33.3333
KIAA1598	0	genome.wustl.edu	37	10	118713624	118713626	+	In_Frame_Del	DEL	TCA	TCA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	TCA	TCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	118713624	118713626	TCA	-	DEL	KIAA1598	ENST00000392903	human	ensembl	74_37	-1	known	in_frame_del	c.365_363	p.D121in_frame_del	0.980:0.979:0.004	NULL	superfamily_Adenylate_cyclase-assoc_CAP_N	-	no_errors	KIAA1598	HGNC	ENSG00000187164				86	0	0	28	6	17.6471
KIAA1598	0	genome.wustl.edu	37	10	118719757	118719757	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	118719757	118719757	A	-	DEL	KIAA1598	ENST00000490615	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KIAA1598	HGNC	ENSG00000187164				34	0	0	25	3	10.7143
RAB11FIP2	0	genome.wustl.edu	37	10	119798647	119798647	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	119798647	119798647	T	-	DEL	RAB11FIP2	ENST00000369199	human	ensembl	74_37	-1	known	frame_shift_del	c.1101	p.D368fs	1.000	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP2	HGNC	ENSG00000107560				159	0	0	75	42	35.8974
TIAL1	0	genome.wustl.edu	37	10	121335156	121335157	+	RNA	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	121335156	121335157	-	T	INS	TIAL1	ENST00000463089	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.995:0.987	-	-	-	no_errors	TIAL1	HGNC	ENSG00000151923				204	0	0	111	21	15.9091
INPP5F	0	genome.wustl.edu	37	10	121556338	121556339	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	121556338	121556339	-	C	INS	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	frame_shift_ins	c.781_782	p.Q264fs	1.000:1.000	pfam_Syja_N,pfscan_Syja_N	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825				73	0	0	57	5	8.06452
BCCIP	0	genome.wustl.edu	37	10	127520211	127520212	+	RNA	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	127520211	127520212	-	T	INS	BCCIP	ENST00000463330	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	BCCIP	HGNC	ENSG00000107949				48	0	0	24	8	25
FANK1	0	genome.wustl.edu	37	10	127697969	127697969	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	127697969	127697969	A	-	DEL	FANK1	ENST00000368693	human	ensembl	74_37	+1	known	frame_shift_del	c.1000	p.K336fs	0.022	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Fibronectin_type3,prints_Ankyrin_rpt	-	no_errors	FANK1	HGNC	ENSG00000203780				64	0	0	46	7	13.2075
EBF3	0	genome.wustl.edu	37	10	131666125	131666125	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	131666125	131666125	C	-	DEL	EBF3	ENST00000355311	human	ensembl	74_37	-1	known	frame_shift_del	c.833	p.G278fs	1.000	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF3	HGNC	ENSG00000108001				131	0	0	65	21	24.4186
GPR158	0	genome.wustl.edu	37	10	25861746	25861746	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	25861746	25861746	G	-	DEL	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	frame_shift_del	c.1683	p.T564fs	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025				40	0	0	23	15	39.4737
APBB1IP	0	genome.wustl.edu	37	10	26856274	26856274	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	26856274	26856274	C	-	DEL	APBB1IP	ENST00000376236	human	ensembl	74_37	+1	known	frame_shift_del	c.1858	p.A622fs	0.000	NULL	pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc	-	no_errors	APBB1IP	HGNC	ENSG00000077420				10	0	0	2	4	66.6667
ERCC6	0	genome.wustl.edu	37	10	50669423	50669424	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	50669423	50669424	-	C	INS	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	frame_shift_ins	c.3958_3957	p.I1319fs	0.000:0.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830				63	0	0	31	21	40.3846
ENSG00000235939	0	genome.wustl.edu	37	10	50680934	50680934	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	50680934	50680934	A	-	DEL	ENSG00000235939	ENST00000423283	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-123B3.2	Clone_based_vega_gene	ENSG00000235939				34	0	0	12	12	50
ZNF365	0	genome.wustl.edu	37	10	64159513	64159513	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	64159513	64159513	A	-	DEL	ZNF365	ENST00000395254	human	ensembl	74_37	+1	known	frame_shift_del	c.1189	p.K399fs	1.000	NULL	NULL	-	no_errors	ZNF365	HGNC	ENSG00000138311				38	0	0	24	12	33.3333
HERC4	0	genome.wustl.edu	37	10	69750774	69750775	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	69750774	69750775	-	A	INS	HERC4	ENST00000395198	human	ensembl	74_37	-1	known	splice_site_ins	c.1332-3_1332-2	e11-2	0.991:0.227	-	-	-	no_errors	HERC4	HGNC	ENSG00000148634				97	0	0	48	13	21.3115
HNRNPH3	0	genome.wustl.edu	37	10	70097823	70097824	+	RNA	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	70097823	70097824	-	G	INS	HNRNPH3	ENST00000469172	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.959:1.000	-	-	-	no_errors	HNRNPH3	HGNC	ENSG00000096746				34	0	0	29	5	14.7059
LARP4B	0	genome.wustl.edu	37	10	890939	890939	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	890939	890939	T	-	DEL	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	frame_shift_del	c.487	p.T163fs	1.000	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				99	0	0	32	12	27.2727
PTEN	0	genome.wustl.edu	37	10	89717770	89717770	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	89717770	89717770	A	-	DEL	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	frame_shift_del	c.795	p.K267fs	0.994	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862				79	0	0	17	15	46.875
STAMBPL1	0	genome.wustl.edu	37	10	90682146	90682146	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	90682146	90682146	A	-	DEL	STAMBPL1	ENST00000371927	human	ensembl	74_37	+1	known	frame_shift_del	c.1207	p.K405fs	1.000	NULL	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	-	no_errors	STAMBPL1	HGNC	ENSG00000138134				86	0	0	17	13	43.3333
FGFBP3	0	genome.wustl.edu	37	10	93668204	93668205	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	93668204	93668205	-	C	INS	FGFBP3	ENST00000311575	human	ensembl	74_37	-1	known	frame_shift_ins	c.523_522	p.R174fs	0.002:0.000	pfam_FGF1-bd	pfam_FGF1-bd	-	no_errors	FGFBP3	HGNC	ENSG00000174721				17	0	0	14	8	36.3636
IDE	0	genome.wustl.edu	37	10	94294479	94294479	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	94294479	94294479	A	-	DEL	IDE	ENST00000265986	human	ensembl	74_37	-1	known	frame_shift_del	c.347	p.L116fs	1.000	pfam_Pept_M16_N,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	IDE	HGNC	ENSG00000119912				89	0	0	20	20	50
ZNF518A	0	genome.wustl.edu	37	10	97919840	97919840	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	10	97919840	97919840	T	-	DEL	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853				28	0	0	29	12	29.2683
CWF19L2	0	genome.wustl.edu	37	11	107299981	107299981	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	107299981	107299981	T	-	DEL	CWF19L2	ENST00000282251	human	ensembl	74_37	-1	known	frame_shift_del	c.977	p.N326fs	0.000	NULL	pfam_Cwf19-like_C_dom-1,pfam_Cwf19-like_C_dom-2,superfamily_HIT-like	-	no_errors	CWF19L2	HGNC	ENSG00000152404				38	0	0	22	14	38.8889
ATM	0	genome.wustl.edu	37	11	108114817	108114817	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	108114817	108114817	T	-	DEL	ATM	ENST00000278616	human	ensembl	74_37	+1	known	frame_shift_del	c.634	p.S214fs	0.976	NULL	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311				76	0	0	22	18	45
DDX10	0	genome.wustl.edu	37	11	108544239	108544239	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	108544239	108544239	A	-	DEL	DDX10	ENST00000322536	human	ensembl	74_37	+1	known	frame_shift_del	c.232	p.T80fs	0.988	pfscan_RNA_helicase_DEAD_Q_motif	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX10	HGNC	ENSG00000178105				39	0	0	24	7	22.5806
CADM1	0	genome.wustl.edu	37	11	115047097	115047097	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	115047097	115047097	A	-	DEL	CADM1	ENST00000543375	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.997	-	-	-	no_errors	CADM1	HGNC	ENSG00000182985				51	0	0	44	6	12
CEP164	0	genome.wustl.edu	37	11	117222648	117222648	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	117222648	117222648	A	-	DEL	CEP164	ENST00000278935	human	ensembl	74_37	+1	known	frame_shift_del	c.337	p.K116fs	1.000	NULL	superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	CEP164	HGNC	ENSG00000110274				28	0	0	10	18	64.2857
PHLDB1	0	genome.wustl.edu	37	11	118498911	118498911	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	118498911	118498911	C	-	DEL	PHLDB1	ENST00000361417	human	ensembl	74_37	+1	known	frame_shift_del	c.1372	p.L460fs	0.998	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144				249	0	0	141	54	27.6923
TECTA	0	genome.wustl.edu	37	11	121036077	121036077	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	121036077	121036077	C	-	DEL	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	frame_shift_del	c.5368	p.Y1792fs	0.994	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927				15	0	0	9	4	30.7692
ROBO3	0	genome.wustl.edu	37	11	124739422	124739423	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	124739422	124739423	-	C	INS	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	frame_shift_ins	c.564_565	p.R190fs	0.586:0.999	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134				13	0	0	4	3	42.8571
ADAMTS8	0	genome.wustl.edu	37	11	130278728	130278728	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	130278728	130278728	G	-	DEL	ADAMTS8	ENST00000257359	human	ensembl	74_37	-1	known	frame_shift_del	c.1858	p.R620fs	1.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS8,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS8	HGNC	ENSG00000134917				194	1	0.512821	109	35	24.3056
KRTAP5-1	0	genome.wustl.edu	37	11	1606432	1606433	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	1606432	1606433	-	C	INS	KRTAP5-1	ENST00000382171	human	ensembl	74_37	-1	known	frame_shift_ins	c.48_47	p.C17fs	1.000:1.000	NULL	NULL	-	no_errors	KRTAP5-1	HGNC	ENSG00000205869				181	0	0	217	12	5.24017
ARL14EP	0	genome.wustl.edu	37	11	30352754	30352754	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	30352754	30352754	A	-	DEL	ARL14EP	ENST00000282032	human	ensembl	74_37	+1	known	frame_shift_del	c.259	p.N89fs	1.000	NULL	NULL	-	no_errors	ARL14EP	HGNC	ENSG00000152219				127	0	0	79	15	15.9574
PAX6	0	genome.wustl.edu	37	11	31812317	31812317	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	31812317	31812317	G	-	DEL	PAX6	ENST00000379107	human	ensembl	74_37	-1	known	frame_shift_del	c.1166	p.P389fs	1.000	NULL	pfam_Paired_dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,prints_Paired_dom,pfscan_Homeobox_dom,pfscan_Paired_dom	-	no_errors	PAX6	HGNC	ENSG00000007372				95	0	0	47	26	35.6164
NAT10	0	genome.wustl.edu	37	11	34160692	34160692	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	34160692	34160692	A	-	DEL	NAT10	ENST00000530017	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	NAT10	HGNC	ENSG00000135372				59	0	0	31	25	44.6429
PAMR1	0	genome.wustl.edu	37	11	35513670	35513670	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	35513670	35513670	C	-	DEL	PAMR1	ENST00000278360	human	ensembl	74_37	-1	known	frame_shift_del	c.302	p.G101fs	0.999	smart_EG-like_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_EG-like_dom,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1	-	no_errors	PAMR1	HGNC	ENSG00000149090				314	1	0.31746	217	71	24.6528
RAG1	0	genome.wustl.edu	37	11	36597722	36597723	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	36597722	36597723	-	G	INS	RAG1	ENST00000299440	human	ensembl	74_37	+1	known	frame_shift_ins	c.2868_2869	p.A957fs	0.463:1.000	NULL	pfam_Znf_VDJ_recomb-activ_1,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RAG1	HGNC	ENSG00000166349				122	0	0	71	36	33.6449
OR52A1	0	genome.wustl.edu	37	11	5172786	5172786	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	5172786	5172786	A	-	DEL	OR52A1	ENST00000328942	human	ensembl	74_37	-1	known	frame_shift_del	c.814	p.S272fs	0.024	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52A1	HGNC	ENSG00000182070				91	0	0	69	34	33.0097
OR5M3	0	genome.wustl.edu	37	11	56237709	56237709	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	56237709	56237709	T	-	DEL	OR5M3	ENST00000312240	human	ensembl	74_37	-1	known	frame_shift_del	c.265	p.T89fs	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M3	HGNC	ENSG00000174937				139	0	0	70	13	15.6627
OR5AK2	0	genome.wustl.edu	37	11	56757091	56757091	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	56757091	56757091	A	-	DEL	OR5AK2	ENST00000326855	human	ensembl	74_37	+1	known	frame_shift_del	c.703	p.K236fs	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AK2	HGNC	ENSG00000181273				152	0	0	75	21	21.875
OR5B12	0	genome.wustl.edu	37	11	58207028	58207028	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	58207028	58207028	A	-	DEL	OR5B12	ENST00000302572	human	ensembl	74_37	-1	known	frame_shift_del	c.597	p.F199fs	0.000	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR5B12	HGNC	ENSG00000172362				54	0	0	43	20	31.746
EML3	0	genome.wustl.edu	37	11	62378801	62378802	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	62378801	62378802	-	G	INS	EML3	ENST00000529309	human	ensembl	74_37	-1	known	frame_shift_ins	c.210_209	p.G71fs	0.982:1.000	NULL	pfam_HELP,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML3	HGNC	ENSG00000149499				62	0	0	56	9	13.8462
SLC3A2	0	genome.wustl.edu	37	11	62649529	62649529	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	62649529	62649529	A	-	DEL	SLC3A2	ENST00000377892	human	ensembl	74_37	+1	known	frame_shift_del	c.985	p.K331fs	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	-	no_errors	SLC3A2	HGNC	ENSG00000168003				109	1	0.909091	45	19	29.6875
MARK2	0	genome.wustl.edu	37	11	63672263	63672263	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	63672263	63672263	C	-	DEL	MARK2	ENST00000402010	human	ensembl	74_37	+1	known	frame_shift_del	c.1682	p.Q563fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK2	HGNC	ENSG00000072518				156	0	0	79	36	31.3043
FERMT3	0	genome.wustl.edu	37	11	63987799	63987802	+	Splice_Site	DEL	GTGA	GTGA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GTGA	GTGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	63987799	63987802	GTGA	-	DEL	FERMT3	ENST00000279227	human	ensembl	74_37	+1	known	splice_site_del	c.1323+1_1323+1	e10+1	1.000:1.000:0.993:0.955	-	-	-	no_errors	FERMT3	HGNC	ENSG00000149781				192	0	0	150	64	29.9065
MEN1	0	genome.wustl.edu	37	11	64572092	64572093	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	64572092	64572093	-	G	INS	MEN1	ENST00000337652	human	ensembl	74_37	-1	known	frame_shift_ins	c.1562_1561	p.R521fs	1.000:0.999	pfam_Menin	pfam_Menin	-	no_errors	MEN1	HGNC	ENSG00000133895				23	0	0	38	7	15.5556
CDC42BPG	0	genome.wustl.edu	37	11	64591974	64591974	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	64591974	64591974	G	-	DEL	CDC42BPG	ENST00000342711	human	ensembl	74_37	-1	known	frame_shift_del	c.4627	p.L1543fs	0.169	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219				123	0	0	66	15	18.5185
MALAT1	0	genome.wustl.edu	37	11	65270091	65270091	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	65270091	65270091	T	-	DEL	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.911	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				47	0	0	20	15	42.8571
YIF1A	0	genome.wustl.edu	37	11	66052322	66052323	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	66052322	66052323	-	G	INS	YIF1A	ENST00000471387	human	ensembl	74_37	-1	putative	frame_shift_ins	c.328_327	p.I109fs	0.000:0.002	NULL	pfam_Hrf1	-	no_errors	YIF1A	HGNC	ENSG00000174851				67	0	0	75	15	16.6667
DCHS1	0	genome.wustl.edu	37	11	6645397	6645397	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	6645397	6645397	G	-	DEL	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	frame_shift_del	c.7510	p.L2504fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341				33	0	0	24	12	33.3333
C11orf80	0	genome.wustl.edu	37	11	66605851	66605851	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	66605851	66605851	A	-	DEL	C11orf80	ENST00000360962	human	ensembl	74_37	+1	known	frame_shift_del	c.1682	p.K563fs	0.458	NULL	NULL	-	no_errors	C11orf80	HGNC	ENSG00000173715				56	0	0	36	10	21.7391
TPCN2	0	genome.wustl.edu	37	11	68821598	68821598	+	RNA	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	68821598	68821598	G	-	DEL	TPCN2	ENST00000534832	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.011	-	-	-	no_errors	TPCN2	HGNC	ENSG00000162341				33	0	0	26	4	13.3333
ANO1	0	genome.wustl.edu	37	11	69934085	69934085	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	69934085	69934085	G	-	DEL	ANO1	ENST00000355303	human	ensembl	74_37	+1	known	frame_shift_del	c.336	p.E114fs	0.000	NULL	pfam_Anoctamin	-	no_errors	ANO1	HGNC	ENSG00000131620				21	0	0	17	5	22.7273
NLRP14	0	genome.wustl.edu	37	11	7092507	7092509	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	7092507	7092509	GAA	-	DEL	NLRP14	ENST00000299481	human	ensembl	74_37	+1	known	in_frame_del	c.3250_3252	p.E1085in_frame_del	0.301:0.487:0.548	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP14	HGNC	ENSG00000158077				85	0	0	27	7	20.5882
CLPB	0	genome.wustl.edu	37	11	72145303	72145303	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	72145303	72145303	C	-	DEL	CLPB	ENST00000294053	human	ensembl	74_37	-1	known	frame_shift_del	c.216	p.R73fs	0.934	NULL	pfam_ATPase_AAA-2,pfam_Ankyrin_rpt,pfam_Clp_ATPase_C,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,pfam_Zeta_toxin_domain,pfam_Sigma_54_int,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_AAA+_ATPase,prints_ClpA/B,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CLPB	HGNC	ENSG00000162129				68	0	0	42	11	20.7547
RELT	0	genome.wustl.edu	37	11	73106249	73106249	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	73106249	73106249	C	-	DEL	RELT	ENST00000064780	human	ensembl	74_37	+1	known	frame_shift_del	c.1164	p.P390fs	0.843	NULL	pfam_TNF_rcpt_RELT,prints_TNFR_19-like	-	no_errors	RELT	HGNC	ENSG00000054967				106	0	0	50	37	42.5287
ENSG00000254420	0	genome.wustl.edu	37	11	78154811	78154812	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	78154811	78154812	AA	-	DEL	ENSG00000254420	ENST00000534168	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.006	-	-	-	no_errors	RP11-452H21.1	Clone_based_vega_gene	ENSG00000254420				37	0	0	14	19	57.5758
EED	0	genome.wustl.edu	37	11	85961425	85961426	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	85961425	85961426	-	G	INS	EED	ENST00000263360	human	ensembl	74_37	+1	known	frame_shift_ins	c.202_203	p.G72fs	1.000:1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EED	HGNC	ENSG00000074266				94	0	0	91	9	9
SLC36A4	0	genome.wustl.edu	37	11	92899120	92899120	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	92899120	92899120	A	-	DEL	SLC36A4	ENST00000326402	human	ensembl	74_37	-1	known	frame_shift_del	c.831	p.F277fs	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC36A4	HGNC	ENSG00000180773				84	0	0	17	10	37.037
C11orf54	0	genome.wustl.edu	37	11	93486914	93486914	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	11	93486914	93486914	A	-	DEL	C11orf54	ENST00000331239	human	ensembl	74_37	+1	known	frame_shift_del	c.221	p.V77fs	0.016	pfam_DUF1907	pfam_DUF1907	-	no_errors	C11orf54	HGNC	ENSG00000182919				36	0	0	17	6	26.087
CLEC12A	0	genome.wustl.edu	37	12	10131961	10131961	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	10131961	10131961	A	-	DEL	CLEC12A	ENST00000355690	human	ensembl	74_37	+1	known	frame_shift_del	c.247	p.M85fs	0.003	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC12A	HGNC	ENSG00000172322				13	0	0	14	3	17.6471
KLRK1	0	genome.wustl.edu	37	12	10532376	10532376	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	10532376	10532376	A	-	DEL	KLRK1	ENST00000240618	human	ensembl	74_37	-1	known	frame_shift_del	c.164	p.F55fs	0.002	pfam_Herpes_UL45-like	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	KLRK1	HGNC	ENSG00000213809				60	0	0	31	6	16.2162
TPCN1	0	genome.wustl.edu	37	12	113704017	113704017	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	113704017	113704017	C	-	DEL	TPCN1	ENST00000541517	human	ensembl	74_37	+1	known	frame_shift_del	c.486	p.K164fs	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TPCN1	HGNC	ENSG00000186815				297	0	0	286	65	18.5185
HSPB8	0	genome.wustl.edu	37	12	119617377	119617377	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	119617377	119617377	C	-	DEL	HSPB8	ENST00000281938	human	ensembl	74_37	+1	known	frame_shift_del	c.260	p.P89fs	1.000	superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	HSPB8	HGNC	ENSG00000152137				38	0	0	31	52	62.6506
SNRNP35	0	genome.wustl.edu	37	12	123950763	123950764	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	123950763	123950764	GA	-	DEL	SNRNP35	ENST00000412157	human	ensembl	74_37	+1	known	frame_shift_del	c.691_692	p.R234fs	1.000:0.993	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SNRNP35	HGNC	ENSG00000184209				59	0	0	98	8	7.54717
POLE	0	genome.wustl.edu	37	12	133249248	133249248	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	133249248	133249248	C	-	DEL	POLE	ENST00000320574	human	ensembl	74_37	-1	known	frame_shift_del	c.1651	p.V551fs	1.000	smart_DNA-dir_DNA_pol_B	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084				164	0	0	90	38	29.6875
CHFR	0	genome.wustl.edu	37	12	133418085	133418085	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	133418085	133418085	A	-	DEL	CHFR	ENST00000535527	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CHFR	HGNC	ENSG00000072609				63	0	0	50	11	18.0328
CACNA1C-AS1	0	genome.wustl.edu	37	12	2786184	2786184	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	2786184	2786184	A	-	DEL	CACNA1C-AS1	ENST00000501371	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.778	-	-	-	no_errors	CACNA1C-AS1	HGNC	ENSG00000246627				8	0	0	5	7	58.3333
FAR2	0	genome.wustl.edu	37	12	29450110	29450110	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	29450110	29450110	A	-	DEL	FAR2	ENST00000182377	human	ensembl	74_37	+1	known	frame_shift_del	c.522	p.I177fs	0.992	pfam_Male_sterile_NAD-bd,pfam_Epimerase_deHydtase	pfam_Male_sterile_NAD-bd,pfam_FAR,pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase,pfam_Polysac_CapD-like	-	no_errors	FAR2	HGNC	ENSG00000064763				184	1	0.540541	97	55	36.1842
BICD1	0	genome.wustl.edu	37	12	32480462	32480463	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	32480462	32480463	-	G	INS	BICD1	ENST00000281474	human	ensembl	74_37	+1	known	frame_shift_ins	c.1073_1074	p.A360fs	1.000:1.000	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc,superfamily_SPOC_like_C_dom	-	no_errors	BICD1	HGNC	ENSG00000151746				91	0	0	68	50	42.3729
SLC2A13	0	genome.wustl.edu	37	12	40153972	40153972	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	40153972	40153972	T	-	DEL	SLC2A13	ENST00000280871	human	ensembl	74_37	-1	known	frame_shift_del	c.1803	p.K601fs	0.913	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,superfamily_Plexin-like_fold,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A13	HGNC	ENSG00000151229				47	0	0	54	7	11.4754
KDM5A	0	genome.wustl.edu	37	12	416953	416953	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	416953	416953	T	-	DEL	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	frame_shift_del	c.3597	p.G1200fs	0.987	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614				157	0	0	85	47	35.6061
RAD51AP1	0	genome.wustl.edu	37	12	4653063	4653063	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	4653063	4653063	A	-	DEL	RAD51AP1	ENST00000228843	human	ensembl	74_37	+1	known	frame_shift_del	c.202	p.R70fs	0.997	NULL	NULL	-	no_errors	RAD51AP1	HGNC	ENSG00000111247				30	0	0	40	15	27.2727
SLC38A1	0	genome.wustl.edu	37	12	46598325	46598325	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	46598325	46598325	A	-	DEL	SLC38A1	ENST00000398637	human	ensembl	74_37	-1	known	frame_shift_del	c.695	p.F232fs	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A1	HGNC	ENSG00000111371				203	0	0	95	27	22.1311
DAZAP2	0	genome.wustl.edu	37	12	51632733	51632733	+	RNA	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	51632733	51632733	G	-	DEL	DAZAP2	ENST00000549497	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.030	-	-	-	no_errors	DAZAP2	HGNC	ENSG00000183283				46	0	0	67	18	21.1765
ANKRD33	0	genome.wustl.edu	37	12	52285148	52285149	+	RNA	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	52285148	52285149	-	C	INS	ANKRD33	ENST00000547119	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ANKRD33	HGNC	ENSG00000167612				9	0	0	12	17	58.6207
ITGA7	0	genome.wustl.edu	37	12	56092301	56092301	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	56092301	56092301	C	-	DEL	ITGA7	ENST00000555728	human	ensembl	74_37	-1	known	frame_shift_del	c.1190	p.G397fs	1.000	pfam_FG-GAP,smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA7	HGNC	ENSG00000135424				119	0	0	142	32	18.3908
LRP1	0	genome.wustl.edu	37	12	57572242	57572242	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	57572242	57572242	G	-	DEL	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	frame_shift_del	c.4462	p.E1490fs	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				136	1	0.729927	82	57	41.0072
DTX3	0	genome.wustl.edu	37	12	58001073	58001073	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	58001073	58001073	C	-	DEL	DTX3	ENST00000551632	human	ensembl	74_37	+1	known	frame_shift_del	c.436	p.L148fs	0.997	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	DTX3	HGNC	ENSG00000178498				11	0	0	16	6	27.2727
METTL1	0	genome.wustl.edu	37	12	58163382	58163383	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	58163382	58163383	-	G	INS	METTL1	ENST00000324871	human	ensembl	74_37	-1	known	frame_shift_ins	c.539_538	p.L180fs	1.000:0.979	pfam_tRNA_(Gua-N-7)_MeTrfase,tigrfam_tRNA_(Gua-N-7)_MeTrfase	pfam_tRNA_(Gua-N-7)_MeTrfase,tigrfam_tRNA_(Gua-N-7)_MeTrfase	-	no_errors	METTL1	HGNC	ENSG00000037897				221	0	0	159	27	14.5161
MON2	0	genome.wustl.edu	37	12	62954329	62954330	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	62954329	62954330	-	A	INS	MON2	ENST00000393630	human	ensembl	74_37	+1	known	frame_shift_ins	c.3471_3472	p.N1158fs	1.000:1.000	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold	-	no_errors	MON2	HGNC	ENSG00000061987				82	0	0	79	10	11.236
NUP107	0	genome.wustl.edu	37	12	69126366	69126366	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	69126366	69126366	A	-	DEL	NUP107	ENST00000401003	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NUP107	HGNC	ENSG00000111581				14	0	0	6	9	60
CD4	0	genome.wustl.edu	37	12	6924043	6924043	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	6924043	6924043	G	-	DEL	CD4	ENST00000011653	human	ensembl	74_37	+1	known	frame_shift_del	c.492	p.K167fs	0.000	pfam_Ig_C2-set,smart_Ig_sub,smart_Ig_sub2	pfam_CD4-extracel,pfam_Ig_C2-set,pfam_Tcell_CD4_Cterm,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_I-set,pfam_NK_rcpt_2B4_Ig_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Ag_CD4	-	no_errors	CD4	HGNC	ENSG00000010610				104	0	0	83	34	29.0598
CNOT2	0	genome.wustl.edu	37	12	70747694	70747704	+	Frame_Shift_Del	DEL	AAAAAAAAAAA	AAAAAAAAAAA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AAAAAAAAAAA	AAAAAAAAAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	70747694	70747704	AAAAAAAAAAA	-	DEL	CNOT2	ENST00000229195	human	ensembl	74_37	+1	known	frame_shift_del	c.1622_1623	p.*541fs	0.996:0.996	NULL	pfam_NOT	-	no_errors	CNOT2	HGNC	ENSG00000111596				53	0	0	53	12	18.4615
APOBEC1	0	genome.wustl.edu	37	12	7805268	7805269	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	7805268	7805269	-	T	INS	APOBEC1	ENST00000229304	human	ensembl	74_37	-1	known	frame_shift_ins	c.208_207	p.F69fs	0.001:0.007	pfam_APOBEC_N,superfamily_Cytidine_deaminase-like	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC1	HGNC	ENSG00000111701				36	0	0	28	8	22.2222
NAV3	0	genome.wustl.edu	37	12	78400806	78400806	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	78400806	78400806	A	-	DEL	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	frame_shift_del	c.1488	p.K498fs	0.960	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798				85	0	0	114	8	6.55738
ALX1	0	genome.wustl.edu	37	12	85695103	85695105	+	In_Frame_Del	DEL	CAA	CAA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CAA	CAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	85695103	85695105	CAA	-	DEL	ALX1	ENST00000316824	human	ensembl	74_37	+1	known	in_frame_del	c.831_833	p.N279in_frame_del	1.000:1.000:1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	ALX1	HGNC	ENSG00000180318				114	0	0	100	16	13.7931
MGAT4C	0	genome.wustl.edu	37	12	86373330	86373330	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	86373330	86373330	T	-	DEL	MGAT4C	ENST00000393205	human	ensembl	74_37	-1	known	frame_shift_del	c.1261	p.I421fs	1.000	NULL	pfam_Glyco_transf_54,superfamily_LSM_dom	-	no_errors	MGAT4C	HGNC	ENSG00000182050				45	0	0	17	17	50
CEP290	0	genome.wustl.edu	37	12	88453675	88453675	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	88453675	88453675	T	-	DEL	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	frame_shift_del	c.6651	p.E2218fs	0.999	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707				12	0	0	15	8	34.7826
A2ML1	0	genome.wustl.edu	37	12	8998751	8998751	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	8998751	8998751	T	-	DEL	A2ML1	ENST00000299698	human	ensembl	74_37	+1	known	frame_shift_del	c.1616	p.S542fs	0.031	pfam_A2M_N_2	pfam_A2M_comp,pfam_Macroglobln_a2,pfam_A2M_N_2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	A2ML1	HGNC	ENSG00000166535				136	0	0	60	45	42.8571
KLRG1	0	genome.wustl.edu	37	12	9142307	9142308	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	9142307	9142308	-	A	INS	KLRG1	ENST00000266551	human	ensembl	74_37	+1	known	frame_shift_ins	c.76_77	p.S28fs	0.065:0.065	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRG1	HGNC	ENSG00000139187				112	0	0	85	15	15
CCDC38	0	genome.wustl.edu	37	12	96292432	96292432	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	12	96292432	96292432	T	-	DEL	CCDC38	ENST00000344280	human	ensembl	74_37	-1	known	frame_shift_del	c.447	p.A150fs	0.125	NULL	NULL	-	no_errors	CCDC38	HGNC	ENSG00000165972				83	0	0	31	37	54.4118
PCCA	0	genome.wustl.edu	37	13	100925452	100925452	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	100925452	100925452	T	-	DEL	PCCA	ENST00000376285	human	ensembl	74_37	+1	known	frame_shift_del	c.917	p.L308fs	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_RimK-type,pfam_ATP-grasp_carboxylate-amine,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_RimK-type,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_Biotin_lipoyl	-	no_errors	PCCA	HGNC	ENSG00000175198				52	0	0	24	18	42.8571
NALCN	0	genome.wustl.edu	37	13	101755523	101755524	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	101755523	101755524	-	A	INS	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	frame_shift_ins	c.3057_3056	p.L1019fs	1.000:1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				161	0	0	80	49	37.9845
ITGBL1	0	genome.wustl.edu	37	13	102105191	102105191	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	102105191	102105191	C	-	DEL	ITGBL1	ENST00000376180	human	ensembl	74_37	+1	known	frame_shift_del	c.7	p.P4fs	0.064	NULL	pfam_EGF_extracell,smart_EG-like_dom	-	no_errors	ITGBL1	HGNC	ENSG00000198542				139	0	0	83	15	15.3061
COL4A2	0	genome.wustl.edu	37	13	111099207	111099207	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	111099207	111099207	A	-	DEL	COL4A2	ENST00000360467	human	ensembl	74_37	+1	known	frame_shift_del	c.1074	p.G360fs	0.000	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A2	HGNC	ENSG00000134871				179	0	0	134	11	7.58621
CDC16	0	genome.wustl.edu	37	13	115012591	115012591	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	115012591	115012591	T	-	DEL	CDC16	ENST00000494581	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CDC16	HGNC	ENSG00000130177				11	0	0	3	7	70
UPF3A	0	genome.wustl.edu	37	13	115057211	115057211	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	115057211	115057211	A	-	DEL	UPF3A	ENST00000375299	human	ensembl	74_37	+1	known	frame_shift_del	c.790	p.E267fs	0.943	NULL	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3A	HGNC	ENSG00000169062				18	0	0	15	10	40
WASF3	0	genome.wustl.edu	37	13	27255387	27255387	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	27255387	27255387	C	-	DEL	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	frame_shift_del	c.913	p.P307fs	0.975	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970				109	1	0.909091	91	27	22.8814
RFC3	0	genome.wustl.edu	37	13	34398063	34398063	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	34398063	34398063	A	-	DEL	RFC3	ENST00000380071	human	ensembl	74_37	+1	known	frame_shift_del	c.235	p.I82fs	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,superfamily_DNA_pol3_clamp-load_cplx_C,smart_AAA+_ATPase	-	no_errors	RFC3	HGNC	ENSG00000133119				28	0	0	17	6	26.087
NBEA	0	genome.wustl.edu	37	13	36125103	36125104	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	36125103	36125104	-	A	INS	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	frame_shift_ins	c.6740_6741	p.V2250fs	0.996:0.214	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				61	0	0	33	21	38.8889
AKAP11	0	genome.wustl.edu	37	13	42874358	42874358	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	42874358	42874358	A	-	DEL	AKAP11	ENST00000025301	human	ensembl	74_37	+1	known	frame_shift_del	c.1476	p.S494fs	0.008	NULL	NULL	-	no_errors	AKAP11	HGNC	ENSG00000023516				104	0	0	96	15	13.5135
ZC3H13	0	genome.wustl.edu	37	13	46543660	46543661	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	46543660	46543661	-	T	INS	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	frame_shift_ins	c.3019_3018	p.R1006fs	1.000:0.998	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200				68	0	0	47	21	30.8824
RCBTB1	0	genome.wustl.edu	37	13	50140831	50140831	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	50140831	50140831	T	-	DEL	RCBTB1	ENST00000258646	human	ensembl	74_37	-1	known	frame_shift_del	c.200	p.K67fs	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,pfam_BTB_POZ,superfamily_RCC1/BLIP-II,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RCBTB1	HGNC	ENSG00000136144				115	0	0	43	24	35.8209
VPS36	0	genome.wustl.edu	37	13	53000038	53000038	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	53000038	53000038	A	-	DEL	VPS36	ENST00000492650	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	VPS36	HGNC	ENSG00000136100				58	0	0	32	14	30.4348
TDRD3	0	genome.wustl.edu	37	13	61102847	61102848	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	61102847	61102848	-	A	INS	TDRD3	ENST00000535286	human	ensembl	74_37	+1	known	frame_shift_ins	c.1488_1489	p.R498fs	1.000:1.000	NULL	pfam_DUF1767,pfam_Tudor,pfam_Survival_motor_neuron,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,smart_Tudor,pfscan_Tudor,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TDRD3	HGNC	ENSG00000083544				120	0	0	94	9	8.73786
PIBF1	0	genome.wustl.edu	37	13	73357634	73357634	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	73357634	73357634	A	-	DEL	PIBF1	ENST00000326291	human	ensembl	74_37	+1	known	frame_shift_del	c.27	p.V12fs	0.060	NULL	superfamily_t-SNARE	-	no_errors	PIBF1	HGNC	ENSG00000083535				107	0	0	76	14	15.5556
MYCBP2	0	genome.wustl.edu	37	13	77725047	77725048	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	13	77725047	77725048	-	T	INS	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	frame_shift_ins	c.6953_6952	p.M2318fs	1.000:1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810				137	0	0	88	22	20
CDC42BPB	0	genome.wustl.edu	37	14	103447224	103447224	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	103447224	103447224	A	-	DEL	CDC42BPB	ENST00000361246	human	ensembl	74_37	-1	known	frame_shift_del	c.1026	p.F342fs	1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	CDC42BPB	HGNC	ENSG00000198752				126	0	0	62	41	39.8058
INF2	0	genome.wustl.edu	37	14	105174270	105174271	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	105174270	105174271	-	G	INS	INF2	ENST00000392634	human	ensembl	74_37	+1	known	frame_shift_ins	c.1666_1667	p.V557fs	0.000:0.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485				90	0	0	75	6	7.40741
HOMEZ	0	genome.wustl.edu	37	14	23745310	23745310	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	23745310	23745310	A	-	DEL	HOMEZ	ENST00000431326	human	ensembl	74_37	-1	known	frame_shift_del	c.1133	p.L378fs	1.000	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOMEZ	HGNC	ENSG00000215271				63	0	0	43	17	28.3333
CPNE6	0	genome.wustl.edu	37	14	24545608	24545608	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	24545608	24545608	C	-	DEL	CPNE6	ENST00000537691	human	ensembl	74_37	+1	known	frame_shift_del	c.1263	p.N424fs	0.986	pfam_Copine,smart_VWF_A,pfscan_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE6	HGNC	ENSG00000100884				253	1	0.393701	128	71	35.6784
GZMH	0	genome.wustl.edu	37	14	25075937	25075938	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	25075937	25075938	-	C	INS	GZMH	ENST00000216338	human	ensembl	74_37	-1	known	frame_shift_ins	c.613_612	p.P204fs	0.932:0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	GZMH	HGNC	ENSG00000100450				155	1	0.641026	113	20	15.0376
NKX2-1-AS1	0	genome.wustl.edu	37	14	36988636	36988636	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	36988636	36988636	T	-	DEL	NKX2-1-AS1	ENST00000521292	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NKX2-1-AS1	HGNC	ENSG00000253563				13	0	0	11	5	31.25
MDGA2	0	genome.wustl.edu	37	14	47530771	47530771	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	47530771	47530771	T	-	DEL	MDGA2	ENST00000439988	human	ensembl	74_37	-1	known	frame_shift_del	c.1206	p.G403fs	1.000	NULL	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA2	Uniprot_gn	ENSG00000272781				32	0	0	17	5	22.7273
DACT1	0	genome.wustl.edu	37	14	59112121	59112122	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	59112121	59112122	-	A	INS	DACT1	ENST00000335867	human	ensembl	74_37	+1	known	frame_shift_ins	c.780_781	p.N261fs	0.994:1.000	NULL	NULL	-	no_errors	DACT1	HGNC	ENSG00000165617				114	0	0	60	22	26.8293
SIX4	0	genome.wustl.edu	37	14	61180923	61180924	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	61180923	61180924	-	A	INS	SIX4	ENST00000216513	human	ensembl	74_37	-1	known	splice_site_ins	c.1550-3_1550-2	e3-2	0.998:0.834	-	-	-	no_errors	SIX4	HGNC	ENSG00000100625				50	0	0	15	4	21.0526
SIX4	0	genome.wustl.edu	37	14	61190792	61190792	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	61190792	61190792	T	-	DEL	SIX4	ENST00000216513	human	ensembl	74_37	-1	known	frame_shift_del	c.1	p.M1fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX4	HGNC	ENSG00000100625				159	0	0	78	30	27.7778
ZBTB1	0	genome.wustl.edu	37	14	64989787	64989787	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	64989787	64989787	A	-	DEL	ZBTB1	ENST00000394712	human	ensembl	74_37	+1	known	frame_shift_del	c.1565	p.K524fs	0.222	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB1	HGNC	ENSG00000126804				174	0	0	114	34	22.973
ELMSAN1	0	genome.wustl.edu	37	14	74205773	74205773	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	74205773	74205773	G	-	DEL	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	frame_shift_del	c.939	p.N314fs	0.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030				41	0	0	12	11	47.8261
ELMSAN1	0	genome.wustl.edu	37	14	74205926	74205928	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	74205926	74205928	CTG	-	DEL	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	in_frame_del	c.786_784	p.Q262in_frame_del	1.000:1.000:1.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030				40	0	0	37	10	21.2766
ENTPD5	0	genome.wustl.edu	37	14	74438596	74438596	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	74438596	74438596	C	-	DEL	ENTPD5	ENST00000334696	human	ensembl	74_37	-1	known	frame_shift_del	c.1043	p.G348fs	1.000	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD5	HGNC	ENSG00000187097				154	0	0	97	39	28.6765
YLPM1	0	genome.wustl.edu	37	14	75230471	75230471	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	75230471	75230471	G	-	DEL	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	frame_shift_del	c.279	p.G95fs	0.840	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596				56	0	0	67	18	21.1765
FOXN3	0	genome.wustl.edu	37	14	89878534	89878534	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	89878534	89878534	G	-	DEL	FOXN3	ENST00000261302	human	ensembl	74_37	-1	known	frame_shift_del	c.287	p.P96fs	0.998	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXN3	HGNC	ENSG00000053254				110	0	0	54	28	34.1463
CHGA	0	genome.wustl.edu	37	14	93398988	93398990	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	93398988	93398990	AGG	-	DEL	CHGA	ENST00000216492	human	ensembl	74_37	+1	known	in_frame_del	c.1082_1084	p.E365in_frame_del	0.000:0.000:0.009	pfam_Granin	pfam_Granin,prints_Chromogranin_AB	-	no_errors	CHGA	HGNC	ENSG00000100604				15	0	0	13	3	18.75
ATG2B	0	genome.wustl.edu	37	14	96783572	96783572	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	14	96783572	96783572	T	-	DEL	ATG2B	ENST00000359933	human	ensembl	74_37	-1	known	frame_shift_del	c.3120	p.K1040fs	0.052	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2B	HGNC	ENSG00000066739				70	0	0	30	24	44.4444
ADAMTS17	0	genome.wustl.edu	37	15	100801843	100801844	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	100801843	100801844	-	A	INS	ADAMTS17	ENST00000268070	human	ensembl	74_37	-1	known	splice_site_ins	c.874-3_874-2	e6-2	0.996:0.020	-	-	-	no_errors	ADAMTS17	HGNC	ENSG00000140470				25	0	0	8	5	38.4615
NIPA2	0	genome.wustl.edu	37	15	23021239	23021239	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	23021239	23021239	T	-	DEL	NIPA2	ENST00000337451	human	ensembl	74_37	-1	known	frame_shift_del	c.98	p.K33fs	1.000	pfam_Mg_trans_NIPA	pfam_Mg_trans_NIPA,pfam_DMT	-	no_errors	NIPA2	HGNC	ENSG00000140157				139	0	0	79	30	27.5229
PLA2G4E	0	genome.wustl.edu	37	15	42276068	42276069	+	Frame_Shift_Ins	INS	-	-	AA			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	42276068	42276069	-	AA	INS	PLA2G4E	ENST00000413860	human	ensembl	74_37	-1	known	frame_shift_ins	c.2404_2403	p.D801fs	0.997:0.570	superfamily_Acyl_Trfase/lysoPLipase,pfscan_LysoPLipase_cat_dom	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4E	HGNC	ENSG00000188089				35	0	0	19	6	24
ZNF106	0	genome.wustl.edu	37	15	42742957	42742957	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	42742957	42742957	A	-	DEL	ZNF106	ENST00000263805	human	ensembl	74_37	-1	known	frame_shift_del	c.1444	p.S482fs	0.139	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_Znf_C2H2-like,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ZNF106	HGNC	ENSG00000103994				257	0	0	127	38	23.0303
EIF3J	0	genome.wustl.edu	37	15	44849810	44849811	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	44849810	44849811	-	T	INS	EIF3J	ENST00000261868	human	ensembl	74_37	+1	known	frame_shift_ins	c.533_534	p.L180fs	1.000:1.000	pfam_eIF3j	pfam_eIF3j	-	no_errors	EIF3J	HGNC	ENSG00000104131				70	0	0	41	18	30.5085
ENSG00000259241	0	genome.wustl.edu	37	15	51987960	51987963	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	51987960	51987963	AAAA	-	DEL	ENSG00000259241	ENST00000559918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006:0.012:0.011:0.004	-	-	-	no_errors	RP11-313P18.2	Clone_based_vega_gene	ENSG00000259241				14	0	0	7	4	36.3636
PRTG	0	genome.wustl.edu	37	15	55912892	55912892	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	55912892	55912892	A	-	DEL	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	frame_shift_del	c.3167	p.F1056fs	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	PRTG	HGNC	ENSG00000166450				56	0	0	32	9	21.9512
CA12	0	genome.wustl.edu	37	15	63618547	63618547	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	63618547	63618547	T	-	DEL	CA12	ENST00000178638	human	ensembl	74_37	-1	known	frame_shift_del	c.1002	p.G335fs	1.000	NULL	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA12	HGNC	ENSG00000074410				109	0	0	62	13	17.3333
ZNF609	0	genome.wustl.edu	37	15	64967247	64967247	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	64967247	64967247	A	-	DEL	ZNF609	ENST00000326648	human	ensembl	74_37	+1	known	frame_shift_del	c.2194	p.K734fs	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357				177	0	0	131	82	38.4977
ZNF609	0	genome.wustl.edu	37	15	64970558	64970559	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	64970558	64970559	-	C	INS	ZNF609	ENST00000326648	human	ensembl	74_37	+1	known	frame_shift_ins	c.3646_3647	p.L1218fs	1.000:1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357				176	0	0	108	30	21.7391
DPP8	0	genome.wustl.edu	37	15	65771349	65771350	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	65771349	65771350	-	G	INS	DPP8	ENST00000341861	human	ensembl	74_37	-1	known	frame_shift_ins	c.1373_1372	p.Q458fs	1.000:1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP8	HGNC	ENSG00000074603				58	0	0	28	5	15.1515
UACA	0	genome.wustl.edu	37	15	70959656	70959657	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	70959656	70959657	-	T	INS	UACA	ENST00000322954	human	ensembl	74_37	-1	known	frame_shift_ins	c.3367_3366	p.S1122fs	0.161:0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Prefoldin,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_T_SNARE_dom,prints_Ankyrin_rpt	-	no_errors	UACA	HGNC	ENSG00000137831				153	0	0	92	8	8
SCAMP2	0	genome.wustl.edu	37	15	75146364	75146364	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	75146364	75146364	G	-	DEL	SCAMP2	ENST00000268099	human	ensembl	74_37	-1	known	frame_shift_del	c.223	p.Q75fs	1.000	NULL	pfam_SCAMP	-	no_errors	SCAMP2	HGNC	ENSG00000140497				76	0	0	31	12	27.907
TMC3	0	genome.wustl.edu	37	15	81641861	81641861	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	81641861	81641861	A	-	DEL	TMC3	ENST00000359440	human	ensembl	74_37	-1	known	frame_shift_del	c.1131	p.F377fs	0.998	NULL	pfam_TMC	-	no_errors	TMC3	HGNC	ENSG00000188869				24	0	0	14	8	36.3636
DNM1P51	0	genome.wustl.edu	37	15	84958125	84958126	+	RNA	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	84958125	84958126	-	C	INS	DNM1P51	ENST00000558801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.969:0.836	-	-	-	no_errors	DNM1P51	HGNC	ENSG00000235370				17	0	0	18	7	28
TICRR	0	genome.wustl.edu	37	15	90167670	90167670	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	90167670	90167670	C	-	DEL	TICRR	ENST00000268138	human	ensembl	74_37	+1	known	frame_shift_del	c.4129	p.P1378fs	0.005	NULL	NULL	-	no_errors	TICRR	HGNC	ENSG00000140534				224	0	0	223	16	6.69456
IDH2	0	genome.wustl.edu	37	15	90631917	90631918	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	90631917	90631918	-	C	INS	IDH2	ENST00000330062	human	ensembl	74_37	-1	known	frame_shift_ins	c.436_435	p.T145fs	0.992:0.686	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	-	no_errors	IDH2	HGNC	ENSG00000182054				150	0	0	93	16	14.6789
SLCO3A1	0	genome.wustl.edu	37	15	92706441	92706441	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	15	92706441	92706441	A	-	DEL	SLCO3A1	ENST00000555549	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.813	-	-	-	no_errors	SLCO3A1	HGNC	ENSG00000176463				44	0	0	34	14	29.1667
ABCC1	0	genome.wustl.edu	37	16	16142119	16142120	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	16142119	16142120	-	C	INS	ABCC1	ENST00000399408	human	ensembl	74_37	+1	known	frame_shift_ins	c.1339_1340	p.L449fs	1.000:1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC1	HGNC	ENSG00000103222				135	0	0	67	34	33.6634
SPSB3	0	genome.wustl.edu	37	16	1828187	1828187	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	1828187	1828187	C	-	DEL	SPSB3	ENST00000301717	human	ensembl	74_37	-1	known	frame_shift_del	c.440	p.G147fs	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_SOCS_C,pfscan_B30.2/SPRY,pfscan_SOCS_C	-	no_errors	SPSB3	HGNC	ENSG00000162032				36	0	0	29	9	23.6842
KNOP1	0	genome.wustl.edu	37	16	19722724	19722724	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	19722724	19722724	T	-	DEL	KNOP1	ENST00000219837	human	ensembl	74_37	-1	known	frame_shift_del	c.957	p.G320fs	0.536	NULL	NULL	-	no_errors	KNOP1	HGNC	ENSG00000103550				105	0	0	101	53	34.4156
DCUN1D3	0	genome.wustl.edu	37	16	20871266	20871267	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	20871266	20871267	-	C	INS	DCUN1D3	ENST00000324344	human	ensembl	74_37	-1	known	frame_shift_ins	c.857_856	p.E286fs	1.000:1.000	NULL	pfam_PONY_dom	-	no_errors	DCUN1D3	HGNC	ENSG00000188215				52	0	0	21	13	38.2353
ATXN2L	0	genome.wustl.edu	37	16	28847355	28847356	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	28847355	28847356	-	C	INS	ATXN2L	ENST00000395547	human	ensembl	74_37	+1	known	frame_shift_ins	c.2997_2998	p.Q1001fs	0.552:0.998	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2L	HGNC	ENSG00000168488				163	0	0	90	29	24.3697
MAZ	0	genome.wustl.edu	37	16	29818087	29818087	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	29818087	29818087	G	-	DEL	MAZ	ENST00000219782	human	ensembl	74_37	+1	known	frame_shift_del	c.65	p.V24fs	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	MAZ	HGNC	ENSG00000103495				59	0	0	21	10	32.2581
INO80E	0	genome.wustl.edu	37	16	30007665	30007665	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	30007665	30007665	A	-	DEL	INO80E	ENST00000563197	human	ensembl	74_37	+1	known	frame_shift_del	c.34	p.K14fs	1.000	NULL	NULL	-	no_errors	INO80E	HGNC	ENSG00000169592				12	0	0	12	3	20
ITGAL	0	genome.wustl.edu	37	16	30518138	30518138	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	30518138	30518138	C	-	DEL	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	frame_shift_del	c.2469	p.P825fs	0.110	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844				257	0	0	158	72	31.3043
SRCAP	0	genome.wustl.edu	37	16	30736371	30736371	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	30736371	30736371	C	-	DEL	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	frame_shift_del	c.5626	p.P1878fs	1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603				175	0	0	91	42	31.5789
VPS35	0	genome.wustl.edu	37	16	46695735	46695735	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	46695735	46695735	T	-	DEL	VPS35	ENST00000299138	human	ensembl	74_37	-1	known	frame_shift_del	c.2106	p.A703fs	0.998	pfam_VPS35,superfamily_ARM-type_fold	pfam_VPS35,superfamily_ARM-type_fold	-	no_errors	VPS35	HGNC	ENSG00000069329				167	0	0	72	33	31.4286
LOC101927102	0	genome.wustl.edu	37	16	47196592	47196592	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	47196592	47196592	A	-	DEL	LOC101927102	ENST00000564705	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-329J18.2	Clone_based_vega_gene	ENSG00000260281				65	0	0	43	16	27.1186
CMTM1	0	genome.wustl.edu	37	16	66611099	66611100	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	66611099	66611100	-	G	INS	CMTM1	ENST00000332695	human	ensembl	74_37	+1	known	frame_shift_ins	c.192_193	p.S66fs	0.368:0.986	NULL	NULL	-	no_errors	CMTM1	HGNC	ENSG00000089505				45	0	0	23	7	23.3333
CTCF	0	genome.wustl.edu	37	16	67645338	67645339	+	Frame_Shift_Ins	INS	-	-	AA			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	67645338	67645339	-	AA	INS	CTCF	ENST00000264010	human	ensembl	74_37	+1	known	frame_shift_ins	c.603_604	p.T203fs	1.000:1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCF	HGNC	ENSG00000102974				75	0	0	48	25	34.2466
PRMT7	0	genome.wustl.edu	37	16	68380061	68380062	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	68380061	68380062	GA	-	DEL	PRMT7	ENST00000339507	human	ensembl	74_37	+1	known	frame_shift_del	c.1069_1070	p.R358fs	0.000:0.000	pirsf_Arg_MeTrfase_PRMT7	pfam_Ribosomal-L11_MeTrfase_PrmA,pirsf_Arg_MeTrfase_PRMT7	-	no_errors	PRMT7	HGNC	ENSG00000132600				96	0	0	51	20	28.169
ZFHX3	0	genome.wustl.edu	37	16	72822585	72822586	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	72822585	72822586	-	G	INS	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	frame_shift_ins	c.9590_9589	p.Q3197fs	0.817:0.870	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				157	0	0	109	77	41.3978
ZFHX3	0	genome.wustl.edu	37	16	72991758	72991758	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	72991758	72991758	C	-	DEL	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	frame_shift_del	c.2287	p.E763fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				66	0	0	81	17	17.3469
GSE1	0	genome.wustl.edu	37	16	85682290	85682290	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	85682290	85682290	C	-	DEL	GSE1	ENST00000253458	human	ensembl	74_37	+1	known	frame_shift_del	c.359	p.V123fs	0.999	pfam_GSE-like	pfam_GSE-like	-	no_errors	GSE1	HGNC	ENSG00000131149				138	0	0	96	77	44.5087
ZC3H18	0	genome.wustl.edu	37	16	88691140	88691141	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	88691140	88691141	-	C	INS	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	frame_shift_ins	c.2029_2030	p.R680fs	0.978:0.568	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545				56	0	0	23	8	25.8065
ANKRD11	0	genome.wustl.edu	37	16	89349914	89349916	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	89349914	89349916	CTT	-	DEL	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	in_frame_del	c.3036_3034	p.K1012in_frame_del	0.640:0.951:0.998	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522				188	0	0	98	54	35.5263
GRIN2A	0	genome.wustl.edu	37	16	9857380	9857380	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	16	9857380	9857380	T	-	DEL	GRIN2A	ENST00000330684	human	ensembl	74_37	-1	known	frame_shift_del	c.4021	p.S1341fs	0.070	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454				96	0	0	79	6	7.05882
ENSG00000252305	0	genome.wustl.edu	37	17	14080569	14080570	+	RNA	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	14080569	14080570	-	T	INS	ENSG00000252305	ENST00000516496	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.062:0.108	-	-	-	no_errors	SNORA74	RFAM	ENSG00000252305				11	0	0	9	3	25
ENSG00000205325	0	genome.wustl.edu	37	17	14673543	14673543	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	14673543	14673543	T	-	DEL	ENSG00000205325	ENST00000379640	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	AC005863.1	Clone_based_vega_gene	ENSG00000205325				70	0	0	25	12	32.4324
EPN2	0	genome.wustl.edu	37	17	19232950	19232950	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	19232950	19232950	A	-	DEL	EPN2	ENST00000314728	human	ensembl	74_37	+1	known	frame_shift_del	c.1401	p.T470fs	1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN2	HGNC	ENSG00000072134				98	0	0	45	26	36.6197
SPECC1	0	genome.wustl.edu	37	17	20108263	20108263	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	20108263	20108263	A	-	DEL	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	frame_shift_del	c.901	p.N303fs	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487				128	1	0.775194	58	102	63.75
KSR1	0	genome.wustl.edu	37	17	25910016	25910016	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	25910016	25910016	C	-	DEL	KSR1	ENST00000319524	human	ensembl	74_37	+1	known	frame_shift_del	c.865	p.P291fs	0.999	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	KSR1	HGNC	ENSG00000141068				24	0	0	17	5	22.7273
MYO18A	0	genome.wustl.edu	37	17	27493332	27493332	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	27493332	27493332	G	-	DEL	MYO18A	ENST00000354329	human	ensembl	74_37	-1	known	frame_shift_del	c.627	p.V210fs	0.000	superfamily_PDZ	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_PDZ,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_Regulat_G_prot_signal_superfam,smart_PDZ,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_PDZ,pfscan_RecA_monomer-monomer_interface,prints_Myosin_head_motor_dom	-	no_errors	MYO18A	HGNC	ENSG00000196535				112	0	0	84	39	31.7073
NF1	0	genome.wustl.edu	37	17	29677285	29677285	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	29677285	29677285	A	-	DEL	NF1	ENST00000358273	human	ensembl	74_37	+1	known	frame_shift_del	c.7406	p.N2470fs	1.000	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				99	0	0	48	18	27.2727
LHX1	0	genome.wustl.edu	37	17	35300395	35300395	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	35300395	35300395	C	-	DEL	LHX1	ENST00000254457	human	ensembl	74_37	+1	known	frame_shift_del	c.1188	p.E399fs	1.000	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX1	HGNC	ENSG00000132130				41	0	0	20	10	33.3333
ENSG00000272191	0	genome.wustl.edu	37	17	35300495	35300498	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	35300495	35300498	AAAA	-	DEL	ENSG00000272191	ENST00000607336	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.027:0.005:0.001:0.000	-	-	-	no_errors	RP11-445F12.2	Clone_based_vega_gene	ENSG00000272191				9	0	0	4	4	50
ENSG00000233175	0	genome.wustl.edu	37	17	43317791	43317791	+	RNA	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	43317791	43317791	C	-	DEL	ENSG00000233175	ENST00000393507	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2020K17.3	Clone_based_vega_gene	ENSG00000233175				33	0	0	15	9	37.5
MAPT	0	genome.wustl.edu	37	17	44039781	44039781	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	44039781	44039781	G	-	DEL	MAPT	ENST00000344290	human	ensembl	74_37	+1	known	frame_shift_del	c.78	p.G28fs	0.429	NULL	pfam_MAP_tubulin-bd_rpt,prints_Tau	-	no_errors	MAPT	HGNC	ENSG00000186868				48	0	0	28	12	30
ALOX15	0	genome.wustl.edu	37	17	4544838	4544839	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	4544838	4544839	-	C	INS	ALOX15	ENST00000545513	human	ensembl	74_37	-1	known	frame_shift_ins	c.175_174	p.K58fs	0.000:0.032	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C	-	no_errors	ALOX15	HGNC	ENSG00000161905				48	0	0	41	5	10.8696
CAMTA2	0	genome.wustl.edu	37	17	4875738	4875738	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	4875738	4875738	G	-	DEL	CAMTA2	ENST00000414043	human	ensembl	74_37	-1	known	frame_shift_del	c.2666	p.P889fs	1.000	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA2	HGNC	ENSG00000108509				34	0	0	25	15	37.5
RABEP1	0	genome.wustl.edu	37	17	5281517	5281517	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	5281517	5281517	A	-	DEL	RABEP1	ENST00000262477	human	ensembl	74_37	+1	known	frame_shift_del	c.2261	p.G756fs	1.000	pfam_Rabaptin_Rab5-bd_dom	pfam_Rabaptin_coiled-coil,pfam_Rabaptin_Rab5-bd_dom,prints_Rabaptin	-	no_errors	RABEP1	HGNC	ENSG00000029725				61	0	0	20	12	37.5
TMEM100	0	genome.wustl.edu	37	17	53798136	53798136	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	53798136	53798136	A	-	DEL	TMEM100	ENST00000424486	human	ensembl	74_37	-1	known	frame_shift_del	c.296	p.L99fs	0.994	NULL	NULL	-	no_errors	TMEM100	HGNC	ENSG00000166292				121	0	0	73	29	28.4314
RNF43	0	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	56435161	56435161	C	-	DEL	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	frame_shift_del	c.1976	p.G659fs	0.900	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375				190	0	0	140	38	21.3483
CA4	0	genome.wustl.edu	37	17	58234015	58234017	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	58234015	58234017	CTT	-	DEL	CA4	ENST00000300900	human	ensembl	74_37	+1	known	in_frame_del	c.207_209	p.F72in_frame_del	0.551:0.712:0.713	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA4	HGNC	ENSG00000167434				94	0	0	58	15	20.5479
BCAS3	0	genome.wustl.edu	37	17	59465992	59465992	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	59465992	59465992	A	-	DEL	BCAS3	ENST00000589222	human	ensembl	74_37	+1	known	frame_shift_del	c.2673	p.K894fs	1.000	NULL	pfam_BCAS3,pfam_WD40_repeat	-	no_errors	BCAS3	HGNC	ENSG00000141376				9	0	0	5	3	37.5
HELZ	0	genome.wustl.edu	37	17	65105424	65105425	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	65105424	65105425	-	A	INS	HELZ	ENST00000358691	human	ensembl	74_37	-1	known	frame_shift_ins	c.4297_4296	p.N1432fs	0.394:0.383	NULL	pfam_Znf_CCCH,superfamily_P-loop_NTPase,smart_Znf_CCCH	-	no_errors	HELZ	HGNC	ENSG00000198265				85	0	0	37	19	33.9286
ABCA5	0	genome.wustl.edu	37	17	67256528	67256528	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	67256528	67256528	T	-	DEL	ABCA5	ENST00000392677	human	ensembl	74_37	-1	known	frame_shift_del	c.3593	p.N1198fs	0.021	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA5	HGNC	ENSG00000154265				33	0	0	12	6	33.3333
CHRNB1	0	genome.wustl.edu	37	17	7359206	7359208	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7359206	7359208	CTC	-	DEL	CHRNB1	ENST00000306071	human	ensembl	74_37	+1	known	in_frame_del	c.1311_1313	p.S439in_frame_del	0.992:0.991:0.990	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB1	HGNC	ENSG00000170175				78	0	0	39	21	35
UNK	0	genome.wustl.edu	37	17	73780920	73780922	+	In_Frame_Del	DEL	AAT	AAT	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AAT	AAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	73780920	73780922	AAT	-	DEL	UNK	ENST00000293218	human	ensembl	74_37	+1	known	in_frame_del	c.187_189	p.N64in_frame_del	1.000:1.000:1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	UNK	HGNC	ENSG00000132478				33	0	0	20	7	25.9259
UBE2O	0	genome.wustl.edu	37	17	74388088	74388089	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	74388088	74388089	-	G	INS	UBE2O	ENST00000319380	human	ensembl	74_37	-1	known	frame_shift_ins	c.3053_3052	p.H1018fs	1.000:1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC	ENSG00000175931				21	0	0	26	5	16.129
SNHG16	0	genome.wustl.edu	37	17	74557821	74557821	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	74557821	74557821	T	-	DEL	SNHG16	ENST00000591956	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG16	HGNC	ENSG00000163597				32	0	0	21	3	12.5
ENGASE	0	genome.wustl.edu	37	17	77076398	77076399	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	77076398	77076399	-	T	INS	ENGASE	ENST00000579016	human	ensembl	74_37	+1	known	frame_shift_ins	c.675_676	p.R227fs	1.000:1.000	pfam_Glyco_hydro_85	pfam_Glyco_hydro_85,pfscan_BRCT_dom	-	no_errors	ENGASE	HGNC	ENSG00000167280				91	0	0	68	19	21.8391
DNAH2	0	genome.wustl.edu	37	17	7734796	7734796	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7734796	7734796	C	-	DEL	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	frame_shift_del	c.12548	p.L4185fs	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914				73	0	0	49	16	24.6154
CBX4	0	genome.wustl.edu	37	17	77808750	77808751	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	77808750	77808751	-	G	INS	CBX4	ENST00000269397	human	ensembl	74_37	-1	known	frame_shift_ins	c.691_690	p.N230fs	1.000:1.000	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,prints_Chromo_dom_subgr,pfscan_Chromo_domain/shadow	-	no_errors	CBX4	HGNC	ENSG00000141582				171	0	0	76	29	27.619
CNTROB	0	genome.wustl.edu	37	17	7851880	7851880	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7851880	7851880	G	-	DEL	CNTROB	ENST00000380262	human	ensembl	74_37	+1	known	frame_shift_del	c.2456	p.A821fs	0.981	NULL	NULL	-	no_errors	CNTROB	HGNC	ENSG00000170037				167	0	0	89	32	26.4463
CNTROB	0	genome.wustl.edu	37	17	7852808	7852809	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	7852808	7852809	-	G	INS	CNTROB	ENST00000380262	human	ensembl	74_37	+1	known	frame_shift_ins	c.2758_2759	p.V923fs	0.942:0.940	NULL	NULL	-	no_errors	CNTROB	HGNC	ENSG00000170037				68	0	0	48	16	25
CD7	0	genome.wustl.edu	37	17	80274823	80274823	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	17	80274823	80274823	G	-	DEL	CD7	ENST00000312648	human	ensembl	74_37	-1	known	frame_shift_del	c.117	p.V40fs	0.000	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	CD7	HGNC	ENSG00000173762				70	0	0	40	14	25.9259
AFG3L2	0	genome.wustl.edu	37	18	12370885	12370885	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	12370885	12370885	T	-	DEL	AFG3L2	ENST00000269143	human	ensembl	74_37	-1	known	frame_shift_del	c.255	p.A86fs	0.983	NULL	pfam_Peptidase_M41,pfam_ATPase_AAA_core,pfam_Pept_M41_FtsH_extracell,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	-	no_errors	AFG3L2	HGNC	ENSG00000141385				25	0	0	13	3	18.75
RBBP8	0	genome.wustl.edu	37	18	20572853	20572853	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	20572853	20572853	A	-	DEL	RBBP8	ENST00000327155	human	ensembl	74_37	+1	known	frame_shift_del	c.1063	p.K357fs	0.002	NULL	pfam_CtIP_N,pfam_DNA-repair_Sae2/CtIP	-	no_errors	RBBP8	HGNC	ENSG00000101773				109	0	0	55	10	15.3846
CDH2	0	genome.wustl.edu	37	18	25570159	25570160	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	25570159	25570160	-	T	INS	CDH2	ENST00000269141	human	ensembl	74_37	-1	known	frame_shift_ins	c.1500_1499	p.N500fs	1.000:1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH2	HGNC	ENSG00000170558				140	0	0	56	25	30.8642
THOC1	0	genome.wustl.edu	37	18	265348	265348	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	265348	265348	T	-	DEL	THOC1	ENST00000261600	human	ensembl	74_37	-1	known	frame_shift_del	c.144	p.K48fs	1.000	NULL	pfam_THO_THOC1,pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	-	no_errors	THOC1	HGNC	ENSG00000079134				25	0	0	9	5	35.7143
TRAPPC8	0	genome.wustl.edu	37	18	29453418	29453418	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	29453418	29453418	A	-	DEL	TRAPPC8	ENST00000283351	human	ensembl	74_37	-1	known	frame_shift_del	c.2037	p.F679fs	1.000	NULL	NULL	-	no_errors	TRAPPC8	HGNC	ENSG00000153339				43	0	0	20	7	25.9259
MRO	0	genome.wustl.edu	37	18	48331583	48331584	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	48331583	48331584	-	C	INS	MRO	ENST00000436348	human	ensembl	74_37	-1	known	frame_shift_ins	c.412_411	p.K137fs	0.976:0.996	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MRO	HGNC	ENSG00000134042				120	0	0	53	16	23.1884
MBD2	0	genome.wustl.edu	37	18	51750459	51750459	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	51750459	51750459	G	-	DEL	MBD2	ENST00000256429	human	ensembl	74_37	-1	known	frame_shift_del	c.471	p.G158fs	1.000	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD2	HGNC	ENSG00000134046				38	0	0	27	6	18.1818
ALPK2	0	genome.wustl.edu	37	18	56246440	56246440	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	56246440	56246440	T	-	DEL	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	frame_shift_del	c.1568	p.K523fs	0.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796				370	0	0	151	67	30.7339
LMAN1	0	genome.wustl.edu	37	18	57013194	57013194	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	57013194	57013194	T	-	DEL	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	frame_shift_del	c.912	p.E305fs	0.898	superfamily_HMG_box_dom	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf,superfamily_HMG_box_dom	-	no_errors	LMAN1	HGNC	ENSG00000074695				124	1	0.8	57	45	44.1176
LMAN1	0	genome.wustl.edu	37	18	57013285	57013285	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	57013285	57013285	T	-	DEL	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	splice_site_del	c.823-2	e8-2	1.000	-	-	-	no_errors	LMAN1	HGNC	ENSG00000074695				125	1	0.793651	80	24	23.0769
RTTN	0	genome.wustl.edu	37	18	67697249	67697249	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	67697249	67697249	T	-	DEL	RTTN	ENST00000255674	human	ensembl	74_37	-1	known	frame_shift_del	c.5744	p.K1915fs	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225				143	0	0	71	27	27.551
ZNF407	0	genome.wustl.edu	37	18	72775214	72775216	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	72775214	72775216	AGG	-	DEL	ZNF407	ENST00000299687	human	ensembl	74_37	+1	known	in_frame_del	c.5537_5539	p.E1847in_frame_del	0.000:0.555:0.549	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_U1,pfscan_Znf_C2H2	-	no_errors	ZNF407	HGNC	ENSG00000215421				194	0	0	129	10	7.19424
ZADH2	0	genome.wustl.edu	37	18	72913756	72913756	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	72913756	72913756	C	-	DEL	ZADH2	ENST00000322342	human	ensembl	74_37	-1	known	frame_shift_del	c.749	p.G250fs	1.000	pfam_ADH_C,smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	ZADH2	HGNC	ENSG00000180011				109	0	0	85	29	25.4386
ANKRD12	0	genome.wustl.edu	37	18	9221974	9221975	+	In_Frame_Ins	INS	-	-	TGA			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	18	9221974	9221975	-	TGA	INS	ANKRD12	ENST00000262126	human	ensembl	74_37	+1	known	in_frame_ins	c.920_921	p.311in_frame_insD	1.000:0.998	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD12	HGNC	ENSG00000101745				161	0	0	71	21	22.8261
RAVER1	0	genome.wustl.edu	37	19	10433828	10433828	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	10433828	10433828	C	-	DEL	RAVER1	ENST00000293677	human	ensembl	74_37	-1	known	frame_shift_del	c.1122	p.K375fs	0.999	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RAVER1	HGNC	ENSG00000161847				13	0	0	8	8	50
AP1M2	0	genome.wustl.edu	37	19	10685628	10685628	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	10685628	10685628	G	-	DEL	AP1M2	ENST00000590923	human	ensembl	74_37	-1	known	frame_shift_del	c.1131	p.I378fs	0.935	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP1M2	HGNC	ENSG00000129354				24	0	0	12	5	29.4118
ELAVL3	0	genome.wustl.edu	37	19	11577604	11577605	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	11577604	11577605	-	C	INS	ELAVL3	ENST00000359227	human	ensembl	74_37	-1	known	frame_shift_ins	c.48_47	p.A18fs	1.000:1.000	NULL	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL3	HGNC	ENSG00000196361				21	0	0	29	7	19.4444
ZNF490	0	genome.wustl.edu	37	19	12691724	12691725	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	12691724	12691725	-	T	INS	ZNF490	ENST00000311437	human	ensembl	74_37	-1	known	frame_shift_ins	c.1165_1164	p.P388fs	1.000:1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF490	HGNC	ENSG00000188033				99	0	0	52	22	29.7297
FBXW9	0	genome.wustl.edu	37	19	12800974	12800974	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	12800974	12800974	C	-	DEL	FBXW9	ENST00000380339	human	ensembl	74_37	-1	known	frame_shift_del	c.924	p.P309fs	0.002	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW9	HGNC	ENSG00000132004				35	0	0	28	13	31.7073
DAZAP1	0	genome.wustl.edu	37	19	1425954	1425954	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	1425954	1425954	A	-	DEL	DAZAP1	ENST00000233078	human	ensembl	74_37	+1	known	frame_shift_del	c.541	p.V183fs	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	DAZAP1	HGNC	ENSG00000071626				192	0	0	124	8	6.06061
ZNF66	0	genome.wustl.edu	37	19	20988745	20988745	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	20988745	20988745	A	-	DEL	ZNF66	ENST00000344519	human	ensembl	74_37	+1	known	frame_shift_del	c.339	p.G116fs	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF66	HGNC	ENSG00000160229				41	0	0	53	22	29.3333
TSHZ3	0	genome.wustl.edu	37	19	31769061	31769062	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	31769061	31769062	-	C	INS	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	frame_shift_ins	c.1638_1637	p.Y547fs	1.000:1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297				182	0	0	97	45	31.6901
NFIC	0	genome.wustl.edu	37	19	3449069	3449069	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	3449069	3449069	C	-	DEL	NFIC	ENST00000443272	human	ensembl	74_37	+1	known	frame_shift_del	c.1016	p.Q341fs	0.997	pfam_CTF/NFI	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIC	HGNC	ENSG00000141905				55	0	0	51	18	26.087
KIRREL2	0	genome.wustl.edu	37	19	36357214	36357214	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	36357214	36357214	C	-	DEL	KIRREL2	ENST00000360202	human	ensembl	74_37	+1	known	frame_shift_del	c.1947	p.C652fs	0.003	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL2	HGNC	ENSG00000126259				115	0	0	86	17	16.5049
ZNF790	0	genome.wustl.edu	37	19	37310238	37310238	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	37310238	37310238	T	-	DEL	ZNF790	ENST00000356725	human	ensembl	74_37	-1	known	frame_shift_del	c.1008	p.K336fs	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF790	HGNC	ENSG00000197863				73	0	0	47	12	20.339
ZNF829	0	genome.wustl.edu	37	19	37382841	37382841	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	37382841	37382841	A	-	DEL	ZNF829	ENST00000520965	human	ensembl	74_37	-1	known	frame_shift_del	c.1095	p.L366fs	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF829	HGNC	ENSG00000185869				50	0	0	34	11	24.4444
FAM98C	0	genome.wustl.edu	37	19	38899416	38899416	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	38899416	38899416	G	-	DEL	FAM98C	ENST00000252530	human	ensembl	74_37	+1	known	frame_shift_del	c.944	p.G317fs	1.000	pfam_Uncharacterised_FAM98	pfam_Uncharacterised_FAM98	-	no_errors	FAM98C	HGNC	ENSG00000130244				140	1	0.70922	74	19	20.4301
CIC	0	genome.wustl.edu	37	19	42796882	42796883	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	42796882	42796883	-	C	INS	CIC	ENST00000575354	human	ensembl	74_37	+1	known	frame_shift_ins	c.3340_3341	p.S1117fs	1.000:0.993	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				112	0	0	76	18	19.1489
APOC1	0	genome.wustl.edu	37	19	45419666	45419666	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	45419666	45419666	A	-	DEL	APOC1	ENST00000592885	human	ensembl	74_37	+1	novel	frame_shift_del	c.278	p.T96fs	0.005	NULL	pfam_ApoC-I	-	no_errors	APOC1	HGNC	ENSG00000130208				18	0	0	24	8	25
GIPR	0	genome.wustl.edu	37	19	46184926	46184926	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	46184926	46184926	C	-	DEL	GIPR	ENST00000263281	human	ensembl	74_37	+1	known	frame_shift_del	c.1217	p.A408fs	0.001	NULL	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_GIP_rcpt,prints_GPCR_2_secretin-like	-	no_errors	GIPR	HGNC	ENSG00000010310				58	0	0	41	26	38.806
DMPK	0	genome.wustl.edu	37	19	46274622	46274628	+	Frame_Shift_Del	DEL	CCGTGGC	CCGTGGC	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CCGTGGC	CCGTGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	46274622	46274628	CCGTGGC	-	DEL	DMPK	ENST00000343373	human	ensembl	74_37	-1	known	frame_shift_del	c.1663_1657	p.A553fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	DMPK	HGNC	ENSG00000104936				83	0	0	43	16	27.1186
GLTSCR1	0	genome.wustl.edu	37	19	48197891	48197891	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	48197891	48197891	C	-	DEL	GLTSCR1	ENST00000396720	human	ensembl	74_37	+1	known	frame_shift_del	c.2803	p.P937fs	0.226	NULL	NULL	-	no_errors	GLTSCR1	HGNC	ENSG00000063169				50	0	0	21	10	32.2581
ZNF114	0	genome.wustl.edu	37	19	48789818	48789818	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	48789818	48789818	T	-	DEL	ZNF114	ENST00000315849	human	ensembl	74_37	+1	known	frame_shift_del	c.937	p.Y315fs	0.070	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF114	HGNC	ENSG00000178150				75	0	0	81	25	23.5849
BAX	0	genome.wustl.edu	37	19	49458971	49458971	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	49458971	49458971	G	-	DEL	BAX	ENST00000293288	human	ensembl	74_37	+1	known	frame_shift_del	c.114	p.E41fs	0.588	NULL	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	-	no_errors	BAX	HGNC	ENSG00000087088				113	1	0.877193	52	20	27.7778
MED25	0	genome.wustl.edu	37	19	50333994	50333995	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	50333994	50333995	-	C	INS	MED25	ENST00000312865	human	ensembl	74_37	+1	known	frame_shift_ins	c.951_952	p.F319fs	0.765:0.979	pfam_Mediator_Med25_SD1	pfam_Mediator_Med25_VWA,pfam_Mediator_Med25,pfam_Mediator_Med25_SD1,pfam_Mediator_Med25_NR-box	-	no_errors	MED25	HGNC	ENSG00000104973				102	0	0	74	9	10.8434
PTOV1	0	genome.wustl.edu	37	19	50363526	50363527	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	50363526	50363527	-	G	INS	PTOV1	ENST00000391842	human	ensembl	74_37	+1	known	frame_shift_ins	c.1241_1242	p.*417fs	1.000:1.000	NULL	pfam_Mediator_Med25	-	no_errors	PTOV1	HGNC	ENSG00000104960				30	0	0	33	12	26.6667
POLD1	0	genome.wustl.edu	37	19	50905061	50905061	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	50905061	50905061	C	-	DEL	POLD1	ENST00000440232	human	ensembl	74_37	+1	known	frame_shift_del	c.343	p.P116fs	0.175	NULL	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	-	no_errors	POLD1	HGNC	ENSG00000062822				103	0	0	95	7	6.86275
LIM2	0	genome.wustl.edu	37	19	51890512	51890512	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	51890512	51890512	G	-	DEL	LIM2	ENST00000221973	human	ensembl	74_37	-1	known	frame_shift_del	c.186	p.G63fs	0.000	NULL	pfam_PMP22/EMP/MP20/Claudin,prints_LMIP,prints_PMP22_EMP_MP20	-	no_errors	LIM2	HGNC	ENSG00000105370				169	0	0	97	11	10.1852
LENG1	0	genome.wustl.edu	37	19	54660653	54660654	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	54660653	54660654	-	G	INS	LENG1	ENST00000222224	human	ensembl	74_37	-1	known	frame_shift_ins	c.423_422	p.P142fs	0.000:0.000	NULL	NULL	-	no_errors	LENG1	HGNC	ENSG00000105617				124	0	0	73	35	32.4074
PEG3	0	genome.wustl.edu	37	19	57328919	57328919	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	57328919	57328919	T	-	DEL	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	frame_shift_del	c.891	p.K297fs	0.162	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300				125	0	0	54	5	8.47458
USP29	0	genome.wustl.edu	37	19	57640238	57640239	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	57640238	57640239	-	A	INS	USP29	ENST00000254181	human	ensembl	74_37	+1	known	frame_shift_ins	c.195_196	p.R67fs	0.000:0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP29	HGNC	ENSG00000131864				48	0	0	33	9	21.4286
ZNF416	0	genome.wustl.edu	37	19	58084579	58084579	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	58084579	58084579	A	-	DEL	ZNF416	ENST00000196489	human	ensembl	74_37	-1	known	frame_shift_del	c.693	p.H232fs	0.065	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF416	HGNC	ENSG00000083817				283	1	0.352113	114	54	32.1429
FUT6	0	genome.wustl.edu	37	19	5832343	5832344	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	5832343	5832344	-	G	INS	FUT6	ENST00000592563	human	ensembl	74_37	-1	known	frame_shift_ins	c.236_235	p.R79fs	0.508:0.863	pfam_Glyco_trans_10	pfam_Glyco_trans_10	-	no_errors	FUT6	HGNC	ENSG00000156413				103	0	0	69	23	25
ZNF329	0	genome.wustl.edu	37	19	58640438	58640439	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	58640438	58640439	TC	-	DEL	ZNF329	ENST00000358067	human	ensembl	74_37	-1	known	frame_shift_del	c.433_432	p.K145fs	0.939:0.962	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF329	HGNC	ENSG00000181894				118	0	0	42	25	37.3134
DENND1C	0	genome.wustl.edu	37	19	6468935	6468936	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	6468935	6468936	-	C	INS	DENND1C	ENST00000381480	human	ensembl	74_37	-1	known	frame_shift_ins	c.1437_1436	p.S480fs	0.995:1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1C	HGNC	ENSG00000205744				39	0	0	11	10	47.619
TRIP10	0	genome.wustl.edu	37	19	6750379	6750380	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	6750379	6750380	-	C	INS	TRIP10	ENST00000313244	human	ensembl	74_37	+1	known	frame_shift_ins	c.1472_1473	p.A494fs	0.994:0.994	NULL	pfam_FCH_dom,pfam_SH3_domain,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	TRIP10	HGNC	ENSG00000125733				121	0	0	93	20	17.6991
OR7E24	0	genome.wustl.edu	37	19	9362157	9362157	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	19	9362157	9362157	C	-	DEL	OR7E24	ENST00000456448	human	ensembl	74_37	+1	known	frame_shift_del	c.438	p.L148fs	0.904	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7E24	HGNC	ENSG00000237521				55	0	0	39	19	32.7586
AFF3	0	genome.wustl.edu	37	2	100218011	100218013	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	100218011	100218013	GCT	-	DEL	AFF3	ENST00000356421	human	ensembl	74_37	-1	known	in_frame_del	c.1332_1330	p.S444in_frame_del	1.000:1.000:1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF3	HGNC	ENSG00000144218				20	0	0	12	6	33.3333
ENSG00000231731	0	genome.wustl.edu	37	2	128263364	128263366	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	128263364	128263366	AAA	-	DEL	ENSG00000231731	ENST00000599001	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.233:0.319:0.309	-	-	-	no_errors	AC010976.2	Clone_based_vega_gene	ENSG00000231731				31	0	0	16	28	63.6364
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				122	0	0	28	44	61.1111
MBD5	0	genome.wustl.edu	37	2	149240905	149240905	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	149240905	149240905	C	-	DEL	MBD5	ENST00000407073	human	ensembl	74_37	+1	known	frame_shift_del	c.2745	p.S917fs	1.000	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_PWWP_dom	-	no_errors	MBD5	HGNC	ENSG00000204406				247	0	0	158	39	19.797
TNFAIP6	0	genome.wustl.edu	37	2	152236046	152236049	+	Frame_Shift_Del	DEL	AAAA	AAAA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	152236046	152236049	AAAA	-	DEL	TNFAIP6	ENST00000243347	human	ensembl	74_37	+1	known	frame_shift_del	c.833_834	p.*278fs	0.961:0.953	NULL	pfam_CUB_dom,pfam_Link,superfamily_CUB_dom,superfamily_C-type_lectin_fold,smart_Link,smart_CUB_dom,pfscan_CUB_dom,pfscan_Link,prints_Link	-	no_errors	TNFAIP6	HGNC	ENSG00000123610				33	0	0	29	19	39.5833
RIF1	0	genome.wustl.edu	37	2	152319553	152319553	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	152319553	152319553	A	-	DEL	RIF1	ENST00000243326	human	ensembl	74_37	+1	known	frame_shift_del	c.3519	p.A1176fs	0.019	NULL	pfam_Rif1_N,superfamily_ARM-type_fold	-	no_errors	RIF1	HGNC	ENSG00000080345				58	0	0	38	11	22.449
GALNT5	0	genome.wustl.edu	37	2	158115793	158115793	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	158115793	158115793	C	-	DEL	GALNT5	ENST00000259056	human	ensembl	74_37	+1	known	frame_shift_del	c.1199	p.S402fs	0.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT5	HGNC	ENSG00000136542				91	0	0	68	17	20
MYCN	0	genome.wustl.edu	37	2	16082314	16082314	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	16082314	16082314	C	-	DEL	MYCN	ENST00000281043	human	ensembl	74_37	+1	known	frame_shift_del	c.128	p.P45fs	1.000	pfam_Tscrpt_reg_Myc_N,prints_Tscrpt_reg_Myc	pfam_Tscrpt_reg_Myc_N,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom,prints_Tscrpt_reg_Myc	-	no_errors	MYCN	HGNC	ENSG00000134323				82	0	0	30	13	30.2326
KLHL41	0	genome.wustl.edu	37	2	170371384	170371385	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	170371384	170371385	-	A	INS	KLHL41	ENST00000284669	human	ensembl	74_37	+1	known	frame_shift_ins	c.1289_1290	p.L433fs	0.995:0.085	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL41	HGNC	ENSG00000239474				69	0	0	52	18	25.7143
PPIG	0	genome.wustl.edu	37	2	170493804	170493804	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	170493804	170493804	A	-	DEL	PPIG	ENST00000260970	human	ensembl	74_37	+1	known	frame_shift_del	c.2036	p.K681fs	0.885	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIG	HGNC	ENSG00000138398				69	0	0	37	11	22.9167
RAD51AP2	0	genome.wustl.edu	37	2	17698737	17698737	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	17698737	17698737	T	-	DEL	RAD51AP2	ENST00000399080	human	ensembl	74_37	-1	known	frame_shift_del	c.946	p.T316fs	0.003	NULL	NULL	-	no_errors	RAD51AP2	HGNC	ENSG00000214842				52	0	0	27	5	15.625
HOXD8	0	genome.wustl.edu	37	2	176995417	176995417	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	176995417	176995417	C	-	DEL	HOXD8	ENST00000313173	human	ensembl	74_37	+1	known	frame_shift_del	c.323	p.P110fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	HOXD8	HGNC	ENSG00000175879				70	0	0	56	47	45.6311
ENSG00000271011	0	genome.wustl.edu	37	2	179442293	179442293	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	179442293	179442293	A	-	DEL	ENSG00000271011	ENST00000604215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.038	-	-	-	no_errors	RP11-171I2.5	Clone_based_vega_gene	ENSG00000271011				17	0	0	13	9	40.9091
TTN	0	genome.wustl.edu	37	2	179518956	179518957	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	179518956	179518957	-	T	INS	TTN	ENST00000589042	human	ensembl	74_37	-1	putative	frame_shift_ins	c.38359_38358	p.P12786fs	0.018:0.007	pfam_PPAK_motif,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_PPAK_motif,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				200	1	0.497512	84	33	28.2051
DNAH7	0	genome.wustl.edu	37	2	196866535	196866535	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	196866535	196866535	T	-	DEL	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	frame_shift_del	c.1037	p.K346fs	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997				45	0	0	39	8	17.0213
BMPR2	0	genome.wustl.edu	37	2	203420130	203420130	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	203420130	203420130	A	-	DEL	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	frame_shift_del	c.1742	p.N583fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217				91	0	0	46	9	16.3636
NRP2	0	genome.wustl.edu	37	2	206628531	206628532	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	206628531	206628532	-	G	INS	NRP2	ENST00000360409	human	ensembl	74_37	+1	known	frame_shift_ins	c.2178_2179	p.V727fs	0.991:1.000	pirsf_Neuropilin,pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pirsf_Neuropilin,pfam_CUB_dom,pfam_Coagulation_fac_5/8-C_type_dom,pfam_MAM_dom,pfam_Neuropilin1_C,superfamily_Galactose-bd-like,superfamily_CUB_dom,superfamily_ConA-like_lec_gl_sf,smart_CUB_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_MAM_dom,prints_MAM_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_MAM_dom	-	no_errors	NRP2	HGNC	ENSG00000118257				104	0	0	77	55	41.6667
KANSL1L	0	genome.wustl.edu	37	2	210889881	210889882	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	210889881	210889882	CT	-	DEL	KANSL1L	ENST00000281772	human	ensembl	74_37	-1	known	frame_shift_del	c.2511_2510	p.E837fs	1.000:1.000	NULL	NULL	-	no_errors	KANSL1L	HGNC	ENSG00000144445				175	0	0	62	20	24.3902
KCNE4	0	genome.wustl.edu	37	2	223917787	223917787	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	223917787	223917787	G	-	DEL	KCNE4	ENST00000281830	human	ensembl	74_37	+1	known	frame_shift_del	c.392	p.E133fs	1.000	pfam_K_chnl_volt-dep_bsu_KCNE	pfam_K_chnl_volt-dep_bsu_KCNE,prints_K_chnl_volt-dep_bsu_KCNE	-	no_errors	KCNE4	HGNC	ENSG00000152049				127	0	0	86	7	7.52688
IRS1	0	genome.wustl.edu	37	2	227661671	227661672	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	227661671	227661672	-	A	INS	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	frame_shift_ins	c.1784_1783	p.R595fs	0.011:0.012	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047				93	0	0	45	17	27.4194
AGAP1	0	genome.wustl.edu	37	2	236649676	236649677	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	236649676	236649677	-	C	INS	AGAP1	ENST00000304032	human	ensembl	74_37	+1	known	frame_shift_ins	c.380_381	p.E130fs	1.000:0.952	pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP1	HGNC	ENSG00000157985				52	0	0	46	12	20.6897
HDLBP	0	genome.wustl.edu	37	2	242179467	242179467	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	242179467	242179467	C	-	DEL	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	frame_shift_del	c.2240	p.G747fs	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677				242	0	0	110	28	20.2899
ZFP36L2	0	genome.wustl.edu	37	2	43452622	43452623	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	43452622	43452623	-	C	INS	ZFP36L2	ENST00000282388	human	ensembl	74_37	-1	known	frame_shift_ins	c.321_320	p.G108fs	0.998:1.000	pfam_Tis11B_N	pfam_Tis11B_N,pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZFP36L2	HGNC	ENSG00000152518				44	0	0	12	8	40
MCEE	0	genome.wustl.edu	37	2	71337212	71337212	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	71337212	71337212	T	-	DEL	MCEE	ENST00000244217	human	ensembl	74_37	-1	known	frame_shift_del	c.419	p.K140fs	1.000	pfam_Glyas_Fos-R_dOase_dom,tigrfam_MeMalonyl-CoA_epimerase	pfam_Glyas_Fos-R_dOase_dom,tigrfam_MeMalonyl-CoA_epimerase	-	no_errors	MCEE	HGNC	ENSG00000124370				56	0	0	20	6	23.0769
ZNF638	0	genome.wustl.edu	37	2	71658434	71658434	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	71658434	71658434	T	-	DEL	ZNF638	ENST00000488126	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	ZNF638	HGNC	ENSG00000075292				47	0	0	16	16	50
TPRKB	0	genome.wustl.edu	37	2	73957880	73957881	+	RNA	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	73957880	73957881	-	A	INS	TPRKB	ENST00000485758	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.004	-	-	-	no_errors	TPRKB	HGNC	ENSG00000144034				27	0	0	14	4	22.2222
WBP1	0	genome.wustl.edu	37	2	74687409	74687410	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	74687409	74687410	-	C	INS	WBP1	ENST00000233615	human	ensembl	74_37	+1	known	frame_shift_ins	c.411_412	p.Y140fs	0.119:0.993	pfam_Uncharacterised_WW-bd	pfam_Uncharacterised_WW-bd	-	no_errors	WBP1	HGNC	ENSG00000239779				195	1	0.510204	105	43	29.0541
ANKRD23	0	genome.wustl.edu	37	2	97507820	97507821	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	97507820	97507821	-	G	INS	ANKRD23	ENST00000318357	human	ensembl	74_37	-1	known	frame_shift_ins	c.277_276	p.R92fs	0.876:0.906	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD23	HGNC	ENSG00000163126				160	0	0	131	30	18.6335
EIF5B	0	genome.wustl.edu	37	2	99977673	99977674	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	2	99977673	99977674	-	A	INS	EIF5B	ENST00000289371	human	ensembl	74_37	+1	known	frame_shift_ins	c.309_310	p.Q105fs	1.000:1.000	NULL	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_TIF_IF2_dom3,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417				73	0	0	59	16	21.3333
DZANK1	0	genome.wustl.edu	37	20	18414186	18414189	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	18414186	18414189	AAAA	-	DEL	DZANK1	ENST00000460891	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014:0.025:0.045:0.053	-	-	-	no_errors	DZANK1	HGNC	ENSG00000089091				12	0	0	2	3	60
ZNF337	0	genome.wustl.edu	37	20	25657323	25657324	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	25657323	25657324	-	T	INS	ZNF337	ENST00000252979	human	ensembl	74_37	-1	known	frame_shift_ins	c.601_600	p.A200fs	0.008:0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF337	HGNC	ENSG00000130684				159	0	0	65	49	42.9825
FASTKD5	0	genome.wustl.edu	37	20	3127716	3127717	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	3127716	3127717	-	C	INS	FASTKD5	ENST00000380266	human	ensembl	74_37	-1	known	frame_shift_ins	c.2001_2000	p.F668fs	0.000:0.000	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD5	HGNC	ENSG00000215251				91	0	0	58	29	33.3333
ASIP	0	genome.wustl.edu	37	20	32856834	32856834	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	32856834	32856834	C	-	DEL	ASIP	ENST00000374954	human	ensembl	74_37	+1	known	frame_shift_del	c.260	p.L89fs	0.041	pfam_Agouti,smart_Agouti	pfam_Agouti,superfamily_Agouti_dom,smart_Agouti,pfscan_Agouti_dom	-	no_errors	ASIP	HGNC	ENSG00000101440				24	0	0	13	6	31.5789
RALGAPB	0	genome.wustl.edu	37	20	37146233	37146233	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	37146233	37146233	C	-	DEL	RALGAPB	ENST00000262879	human	ensembl	74_37	+1	known	frame_shift_del	c.1136	p.P381fs	1.000	NULL	superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPB	HGNC	ENSG00000170471				124	0	0	78	22	22
SPEF1	0	genome.wustl.edu	37	20	3759583	3759583	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	3759583	3759583	A	-	DEL	SPEF1	ENST00000463490	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPEF1	HGNC	ENSG00000101222				79	0	0	47	11	18.9655
SRSF6	0	genome.wustl.edu	37	20	42086773	42086773	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	42086773	42086773	A	-	DEL	SRSF6	ENST00000244020	human	ensembl	74_37	+1	known	frame_shift_del	c.100	p.N35fs	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF6	HGNC	ENSG00000124193				48	0	0	40	10	20
MMP9	0	genome.wustl.edu	37	20	44641953	44641953	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	44641953	44641953	C	-	DEL	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	frame_shift_del	c.1390	p.P465fs	0.010	NULL	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985				179	0	0	121	47	27.9762
CD40	0	genome.wustl.edu	37	20	44755294	44755294	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	44755294	44755294	C	-	DEL	CD40	ENST00000372285	human	ensembl	74_37	+1	known	frame_shift_del	c.513	p.L172fs	0.001	smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_5,prints_Fas_rcpt	-	no_errors	CD40	HGNC	ENSG00000101017				104	0	0	54	22	28.9474
DDX27	0	genome.wustl.edu	37	20	47858504	47858504	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	47858504	47858504	A	-	DEL	DDX27	ENST00000371764	human	ensembl	74_37	+1	known	frame_shift_del	c.2065	p.K691fs	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX27	HGNC	ENSG00000124228				137	1	0.724638	68	37	35.2381
FAM65C	0	genome.wustl.edu	37	20	49203727	49203727	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	49203727	49203727	A	-	DEL	FAM65C	ENST00000462842	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM65C	HGNC	ENSG00000042062				29	0	0	7	3	30
DOK5	0	genome.wustl.edu	37	20	53092463	53092463	+	RNA	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	53092463	53092463	G	-	DEL	DOK5	ENST00000491469	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	DOK5	HGNC	ENSG00000101134				21	0	0	26	9	25.7143
PMEPA1	0	genome.wustl.edu	37	20	56227349	56227349	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	56227349	56227349	G	-	DEL	PMEPA1	ENST00000341744	human	ensembl	74_37	-1	known	frame_shift_del	c.624	p.S209fs	0.979	NULL	NULL	-	no_errors	PMEPA1	HGNC	ENSG00000124225				95	0	0	47	12	20.339
CDH26	0	genome.wustl.edu	37	20	58587784	58587785	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	58587784	58587785	AA	-	DEL	CDH26	ENST00000348616	human	ensembl	74_37	+1	known	frame_shift_del	c.2498_2499	p.*833fs	0.000:0.000	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215				44	0	0	25	11	30.5556
ZGPAT	0	genome.wustl.edu	37	20	62366642	62366642	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	20	62366642	62366642	C	-	DEL	ZGPAT	ENST00000328969	human	ensembl	74_37	+1	known	frame_shift_del	c.1183	p.R397fs	0.000	NULL	pfam_G_patch_dom,smart_Znf_CCCH,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	ZGPAT	HGNC	ENSG00000197114				36	0	0	17	7	29.1667
RWDD2B	0	genome.wustl.edu	37	21	30378685	30378685	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	30378685	30378685	A	-	DEL	RWDD2B	ENST00000286777	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RWDD2B	HGNC	ENSG00000156253				21	0	0	11	7	38.8889
SYNJ1	0	genome.wustl.edu	37	21	34029062	34029062	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	34029062	34029062	A	-	DEL	SYNJ1	ENST00000433931	human	ensembl	74_37	-1	known	frame_shift_del	c.2847	p.F949fs	0.999	pfam_DUF1866,pfscan_RRM_dom	pfam_Syja_N,pfam_Endo/exonuclease/phosphatase,pfam_DUF1866,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ1	HGNC	ENSG00000159082				50	0	0	21	6	22.2222
TTC3	0	genome.wustl.edu	37	21	38524243	38524243	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	38524243	38524243	A	-	DEL	TTC3	ENST00000354749	human	ensembl	74_37	+1	known	frame_shift_del	c.2327	p.E779fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like_dom,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670				58	0	0	41	25	37.8788
DSCR9	0	genome.wustl.edu	37	21	38594001	38594001	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	38594001	38594001	A	-	DEL	DSCR9	ENST00000454482	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DSCR9	HGNC	ENSG00000230366				13	0	0	14	3	17.6471
TFF3	0	genome.wustl.edu	37	21	43733676	43733677	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	43733676	43733677	-	G	INS	TFF3	ENST00000291525	human	ensembl	74_37	-1	known	frame_shift_ins	c.298_297	p.K99fs	0.000:0.000	pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,prints_P_trefoil_chordata	pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,prints_P_trefoil_chordata	-	no_errors	TFF3	HGNC	ENSG00000160180				59	0	0	34	14	29.1667
RRP1B	0	genome.wustl.edu	37	21	45096710	45096710	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	45096710	45096710	A	-	DEL	RRP1B	ENST00000340648	human	ensembl	74_37	+1	known	frame_shift_del	c.711	p.V239fs	0.000	NULL	pfam_Nop52	-	no_errors	RRP1B	HGNC	ENSG00000160208				135	0	0	121	9	6.92308
UBE2G2	0	genome.wustl.edu	37	21	46191156	46191157	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	46191156	46191157	AA	-	DEL	UBE2G2	ENST00000477954	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	UBE2G2	HGNC	ENSG00000184787				10	0	0	6	5	45.4545
MCM3AP	0	genome.wustl.edu	37	21	47663396	47663397	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	47663396	47663397	-	G	INS	MCM3AP	ENST00000291688	human	ensembl	74_37	-1	known	frame_shift_ins	c.5279_5278	p.R1760fs	0.278:0.019	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	MCM3AP	HGNC	ENSG00000160294				211	0	0	127	15	10.5634
PCNT	0	genome.wustl.edu	37	21	47831672	47831673	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	21	47831672	47831673	-	T	INS	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	frame_shift_ins	c.5685_5686	p.L1895fs	0.002:0.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299				39	0	0	39	17	30.3571
GNAZ	0	genome.wustl.edu	37	22	23438488	23438488	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	23438488	23438488	G	-	DEL	GNAZ	ENST00000248996	human	ensembl	74_37	+1	known	frame_shift_del	c.606	p.Q205fs	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAZ	HGNC	ENSG00000128266				207	0	0	186	11	5.58376
BCR	0	genome.wustl.edu	37	22	23523816	23523816	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	23523816	23523816	G	-	DEL	BCR	ENST00000305877	human	ensembl	74_37	+1	known	frame_shift_del	c.669	p.D225fs	0.013	NULL	pfam_RhoGAP_dom,pfam_Bcr-Abl_oncoprot_oligo,pfam_DH-domain,pfam_C2_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_Bcr-Abl_oncoprot_oligo,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	BCR	HGNC	ENSG00000186716				93	0	0	74	28	27.451
DDT	0	genome.wustl.edu	37	22	24313795	24313795	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	24313795	24313795	A	-	DEL	DDT	ENST00000350608	human	ensembl	74_37	-1	known	frame_shift_del	c.302	p.F101fs	0.001	pfam_Macrophage_inhib_fac,superfamily_Tautomerase/MIF_sf	pfam_Macrophage_inhib_fac,superfamily_Tautomerase/MIF_sf	-	no_errors	DDT	HGNC	ENSG00000099977				92	0	0	46	19	29.2308
SPECC1L	0	genome.wustl.edu	37	22	24726351	24726351	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	24726351	24726351	A	-	DEL	SPECC1L	ENST00000314328	human	ensembl	74_37	+1	known	frame_shift_del	c.2348	p.N785fs	1.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_bHLH_dom,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1L	HGNC	ENSG00000100014				185	0	0	141	54	27.6923
TIMP3	0	genome.wustl.edu	37	22	33255323	33255324	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	33255323	33255324	-	C	INS	TIMP3	ENST00000266085	human	ensembl	74_37	+1	known	frame_shift_ins	c.595_596	p.D202fs	1.000:0.990	NULL	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	-	no_errors	TIMP3	HGNC	ENSG00000100234				37	0	0	32	22	40.7407
HMGXB4	0	genome.wustl.edu	37	22	35659156	35659156	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	35659156	35659156	T	-	DEL	HMGXB4	ENST00000216106	human	ensembl	74_37	+1	known	frame_shift_del	c.117	p.L41fs	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	HMGXB4	HGNC	ENSG00000100281				79	0	0	39	13	25
MKL1	0	genome.wustl.edu	37	22	40816541	40816542	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	40816541	40816542	-	G	INS	MKL1	ENST00000355630	human	ensembl	74_37	-1	known	frame_shift_ins	c.921_920	p.V308fs	0.000:0.025	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL1	HGNC	ENSG00000196588				150	0	0	106	7	6.19469
TCF20	0	genome.wustl.edu	37	22	42606574	42606575	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	42606574	42606575	-	T	INS	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	frame_shift_ins	c.4738_4737	p.Q1579fs	0.995:0.969	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207				129	0	0	58	35	37.6344
EFCAB6	0	genome.wustl.edu	37	22	43924633	43924634	+	RNA	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	43924633	43924634	-	T	INS	EFCAB6	ENST00000461800	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	EFCAB6	HGNC	ENSG00000186976				34	0	0	19	9	32.1429
MAPK12	0	genome.wustl.edu	37	22	50696732	50696733	+	Splice_Site	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	50696732	50696733	-	G	INS	MAPK12	ENST00000215659	human	ensembl	74_37	-1	known	splice_site_ins	c.256-3_256-2	e3-2	1.000:0.993	-	-	-	no_errors	MAPK12	HGNC	ENSG00000188130				103	0	0	59	19	24.359
PLXNB2	0	genome.wustl.edu	37	22	50721829	50721830	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	50721829	50721830	-	C	INS	PLXNB2	ENST00000359337	human	ensembl	74_37	-1	known	frame_shift_ins	c.2616_2615	p.V873fs	0.000:0.025	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB2	HGNC	ENSG00000196576				93	0	0	62	24	27.907
SBF1	0	genome.wustl.edu	37	22	50898756	50898756	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	22	50898756	50898756	G	-	DEL	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	frame_shift_del	c.3228	p.S1077fs	0.039	NULL	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241				115	1	0.862069	70	46	39.6552
TBC1D23	0	genome.wustl.edu	37	3	100039736	100039737	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	100039736	100039737	AA	-	DEL	TBC1D23	ENST00000394144	human	ensembl	74_37	+1	known	frame_shift_del	c.1939_1940	p.K649fs	1.000:1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_Rhodanese-like_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Rhodanese-like_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Rhodanese-like_dom	-	no_errors	TBC1D23	HGNC	ENSG00000036054				42	0	0	29	8	21.6216
ZBTB20	0	genome.wustl.edu	37	3	114058003	114058003	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	114058003	114058003	G	-	DEL	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	frame_shift_del	c.2075	p.P692fs	0.678	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				74	0	0	97	7	6.73077
PDIA5	0	genome.wustl.edu	37	3	122869089	122869089	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	122869089	122869089	C	-	DEL	PDIA5	ENST00000316218	human	ensembl	74_37	+1	known	frame_shift_del	c.1151	p.P386fs	1.000	superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,pfam_AhpC/TSA,superfamily_Thioredoxin-like_fold,prints_Thioredoxin	-	no_errors	PDIA5	HGNC	ENSG00000065485				107	1	0.925926	76	27	26.2136
SLC41A3	0	genome.wustl.edu	37	3	125725966	125725966	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	125725966	125725966	C	-	DEL	SLC41A3	ENST00000315891	human	ensembl	74_37	-1	known	frame_shift_del	c.1357	p.D453fs	1.000	pfam_SLC41_membr_dom	pfam_SLC41_membr_dom,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	SLC41A3	HGNC	ENSG00000114544				96	0	0	44	25	36.2319
CCDC37	0	genome.wustl.edu	37	3	126142183	126142183	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	126142183	126142183	C	-	DEL	CCDC37	ENST00000393425	human	ensembl	74_37	+1	known	frame_shift_del	c.1101	p.T370fs	0.000	NULL	superfamily_SuperAg_toxin_C	-	no_errors	CCDC37	HGNC	ENSG00000163885				38	0	0	26	5	16.129
PLXNA1	0	genome.wustl.edu	37	3	126735391	126735391	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	126735391	126735391	C	-	DEL	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	frame_shift_del	c.3046	p.Q1019fs	0.981	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				132	0	0	60	20	25
GATA2	0	genome.wustl.edu	37	3	128199894	128199894	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	128199894	128199894	G	-	DEL	GATA2	ENST00000341105	human	ensembl	74_37	-1	known	frame_shift_del	c.1411	p.H471fs	1.000	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA2	HGNC	ENSG00000179348				33	0	0	19	6	24
SLCO2A1	0	genome.wustl.edu	37	3	133670083	133670083	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	133670083	133670083	A	-	DEL	SLCO2A1	ENST00000310926	human	ensembl	74_37	-1	known	frame_shift_del	c.830	p.F277fs	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO2A1	HGNC	ENSG00000174640				124	1	0.8	71	37	34.2593
PPP2R3A	0	genome.wustl.edu	37	3	135720729	135720729	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	135720729	135720729	A	-	DEL	PPP2R3A	ENST00000264977	human	ensembl	74_37	+1	known	frame_shift_del	c.389	p.K131fs	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	PPP2R3A	HGNC	ENSG00000073711				58	0	0	29	17	36.9565
RASA2	0	genome.wustl.edu	37	3	141327450	141327450	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	141327450	141327450	T	-	DEL	RASA2	ENST00000452898	human	ensembl	74_37	+1	known	frame_shift_del	c.2139	p.Y715fs	0.002	pfam_Znf_Btk_motif,smart_Znf_Btk_motif,pfscan_Znf_Btk_motif,prints_Znf_Btk_motif	pfam_RasGAP,pfam_C2_dom,pfam_Pleckstrin_homology,pfam_Znf_Btk_motif,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_C2_dom,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP,prints_Znf_Btk_motif	-	no_errors	RASA2	HGNC	ENSG00000155903				110	0	0	38	23	37.7049
GK5	0	genome.wustl.edu	37	3	141923492	141923492	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	141923492	141923492	A	-	DEL	GK5	ENST00000487672	human	ensembl	74_37	-1	known	frame_shift_del	c.456	p.L153fs	0.000	NULL	pfam_Carb_kinase_FGGY_N	-	no_errors	GK5	HGNC	ENSG00000175066				44	0	0	34	15	30.6122
MBNL1	0	genome.wustl.edu	37	3	152017898	152017898	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	152017898	152017898	T	-	DEL	MBNL1	ENST00000461436	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.026	-	-	-	no_errors	MBNL1	HGNC	ENSG00000152601				13	0	0	4	20	83.3333
SMC4	0	genome.wustl.edu	37	3	160143940	160143940	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	160143940	160143940	A	-	DEL	SMC4	ENST00000344722	human	ensembl	74_37	+1	known	frame_shift_del	c.2557	p.K855fs	0.998	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase,superfamily_Chemotax_Me-accpt_rcpt_lig-bd	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810				261	0	0	158	39	19.797
WDR49	0	genome.wustl.edu	37	3	167223102	167223102	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	167223102	167223102	T	-	DEL	WDR49	ENST00000308378	human	ensembl	74_37	-1	known	frame_shift_del	c.1821	p.K607fs	0.005	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR49	HGNC	ENSG00000174776				38	0	0	30	6	16.6667
ABCC5	0	genome.wustl.edu	37	3	183665257	183665257	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	183665257	183665257	A	-	DEL	ABCC5	ENST00000334444	human	ensembl	74_37	-1	known	frame_shift_del	c.3269	p.L1090fs	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC5	HGNC	ENSG00000114770				52	0	0	38	7	15.5556
TRA2B	0	genome.wustl.edu	37	3	185641779	185641780	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	185641779	185641780	AA	-	DEL	TRA2B	ENST00000465245	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TRA2B	HGNC	ENSG00000136527				51	0	0	19	12	38.7097
DNAJB11	0	genome.wustl.edu	37	3	186293717	186293717	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	186293717	186293717	T	-	DEL	DNAJB11	ENST00000265028	human	ensembl	74_37	+1	known	frame_shift_del	c.314	p.S107fs	1.000	NULL	pfam_DnaJ_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB11	HGNC	ENSG00000090520				75	0	0	49	17	25.7576
UTS2B	0	genome.wustl.edu	37	3	190999981	190999982	+	RNA	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	190999981	190999982	-	A	INS	UTS2B	ENST00000463450	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.394:0.384	-	-	-	no_errors	UTS2B	HGNC	ENSG00000188958				27	0	0	22	6	21.4286
HRASLS	0	genome.wustl.edu	37	3	192980889	192980889	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	192980889	192980889	C	-	DEL	HRASLS	ENST00000264735	human	ensembl	74_37	+1	known	frame_shift_del	c.585	p.P197fs	0.184	pfam_LRAT-like_dom	pfam_LRAT-like_dom	-	no_errors	HRASLS	HGNC	ENSG00000127252				169	0	0	65	34	34.3434
KCNH8	0	genome.wustl.edu	37	3	19554728	19554728	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	19554728	19554728	C	-	DEL	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	frame_shift_del	c.2346	p.N785fs	0.020	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960				123	0	0	65	17	20.7317
NRROS	0	genome.wustl.edu	37	3	196388325	196388325	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	196388325	196388325	G	-	DEL	NRROS	ENST00000328557	human	ensembl	74_37	+1	known	frame_shift_del	c.1811	p.A606fs	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	NRROS	HGNC	ENSG00000174004				138	0	0	103	7	6.36364
KIAA0226	0	genome.wustl.edu	37	3	197427915	197427915	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	197427915	197427915	G	-	DEL	KIAA0226	ENST00000296343	human	ensembl	74_37	-1	known	frame_shift_del	c.830	p.P277fs	0.000	NULL	pfam_Run,smart_Run,pfscan_Run	-	no_errors	KIAA0226	HGNC	ENSG00000145016				110	0	0	67	28	29.4737
SGOL1	0	genome.wustl.edu	37	3	20212755	20212756	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	20212755	20212756	AA	-	DEL	SGOL1	ENST00000460637	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SGOL1	HGNC	ENSG00000129810				31	0	0	5	11	68.75
ULK4	0	genome.wustl.edu	37	3	41860985	41860985	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	41860985	41860985	T	-	DEL	ULK4	ENST00000301831	human	ensembl	74_37	-1	known	frame_shift_del	c.1778	p.K593fs	1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ULK4	HGNC	ENSG00000168038				89	0	0	50	16	24.2424
CELSR3	0	genome.wustl.edu	37	3	48699377	48699377	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	48699377	48699377	G	-	DEL	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	frame_shift_del	c.691	p.R231fs	0.055	NULL	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				162	0	0	98	55	35.9477
BSN	0	genome.wustl.edu	37	3	49698680	49698680	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	49698680	49698680	C	-	DEL	BSN	ENST00000296452	human	ensembl	74_37	+1	known	frame_shift_del	c.9402	p.A3136fs	0.131	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061				95	0	0	84	23	21.4953
CAMKV	0	genome.wustl.edu	37	3	49896836	49896836	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	49896836	49896836	C	-	DEL	CAMKV	ENST00000477224	human	ensembl	74_37	-1	known	frame_shift_del	c.1421	p.G474fs	0.815	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKV	HGNC	ENSG00000164076				113	0	0	66	36	35.2941
RBM6	0	genome.wustl.edu	37	3	50004794	50004794	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	50004794	50004794	A	-	DEL	RBM6	ENST00000488807	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	RBM6	HGNC	ENSG00000004534				9	0	0	13	9	40.9091
SEMA3B	0	genome.wustl.edu	37	3	50311902	50311902	+	RNA	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	50311902	50311902	G	-	DEL	SEMA3B	ENST00000316347	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SEMA3B	HGNC	ENSG00000012171				210	0	0	127	46	26.5896
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				75	0	0	28	30	51.7241
DNAH1	0	genome.wustl.edu	37	3	52402772	52402774	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	52402772	52402774	CTC	-	DEL	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	in_frame_del	c.5781_5783	p.S1929in_frame_del	0.679:0.036:0.218	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841				256	0	0	125	57	31.3187
IL17RB	0	genome.wustl.edu	37	3	53898813	53898814	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	53898813	53898814	-	C	INS	IL17RB	ENST00000288167	human	ensembl	74_37	+1	known	frame_shift_ins	c.987_988	p.I331fs	0.159:0.158	NULL	pfam_SEFIR	-	no_errors	IL17RB	HGNC	ENSG00000056736				220	0	0	79	36	31.3043
DENND6A	0	genome.wustl.edu	37	3	57614576	57614578	+	In_Frame_Del	DEL	CTA	CTA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CTA	CTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	57614576	57614578	CTA	-	DEL	DENND6A	ENST00000311128	human	ensembl	74_37	-1	known	in_frame_del	c.1657_1655	p.V552in_frame_del	1.000:1.000:1.000	pfam_Afi1_N	pfam_Afi1_N,pfam_ABL9/DENND6_dom,pfam_DENN_dom	-	no_errors	DENND6A	HGNC	ENSG00000174839				103	0	0	36	21	36.8421
PTPRG	0	genome.wustl.edu	37	3	62253484	62253484	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	62253484	62253484	A	-	DEL	PTPRG	ENST00000474889	human	ensembl	74_37	+1	known	frame_shift_del	c.2864	p.G957fs	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRG	HGNC	ENSG00000144724				152	0	0	57	29	33.7209
PRICKLE2-AS3	0	genome.wustl.edu	37	3	64184686	64184686	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	64184686	64184686	T	-	DEL	PRICKLE2-AS3	ENST00000473434	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.222	-	-	-	no_errors	PRICKLE2-AS3	HGNC	ENSG00000226017				27	0	0	15	5	25
TTLL3	0	genome.wustl.edu	37	3	9859427	9859428	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	3	9859427	9859428	-	A	INS	TTLL3	ENST00000426895	human	ensembl	74_37	+1	known	frame_shift_ins	c.843_844	p.A283fs	0.996:1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL3	HGNC	ENSG00000214021				120	0	0	72	28	28
MTTP	0	genome.wustl.edu	37	4	100496086	100496086	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	100496086	100496086	T	-	DEL	MTTP	ENST00000265517	human	ensembl	74_37	+1	known	frame_shift_del	c.20	p.L9fs	1.000	NULL	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	MTTP	HGNC	ENSG00000138823				106	0	0	72	21	22.5806
LRIT3	0	genome.wustl.edu	37	4	110791079	110791080	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	110791079	110791080	-	C	INS	LRIT3	ENST00000594814	human	ensembl	74_37	+1	known	frame_shift_ins	c.1174_1175	p.T394fs	0.000:0.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIT3	HGNC	ENSG00000183423				113	0	0	64	28	30.4348
BBS7	0	genome.wustl.edu	37	4	122754483	122754483	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	122754483	122754483	A	-	DEL	BBS7	ENST00000264499	human	ensembl	74_37	-1	known	frame_shift_del	c.1579	p.C527fs	1.000	pirsf_Bardet-Biedl_syndrome_7_prot	superfamily_WD40_repeat_dom,pirsf_Bardet-Biedl_syndrome_7_prot	-	no_errors	BBS7	HGNC	ENSG00000138686				105	0	0	40	14	25.9259
FAT4	0	genome.wustl.edu	37	4	126239830	126239830	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	126239830	126239830	A	-	DEL	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	frame_shift_del	c.2264	p.T757fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				118	0	0	70	6	7.89474
MGARP	0	genome.wustl.edu	37	4	140201256	140201256	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	140201256	140201256	G	-	DEL	MGARP	ENST00000398955	human	ensembl	74_37	-1	known	frame_shift_del	c.57	p.N20fs	0.203	NULL	NULL	-	no_errors	MGARP	HGNC	ENSG00000137463				75	0	0	30	17	36.1702
NAA15	0	genome.wustl.edu	37	4	140264085	140264086	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	140264085	140264086	-	T	INS	NAA15	ENST00000296543	human	ensembl	74_37	+1	known	frame_shift_ins	c.508_509	p.L171fs	1.000:1.000	pirsf_NatA_aux_su,pfscan_TPR-contain_dom	pfam_NatA_aux_su,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA15	HGNC	ENSG00000164134				54	0	0	26	12	31.5789
TBC1D9	0	genome.wustl.edu	37	4	141600843	141600843	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	141600843	141600843	T	-	DEL	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	frame_shift_del	c.515	p.K172fs	1.000	pfam_GRAM,smart_GRAM	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436				42	0	0	40	11	21.5686
ZNF827	0	genome.wustl.edu	37	4	146686852	146686853	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	146686852	146686853	-	G	INS	ZNF827	ENST00000508784	human	ensembl	74_37	-1	known	frame_shift_ins	c.2899_2898	p.S966fs	1.000:0.994	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF827	HGNC	ENSG00000151612				170	0	0	93	28	23.1405
POU4F2	0	genome.wustl.edu	37	4	147560292	147560294	+	In_Frame_Del	DEL	GAT	GAT	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GAT	GAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	147560292	147560294	GAT	-	DEL	POU4F2	ENST00000281321	human	ensembl	74_37	+1	known	in_frame_del	c.2_2	p.5in_frame_delMMM	1.000:1.000:1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F2	HGNC	ENSG00000151615				90	0	0	45	14	23.7288
FNIP2	0	genome.wustl.edu	37	4	159750300	159750302	+	In_Frame_Del	DEL	AGC	AGC	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AGC	AGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	159750300	159750302	AGC	-	DEL	FNIP2	ENST00000379346	human	ensembl	74_37	+1	known	in_frame_del	c.373_375	p.S128in_frame_del	0.175:0.191:0.191	NULL	NULL	-	no_errors	FNIP2	HGNC	ENSG00000052795				26	0	0	20	7	25.9259
PROM1	0	genome.wustl.edu	37	4	15995680	15995680	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	15995680	15995680	T	-	DEL	PROM1	ENST00000447510	human	ensembl	74_37	-1	known	frame_shift_del	c.1697	p.N566fs	0.415	pfam_Prominin	pfam_Prominin	-	no_errors	PROM1	HGNC	ENSG00000007062				111	1	0.892857	69	24	25.8065
GALNT7	0	genome.wustl.edu	37	4	174216904	174216904	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	174216904	174216904	T	-	DEL	GALNT7	ENST00000502407	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	GALNT7	HGNC	ENSG00000109586				51	0	0	29	15	34.0909
HPGD	0	genome.wustl.edu	37	4	175413228	175413228	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	175413228	175413228	T	-	DEL	HPGD	ENST00000296522	human	ensembl	74_37	-1	known	frame_shift_del	c.680	p.N227fs	0.925	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_Glc/ribitol_DH,prints_ADH_insect,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HPGD	HGNC	ENSG00000164120				178	0	0	83	8	8.79121
FAM193A	0	genome.wustl.edu	37	4	2698177	2698177	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	2698177	2698177	A	-	DEL	FAM193A	ENST00000324666	human	ensembl	74_37	+1	known	frame_shift_del	c.2491	p.M833fs	0.997	NULL	NULL	-	no_errors	FAM193A	HGNC	ENSG00000125386				81	0	0	52	40	43.4783
RGS12	0	genome.wustl.edu	37	4	3432431	3432431	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	3432431	3432431	C	-	DEL	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	frame_shift_del	c.3863	p.1292fs	0.000	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788				20	0	0	14	10	41.6667
KCTD8	0	genome.wustl.edu	37	4	44176881	44176881	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	44176881	44176881	T	-	DEL	KCTD8	ENST00000360029	human	ensembl	74_37	-1	known	frame_shift_del	c.1348	p.I450fs	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD8	HGNC	ENSG00000183783				151	0	0	105	9	7.89474
GABRG1	0	genome.wustl.edu	37	4	46060358	46060358	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	46060358	46060358	A	-	DEL	GABRG1	ENST00000295452	human	ensembl	74_37	-1	known	frame_shift_del	c.792	p.F264fs	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg1_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG1	HGNC	ENSG00000163285				76	0	0	50	3	5.66038
MOB1B	0	genome.wustl.edu	37	4	71844994	71844995	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	71844994	71844995	-	T	INS	MOB1B	ENST00000309395	human	ensembl	74_37	+1	known	frame_shift_ins	c.559_560	p.V190fs	1.000:1.000	pfam_Mob1_phocein,superfamily_Mob1_phocein	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB1B	HGNC	ENSG00000173542				125	0	0	78	9	10.3448
NKX6-1	0	genome.wustl.edu	37	4	85419121	85419122	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	85419121	85419122	-	G	INS	NKX6-1	ENST00000295886	human	ensembl	74_37	-1	known	frame_shift_ins	c.261_260	p.Q88fs	0.998:1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	NKX6-1	HGNC	ENSG00000163623				14	0	0	15	4	21.0526
HERC6	0	genome.wustl.edu	37	4	89349778	89349778	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	4	89349778	89349778	A	-	DEL	HERC6	ENST00000264346	human	ensembl	74_37	+1	known	frame_shift_del	c.1982	p.K663fs	0.001	superfamily_HECT	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC6	HGNC	ENSG00000138642				24	0	0	23	6	20.6897
FER	0	genome.wustl.edu	37	5	108290522	108290522	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	108290522	108290522	A	-	DEL	FER	ENST00000281092	human	ensembl	74_37	+1	known	frame_shift_del	c.1422	p.K476fs	0.994	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_SH2,smart_SH2,pfscan_SH2	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_FCH_dom,superfamily_Kinase-like_dom,smart_FCH_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,pfscan_FCH_dom,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	FER	HGNC	ENSG00000151422				98	0	0	45	24	34.7826
RAD50	0	genome.wustl.edu	37	5	131931451	131931452	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	131931451	131931452	-	A	INS	RAD50	ENST00000265335	human	ensembl	74_37	+1	known	frame_shift_ins	c.2156_2157	p.K723fs	1.000:0.997	superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	pfam_Rad50_Zn_hook,superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	-	no_errors	RAD50	HGNC	ENSG00000113522				116	0	0	33	21	38.8889
AFF4	0	genome.wustl.edu	37	5	132232258	132232258	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	132232258	132232258	A	-	DEL	AFF4	ENST00000265343	human	ensembl	74_37	-1	known	frame_shift_del	c.2064	p.R689fs	0.994	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF4	HGNC	ENSG00000072364				146	0	0	74	14	15.9091
UBE2B	0	genome.wustl.edu	37	5	133707248	133707248	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	133707248	133707248	T	-	DEL	UBE2B	ENST00000511807	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UBE2B	HGNC	ENSG00000119048				36	0	0	11	17	60.7143
EGR1	0	genome.wustl.edu	37	5	137802677	137802682	+	In_Frame_Del	DEL	CCTCCG	CCTCCG	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CCTCCG	CCTCCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	137802677	137802682	CCTCCG	-	DEL	EGR1	ENST00000239938	human	ensembl	74_37	+1	known	in_frame_del	c.539_544	p.AS184in_frame_del	1.000:0.824:0.988:0.993:0.303:0.993	pfam_DUF3446	pfam_DUF3432,pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR1	HGNC	ENSG00000120738				313	0	0	183	63	25.6098
PSD2	0	genome.wustl.edu	37	5	139193288	139193288	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	139193288	139193288	G	-	DEL	PSD2	ENST00000274710	human	ensembl	74_37	+1	known	frame_shift_del	c.766	p.D258fs	0.076	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD2	HGNC	ENSG00000146005				31	0	0	28	11	28.2051
SLC25A2	0	genome.wustl.edu	37	5	140682547	140682549	+	In_Frame_Del	DEL	TCA	TCA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	TCA	TCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	140682547	140682549	TCA	-	DEL	SLC25A2	ENST00000239451	human	ensembl	74_37	-1	known	in_frame_del	c.886_884	p.M295in_frame_del	0.755:1.000:1.000	pfam_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A2	HGNC	ENSG00000120329				59	0	0	41	4	8.88889
TRIO	0	genome.wustl.edu	37	5	14488155	14488156	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	14488155	14488156	-	CC	INS	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	frame_shift_ins	c.7418_7419	p.S2476fs	0.023:0.021	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382				40	0	0	11	4	26.6667
TCERG1	0	genome.wustl.edu	37	5	145883505	145883506	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	145883505	145883506	GA	-	DEL	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	frame_shift_del	c.2666_2667	p.E892fs	1.000:0.891	superfamily_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649				91	0	0	80	12	13.0435
ZNF300P1	0	genome.wustl.edu	37	5	150310723	150310723	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	150310723	150310723	T	-	DEL	ZNF300P1	ENST00000520773	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.111	-	-	-	no_errors	ZNF300P1	HGNC	ENSG00000197083				20	0	0	27	6	18.1818
EBF1	0	genome.wustl.edu	37	5	158526597	158526597	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	158526597	158526597	T	-	DEL	EBF1	ENST00000518836	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.941	-	-	-	no_errors	EBF1	HGNC	ENSG00000164330				19	0	0	9	9	50
CREBRF	0	genome.wustl.edu	37	5	172517887	172517887	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	172517887	172517887	A	-	DEL	CREBRF	ENST00000540014	human	ensembl	74_37	+1	known	frame_shift_del	c.705	p.K237fs	0.141	NULL	NULL	-	no_errors	CREBRF	HGNC	ENSG00000164463				74	0	0	32	25	43.8596
LOC101928649	0	genome.wustl.edu	37	5	180684515	180684516	+	RNA	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	180684515	180684516	-	T	INS	LOC101928649	ENST00000417281	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.030:0.042	-	-	-	no_errors	CTC-338M12.4	Clone_based_vega_gene	ENSG00000233937				42	0	0	18	5	21.7391
CDH6	0	genome.wustl.edu	37	5	31322962	31322962	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	31322962	31322962	A	-	DEL	CDH6	ENST00000265071	human	ensembl	74_37	+1	known	frame_shift_del	c.1920	p.E643fs	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH6	HGNC	ENSG00000113361				97	0	0	53	27	33.75
ZFR	0	genome.wustl.edu	37	5	32404161	32404161	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	32404161	32404161	T	-	DEL	ZFR	ENST00000265069	human	ensembl	74_37	-1	known	frame_shift_del	c.1074	p.E359fs	1.000	smart_Znf_U1	pfam_DZF,pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR	HGNC	ENSG00000056097				102	0	0	55	29	34.5238
SPEF2	0	genome.wustl.edu	37	5	35705894	35705894	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	35705894	35705894	A	-	DEL	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	frame_shift_del	c.2649	p.K886fs	0.129	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582				24	0	0	7	5	41.6667
RICTOR	0	genome.wustl.edu	37	5	38954826	38954826	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	38954826	38954826	T	-	DEL	RICTOR	ENST00000503698	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RICTOR	HGNC	ENSG00000164327				43	0	0	18	6	25
C6	0	genome.wustl.edu	37	5	41181560	41181560	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	41181560	41181560	C	-	DEL	C6	ENST00000263413	human	ensembl	74_37	-1	known	frame_shift_del	c.828	p.S277fs	0.000	NULL	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_Thrombospondin_1_rpt,pfam_LDrepeatLR_classA_rpt,pfam_Kazal_dom,superfamily_Sushi_SCR_CCP,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,prints_MAC_perforin,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt	-	no_errors	C6	HGNC	ENSG00000039537				74	0	0	28	13	31.7073
FBXO4	0	genome.wustl.edu	37	5	41929871	41929871	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	41929871	41929871	T	-	DEL	FBXO4	ENST00000281623	human	ensembl	74_37	+1	known	frame_shift_del	c.498	p.L168fs	0.899	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO4	HGNC	ENSG00000151876				150	1	0.662252	76	38	33.3333
ADAMTS16	0	genome.wustl.edu	37	5	5306781	5306781	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	5306781	5306781	C	-	DEL	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	frame_shift_del	c.3351	p.P1119fs	0.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536				47	0	0	31	8	20.5128
GPX8	0	genome.wustl.edu	37	5	54460113	54460113	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	54460113	54460113	T	-	DEL	GPX8	ENST00000506123	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPX8	HGNC	ENSG00000164294				20	0	0	6	6	50
ACTBL2	0	genome.wustl.edu	37	5	56778406	56778407	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	56778406	56778407	-	C	INS	ACTBL2	ENST00000423391	human	ensembl	74_37	-1	known	frame_shift_ins	c.129_128	p.V44fs	0.988:1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTBL2	HGNC	ENSG00000169067				46	0	0	32	19	37.2549
PLK2	0	genome.wustl.edu	37	5	57753012	57753012	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	57753012	57753012	A	-	DEL	PLK2	ENST00000274289	human	ensembl	74_37	-1	known	frame_shift_del	c.1004	p.L335fs	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK2	HGNC	ENSG00000145632				48	0	0	34	11	24.4444
GCNT4	0	genome.wustl.edu	37	5	74324982	74324983	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	74324982	74324983	-	G	INS	GCNT4	ENST00000322348	human	ensembl	74_37	-1	known	frame_shift_ins	c.881_880	p.H294fs	0.920:0.913	pfam_Glyco_trans_14	pfam_Glyco_trans_14	-	no_errors	GCNT4	HGNC	ENSG00000176928				81	0	0	41	13	24.0741
EDIL3	0	genome.wustl.edu	37	5	83360606	83360607	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	83360606	83360607	-	G	INS	EDIL3	ENST00000296591	human	ensembl	74_37	-1	known	frame_shift_ins	c.865_864	p.I288fs	0.998:0.618	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC	ENSG00000164176				89	0	0	50	20	28.5714
CETN3	0	genome.wustl.edu	37	5	89701581	89701581	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	89701581	89701581	T	-	DEL	CETN3	ENST00000283122	human	ensembl	74_37	-1	known	frame_shift_del	c.189	p.A64fs	1.000	pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CETN3	HGNC	ENSG00000153140				92	0	0	38	8	17.3913
MCTP1	0	genome.wustl.edu	37	5	94620067	94620067	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	94620067	94620067	C	-	DEL	MCTP1	ENST00000515393	human	ensembl	74_37	-1	known	frame_shift_del	c.213	p.S72fs	0.000	NULL	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_C2_dom	-	no_errors	MCTP1	HGNC	ENSG00000175471				28	0	0	18	14	43.75
CAST	0	genome.wustl.edu	37	5	96065370	96065370	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	5	96065370	96065370	A	-	DEL	CAST	ENST00000395813	human	ensembl	74_37	+1	known	frame_shift_del	c.490	p.A166fs	0.735	NULL	pfam_Prot_inh_calpain	-	no_errors	CAST	HGNC	ENSG00000153113				77	0	0	20	4	16.6667
KIAA1919	0	genome.wustl.edu	37	6	111587480	111587480	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	111587480	111587480	T	-	DEL	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	frame_shift_del	c.715	p.Y241fs	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214				49	0	0	41	17	29.3103
REV3L	0	genome.wustl.edu	37	6	111726819	111726819	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	111726819	111726819	A	-	DEL	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	frame_shift_del	c.419	p.L140fs	1.000	pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413				124	0	0	54	26	32.5
HIVEP1	0	genome.wustl.edu	37	6	12164369	12164370	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	12164369	12164370	-	A	INS	HIVEP1	ENST00000379388	human	ensembl	74_37	+1	known	frame_shift_ins	c.7832_7833	p.V2614fs	0.000:0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP1	HGNC	ENSG00000095951				86	0	0	46	30	39.4737
SAMD3	0	genome.wustl.edu	37	6	130467187	130467188	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	130467187	130467188	-	T	INS	SAMD3	ENST00000368134	human	ensembl	74_37	-1	known	frame_shift_ins	c.1163_1162	p.M388fs	1.000:0.980	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD3	HGNC	ENSG00000164483				52	0	0	29	13	30.9524
AKAP7	0	genome.wustl.edu	37	6	131481276	131481276	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	131481276	131481276	A	-	DEL	AKAP7	ENST00000368123	human	ensembl	74_37	+1	known	frame_shift_del	c.163	p.K57fs	0.449	pfam_Kinase-A_anchor_nucl_local_sig	pfam_Kinase-A_anchor_nucl_local_sig,pfam_Kinase-A_anchor_RI-RII-bd_dom,superfamily_RNA_ligase/cNuc_Pdiesterase	-	no_errors	AKAP7	HGNC	ENSG00000118507				79	0	0	25	14	35.8974
MED23	0	genome.wustl.edu	37	6	131919846	131919846	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	131919846	131919846	T	-	DEL	MED23	ENST00000368058	human	ensembl	74_37	-1	known	frame_shift_del	c.2294	p.N765fs	1.000	pfam_Mediator_Med23	pfam_Mediator_Med23	-	no_errors	MED23	HGNC	ENSG00000112282				108	0	0	65	24	26.9663
SIRT5	0	genome.wustl.edu	37	6	13588582	13588583	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	13588582	13588583	-	T	INS	SIRT5	ENST00000606117	human	ensembl	74_37	+1	known	frame_shift_ins	c.135_136	p.A47fs	0.016:0.000	pfscan_Ssirtuin_cat_dom	pfam_Sirtuin,pfscan_Ssirtuin_cat_dom	-	no_errors	SIRT5	HGNC	ENSG00000124523				110	1	0.900901	39	24	38.0952
SHPRH	0	genome.wustl.edu	37	6	146264833	146264834	+	In_Frame_Ins	INS	-	-	ATC			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	146264833	146264834	-	ATC	INS	SHPRH	ENST00000367503	human	ensembl	74_37	-1	known	in_frame_ins	c.1684_1683	p.561in_frame_insD	0.742:0.156	superfamily_P-loop_NTPase,smart_Helicase_ATP-bd	pfam_SNF2_N,pfam_Histone_H1/H5_H15,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,superfamily_WW_dom,smart_Helicase_ATP-bd,smart_Histone_H1/H5_H15,smart_Znf_PHD,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_C	-	no_errors	SHPRH	HGNC	ENSG00000146414				95	0	0	69	25	26.5957
IGF2R	0	genome.wustl.edu	37	6	160485488	160485488	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	160485488	160485488	G	-	DEL	IGF2R	ENST00000356956	human	ensembl	74_37	+1	known	frame_shift_del	c.3942	p.D1317fs	0.125	pfam_CIMR,superfamily_Man6P_isomerase_rcpt-bd_dom	pfam_CIMR,pfam_FN_type2_col-bd,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	-	no_errors	IGF2R	HGNC	ENSG00000197081				217	0	0	161	58	26.484
GPLD1	0	genome.wustl.edu	37	6	24436940	24436941	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	24436940	24436941	-	G	INS	GPLD1	ENST00000230036	human	ensembl	74_37	-1	known	frame_shift_ins	c.2222_2221	p.L741fs	1.000:0.976	smart_Int_alpha_beta-p,prints_Gprt_PLipase_D	pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Gprt_PLipase_D	-	no_errors	GPLD1	HGNC	ENSG00000112293				103	0	0	51	12	19.0476
BTN3A1	0	genome.wustl.edu	37	6	26413605	26413605	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	26413605	26413605	A	-	DEL	BTN3A1	ENST00000289361	human	ensembl	74_37	+1	known	frame_shift_del	c.1227	p.I409fs	0.009	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTN3A1	HGNC	ENSG00000026950				141	0	0	69	54	43.9024
PRSS16	0	genome.wustl.edu	37	6	27218823	27218823	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	27218823	27218823	C	-	DEL	PRSS16	ENST00000230582	human	ensembl	74_37	+1	known	frame_shift_del	c.594	p.H200fs	0.997	pfam_Peptidase_S28	pfam_Peptidase_S28	-	no_errors	PRSS16	HGNC	ENSG00000112812				173	0	0	99	25	20.1613
MYLK4	0	genome.wustl.edu	37	6	2749454	2749454	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	2749454	2749454	A	-	DEL	MYLK4	ENST00000268446	human	ensembl	74_37	-1	known	frame_shift_del	c.75	p.Q26fs	0.985	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MYLK4	HGNC	ENSG00000145949				168	0	0	92	34	26.9841
HLA-A	0	genome.wustl.edu	37	6	29910371	29910372	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	29910371	29910372	-	G	INS	HLA-A	ENST00000376806	human	ensembl	74_37	+1	known	frame_shift_ins	c.41_42	p.A16fs	0.000:0.000	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-A	HGNC	ENSG00000206503				81	0	0	61	12	16.4384
HLA-J	0	genome.wustl.edu	37	6	29975967	29975967	+	RNA	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	29975967	29975967	C	-	DEL	HLA-J	ENST00000462773	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	HLA-J	HGNC	ENSG00000204622				19	0	0	21	6	22.2222
NFKBIL1	0	genome.wustl.edu	37	6	31515484	31515485	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	31515484	31515485	-	C	INS	NFKBIL1	ENST00000376148	human	ensembl	74_37	+1	known	frame_shift_ins	c.13_14	p.Q7fs	1.000:1.000	NULL	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	NFKBIL1	HGNC	ENSG00000204498				37	0	0	19	5	20.8333
ATF6B	0	genome.wustl.edu	37	6	32095989	32095989	+	RNA	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	32095989	32095989	C	-	DEL	ATF6B	ENST00000468502	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.565	-	-	-	no_errors	ATF6B	HGNC	ENSG00000213676				42	0	0	26	16	38.0952
FKBPL	0	genome.wustl.edu	37	6	32097085	32097086	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	32097085	32097086	-	C	INS	FKBPL	ENST00000375156	human	ensembl	74_37	-1	known	frame_shift_ins	c.473_472	p.E158fs	0.952:0.986	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	FKBPL	HGNC	ENSG00000204315				444	0	0	394	27	6.4133
STK38	0	genome.wustl.edu	37	6	36465582	36465583	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	36465582	36465583	-	A	INS	STK38	ENST00000229812	human	ensembl	74_37	-1	known	frame_shift_ins	c.1147_1146	p.E382fs	1.000:1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	STK38	HGNC	ENSG00000112079				84	0	0	39	17	30.3571
C6orf89	0	genome.wustl.edu	37	6	36867370	36867371	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	36867370	36867371	-	C	INS	C6orf89	ENST00000355190	human	ensembl	74_37	+1	known	frame_shift_ins	c.171_172	p.Q60fs	0.997:0.991	NULL	NULL	-	no_errors	C6orf89	HGNC	ENSG00000198663				87	0	0	52	12	18.75
RUNX2	0	genome.wustl.edu	37	6	45296446	45296446	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	45296446	45296446	A	-	DEL	RUNX2	ENST00000352853	human	ensembl	74_37	+1	known	frame_shift_del	c.187	p.G66fs	0.983	NULL	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX2	HGNC	ENSG00000124813				62	0	0	50	22	30.5556
DST	0	genome.wustl.edu	37	6	56468020	56468021	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	56468020	56468021	-	A	INS	DST	ENST00000370754	human	ensembl	74_37	-1	known	frame_shift_ins	c.11041_11040	p.A3680fs	0.009:0.000	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				17	0	0	10	7	41.1765
PHF3	0	genome.wustl.edu	37	6	64415953	64415953	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	64415953	64415953	A	-	DEL	PHF3	ENST00000262043	human	ensembl	74_37	+1	known	frame_shift_del	c.3402	p.V1137fs	0.986	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	PHF3	HGNC	ENSG00000118482				47	0	0	27	5	15.625
BAI3	0	genome.wustl.edu	37	6	69349020	69349020	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	69349020	69349020	T	-	DEL	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	frame_shift_del	c.453	p.F153fs	0.998	pfscan_CUB_dom	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				100	0	0	53	36	40.4494
FAM135A	0	genome.wustl.edu	37	6	71269576	71269577	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	71269576	71269577	-	T	INS	FAM135A	ENST00000418814	human	ensembl	74_37	+1	known	frame_shift_ins	c.4500_4501	p.L1501fs	1.000:1.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like,pfam_LACT/PDAT_acylTrfase	-	no_errors	FAM135A	HGNC	ENSG00000082269				38	0	0	18	13	41.9355
SENP6	0	genome.wustl.edu	37	6	76369099	76369099	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	76369099	76369099	A	-	DEL	SENP6	ENST00000370014	human	ensembl	74_37	+1	known	frame_shift_del	c.672	p.K226fs	1.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP6	HGNC	ENSG00000112701				28	0	0	28	11	28.2051
TTK	0	genome.wustl.edu	37	6	80751897	80751897	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	80751897	80751897	A	-	DEL	TTK	ENST00000369798	human	ensembl	74_37	+1	known	frame_shift_del	c.2552	p.R854fs	0.102	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTK	HGNC	ENSG00000112742				85	0	0	38	22	36.6667
KIAA1009	0	genome.wustl.edu	37	6	84862599	84862600	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	84862599	84862600	-	T	INS	KIAA1009	ENST00000403245	human	ensembl	74_37	-1	known	frame_shift_ins	c.3294_3293	p.R1099fs	0.003:0.003	NULL	NULL	-	no_errors	KIAA1009	HGNC	ENSG00000135315				65	0	0	21	19	47.5
MAP3K7	0	genome.wustl.edu	37	6	91226169	91226170	+	RNA	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	91226169	91226170	-	A	INS	MAP3K7	ENST00000479630	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999:0.947	-	-	-	no_errors	MAP3K7	HGNC	ENSG00000135341				45	0	0	23	10	30.303
MMS22L	0	genome.wustl.edu	37	6	97620979	97620979	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	97620979	97620979	T	-	DEL	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	frame_shift_del	c.2799	p.V934fs	0.937	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263				78	0	0	45	22	32.8358
PNISR	0	genome.wustl.edu	37	6	99849343	99849343	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	6	99849343	99849343	T	-	DEL	PNISR	ENST00000369239	human	ensembl	74_37	-1	known	frame_shift_del	c.1491	p.E498fs	1.000	NULL	NULL	-	no_errors	PNISR	HGNC	ENSG00000132424				38	0	0	39	5	11.3636
TRIP6	0	genome.wustl.edu	37	7	100465746	100465746	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	100465746	100465746	G	-	DEL	TRIP6	ENST00000200457	human	ensembl	74_37	+1	known	frame_shift_del	c.254	p.G87fs	0.344	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	TRIP6	HGNC	ENSG00000087077				118	1	0.840336	54	22	28.9474
SRRT	0	genome.wustl.edu	37	7	100479332	100479332	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	100479332	100479332	G	-	DEL	SRRT	ENST00000388793	human	ensembl	74_37	+1	known	frame_shift_del	c.304	p.G104fs	1.000	NULL	pfam_Arsenite-R_2,pfam_DUF3546	-	no_errors	SRRT	HGNC	ENSG00000087087				66	0	0	34	18	34.6154
POLR2J	0	genome.wustl.edu	37	7	102114785	102114786	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	102114785	102114786	-	C	INS	POLR2J	ENST00000393794	human	ensembl	74_37	-1	known	frame_shift_ins	c.341_340	p.A114fs	0.000:0.000	superfamily_RBP11-like_dimer	pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer	-	no_errors	POLR2J	HGNC	ENSG00000005075				115	0	0	94	19	16.8142
GPR85	0	genome.wustl.edu	37	7	112723847	112723847	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	112723847	112723847	A	-	DEL	GPR85	ENST00000297146	human	ensembl	74_37	-1	known	frame_shift_del	c.930	p.F310fs	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR85	HGNC	ENSG00000164604				82	0	0	41	25	37.8788
FSCN3	0	genome.wustl.edu	37	7	127235626	127235626	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	127235626	127235626	C	-	DEL	FSCN3	ENST00000265825	human	ensembl	74_37	+1	known	frame_shift_del	c.410	p.R139fs	0.985	superfamily_Actin_cross-linking	pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FSCN3	HGNC	ENSG00000106328				80	0	0	91	6	6.18557
TNPO3	0	genome.wustl.edu	37	7	128658127	128658127	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	128658127	128658127	T	-	DEL	TNPO3	ENST00000393245	human	ensembl	74_37	-1	known	frame_shift_del	c.205	p.M69fs	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	-	no_errors	TNPO3	HGNC	ENSG00000064419				90	0	0	40	18	31.0345
PTN	0	genome.wustl.edu	37	7	136938377	136938377	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	136938377	136938377	T	-	DEL	PTN	ENST00000348225	human	ensembl	74_37	-1	known	frame_shift_del	c.123	p.V42fs	1.000	pfam_PTN/MK_N_dom,superfamily_PTN/MK_diS	pfam_PTN/MK_C_dom,pfam_PTN/MK_N_dom,superfamily_PTN/MK_diS,smart_Midkine_heparin-bd_GF,prints_Midkine_heparin-bd_GF	-	no_errors	PTN	HGNC	ENSG00000105894				27	0	0	16	8	33.3333
EPHA1	0	genome.wustl.edu	37	7	143096420	143096420	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	143096420	143096420	C	-	DEL	EPHA1	ENST00000275815	human	ensembl	74_37	-1	known	frame_shift_del	c.922	p.A308fs	0.045	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,superfamily_SAM/pointed,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA1	HGNC	ENSG00000146904				71	0	0	41	32	43.8356
TPK1	0	genome.wustl.edu	37	7	144463016	144463018	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	144463016	144463018	AAG	-	DEL	TPK1	ENST00000360057	human	ensembl	74_37	-1	known	in_frame_del	c.72_70	p.L24in_frame_del	0.993:1.000:1.000	superfamily_TPK_catalytic,pirsf_Thiamin_pyrophosphokinase_euk,tigrfam_Thi_PPkinase	pfam_TPK_catalytic,pfam_Thiamin_PyroPKinase_B1-bd,superfamily_TPK_catalytic,superfamily_Thiamin_PyroPKinase_B1-bd,pirsf_Thiamin_pyrophosphokinase_euk,tigrfam_Thi_PPkinase	-	no_errors	TPK1	HGNC	ENSG00000196511				135	0	0	45	23	33.8235
ZNF786	0	genome.wustl.edu	37	7	148767912	148767912	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	148767912	148767912	C	-	DEL	ZNF786	ENST00000491431	human	ensembl	74_37	-1	known	frame_shift_del	c.1952	p.C651fs	0.860	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF786	HGNC	ENSG00000197362				101	0	0	52	39	42.8571
ZNF746	0	genome.wustl.edu	37	7	149172551	149172551	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	149172551	149172551	T	-	DEL	ZNF746	ENST00000458143	human	ensembl	74_37	-1	known	frame_shift_del	c.862	p.T288fs	1.000	NULL	pfam_Znf_C2H2,pfam_DUF3669_Znf,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF746	HGNC	ENSG00000181220				149	0	0	69	46	40
CHPF2	0	genome.wustl.edu	37	7	150935382	150935383	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	150935382	150935383	-	C	INS	CHPF2	ENST00000035307	human	ensembl	74_37	+1	known	frame_shift_ins	c.1934_1935	p.S648fs	1.000:0.983	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHPF2	HGNC	ENSG00000033100				60	0	0	25	10	28.5714
XRCC2	0	genome.wustl.edu	37	7	152346219	152346220	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	152346219	152346220	-	A	INS	XRCC2	ENST00000359321	human	ensembl	74_37	-1	known	frame_shift_ins	c.351_350	p.L117fs	0.696:0.703	pfam_DNA_recomb/repair_Rad51_C,superfamily_P-loop_NTPase,pfscan_DNA_recomb_RecA/RadB_ATP-bd	pfam_DNA_recomb/repair_Rad51_C,superfamily_P-loop_NTPase,pfscan_DNA_recomb_RecA/RadB_ATP-bd	-	no_errors	XRCC2	HGNC	ENSG00000196584				92	0	0	48	31	39.2405
DNAH11	0	genome.wustl.edu	37	7	21805081	21805082	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	21805081	21805082	GA	-	DEL	DNAH11	ENST00000328843	human	ensembl	74_37	+1	known	frame_shift_del	c.8997_8998	p.R3000fs	0.995:0.992	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877				196	0	0	85	44	34.1085
CCDC126	0	genome.wustl.edu	37	7	23650855	23650855	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	23650855	23650855	T	-	DEL	CCDC126	ENST00000486109	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.020	-	-	-	no_errors	CCDC126	HGNC	ENSG00000169193				24	0	0	9	14	60.8696
CBX3	0	genome.wustl.edu	37	7	26245997	26245998	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	26245997	26245998	-	A	INS	CBX3	ENST00000337620	human	ensembl	74_37	+1	known	frame_shift_ins	c.34_35	p.G12fs	1.000:1.000	NULL	pfam_Chromo_shadow_dom,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Chromo_shadow_dom,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX3	HGNC	ENSG00000122565				47	0	0	41	5	10.8696
AVL9	0	genome.wustl.edu	37	7	32584334	32584334	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	32584334	32584334	A	-	DEL	AVL9	ENST00000404479	human	ensembl	74_37	+1	known	frame_shift_del	c.243	p.N82fs	1.000	pfam_ABL9/DENND6_dom,pfam_DUF2347	pfam_ABL9/DENND6_dom,pfam_DUF2347	-	no_errors	AVL9	HGNC	ENSG00000105778				46	0	0	24	3	11.1111
INHBA	0	genome.wustl.edu	37	7	41729727	41729727	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	41729727	41729727	C	-	DEL	INHBA	ENST00000242208	human	ensembl	74_37	-1	known	frame_shift_del	c.802	p.E268fs	0.981	pfam_TGF-b_N,prints_Inhibin_betaA	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaA,prints_Inhibin_asu	-	no_errors	INHBA	HGNC	ENSG00000122641				45	0	0	48	24	33.3333
RADIL	0	genome.wustl.edu	37	7	4841483	4841484	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	4841483	4841484	-	G	INS	RADIL	ENST00000399583	human	ensembl	74_37	-1	known	frame_shift_ins	c.2643_2642	p.G882fs	0.000:0.001	NULL	pfam_Dil_domain,pfam_Ras-assoc,pfam_PDZ,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	RADIL	HGNC	ENSG00000157927				12	0	0	13	5	27.7778
ACTB	0	genome.wustl.edu	37	7	5568907	5568915	+	In_Frame_Del	DEL	TCCATGTCG	TCCATGTCG	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	TCCATGTCG	TCCATGTCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	5568907	5568915	TCCATGTCG	-	DEL	ACTB	ENST00000331789	human	ensembl	74_37	-1	known	in_frame_del	c.248_240	p.DDM80in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.997	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTB	HGNC	ENSG00000075624				105	0	0	86	37	30.0813
EIF2AK1	0	genome.wustl.edu	37	7	6085740	6085740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	6085740	6085740	T	-	DEL	EIF2AK1	ENST00000199389	human	ensembl	74_37	-1	known	frame_shift_del	c.592	p.I198fs	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK1	HGNC	ENSG00000086232				40	0	0	19	2	9.52381
SAMD9L	0	genome.wustl.edu	37	7	92764982	92764982	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	7	92764982	92764982	C	-	DEL	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	frame_shift_del	c.303	p.N103fs	0.000	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409				131	0	0	85	28	24.7788
VPS13B	0	genome.wustl.edu	37	8	100050671	100050671	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	100050671	100050671	T	-	DEL	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	frame_shift_del	c.168	p.L58fs	0.024	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				29	0	0	30	12	28.5714
RGS22	0	genome.wustl.edu	37	8	100990176	100990176	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	100990176	100990176	A	-	DEL	RGS22	ENST00000360863	human	ensembl	74_37	-1	known	frame_shift_del	c.3488	p.L1163fs	0.000	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	RGS22	HGNC	ENSG00000132554				61	0	0	55	10	15.3846
RNF19A	0	genome.wustl.edu	37	8	101300216	101300216	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	101300216	101300216	T	-	DEL	RNF19A	ENST00000341084	human	ensembl	74_37	-1	known	frame_shift_del	c.187	p.R63fs	1.000	NULL	pfam_Znf_C6HC,smart_Znf_RING,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	RNF19A	HGNC	ENSG00000034677				85	0	0	68	24	26.087
UBR5	0	genome.wustl.edu	37	8	103289349	103289349	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	103289349	103289349	T	-	DEL	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	frame_shift_del	c.6360	p.E2121fs	0.987	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				127	0	0	94	42	30.8824
CSMD3	0	genome.wustl.edu	37	8	113241029	113241029	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	113241029	113241029	A	-	DEL	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	frame_shift_del	c.10920	p.F3640fs	1.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				84	0	0	75	17	18.4783
SLC30A8	0	genome.wustl.edu	37	8	118183315	118183315	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	118183315	118183315	T	-	DEL	SLC30A8	ENST00000456015	human	ensembl	74_37	+1	known	frame_shift_del	c.872	p.L292fs	0.049	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A8	HGNC	ENSG00000164756				134	0	0	128	7	5.18519
DEFB135	0	genome.wustl.edu	37	8	11842012	11842012	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	11842012	11842012	A	-	DEL	DEFB135	ENST00000382208	human	ensembl	74_37	+1	known	frame_shift_del	c.147	p.N51fs	0.000	NULL	NULL	-	no_errors	DEFB135	HGNC	ENSG00000205883				97	0	0	32	25	43.8596
SQLE	0	genome.wustl.edu	37	8	126011893	126011893	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	126011893	126011893	C	-	DEL	SQLE	ENST00000265896	human	ensembl	74_37	+1	known	frame_shift_del	c.248	p.P85fs	0.028	NULL	pfam_Squalene_epoxidase,pfam_mOase_FAD-bd,pfam_Pyr_OxRdtase_NAD-bd_dom,prints_Rng_hydrolase-like	-	no_errors	SQLE	HGNC	ENSG00000104549				47	0	0	66	12	15.3846
POU5F1B	0	genome.wustl.edu	37	8	128428462	128428462	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	128428462	128428462	C	-	DEL	POU5F1B	ENST00000391675	human	ensembl	74_37	+1	known	frame_shift_del	c.351	p.P119fs	0.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU5F1B	HGNC	ENSG00000212993				45	0	0	60	13	17.8082
PTK2	0	genome.wustl.edu	37	8	141754889	141754890	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	141754889	141754890	AA	-	DEL	PTK2	ENST00000518509	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.004	-	-	-	no_errors	PTK2	HGNC	ENSG00000169398				34	0	0	11	9	45
ZC3H3	0	genome.wustl.edu	37	8	144621235	144621235	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	144621235	144621235	C	-	DEL	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	frame_shift_del	c.302	p.G101fs	0.073	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164				157	0	0	196	32	14.0351
EPPK1	0	genome.wustl.edu	37	8	144941378	144941378	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	144941378	144941378	C	-	DEL	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	frame_shift_del	c.6044	p.G2015fs	0.996	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				55	0	0	64	20	23.8095
DGAT1	0	genome.wustl.edu	37	8	145541487	145541488	+	Splice_Site	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	145541487	145541488	-	G	INS	DGAT1	ENST00000332324	human	ensembl	74_37	-1	known	splice_site_ins	c.856-3_856-2	e10-2	0.999:0.543	-	-	-	no_errors	DGAT1	HGNC	ENSG00000185000				24	0	0	37	7	15.9091
ADCK5	0	genome.wustl.edu	37	8	145616391	145616391	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	145616391	145616391	T	-	DEL	ADCK5	ENST00000308860	human	ensembl	74_37	+1	known	frame_shift_del	c.601	p.F201fs	1.000	pfam_UbiB_dom,superfamily_Kinase-like_dom	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK5	HGNC	ENSG00000173137				94	0	0	175	18	9.32642
ARHGAP39	0	genome.wustl.edu	37	8	145773476	145773476	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	145773476	145773476	C	-	DEL	ARHGAP39	ENST00000377307	human	ensembl	74_37	-1	known	frame_shift_del	c.994	p.V332fs	1.000	NULL	pfam_RhoGAP_dom,pfam_MyTH4_dom,superfamily_Rho_GTPase_activation_prot,superfamily_WW_dom,smart_WW_dom,smart_MyTH4_dom,smart_RhoGAP_dom,pfscan_MyTH4_dom,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP39	HGNC	ENSG00000147799				115	0	0	95	20	17.3913
ZNF517	0	genome.wustl.edu	37	8	146029087	146029087	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	146029087	146029087	C	-	DEL	ZNF517	ENST00000359971	human	ensembl	74_37	+1	known	frame_shift_del	c.95	p.D34fs	0.010	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF517	HGNC	ENSG00000197363				132	0	0	170	21	10.9948
MTUS1	0	genome.wustl.edu	37	8	17504627	17504627	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	17504627	17504627	A	-	DEL	MTUS1	ENST00000518889	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	MTUS1	HGNC	ENSG00000129422				34	0	0	15	16	51.6129
CSGALNACT1	0	genome.wustl.edu	37	8	19363162	19363163	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	19363162	19363163	-	A	INS	CSGALNACT1	ENST00000311540	human	ensembl	74_37	-1	known	frame_shift_ins	c.184_183	p.Q61fs	1.000:0.998	NULL	pfam_Chond_GalNAc	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408				66	0	0	35	23	39.6552
CCAR2	0	genome.wustl.edu	37	8	22472975	22472975	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	22472975	22472975	C	-	DEL	CCAR2	ENST00000308511	human	ensembl	74_37	+1	known	frame_shift_del	c.1243	p.R417fs	1.000	NULL	superfamily_NA-bd_OB-fold	-	no_errors	CCAR2	HGNC	ENSG00000158941				197	1	0.505051	139	59	29.798
ATP6V1H	0	genome.wustl.edu	37	8	54742095	54742096	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	54742095	54742096	-	A	INS	ATP6V1H	ENST00000359530	human	ensembl	74_37	-1	known	splice_site_ins	c.217-3_217-2	e3-2	0.998:0.112	-	-	-	no_errors	ATP6V1H	HGNC	ENSG00000047249				55	0	0	26	3	10.3448
MYBL1	0	genome.wustl.edu	37	8	67488452	67488453	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	67488452	67488453	-	T	INS	MYBL1	ENST00000522677	human	ensembl	74_37	-1	known	frame_shift_ins	c.1260_1259	p.N420fs	0.967:0.992	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697				228	1	0.436681	142	27	15.9763
ARFGEF1	0	genome.wustl.edu	37	8	68128855	68128856	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	68128855	68128856	-	G	INS	ARFGEF1	ENST00000262215	human	ensembl	74_37	-1	known	frame_shift_ins	c.4656_4655	p.P1553fs	0.000:0.000	NULL	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF1	HGNC	ENSG00000066777				107	0	0	44	8	15.3846
ZFHX4	0	genome.wustl.edu	37	8	77767554	77767554	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	77767554	77767554	T	-	DEL	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	frame_shift_del	c.8397	p.F2800fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				56	0	0	90	17	15.8879
SGK223	0	genome.wustl.edu	37	8	8197109	8197109	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	8197109	8197109	T	-	DEL	SGK223	ENST00000330777	human	ensembl	74_37	-1	known	frame_shift_del	c.2199	p.V734fs	0.977	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	SGK223	Uniprot_gn	ENSG00000182319				116	0	0	92	6	6.12245
RALYL	0	genome.wustl.edu	37	8	85774620	85774620	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	85774620	85774620	G	-	DEL	RALYL	ENST00000521268	human	ensembl	74_37	+1	known	frame_shift_del	c.503	p.G171fs	1.000	pirsf_hnRNP_C_Raly	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	RALYL	HGNC	ENSG00000184672				38	0	0	53	8	13.1148
TMEM67	0	genome.wustl.edu	37	8	94828723	94828723	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	94828723	94828723	A	-	DEL	TMEM67	ENST00000463467	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.614	-	-	-	no_errors	TMEM67	HGNC	ENSG00000164953				21	0	0	30	8	21.0526
KIAA1429	0	genome.wustl.edu	37	8	95523658	95523658	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	95523658	95523658	G	-	DEL	KIAA1429	ENST00000297591	human	ensembl	74_37	-1	known	frame_shift_del	c.3145	p.L1049fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944				46	0	0	80	17	17.5258
CPQ	0	genome.wustl.edu	37	8	97797118	97797118	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	97797118	97797118	A	-	DEL	CPQ	ENST00000525310	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CPQ	HGNC	ENSG00000104324				65	0	0	72	13	15.2941
SNORA72	0	genome.wustl.edu	37	8	99054504	99054504	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	8	99054504	99054504	T	-	DEL	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970				18	0	0	9	8	47.0588
C9orf84	0	genome.wustl.edu	37	9	114484808	114484808	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	114484808	114484808	T	-	DEL	C9orf84	ENST00000318737	human	ensembl	74_37	-1	known	frame_shift_del	c.1820	p.N607fs	0.358	NULL	superfamily_RuvA_2-like	-	no_errors	C9orf84	HGNC	ENSG00000165181				96	0	0	50	28	35.8974
UGCG	0	genome.wustl.edu	37	9	114695180	114695180	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	114695180	114695180	T	-	DEL	UGCG	ENST00000374279	human	ensembl	74_37	+1	known	frame_shift_del	c.1088	p.L365fs	1.000	NULL	pfam_Glyco_trans_2	-	no_errors	UGCG	HGNC	ENSG00000148154				139	0	0	61	12	16.4384
GSN	0	genome.wustl.edu	37	9	124074857	124074857	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	124074857	124074857	A	-	DEL	GSN	ENST00000485767	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GSN	HGNC	ENSG00000148180				8	0	0	8	9	52.9412
GSN	0	genome.wustl.edu	37	9	124093751	124093751	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	124093751	124093751	G	-	DEL	GSN	ENST00000373807	human	ensembl	74_37	+1	novel	frame_shift_del	c.1397	p.E468fs	0.001	smart_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	GSN	HGNC	ENSG00000148180				8	0	0	10	4	28.5714
C9orf78	0	genome.wustl.edu	37	9	132595850	132595850	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	132595850	132595850	T	-	DEL	C9orf78	ENST00000461762	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819				49	0	0	23	21	47.7273
C9orf78	0	genome.wustl.edu	37	9	132596001	132596001	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	132596001	132596001	A	-	DEL	C9orf78	ENST00000461762	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.115	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819				29	0	0	20	3	13.0435
ABL1	0	genome.wustl.edu	37	9	133748246	133748246	+	Splice_Site	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	133748246	133748246	G	-	DEL	ABL1	ENST00000372348	human	ensembl	74_37	+1	known	splice_site_del	c.965-1	e6-1	1.000	-	-	-	no_errors	ABL1	HGNC	ENSG00000097007				169	0	0	69	13	15.8537
FAM78A	0	genome.wustl.edu	37	9	134151346	134151347	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	134151346	134151347	-	G	INS	FAM78A	ENST00000372271	human	ensembl	74_37	-1	known	frame_shift_ins	c.221_220	p.Q74fs	1.000:1.000	NULL	NULL	-	no_errors	FAM78A	HGNC	ENSG00000126882				72	0	0	53	32	37.6471
RALGDS	0	genome.wustl.edu	37	9	135984104	135984106	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	135984104	135984106	AGG	-	DEL	RALGDS	ENST00000542690	human	ensembl	74_37	-1	known	in_frame_del	c.947_945	p.L316in_frame_del	1.000:1.000:0.998	superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RALGDS	HGNC	ENSG00000160271				73	0	0	40	6	13.0435
NOL6	0	genome.wustl.edu	37	9	33464082	33464082	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	33464082	33464082	G	-	DEL	NOL6	ENST00000297990	human	ensembl	74_37	-1	known	frame_shift_del	c.2857	p.Q953fs	1.000	pfam_Nrap	pfam_Nrap	-	no_errors	NOL6	HGNC	ENSG00000165271				178	0	0	105	41	28.0822
DCAF12	0	genome.wustl.edu	37	9	34125105	34125106	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	34125105	34125106	CT	-	DEL	DCAF12	ENST00000361264	human	ensembl	74_37	-1	known	frame_shift_del	c.249_248	p.E83fs	0.996:1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12	HGNC	ENSG00000198876				83	0	0	36	20	35.7143
PIGO	0	genome.wustl.edu	37	9	35091693	35091693	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	35091693	35091693	G	-	DEL	PIGO	ENST00000341666	human	ensembl	74_37	-1	known	frame_shift_del	c.2191	p.R731fs	0.180	NULL	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	PIGO	HGNC	ENSG00000165282				78	0	0	57	19	25
DOCK8	0	genome.wustl.edu	37	9	405015	405015	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	405015	405015	T	-	DEL	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	frame_shift_del	c.3332	p.F1113fs	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099				59	0	0	18	13	41.9355
SPATA31A3	0	genome.wustl.edu	37	9	40705863	40705864	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	40705863	40705864	-	T	INS	SPATA31A3	ENST00000356699	human	ensembl	74_37	+1	known	frame_shift_ins	c.3520_3521	p.S1176fs	0.000:0.007	NULL	NULL	-	no_errors	SPATA31A3	HGNC	ENSG00000147926				153	0	0	146	8	5.19481
CDC37L1	0	genome.wustl.edu	37	9	4688589	4688589	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	4688589	4688589	A	-	DEL	CDC37L1	ENST00000381854	human	ensembl	74_37	+1	known	frame_shift_del	c.491	p.I166fs	1.000	pfam_Cdc37_Hsp90-bd	pfam_Cdc37_Hsp90-bd	-	no_errors	CDC37L1	HGNC	ENSG00000106993				26	0	0	1	3	75
ANKRD20A4	0	genome.wustl.edu	37	9	69421905	69421905	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	69421905	69421905	A	-	DEL	ANKRD20A4	ENST00000357336	human	ensembl	74_37	+1	known	frame_shift_del	c.1369	p.N459fs	0.373	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD20A4	HGNC	ENSG00000172014				53	0	0	28	6	17.6471
PRKACG	0	genome.wustl.edu	37	9	71628079	71628081	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	71628079	71628081	CTT	-	DEL	PRKACG	ENST00000377276	human	ensembl	74_37	-1	known	in_frame_del	c.930_928	p.K310in_frame_del	1.000:1.000:1.000	superfamily_Kinase-like_dom,smart_AGC-kinase_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACG	HGNC	ENSG00000165059				124	0	0	69	36	34.2857
SMC5	0	genome.wustl.edu	37	9	72962552	72962554	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	72962552	72962554	AGA	-	DEL	SMC5	ENST00000361138	human	ensembl	74_37	+1	known	in_frame_del	c.2688_2690	p.E899in_frame_del	1.000:1.000:1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	-	no_errors	SMC5	HGNC	ENSG00000198887				36	0	0	15	6	28.5714
IARS	0	genome.wustl.edu	37	9	95003101	95003101	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	9	95003101	95003101	A	-	DEL	IARS	ENST00000473915	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	IARS	HGNC	ENSG00000196305				25	0	0	1	3	75
BTK	0	genome.wustl.edu	37	X	100608076	100608076	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	100608076	100608076	A	-	DEL	BTK	ENST00000470069	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	BTK	HGNC	ENSG00000010671				56	0	0	54	3	5.26316
RNF128	0	genome.wustl.edu	37	X	105937256	105937256	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	105937256	105937256	T	-	DEL	RNF128	ENST00000324342	human	ensembl	74_37	+1	known	frame_shift_del	c.24	p.W11fs	0.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF128	HGNC	ENSG00000133135				63	0	0	26	17	39.5349
ATG4A	0	genome.wustl.edu	37	X	107395165	107395166	+	RNA	INS	-	-	A			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	107395165	107395166	-	A	INS	ATG4A	ENST00000474825	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.002:0.000	-	-	-	no_errors	ATG4A	HGNC	ENSG00000101844				25	0	0	30	11	26.8293
IRS4	0	genome.wustl.edu	37	X	107977802	107977803	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	107977802	107977803	-	C	INS	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	frame_shift_ins	c.1773_1772	p.K592fs	0.031:0.016	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124				387	1	0.257732	240	83	25.6966
SLC25A43	0	genome.wustl.edu	37	X	118587011	118587011	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	118587011	118587011	A	-	DEL	SLC25A43	ENST00000217909	human	ensembl	74_37	+1	known	frame_shift_del	c.1009	p.K338fs	0.986	NULL	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A43	HGNC	ENSG00000077713				110	0	0	57	38	40
DCAF12L1	0	genome.wustl.edu	37	X	125685311	125685311	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	125685311	125685311	A	-	DEL	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	frame_shift_del	c.1281	p.N429fs	0.867	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				243	0	0	190	11	5.47264
SMARCA1	0	genome.wustl.edu	37	X	128621084	128621084	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	128621084	128621084	T	-	DEL	SMARCA1	ENST00000371122	human	ensembl	74_37	-1	known	frame_shift_del	c.2128	p.M710fs	1.000	NULL	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038				58	0	0	29	12	29.2683
UTP14A	0	genome.wustl.edu	37	X	129055622	129055622	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	129055622	129055622	A	-	DEL	UTP14A	ENST00000498179	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	UTP14A	HGNC	ENSG00000156697				12	0	0	12	10	45.4545
MOSPD1	0	genome.wustl.edu	37	X	134033048	134033048	+	RNA	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	134033048	134033048	T	-	DEL	MOSPD1	ENST00000462060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928				78	0	0	39	14	26.4151
PASD1	0	genome.wustl.edu	37	X	150841026	150841027	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	150841026	150841027	-	T	INS	PASD1	ENST00000370357	human	ensembl	74_37	+1	known	frame_shift_ins	c.1809_1810	p.L604fs	0.000:0.000	NULL	superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PASD1	HGNC	ENSG00000166049				162	0	0	94	9	8.73786
ASB11	0	genome.wustl.edu	37	X	15333633	15333633	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	15333633	15333633	A	-	DEL	ASB11	ENST00000480796	human	ensembl	74_37	-1	known	frame_shift_del	c.95	p.L32fs	1.000	NULL	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB11	HGNC	ENSG00000165192				150	0	0	47	23	32.8571
PIR	0	genome.wustl.edu	37	X	15408208	15408208	+	RNA	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	15408208	15408208	A	-	DEL	PIR	ENST00000484433	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PIR	HGNC	ENSG00000087842				9	0	0	5	4	44.4444
F8	0	genome.wustl.edu	37	X	154158194	154158195	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	154158194	154158195	-	T	INS	F8	ENST00000360256	human	ensembl	74_37	-1	known	frame_shift_ins	c.3871_3870	p.G1290fs	0.000:0.001	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010				121	1	0.819672	84	20	19.2308
FAM47A	0	genome.wustl.edu	37	X	34150246	34150246	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	34150246	34150246	A	-	DEL	FAM47A	ENST00000346193	human	ensembl	74_37	-1	known	frame_shift_del	c.150	p.F50fs	0.002	NULL	NULL	-	no_errors	FAM47A	HGNC	ENSG00000185448				140	0	0	97	28	22.4
BCOR	0	genome.wustl.edu	37	X	39933400	39933400	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	39933400	39933400	C	-	DEL	BCOR	ENST00000378444	human	ensembl	74_37	-1	known	frame_shift_del	c.1199	p.G400fs	0.007	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337				47	0	0	26	11	29.7297
MED14	0	genome.wustl.edu	37	X	40588606	40588607	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	40588606	40588607	AA	-	DEL	MED14	ENST00000463072	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MED14	HGNC	ENSG00000180182				53	0	0	21	10	32.2581
HUWE1	0	genome.wustl.edu	37	X	53576030	53576031	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	53576030	53576031	-	C	INS	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	frame_shift_ins	c.9925_9924	p.R3308fs	0.980:0.001	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758				70	0	0	26	8	23.5294
KLF8	0	genome.wustl.edu	37	X	56292162	56292162	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	56292162	56292162	A	-	DEL	KLF8	ENST00000468660	human	ensembl	74_37	+1	known	frame_shift_del	c.631	p.N212fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF8	HGNC	ENSG00000102349				82	0	0	43	13	23.2143
RGAG4	0	genome.wustl.edu	37	X	71349748	71349748	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	71349748	71349748	G	-	DEL	RGAG4	ENST00000479991	human	ensembl	74_37	-1	known	frame_shift_del	c.1643	p.P548fs	0.055	NULL	pfam_Retrotrans_gag_dom	-	no_errors	RGAG4	HGNC	ENSG00000242732				93	0	0	42	20	32.2581
ATRX	0	genome.wustl.edu	37	X	76763680	76763681	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	76763680	76763681	AA	-	DEL	ATRX	ENST00000480283	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.001	-	-	-	no_errors	ATRX	HGNC	ENSG00000085224				11	0	0	5	7	58.3333
ATRX	0	genome.wustl.edu	37	X	76829815	76829816	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	76829815	76829816	-	C	INS	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	frame_shift_ins	c.6226_6225	p.K2075fs	1.000:0.993	superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224				191	0	0	65	14	17.7215
BRWD3	0	genome.wustl.edu	37	X	79955483	79955483	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	79955483	79955483	T	-	DEL	BRWD3	ENST00000373275	human	ensembl	74_37	-1	known	frame_shift_del	c.2916	p.K972fs	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quino_amine_DH_bsu,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD3	HGNC	ENSG00000165288				29	0	0	15	3	16.6667
CYLC1	0	genome.wustl.edu	37	X	83128981	83128981	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	83128981	83128981	A	-	DEL	CYLC1	ENST00000329312	human	ensembl	74_37	+1	known	frame_shift_del	c.1265	p.K424fs	0.000	NULL	NULL	-	no_errors	CYLC1	HGNC	ENSG00000183035				11	0	0	5	3	37.5
DIAPH2	0	genome.wustl.edu	37	X	95993621	95993621	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GT-01A-21D-A25D-08	TCGA-HU-A4GT-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	445875af-7a67-4041-bc25-07e0b5dfb66d	50fad79c-0ab5-41b5-b176-923b06f78c47	X	95993621	95993621	A	-	DEL	DIAPH2	ENST00000324765	human	ensembl	74_37	+1	known	frame_shift_del	c.202	p.E70fs	1.000	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH2	HGNC	ENSG00000147202				48	0	0	15	12	44.4444
